BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5886
(184 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|312385778|gb|EFR30197.1| hypothetical protein AND_00373 [Anopheles darlingi]
Length = 1232
Score = 135 bits (341), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 64/95 (67%), Positives = 79/95 (83%), Gaps = 2/95 (2%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEF--QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
+D GGL+S+ATVNIRVTDINDKNPEF + LPY F+V EGQ+G+A+G VHATDADEG NA
Sbjct: 475 EDNGGLASSATVNIRVTDINDKNPEFDERKLPYVFAVDEGQEGVAIGTVHATDADEGMNA 534
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ Y++P DIPF +D+ TG+IRT ALDYEKQ+ Y
Sbjct: 535 EISYTIPSDIPFRIDSRTGEIRTKLALDYEKQKEY 569
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 20/165 (12%)
Query: 22 MARDKHELGVTLMQVKATDKDSGKFGLVEYRL-------LDNNT-DAASYFNLD--PATE 71
A D+ + GV + V ATD D G + Y + +D+ T + + LD E
Sbjct: 509 FAVDEGQEGVAIGTVHATDADEGMNAEISYTIPSDIPFRIDSRTGEIRTKLALDYEKQKE 568
Query: 72 HQGPIQDEGGLS----STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATD 127
++ + + G TA+V ++V DI D+ P F E +PE AV V A D
Sbjct: 569 YKFVVTAKDGAPEPRLGTASVTVKVRDIPDEVPRFMESTVEVRIPENIPDTAVTTVRAFD 628
Query: 128 ADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D + Y++ P D+ F VDA TG I+T + LDYEK +++
Sbjct: 629 PDTKPE--ITYTLRRGPGDL-FKVDARTGQIKTIRGLDYEKDKMH 670
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 24/167 (14%)
Query: 22 MARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------- 70
MA D L + +V ATD D+ + L+ Y + + + AS F +DP T
Sbjct: 307 MAGDGRRL---VTKVHATDNDAAENALITYSIFHVSNNGASKFAIDPKTGEIETRTRLNA 363
Query: 71 --EHQGPIQ--DEGGLSSTATVNIRVT-DINDKNPEFQSLPYEFSVPEGQDGLAVGRVHA 125
++ +Q D GGLSS A V + +T N K P F YE V EG + + V
Sbjct: 364 GEQYSITVQASDVGGLSSQAIVEVTITPGPNTKPPRFAKPVYEVQVSEGAEINST--VLV 421
Query: 126 TDADEGQNAVVYYSVP--EDI-PFVVDANTGDIRTNKALDYEKQQLY 169
A++ +N V Y++ D+ F + ++G I + LD E Y
Sbjct: 422 LKAEDPENDPVSYAITTGNDLRQFSIGKDSGVISVIRKLDREDLTRY 468
>gi|345486640|ref|XP_003425515.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-15-like [Nasonia
vitripennis]
Length = 1618
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 70/93 (75%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVV 136
+D GGLSST TVNI+VTDINDKNPEF+ LPYEFSV EG+ +GRVHA DADEG NA +
Sbjct: 718 EDTGGLSSTCTVNIKVTDINDKNPEFEGLPYEFSVKEGEARKLIGRVHAEDADEGINAEI 777
Query: 137 YYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y P+DIPF VD TGD+ T ALDYE+ Y
Sbjct: 778 TYFAPDDIPFTVDPETGDVLTKLALDYEQNHEY 810
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPED 143
+TATV +RV D+ D+ P F YE SV E V V A D D + +
Sbjct: 826 ATATVTVRVIDVEDEVPIFHQSSYEASVKENVPDYMVTHVMADDPDSKKQVTYVIKQGDT 885
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLYL 170
F +D TG I+T + LDYE + ++
Sbjct: 886 DLFSIDPKTGIIKTIRGLDYETETQHI 912
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 25/112 (22%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQ--DGLAVGRVHATDADEGQNAVVYYSV-PEDI 144
V +RV+D+ND P+F + PYE +VPE V ATDAD G N +V YS+ P D
Sbjct: 163 VIVRVSDVNDNAPKFINTPYETTVPELTPVGSTIFKNVVATDADAGVNGLVEYSIAPGDG 222
Query: 145 PFVVDAN----------------------TGDIRTNKALDYEKQQLYLERVF 174
+ +++ G + N+ LDYE+ Q Y +
Sbjct: 223 TGIGNSDGVGRDRITTADGYGYFSINLPHQGQVTVNRTLDYERTQRYFVTIL 274
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 31/41 (75%), Gaps = 2/41 (4%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLL-DNNTDAAS-YFNLDPAT 70
T+++VKA DKD+GK+G +E+ L+ DN + AS +F +DP +
Sbjct: 1192 TVLEVKAHDKDNGKYGKLEFSLVFDNEHNRASDFFAIDPTS 1232
Score = 35.4 bits (80), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 77 QDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
++ GL++++ ++ VT D+ND P P +V G+ V +V ATD D+G NA
Sbjct: 514 RERSGLAASSPLSFVVTLNDVNDNAPMLPMTP-PITVQAGETKREVIKVEATDNDDGPNA 572
Query: 135 VVYYSV 140
+ YS+
Sbjct: 573 EITYSI 578
>gi|347967593|ref|XP_312660.5| AGAP002310-PA [Anopheles gambiae str. PEST]
gi|333468389|gb|EAA07876.6| AGAP002310-PA [Anopheles gambiae str. PEST]
Length = 1762
Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 77/95 (81%), Gaps = 2/95 (2%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEF--QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
+D GGL+S+ATVNI+VTDINDKNPEF + LPY F+V EG++ +++G V ATDADEG NA
Sbjct: 692 EDNGGLASSATVNIKVTDINDKNPEFDERQLPYVFAVDEGRENVSIGTVRATDADEGMNA 751
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ Y+VP DIPF +D+ TG++RT ALDYEKQ+ Y
Sbjct: 752 EITYTVPSDIPFRIDSRTGEVRTKVALDYEKQKEY 786
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 22 MARDKHELGVTLMQVKATDKDSGKFGLVEYRL-------LDNNTDAASY---FNLDPATE 71
A D+ V++ V+ATD D G + Y + +D+ T + + E
Sbjct: 726 FAVDEGRENVSIGTVRATDADEGMNAEITYTVPSDIPFRIDSRTGEVRTKVALDYEKQKE 785
Query: 72 HQGPIQDEGGLS----STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATD 127
++ + + G TA+V ++V D+ D+ P F E VPE + V V A D
Sbjct: 786 YRFVVTAKDGAPEPRLGTASVTVKVRDVADEVPRFMESTVEIKVPENVPDMTVTTVRAFD 845
Query: 128 ADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D + Y++ P D+ F VDA TG I+T + LDYEK +++
Sbjct: 846 PDTKPE--ITYTLRRGPGDL-FKVDARTGQIKTIRGLDYEKDKMH 887
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 24/167 (14%)
Query: 22 MARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------- 70
MA D L + QV ATD D+ + + Y + + + AS F +DPAT
Sbjct: 524 MAGDGRRL---VTQVHATDNDAAENAAITYSIFHVSNNGASKFGIDPATGEIETRTRLNA 580
Query: 71 --EHQGPIQ--DEGGLSSTATVNIRVT-DINDKNPEFQSLPYEFSVPEGQDGLAVGRVHA 125
++ +Q D GGLSS A V + +T N K P F YE V EG + + V
Sbjct: 581 GEQYSITVQASDVGGLSSQAIVEVTITPGPNTKPPRFARPVYEVQVSEGAEINST--VIV 638
Query: 126 TDADEGQNAVVYYSVP--EDI-PFVVDANTGDIRTNKALDYEKQQLY 169
A++ +N V Y++ D+ F + ++G I + LD E Y
Sbjct: 639 LKAEDPENDPVSYAITTGNDLRQFSIGKDSGVISVIRKLDREDLTRY 685
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 45/104 (43%), Gaps = 24/104 (23%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQDGLAVG-----RVHATDADEGQNAVVYYSVPEDI 144
+RV+D+ND P F + PYE +VPE VG + ATD D G N +V Y + E
Sbjct: 139 VRVSDVNDNPPMFINTPYETTVPEVGVSTPVGTTIFRSIQATDKDAGVNGLVEYFIVEGS 198
Query: 145 PFVVD-------------------ANTGDIRTNKALDYEKQQLY 169
+ D + G + K LDYE+ Q Y
Sbjct: 199 QNISDISPNTLTAADGFGVFAIAYPHQGQVTVVKTLDYERTQRY 242
>gi|170037432|ref|XP_001846562.1| protocadherin-15 [Culex quinquefasciatus]
gi|167880555|gb|EDS43938.1| protocadherin-15 [Culex quinquefasciatus]
Length = 1631
Score = 125 bits (314), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 75/95 (78%), Gaps = 2/95 (2%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEF--QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
+D GGL+S+ATVNI+VTDINDKNPEF +LPY FSV EG+D + +G V ATDADEG NA
Sbjct: 588 EDNGGLASSATVNIKVTDINDKNPEFDENNLPYVFSVDEGKDNVVIGTVRATDADEGMNA 647
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ Y++P DIPF +++ TG+IRT LDYEKQ+ Y
Sbjct: 648 EITYTIPSDIPFKINSRTGEIRTKSQLDYEKQKEY 682
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRL-------LDNNTD---AASYFNLDPATEHQG 74
D+ + V + V+ATD D G + Y + +++ T S + + E++
Sbjct: 625 DEGKDNVVIGTVRATDADEGMNAEITYTIPSDIPFKINSRTGEIRTKSQLDYEKQKEYKF 684
Query: 75 PIQDEGGLS----STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADE 130
+ + G TA+V ++V D+ D+ P F E +PE +AV V A D D
Sbjct: 685 VVTAQDGAPEPRLGTASVTVKVRDVPDEVPRFMESVIEVKIPENVPDMAVTTVRAFDPDT 744
Query: 131 GQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ YS+ P D+ F +DA TG I+T + LDYEK +++
Sbjct: 745 KPE--ITYSLKRGPGDL-FKIDAKTGLIKTIRGLDYEKDKIH 783
Score = 42.4 bits (98), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 16/100 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGPIQ-- 77
+ +V ATD D+G+ +V Y + + + AS F +DP T ++ +Q
Sbjct: 428 VTKVSATDNDAGENAVVTYSIFHVSNNGASKFTVDPKTGEIETRSRLNAGEQYSITVQAA 487
Query: 78 DEGGLSSTATVNIRVT-DINDKNPEFQSLPYEFSVPEGQD 116
D GGL+S A V + VT N K P F Y+ V EG +
Sbjct: 488 DIGGLTSQAIVEVSVTPGPNTKPPRFVKPVYDVQVSEGAE 527
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 83 SSTATVNIRVTDINDKNPEFQSL-PYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
S+ ++ + + D+ND P+ + P + +G+ V +V ATD D G+NAVV YS+
Sbjct: 392 SAPMSMTVHLNDVNDNAPKLAMVAPVTLTAGDGRR--LVTKVSATDNDAGENAVVTYSIF 449
Query: 142 E-----DIPFVVDANTGDIRTNKALDYEKQ 166
F VD TG+I T L+ +Q
Sbjct: 450 HVSNNGASKFTVDPKTGEIETRSRLNAGEQ 479
>gi|157118805|ref|XP_001653269.1| cadherin [Aedes aegypti]
gi|108875581|gb|EAT39806.1| AAEL008421-PA [Aedes aegypti]
Length = 1736
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 74/95 (77%), Gaps = 2/95 (2%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQS--LPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
+D GGL+S+ATVNI+VTDINDKNPEF LPY F+V EG+D +G VHATDADEG NA
Sbjct: 682 EDSGGLASSATVNIKVTDINDKNPEFDENVLPYIFTVDEGRDNALIGTVHATDADEGMNA 741
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ Y++P DIPF +++ TG+IRT LDYEKQ+ Y
Sbjct: 742 EITYTIPSDIPFKINSRTGEIRTKSQLDYEKQKEY 776
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---P 141
TA+V ++V DI D+ P F E +PE +AV V A D D + Y++ P
Sbjct: 793 TASVTVKVRDIPDEVPRFMESMLEVKIPENVPDMAVTTVRAFDPDTKPE--ITYTLKRGP 850
Query: 142 EDIPFVVDANTGDIRTNKALDYEKQQLY 169
D+ F +DA TG I+T + LDYEK +++
Sbjct: 851 GDL-FKIDARTGLIKTIRGLDYEKDKIH 877
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE 142
S+ ++ + + D+ND P+ +P S+ G V +V ATD D G+NAV+ YS+
Sbjct: 486 SAPMSLTVHLNDVNDNAPKMTMVP-PVSLTAGDGRRLVTKVTATDNDSGENAVITYSIFH 544
Query: 143 -----DIPFVVDANTGDIRTNKALDYEKQ 166
F +D +G+I T L+ +Q
Sbjct: 545 VSNNGGNKFAIDPKSGEIETRARLNAGEQ 573
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 48/102 (47%), Gaps = 22/102 (21%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR-VHATDADEGQNAVVYYSVPE----- 142
+RV+D+ND P F + PYE +VPE G + + V A D D G N +V Y V E
Sbjct: 131 VRVSDVNDNPPMFINTPYETAVPESTPVGTTIFKNVLAQDKDAGVNGLVEYFVIEGSRQN 190
Query: 143 --DI-PFVVDA------------NTGDIRTNKALDYEKQQLY 169
DI P + A + G + K LDYE+ Q Y
Sbjct: 191 ISDISPNTLTAADGYGVFAIAYPHQGQVTVVKTLDYERIQRY 232
Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 68/156 (43%), Gaps = 21/156 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGPIQ-- 77
+ +V ATD DSG+ ++ Y + + + + F +DP + ++ +Q
Sbjct: 522 VTKVTATDNDSGENAVITYSIFHVSNNGGNKFAIDPKSGEIETRARLNAGEQYSITVQAS 581
Query: 78 DEGGLSSTATVNIRVT-DINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVV 136
D GGLSS A V + VT N K P F Y+ V EG + V A++ +N V
Sbjct: 582 DIGGLSSQAIVEVSVTPGPNTKPPRFIKPVYDVQVSEGAE--INSTVIVVKAEDPENDPV 639
Query: 137 YYSVP--EDI-PFVVDANTGDIRTNKALDYEKQQLY 169
Y V D+ F + +G I + LD E Y
Sbjct: 640 KYFVTTGNDLRQFSIGKESGVISVIRKLDREDLTRY 675
>gi|91091750|ref|XP_968422.1| PREDICTED: similar to cadherin [Tribolium castaneum]
Length = 1516
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 72/93 (77%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVV 136
+D G LSSTATVNI+VTDINDKNPEF PY FSV EG + +VG V ATDADEG NA+V
Sbjct: 651 EDAGKLSSTATVNIKVTDINDKNPEFVGDPYNFSVKEGLNSTSVGFVKATDADEGINALV 710
Query: 137 YYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
YS+P +PF +D TG+IRTN+ALDYE Q+ Y
Sbjct: 711 TYSIPSGLPFDIDNETGEIRTNRALDYETQKNY 743
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 72/150 (48%), Gaps = 16/150 (10%)
Query: 36 VKATDKDSGKFGLVEYRL-------LDNNT-DAASYFNLDPATE--HQGPIQDEGGLS-- 83
VKATD D G LV Y + +DN T + + LD T+ +Q + + G
Sbjct: 697 VKATDADEGINALVTYSIPSGLPFDIDNETGEIRTNRALDYETQKNYQFVVTAKDGAPDP 756
Query: 84 --STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAV-VYYSV 140
+TATV+I V DI D+ P F Y SVPE + V A D D + V +
Sbjct: 757 RLATATVSISVIDIEDELPIFTKSLYTASVPENIPDYFITDVKAEDPDTIKKITYVIHQG 816
Query: 141 PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
P D+ F +D N+G + T + LDYEK ++
Sbjct: 817 PTDL-FRIDENSGAVYTIRGLDYEKDSQHV 845
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 20/105 (19%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR-VHATDADEGQNAVVYYSV-- 140
T V +R++DIND PEF + PYE S+ E G + + + A D D G N +V YS+
Sbjct: 98 TVPVIVRLSDINDNAPEFVNTPYETSISELTPVGTTIFQDILAKDKDAGVNGLVEYSIVK 157
Query: 141 PEDIP---------------FVVD-ANTGDIRTNKALDYEKQQLY 169
E++ F ++ + G + N+ LD+EK Q Y
Sbjct: 158 GENLAHEDDDRIHSEDGFGYFAINLPHQGQVTVNRTLDFEKTQRY 202
Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT 70
Y A D L T+ Q+KA DKDSGK+G +E+ L D YF +D +T
Sbjct: 1113 YHAAITDNSPLSTTVTQIKADDKDSGKYGKLEFSL-----DKTEYFTIDSST 1159
Score = 42.4 bits (98), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 77 QDEGGLSSTA--TVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
+++GG +++A +V + + D+ND P + VP G V + ATD DEG NA
Sbjct: 447 REKGGTAASAPMSVTVHLNDVNDNAPMLPIIA-PVGVPAGDVKRQVATIKATDNDEGDNA 505
Query: 135 VVYYSVPE-----DIPFVVDANTGDIRTNKALDYEKQ 166
+V YS+ + F +D NTG + T L+ Q
Sbjct: 506 LVTYSIYHVSNNGNNKFRIDPNTGVLETVGKLNAGDQ 542
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 67/154 (43%), Gaps = 23/154 (14%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQ------------DEG 80
+KATD D G LV Y + + + + F +DP T E G + D+G
Sbjct: 494 IKATDNDEGDNALVTYSIYHVSNNGNNKFRIDPNTGVLETVGKLNAGDQYSLTVQATDKG 553
Query: 81 GLSSTATVNIRVT-DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY 138
GL S A V + ++ N ++P F+ YE V EG V + A D +N V Y
Sbjct: 554 GLYSQAIVEVTISPGPNTQSPIFEQSVYEIEVSEGATINSTVATITAMDP---ENDPVTY 610
Query: 139 SVPE--DI-PFVVDANTGDIRTNKALDYEKQQLY 169
S+ D+ F + A +G I + LD E Y
Sbjct: 611 SIVSGNDLRQFSIGAKSGVITVIRKLDREDLTRY 644
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 78/194 (40%), Gaps = 63/194 (32%)
Query: 29 LGVTLMQ-VKATDKDSGKFGLVEYRLLD------------NNTDAASYFNLDPATEHQGP 75
+G T+ Q + A DKD+G GLVEY ++ ++ D YF ++ HQG
Sbjct: 130 VGTTIFQDILAKDKDAGVNGLVEYSIVKGENLAHEDDDRIHSEDGFGYFAIN--LPHQGQ 187
Query: 76 IQ-------------------------DEGGLSSTATVNIRVTDINDKNPEF-------- 102
+ D LSST T+ + + D +D+NP F
Sbjct: 188 VTVNRTLDFEKTQRYYVTVVATDRAHDDTQRLSSTTTLVVNIKDDDDQNPSFIYKGCMLL 247
Query: 103 --QSLPYEFS------VPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP------FVV 148
+ E+S V G ++ ++ A D D N+ ++YS P F +
Sbjct: 248 DGTCINPEYSASVSSGVLHGILNISPEKIQAVDMDT-INSPIHYSFVSGTPESYSEYFQI 306
Query: 149 DANTGDIRTNKALD 162
D+ TG +R KA+D
Sbjct: 307 DSETGAVRQIKAVD 320
>gi|270001289|gb|EEZ97736.1| protocadherin 15 [Tribolium castaneum]
Length = 1539
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/93 (65%), Positives = 72/93 (77%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVV 136
+D G LSSTATVNI+VTDINDKNPEF PY FSV EG + +VG V ATDADEG NA+V
Sbjct: 674 EDAGKLSSTATVNIKVTDINDKNPEFVGDPYNFSVKEGLNSTSVGFVKATDADEGINALV 733
Query: 137 YYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
YS+P +PF +D TG+IRTN+ALDYE Q+ Y
Sbjct: 734 TYSIPSGLPFDIDNETGEIRTNRALDYETQKNY 766
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 72/150 (48%), Gaps = 16/150 (10%)
Query: 36 VKATDKDSGKFGLVEYRL-------LDNNT-DAASYFNLDPATE--HQGPIQDEGGLS-- 83
VKATD D G LV Y + +DN T + + LD T+ +Q + + G
Sbjct: 720 VKATDADEGINALVTYSIPSGLPFDIDNETGEIRTNRALDYETQKNYQFVVTAKDGAPDP 779
Query: 84 --STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAV-VYYSV 140
+TATV+I V DI D+ P F Y SVPE + V A D D + V +
Sbjct: 780 RLATATVSISVIDIEDELPIFTKSLYTASVPENIPDYFITDVKAEDPDTIKKITYVIHQG 839
Query: 141 PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
P D+ F +D N+G + T + LDYEK ++
Sbjct: 840 PTDL-FRIDENSGAVYTIRGLDYEKDSQHV 868
Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 20/105 (19%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR-VHATDADEGQNAVVYYSVP- 141
T V +R++DIND PEF + PYE S+ E G + + + A D D G N +V YS+
Sbjct: 121 TVPVIVRLSDINDNAPEFVNTPYETSISELTPVGTTIFQDILAKDKDAGVNGLVEYSIVK 180
Query: 142 -EDIP---------------FVVD-ANTGDIRTNKALDYEKQQLY 169
E++ F ++ + G + N+ LD+EK Q Y
Sbjct: 181 GENLAHEDDDRIHSEDGFGYFAINLPHQGQVTVNRTLDFEKTQRY 225
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT 70
Y A D L T+ Q+KA DKDSGK+G +E+ L D YF +D +T
Sbjct: 1136 YHAAITDNSPLSTTVTQIKADDKDSGKYGKLEFSL-----DKTEYFTIDSST 1182
Score = 42.4 bits (98), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 77 QDEGGLSSTA--TVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
+++GG +++A +V + + D+ND P + VP G V + ATD DEG NA
Sbjct: 470 REKGGTAASAPMSVTVHLNDVNDNAPMLPIIA-PVGVPAGDVKRQVATIKATDNDEGDNA 528
Query: 135 VVYYSVPE-----DIPFVVDANTGDIRTNKALDYEKQ 166
+V YS+ + F +D NTG + T L+ Q
Sbjct: 529 LVTYSIYHVSNNGNNKFRIDPNTGVLETVGKLNAGDQ 565
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 67/154 (43%), Gaps = 23/154 (14%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQ------------DEG 80
+KATD D G LV Y + + + + F +DP T E G + D+G
Sbjct: 517 IKATDNDEGDNALVTYSIYHVSNNGNNKFRIDPNTGVLETVGKLNAGDQYSLTVQATDKG 576
Query: 81 GLSSTATVNIRVT-DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY 138
GL S A V + ++ N ++P F+ YE V EG V + A D +N V Y
Sbjct: 577 GLYSQAIVEVTISPGPNTQSPIFEQSVYEIEVSEGATINSTVATITAMDP---ENDPVTY 633
Query: 139 SVPE--DI-PFVVDANTGDIRTNKALDYEKQQLY 169
S+ D+ F + A +G I + LD E Y
Sbjct: 634 SIVSGNDLRQFSIGAKSGVITVIRKLDREDLTRY 667
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 78/194 (40%), Gaps = 63/194 (32%)
Query: 29 LGVTLMQ-VKATDKDSGKFGLVEYRLLD------------NNTDAASYFNLDPATEHQGP 75
+G T+ Q + A DKD+G GLVEY ++ ++ D YF ++ HQG
Sbjct: 153 VGTTIFQDILAKDKDAGVNGLVEYSIVKGENLAHEDDDRIHSEDGFGYFAIN--LPHQGQ 210
Query: 76 IQ-------------------------DEGGLSSTATVNIRVTDINDKNPEF-------- 102
+ D LSST T+ + + D +D+NP F
Sbjct: 211 VTVNRTLDFEKTQRYYVTVVATDRAHDDTQRLSSTTTLVVNIKDDDDQNPSFIYKGCMLL 270
Query: 103 --QSLPYEFS------VPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP------FVV 148
+ E+S V G ++ ++ A D D N+ ++YS P F +
Sbjct: 271 DGTCINPEYSASVSSGVLHGILNISPEKIQAVDMDT-INSPIHYSFVSGTPESYSEYFQI 329
Query: 149 DANTGDIRTNKALD 162
D+ TG +R KA+D
Sbjct: 330 DSETGAVRQIKAVD 343
>gi|195444020|ref|XP_002069681.1| GK11655 [Drosophila willistoni]
gi|194165766|gb|EDW80667.1| GK11655 [Drosophila willistoni]
Length = 1731
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 62/95 (65%), Positives = 72/95 (75%), Gaps = 2/95 (2%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEF--QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
+D GGLSS+ATVNI+VTDINDKNPEF +LPY F V EGQ VG VHATDADEG NA
Sbjct: 678 EDNGGLSSSATVNIKVTDINDKNPEFDESTLPYVFQVDEGQLDTFVGVVHATDADEGINA 737
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ YS+P DIPF ++ +G+IRT K LDYEKQ Y
Sbjct: 738 EITYSIPTDIPFAINGKSGEIRTAKKLDYEKQNEY 772
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 45/99 (45%), Gaps = 19/99 (19%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR-VHATDADEGQNAVVYYSVPEDI--- 144
+RV+DIND P F + PYE +VPE G + R + A D D G N +V Y + E
Sbjct: 130 VRVSDINDNAPRFMNTPYEVTVPESTPVGTTIFRNIQALDKDAGVNGLVEYFIAEGSTNA 189
Query: 145 -------------PFVVD-ANTGDIRTNKALDYEKQQLY 169
F + + G + K LDYEK Q Y
Sbjct: 190 TEDEKLTSADGYGTFAISFPHQGQVTVAKTLDYEKIQRY 228
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 67/157 (42%), Gaps = 23/157 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI------------Q 77
+ QV ATD D G +V Y + + + A F ++ T E G +
Sbjct: 518 VTQVNATDNDEGANAVVTYSIYHVSNNGAQKFIINEQTGEIETHGRLLAGEQYSITVQAT 577
Query: 78 DEGGLSSTATVNIRVT-DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAV 135
D GGLSS A V + VT N K P F+ YE V EG + V VH AD+ +N
Sbjct: 578 DIGGLSSQAIVEVSVTPGPNTKPPRFEKAIYEVQVSEGAEINSTVTVVH---ADDPENDP 634
Query: 136 VYYSV--PEDI-PFVVDANTGDIRTNKALDYEKQQLY 169
V YS+ D+ F V G I + LD E Y
Sbjct: 635 VVYSIISGNDLRQFAVGQENGVIIVIRKLDRESLTRY 671
Score = 42.4 bits (98), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI 144
TA+V + V D+ D+ P F + +PE + V V A D D ++
Sbjct: 789 TASVTVMVRDLPDEVPRFSDARIDVHIPENEANYLVATVQAFDPDSMPEITYVLRKGDEE 848
Query: 145 PFVVDANTGDIR-TNKALDYEKQQLY 169
F V N+G++R T+K LD+EKQ+ +
Sbjct: 849 LFKVFPNSGEVRTTSKGLDFEKQRQH 874
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE 142
S+ ++ + + D+ND NP ++ S+ G V +V+ATD DEG NAVV YS+
Sbjct: 482 SAPLSLTVHLRDVND-NPPKLAMVAPISITAGDQQRLVTQVNATDNDEGANAVVTYSIYH 540
Query: 143 -----DIPFVVDANTGDIRTNKAL 161
F+++ TG+I T+ L
Sbjct: 541 VSNNGAQKFIINEQTGEIETHGRL 564
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD 59
FY A+ + ++ +++QV+ATD+DSGKFG + Y++ D+ D
Sbjct: 1164 FY-AVVTTEMDIDTSILQVRATDRDSGKFGQIRYKIYDDEED 1204
>gi|383865554|ref|XP_003708238.1| PREDICTED: cadherin-87A-like, partial [Megachile rotundata]
Length = 1434
Score = 123 bits (308), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 69/93 (74%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVV 136
+D GGLSSTATVNI+VTDINDKNPEF LPYEF+V EG+ +GRVHA DADEG NA +
Sbjct: 633 EDSGGLSSTATVNIKVTDINDKNPEFVDLPYEFTVKEGEARKLIGRVHAEDADEGINAEI 692
Query: 137 YYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y P+DIPF VD TGD+ T LDYE+ Y
Sbjct: 693 TYFAPDDIPFTVDPETGDVLTKIVLDYEQNDEY 725
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 50/111 (45%), Gaps = 25/111 (22%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPE--GQDGLAVGRVHATDADEGQNAVVYYSV-P 141
T V +RV+DIND P+F + PYE +VPE V A DAD G N +V YS+ P
Sbjct: 75 TIPVIVRVSDINDNKPKFINTPYETTVPELTPVGSTIFKNVVAVDADAGVNGIVEYSIAP 134
Query: 142 EDIPFVVD----------------------ANTGDIRTNKALDYEKQQLYL 170
D + + + G + N+ LD+EK Q YL
Sbjct: 135 GDGSRIGNNEGVGRNRITTADGYGYFSINLPHQGQVTVNRTLDFEKTQRYL 185
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPED 143
+TATV ++V D+ D+ P F YE V E V +V A D D + +
Sbjct: 741 ATATVTVKVIDVEDEVPVFHQSSYEARVKENVPDYTVLQVTADDPDTKKQITYMIKQGDT 800
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLYL 170
F +D TG I+T + LDYE++ ++
Sbjct: 801 ELFSIDPKTGVIKTIRGLDYERENQHI 827
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 21/105 (20%)
Query: 7 PSALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL 66
P + + S ++ A+ R + T++QVKA DKD+GK+G +EY++L + YF +
Sbjct: 1085 PESNQKLSRGRYFAAIPR-TAQFTSTVIQVKAHDKDNGKYGKLEYKILGGR--GSDYFAM 1141
Query: 67 DPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
D ++ G + +TAT + N + LP++F V
Sbjct: 1142 DSSS---------GIIRTTATFD---------NVDPAELPFKFDV 1168
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 77 QDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
+++ G++++A ++ VT D+ND P + +V G+ V +V ATD DEG+NA
Sbjct: 429 REKTGVAASAPLSFVVTLNDVNDNAPMLPMI-TPITVQAGETKRVVTKVEATDNDEGENA 487
Query: 135 VVYYSVPEDI-----PFVVDANTGDIRTNKALDYEKQ 166
+ YS+ F +D TG I + + L+ +Q
Sbjct: 488 EITYSIYHVSNNGLHKFKIDPKTGVIESVRKLNAGEQ 524
>gi|242023771|ref|XP_002432304.1| protocadherin-15 precursor, putative [Pediculus humanus corporis]
gi|212517727|gb|EEB19566.1| protocadherin-15 precursor, putative [Pediculus humanus corporis]
Length = 1512
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/88 (68%), Positives = 69/88 (78%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVV 136
+D GGLSSTATVNI+VTDINDKNPEF LPYEF V EG+ VG VHA D DEG NA+V
Sbjct: 663 EDTGGLSSTATVNIKVTDINDKNPEFVDLPYEFKVNEGEINQTVGTVHAVDLDEGINALV 722
Query: 137 YYSVPEDIPFVVDANTGDIRTNKALDYE 164
YS+P DIPFV++ TG I+T+ ALDYE
Sbjct: 723 SYSLPSDIPFVINETTGVIKTSAALDYE 750
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 16/160 (10%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRL------LDNNT----DAASYFNLDPATEHQG 74
++ E+ T+ V A D D G LV Y L + N T ++ + + EH+
Sbjct: 698 NEGEINQTVGTVHAVDLDEGINALVSYSLPSDIPFVINETTGVIKTSAALDYETLKEHKF 757
Query: 75 PIQDEGGLS----STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADE 130
+ G STATV ++V D+ D+ P F L Y+ VPE G + +V A D D
Sbjct: 758 VVTAMDGAPDPRLSTATVTVKVMDVEDEVPVFNILEYKSVVPENVPGYMIIKVKADDMDT 817
Query: 131 GQNAV-VYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ V P D+ F+VD+ TG+++ + LDYE++ Y
Sbjct: 818 IKKITYVIKQGPTDL-FMVDSVTGELKCTRGLDYERESNY 856
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 51/111 (45%), Gaps = 25/111 (22%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAV-GRVHATDADEGQNAVVYYS-VP 141
T V +RV+DIND P F + PYE +V E G + + A D+D G N +V YS VP
Sbjct: 103 TIPVIVRVSDINDNAPHFINTPYETTVSELTPVGTTIYQNILAKDSDAGVNGLVEYSIVP 162
Query: 142 EDIPFVVDAN----------------------TGDIRTNKALDYEKQQLYL 170
D ++ N G + N++LDYEK Q YL
Sbjct: 163 GDGKNLITTNGVGRNRITVGDGYGYFSINLPHQGQVTVNRSLDYEKTQRYL 213
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 22/98 (22%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVP------------EGQDGLAVGRVHATDADEG 131
S T+ I VTD+ND PEF P ++ P + Q G V V ATD+D G
Sbjct: 1095 SLTTLKIHVTDVNDNKPEFVFPPLKYKNPPNSNVYYAAIPKDSQFGTNVLTVKATDSDSG 1154
Query: 132 QNAVVYYSVPEDIP-------FVVDANTGDIRTNKALD 162
+ + V Y + +P F +D TG +RT K D
Sbjct: 1155 RYSYVSYEI---LPNGKSSDYFAIDNVTGVVRTKKLFD 1189
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV 140
S+ T+ + + D+ND P Q +P +V G+ V RV ATD D G+NAV+ YS+
Sbjct: 467 SAPITLTVSLKDVNDNAPTLQMIP-PITVEAGEGKREVVRVEATDNDYGENAVITYSI 523
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT 70
+++Y A+ +D + G ++ VKATD DSG++ V Y +L N ++ YF +D T
Sbjct: 1127 NVYYAAIPKDS-QFGTNVLTVKATDSDSGRYSYVSYEILPNG-KSSDYFAIDNVT 1179
>gi|307175878|gb|EFN65693.1| Protocadherin-15 [Camponotus floridanus]
Length = 1377
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 68/93 (73%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVV 136
+D GGL STATVNI VTDINDKNPEF LPYEFSV EG+ +GRVHA DADEG NA +
Sbjct: 474 EDTGGLFSTATVNIMVTDINDKNPEFMDLPYEFSVKEGEARKLIGRVHAEDADEGINAEI 533
Query: 137 YYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y P+DIPF+VD TGD+ T LDYE+ Y
Sbjct: 534 TYFAPDDIPFIVDPETGDVLTKIVLDYEQNNEY 566
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPED 143
+TATV ++V D+ D+ P F+ YE V E V +V A D D + +
Sbjct: 582 ATATVTVKVIDVEDEVPLFRQSSYEARVKENVPDYNVIQVTADDPDTKKQITYMIKQGDT 641
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLYL 170
F +D TG I+T + LDYE Q ++
Sbjct: 642 ELFSIDPKTGVIKTIRGLDYESQNQHV 668
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT 70
++ A+ R + T++QVKA DKD+GKFG +EY++L+ + +F +D +T
Sbjct: 937 YFAAIPR-TAQFSSTVIQVKAHDKDNGKFGKLEYKILEGR--GSDHFAIDSST 986
Score = 36.2 bits (82), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 13/93 (13%)
Query: 84 STATVNIRVTDINDKNPEF------QSLP---YEFSVPE-GQDGLAVGRVHATDADEGQN 133
+T V I+V D+ND PEF Q L Y ++P Q V +V A D D G+
Sbjct: 905 NTTMVKIQVLDVNDNKPEFIFPEVNQKLTRGRYFAAIPRTAQFSSTVIQVKAHDKDNGKF 964
Query: 134 AVVYYSVPE---DIPFVVDANTGDIRTNKALDY 163
+ Y + E F +D++TG IRT D+
Sbjct: 965 GKLEYKILEGRGSDHFAIDSSTGIIRTTVTFDH 997
>gi|380016357|ref|XP_003692153.1| PREDICTED: protocadherin-15-like [Apis florea]
Length = 1841
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 68/93 (73%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVV 136
+D GGL STATVNI+VTDINDKNPEF LPYEFSV EG+ +GRVHA DADEG NA +
Sbjct: 625 EDSGGLFSTATVNIKVTDINDKNPEFVGLPYEFSVKEGEARKLIGRVHAEDADEGINAEI 684
Query: 137 YYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y P+DIPF VD TGD+ T LDYE+ Y
Sbjct: 685 TYFAPDDIPFTVDPETGDVLTKIVLDYEQNDEY 717
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPED 143
+TATV ++V D+ D+ P F YE V E V +V A D D + +
Sbjct: 733 ATATVTVKVIDVEDEVPVFHQSSYEARVKENIPDYTVLQVTADDPDTKKQITYMIKQGDT 792
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLYL 170
F +D+ TG I+T + LDYE++ ++
Sbjct: 793 ELFAIDSRTGVIKTTRGLDYERESQHI 819
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 25/115 (21%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQ--DGLAVGRVHATDADEGQNAVVYYSV-P 141
T V +RV+DIND P+F + PYE +VPE V A DAD G N +V YS+ P
Sbjct: 123 TIPVIVRVSDINDNAPKFINTPYETTVPELTPVGSTIFKNVVAVDADAGVNGIVEYSIAP 182
Query: 142 EDIP---------------------FVVD-ANTGDIRTNKALDYEKQQLYLERVF 174
D F ++ + G + N+ LD+E+ Q YL +
Sbjct: 183 GDGTGIGNNDGVGRNRITTADGYGYFSINLPHQGQVTVNRTLDFERTQRYLVTIL 237
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 21/98 (21%)
Query: 14 SDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQ 73
S ++ A+ R + G T++QVKA DKD+GK+G +EYR+L + YF +D ++
Sbjct: 1094 SRGRYFAAIPRSA-QFGSTVIQVKAHDKDNGKYGKLEYRILGGR--GSDYFAMDTSS--- 1147
Query: 74 GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
G + +TAT + N + LP++F V
Sbjct: 1148 ------GIIRTTATFD---------NVDPAELPFKFDV 1170
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 77 QDEGGLSSTATVNIRV--TDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
+++ G++++A ++ V D+ND P +P +V G+ V +V ATD DEG+NA
Sbjct: 421 REKTGVAASAPLSFVVILNDVNDNAPMLPMIP-PITVQAGETKKVVTKVEATDNDEGENA 479
Query: 135 VVYYSV 140
+ YS+
Sbjct: 480 EITYSI 485
>gi|328783691|ref|XP_396248.4| PREDICTED: protocadherin-15 [Apis mellifera]
Length = 1974
Score = 122 bits (306), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 68/93 (73%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVV 136
+D GGL STATVNI+VTDINDKNPEF LPYEFSV EG+ +GRVHA DADEG NA +
Sbjct: 680 EDSGGLFSTATVNIKVTDINDKNPEFVGLPYEFSVKEGEARKLIGRVHAEDADEGINAEI 739
Query: 137 YYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y P+DIPF VD TGD+ T LDYE+ Y
Sbjct: 740 TYFAPDDIPFTVDPETGDVLTKIVLDYEQNDEY 772
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPED 143
+TATV ++V D+ D+ P F YE V E V +V A D D + +
Sbjct: 788 ATATVTVKVIDVEDEVPVFHQSSYEARVKENIPDYTVLQVTADDPDTKKQITYMIKQGDT 847
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLYL 170
F +D TG I+T + LDYE++ ++
Sbjct: 848 ELFAIDQRTGVIKTTRGLDYERESQHI 874
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 25/115 (21%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQ--DGLAVGRVHATDADEGQNAVVYYSV-P 141
T V +RV+DIND P+F + PYE +VPE V A DAD G N +V YS+ P
Sbjct: 122 TIPVIVRVSDINDNAPKFINTPYETTVPELTPVGSTIFKNVVAVDADAGVNGIVEYSIAP 181
Query: 142 EDIP---------------------FVVD-ANTGDIRTNKALDYEKQQLYLERVF 174
D F ++ + G + N+ LD+E+ Q YL +
Sbjct: 182 GDGTGIGNNDGVGRNRITTADGYGYFSINLPHQGQVTVNRTLDFERTQRYLVTIL 236
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 21/98 (21%)
Query: 14 SDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQ 73
S ++ A+ R + G T++QVKA DKD+GK+G +EYR+L + YF +D ++
Sbjct: 1157 SRGRYFAAIPRSA-QFGSTVIQVKAHDKDNGKYGKLEYRILGGR--GSDYFAMDTSS--- 1210
Query: 74 GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
G + +TAT + N + LP++F V
Sbjct: 1211 ------GIIRTTATFD---------NVDPAELPFKFDV 1233
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 77 QDEGGLSSTATVNIRV--TDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
+++ G++++A ++ V D+ND P +P +V G+ V +V ATD DEG+NA
Sbjct: 476 REKTGVAASAPLSFVVILNDVNDNAPMLPMIP-PITVQAGETKKVVTKVEATDNDEGENA 534
Query: 135 VVYYSVPEDI-----PFVVDANTGDIRTNKALDYEKQ 166
+ YS+ F +D TG I + + L+ +Q
Sbjct: 535 EITYSIYHVSNNGLHKFKIDPRTGVIESVRKLNAGEQ 571
>gi|307191989|gb|EFN75379.1| Protocadherin-15 [Harpegnathos saltator]
Length = 1694
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 67/93 (72%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVV 136
+D GGL STATVNI VTDINDKNPEF LPYEFSV EG+ +GRVHA DADEG NA +
Sbjct: 450 EDTGGLYSTATVNIMVTDINDKNPEFVGLPYEFSVKEGEARKLIGRVHAEDADEGINAEI 509
Query: 137 YYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y P+DIPF VD TGD+ T LDYE+ Y
Sbjct: 510 TYFAPDDIPFTVDPETGDVLTKIVLDYEQNDEY 542
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPED 143
+TATV ++V D+ D+ P F YE V E V +V A D D + +
Sbjct: 558 ATATVTVKVIDVEDEVPVFHQSSYEARVKENVPDYNVIQVTADDPDTKKQITYMIRQGDT 617
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLYL 170
F +D TG I+T + LDYEK ++
Sbjct: 618 ELFSIDPKTGVIKTVRGLDYEKDNQHV 644
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 7 PSALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL 66
P A + + ++ A+ R + T++QVKA DKD+GK+G +EYR+L+ + YF +
Sbjct: 919 PEASQGLTRGRYFAAIPR-TAQFSSTVVQVKAHDKDNGKYGKLEYRILEGR--GSGYFAI 975
Query: 67 DPAT 70
D +T
Sbjct: 976 DSST 979
Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 77 QDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
+++ G+++++ ++ VT D+ND P+ +P +V G+ V +V ATD DEG+NA
Sbjct: 246 REKTGVAASSPLSFVVTLNDVNDNAPQLPMMP-PITVQAGETKRQVTKVEATDNDEGENA 304
Query: 135 VVYYSVPEDI-----PFVVDANTGDIRTNKALDYEKQ 166
+ YS+ F +D TG I T + L+ +Q
Sbjct: 305 EITYSIYHVSNNGLQKFKIDPKTGVIETMRKLNAGEQ 341
Score = 38.9 bits (89), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 41/100 (41%), Gaps = 27/100 (27%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR-----------------VHAT 126
+T V I+V D+ND P EF PE GL GR V A
Sbjct: 898 NTTMVKIQVLDVNDNKP-------EFIFPEASQGLTRGRYFAAIPRTAQFSSTVVQVKAH 950
Query: 127 DADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDY 163
D D G+ + Y + E F +D++TG IRT D+
Sbjct: 951 DKDNGKYGKLEYRILEGRGSGYFAIDSSTGIIRTTATFDH 990
>gi|195054108|ref|XP_001993968.1| GH18138 [Drosophila grimshawi]
gi|193895838|gb|EDV94704.1| GH18138 [Drosophila grimshawi]
Length = 1728
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/95 (63%), Positives = 71/95 (74%), Gaps = 2/95 (2%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSL--PYEFSVPEGQDGLAVGRVHATDADEGQNA 134
+D GGLSSTATVNI+VTDINDKNPEF L PY F V EG+D VG VHATDADEG NA
Sbjct: 687 EDNGGLSSTATVNIKVTDINDKNPEFDELNQPYVFHVDEGKDDAFVGIVHATDADEGVNA 746
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ YS+P DIPF ++ +G+IRT+ LDYE+ Y
Sbjct: 747 EITYSIPTDIPFAINGKSGEIRTSNELDYERVNEY 781
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 46/106 (43%), Gaps = 33/106 (31%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR-VHATDADEGQNAVVYYSVPEDIPFV 147
+RV+D+ND P+F + PYE +VPE G V R + A D D G N +V Y F+
Sbjct: 137 VRVSDVNDNAPQFMNTPYEVTVPESTPLGTTVFRNIQAVDKDAGVNGLVEY-------FI 189
Query: 148 VDANT------------------------GDIRTNKALDYEKQQLY 169
V NT G + K LDYEK Q Y
Sbjct: 190 VKGNTNTTEDEKLTSADGYGSFAISFPHQGQVTVAKTLDYEKIQRY 235
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI 144
TA+V + V D+ D+ P+F +PE Q V V A D D ++
Sbjct: 798 TASVTVIVHDLPDEVPKFNDARINVRIPENQADFLVATVQAHDPDTMPEITYVLRKGDEE 857
Query: 145 PFVVDANTGDIRTNKALDYEKQQLY 169
F V + TG+IRT K LDYEK++ +
Sbjct: 858 LFKVASKTGEIRTTKGLDYEKERQH 882
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 79/176 (44%), Gaps = 28/176 (15%)
Query: 23 ARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI--- 76
A D+HE + + Q+ ATD D G +V Y + + + F ++ T E QG +
Sbjct: 518 AGDQHEQRL-VTQMMATDIDEGPNAVVTYSIYHVSNNGMQKFKINEQTGEIETQGRLLAG 576
Query: 77 ---------QDEGGLSSTATVNIRVT-DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHA 125
D GGLSS A V + VT N K P F ++ YE V EG + V VH
Sbjct: 577 EQYSITVQASDIGGLSSQAIVEVTVTPGPNTKPPRFTNVLYEVQVSEGAEINSTVTVVH- 635
Query: 126 TDADEGQNAVVYYSV--PEDI-PFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
AD+ +N V YS+ D+ F V +G I + LD E L R LI K
Sbjct: 636 --ADDPENDPVIYSIMSGNDLRQFSVGQQSGVIMVIRKLDRES----LTRYQLIVK 685
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 28/37 (75%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD 55
Y A+ + ++ +T++QV+ATD+DSGKFG + Y+L D
Sbjct: 1170 YYAVITPEMDIDMTILQVRATDRDSGKFGSLRYKLYD 1206
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 83 SSTATVNIRVTDINDKNPEFQSL-PYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
S+ ++ + + D+ND P+ + P S + + V ++ ATD DEG NAVV YS+
Sbjct: 489 SAPLSLTVHLRDVNDNAPKLAMVAPISISAGDQHEQRLVTQMMATDIDEGPNAVVTYSIY 548
Query: 142 EDI-----PFVVDANTGDIRTNKAL 161
F ++ TG+I T L
Sbjct: 549 HVSNNGMQKFKINEQTGEIETQGRL 573
>gi|340725229|ref|XP_003400975.1| PREDICTED: protocadherin Fat 3-like [Bombus terrestris]
Length = 1961
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/93 (62%), Positives = 68/93 (73%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVV 136
+D GGL +TATVNI+VTDINDKNPEF LPYEF+V EG+ +GRVHA DADEG NA +
Sbjct: 679 EDSGGLFNTATVNIKVTDINDKNPEFVDLPYEFTVKEGEARKLIGRVHAEDADEGINAEI 738
Query: 137 YYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y P+DIPF VD TGD+ T LDYE+ Y
Sbjct: 739 TYFAPDDIPFTVDPETGDVLTKIVLDYEQNDEY 771
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 25/111 (22%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQ--DGLAVGRVHATDADEGQNAVVYYSV-P 141
T V +RV+DIND P+F + PYE +VPE V A DAD G N +V YS+ P
Sbjct: 121 TIPVIVRVSDINDNAPKFINTPYETTVPELTPVGSTIFKNVVAVDADAGVNGIVEYSIAP 180
Query: 142 EDIP---------------------FVVD-ANTGDIRTNKALDYEKQQLYL 170
D F ++ + G + N+ LD+E+ Q YL
Sbjct: 181 GDGTGIGNNDGVGRNRITTADGYGYFSINLPHQGQVTVNRTLDFERTQRYL 231
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPED 143
+TATV ++V D+ D+ P F YE V E V +V A D D +
Sbjct: 787 ATATVTVKVIDVEDEVPVFHQSSYEARVKENIPDFTVLQVTADDPDTKKQITYMIKQGNT 846
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLYL 170
F +D TG I+T + LDYE++ ++
Sbjct: 847 ELFDIDPKTGAIKTVRGLDYERENQHI 873
Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 21/98 (21%)
Query: 14 SDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQ 73
S ++ A+ R + T++QVKA DKD+GK+G +EY++L + YF +D ++
Sbjct: 1151 SRGRYFAAIPRTA-QFASTVIQVKAHDKDNGKYGKLEYKILGGR--GSDYFAMDSSS--- 1204
Query: 74 GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
G + +TAT + N + LP++F V
Sbjct: 1205 ------GIIRTTATFD---------NVDLSELPFKFDV 1227
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 77 QDEGGLSSTATVNIRV--TDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
+++ G++++A ++ V D+ND P + +V G+ V +V ATD DEG+NA
Sbjct: 475 REKTGVAASAPLSFVVILNDVNDNAPMLPMIA-PITVQAGETKKVVTKVEATDNDEGENA 533
Query: 135 VVYYSVPEDI-----PFVVDANTGDIRTNKALDYEKQ 166
+ YS+ F +D TG I + + L+ +Q
Sbjct: 534 EITYSIYHVSNNGLHKFKIDPKTGLIESVRKLNAGEQ 570
>gi|350403960|ref|XP_003486964.1| PREDICTED: protocadherin Fat 3-like [Bombus impatiens]
Length = 1968
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/93 (62%), Positives = 68/93 (73%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVV 136
+D GGL +TATVNI+VTDINDKNPEF LPYEF+V EG+ +GRVHA DADEG NA +
Sbjct: 679 EDSGGLFNTATVNIKVTDINDKNPEFVDLPYEFTVKEGEARKLIGRVHAEDADEGINAEI 738
Query: 137 YYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y P+DIPF VD TGD+ T LDYE+ Y
Sbjct: 739 TYFAPDDIPFTVDPETGDVLTKIVLDYEQNDEY 771
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 25/115 (21%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQ--DGLAVGRVHATDADEGQNAVVYYSV-P 141
T V +RV+DIND P+F + PYE +VPE V A DAD G N +V YS+ P
Sbjct: 121 TIPVIVRVSDINDNAPKFINTPYETTVPELTPVGSTIFKNVVAVDADAGVNGIVEYSIAP 180
Query: 142 EDIP---------------------FVVD-ANTGDIRTNKALDYEKQQLYLERVF 174
D F ++ + G + N+ LD+E+ Q YL +
Sbjct: 181 GDGTGIGNNDGVGRNRITTADGYGYFSINLPHQGQVTVNRTLDFERTQRYLVTIL 235
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPED 143
+TATV ++V D+ D+ P F YE V E V +V A D D +
Sbjct: 787 ATATVTVKVIDVEDEVPVFHQSSYEARVKENIPDYTVLQVTADDPDTKKQITYMIKQGNT 846
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLYL 170
F +D TG I+T + LDYE++ ++
Sbjct: 847 ELFGIDPKTGVIKTVRGLDYERENQHI 873
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 21/98 (21%)
Query: 14 SDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQ 73
S ++ A+ R + T++QVKA DKD+GK+G +EY++L + YF +D ++
Sbjct: 1166 SRGRYFAAIPRTA-QFASTVIQVKAHDKDNGKYGKLEYKILGGR--GSDYFAMDSSS--- 1219
Query: 74 GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
G + +TAT + N + LP++F V
Sbjct: 1220 ------GIIRTTATFD---------NVDLSELPFKFDV 1242
Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 77 QDEGGLSSTATVNIRV--TDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
+++ G++++A ++ V D+ND P + +V G+ V +V ATD DEG+NA
Sbjct: 475 REKTGVAASAPLSFVVILNDVNDNAPMLPMIA-PITVQAGETKKVVTKVEATDNDEGENA 533
Query: 135 VVYYSVPEDI-----PFVVDANTGDIRTNKALDYEKQ 166
+ YS+ F +D TG I + + L+ +Q
Sbjct: 534 EITYSIYHVSNNGLHKFKIDPKTGLIESVRKLNAGEQ 570
>gi|322786605|gb|EFZ13000.1| hypothetical protein SINV_09566 [Solenopsis invicta]
Length = 1023
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 67/93 (72%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVV 136
+D GGL STATVNI VTDINDKNPEF LPYEF+V EG+ +GRVHA DADEG NA +
Sbjct: 173 EDTGGLYSTATVNIMVTDINDKNPEFVGLPYEFTVKEGEARKLIGRVHAEDADEGINAEI 232
Query: 137 YYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y P+DIPF VD TGD+ T LDYE+ Y
Sbjct: 233 TYFAPDDIPFTVDPETGDVLTKIVLDYEQNDEY 265
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 21/105 (20%)
Query: 7 PSALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL 66
P A + + ++ A+ + T++QVKA DKD+GK+G +EY++L+ +SYF +
Sbjct: 586 PEASQKLTKGRYFAAIPSTA-QFASTVLQVKAHDKDNGKYGKLEYKILEGR--GSSYFAI 642
Query: 67 DPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
D +T G + +TAT + + + LP++F V
Sbjct: 643 DSST---------GIIRTTATFD---------HVDTSELPFKFDV 669
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 13/93 (13%)
Query: 84 STATVNIRVTDINDKNPEF------QSLP---YEFSVPE-GQDGLAVGRVHATDADEGQN 133
+T V I+V D+ND PEF Q L Y ++P Q V +V A D D G+
Sbjct: 565 NTTMVKIQVLDVNDNKPEFIFPEASQKLTKGRYFAAIPSTAQFASTVLQVKAHDKDNGKY 624
Query: 134 AVVYYSVPE---DIPFVVDANTGDIRTNKALDY 163
+ Y + E F +D++TG IRT D+
Sbjct: 625 GKLEYKILEGRGSSYFAIDSSTGIIRTTATFDH 657
>gi|194906021|ref|XP_001981299.1| GG11701 [Drosophila erecta]
gi|190655937|gb|EDV53169.1| GG11701 [Drosophila erecta]
Length = 1705
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 73/95 (76%), Gaps = 2/95 (2%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQ--SLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
+D GGLSS+ATVNI+VTDINDKNPEF+ +LPY F V EG+ +VG VHATDADEG NA
Sbjct: 678 EDTGGLSSSATVNIKVTDINDKNPEFEASTLPYVFQVEEGKAQASVGVVHATDADEGINA 737
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ YS+P DIPF ++A +G+I T K LDYE+ Y
Sbjct: 738 EITYSIPTDIPFTINATSGEILTAKELDYEQLNEY 772
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 47/103 (45%), Gaps = 18/103 (17%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR-VHATDADEGQNAVVYYSVPE 142
T + +RV+DIND P F + PYE +VPE G + R + A D D G N +V Y + E
Sbjct: 124 TIPIIVRVSDINDNAPRFMNTPYEVTVPESTPVGTTIFRNIQALDKDAGVNGLVEYFIAE 183
Query: 143 DIPFVVDA----------------NTGDIRTNKALDYEKQQLY 169
DA + G + K LD+EK Q Y
Sbjct: 184 GSANSTDAEKYSADGYGTFAISFPHQGQVTVAKTLDFEKIQTY 226
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 66/156 (42%), Gaps = 21/156 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI------------Q 77
+ QV ATD D G +V Y + + + F ++ T QG +
Sbjct: 518 VTQVTATDNDEGPNAVVTYSIYHVSNNGIQKFTINETTGEIRTQGRLLAGEQYSITVQAT 577
Query: 78 DEGGLSSTATVNIRVT-DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAV 135
D GGLSS A V + VT N K P FQ YE V EG + V VHA D + +AV
Sbjct: 578 DIGGLSSQAIVEVSVTPGPNTKPPRFQKPIYEVQVSEGAEINSTVTVVHAEDPE--NDAV 635
Query: 136 VYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLY 169
VY + + F V +G I + LD E Y
Sbjct: 636 VYSIISGNDLRQFAVGQESGVIIVIRKLDRESLTRY 671
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI 144
TA+V + V D+ D+ P+F + +PE ++ V V A D D
Sbjct: 789 TASVTVMVLDLPDEVPKFSDARIDVHIPENEENFLVATVQAFDPDSMPEITYVLRKGNAE 848
Query: 145 PFVVDANTGDIRTNKALDYEKQQLY 169
F V +G++RT K LDYE Q+ +
Sbjct: 849 LFKVAEKSGEVRTIKGLDYESQKQH 873
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 83 SSTATVNIRVTDINDKNPEFQSL-PYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
S+ ++ + + D+ND P+ + P + + + V +V ATD DEG NAVV YS+
Sbjct: 480 SAPLSLTVHLRDVNDNAPKLAMVAPISITAGDQSESRLVTQVTATDNDEGPNAVVTYSIY 539
Query: 142 EDI-----PFVVDANTGDIRTNKAL 161
F ++ TG+IRT L
Sbjct: 540 HVSNNGIQKFTINETTGEIRTQGRL 564
Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 80/197 (40%), Gaps = 57/197 (28%)
Query: 29 LGVTLMQ-VKATDKDSGKFGLVEYRLLD---NNTDAASYF-----NLDPATEHQGPI--- 76
+G T+ + ++A DKD+G GLVEY + + N+TDA Y + HQG +
Sbjct: 156 VGTTIFRNIQALDKDAGVNGLVEYFIAEGSANSTDAEKYSADGYGTFAISFPHQGQVTVA 215
Query: 77 ----------------------QDEGGLSSTATVNIRVTDINDKNPEF-----QSL---- 105
LSST T+ + + D ND +P F SL
Sbjct: 216 KTLDFEKIQTYYLTIVASDRARNTADRLSSTTTLTVNIADSNDLDPSFIYSGCVSLDGAC 275
Query: 106 ---PYEFSVPEGQ--DGLAV--GRVHATDADEGQNAVVYYSVPEDIP------FVVDANT 152
Y SVP G L V R+ A D D N+ + YS +P F +D +T
Sbjct: 276 INPEYSASVPAGSLLGVLTVLPERIQAVDLDT-INSPIRYSFASGMPGNYADYFQIDEST 334
Query: 153 GDIRTNKALDYEKQQLY 169
G ++ KA+D + Y
Sbjct: 335 GVLKQTKAVDTSTAKKY 351
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 4/50 (8%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYF 64
FY + ++ ++ T++QV+ATD+DSG+FG V Y L D N +A + F
Sbjct: 1159 FY-TVVTEEMDVDTTILQVRATDRDSGRFGTVRYALYDDDENRVNAPTSF 1207
>gi|195503140|ref|XP_002098526.1| GE23891 [Drosophila yakuba]
gi|194184627|gb|EDW98238.1| GE23891 [Drosophila yakuba]
Length = 1705
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 73/95 (76%), Gaps = 2/95 (2%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQ--SLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
+D GGLSS+ATVNI+VTDINDKNPEF+ +LPY F V EG+ +VG VHATDADEG NA
Sbjct: 678 EDTGGLSSSATVNIKVTDINDKNPEFEASTLPYVFQVEEGKAQASVGVVHATDADEGINA 737
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ YS+P DIPF ++A +G+I T K LDYE+ Y
Sbjct: 738 EITYSIPTDIPFTINATSGEILTAKQLDYEQLNEY 772
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 47/103 (45%), Gaps = 18/103 (17%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR-VHATDADEGQNAVVYYSVPE 142
T + +RV+DIND P F + PYE +VPE G + R + A D D G N +V Y + E
Sbjct: 124 TIPIIVRVSDINDNAPRFMNTPYEVTVPESTPVGTTIFRNIQALDKDAGVNGLVEYFIAE 183
Query: 143 DIPFVVDA----------------NTGDIRTNKALDYEKQQLY 169
P D + G + K LD+EK Q Y
Sbjct: 184 GSPNSTDVEKYSADGYGTFAISFPHQGQVTVAKTLDFEKIQTY 226
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 66/156 (42%), Gaps = 21/156 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI------------Q 77
+ QV A+D D G +V Y + + + F ++ T QG +
Sbjct: 518 VTQVTASDNDEGPNAVVTYSIYHVSNNGIQKFTINETTGEIRTQGRLLAGEQYSITVQAT 577
Query: 78 DEGGLSSTATVNIRVT-DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAV 135
D GGLSS A V + VT N K P FQ YE V EG + V VHA D + +AV
Sbjct: 578 DIGGLSSQAIVEVSVTPGPNTKPPRFQKPIYEVQVSEGAEINSTVTVVHAEDPE--NDAV 635
Query: 136 VYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLY 169
VY + + F V +G I + LD E Y
Sbjct: 636 VYSIISGNDLRQFAVGQESGVIIVIRKLDRESLTRY 671
Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI 144
TA+V + V D+ D+ P+F + +PE ++ V V A D D
Sbjct: 789 TASVTVMVLDLPDEVPKFSDARIDVHIPENEENYLVATVQAFDPDSMPEITYVLRKGNAE 848
Query: 145 PFVVDANTGDIRTNKALDYEKQQLY 169
F V +G++RT K LDYE Q+ +
Sbjct: 849 LFKVAEKSGEVRTIKGLDYESQKQH 873
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 80/197 (40%), Gaps = 57/197 (28%)
Query: 29 LGVTLMQ-VKATDKDSGKFGLVEYRLLD---NNTD-----AASYFNLDPATEHQGPI--- 76
+G T+ + ++A DKD+G GLVEY + + N+TD A Y + HQG +
Sbjct: 156 VGTTIFRNIQALDKDAGVNGLVEYFIAEGSPNSTDVEKYSADGYGTFAISFPHQGQVTVA 215
Query: 77 ----------------------QDEGGLSSTATVNIRVTDINDKNPEF-----QSL---- 105
LSST T+ + V D ND +P F SL
Sbjct: 216 KTLDFEKIQTYYLTIVASDRARNTADRLSSTTTLTVNVADSNDLDPSFIYSGCVSLDGAC 275
Query: 106 ---PYEFSVPEGQ--DGLAV--GRVHATDADEGQNAVVYYSVPEDIP------FVVDANT 152
Y SVP G L V R+ A D D N+ + YS +P F +D NT
Sbjct: 276 INPEYSASVPAGSLLGVLTVLPERIQAVDLDT-INSPIRYSFASGMPGNYADYFQIDENT 334
Query: 153 GDIRTNKALDYEKQQLY 169
G ++ KA+D + Y
Sbjct: 335 GVLKQTKAVDTSTAKKY 351
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS 62
FY + ++ ++ T++QV+ATD+DSGKFG V Y L D++ + S
Sbjct: 1159 FY-TVVTEEMDVDTTILQVRATDRDSGKFGTVRYTLYDDDENRVS 1202
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 83 SSTATVNIRVTDINDKNPEFQSL-PYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
S+ ++ + + D+ND P+ + P + + + V +V A+D DEG NAVV YS+
Sbjct: 480 SAPLSLTVHLRDVNDNAPKLAMVAPISITAGDQSESRLVTQVTASDNDEGPNAVVTYSIY 539
Query: 142 EDI-----PFVVDANTGDIRTNKAL 161
F ++ TG+IRT L
Sbjct: 540 HVSNNGIQKFTINETTGEIRTQGRL 564
>gi|59936685|gb|AAX12106.1| cadherin 99C [Drosophila melanogaster]
gi|59936706|gb|AAX12107.1| cadherin 99C [Drosophila melanogaster]
Length = 1706
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 73/95 (76%), Gaps = 2/95 (2%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQ--SLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
+D GGLSS+ATVNI+VTDINDKNPEF+ +LPY F V EG+ +VG VHATDADEG NA
Sbjct: 679 EDTGGLSSSATVNIKVTDINDKNPEFEASTLPYVFQVEEGKAQASVGVVHATDADEGINA 738
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ YS+P DIPF ++A +G+I T K LDYE+ Y
Sbjct: 739 EITYSIPTDIPFTINATSGEILTAKELDYEQLNEY 773
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 18/107 (16%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR-VHATDADEGQNAVVYY 138
G T + +RV+DIND P F + PYE +VPE G + R + A D D G N +V Y
Sbjct: 121 GKKRTIPIIVRVSDINDNAPRFMNTPYEVTVPESTPVGTTIFRNIQALDKDAGVNGLVEY 180
Query: 139 SVPEDIP---------------FVVD-ANTGDIRTNKALDYEKQQLY 169
+ E P F + + G + K LD+EK Q Y
Sbjct: 181 FIAEGSPNSTNVEKYSADGYGTFAISFPHQGQVTVAKTLDFEKIQTY 227
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 66/156 (42%), Gaps = 21/156 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI------------Q 77
+ QV ATD D G +V Y + + + F ++ T QG +
Sbjct: 519 VTQVTATDNDEGPNAVVTYSIYHVSNNGIQKFTINATTGEIRTQGRLLAGEQYSITVQAT 578
Query: 78 DEGGLSSTATVNIRVT-DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAV 135
D GGLSS A V + VT N K P FQ YE V EG + V VHA D + +AV
Sbjct: 579 DIGGLSSQAIVEVSVTPGPNTKPPRFQKPIYEVQVSEGAEINSTVTVVHAEDPE--NDAV 636
Query: 136 VYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLY 169
VY + + F V +G I + LD E Y
Sbjct: 637 VYSIISGNDLRQFAVGQESGVIIVIRKLDRESLTRY 672
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI 144
TA+V + V D+ D+ P+F + +PE ++ V V A D D
Sbjct: 790 TASVTVMVLDLPDEVPKFSDARIDVHIPENEENFLVATVQAFDPDSMPEITYVLRKGNAE 849
Query: 145 PFVVDANTGDIRTNKALDYEKQQLY 169
F + +G++RT K LDYE Q+ +
Sbjct: 850 LFKISEKSGEVRTIKGLDYESQKQH 874
Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 83 SSTATVNIRVTDINDKNPEFQSL-PYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
S+ ++ + + D+ND P+ + P + + + V +V ATD DEG NAVV YS+
Sbjct: 481 SAPLSLTVHLRDVNDNAPKLAMVAPISITAGDQSESRLVTQVTATDNDEGPNAVVTYSIY 540
Query: 142 EDI-----PFVVDANTGDIRTNKAL 161
F ++A TG+IRT L
Sbjct: 541 HVSNNGIQKFTINATTGEIRTQGRL 565
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN 57
FY + ++ ++ T++QV+ATD+DSGKFG V Y L D++
Sbjct: 1160 FY-TVVTEEMDVDTTILQVRATDRDSGKFGTVRYTLYDDD 1198
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 80/197 (40%), Gaps = 57/197 (28%)
Query: 29 LGVTLMQ-VKATDKDSGKFGLVEYRLLD---NNTD-----AASYFNLDPATEHQGPI--- 76
+G T+ + ++A DKD+G GLVEY + + N+T+ A Y + HQG +
Sbjct: 157 VGTTIFRNIQALDKDAGVNGLVEYFIAEGSPNSTNVEKYSADGYGTFAISFPHQGQVTVA 216
Query: 77 ----------------------QDEGGLSSTATVNIRVTDINDKNPEF-----QSL---- 105
LSST T+ + + D ND +P F SL
Sbjct: 217 KTLDFEKIQTYYLTIVASDRARNTADRLSSTTTLTVNIADSNDLDPSFIYSGCVSLDGAC 276
Query: 106 ---PYEFSVPEGQ--DGLAV--GRVHATDADEGQNAVVYYSVPEDIP------FVVDANT 152
Y SVP G L V R+ A D D N+ + YS +P F +D +T
Sbjct: 277 INPEYSASVPAGSLLGVLTVLPERIQAVDLDT-INSPIRYSFASGMPGNYADYFQIDEST 335
Query: 153 GDIRTNKALDYEKQQLY 169
G ++ KA+D + Y
Sbjct: 336 GVLKQTKAVDTSTAKKY 352
>gi|24651170|ref|NP_733314.1| cadherin 99C, isoform A [Drosophila melanogaster]
gi|320543453|ref|NP_001189311.1| cadherin 99C, isoform B [Drosophila melanogaster]
gi|23172606|gb|AAF56955.2| cadherin 99C, isoform A [Drosophila melanogaster]
gi|318068893|gb|ADV37401.1| cadherin 99C, isoform B [Drosophila melanogaster]
Length = 1706
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 73/95 (76%), Gaps = 2/95 (2%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQ--SLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
+D GGLSS+ATVNI+VTDINDKNPEF+ +LPY F V EG+ +VG VHATDADEG NA
Sbjct: 679 EDTGGLSSSATVNIKVTDINDKNPEFEASTLPYVFQVEEGKAQASVGVVHATDADEGINA 738
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ YS+P DIPF ++A +G+I T K LDYE+ Y
Sbjct: 739 EITYSIPTDIPFTINATSGEILTAKELDYEQLNEY 773
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 18/107 (16%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR-VHATDADEGQNAVVYY 138
G T + +RV+DIND P F + PYE +VPE G + R + A D D G N +V Y
Sbjct: 121 GKKRTIPIIVRVSDINDNAPRFMNTPYEVTVPESTPVGTTIFRNIQALDKDAGVNGLVEY 180
Query: 139 SVPEDIP---------------FVVD-ANTGDIRTNKALDYEKQQLY 169
+ E P F + + G + K LD+EK Q Y
Sbjct: 181 FIAEGSPNSTNVEKYSADGYGTFAISFPHQGQVTVAKTLDFEKIQTY 227
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 66/156 (42%), Gaps = 21/156 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI------------Q 77
+ QV ATD D G +V Y + + + F ++ T QG +
Sbjct: 519 VTQVTATDNDEGPNAVVTYSIYHVSNNGIQKFTINATTGEIRTQGRLLAGEQYSITVQAT 578
Query: 78 DEGGLSSTATVNIRVT-DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAV 135
D GGLSS A V + VT N K P FQ YE V EG + V VHA D + +AV
Sbjct: 579 DIGGLSSQAIVEVSVTPGPNTKPPRFQKPIYEVQVSEGAEINSTVTVVHAEDPE--NDAV 636
Query: 136 VYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLY 169
VY + + F V +G I + LD E Y
Sbjct: 637 VYSIISGNDLRQFAVGQESGVIIVIRKLDRESLTRY 672
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI 144
TA+V + V D+ D+ P+F + +PE ++ V V A D D
Sbjct: 790 TASVTVMVLDLPDEVPKFSDARIDVHIPENEENFLVATVQAFDPDSMPEITYVLRKGNAE 849
Query: 145 PFVVDANTGDIRTNKALDYEKQQLY 169
F V +G++RT K LDYE Q+ +
Sbjct: 850 LFKVSEKSGEVRTIKGLDYESQKQH 874
Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 83 SSTATVNIRVTDINDKNPEFQSL-PYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
S+ ++ + + D+ND P+ + P + + + V +V ATD DEG NAVV YS+
Sbjct: 481 SAPLSLTVHLRDVNDNAPKLAMVAPISITAGDQSESRLVTQVTATDNDEGPNAVVTYSIY 540
Query: 142 EDI-----PFVVDANTGDIRTNKAL 161
F ++A TG+IRT L
Sbjct: 541 HVSNNGIQKFTINATTGEIRTQGRL 565
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN 57
FY + ++ ++ T++QV+ATD+DSGKFG V Y L D++
Sbjct: 1160 FY-TVVTEEMDVDTTILQVRATDRDSGKFGTVRYTLYDDD 1198
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 80/197 (40%), Gaps = 57/197 (28%)
Query: 29 LGVTLMQ-VKATDKDSGKFGLVEYRLLD---NNTD-----AASYFNLDPATEHQGPI--- 76
+G T+ + ++A DKD+G GLVEY + + N+T+ A Y + HQG +
Sbjct: 157 VGTTIFRNIQALDKDAGVNGLVEYFIAEGSPNSTNVEKYSADGYGTFAISFPHQGQVTVA 216
Query: 77 ----------------------QDEGGLSSTATVNIRVTDINDKNPEF-----QSL---- 105
LSST T+ + + D ND +P F SL
Sbjct: 217 KTLDFEKIQTYYLTIVASDRARNTADRLSSTTTLTVNIADSNDLDPSFIYSGCVSLDGAC 276
Query: 106 ---PYEFSVPEGQ--DGLAV--GRVHATDADEGQNAVVYYSVPEDIP------FVVDANT 152
Y SVP G L V R+ A D D N+ + YS +P F +D +T
Sbjct: 277 INPEYSASVPAGSLLGVLTVLPERIQAVDLDT-INSPIRYSFASGMPGNYADYFQIDEST 335
Query: 153 GDIRTNKALDYEKQQLY 169
G ++ KA+D + Y
Sbjct: 336 GVLKQTKAVDTSTAKKY 352
>gi|54650730|gb|AAV36944.1| LP14319p [Drosophila melanogaster]
Length = 1691
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 73/95 (76%), Gaps = 2/95 (2%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQ--SLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
+D GGLSS+ATVNI+VTDINDKNPEF+ +LPY F V EG+ +VG VHATDADEG NA
Sbjct: 664 EDTGGLSSSATVNIKVTDINDKNPEFEASTLPYVFQVEEGKAQASVGVVHATDADEGINA 723
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ YS+P DIPF ++A +G+I T K LDYE+ Y
Sbjct: 724 EITYSIPTDIPFTINATSGEILTAKELDYEQLNEY 758
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 18/107 (16%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR-VHATDADEGQNAVVYY 138
G T + +RV+DIND P F + PYE +VPE G + R + A D D G N +V Y
Sbjct: 106 GKKRTIPIIVRVSDINDNAPRFMNTPYEVTVPESTPVGTTIFRNIQALDKDAGVNGLVEY 165
Query: 139 SVPEDIP---------------FVVD-ANTGDIRTNKALDYEKQQLY 169
+ E P F + + G + K LD+EK Q Y
Sbjct: 166 FIAEGSPNSTNVEKYSADGYGTFAISFPHQGQVTVAKTLDFEKIQTY 212
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 66/156 (42%), Gaps = 21/156 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI------------Q 77
+ QV ATD D G +V Y + + + F ++ T QG +
Sbjct: 504 VTQVTATDNDEGPNAVVTYSIYHVSNNGIQKFTINATTGEIRTQGRLLAGEQYSITVQAT 563
Query: 78 DEGGLSSTATVNIRVT-DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAV 135
D GGLSS A V + VT N K P FQ YE V EG + V VHA D + +AV
Sbjct: 564 DIGGLSSQAIVEVSVTPGPNTKPPRFQKPIYEVQVSEGAEINSTVTVVHAEDPE--NDAV 621
Query: 136 VYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLY 169
VY + + F V +G I + LD E Y
Sbjct: 622 VYSIISGNDLRQFAVGQESGVIIVIRKLDRESLTRY 657
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI 144
TA+V + V D+ D+ P+F + +PE ++ V V A D D
Sbjct: 775 TASVTVMVLDLPDEVPKFSDARIDVHIPENEENFLVATVQAFDPDSMPEITYVLRKGNAE 834
Query: 145 PFVVDANTGDIRTNKALDYEKQQLY 169
F V +G++RT K LDYE Q+ +
Sbjct: 835 LFKVSEKSGEVRTIKGLDYESQKQH 859
Score = 42.7 bits (99), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 83 SSTATVNIRVTDINDKNPEFQSL-PYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
S+ ++ + + D+ND P+ + P + + + V +V ATD DEG NAVV YS+
Sbjct: 466 SAPLSLTVHLRDVNDNAPKLAMVAPISITAGDQSESRLVTQVTATDNDEGPNAVVTYSIY 525
Query: 142 EDI-----PFVVDANTGDIRTNKAL 161
F ++A TG+IRT L
Sbjct: 526 HVSNNGIQKFTINATTGEIRTQGRL 550
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN 57
FY + ++ ++ T++QV+ATD+DSGKFG V Y L D++
Sbjct: 1145 FY-TVVTEEMDVDTTILQVRATDRDSGKFGTVRYTLYDDD 1183
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 80/197 (40%), Gaps = 57/197 (28%)
Query: 29 LGVTLMQ-VKATDKDSGKFGLVEYRLLD---NNTD-----AASYFNLDPATEHQGPI--- 76
+G T+ + ++A DKD+G GLVEY + + N+T+ A Y + HQG +
Sbjct: 142 VGTTIFRNIQALDKDAGVNGLVEYFIAEGSPNSTNVEKYSADGYGTFAISFPHQGQVTVA 201
Query: 77 ----------------------QDEGGLSSTATVNIRVTDINDKNPEF-----QSL---- 105
LSST T+ + + D ND +P F SL
Sbjct: 202 KTLDFEKIQTYYLTIVASDRARNTADRLSSTTTLTVNIADSNDLDPSFIYSGCVSLDGAC 261
Query: 106 ---PYEFSVPEGQ--DGLAV--GRVHATDADEGQNAVVYYSVPEDIP------FVVDANT 152
Y SVP G L V R+ A D D N+ + YS +P F +D +T
Sbjct: 262 INPEYSASVPAGSLLGVLTVLPERIQAVDLDT-INSPIRYSFASGMPGNYADYFQIDEST 320
Query: 153 GDIRTNKALDYEKQQLY 169
G ++ KA+D + Y
Sbjct: 321 GVLKQTKAVDTSTAKKY 337
>gi|195341325|ref|XP_002037261.1| GM12831 [Drosophila sechellia]
gi|194131377|gb|EDW53420.1| GM12831 [Drosophila sechellia]
Length = 1347
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 73/95 (76%), Gaps = 2/95 (2%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQ--SLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
+D GGLSS+ATVNI+VTDINDKNPEF+ +LPY F V EG+ +VG VHATDADEG NA
Sbjct: 320 EDTGGLSSSATVNIKVTDINDKNPEFEASTLPYVFQVEEGKAQASVGVVHATDADEGINA 379
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ YS+P DIPF ++A +G+I T K LDYE+ Y
Sbjct: 380 EITYSIPTDIPFTINATSGEILTAKELDYEQLNEY 414
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 66/156 (42%), Gaps = 21/156 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI------------Q 77
+ QV ATD D G +V Y + + + F ++ T QG +
Sbjct: 160 VTQVTATDNDEGPNAVVTYSIYHVSNNGIQKFTINETTGEIRTQGRLLAGEQYSITVQAT 219
Query: 78 DEGGLSSTATVNIRVT-DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAV 135
D GGLSS A V + VT N K P FQ YE V EG + V VHA D + +AV
Sbjct: 220 DIGGLSSQAIVEVSVTPGPNTKPPRFQKPIYEVQVSEGAEINSTVTVVHAEDPE--NDAV 277
Query: 136 VYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLY 169
VY + + F V +G I + LD E Y
Sbjct: 278 VYSIISGNDLRQFAVGQESGVIIVIRKLDRESLTRY 313
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI 144
TA+V + V D+ D+ P+F + +PE ++ V V A D D
Sbjct: 431 TASVTVMVLDLPDEVPKFSDARIDVHIPENEENFLVATVQAFDPDSMPEITYVLRKGNAE 490
Query: 145 PFVVDANTGDIRTNKALDYEKQQLY 169
F V +G++RT K LDYE Q+ +
Sbjct: 491 LFKVSEKSGEVRTIKGLDYESQKQH 515
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 83 SSTATVNIRVTDINDKNPEFQSL-PYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
S+ ++ + + D+ND P+ + P + + + V +V ATD DEG NAVV YS+
Sbjct: 122 SAPLSLTVHLRDVNDNAPKLAMVAPISITAGDQSESRLVTQVTATDNDEGPNAVVTYSIY 181
Query: 142 EDI-----PFVVDANTGDIRTNKAL 161
F ++ TG+IRT L
Sbjct: 182 HVSNNGIQKFTINETTGEIRTQGRL 206
Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN 57
FY + ++ ++ T++QV+ATD+DSGKFG V Y L D++
Sbjct: 801 FY-TVVTEEMDVDTTILQVRATDRDSGKFGNVRYTLYDDD 839
>gi|194745576|ref|XP_001955263.1| GF18671 [Drosophila ananassae]
gi|190628300|gb|EDV43824.1| GF18671 [Drosophila ananassae]
Length = 1704
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 72/95 (75%), Gaps = 2/95 (2%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEF--QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
+D GGLSS+ATVNI+VTDINDKNPEF +LPY F V EG+ +VG VHATDADEG NA
Sbjct: 678 EDTGGLSSSATVNIKVTDINDKNPEFDASTLPYIFQVDEGKAQASVGVVHATDADEGINA 737
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ YS+P DIPF ++A +G+I+T K LDYE Y
Sbjct: 738 EITYSIPTDIPFTINATSGEIQTAKELDYETLNEY 772
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 45/98 (45%), Gaps = 18/98 (18%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR-VHATDADEGQNAVVYYSVPE----- 142
+RV+DIND P F + PYE +VPE G + R + A D D G N +V Y + E
Sbjct: 129 VRVSDINDNAPRFMNTPYEVTVPESTPVGTTIFRNIQALDKDAGVNGLVEYFIAEGHVNA 188
Query: 143 --DIPFVVDA---------NTGDIRTNKALDYEKQQLY 169
+ F D + G + K LDYEK Y
Sbjct: 189 TDEEKFSADGYGTFSISFPHQGQVTVAKTLDYEKIHRY 226
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 71/166 (42%), Gaps = 27/166 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI------------Q 77
+ QV ATD D G +V Y + + + F +D T QG +
Sbjct: 518 VTQVVATDNDEGPNAVVTYTIYHVSNNGIQKFTIDRETGEIRTQGRLLAGEQYSITVQAT 577
Query: 78 DEGGLSSTATVNIRVT-DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAV 135
D GGLSS A V + VT N K P FQ YE V EG + V VH AD+ +N
Sbjct: 578 DIGGLSSQAIVEVSVTPGPNTKPPRFQKPIYEVQVSEGAEINSTVTVVH---ADDPENDD 634
Query: 136 VYYSV--PEDI-PFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
V YS+ D+ F V +G I + LD E L R LI K
Sbjct: 635 VVYSIISGNDLRQFAVGQESGVIVVIRKLDRES----LTRYQLIVK 676
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI 144
TA+V + V D+ D+ P+F + +PE ++ V V A D D +
Sbjct: 789 TASVTVMVLDLPDEVPKFSDARIDVHIPENEENFLVATVQAFDPDSLPEITYVLRKGDAE 848
Query: 145 PFVVDANTGDIRTNKALDYEKQQLY 169
F V +G++RT K LDYE Q+ +
Sbjct: 849 LFKVSPKSGEVRTVKGLDYETQKQH 873
Score = 42.4 bits (98), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA----SYF 64
FY + D ++ T++QV+ATD+DSGKFG V Y L D + + SYF
Sbjct: 1159 FYAVVTED-MDVDTTILQVRATDRDSGKFGTVRYALYDEDENRVNMPTSYF 1208
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 83 SSTATVNIRVTDINDKNPEFQSL-PYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
S+ ++ + + D+ND P+ + P + + + V +V ATD DEG NAVV Y++
Sbjct: 480 SAPLSLTVHLKDVNDNAPKLAMVSPISITAGDQSESRLVTQVVATDNDEGPNAVVTYTIY 539
Query: 142 EDI-----PFVVDANTGDIRTNKAL 161
F +D TG+IRT L
Sbjct: 540 HVSNNGIQKFTIDRETGEIRTQGRL 564
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 78/197 (39%), Gaps = 57/197 (28%)
Query: 29 LGVTLMQ-VKATDKDSGKFGLVEYRLLDNNTDAA--------SYFNLDPATEHQGPI--- 76
+G T+ + ++A DKD+G GLVEY + + + +A Y + HQG +
Sbjct: 156 VGTTIFRNIQALDKDAGVNGLVEYFIAEGHVNATDEEKFSADGYGTFSISFPHQGQVTVA 215
Query: 77 -----------------QDEGG-----LSSTATVNIRVTDINDKNPEF-----QSL---- 105
D LSST T+ + + D ND +P F SL
Sbjct: 216 KTLDYEKIHRYYLTIIASDRARNVADRLSSTTTLTVNIADSNDLDPSFIYSGCVSLDGAC 275
Query: 106 ---PYEFSVPEGQ--DGLAV--GRVHATDADEGQNAVVYYSVPEDIP------FVVDANT 152
Y SVP G L V R+ A D D + + YS +P F +D NT
Sbjct: 276 INPEYTASVPAGSLLGVLTVLPERIQAVDLDT-IGSPIRYSFASGMPGNYADYFQIDENT 334
Query: 153 GDIRTNKALDYEKQQLY 169
G ++ KA+D + Y
Sbjct: 335 GVLKQTKAIDTSTAKKY 351
>gi|195108383|ref|XP_001998772.1| GI23447 [Drosophila mojavensis]
gi|193915366|gb|EDW14233.1| GI23447 [Drosophila mojavensis]
Length = 1684
Score = 115 bits (289), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 70/95 (73%), Gaps = 2/95 (2%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSL--PYEFSVPEGQDGLAVGRVHATDADEGQNA 134
+D GGLSS+ATVNI+VTDINDKNPEF L PY F V EG D VG VHATDADEG NA
Sbjct: 649 EDNGGLSSSATVNIKVTDINDKNPEFDELTQPYVFHVDEGLDDAFVGIVHATDADEGINA 708
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ YS+P DIPF ++ +G+IRT+ LDYE+ Y
Sbjct: 709 EITYSIPTDIPFSINNKSGEIRTSDKLDYERLSEY 743
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 47/106 (44%), Gaps = 33/106 (31%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR-VHATDADEGQNAVVYYSVPEDIPFV 147
+RV+D+ND P F + PYE +VPE G V R + A D D G N +V Y F+
Sbjct: 99 VRVSDVNDNAPHFMNTPYEITVPESTPLGTTVYRNIQALDKDAGVNGLVEY-------FI 151
Query: 148 V--DANT----------------------GDIRTNKALDYEKQQLY 169
V DAN+ G + K LDYEK Q Y
Sbjct: 152 VKGDANSTEDEKLTSADGYGTFAISFPHQGQVTVAKTLDYEKIQRY 197
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI 144
TA+V + + D+ D+ P+F +PE + V V A D D +
Sbjct: 760 TASVTVIIHDLPDEVPKFNDASINVRIPENMENFPVATVQAHDPDSVPEITYVLRKGDAE 819
Query: 145 PFVVDANTGDIRTNKALDYEKQQLY 169
F V TG++RT K LDYEK+Q +
Sbjct: 820 LFRVSPKTGEVRTTKGLDYEKKQQH 844
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 78/176 (44%), Gaps = 28/176 (15%)
Query: 23 ARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI--- 76
A D+HE + + Q+ ATD D G +V Y + + + F+++ T QG +
Sbjct: 480 AGDEHEQRL-VAQMMATDIDEGPNAVVTYSIYHVSNNGLQKFHINEQTGEIHTQGRLLAG 538
Query: 77 ---------QDEGGLSSTATVNIRVT-DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHA 125
D GGLSS A V + VT N K P F + YE V EG + V VH
Sbjct: 539 EQYSITVQATDIGGLSSQAIVEVTVTPGPNTKPPRFTNALYEVQVSEGAEINSTVTVVH- 597
Query: 126 TDADEGQNAVVYYSV--PEDI-PFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
AD+ +N V YS+ D+ F V +G I + LD E L R LI K
Sbjct: 598 --ADDPENDPVVYSIMSGNDLRQFSVGQQSGIIMVIRKLDRES----LTRYQLIVK 647
Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-------NNTDAASYFNL 66
Y A+ + ++ T++QV+A D+DSGKFG + Y+L D N+ ++YF L
Sbjct: 1132 YYAVVTPEMDIDTTVLQVRAIDRDSGKFGSLRYKLYDEEDFSNENDQLPSTYFRL 1186
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 83 SSTATVNIRVTDINDKNPEFQSL-PYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
S+ ++ + + D+ND P+ + P S + + V ++ ATD DEG NAVV YS+
Sbjct: 451 SAPLSLTVHLRDVNDNAPKLAMVAPVSISAGDEHEQRLVAQMMATDIDEGPNAVVTYSIY 510
Query: 142 EDI-----PFVVDANTGDIRTNKAL 161
F ++ TG+I T L
Sbjct: 511 HVSNNGLQKFHINEQTGEIHTQGRL 535
>gi|195159270|ref|XP_002020505.1| GL14031 [Drosophila persimilis]
gi|194117274|gb|EDW39317.1| GL14031 [Drosophila persimilis]
Length = 1115
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 69/95 (72%), Gaps = 2/95 (2%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEF--QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
+D GGLSS+ATVNI+VTDINDKNPEF +LPY F V EG VG VHATDADEG NA
Sbjct: 75 EDSGGLSSSATVNIKVTDINDKNPEFDVSTLPYVFQVDEGTADAFVGVVHATDADEGINA 134
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ YS+P D+PF ++ +G++RT LDYE+ Y
Sbjct: 135 EITYSIPTDVPFTINGTSGELRTASQLDYERLNEY 169
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI 144
TA+V + V DI D+ P+F + +PE ++ V V A D D +
Sbjct: 186 TASVTVLVHDIPDEVPKFSDARIDVHIPENEESFLVATVQAFDPDTISEITYVLRKGDAE 245
Query: 145 PFVVDANTGDIRTNKALDYEKQQLY 169
F V A TG++ T K LDYE Q+ +
Sbjct: 246 LFKVSATTGEVHTIKGLDYENQRQH 270
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN 56
FY + D ++ T++QV+ATD+DSGKFGLV Y+L D+
Sbjct: 556 FYTVVTSDM-DVDTTILQVRATDRDSGKFGLVRYKLYDD 593
>gi|125772752|ref|XP_001357648.1| GA15934 [Drosophila pseudoobscura pseudoobscura]
gi|54637380|gb|EAL26782.1| GA15934 [Drosophila pseudoobscura pseudoobscura]
Length = 1722
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 69/95 (72%), Gaps = 2/95 (2%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEF--QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
+D GGLSS+ATVNI+VTDINDKNPEF +LPY F V EG VG VHATDADEG NA
Sbjct: 682 EDSGGLSSSATVNIKVTDINDKNPEFDVSTLPYVFQVDEGTADAFVGVVHATDADEGINA 741
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ YS+P D+PF ++ +G++RT LDYE+ Y
Sbjct: 742 EITYSIPTDVPFTINGTSGELRTASQLDYERLNEY 776
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 19/100 (19%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR-VHATDADEGQNAVVYYSVPEDI--- 144
+RV+DIND P F + PYE +VPE G + R + A D D G N +V Y + E
Sbjct: 130 VRVSDINDNAPRFMNTPYEVTVPESTPVGTTIFRNIQALDKDAGVNGLVEYFIAEQSINA 189
Query: 145 -------------PFVVD-ANTGDIRTNKALDYEKQQLYL 170
F + + G + +K LDYEK Q Y
Sbjct: 190 TEDEKLTSADGYGTFAISFPHQGQVTVSKILDYEKVQRYF 229
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 66/160 (41%), Gaps = 29/160 (18%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
+ QV A D D G +V Y + + + F +D E G I+
Sbjct: 522 VTQVTAIDNDEGPNAVVAYSIYHVSNNGIQKFTID---EQTGEIRTHGRLLAGEQYSITV 578
Query: 78 ---DEGGLSSTATVNIRVT-DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D GGLSS A V + VT N K P FQ YE V EG + V VH AD+ +
Sbjct: 579 QATDIGGLSSQAIVEVSVTPGPNTKPPRFQKPIYEVQVSEGAEINSTVTVVH---ADDPE 635
Query: 133 NAVVYYSV--PEDI-PFVVDANTGDIRTNKALDYEKQQLY 169
N V YS+ D+ F V TG I + LD E Y
Sbjct: 636 NDAVVYSIISGNDLRQFAVGQETGVIIVIRKLDRESLTRY 675
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI 144
TA+V + V DI D+ P+F + +PE ++ V V A D D +
Sbjct: 793 TASVTVLVHDIPDEVPKFSDARIDVHIPENEESFLVATVQAFDPDTISEITYVLRKGDAE 852
Query: 145 PFVVDANTGDIRTNKALDYEKQQLY 169
F V A TG++ T K LDYE Q+ +
Sbjct: 853 LFKVSATTGEVHTIKGLDYENQRQH 877
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN 56
FY + D ++ T++QV+ATD+DSGKFGLV Y+L D+
Sbjct: 1163 FYTVVTSDM-DVDTTILQVRATDRDSGKFGLVRYKLYDD 1200
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 83 SSTATVNIRVTDINDKNPEFQSL-PYEFSVPEG--QDGLAVGRVHATDADEGQNAVVYYS 139
S+ ++ + + DIND P+ + P + G + V +V A D DEG NAVV YS
Sbjct: 482 SAPLSLTVHLRDINDNAPKLAMVSPIAITANSGDQSESRLVTQVTAIDNDEGPNAVVAYS 541
Query: 140 VPEDI-----PFVVDANTGDIRTNKAL 161
+ F +D TG+IRT+ L
Sbjct: 542 IYHVSNNGIQKFTIDEQTGEIRTHGRL 568
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 77/199 (38%), Gaps = 60/199 (30%)
Query: 29 LGVTLMQ-VKATDKDSGKFGLVEYRLLDNN---------TDAASYFNLDPATEHQGPI-- 76
+G T+ + ++A DKD+G GLVEY + + + T A Y + HQG +
Sbjct: 157 VGTTIFRNIQALDKDAGVNGLVEYFIAEQSINATEDEKLTSADGYGTFAISFPHQGQVTV 216
Query: 77 -----------------------QDEGGLSSTATVNIRVTDINDKNPEF----------- 102
E LSST T+ + + D +D +P F
Sbjct: 217 SKILDYEKVQRYFVTIVASDRARNTEHRLSSTTTLTVNIADSDDLDPSFIYRGCVSVEGA 276
Query: 103 -QSLPYEFSVPEGQDGLAV-----GRVHATDADEGQNAVVYYSVPEDIP------FVVDA 150
+ Y SVP G L V R+ A D D N+ + YS +P F +D
Sbjct: 277 CINPEYTASVPAGS-LLGVLNVLPERIQAVDLDT-INSRIRYSFASGMPGNYEDYFEIDE 334
Query: 151 NTGDIRTNKALDYEKQQLY 169
TG ++ KA+D + Y
Sbjct: 335 ETGVLKQTKAIDTSTAKRY 353
>gi|225581190|gb|ACN94758.1| GA15934 [Drosophila miranda]
Length = 1722
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 69/95 (72%), Gaps = 2/95 (2%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEF--QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
+D GGLSS+ATVNI+VTDINDKNPEF +LPY F V EG VG VHATDADEG NA
Sbjct: 682 EDSGGLSSSATVNIKVTDINDKNPEFDVSTLPYVFQVDEGTADAFVGVVHATDADEGINA 741
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ YS+P D+PF ++ +G++RT LDYE+ Y
Sbjct: 742 EITYSIPTDVPFTINGTSGELRTASQLDYERLNEY 776
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 19/100 (19%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR-VHATDADEGQNAVVYYSVPEDI--- 144
+RV+DIND P F + PYE +VPE G + R + A D D G N +V Y + E
Sbjct: 130 VRVSDINDNAPRFMNTPYEVTVPESTPVGTTIFRNIQALDKDAGVNGLVEYFIAEQSINA 189
Query: 145 -------------PFVVD-ANTGDIRTNKALDYEKQQLYL 170
F + + G + +K LDYEK Q Y
Sbjct: 190 TEDEKLTSADGYGTFAISFPHQGQVTVSKILDYEKVQRYF 229
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 66/160 (41%), Gaps = 29/160 (18%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
+ QV A D D G +V Y + + + F +D E G I+
Sbjct: 522 VTQVTAIDNDEGPNAVVAYSIYHVSNNGIQKFTID---EQTGEIRTHGRLLAGEQYSITV 578
Query: 78 ---DEGGLSSTATVNIRVT-DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D GGLSS A V + VT N K P FQ YE V EG + V VH AD+ +
Sbjct: 579 QATDIGGLSSQAIVEVSVTPGPNTKPPRFQKPIYEVQVSEGAEINSTVTVVH---ADDPE 635
Query: 133 NAVVYYSV--PEDI-PFVVDANTGDIRTNKALDYEKQQLY 169
N V YS+ D+ F V TG I + LD E Y
Sbjct: 636 NDAVVYSIISGNDLRQFAVGQETGVIIVIRKLDRESLTRY 675
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI 144
TA+V + V DI D+ P+F + +PE ++ V V A D D +
Sbjct: 793 TASVTVLVHDIPDEVPKFSDARIDVHIPENEESFLVATVQAFDPDTIPEITYVLRKGDAE 852
Query: 145 PFVVDANTGDIRTNKALDYEKQQLY 169
F V A TG++ T K LDYE Q+ +
Sbjct: 853 LFKVSATTGEVHTIKGLDYENQRQH 877
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN 56
FY + D ++ T++QV+ATD+DSGKFGLV Y+L D+
Sbjct: 1163 FYTVVTSDM-DVDTTILQVRATDRDSGKFGLVRYKLYDD 1200
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 83 SSTATVNIRVTDINDKNPEFQSL-PYEFSVPEG--QDGLAVGRVHATDADEGQNAVVYYS 139
S+ ++ + + DIND P+ + P + G + V +V A D DEG NAVV YS
Sbjct: 482 SAPLSLTVHLRDINDNAPKLAMVSPIAITANSGDQSESRLVTQVTAIDNDEGPNAVVAYS 541
Query: 140 VPEDI-----PFVVDANTGDIRTNKAL 161
+ F +D TG+IRT+ L
Sbjct: 542 IYHVSNNGIQKFTIDEQTGEIRTHGRL 568
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 76/198 (38%), Gaps = 58/198 (29%)
Query: 29 LGVTLMQ-VKATDKDSGKFGLVEYRLLDNN---------TDAASYFNLDPATEHQGPI-- 76
+G T+ + ++A DKD+G GLVEY + + + T A Y + HQG +
Sbjct: 157 VGTTIFRNIQALDKDAGVNGLVEYFIAEQSINATEDEKLTSADGYGTFAISFPHQGQVTV 216
Query: 77 -----------------------QDEGGLSSTATVNIRVTDINDKNPEF----------- 102
E LSST T+ + + D +D +P F
Sbjct: 217 SKILDYEKVQRYFVTIVASDRARNTEHRLSSTTTLTVNIADSDDLDPSFIYRGCVSVEGA 276
Query: 103 -QSLPYEFSVPEGQ----DGLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDAN 151
+ Y SVP G + R+ A D D N+ + YS +P F +D
Sbjct: 277 CINPEYTASVPAGSLLGVLNVLPERIQAVDLDT-INSRIRYSFASGMPGNYEDYFEIDEE 335
Query: 152 TGDIRTNKALDYEKQQLY 169
TG ++ KA+D + Y
Sbjct: 336 TGVLKQTKAIDTSTAKRY 353
>gi|195389138|ref|XP_002053234.1| GJ23774 [Drosophila virilis]
gi|194151320|gb|EDW66754.1| GJ23774 [Drosophila virilis]
Length = 1731
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 69/95 (72%), Gaps = 2/95 (2%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSL--PYEFSVPEGQDGLAVGRVHATDADEGQNA 134
+D GGLSS+ATVNI+VTDINDKNPEF + PY F V EG VG VHATDADEG NA
Sbjct: 684 EDNGGLSSSATVNIKVTDINDKNPEFDEITQPYVFHVDEGLQDAFVGIVHATDADEGVNA 743
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ YS+P DIPF ++ +G+IRT+ LD+E+ Y
Sbjct: 744 EITYSIPTDIPFSINNKSGEIRTSDKLDFERLNEY 778
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 20/101 (19%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR-VHATDADEGQNAVV-YYSVPEDIPF 146
+RV+D+ND P F + PYE +VPE G V R + A D D G N +V Y+ V +I
Sbjct: 134 VRVSDVNDNAPHFMNTPYEITVPESTPLGTTVYRNIQALDKDAGVNGLVEYFIVKGNINM 193
Query: 147 VVD----------------ANTGDIRTNKALDYEK-QQLYL 170
D + G + K LDYEK Q+ YL
Sbjct: 194 TEDDKLTSADGFGTFAISFPHQGQVTVAKTLDYEKIQRFYL 234
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI 144
TA+V + V D+ D+ P+F +PE V V A D D +
Sbjct: 795 TASVTVVVHDLPDEVPKFNDASISVRIPENMPNFLVATVQAHDPDSTPEITYVLRKGDAE 854
Query: 145 PFVVDANTGDIRTNKALDYEKQQLY 169
F V +TG+IRT K LDYEKQQ +
Sbjct: 855 LFKVFPDTGEIRTTKGLDYEKQQQH 879
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 74/170 (43%), Gaps = 30/170 (17%)
Query: 23 ARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ----- 77
A D+HE + + Q+ ATD D G +V Y + + + F+++ E G IQ
Sbjct: 515 AGDQHEQRL-VAQMMATDIDEGANAVVTYSIYHVSNNGMQKFHIN---EQTGEIQTRGRL 570
Query: 78 -------------DEGGLSSTATVNIRVT-DINDKNPEFQSLPYEFSVPEGQD-GLAVGR 122
D GGLSS A V + VT N K P F + YE V EG + V
Sbjct: 571 LAGEQYSITVQATDIGGLSSQAIVEVTVTPGPNTKPPRFTHMLYEVQVSEGAEINSTVTV 630
Query: 123 VHATDADEGQNAVVYYSV--PEDI-PFVVDANTGDIRTNKALDYEKQQLY 169
VH AD+ +N V YS+ D+ F V +G I + LD E Y
Sbjct: 631 VH---ADDPENDPVVYSIISGNDLRQFSVGQQSGVIMVIRKLDRESLTRY 677
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-----NNTDAASYFNL 66
Y A+ + ++ T++QV+A D+DSGKFGL+ Y+L D N ++YF L
Sbjct: 1167 YYAIVTPEMDVDTTILQVRAIDRDSGKFGLLRYKLYDEEDFRNENLPSTYFML 1219
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 83 SSTATVNIRVTDINDKNPEFQSL-PYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
S+ ++ + + D+ND P+ + P S + + V ++ ATD DEG NAVV YS+
Sbjct: 486 SAPLSLTVHLRDVNDNAPKLAMVAPISISAGDQHEQRLVAQMMATDIDEGANAVVTYSIY 545
Query: 142 EDI-----PFVVDANTGDIRTNKAL 161
F ++ TG+I+T L
Sbjct: 546 HVSNNGMQKFHINEQTGEIQTRGRL 570
>gi|321472651|gb|EFX83620.1| hypothetical protein DAPPUDRAFT_301624 [Daphnia pulex]
Length = 1627
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 62/94 (65%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVV 136
+D GGLSS A V +RV D ND++PEF LPY F V E +GRVHA DAD +N +
Sbjct: 720 EDTGGLSSVAQVMVRVLDTNDRSPEFIDLPYIFRVKENDLTGYIGRVHAKDADIEKNGQI 779
Query: 137 YYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
Y +P D FV+++ TG++++ LDYEK +++L
Sbjct: 780 TYFLPADENFVINSQTGELKSKAPLDYEKDRVHL 813
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 94 DINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI-PFVVDANT 152
D D+ P+F YE VPE V +V ATD D +++V Y D F +D +
Sbjct: 838 DFPDERPKFSQQKYESDVPENIIDFFVAQVQATDMD-SESSVTYTIRQGDAEKFRIDPQS 896
Query: 153 GDIRTNKALDYEKQQLYL 170
G +RT ++LDYE+Q Y+
Sbjct: 897 GIVRTRRSLDYERQAQYV 914
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ--DGLAVGRVHATDADEGQNAVVYY 138
G V +R++D+NDK P F + Y ++PE G+ + + A DAD G NA+V Y
Sbjct: 124 GRRRNIPVIVRISDVNDKAPVFLNSSYSVTIPEDLPVGGIVIRDIEAKDADAGINALVEY 183
Query: 139 SV 140
V
Sbjct: 184 KV 185
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYS 139
G +S ++IR+ D+ND P F S F + G V +V A D D N + Y+
Sbjct: 521 GATTSPIAISIRLLDVNDNAPRFPSFKPVF-LQAGDSKKVVTQVQAEDKDWADNGRIEYA 579
Query: 140 VPEDI-----PFVVDANTGDIRTNKALDY-EKQQLYLE 171
V + FV++ TG I + AL EK L L+
Sbjct: 580 VVDVTNNGKNKFVINPQTGVIDSAGALKPGEKYTLTLQ 617
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 21/157 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQ------------ 77
+ QV+A DKD G +EY ++D + + F ++P T + G ++
Sbjct: 560 VTQVQAEDKDWADNGRIEYAVVDVTNNGKNKFVINPQTGVIDSAGALKPGEKYTLTLQAT 619
Query: 78 DEGGLSSTATVN-IRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVV 136
D GG SS + I + N + P F YE SV EG ++ V+ A + +N V
Sbjct: 620 DGGGKSSLGLLEVIIIPGPNIQAPVFTKDSYEISVDEGSPVNSL--VYTFKARDQENDRV 677
Query: 137 YYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
YS+ E F ++ + G + K +D E+ Y+
Sbjct: 678 TYSIVAGNELGHFKMEKSNGSLLLAKPIDREQLSRYV 714
>gi|357623109|gb|EHJ74393.1| cadherin [Danaus plexippus]
Length = 2755
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 89/173 (51%), Gaps = 21/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + + +++V+A DKD+G + YR++ N +F + P+T
Sbjct: 399 YTANVLESDAVKTKILEVQAIDKDTGNNARITYRVVSENNTNEEHFKVQPSTGWVYLAKA 458
Query: 71 -------EHQGPI--QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
+H+ I D G LS+TA++ + V D ND +P F YEF V E Q G
Sbjct: 459 LDRESIAKHKMTIIATDNGIPPLSTTASLIVNVVDANDNDPAFSQASYEFLVEENQKVGA 518
Query: 119 AVGRVHATDADEGQNAVVYYSV-PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
VG++ ATDAD G NAV+ YS+ P + FVV+ +TG I + LD E + YL
Sbjct: 519 FVGKISATDADIGDNAVIKYSLFPSNTSFVVNPSTGVITAKEVLDREYKNTYL 571
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 88/176 (50%), Gaps = 37/176 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + + ++G + ++ ATD D G +++Y L +NT F ++P+T
Sbjct: 506 YEFLVEENQKVGAFVGKISATDADIGDNAVIKYSLFPSNTS----FVVNPSTGVITAKEV 561
Query: 71 ---EHQ------GPIQDEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
E++ +D+G L S V I+VTD+ND +PE + +D ++
Sbjct: 562 LDREYKNTYLLFAEARDQGTLPKSVRVPVTIKVTDVNDNSPEI--------IDPREDVVS 613
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
V RV A D D G NA V YS+ + FV+D+NTG I+T+ LD+E++ +Y
Sbjct: 614 VSRVKAIDRDNGINASVLYSILNERDMDGFGVFVIDSNTGVIKTSTVLDHEERSIY 669
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 76/172 (44%), Gaps = 25/172 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y A + + G ++Q+ A D D G + Y ++D N D A F ++PA
Sbjct: 1574 YIANVLEGNTKGEFVVQLSAKDGDRGANARILYHIVDGNHDNA--FIIEPAFSSSVKTNI 1631
Query: 78 -----------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
DEG ++ TAT+ I V DIND P F P SV EG + G
Sbjct: 1632 VLDREIRETYKLTVIATDEGNPQMTGTATLRINVVDINDNQPTFPP-PNVISVSEGTEVG 1690
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ V A D D A+ Y V D F +D +G I N+ LDYE +++Y
Sbjct: 1691 SVLTSVTANDVDT-YPALKYAIVDGDNTFSIDRYSGKIVLNRPLDYENKKVY 1741
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 70/165 (42%), Gaps = 27/165 (16%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRL------LDNNTDAASYFNLDPAT-------- 70
+ +G ++ +ATD D GK+G++ Y + + N D+ F +DP T
Sbjct: 2100 ENERVGTSVFTARATDLDKGKYGILNYSIEPMSSNYNRNDDSWKMFQIDPVTGLVNTNAV 2159
Query: 71 ---------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD---GL 118
E D GG SS+ V I V ++ P+F Y F VP+ G
Sbjct: 2160 FDYEQKNKYEFSIKASDLGGKSSSVKVRIDVESHDEFYPQFTQKTYNFGVPKSGSLPAGY 2219
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALD 162
+G+ ATD D+G + + Y + F ++ TG I K +D
Sbjct: 2220 IIGQATATDKDKGIDGRIVYQLSTSHSYFKINRTTGVIILKKKVD 2264
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 76/163 (46%), Gaps = 26/163 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPI----- 76
++ V A D DSG+FG V YR+++ N + F +D +T + G
Sbjct: 101 IVAVTADDADSGRFGTVTYRIVNGNDN--DVFRIDRSTGEIFITKPSLIQASGKFDLEIS 158
Query: 77 -QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQ 132
D GGL++ ATV++ V + F Y F V E + G VG + AT G+
Sbjct: 159 ATDGGGLAAPQGATVHVNVIPAGVGSALFDKPRYNFRVREDVRSGTIVGNLKATAG--GK 216
Query: 133 NAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
V Y + DI F ++ +TG IRT+K+LD E YL V
Sbjct: 217 QLVRYSIISGDIDNHFTIETHTGAIRTSKSLDRETTSSYLLNV 259
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 86 ATVNIRVTDINDKNPEFQ-SLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
ATV++ V D+ND +P F+ Y +VPE + + V ATD D G N V+ YS+
Sbjct: 1129 ATVSVNVLDVNDNSPTFKIGSCYTLTVPENNEPEVIHTVTATDKDIGANGVITYSISSGN 1188
Query: 143 -DIPFVVDANTGDIRTNKALDYEKQQLY 169
F +DA TG + T K LD E Q Y
Sbjct: 1189 NGNKFTIDATTGKL-TAKTLDRETQAKY 1215
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 29/161 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA----TEHQGPIQDEGGL--- 82
G +L++V ATD D G + Y LLD +++ F ++P T Q + G L
Sbjct: 1371 GQSLLRVSATDNDIGINAEILYELLDTSSNK---FRINPTTGILTATQSLASENGKLIHL 1427
Query: 83 ------------SSTATVNIRVTDINDKNPE--FQSLPYEFSVPEGQD-GLAVGRVHATD 127
SS + IRV D ND+NP FQ+ Y ++ EG G + +V A
Sbjct: 1428 KVMAKDKGSPPQSSVGLIEIRVGDYNDQNPSLTFQNNTYNITLEEGSAYGKEILQVTALR 1487
Query: 128 ADEGQNAVVYY--SVPEDIPFVVDANTGDIRTNKA--LDYE 164
+D + ++Y + + F +D+NTG IR N + LDYE
Sbjct: 1488 SDGRRQRIIYEFGNGNDQYEFEIDSNTGVIRVNNSANLDYE 1528
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
T+ I++TDIND P F + Y +PEG L +G V A D D +N + YS+ + P
Sbjct: 1757 TLTIKITDINDNTPVFDDITYNRVLPEGSGILEIGCVSAKDIDSEENGKITYSILDPSPG 1816
Query: 146 FVVDANTGDIRTN 158
+ +DA TG + N
Sbjct: 1817 YYIDAETGVLFVN 1829
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 69/163 (42%), Gaps = 32/163 (19%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------------- 70
+ V ATDKD G G++ Y + N + F +D T
Sbjct: 1164 IHTVTATDKDIGANGVITYSISSGNN--GNKFTIDATTGKLTAKTLDRETQAKYDLTIVA 1221
Query: 71 -EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDA 128
+H P+ +G + T + V D ND +P F + Y ++PE ++ +V ATDA
Sbjct: 1222 YDHGSPVALQGACNLT----VMVEDQNDNDPVFDTGHYSATIPEDASIDTSIIKVRATDA 1277
Query: 129 DEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
D G N + YS+ + F +D +G I T D EK +Y
Sbjct: 1278 DLGFNKRIVYSLANESQGLFRIDNKSGVIYTTGYFDREKTSIY 1320
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 71/161 (44%), Gaps = 24/161 (14%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--------------FNLDPATEHQ 73
++G + +ATD+D GK G+V Y+L+ A ++ + + H
Sbjct: 302 QIGSIVYAARATDEDEGKNGMVTYQLVSATGPANTFAVNSQHGLVTLLRLLDYENLVRHT 361
Query: 74 GPI--QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
I QD G LS+ T+ + V DIND +P F+ Y +V E + V A D
Sbjct: 362 VIISAQDSGNPQLSANLTLVVDVQDINDNSPVFEHDTYTANVLESDAVKTKILEVQAIDK 421
Query: 129 DEGQNAVVYYSV-----PEDIPFVVDANTGDIRTNKALDYE 164
D G NA + Y V + F V +TG + KALD E
Sbjct: 422 DTGNNARITYRVVSENNTNEEHFKVQPSTGWVYLAKALDRE 462
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ--DGLAVGRVHATDADEGQNAV 135
D GGLS+TA V I++ DIND P F Y S+ EG+ + V A DAD G+
Sbjct: 57 DRGGLSTTAMVKIQLLDINDNVPAFTVKDYNVSLKEGRISSNEPIVAVTADDADSGRFGT 116
Query: 136 VYYSV---PEDIPFVVDANTGDIRTNK 159
V Y + ++ F +D +TG+I K
Sbjct: 117 VTYRIVNGNDNDVFRIDRSTGEIFITK 143
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 78/191 (40%), Gaps = 39/191 (20%)
Query: 1 MTPCPIPSALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA 60
+ P + SAL D Y R+ G + +KAT +G LV Y ++ + D
Sbjct: 177 VIPAGVGSAL---FDKPRYNFRVREDVRSGTIVGNLKAT---AGGKQLVRYSIISGDID- 229
Query: 61 ASYFNLDPATEHQGPIQDEGGLSSTAT---------------------VNIRVTDINDKN 99
++F ++ H G I+ L T V I + D+ND
Sbjct: 230 -NHFTIE---THTGAIRTSKSLDRETTSSYLLNVRAATGNPPSYDQTQVQITLEDVNDNV 285
Query: 100 PEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV-----PEDIPFVVDANTG 153
PEF + SV E Q G V ATD DEG+N +V Y + P + F V++ G
Sbjct: 286 PEFGTSSVRVSVAESAQIGSIVYAARATDEDEGKNGMVTYQLVSATGPANT-FAVNSQHG 344
Query: 154 DIRTNKALDYE 164
+ + LDYE
Sbjct: 345 LVTLLRLLDYE 355
Score = 42.7 bits (99), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 77/183 (42%), Gaps = 26/183 (14%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDA---AS 62
D+ Y A + + ++++V+ATD D G + Y L +DN +
Sbjct: 1251 DTGHYSATIPEDASIDTSIIKVRATDADLGFNKRIVYSLANESQGLFRIDNKSGVIYTTG 1310
Query: 63 YFNLDPAT--EHQGPIQDEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFSV----PE 113
YF+ + + + D+G S +V + + D+ND P F P+ + P
Sbjct: 1311 YFDREKTSIYHFEAVATDQGRYIARSQRVSVEVIINDVNDNKPIFTKYPFREQMATLTPP 1370
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
GQ L RV ATD D G NA + Y + F ++ TG + ++L E +L
Sbjct: 1371 GQSLL---RVSATDNDIGINAEILYELLDTSSNKFRINPTTGILTATQSLASENGKLIHL 1427
Query: 172 RVF 174
+V
Sbjct: 1428 KVM 1430
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
SS + I + D+ND PE+ P + E + G + A DAD G N + + +
Sbjct: 801 SSAVAIRIEIVDVNDNAPEWHEDPINIDISEITNIGSTIYNFSAKDADSGSNGELNFYII 860
Query: 142 EDIP-----FVVDANTGDIRTNKALDYEKQQLYL 170
P F +D+ TG + N LD+E + Y
Sbjct: 861 SSQPVSNNVFNLDSLTGTLTLNSHLDFEILKEYW 894
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 79/192 (41%), Gaps = 34/192 (17%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT---------EHQ- 73
D E V++ +VKA D+D+G V Y +L+ + D F +D T +H+
Sbjct: 606 DPREDVVSVSRVKAIDRDNGINASVLYSILNERDMDGFGVFVIDSNTGVIKTSTVLDHEE 665
Query: 74 ------GPIQDEGGLSSTATV---NIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+GG TV + V D+ND P F S F V E + G VG+V
Sbjct: 666 RSIYRLTVAATDGGNPPRQTVRQLKVEVLDLNDNRPTFTSSSLTFKVREDAEVGHVVGKV 725
Query: 124 HATDADEGQN--------AVVYYSVP---EDIP--FVVDANTGDIRTNKALDYEKQQLYL 170
D+D N + Y +P + +P F +D TG + + LD E Q Y
Sbjct: 726 VCCDSDINDNIISNDEEKQISYLLMPLTSDHLPGTFEIDRRTGSLVVARKLDREIQDEYR 785
Query: 171 ERVFLISKFATS 182
V + AT+
Sbjct: 786 LEVRALDTSATN 797
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 14/95 (14%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
+ +++ D ND P F Y ++ E + G +V ATD D+G+ ++ YS+ E +
Sbjct: 2075 IKVQILDENDNTPTFPVSEYFETIGENERVGTSVFTARATDLDKGKYGILNYSI-EPMSS 2133
Query: 146 -----------FVVDANTGDIRTNKALDYEKQQLY 169
F +D TG + TN DYE++ Y
Sbjct: 2134 NYNRNDDSWKMFQIDPVTGLVNTNAVFDYEQKNKY 2168
Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 8/123 (6%)
Query: 48 LVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPY 107
LV LD T + L A +G I S+ T+ + VTD ND P F + +
Sbjct: 1929 LVLVNRLDRETQDSYIIGL--AAVEKGKIMSYSQNKSSITIYVTVTDANDNAPVFSTSDF 1986
Query: 108 EFSVPEG-QDGLAVGRVHATDAD--EGQNAVVYYSVP---EDIPFVVDANTGDIRTNKAL 161
+ SV E + G + ++ DAD N+ V +++ ++ F + TG + NK+L
Sbjct: 1987 DLSVSEDVKIGHTLTQLTINDADLYGTPNSAVVFNITSGDDNNLFYIHPTTGSLTVNKSL 2046
Query: 162 DYE 164
DY+
Sbjct: 2047 DYD 2049
>gi|432104659|gb|ELK31271.1| Cadherin-6 [Myotis davidii]
Length = 790
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 92/184 (50%), Gaps = 29/184 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLL----------DNNTDAASYFN 65
Y A + ++G ++QV ATD D +G V Y +L + + FN
Sbjct: 164 YTATVPEMSDVGTVVVQVTATDADDPTYGNSAKVVYSILQGQPYFSVESETGIIKTALFN 223
Query: 66 LDPAT--EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-D 116
+D ++Q IQ + GGLS T TVNI +TD+ND P F Y+F+ PE
Sbjct: 224 MDRENKEQYQVVIQAKDMAGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFTTPESSPP 283
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
G ++GR+ ATDAD G+NA + YS+ E D+ D G I K LD+EK+++Y
Sbjct: 284 GTSIGRIKATDADVGENAAIQYSITEGEGLDMFDVITDQDTQEGIITVKKLLDFEKKKVY 343
Query: 170 LERV 173
+V
Sbjct: 344 TLKV 347
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPIFTKEVYTATVPEMSDVGTVVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTNK-ALDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 207 YFSVESETGIIKTALFNMDRENKEQY 232
Score = 42.4 bits (98), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 72/174 (41%), Gaps = 47/174 (27%)
Query: 30 GVTLMQVKATDKDSGKFGLVEY---------------------------RLLDNNTDA-- 60
G ++ ++KATD D G+ ++Y +LLD
Sbjct: 284 GTSIGRIKATDADVGENAAIQYSITEGEGLDMFDVITDQDTQEGIITVKKLLDFEKKKVY 343
Query: 61 -----ASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-G 114
AS +++P + GP +D +ATV I V D+ D+ P F L Y + E
Sbjct: 344 TLKVEASNPHVEPRFLYLGPFKD------SATVRIMVEDV-DEPPVFSKLAYTLQIREDA 396
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYE 164
Q A+G V A D D +N V YSV D F + + G + T+K LD E
Sbjct: 397 QINTAIGSVTAQDPDAARNP-VRYSVDRHTDLDRIFNIHSGNGSVFTSKLLDRE 449
>gi|326917617|ref|XP_003205093.1| PREDICTED: cadherin-9-like [Meleagris gallopavo]
Length = 641
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 85/178 (47%), Gaps = 37/178 (20%)
Query: 29 LGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT--------------- 70
LG +++QV ATD D +G V Y +L YF++DP T
Sbjct: 26 LGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPETGIIKTALPDMSRENR 81
Query: 71 -EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
++Q IQ + GGLS T TVNI +TD+ND P F Y+FS PE G +GR
Sbjct: 82 EQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFSSPESAPPGTPLGR 141
Query: 123 VHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ A D D G+NA + YS+ DI D G I K LD+EK+ LY RV
Sbjct: 142 IKANDPDLGENAEIEYSISNGDGSDVFDIVTDKDTQEGIITVKKQLDFEKKILYTLRV 199
Score = 36.2 bits (82), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 13/114 (11%)
Query: 61 ASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLA 119
A+ +LDP GP +D TA V I V DI D+ P F Y V E ++G
Sbjct: 201 ATNTHLDPRFLQLGPFKD------TALVKISVEDI-DEPPVFSRSSYLIEVDEDAKEGSI 253
Query: 120 VGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+G+V A D D +N + YSV D F + + G + +K LD E++ +
Sbjct: 254 IGQVVAQDPDITKN-TIKYSVDRHTDLDRIFNIYSGNGSLFISKPLDREEEPWH 306
>gi|350414007|ref|XP_003490178.1| PREDICTED: protocadherin-like wing polarity protein stan-like
[Bombus impatiens]
Length = 3163
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 90/179 (50%), Gaps = 28/179 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G T++ V ATD D GK + Y L + ++AS F ++P T G I
Sbjct: 819 IGTTVLVVSATDSDVGKNAQITYSLGTDGGESASEFTINPQT---GAITTTRTLDRELVP 875
Query: 79 ---------EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHA 125
+GG LS T V I VTD+ND P F+S Y+ S+PE G +V RV A
Sbjct: 876 GYFLTVTARDGGVPPLSDTINVEISVTDVNDNAPVFESPQYQGSIPEDVAGGTSVLRVSA 935
Query: 126 TDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATS 182
TDAD N V Y++ + D F +D++TG IRT K LD E +Y+ + + + + S
Sbjct: 936 TDADTDLNGRVRYALEDDGDGAFAIDSSTGVIRTAKPLDRESVAMYILKAVAMDRGSPS 994
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 84/184 (45%), Gaps = 35/184 (19%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPAT--- 70
A R+ +G T++ VKATD+D+G+ VEY +L N D A F +DP T
Sbjct: 373 ASIREGVPVGSTVVTVKATDQDTGRNAEVEYSILSTTSGSGVANADDALTFRIDPRTGVV 432
Query: 71 EHQGPIQDE-------------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
+ P+ E S+ AT+ +RV D ND P+F Y +
Sbjct: 433 TTRTPLDREKTEVYTVILSVSDQATPPSARKSANATLVVRVLDDNDNYPQFTERTYSAWI 492
Query: 112 PEGQDGLA---VGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEK 165
PE D A + R+ ATDAD G NA V Y++ F +D+ GD+ K LDYE
Sbjct: 493 PEDLDYTANPVIARIRATDADSGNNAAVRYAIIGGNTQNTFSIDSMIGDVALVKPLDYES 552
Query: 166 QQLY 169
+ Y
Sbjct: 553 TRSY 556
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 75/164 (45%), Gaps = 27/164 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPI----Q 77
+ +++ATD DSG V Y ++ NT D A LD + I Q
Sbjct: 504 IARIRATDADSGNNAAVRYAIIGGNTQNTFSIDSMIGDVALVKPLDYESTRSYKIVIRAQ 563
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNA 134
D G S+T + + V D+ND P F + ++ SV E G ++ R+ A DADEG NA
Sbjct: 564 DGGSPARSNTTQLLVHVGDVNDNAPRFYTSHFQESVSENVPIGYSMLRIQAYDADEGANA 623
Query: 135 VVYYSV---------PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ Y++ E+ P V+ TG I T K LD E+ Y
Sbjct: 624 QIKYTIGARDFSGASTENFPITVNTETGWIYTTKQLDREQCSRY 667
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 77/171 (45%), Gaps = 30/171 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQDEG------ 80
G ++++V ATD D+ G V Y L D+ A F +D +T P+ E
Sbjct: 927 GTSVLRVSATDADTDLNGRVRYALEDDGDGA---FAIDSSTGVIRTAKPLDRESVAMYIL 983
Query: 81 ----------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
LS+ V I++ D+ND P F++ + E G VG ++A D D
Sbjct: 984 KAVAMDRGSPSLSTVVPVTIKIQDVNDSPPAFENDKIVLYIAENSPIGSTVGEIYAHDPD 1043
Query: 130 EGQNAVVYYSV---PEDIPFVVDANTG----DIRTNKALDYEKQQLYLERV 173
EG NAVV YSV + F ++ +G ++ T + LDYE + E V
Sbjct: 1044 EGPNAVVQYSVIGGEDSNSFALNVRSGADRAELITLEELDYESPKKKFELV 1094
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG + TA V + V+D N+ P F++ PY S+ E G V V ATD+D G+NA +
Sbjct: 780 DSGGRTDTALVYVNVSDANNFEPVFENTPYAVSLFEDAPIGTTVLVVSATDSDVGKNAQI 839
Query: 137 YYSVPED-----IPFVVDANTGDIRTNKALDYE 164
YS+ D F ++ TG I T + LD E
Sbjct: 840 TYSLGTDGGESASEFTINPQTGAITTTRTLDRE 872
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 74/187 (39%), Gaps = 40/187 (21%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
Y A+ ++ E G + V+A D + G LLD + A LDP T G +
Sbjct: 265 LYVAVVEEEKEPGAYVTSVRARDPEGGTVRYSMSSLLDARSQA--LLVLDPVT---GRVT 319
Query: 78 DEGGL----------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
L + T T+ + V D ND P F+ E S+ EG
Sbjct: 320 TRARLDRESVDVHYFRVLAVDDSFPPRTGTTTLQVNVLDTNDHAPTFEWPEDEASIREGV 379
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSV------------PEDIPFVVDANTGDIRTNKALD 162
G V V ATD D G+NA V YS+ + + F +D TG + T LD
Sbjct: 380 PVGSTVVTVKATDQDTGRNAEVEYSILSTTSGSGVANADDALTFRIDPRTGVVTTRTPLD 439
Query: 163 YEKQQLY 169
EK ++Y
Sbjct: 440 REKTEVY 446
Score = 38.9 bits (89), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 31/171 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL-------------------DPA 69
+G ++++++A D D G ++Y + + AS N +
Sbjct: 605 IGYSMLRIQAYDADEGANAQIKYTIGARDFSGASTENFPITVNTETGWIYTTKQLDREQC 664
Query: 70 TEHQGPI--QDEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVH 124
+ +Q + D G + S++ATV + VTD+ND +P F YE V E G V V
Sbjct: 665 SRYQFTVIAADSGEVPKSASATVILTVTDVNDNDPYFDPKNYEAVVSEDDPPGTPVTSVT 724
Query: 125 ATDADEGQNAVVYYSVPED-----IPFVVDANTGDIRTNKALDYEKQQLYL 170
ATD DE +A ++Y + G I + LDY++++ ++
Sbjct: 725 ATDPDE--DARIHYEITAGNTRGRFSIASQNGRGLITVAQPLDYKQEKRFV 773
>gi|363730466|ref|XP_001231541.2| PREDICTED: cadherin-9 isoform 2 [Gallus gallus]
Length = 789
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 87/189 (46%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + +G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 163 LYAASIPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPETGIIK 218
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
++Q IQ + GGLS T TVNI +TD+ND P F Y+FS P
Sbjct: 219 TALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFSSP 278
Query: 113 EGQ-DGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYE 164
E G +GR+ A D D G+NA YS+ DI D G I K LD+E
Sbjct: 279 ESAPPGTPLGRIKANDPDLGENAETEYSISNGDGSDMFDIVTDKDTQEGIITVKKQLDFE 338
Query: 165 KQQLYLERV 173
K+ LY RV
Sbjct: 339 KKILYTLRV 347
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y S+PE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPKFTKDLYAASIPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRT 157
F VD TG I+T
Sbjct: 207 YFSVDPETGIIKT 219
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G + Y + F++D NTGDI K LD E++ LY+
Sbjct: 68 GPDTQYVGKLH-TDQDKGDGNLKYILTGDGAGSLFIIDENTGDIHAAKKLDREEKSLYVL 126
Query: 172 RVFLISK 178
R I +
Sbjct: 127 RAKAIDR 133
Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 13/110 (11%)
Query: 61 ASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLA 119
A+ +LDP GP +D TA V I V DI D+ P F Y V E ++G
Sbjct: 349 ATNTHLDPRFLQLGPFKD------TALVKISVEDI-DEPPVFSRSSYLIEVDEDAKEGSI 401
Query: 120 VGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEK 165
+G+V A D D +N + YSV D F + + G + +K LD E+
Sbjct: 402 IGQVVAQDPDITKN-TIKYSVDRHTDLDRIFNIYSGNGSLFISKPLDREE 450
>gi|348555722|ref|XP_003463672.1| PREDICTED: cadherin-9 [Cavia porcellus]
Length = 789
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 90/189 (47%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + +G +++QV ATD D +G V Y +L YF++DP +
Sbjct: 163 LYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGVIK 218
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
++Q IQ + GGLS T TVNI +TD+N+ P F Y F+ P
Sbjct: 219 TALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYHFNSP 278
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPE----DIPFVV---DANTGDIRTNKALDYE 164
E G +GR+ A+D D G NA V YS+ E DI VV D G I K LD+E
Sbjct: 279 ESVPPGTHLGRIKASDPDMGTNAEVQYSIAEGDGADIFEVVTDKDTQEGIITVKKNLDFE 338
Query: 165 KQQLYLERV 173
K+ LY RV
Sbjct: 339 KKMLYTLRV 347
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 54/114 (47%), Gaps = 13/114 (11%)
Query: 61 ASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
AS +LDP H GP +D TA V I V DI D+ P F L Y V E ++G
Sbjct: 349 ASNTHLDPRFLHLGPFKD------TAVVKISVEDI-DEPPVFSKLSYLIEVDEDVKEGSI 401
Query: 120 VGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+G+V A D D N +V YSV D F + + G I T K LD E +
Sbjct: 402 IGQVTAYDPD-AMNNLVKYSVDRHTDMDRIFSIHSENGSIFTLKPLDRESSPWH 454
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPKFTKDLYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRT 157
F VD +G I+T
Sbjct: 207 YFSVDPESGVIKT 219
Score = 39.3 bits (90), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G + Y + FV+D TGDI K LD E++ LY+
Sbjct: 68 GADTQYVGKLH-TDQDKGDGNLKYILTGDGAGSLFVIDEKTGDIHAAKKLDREEKSLYIL 126
Query: 172 RVFLISK 178
R I +
Sbjct: 127 RAKAIDR 133
>gi|165292262|dbj|BAF98841.1| cadherin-9 [Lonchura striata domestica]
Length = 242
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 87/189 (46%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + +G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 2 LYAASIPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPETGIIK 57
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
++Q IQ + GGLS T TVNI +TD+ND P F Y+FS P
Sbjct: 58 TALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSSYQFSSP 117
Query: 113 E-GQDGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYE 164
E G +GR+ A D D G+NA + YS+ DI D G I K LD+E
Sbjct: 118 ESAPPGTPLGRIKANDPDVGENAEIEYSISNGDGSDMFDIITDKDTQEGIITVKKHLDFE 177
Query: 165 KQQLYLERV 173
+ LY +V
Sbjct: 178 NKVLYTLKV 186
>gi|115666275|ref|XP_785445.2| PREDICTED: protein dachsous-like [Strongylocentrotus purpuratus]
Length = 3342
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 86/169 (50%), Gaps = 25/169 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ 77
+G ++ + ATD+DSG+ G V Y + N D F+LD T EH+ +
Sbjct: 1566 VGFNVIHIIATDEDSGENGRVGYTITSGNEDGK--FSLDAVTGLLTIAHSLDHEHKRDYE 1623
Query: 78 ------DEGGLS--STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
D G + +T T+ IRV D+ND+ P F+ Y +V E Q G VG V A D
Sbjct: 1624 LVILATDHGTVQRMATQTLTIRVIDVNDQPPRFEQSIYVMNVSESQAPGTYVGMVVAIDG 1683
Query: 129 DEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERVF 174
D G N + Y +PE+I F ++A TG+IRT LD E++ Y+ V+
Sbjct: 1684 DSGVNGRITYELPEEIARGMFRINATTGEIRTKAILDREQRDSYVVTVY 1732
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 78/175 (44%), Gaps = 25/175 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + E G + QV ATD D G + YR+ TD + +F ++P +
Sbjct: 509 LYHATIIEASEPGTPVKQVHATDADEGVNAQIIYRISPEGTDYSDWFEINPMSGLVTTLQ 568
Query: 71 ----EHQGPI------QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E G + DEG LSS+ +NI +TD+ND P F Y S+ E Q+
Sbjct: 569 KVDREETGSVFLTVIASDEGEISLSSSVIINITITDVNDNQPVFFPGSYNASILEEQEIP 628
Query: 118 LAVGRVHATDADEGQNAVVYYS-----VPEDIPFVVDANTGDIRTNKALDYEKQQ 167
+V+ATD DEG V YS VP F ++ TGD+ LD + Q
Sbjct: 629 YCFLQVNATDPDEGSAGQVTYSPSTDLVPTPSQFSINPLTGDLCVISRLDRDAGQ 683
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 20/170 (11%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT----- 70
LFY + + + + A D D+G++G + Y + ++ YF +DP T
Sbjct: 2707 LFYHFLVPENMPVETYVFTAGALDNDAGEYGELTYSIRGLGPSNGDDYFTIDPVTGEVFT 2766
Query: 71 ----EHQGP--------IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+++ QD GGLS + + +T +++ P F Y F + +G D G
Sbjct: 2767 AAVFDYESANSYRFVVQAQDTGGLSISIQTEVNITSVDEFPPMFNDQEYYFEIGDGADAG 2826
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQ 167
VG+V ATDAD G++ VV YS+ + F ++A TG I+ K L+ ++
Sbjct: 2827 DYVGQVTATDADGGEDGVVIYSLTHEF-FYIEATTGIIKVAKPLNSSARK 2875
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 18/169 (10%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN----TDAASYFNLDPATEHQG 74
Y A R++ G + + ATD DSG G + Y L+D++ D++ + A + +
Sbjct: 1243 YQASVREEQPAGEFVAWIIATDTDSGVLGNISYSLIDSSPKFIIDSSGVISTAAAIDRED 1302
Query: 75 P-------IQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRV 123
+ +GG + +TA+V +R+ D+ND P Y F+ E Q VG V
Sbjct: 1303 ESYYTLTVLAQDGGNPPMQATASVRVRILDLNDNVPIAAMSAYIFTADENIQPPTVVGVV 1362
Query: 124 HATDADEGQNAVVYYSVPEDIPF-VVDAN--TGDIRTNKALDYEKQQLY 169
A+D D G N +YY + E F V D N +G++ + +DYE Y
Sbjct: 1363 SASDMDVGDNGKIYYYITEGNDFDVWDVNHSSGEVYNVRVVDYEMAAHY 1411
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 74/161 (45%), Gaps = 29/161 (18%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD----------------- 78
V ATD D G G+ YR++ N D + F+LD G D
Sbjct: 199 VTATDADEGINGIQGYRIVGGNID--NTFDLDVRVRETGVYMDIVVNKTLDRETISMYTL 256
Query: 79 -----EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
+GG L++ TVNI+VTD+ND +P F + ++ E V +V A+D D
Sbjct: 257 IIEAYDGGDPRLTANTTVNIKVTDVNDNSPVFTLTSFTATINESAPVNTTVLQVTASDED 316
Query: 130 EGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEKQQLY 169
EG N V +++ D F +D +G + NK L+YE Q +
Sbjct: 317 EGLNGEVVFNLQRDDGFFRIDPASGIVYLNKVLNYEDAQAH 357
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG-LAVGRVHATDADEGQNAVVYYSVPE-- 142
ATV + +TD ND P+F Y+ V E + + V +V ATDADEG N +YY V
Sbjct: 2167 ATVQVELTDANDNAPQFVQDRYQSRVWEVPNSDIYVTQVSATDADEGTNGAIYYEVTSGN 2226
Query: 143 -DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
D F +D TG + T K+LDYE + Y+ V
Sbjct: 2227 TDNAFAIDHVTGIVTTAKSLDYEIEDSYVLTV 2258
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 71/177 (40%), Gaps = 33/177 (18%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------- 68
FY + + ++QV+ATD D G L+ Y L NN + YF + P
Sbjct: 1035 FYPVSILENLPISTPVVQVEATDNDRGANALITYTLTPNND--SPYFAVFPREGWLYTRQ 1092
Query: 69 ---------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
A++ P Q+ S+ATV + V D ND P F Y F + E
Sbjct: 1093 VLDRELKSTFTLTIMASDSGSPPQN-----SSATVQVTVVDANDNAPHFTKKSYHFHINE 1147
Query: 114 G-QDGLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G V RV A D D G N V Y++ F +D G IRT LD E Y
Sbjct: 1148 NLPAGTEVDRVEAVDPDLGPNGQVTYTLSPSGDFTIDEE-GVIRTTHPLDREAAYSY 1203
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
S T T+ + VTD+ND +P F S+ Y S+PE + V ATD DEG N VYY++
Sbjct: 1846 SGTTTIRVTVTDLNDNDPVFGSMSYYKSIPESTAINATILTVVATDDDEGLNGDVYYTLD 1905
Query: 142 EDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
F +D G+I T DYEK+ Y +V
Sbjct: 1906 NTTIGLFSIDPEHGEITTTGKFDYEKETRYTFQV 1939
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 76/174 (43%), Gaps = 30/174 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD-------------- 78
L V ATD DSG GL+ Y +L +F +D T IQ+
Sbjct: 1465 LWTVSATDADSGANGLIRYTILTEQ----DFFAVDEYTGTLRTIQNVDHEINHVFLLVIQ 1520
Query: 79 --------EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADE 130
++T+TV +R+ D ND NP F S + + G V + ATD D
Sbjct: 1521 AQDQAINVSARRAATSTVEVRIYDSNDNNPVFVSRSSTDVMEDEPVGFNVIHIIATDEDS 1580
Query: 131 GQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFAT 181
G+N V Y++ ED F +DA TG + +LD+E ++ Y E V L + T
Sbjct: 1581 GENGRVGYTITSGNEDGKFSLDAVTGLLTIAHSLDHEHKRDY-ELVILATDHGT 1633
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP 145
ATV + V D+ND NP F ++ ++PE Q + ATDADEG N + YS+ P
Sbjct: 1745 ATVLVYVMDVNDNNPTFAPPTFDITLPENQSPGVIHNAIATDADEGPNGDLIYSITGGDP 1804
Query: 146 ---FVVDANTGDIRTNKALDYEKQQLY 169
F ++ +TG I T ALD E + Y
Sbjct: 1805 KNAFSINQSTGAIFTVGALDREDEATY 1831
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 22/178 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A ++ E+ +QV ATD D G G V Y + S F+++P T
Sbjct: 617 YNASILEEQEIPYCFLQVNATDPDEGSAGQVTYSPSTDLVPTPSQFSINPLTGDLCVISR 676
Query: 71 --------EHQGPIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLA 119
E+ ++ D GGL S A V + + DIND P F SL Y + + G
Sbjct: 677 LDRDAGQEEYNFAVKATDGGGLMSHAFVRVILEDINDNVPVFTSLNYRGHIEYDAALGTE 736
Query: 120 VGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
V V A D D + V Y++ D F ++ TG I +LD+ + +Y V
Sbjct: 737 VKLVVAEDRDAREFGRVTYTIDSSTNDGTFAINQTTGLITLVGSLDWVQHPVYTLEVI 794
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 72/162 (44%), Gaps = 27/162 (16%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------EHQGPIQD----- 78
+ + QV ATD D G G + Y + NTD A F +D T I+D
Sbjct: 2200 IYVTQVSATDADEGTNGAIYYEVTSGNTDNA--FAIDHVTGIVTTAKSLDYEIEDSYVLT 2257
Query: 79 ----EGG---LSSTATVNIRVTDINDKNPEFQSL-PYEFSVPEGQDGLAVGRVHATDADE 130
+GG L+ TAT+ I + D+ND P F + P S G GL+V V ATD+D
Sbjct: 2258 VVARDGGSPQLTGTATMRIGIVDVNDNQPVFVQMDPVSVSEDLGV-GLSVTTVTATDSDT 2316
Query: 131 GQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
N + Y P F +D +G I ++LD E Q Y
Sbjct: 2317 NPN-IQYSFTSTGNPGGYFAIDQYSGIITLARSLDRETQDGY 2357
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 74/167 (44%), Gaps = 29/167 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-------------------LDNNTDAASYFNLDPAT 70
G + +V+A D D G G V Y L LD A SY + A
Sbjct: 1152 GTEVDRVEAVDPDLGPNGQVTYTLSPSGDFTIDEEGVIRTTHPLDREA-AYSYRLIIRAV 1210
Query: 71 EHQGPIQDEGGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQ-DGLAVGRVHATDA 128
+ P LSS+ATV I V D+ND P F Q Y+ SV E Q G V + ATD
Sbjct: 1211 DGGNP-----ALSSSATVYINVNDLNDNAPVFSQDRTYQASVREEQPAGEFVAWIIATDT 1265
Query: 129 DEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLERVF 174
D G + YS+ + P F++D+ +G I T A+D E + Y V
Sbjct: 1266 DSGVLGNISYSLIDSSPKFIIDS-SGVISTAAAIDREDESYYTLTVL 1311
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 11/113 (9%)
Query: 59 DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ ASY AT+H P Q + + I VTD+ND P F Y ++ E + G
Sbjct: 467 EVASYDISIRATDHGSPPQ-----HAEENLTIAVTDVNDNPPIFDLPLYHATIIEASEPG 521
Query: 118 LAVGRVHATDADEGQNAVVYYSV-PEDIP----FVVDANTGDIRTNKALDYEK 165
V +VHATDADEG NA + Y + PE F ++ +G + T + +D E+
Sbjct: 522 TPVKQVHATDADEGVNAQIIYRISPEGTDYSDWFEINPMSGLVTTLQKVDREE 574
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 20/161 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDN----------------NTDAASYFNLDPATEH 72
+G ++ A D DSG GLV YRL N N + + L +
Sbjct: 942 IGSSIYVATAMDLDSGDNGLVRYRLTSNPGNTFRIVEATGEIILNKEVSYNDQLSFEVDI 1001
Query: 73 QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
Q E L + T+ + + D+ND P F Y S+ E V +V ATD D G
Sbjct: 1002 QAYDAGEPSLEGSLTLTVIILDVNDNGPVFTMGFYPVSILENLPISTPVVQVEATDNDRG 1061
Query: 132 QNAVVYYSVP--EDIP-FVVDANTGDIRTNKALDYEKQQLY 169
NA++ Y++ D P F V G + T + LD E + +
Sbjct: 1062 ANALITYTLTPNNDSPYFAVFPREGWLYTRQVLDRELKSTF 1102
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP-FV 147
+ VTD ND P F+ Y+ ++PE Q +AV V+A+D D G NA + YS + P F
Sbjct: 2376 VIVTDENDNAPVFRQESYQVTLPELTQPNVAVVAVNASDKDIGLNAELTYSFVDSHPSFY 2435
Query: 148 VDANTGDIRTNKALDYE----KQQLYL 170
+D TG I TN+ +++ QLY+
Sbjct: 2436 IDPITGVIFTNQVIEFNDVETTIQLYV 2462
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 75/189 (39%), Gaps = 21/189 (11%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN---------- 65
SL Y LG + V A D+D+ +FG V Y + + D N
Sbjct: 720 SLNYRGHIEYDAALGTEVKLVVAEDRDAREFGRVTYTIDSSTNDGTFAINQTTGLITLVG 779
Query: 66 -LD----PATEHQGPIQDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
LD P + D GG +S A V I V + PEF+S Y FSV E +
Sbjct: 780 SLDWVQHPVYTLEVIATDGGGRTSANHAQVTITVAGPDTSPPEFESSSYAFSVQENAAQV 839
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTN-KALDYEKQQLYLERVF 174
VG V A D G + Y++ P F ++ +G+I T D+E+Q L +
Sbjct: 840 LVGAVKAGHIDPGITFPITYTLTSGDPNDFFRINTTSGEIFTRGSGPDHEQQAFVLITIQ 899
Query: 175 LISKFATSY 183
S +Y
Sbjct: 900 AASGMPPTY 908
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 83 SSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV- 140
S++ +V I + D ND P+F Q L Y + V ATDAD G N ++ Y++
Sbjct: 1427 STSISVTINILDQNDNTPDFDQDLIYLTLQENVGINHVLWTVSATDADSGANGLIRYTIL 1486
Query: 141 PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
E F VD TG +RT + +D+E ++L
Sbjct: 1487 TEQDFFAVDEYTGTLRTIQNVDHEINHVFL 1516
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 65/162 (40%), Gaps = 25/162 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNN-TDAASYFNLDPATEHQGPIQDE------------ 79
++ V ATD+D G G VEY ++ +D + + A +G + E
Sbjct: 2617 ILTVHATDRDIGYNGEVEYSIISGTYSDLFAIDVVSGAVTVRGELDREEVERVEFTVQAS 2676
Query: 80 -----GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
L+S V I +TD N+ P F L Y F VPE V A D D G+
Sbjct: 2677 DRGMENQLASVVLVTITITDFNEFPPYFPQLFYHFLVPENMPVETYVFTAGALDNDAGEY 2736
Query: 134 AVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
+ YS+ P F +D TG++ T DYE Y
Sbjct: 2737 GELTYSIRGLGPSNGDDYFTIDPVTGEVFTAAVFDYESANSY 2778
Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSVP 141
++TA V I V DIND +P F + YE + E + VHATD D G N V YS+
Sbjct: 2579 NATAEVVIEVEDINDHSPIFDHVQYEGRIAENATASTYILTVHATDRDIGYNGEVEYSII 2638
Query: 142 EDI---PFVVDANTGDIRTNKALDYEKQQLYLERV 173
F +D +G + LD E+ +ERV
Sbjct: 2639 SGTYSDLFAIDVVSGAVTVRGELDREE----VERV 2669
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Query: 76 IQDEGGLSST---ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
IQ G+ T VNI V D+ND P+F + S+PE G ++ A D D G
Sbjct: 898 IQAASGMPPTYDDVQVNITVIDVNDNVPQFMAQTARTSIPESTGIGSSIYVATAMDLDSG 957
Query: 132 QNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQ 166
N +V Y S P + +V+A TG+I NK + Y Q
Sbjct: 958 DNGLVRYRLTSNPGNTFRIVEA-TGEIILNKEVSYNDQ 994
Score = 42.7 bits (99), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 70/172 (40%), Gaps = 32/172 (18%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
S+ Y + + T++ V ATD D G G V Y LDN T F++DP EH G
Sbjct: 1867 SMSYYKSIPESTAINATILTVVATDDDEGLNGDV-YYTLDNTT--IGLFSIDP--EH-GE 1920
Query: 76 IQDEGGL-----------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
I G S V I ++D+ND P F+++P +V
Sbjct: 1921 ITTTGKFDYEKETRYTFQVTATDSGVFGPRSERVQVIIDISDVNDNAPVFKTIPIRANVT 1980
Query: 113 E-GQDGLAVGRVHATDADEGQNAVVYYS-VPEDIPFVVDANTGDIRTNKALD 162
+ V V A D D G N V Y + F +D TG I T K+L+
Sbjct: 1981 QDASSNTFVANVEADDKDSGVNGEVNYRFTQQSSSFAIDTVTGVI-TTKSLN 2031
Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 44/101 (43%), Gaps = 11/101 (10%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD--GLAVGRVHATDADEGQNAVVY 137
G + + V IR+ D ND NP F F V E + V ATDADEG N +
Sbjct: 154 GEMFTALVVTIRLNDTNDNNPIFSQDNRTFEVTEAVQPYMTKINGVTATDADEGINGIQG 213
Query: 138 YSVPE---DIPFVVDAN---TG---DIRTNKALDYEKQQLY 169
Y + D F +D TG DI NK LD E +Y
Sbjct: 214 YRIVGGNIDNTFDLDVRVRETGVYMDIVVNKTLDRETISMY 254
Score = 39.3 bits (90), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 71/164 (43%), Gaps = 29/164 (17%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------EHQGPIQ- 77
V ++ V A+DKD G + Y +D++ F +DP T + + IQ
Sbjct: 2405 VAVVAVNASDKDIGLNAELTYSFVDSHPS----FYIDPITGVIFTNQVIEFNDVETTIQL 2460
Query: 78 -----DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
D G LS TV I +TD+N+++P F Y SV E G V V A D D
Sbjct: 2461 YVTATDSGAPALSEFVTVRIEITDVNNQSPVFVEDIYSASVSENVSLGHHVITVVAEDMD 2520
Query: 130 -EGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+N+ + Y + + F +DAN G I + LD E Y
Sbjct: 2521 LSPENSKINYFIESGNDQGKFKIDANDGSITVLERLDREATDTY 2564
>gi|291395185|ref|XP_002714138.1| PREDICTED: cadherin 6, type 2 preproprotein-like [Oryctolagus
cuniculus]
Length = 789
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 89/189 (47%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + +G +++QV ATD D +G V Y +L YF++DP +
Sbjct: 163 LYTASVPEMSGIGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGVIK 218
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
++Q IQ + GGLS T TVNI +TD+N+ P F Y+F P
Sbjct: 219 TALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQFHSP 278
Query: 113 EGQ-DGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYE 164
E G +GR+ A D D G+NA V YS+ E D+ D G I + LD+E
Sbjct: 279 ESAPPGTHLGRIKANDPDVGENAEVEYSIAEGEGADMFDVITDKDTQEGIITVKQNLDFE 338
Query: 165 KQQLYLERV 173
K++LY RV
Sbjct: 339 KKKLYTLRV 347
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPKFTKDLYTASVPEMSGIGTSVIQVTATDADDANYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRT 157
F VD +G I+T
Sbjct: 207 YFSVDPESGVIKT 219
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D G + Y + F++D NTGDI K LD E++ LY+
Sbjct: 68 GTDTQYVGKLH-TDQDNGDGNLKYILTGDGAGSLFIIDENTGDIHAAKKLDREEKSLYIL 126
Query: 172 RVFLISK 178
R I +
Sbjct: 127 RAKAIDR 133
>gi|340723065|ref|XP_003399918.1| PREDICTED: protocadherin-like wing polarity protein stan-like
[Bombus terrestris]
Length = 3163
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 84/166 (50%), Gaps = 28/166 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G T++ V ATD D GK + Y L + ++AS F ++P T G I
Sbjct: 819 IGTTVLVVSATDSDVGKNAQITYSLGTDGGESASEFTINPQT---GAITTTRTLDRELVP 875
Query: 79 ---------EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHA 125
+GG LS T V I VTD+ND P F++ Y+ S+PE G +V RV A
Sbjct: 876 GYFLTVTARDGGVPPLSDTINVEISVTDVNDNAPVFEAPQYQGSIPEDVAGGTSVLRVSA 935
Query: 126 TDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
TDAD N V Y++ + D F +D++TG IRT K LD E +Y
Sbjct: 936 TDADTDLNGRVRYALDDDGDGAFAIDSSTGVIRTAKPLDRESVAMY 981
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 84/184 (45%), Gaps = 35/184 (19%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPAT--- 70
A R+ +G T++ VKATD+D+G+ VEY +L N D A F +DP T
Sbjct: 373 ASIREGVPVGSTVVTVKATDQDAGRNAEVEYSILSTTSGSGVANADDALTFRIDPRTGVV 432
Query: 71 EHQGPIQDE-------------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
+ P+ E S+ AT+ +RV D ND P+F Y +
Sbjct: 433 TTRTPLDREKTEVYTVILSVSDQATPPSARKSANATLVVRVLDDNDNYPQFTERTYSAWI 492
Query: 112 PEGQDGLA---VGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEK 165
PE D A + R+ ATDAD G NA V Y++ F +D+ GD+ K LDYE
Sbjct: 493 PEDLDYTANPVIARIRATDADSGNNAAVRYAIIGGNTQNTFSIDSMIGDVALVKPLDYES 552
Query: 166 QQLY 169
+ Y
Sbjct: 553 TRSY 556
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 75/164 (45%), Gaps = 27/164 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPI----Q 77
+ +++ATD DSG V Y ++ NT D A LD + I Q
Sbjct: 504 IARIRATDADSGNNAAVRYAIIGGNTQNTFSIDSMIGDVALVKPLDYESTRSYKIVIRAQ 563
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNA 134
D G S+T + + V D+ND P F + ++ SV E G ++ R+ A DADEG NA
Sbjct: 564 DGGSPARSNTTQLLVHVGDVNDNAPRFYTSHFQESVSENVPIGYSMLRIQAYDADEGANA 623
Query: 135 VVYYSV---------PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ Y++ E+ P V+ TG I T K LD E+ Y
Sbjct: 624 QIKYTIGARDFSGASTENFPITVNTETGWIYTTKQLDREQCSRY 667
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 30/171 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQDEG------ 80
G ++++V ATD D+ G V Y LD++ D A F +D +T P+ E
Sbjct: 927 GTSVLRVSATDADTDLNGRVRY-ALDDDGDGA--FAIDSSTGVIRTAKPLDRESVAMYTL 983
Query: 81 ----------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
LS+ V I++ D+ND P F++ + E G VG ++A D D
Sbjct: 984 KAVAMDRGSPSLSTVVPVTIKIQDVNDSPPAFENDKIVLYIAENSPIGSTVGEIYAHDPD 1043
Query: 130 EGQNAVVYYSV---PEDIPFVVDANTG----DIRTNKALDYEKQQLYLERV 173
EG NAVV YSV + F ++ +G ++ T + LDYE + E V
Sbjct: 1044 EGPNAVVQYSVIGGEDSNSFALNVRSGADRAELITLEELDYESPKKKFELV 1094
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG + TA V + V+D N+ P F++ PY S+ E G V V ATD+D G+NA +
Sbjct: 780 DSGGRTDTALVYVNVSDANNFEPVFENTPYAVSLFEDAPIGTTVLVVSATDSDVGKNAQI 839
Query: 137 YYSVPED-----IPFVVDANTGDIRTNKALDYE 164
YS+ D F ++ TG I T + LD E
Sbjct: 840 TYSLGTDGGESASEFTINPQTGAITTTRTLDRE 872
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 74/187 (39%), Gaps = 40/187 (21%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
Y A+ ++ E G + V+A D + G LLD + A LDP T G +
Sbjct: 265 LYVAVVEEEKEPGAYVTSVRARDPEGGTVRYSMSSLLDARSQA--LLVLDPVT---GRVT 319
Query: 78 DEGGL----------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
L + T T+ + V D ND P F+ E S+ EG
Sbjct: 320 TRARLDRESVDVHYFRVLAVDDSFPPRTGTTTLQVNVLDTNDHAPTFEWPEDEASIREGV 379
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSV------------PEDIPFVVDANTGDIRTNKALD 162
G V V ATD D G+NA V YS+ + + F +D TG + T LD
Sbjct: 380 PVGSTVVTVKATDQDAGRNAEVEYSILSTTSGSGVANADDALTFRIDPRTGVVTTRTPLD 439
Query: 163 YEKQQLY 169
EK ++Y
Sbjct: 440 REKTEVY 446
Score = 38.9 bits (89), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 31/171 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL-------------------DPA 69
+G ++++++A D D G ++Y + + AS N +
Sbjct: 605 IGYSMLRIQAYDADEGANAQIKYTIGARDFSGASTENFPITVNTETGWIYTTKQLDREQC 664
Query: 70 TEHQGPI--QDEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVH 124
+ +Q + D G + S++ATV + VTD+ND +P F YE V E G V V
Sbjct: 665 SRYQFTVIAADSGEVPKSASATVILTVTDVNDNDPYFDPKNYEAVVSEDDPPGTPVTSVT 724
Query: 125 ATDADEGQNAVVYYSVPED-----IPFVVDANTGDIRTNKALDYEKQQLYL 170
ATD DE +A ++Y + G I + LDY++++ ++
Sbjct: 725 ATDPDE--DARIHYEITAGNTRGRFSIASQNGRGLITVAQPLDYKQEKRFV 773
>gi|431917275|gb|ELK16811.1| Cadherin-6 [Pteropus alecto]
Length = 790
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 91/189 (48%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 163 IYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIK 218
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
++Q IQ + GGLS T TVNI +TD+ND P F Y+F+ P
Sbjct: 219 TALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFNTP 278
Query: 113 EGQ-DGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYE 164
E G +GR+ A+DAD G+NA V YS+ E D+ + G I K LD+E
Sbjct: 279 ESSPPGTPIGRMKASDADVGENAAVAYSLTEGEGLDMFDVITDQETQEGIITVKKLLDFE 338
Query: 165 KQQLYLERV 173
K++LY +V
Sbjct: 339 KKKLYTLKV 347
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPIFTKEIYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 207 YFSVESETGIIKTALLNMDRENREQY 232
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ D D G ++ Y + D+ F+++ NTGDI+ K LD E++ +Y+
Sbjct: 68 GSDYQYVGKLHS-DQDRGDGSLKYILSGDGAGDL-FIINENTGDIQATKRLDREEKPVYI 125
Query: 171 ERVFLISK 178
R I++
Sbjct: 126 LRAQAINR 133
>gi|449492322|ref|XP_002199139.2| PREDICTED: cadherin-9 [Taeniopygia guttata]
Length = 802
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 87/189 (46%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + +G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 171 MYTASIPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPETGIIK 226
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
++Q IQ + GGLS T TVNI +TD+ND P F Y+FS P
Sbjct: 227 TALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSSYQFSSP 286
Query: 113 EGQ-DGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYE 164
E G +GR+ A D D G+NA + YS+ DI D G I K LD+E
Sbjct: 287 ESAPPGTPLGRIKANDPDVGENAEIEYSISNGDGSDMFDIITDKDTQEGIITVKKHLDFE 346
Query: 165 KQQLYLERV 173
+ LY +V
Sbjct: 347 NKVLYTLKV 355
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y S+PE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 155 IKIHDINDNEPKFTKDMYTASIPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQP 214
Query: 146 -FVVDANTGDIRT 157
F VD TG I+T
Sbjct: 215 YFSVDPETGIIKT 227
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G + Y + F++D NTGDI K LD E++ LY+
Sbjct: 76 GPDTQYVGKLH-TDQDKGDGNLKYILTGDGAGSLFIIDENTGDIHAAKKLDREEKSLYVL 134
Query: 172 RVFLISK 178
R I +
Sbjct: 135 RAKAIDR 141
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 70/177 (39%), Gaps = 51/177 (28%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL----------------------- 66
G L ++KA D D G+ +EY + +N D + F++
Sbjct: 292 GTPLGRIKANDPDVGENAEIEYSI--SNGDGSDMFDIITDKDTQEGIITVKKHLDFENKV 349
Query: 67 -------------DPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
DP GP +D TA V I V DI D+ P F Y V E
Sbjct: 350 LYTLKVEASNTHPDPRFLQLGPFKD------TAFVKISVEDI-DEPPVFSRPWYLIEVDE 402
Query: 114 -GQDGLAVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEK 165
++G +GRV A D D +NA + YSV D F + + G + +K LD E+
Sbjct: 403 DAKEGSIIGRVVAQDPDIAKNA-IKYSVDRHTDLDRIFNIYSGNGSLFLSKPLDREE 458
>gi|292618218|ref|XP_001921284.2| PREDICTED: protocadherin-16 [Danio rerio]
Length = 3260
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 84/168 (50%), Gaps = 24/168 (14%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQ 73
V L +KATD+D G+ G +EY++ + D F LD ++ Q
Sbjct: 1728 VELFTLKATDRDIGESGRLEYKIKAGDPDGD--FRLDGSSGALSTSRPLDRERKSSYSLQ 1785
Query: 74 GPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE 130
+QD G L+STA+V I V D+ND +P+F S Y V E GL V ATD DE
Sbjct: 1786 VVVQDHGSPSLNSTASVEISVLDVNDNSPKFSSSSYTVDVSEDAAIGLVVLDATATDVDE 1845
Query: 131 GQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
GQN + Y + ++ F VD NTG I T LD EK+ Y +V+ +
Sbjct: 1846 GQNGQILYFLSQEAKGAFTVDPNTGRITTAALLDREKRASYFFQVYAV 1893
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 75/168 (44%), Gaps = 26/168 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT---------------------DAASYFNLD 67
+G L+ V A D D G+ G V YR+ NT + +NL
Sbjct: 1520 VGFVLLYVMAWDADQGENGRVSYRIQSGNTAGRFVLSSNSGSLSILKPLDREEQESYNLT 1579
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
E G Q S+T ++I+V D+ND+ P F+ +E + E Q G ++ +V A+
Sbjct: 1580 IVAEDHGIPQH----STTQVLSIQVIDVNDEAPWFERNEFEAQIRENQPAGTSIIQVTAS 1635
Query: 127 DADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
D D G N +V Y + F ++A TG I + LD E Q Y V+
Sbjct: 1636 DRDHGTNGLVTYGGVTEDGFTINAETGVISATRVLDRELQDHYTITVY 1683
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 72/162 (44%), Gaps = 26/162 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------------EHQ 73
G ++QV A DKD G G + Y +L + +S+F +DP T
Sbjct: 451 GSFVLQVTARDKDQGPNGDIRYSILPDKKTHSSWFTIDPVTGIITTATKLDYETIPKPSI 510
Query: 74 GPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ +GG LSSTA V I + D ND P F S Y S+ E +G V A DAD
Sbjct: 511 KVVATDGGRPPLSSTAVVEIDLQDTNDNEPVFGSSFYNVSIKENTSEGTCFLEVKADDAD 570
Query: 130 EGQNAVVYYSVPE---DIP---FVVDANTGDIRTNKALDYEK 165
G + YS+ P F ++ +G I T+ ALD ++
Sbjct: 571 GGSFGTITYSIGSGSVSAPLSQFSINKESGQICTSTALDRDE 612
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 25/157 (15%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--- 77
A R+ L + + A D D+G +G ++Y L+D+++ F +D ++ G ++
Sbjct: 2665 ASIRENQPLNSAVTVLHAIDYDTGVYGQLKYYLMDHSSPGKDLFFVD---QNSGEVRTKQ 2721
Query: 78 -----------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
D G S+T TV + +T ++ +P F + F VPEG + G +
Sbjct: 2722 IFDFEKVNSFNFIALAVDAGNNSATVTVQVFITGEDEYDPVFTTSDLSFEVPEGAKKGQS 2781
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDI 155
+G V A D D G + +V YS P P F V+ TG I
Sbjct: 2782 IGLVQAKDEDGGVDGIVLYSFPNSSPYFDVNKTTGVI 2818
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 30/172 (17%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EH 72
R+ G +V ATD+D+G + YRLL +TD YF ++ T EH
Sbjct: 1086 RENLPAGTGFGRVSATDRDAGLNSRLTYRLL--HTD--RYFQINSQTGEISTRAALDREH 1141
Query: 73 QGPIQ-----DEGGL---SSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLA---- 119
Q Q +GG S+T T +I V D ND P F + P + + Q+GL
Sbjct: 1142 QSSYQLMVVVQDGGTPPRSATGTAHITVLDENDNAPAFSHTQPGREILIQVQEGLPAGSL 1201
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+G ++A D DEG+N ++YS+ F ++ NTG++R++ L ++ Y
Sbjct: 1202 LGTLNAKDPDEGENGTIFYSLSGSRAERFSLNPNTGELRSSSPLRRAEKAEY 1253
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 17/174 (9%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL--DNNTDAASYFNLDPATEHQGPI 76
+ A R+ G +++QV A+D+D G GLV Y + D T A + +
Sbjct: 1615 FEAQIRENQPAGTSIIQVTASDRDHGTNGLVTYGGVTEDGFTINAETGVISATRVLDREL 1674
Query: 77 QD---------EGGLS---STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVH 124
QD +GG+ + A V+I V D ND P F Y VPE + + +
Sbjct: 1675 QDHYTITVYAKDGGIPPNFAKAKVHITVLDENDNAPAFGLQQYSLEVPENLQPVELFTLK 1734
Query: 125 ATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERVFL 175
ATD D G++ + Y + P F +D ++G + T++ LD E++ Y +V +
Sbjct: 1735 ATDRDIGESGRLEYKIKAGDPDGDFRLDGSSGALSTSRPLDRERKSSYSLQVVV 1788
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 12/92 (13%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEF----SVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE 142
T++I V DIND P F Y S+P+G + L +V A+DADEG N +V Y +
Sbjct: 203 TLDILVQDINDHAPVFNQSRYNAIISESLPQGSNIL---QVFASDADEGDNGLVLYEINR 259
Query: 143 -----DIPFVVDANTGDIRTNKALDYEKQQLY 169
D FV+D +G I NKALDYE ++++
Sbjct: 260 RQSDPDRYFVIDPRSGIITLNKALDYEMRKVH 291
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 72/159 (45%), Gaps = 25/159 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQDEG------ 80
G +++V ATD DS + V+Y + ++ D F++D T + Q P+ E
Sbjct: 2571 GAEILRVTATDPDSAPYAEVQYSI--SSGDDMKLFSVDQWTGAMKLQRPLDRESQNSHVV 2628
Query: 81 --------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
G + A +++ V DIND P F S+ E Q AV +HA D D G
Sbjct: 2629 IVQASDGHGRFALAPISVEVKDINDNRPYFPIATLTASIRENQPLNSAVTVLHAIDYDTG 2688
Query: 132 QNAVVYY-----SVPEDIPFVVDANTGDIRTNKALDYEK 165
+ Y S P F VD N+G++RT + D+EK
Sbjct: 2689 VYGQLKYYLMDHSSPGKDLFFVDQNSGEVRTKQIFDFEK 2727
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 73/169 (43%), Gaps = 28/169 (16%)
Query: 28 ELGVTLMQVKATDKD-SGKFGLVEYRLLDNNTDAASYFNLDPAT---------EHQ---- 73
+ G ++ +ATDKD SG + Y + D FNLDP T +H+
Sbjct: 1409 QAGSSVYTFQATDKDGSGPNSEIRYSVQQRWPDNPDLFNLDPVTGVLKLGRELDHEETSS 1468
Query: 74 ---------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRV 123
+ L + T + VTD ND P F S P SV E Q G + V
Sbjct: 1469 LFLVVQAMDSALDPNQRLWGSVTARVFVTDENDNAPIFSS-PTAVSVMEDQPVGFVLLYV 1527
Query: 124 HATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
A DAD+G+N V Y + FV+ +N+G + K LD E+Q+ Y
Sbjct: 1528 MAWDADQGENGRVSYRIQSGNTAGRFVLSSNSGSLSILKPLDREEQESY 1576
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNA-VVYY 138
G + +AT+ + VTD ND P F +V E G GRV ATD D G N+ + Y
Sbjct: 1055 GRTGSATIRVSVTDENDNAPRFSQERVFLAVRENLPAGTGFGRVSATDRDAGLNSRLTYR 1114
Query: 139 SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ D F +++ TG+I T ALD E Q Y
Sbjct: 1115 LLHTDRYFQINSQTGEISTRAALDREHQSSY 1145
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 58/121 (47%), Gaps = 18/121 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDA---------------ASYFNLDPATEHQG 74
G ++ V ATD+DSG+ G V YR+L + D A + +P+
Sbjct: 2349 GSPVITVTATDRDSGENGKVSYRVLSSTRDGFYVDPKNGTLFIRQKAKFDPEEPSVSIVI 2408
Query: 75 PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEG 131
+D G LSS+ATV +++ D+ND P F L Y+ +V E Q G + + A D D
Sbjct: 2409 EARDGGSPPLSSSATVQVQLMDVNDNAPIFHQLEYKATVSEDQLPGATILTLEAVDGDLS 2468
Query: 132 Q 132
Q
Sbjct: 2469 Q 2469
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 78/172 (45%), Gaps = 29/172 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA-SYFNLDPATEHQG 74
S FY ++ G ++VKA D D G FG + Y + + A S F+++ + G
Sbjct: 544 SSFYNVSIKENTSEGTCFLEVKADDADGGSFGTITYSIGSGSVSAPLSQFSIN---KESG 600
Query: 75 PI---------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP- 112
I D GGLSS+A+V + + DIND P F L Y S+
Sbjct: 601 QICTSTALDRDEGADSFHFTVTATDGGGLSSSASVLVSLEDINDNRPSFYPLNYAVSLST 660
Query: 113 EGQDGLAVGRVHATDADEGQNA-VVYYSVPEDIP--FVVDANTGDIRTNKAL 161
+ G +V RV A D D G N V Y++V F ++ +TG I +++L
Sbjct: 661 QSSPGTSVIRVTAHDPDAGANGRVTYHTVSGGGSSFFTLNKDTGVISLSRSL 712
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 8/116 (6%)
Query: 59 DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
+A S++NL + +G Q SS+ I VTD+ND P F Y ++ EG G
Sbjct: 2516 EALSHYNLTVSVSDRGVPQ----RSSSVPAIITVTDVNDNPPVFGRAEYIVALSEGAAAG 2571
Query: 118 LAVGRVHATDADEGQNAVVYYSVP--EDIP-FVVDANTGDIRTNKALDYEKQQLYL 170
+ RV ATD D A V YS+ +D+ F VD TG ++ + LD E Q ++
Sbjct: 2572 AEILRVTATDPDSAPYAEVQYSISSGDDMKLFSVDQWTGAMKLQRPLDRESQNSHV 2627
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV 140
L + ++ I VTD+ND P F Y+ ++PE G V +V A D D+G N + YS+
Sbjct: 415 LHAESSFTIHVTDVNDNPPLFDQQAYKQTIPEVVYPGSFVLQVTARDKDQGPNGDIRYSI 474
Query: 141 PEDIP-----FVVDANTGDIRTNKALDYE 164
D F +D TG I T LDYE
Sbjct: 475 LPDKKTHSSWFTIDPVTGIITTATKLDYE 503
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 68/164 (41%), Gaps = 35/164 (21%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++QV A D D G+ G V Y + +N + F +DP T G I
Sbjct: 2147 IIQVVAEDVDQGQNGQVTYTIESSN--QSGLFKIDPQT---GSITTTAIMDREIWTQAKL 2201
Query: 78 -----DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
D G L TAT+ + + D+ND +P +P E VPE G + V D D
Sbjct: 2202 VIKATDRGSPKLVGTATITVIIVDLNDNSPTI-PVPREVRVPENSLIGTEITLVTGNDVD 2260
Query: 130 EGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
G V+ YS+ D F +D G + LDYE++ Y
Sbjct: 2261 SG--PVLSYSLQLDASTQGKFDIDRYNGRVSLTAPLDYEERTWY 2302
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 78/179 (43%), Gaps = 32/179 (17%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI 76
L Y + G ++++V A D D+G G V Y + +S+F L+ T G I
Sbjct: 652 LNYAVSLSTQSSPGTSVIRVTAHDPDAGANGRVTYHTVSGG--GSSFFTLNKDT---GVI 706
Query: 77 --------------------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
+D GGL++ A VNI V + P F+ Y F+V E
Sbjct: 707 SLSRSLHGKANSVIPMVISARDGGGLTAPVNARVNISVVGGSVAPPVFEQAQYFFTVSED 766
Query: 115 -QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
G VG V A+ + G + V Y++ P F+VD TG +RT+ LD+E + +
Sbjct: 767 VLRGTEVGVVRASSRN-GVSKDVTYTISAGDPDGYFMVDPETGALRTSLPLDHESRPFF 824
Score = 42.4 bits (98), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
SS VN+ + D+ND P FQ Y + E Q + +V A D D+GQN V Y++
Sbjct: 2109 SSFMAVNLILQDVNDNRPRFQLQNYVTYMHEAQGYDFPIIQVVAEDVDQGQNGQVTYTIE 2168
Query: 142 ---EDIPFVVDANTGDIRTNKALDYE 164
+ F +D TG I T +D E
Sbjct: 2169 SSNQSGLFKIDPQTGSITTTAIMDRE 2194
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD-EGQNAVVYYSVPEDIP 145
+ I V D ND P+F P +PE Q G +V ATD D G N+ + YSV + P
Sbjct: 1381 LEINVQDSNDHAPQFPEDPVTIVIPENTQAGSSVYTFQATDKDGSGPNSEIRYSVQQRWP 1440
Query: 146 -----FVVDANTGDIRTNKALDYEK-QQLYL 170
F +D TG ++ + LD+E+ L+L
Sbjct: 1441 DNPDLFNLDPVTGVLKLGRELDHEETSSLFL 1471
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 60/146 (41%), Gaps = 24/146 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------- 71
Y A+ + G ++QV A+D D G GLV Y + +D YF +DP +
Sbjct: 223 YNAIISESLPQGSNILQVFASDADEGDNGLVLYEINRRQSDPDRYFVIDPRSGIITLNKA 282
Query: 72 --------HQGPIQDEGGLS----STATVNIRVTDINDKNPE----FQSLPYEFSVPEG- 114
H+ +Q S + A V I V D ND P F S + EG
Sbjct: 283 LDYEMRKVHELVVQARDNASHPEITNAFVTIHVRDYNDNQPTMTIIFLSEDGSPQISEGA 342
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV 140
Q G V R+ +D D G+ + V S+
Sbjct: 343 QPGQYVARISVSDPDYGEYSNVNVSL 368
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 65/159 (40%), Gaps = 32/159 (20%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------ 82
+G+ ++ ATD D G+ G + Y L + +A F +DP T G I L
Sbjct: 1831 IGLVVLDATATDVDEGQNGQILYFL---SQEAKGAFTVDPNT---GRITTAALLDREKRA 1884
Query: 83 -----------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ--DGLAVGRV 123
+STA V + + D+ND P F P +V G V +
Sbjct: 1885 SYFFQVYAVDLSPAAPRNSTAQVTVTILDVNDNAPFFIQDPLIINVSSGSVFTHQVVATM 1944
Query: 124 HATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKAL 161
A D D G N V+Y + F +++ TG I+T + L
Sbjct: 1945 RAEDKDFGANGSVFYRFAMPVRGFAINSLTGAIQTTENL 1983
Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 29/179 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQ--------- 77
G L + A D D G+ G + Y L + A F+L+P T P++
Sbjct: 1199 GSLLGTLNAKDPDEGENGTIFYSL---SGSRAERFSLNPNTGELRSSSPLRRAEKAEYSF 1255
Query: 78 -----DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
D G SS+A + I+V +P+ +L + EG + G +G V A D
Sbjct: 1256 TITASDRGAPSQSSSAVLLIQVIGSTRISPKPNTLSMTLNSVEGAKPGSVIGSVRAHDQR 1315
Query: 130 E-GQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSY 183
E N V Y V + F+VD TGD+ + LDYEK Y ++ + F+ +Y
Sbjct: 1316 EVTLNGQVTYLVVGGTDHEGTFMVDRLTGDVYLARELDYEKGSRYTLQI-EVDDFSKAY 1373
>gi|149732972|ref|XP_001500811.1| PREDICTED: cadherin-6-like [Equus caballus]
Length = 790
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 90/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 164 YTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKT 219
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 220 ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPE 279
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEK 165
G +GR+ A+DAD G+NA + YS+ E D+ + G I K LD+EK
Sbjct: 280 SSPPGTPIGRIKASDADVGENAAIEYSITEGEGLDMFDVITDQETQEGIITVKKLLDFEK 339
Query: 166 QQLYLERV 173
+++Y +V
Sbjct: 340 KKVYTLKV 347
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 207 YFSVESETGIIKTALLNMDRENREQY 232
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H+ D D G ++ Y + F+++ NTGDI+ K LD E++ +Y+
Sbjct: 68 GSDYQYVGKLHS-DQDRGDGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYIL 126
Query: 172 RVFLISK 178
R I++
Sbjct: 127 RAQAINR 133
>gi|410949738|ref|XP_003981575.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-6 [Felis catus]
Length = 791
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 90/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 165 YTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKT 220
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 221 ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPE 280
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVPED-----IPFVVDANT--GDIRTNKALDYEK 165
G +GR+ A+DAD G+NA + YS+ E V D T G I K LD+EK
Sbjct: 281 SSPPGTPIGRIKASDADMGENAEIEYSITEGEGLDMFDVVTDQETQEGVITVKKVLDFEK 340
Query: 166 QQLYLERV 173
+++Y +V
Sbjct: 341 KKVYTLKV 348
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKIHDINDNEPIFTKDVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 207
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 208 YFSVESETGIIKTALLNMDRENREQY 233
>gi|449490371|ref|XP_002196098.2| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2
[Taeniopygia guttata]
Length = 2548
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 89/184 (48%), Gaps = 26/184 (14%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---E 71
+ L Y R+ E+G ++ V+ATD D+G + YRLL N DA F +D +
Sbjct: 543 EQLEYRESVRENLEVGYEVLTVRATDGDAGPNANILYRLL-NAGDANEVFEIDSRSGVIR 601
Query: 72 HQGPI------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
+GP+ QD G S+TATV I V D ND P+F Y VPE
Sbjct: 602 TRGPVDREVVDTFELLVEATDQGQDPGPRSATATVRIAVEDDNDNAPQFSERRYVAQVPE 661
Query: 114 G-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+AV +V ATD D+G NA+V+YS+ F +DA TG + LDYE + +
Sbjct: 662 DVVPNVAVLQVMATDRDKGSNALVHYSIVSGNTRGHFYIDAQTGALDVVTPLDYEVTKEF 721
Query: 170 LERV 173
R+
Sbjct: 722 TLRI 725
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 78/165 (47%), Gaps = 22/165 (13%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----LDPATEHQGPIQDE------ 79
V ++QV ATD+D G LV Y ++ NT Y + LD T + E
Sbjct: 667 VAVLQVMATDRDKGSNALVHYSIVSGNTRGHFYIDAQTGALDVVTPLDYEVTKEFTLRIR 726
Query: 80 ---GG---LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
GG LS+ + V I+V D+ND P F S P++ +V E G +V V A DAD G
Sbjct: 727 AQDGGRPPLSNISGLVTIQVLDVNDNAPIFVSTPFQATVLENVPVGYSVIHVQAIDADSG 786
Query: 132 QNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
N+ + Y++ E PF ++ +TG I LD E Y RV
Sbjct: 787 DNSWLVYTLLETGTGFPFTINNSTGWIVVASELDREVVDFYSFRV 831
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 20/169 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------------AASYFN 65
Y A + +G +++ V A D+D+ + ++ Y++ NT +
Sbjct: 866 YSARLNEDAAVGTSVLTVSAVDRDA--YSIITYQISSGNTRNRFSITSQSGGGLISLALP 923
Query: 66 LDPATEHQGPI---QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
LD E Q + +G TA V + VTD N P FQS Y +V E + G V
Sbjct: 924 LDYKLERQYLLTIAASDGTRHDTAQVVVNVTDANTHRPVFQSSHYTINVNEDRPVGTTVV 983
Query: 122 RVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+ ATD D G+NA + Y + + IP F + A+TG + T LDYE Q Y
Sbjct: 984 VISATDEDTGENARITYLMEDSIPQFSIAADTGAVTTQMELDYEDQVSY 1032
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLD----PATEHQGP 75
+++QV ATD+DSG G V Y + + LD P +
Sbjct: 1084 SVLQVSATDRDSGLNGRVFYTFQGGDDGDGDFIIESTSGIVRTLRRLDRENVPLYCLRAF 1143
Query: 76 IQDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G + V I+VT D+ND P F+ ++ V E GL V R+ ATD DEG
Sbjct: 1144 AMDKGIPARRTPVEIQVTVLDVNDNPPVFERDEFDIFVEENSPIGLVVARITATDPDEGT 1203
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 1204 NAQIMYQIVEGNIPEVFQLDIFSGELTALADLDYETKAEYI 1244
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 74/173 (42%), Gaps = 29/173 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPAT---EH 72
Y A + + QV A D D G+ G + Y L D+ ++ F +DP T
Sbjct: 439 YQATVEENQPARTPVTQVTAQDPDEGEAGRLHYSMAALFDSRSN--DLFTVDPVTGAIST 496
Query: 73 QGPIQDEGG----------------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
P+ E S+ AT+ + V+D ND +P F+ L Y SV E +
Sbjct: 497 AAPLDRESKSTHVFRVIAVDHGTPRRSAMATLTVTVSDTNDHDPAFEQLEYRESVRENLE 556
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYE 164
G V V ATD D G NA + Y + + F +D+ +G IRT +D E
Sbjct: 557 VGYEVLTVRATDGDAGPNANILYRLLNAGDANEVFEIDSRSGVIRTRGPVDRE 609
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 30/175 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLD--------------------NNTDAASYFNLDP 68
+G T++ + ATD+D+G+ + Y + D + D SY
Sbjct: 978 VGTTVVVISATDEDTGENARITYLMEDSIPQFSIAADTGAVTTQMELDYEDQVSYTLAIT 1037
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATD 127
A ++ P + S T + I V+D+ND P+F Y+ S+ E +V +V ATD
Sbjct: 1038 ARDNGIPQK-----SDTTYLEILVSDVNDNAPQFLRHSYQGSIYEDVPTFTSVLQVSATD 1092
Query: 128 ADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
D G N V+Y+ D F++++ +G +RT + LD E LY R F + K
Sbjct: 1093 RDSGLNGRVFYTFQGGDDGDGDFIIESTSGIVRTLRRLDRENVPLYCLRAFAMDK 1147
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 32/171 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G+ + ++ ATD D G + Y++++ N F LD + + D
Sbjct: 1187 IGLVVARITATDPDEGTNAQIMYQIVEGNI--PEVFQLDIFSGELTALADLDYETKAEYI 1244
Query: 79 ------EGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRV 123
L S AT+++R+ D ND +P+ ++ F S P G +GR+
Sbjct: 1245 MVVQATSAPLVSRATIHVRLCDTNDNSPQLKNFEILFNNYITNRSSSFPGG----IIGRI 1300
Query: 124 HATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEKQQLYLERV 173
A D D + + ++ V +D +TGD+R + ALD + + RV
Sbjct: 1301 PAYDPDVSDHLTYAFEQGNELNLVLLDPHTGDLRLSPALDNNRPLEAIMRV 1351
Score = 39.3 bits (90), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 25/165 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----LDPATEHQGPI------- 76
+G +++ V+A D DSG + Y LL+ T N + A+E +
Sbjct: 771 VGYSVIHVQAIDADSGDNSWLVYTLLETGTGFPFTINNSTGWIVVASELDREVVDFYSFR 830
Query: 77 ---QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE 130
QD G ++STA+V++ + D+ND +PEF Y + E G +V V A D D
Sbjct: 831 VEAQDHGTPSMASTASVSVTILDVNDNSPEFTQREYSARLNEDAAVGTSVLTVSAVDRDA 890
Query: 131 GQNAVVYYSVPED-----IPFVVDANTGDIRTNKALDYEKQQLYL 170
+++ Y + + G I LDY+ ++ YL
Sbjct: 891 --YSIITYQISSGNTRNRFSITSQSGGGLISLALPLDYKLERQYL 933
>gi|338718925|ref|XP_001917229.2| PREDICTED: LOW QUALITY PROTEIN: cadherin-9-like [Equus caballus]
Length = 789
Score = 80.1 bits (196), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 89/189 (47%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + +G +++QV ATD D +G V Y +L YF++DP +
Sbjct: 163 LYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGIIK 218
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
++Q IQ + GGLS T TVNI +TD+N+ P F Y+F+ P
Sbjct: 219 TALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQFNSP 278
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYE 164
E G +GR+ A D D G+NA + YS+ E D+ D G I + LD+E
Sbjct: 279 ESVPLGTHLGRIKANDPDLGENAEIEYSIAEGDGADVFDVITDKDTQEGIITVKQNLDFE 338
Query: 165 KQQLYLERV 173
K+ LY RV
Sbjct: 339 KKMLYTLRV 347
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPKFTKELYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRT 157
F VD +G I+T
Sbjct: 207 YFSVDPESGIIKT 219
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G + Y + FV+D NTGDI K LD E++ LY+
Sbjct: 68 GTDTQYVGKLH-TDQDKGDGNLKYILTGDGAGSLFVIDENTGDIHAAKKLDREEKSLYIL 126
Query: 172 RVFLISK 178
R I +
Sbjct: 127 RAKAIDR 133
>gi|328778418|ref|XP_624236.3| PREDICTED: protocadherin-like wing polarity protein stan-like [Apis
mellifera]
Length = 3163
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 87/177 (49%), Gaps = 23/177 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLDP---ATEHQGPIQDE----- 79
+G T++ V ATD D GK V Y L DN AS F ++P A P+ E
Sbjct: 819 IGTTVLVVSATDSDVGKNAQVTYSLDTDNGDQTASEFIINPQTGAITTTKPLDREIVPAY 878
Query: 80 --------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATD 127
GG LS T V I VTD+ND P F++ Y+ S+PE G +V RV ATD
Sbjct: 879 LLTVTARDGGIPPLSDTTDVEISVTDVNDNAPVFEAPQYQGSIPEDVLVGTSVLRVSATD 938
Query: 128 ADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATS 182
AD N V Y++ + D F VD+ TG IRT K LD E Y+ + + + + S
Sbjct: 939 ADTDLNGRVRYALEDDGDGAFAVDSTTGIIRTAKPLDRESVAKYILKAVAMDRGSPS 995
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 85/184 (46%), Gaps = 35/184 (19%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPAT--- 70
A R+ +G T++ VKATD+D+G+ VEY +L NT+ A F +DP T
Sbjct: 373 ASIREGVPVGSTVVTVKATDQDAGRNAEVEYSILSTTSSSGTANTEDALIFRIDPRTGVV 432
Query: 71 EHQGPIQDE-------------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
+ P+ E ++ AT+ +RV D ND P+F Y +
Sbjct: 433 TTRTPLDREKTEVYTVILSVSDQATPPSARKTANATLVVRVLDDNDNYPQFTERTYSAWI 492
Query: 112 PEGQDGLA---VGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEK 165
PE D A + R+ ATDAD G NA V Y++ F +D+ GD+ K LDYE
Sbjct: 493 PEDLDYTANPVIARIRATDADSGNNAAVRYAIIGGNTQNTFSIDSMVGDVALVKPLDYES 552
Query: 166 QQLY 169
+ Y
Sbjct: 553 TRSY 556
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 75/164 (45%), Gaps = 27/164 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPI----Q 77
+ +++ATD DSG V Y ++ NT D A LD + I Q
Sbjct: 504 IARIRATDADSGNNAAVRYAIIGGNTQNTFSIDSMVGDVALVKPLDYESTRSYKIVIRAQ 563
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNA 134
D G S+T + + V D+ND P F + ++ SV E G ++ R+ A DADEG NA
Sbjct: 564 DGGSPARSNTTQLLVHVGDVNDNAPRFYTSHFQESVSENVPVGYSILRIQAYDADEGANA 623
Query: 135 VVYYSV---------PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ Y++ E+ P V+ TG + T K LD E+ Y
Sbjct: 624 QIKYTIGARDFTGASTENFPITVNTETGWLYTTKQLDREQCSRY 667
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG + TA V + ++D N+ +P F++ PY SV E G V V ATD+D G+NA V
Sbjct: 780 DSGGRTDTALVYVNISDANNFSPVFENAPYSVSVFEDAPIGTTVLVVSATDSDVGKNAQV 839
Query: 137 YYSVPED------IPFVVDANTGDIRTNKALDYEKQQLYL 170
YS+ D F+++ TG I T K LD E YL
Sbjct: 840 TYSLDTDNGDQTASEFIINPQTGAITTTKPLDREIVPAYL 879
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 76/187 (40%), Gaps = 40/187 (21%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
Y A+ ++ E GV + V+A D + G LLD + A LDP T G +
Sbjct: 265 LYVAVVEEEKEPGVYVTSVRARDPEGGTVRYSMSSLLDARSQA--LLVLDPVT---GRVT 319
Query: 78 DEGGL----------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
L + T T+ + V D ND P F+ E S+ EG
Sbjct: 320 TRARLDRESVDVHYFRVLAVDDSFPPRTGTTTLQVNVLDTNDHAPSFEWPEEEASIREGV 379
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSV-----------PED-IPFVVDANTGDIRTNKALD 162
G V V ATD D G+NA V YS+ ED + F +D TG + T LD
Sbjct: 380 PVGSTVVTVKATDQDAGRNAEVEYSILSTTSSSGTANTEDALIFRIDPRTGVVTTRTPLD 439
Query: 163 YEKQQLY 169
EK ++Y
Sbjct: 440 REKTEVY 446
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 77/172 (44%), Gaps = 30/172 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQDEG----- 80
+G ++++V ATD D+ G V Y L D+ A F +D T P+ E
Sbjct: 927 VGTSVLRVSATDADTDLNGRVRYALEDDGDGA---FAVDSTTGIIRTAKPLDRESVAKYI 983
Query: 81 -----------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
LS+ V I++ D+ND P F++ + E G VG ++A D
Sbjct: 984 LKAVAMDRGSPSLSTVVPVTIKIEDVNDSPPAFENDKIILYIAENSPIGSTVGEIYAHDP 1043
Query: 129 DEGQNAVVYYSV---PEDIPFVVD----ANTGDIRTNKALDYEKQQLYLERV 173
DEG NAVV YSV + F ++ A+ ++ T + LDYE + E V
Sbjct: 1044 DEGPNAVVQYSVIGGEDSNSFALNIRPGADRAELITLEELDYESPKKKFELV 1095
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 31/171 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL-------------------DPA 69
+G ++++++A D D G ++Y + + AS N +
Sbjct: 605 VGYSILRIQAYDADEGANAQIKYTIGARDFTGASTENFPITVNTETGWLYTTKQLDREQC 664
Query: 70 TEHQGPI--QDEGGLS--STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVH 124
+ +Q + D G +S ++ATV + VTD+ND +P F YE V E G V V
Sbjct: 665 SRYQFTVIAADSGEISKSASATVILTVTDVNDNDPYFDPKNYESVVSEDDPPGTPVTSVT 724
Query: 125 ATDADEGQNAVVYYSVPEDIP---FVVDANTGD--IRTNKALDYEKQQLYL 170
ATD DE +A ++Y + F + + G I + LDY++++ ++
Sbjct: 725 ATDPDE--DARIHYEITAGNTRGRFAIASQNGRGLITIAQPLDYKQEKRFV 773
>gi|383849585|ref|XP_003700425.1| PREDICTED: protocadherin-like wing polarity protein stan-like
[Megachile rotundata]
Length = 3164
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 88/177 (49%), Gaps = 23/177 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLDP---ATEHQGPIQDE----- 79
+G T++ V ATD D GK V Y L D +AS F ++P A P+ E
Sbjct: 819 IGTTVLVVSATDSDVGKNAQVTYSLDTDGGDQSASEFTINPQTGAITTTRPLDRELIPAY 878
Query: 80 --------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATD 127
GG LS T V I VTD+ND +P F++ Y+ S+PE G +V RV ATD
Sbjct: 879 LLTVTARDGGVPPLSDTTDVEISVTDVNDNSPVFEAPQYQGSIPEDVLVGTSVLRVSATD 938
Query: 128 ADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATS 182
AD N V Y++ + D F VD+ TG IRT K LD E Y+ + + + + S
Sbjct: 939 ADTDLNGRVRYALDDDGDGAFAVDSTTGIIRTAKPLDRESVARYVLKAIAMDRGSPS 995
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 86/186 (46%), Gaps = 35/186 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPAT- 70
Y A R+ +G T++ VKATD+D+G+ +EY +L N++ F +DP +
Sbjct: 371 YDASVREGVPVGSTVVTVKATDQDAGRNAELEYSILSTTSGSGTANSEDTLIFRIDPRSG 430
Query: 71 --EHQGPIQDE-------------------GGLSSTATVNIRVTDINDKNPEFQSLPYEF 109
+ P+ E ++ AT+ +RV D ND P+F Y
Sbjct: 431 VVTTRTPLDREKTEVYTVILSVSDQATPPSARKTANATLVVRVLDDNDNYPQFTERTYSV 490
Query: 110 SVPEGQDGLA---VGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDY 163
+PE D A + R+ ATDAD G NA V Y++ F +D+ +GD+ K LDY
Sbjct: 491 WIPEDLDYTANPVIARIRATDADSGNNAAVRYAIIGGNTQNTFSIDSMSGDVALVKPLDY 550
Query: 164 EKQQLY 169
E + Y
Sbjct: 551 ESTRSY 556
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 75/164 (45%), Gaps = 27/164 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPI----Q 77
+ +++ATD DSG V Y ++ NT D A LD + I Q
Sbjct: 504 IARIRATDADSGNNAAVRYAIIGGNTQNTFSIDSMSGDVALVKPLDYESTRSYKIVIRAQ 563
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNA 134
D G S+T + + V D+ND P F + ++ SV E G ++ R+ A DADEG NA
Sbjct: 564 DGGSPARSNTTQLLVHVKDVNDNAPRFYTSHFQESVSENVAIGCSILRIQAYDADEGANA 623
Query: 135 VVYYSV---------PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ Y++ E+ P V + TG I T K LD E+ Y
Sbjct: 624 QIKYTIGARDFSGASTENFPITVSSETGWIYTTKQLDREQCSRY 667
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG + TA V + V+D N+ +P F++ PY SV E G V V ATD+D G+NA V
Sbjct: 780 DSGGRTDTALVYVNVSDANNFSPVFENAPYSVSVFEDAPIGTTVLVVSATDSDVGKNAQV 839
Query: 137 YYSVPED------IPFVVDANTGDIRTNKALDYEKQQLYL 170
YS+ D F ++ TG I T + LD E YL
Sbjct: 840 TYSLDTDGGDQSASEFTINPQTGAITTTRPLDRELIPAYL 879
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 78/172 (45%), Gaps = 30/172 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQDEG----- 80
+G ++++V ATD D+ G V Y LD++ D A F +D T P+ E
Sbjct: 927 VGTSVLRVSATDADTDLNGRVRY-ALDDDGDGA--FAVDSTTGIIRTAKPLDRESVARYV 983
Query: 81 -----------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
LS+T V I++ DIND P F++ + E G VG ++A D
Sbjct: 984 LKAIAMDRGSPSLSTTVPVTIKIEDINDSPPAFENDKIVLYIAENSPVGSTVGEIYAHDP 1043
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIR----TNKALDYEKQQLYLERV 173
DEG NAVV YSV + F ++ G R T + LDYE + E V
Sbjct: 1044 DEGPNAVVQYSVIGGEDSNSFALNVRPGSDRAELITLEELDYESPKKKFELV 1095
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 79/188 (42%), Gaps = 41/188 (21%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI 76
L+ GA+ +K + GV + V+A D + G LLD + S LDP + G +
Sbjct: 265 LYMGAVEEEK-DPGVYVTSVRARDPEGGTVRYSMSSLLDARSQ--SLLVLDPVS---GRV 318
Query: 77 QDEGGL----------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
L + + T+ + V D ND P F+ Y+ SV EG
Sbjct: 319 TTRARLDRESVDVHYFKVLAVDDSFPPRTGSTTLQVNVLDANDHAPNFEWPEYDASVREG 378
Query: 115 QD-GLAVGRVHATDADEGQNAVVYYSV-----------PED-IPFVVDANTGDIRTNKAL 161
G V V ATD D G+NA + YS+ ED + F +D +G + T L
Sbjct: 379 VPVGSTVVTVKATDQDAGRNAELEYSILSTTSGSGTANSEDTLIFRIDPRSGVVTTRTPL 438
Query: 162 DYEKQQLY 169
D EK ++Y
Sbjct: 439 DREKTEVY 446
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 31/171 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL-------------------DPA 69
+G ++++++A D D G ++Y + + AS N +
Sbjct: 605 IGCSILRIQAYDADEGANAQIKYTIGARDFSGASTENFPITVSSETGWIYTTKQLDREQC 664
Query: 70 TEHQGPI----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVH 124
+ +Q + E S++ATV + VTD+ND +P F YE V E G V V
Sbjct: 665 SRYQFTVIAADSGEAPKSASATVILTVTDVNDNDPYFDPKNYEAVVSEDDPPGTPVTSVT 724
Query: 125 ATDADEGQNAVVYYSVPED-----IPFVVDANTGDIRTNKALDYEKQQLYL 170
ATD DE +A ++Y + G I + LDY++++ ++
Sbjct: 725 ATDPDE--DARIHYEITTGNTRGRFSIASQNGRGLITVAQPLDYKQEKRFV 773
>gi|449268810|gb|EMC79648.1| Cadherin-10 [Columba livia]
Length = 789
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 87/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 164 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARIIYSILQGQPYFSVEPETGIIRTAL 222
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F VPE
Sbjct: 223 PNMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTIHLRVPESS 282
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G A+G V ATDAD G+NA V Y + + DI D G I K LDYE ++
Sbjct: 283 PVGTAIGSVKATDADTGKNAEVEYRIIDGDGTDMFDIVTQKDTQEGIITVRKPLDYETRR 342
Query: 168 LYLERV 173
LY +V
Sbjct: 343 LYTLKV 348
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A + YS+ + P
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARIIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|410924209|ref|XP_003975574.1| PREDICTED: cadherin-6-like [Takifugu rubripes]
Length = 808
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 85/183 (46%), Gaps = 33/183 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y ++ ++G +++QV ATD D G +G +L+ + + YF++DP T
Sbjct: 162 YTGTVPERSDIGTSVIQVTATDADDGMYG-NSAKLVYSISQGHPYFSVDPNTGVIRTALG 220
Query: 71 ----------------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
E + GGL+ T VNI +TD+ND P F Y+F VPE
Sbjct: 221 PGDMDREQRENYQVVIEAKDMAGQRGGLTGTTMVNITLTDVNDNPPRFTQSIYQFRVPES 280
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQ 166
+ G VGR+ A D D G+NA +Y+++ DI G I +K LDYEK+
Sbjct: 281 SKSGTPVGRIRAADKDVGKNAEMYFTIVSGDGLDTFDIFTDKATQEGVITVSKPLDYEKK 340
Query: 167 QLY 169
Y
Sbjct: 341 PSY 343
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 51/88 (57%), Gaps = 8/88 (9%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G +V +V ATDAD+ G +A + YS+ + P
Sbjct: 145 IKLHDINDNEPHFSQEVYTGTVPERSDIGTSVIQVTATDADDGMYGNSAKLVYSISQGHP 204
Query: 146 -FVVDANTGDIRTNKA---LDYEKQQLY 169
F VD NTG IRT +D E+++ Y
Sbjct: 205 YFSVDPNTGVIRTALGPGDMDREQRENY 232
>gi|126320889|ref|XP_001364843.1| PREDICTED: cadherin-6 [Monodelphis domestica]
Length = 790
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 164 YTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKT 219
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 220 ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPE 279
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEK 165
G +GR+ A DAD G+NA + YS+ E D+ + G I K LD+EK
Sbjct: 280 SAPPGTPIGRIKAIDADVGENAEIEYSITEGEGLDMFDVITDQETQEGIITVKKVLDFEK 339
Query: 166 QQLYLERV 173
++LY +V
Sbjct: 340 KKLYTLKV 347
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPMFTKDVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 207 YFSVESETGIIKTALLNMDRENREQY 232
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H+ D D G ++ Y + F+++ NTGDI+ K LD E++ +Y+
Sbjct: 68 GSDYQYVGKLHS-DQDRGDGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYIL 126
Query: 172 RVFLISK 178
R I++
Sbjct: 127 RAQAINR 133
>gi|350594189|ref|XP_003359784.2| PREDICTED: cadherin-6-like [Sus scrofa]
Length = 790
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 90/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 164 YTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKT 219
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 220 ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPE 279
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEK 165
G +GR+ A+DAD G+NA + YS+ E D+ + G I K LD+EK
Sbjct: 280 SSPPGTPIGRIKASDADMGENAEIEYSITEGEGLDMFDVITDQETQEGIITVKKILDFEK 339
Query: 166 QQLYLERV 173
+++Y +V
Sbjct: 340 KKVYTLKV 347
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 207 YFSVESETGIIKTALLNMDRENREQY 232
Score = 36.2 bits (82), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H+ D D G ++ Y + F+++ NTGDI+ + LD E++ +Y+
Sbjct: 68 GSDYQYVGKLHS-DQDRGDGSLKYILSGDGAGDLFIINENTGDIQATRRLDREEKPVYIL 126
Query: 172 RVFLISK 178
R I++
Sbjct: 127 RAQAINR 133
>gi|426246682|ref|XP_004017121.1| PREDICTED: cadherin-6 [Ovis aries]
Length = 790
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 90/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 164 YTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKT 219
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 220 ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPE 279
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEK 165
G +GR+ A+DAD G+NA + YS+ E D+ + G I K LD+EK
Sbjct: 280 SSPPGTPIGRIKASDADMGENAEIEYSITEGEGLDMFDVITDQETQEGIITVKKLLDFEK 339
Query: 166 QQLYLERV 173
+++Y +V
Sbjct: 340 KKVYTLKV 347
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 207 YFSVESETGIIKTALLNMDRENREQY 232
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H+ D D G ++ Y + F+++ NTGDI+ K LD E++ +Y+
Sbjct: 68 GSDYQYVGKLHS-DQDRGDGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYIL 126
Query: 172 RVFLISK 178
R I++
Sbjct: 127 RAQAINR 133
>gi|301769067|ref|XP_002919952.1| PREDICTED: cadherin-6-like [Ailuropoda melanoleuca]
gi|281342394|gb|EFB17978.1| hypothetical protein PANDA_008625 [Ailuropoda melanoleuca]
Length = 790
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 90/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 164 YTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKT 219
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 220 ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPE 279
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVPED-----IPFVVDANT--GDIRTNKALDYEK 165
G +GR+ A+DAD G+NA + YS+ E V D T G I K LD+EK
Sbjct: 280 SSPPGTPIGRIKASDADMGENAEIEYSITEGEGLDMFDVVTDQETQEGVITVKKLLDFEK 339
Query: 166 QQLYLERV 173
+++Y +V
Sbjct: 340 KKVYTLKV 347
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPIFTKDVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 207 YFSVESETGIIKTALLNMDRENREQY 232
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H+ D D G ++ Y + F+++ NTGDI+ K LD E++ +Y+
Sbjct: 68 GSDYQYVGKLHS-DQDRGDGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYIL 126
Query: 172 RVFLISK 178
R I++
Sbjct: 127 RAQAINR 133
>gi|47215611|emb|CAG11642.1| unnamed protein product [Tetraodon nigroviridis]
Length = 839
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 33/183 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y ++ ++G +++QV ATD D G +G +L+ + + YF++DP T
Sbjct: 133 YTGSVPERSDIGTSVIQVTATDADDGMYG-NSAKLVYSISQGHPYFSVDPNTGVIRTALG 191
Query: 71 ---------EHQGPIQD-------EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
EH + + GGL+ T VNI +TD+ND P F Y+F VPE
Sbjct: 192 PGDMDREQREHYQVVIEAKDMAGQRGGLTGTTVVNITLTDVNDNPPRFTQSIYQFRVPES 251
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQ 166
+ G VGR+ A D D G+NA +Y+++ DI G I +K LDYEK+
Sbjct: 252 SESGTPVGRIRAADKDIGENAEMYFTIVSGDGLDTFDIFTDKATQEGVITVSKPLDYEKK 311
Query: 167 QLY 169
Y
Sbjct: 312 PSY 314
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 8/88 (9%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE D G +V +V ATDAD+ G +A + YS+ + P
Sbjct: 116 IKLHDINDNEPHFSQEVYTGSVPERSDIGTSVIQVTATDADDGMYGNSAKLVYSISQGHP 175
Query: 146 -FVVDANTGDIRTNKA---LDYEKQQLY 169
F VD NTG IRT +D E+++ Y
Sbjct: 176 YFSVDPNTGVIRTALGPGDMDREQREHY 203
>gi|327276779|ref|XP_003223145.1| PREDICTED: cadherin-9-like [Anolis carolinensis]
Length = 788
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 91/188 (48%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A +K +G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 164 YTASVPEKSVVGTSVIQVTATDADDSNYGNSAKVVYSILQ----GQPYFSVDPETGIIKT 219
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F+ E
Sbjct: 220 ALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFTSLE 279
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYSV-----PEDIPFVVDANT--GDIRTNKALDYEK 165
G ++GR+ A D D G+NA + YS+ + + D T G I K LD+EK
Sbjct: 280 SAPLGTSLGRIKANDPDVGENAEIEYSIAAGDGSDMFDIITDKGTQEGIITVKKQLDFEK 339
Query: 166 QQLYLERV 173
+ +Y+ +V
Sbjct: 340 KNVYILKV 347
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPKFTKDTYTASVPEKSVVGTSVIQVTATDADDSNYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRT 157
F VD TG I+T
Sbjct: 207 YFSVDPETGIIKT 219
Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G+ + Y + FV+D NTGDI K LD E++ LY+
Sbjct: 68 GPDTQYVGKLH-TDQDQGEGNLKYILTGDGAGSLFVIDENTGDIHAAKRLDREEKSLYVL 126
Query: 172 RVFLISK 178
R I +
Sbjct: 127 RAKAIDR 133
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 43 SGKFGLVEYRLLDNNTDAASYFNLDP-ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPE 101
SG + + LD +AA + NL ATE P Q S+ A + IR+ DIND PE
Sbjct: 435 SGNGSIFVSKTLDR--EAAPWHNLTVIATEISNPKQ-----STQAPIFIRILDINDHAPE 487
Query: 102 FQSLPYEFSVPEGQDGLAVGRVHATDADE 130
F F + G + + A D DE
Sbjct: 488 FAKYYETFVCENAKAGQLIQTISAVDKDE 516
>gi|291395191|ref|XP_002714142.1| PREDICTED: cadherin 6, type 2 preproprotein-like [Oryctolagus
cuniculus]
Length = 790
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 90/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 164 YTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKT 219
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 220 ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPE 279
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEK 165
G +GR+ A+DAD G+NA + YS+ + D+ + G I K LD+EK
Sbjct: 280 SSPPGTPIGRIKASDADMGENAEIEYSITDGEGLDMFDVITDQETQEGIITVKKLLDFEK 339
Query: 166 QQLYLERV 173
Q++Y +V
Sbjct: 340 QKVYTLKV 347
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 207 YFSVESETGIIKTALLNMDRENREQY 232
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H+ D D G ++ Y + F+++ NTGDI+ K LD E++ +Y+
Sbjct: 68 GSDYQYVGKLHS-DQDRGDGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYIL 126
Query: 172 RVFLISK 178
R I++
Sbjct: 127 RAQAINR 133
>gi|77736223|ref|NP_001029812.1| cadherin-6 precursor [Bos taurus]
gi|122140080|sp|Q3SWX5.1|CADH6_BOVIN RecName: Full=Cadherin-6; Flags: Precursor
gi|74356303|gb|AAI04619.1| Cadherin 6, type 2, K-cadherin (fetal kidney) [Bos taurus]
gi|296475724|tpg|DAA17839.1| TPA: cadherin-6 precursor [Bos taurus]
gi|440912592|gb|ELR62149.1| Cadherin-6 [Bos grunniens mutus]
Length = 790
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 90/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 164 YTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKT 219
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 220 ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPE 279
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEK 165
G +GR+ A+DAD G+NA + YS+ E D+ + G I K LD+EK
Sbjct: 280 SSPPGTPIGRIKASDADVGENAEIEYSITEGEGLDMFDVITDQETQEGIITVKKLLDFEK 339
Query: 166 QQLYLERV 173
+++Y +V
Sbjct: 340 KKVYTLKV 347
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 207 YFSVESETGIIKTALLNMDRENREQY 232
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ D D G ++ Y + D+ F+++ NTGDI+ K LD E++ +Y+
Sbjct: 68 GSDYQYVGKLHS-DQDRGDGSLKYILSGDGAGDL-FIINENTGDIQATKRLDREEKPVYI 125
Query: 171 ERVFLISK 178
R I++
Sbjct: 126 LRAQAINR 133
>gi|410915828|ref|XP_003971389.1| PREDICTED: protocadherin-16-like [Takifugu rubripes]
Length = 3314
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 87/182 (47%), Gaps = 25/182 (13%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------ 70
L+YG + E V L +KATD DSG G +EYR+ + D F+L P+T
Sbjct: 1765 LWYGLEVPENQE-PVQLCFLKATDPDSGAGGELEYRITAGDPDGD--FHLHPSTGALSTS 1821
Query: 71 ---------EHQGPI--QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQD 116
EH + D G LS+T TV ++V D+ND +P F Y V E +
Sbjct: 1822 RGLDRETRAEHILEVVATDRGSPALSTTVTVQVQVMDVNDNSPVFSESSYSLEVSEDAAE 1881
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVF 174
G V V A DAD+ N V Y + D F VD NTG I T+ ALD EK Y +VF
Sbjct: 1882 GYQVLEVSAADADDALNGKVLYFLSHDAHGAFTVDENTGIITTSAALDREKWPSYNFQVF 1941
Query: 175 LI 176
+
Sbjct: 1942 AV 1943
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 78/168 (46%), Gaps = 26/168 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASY-----------FNLD 67
+G ++ V A D+D G+ G V YR+ LD +T + S FNL
Sbjct: 1570 VGFVILYVMARDEDEGEHGRVSYRIQAGNSAGRFRLDADTGSLSILKALDREEQDVFNLT 1629
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
E G Q LS + ++++V D+ND+ P FQ +E V E Q G V RV A
Sbjct: 1630 IVAEDHGIPQ----LSRSQVLSVQVIDVNDEAPVFQRAEFEAQVTENQGPGTTVLRVTAV 1685
Query: 127 DADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
D D+G N V Y + FV++ TG I T K LD E Q Y V+
Sbjct: 1686 DRDQGSNGHVTYGGVTEEGFVINPVTGVITTTKELDSEAQGHYTLTVY 1733
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 25/157 (15%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--- 77
A R+ + + A D D+G FG ++Y ++D + F++D ++ G I+
Sbjct: 2713 ASIRENQPANSAVTVLHAIDHDTGVFGKLKYLMIDRSGAGKDSFSVD---QNSGEIRSKI 2769
Query: 78 -----------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
D G S+T TV + VT ++ +P F S + F VPEG + G +
Sbjct: 2770 PFDFEKINSFSFVALAIDSGNHSATVTVQVFVTGEDEYDPVFLSSDFSFEVPEGAKKGQS 2829
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDI 155
+G+V A D D G + +V YS+P P F V+ TG I
Sbjct: 2830 IGQVQANDEDAGVDGIVLYSLPTSSPYFDVNKTTGVI 2866
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 70/169 (41%), Gaps = 23/169 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-----------NTDAASYF 64
S FY A ++ G ++V ATD+D G FG V Y L ++
Sbjct: 581 SNFYNASIKENTPAGTCFLEVSATDEDRGSFGAVSYALGSPSGSSPPGPFTVGKESGRLC 640
Query: 65 NLDPATEHQGP--------IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQ 115
P QG D GGLS+ A V + V DIND P F + Y S+
Sbjct: 641 TSTPLDRDQGADKFDLTVTATDGGGLSAAARVRVWVVDINDNRPAFYPVLYAVSLSTHSS 700
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKAL 161
G +V RV A D D G N V Y + F ++ +TG I +++L
Sbjct: 701 PGTSVVRVTANDPDSGANGRVTYRIAPAGGSAFFTLNKDTGVISLSRSL 749
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 71/162 (43%), Gaps = 26/162 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------EHQGP-- 75
G ++QV A DKD G G V YRLL + + +F++DP T P
Sbjct: 488 GSFVLQVTARDKDQGPNGDVRYRLLKSKNSHSDWFSIDPVTGIITTATVLDFESEPAPSV 547
Query: 76 ---IQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
D G LSSTA V+I + D+ND P F S Y S+ E G V ATD D
Sbjct: 548 TVVAMDNGRPPLSSTAKVDIVLQDVNDNTPVFSSNFYNASIKENTPAGTCFLEVSATDED 607
Query: 130 EGQNAVVYYSV------PEDIPFVVDANTGDIRTNKALDYEK 165
G V Y++ PF V +G + T+ LD ++
Sbjct: 608 RGSFGAVSYALGSPSGSSPPGPFTVGKESGRLCTSTPLDRDQ 649
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 78/178 (43%), Gaps = 26/178 (14%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY----------- 63
D+L Y R+ L +QV+A + ++ + YRL + DAA +
Sbjct: 1006 DTLTYRVELRENTPLNTRFLQVRALNTEASGSAAISYRLRPDG-DAAGFGIMPDGGWLFV 1064
Query: 64 -FNLDPATEH---------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
+LD + GP G + +ATV + VTD ND +P +V E
Sbjct: 1065 RSSLDREVKDMYLLTVLATSGP--GGAGRTGSATVRVTVTDENDNSPRLSQERVFLAVRE 1122
Query: 114 G-QDGLAVGRVHATDADEGQNA-VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G GRV ATD D G NA + Y + D F +++ TG++ T ALD E+Q Y
Sbjct: 1123 NLLAGTGFGRVSATDRDAGLNARLTYRLLHTDRHFQINSQTGEVSTRLALDREQQSSY 1180
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G T+++V A D+D G G V Y + F ++P T E QG
Sbjct: 1676 GTTVLRVTAVDRDQGSNGHVTYGGVTEEG-----FVINPVTGVITTTKELDSEAQGHYTL 1730
Query: 78 ----DEGGLS---STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADE 130
+GGL + A V + V D+ND P F L Y VPE Q+ + + + ATD D
Sbjct: 1731 TVYARDGGLPPNFAKALVRVEVQDVNDNAPVFAKLWYGLEVPENQEPVQLCFLKATDPDS 1790
Query: 131 GQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
G + Y + P F + +TG + T++ LD E + ++ V
Sbjct: 1791 GAGGELEYRITAGDPDGDFHLHPSTGALSTSRGLDRETRAEHILEV 1836
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE--- 142
T+ + VTDIND P F Y + E G ++ +V ATD DEG N +V Y +
Sbjct: 240 TLEVIVTDINDHAPMFNQSRYHAIISESLPQGSSILQVFATDEDEGDNGLVLYEINRRQS 299
Query: 143 --DIPFVVDANTGDIRTNKALDYEKQQLY 169
D FV+D TG I N+ LDYE ++++
Sbjct: 300 DPDRYFVMDVKTGVITLNRPLDYELKRVH 328
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 26/158 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EH 72
G ++++V A D DSG G V YR+ +++F L+ T
Sbjct: 702 GTSVVRVTANDPDSGANGRVTYRIAP--AGGSAFFTLNKDTGVISLSRSLHGKANTVISM 759
Query: 73 QGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ +D GGL++ A VN+ V +P F+ Y F+VPE G +G V A+ A
Sbjct: 760 EISAEDGGGLTAPVNARVNVSVVGGAVASPVFEQAQYFFTVPEDVLRGTPLGVVRAS-AK 818
Query: 130 EGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
G + YSV P F VDA++G IRT LD+E
Sbjct: 819 TGAPKDILYSVSSGDPDGYFTVDASSGTIRTALPLDHE 856
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 79/172 (45%), Gaps = 30/172 (17%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EH 72
R+ G +V ATD+D+G + YRLL +TD +F ++ T E
Sbjct: 1121 RENLLAGTGFGRVSATDRDAGLNARLTYRLL--HTD--RHFQINSQTGEVSTRLALDREQ 1176
Query: 73 QGPIQ-----DEGGL---SSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGL----A 119
Q Q +GG S+T T +I V D ND P F + P + E +GL
Sbjct: 1177 QSSYQLVVVVQDGGTPPRSATGTAHITVLDENDNAPAFSHTRPDRELLLEVMEGLPAGTV 1236
Query: 120 VGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+G V A D DEG+N V+YS+ F ++ TG+++T L + ++ Y
Sbjct: 1237 LGTVTAKDPDEGENGTVHYSLSGARAERFTLNPVTGELKTAFPLSWGERSEY 1288
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 62 SYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAV 120
S++NL +G Q +++ T+ D+ND P F Y S+ EG G +
Sbjct: 2567 SFYNLTVVVSDRGVPQKSSSVAAVLTIG----DVNDNPPVFSRAEYSVSLSEGAAAGTEI 2622
Query: 121 GRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
R+ ATD D NA V Y++ E F +D TG +R + LD E Q +
Sbjct: 2623 IRLTATDPDSTPNAEVQYTISSGDEVNLFTIDQWTGALRLQRTLDREHQATH 2674
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 76/175 (43%), Gaps = 31/175 (17%)
Query: 14 SDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT--- 70
S SL GA A G ++++ ATD DS V+Y + ++ D + F +D T
Sbjct: 2609 SVSLSEGAAA------GTEIIRLTATDPDSTPNAEVQYTI--SSGDEVNLFTIDQWTGAL 2660
Query: 71 --------EHQGP----IQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
EHQ IQ D G + A V + V D+ND +P F S+ E Q
Sbjct: 2661 RLQRTLDREHQATHSVIIQATDGQGHFALAPVIVEVKDVNDNHPFFPVEVLTASIRENQP 2720
Query: 117 G-LAVGRVHATDADEGQNAVVYY-----SVPEDIPFVVDANTGDIRTNKALDYEK 165
AV +HA D D G + Y S F VD N+G+IR+ D+EK
Sbjct: 2721 ANSAVTVLHAIDHDTGVFGKLKYLMIDRSGAGKDSFSVDQNSGEIRSKIPFDFEK 2775
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPED 143
+ T + VTD ND P F S P SV E Q G + V A D DEG++ V Y +
Sbjct: 1539 SVTARVFVTDENDNAPVFSS-PSAVSVMEDQPVGFVILYVMARDEDEGEHGRVSYRIQAG 1597
Query: 144 IP---FVVDANTGDIRTNKALDYEKQQLY 169
F +DA+TG + KALD E+Q ++
Sbjct: 1598 NSAGRFRLDADTGSLSILKALDREEQDVF 1626
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 23/104 (22%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----EHQGPIQDE----- 79
G T++ V ATD+DSG+ G + Y ++ + D F +DP +H+ E
Sbjct: 2397 GSTVVTVTATDRDSGENGKITYSVMSSTQDG---FYIDPNNGTLFIDHRAEFDPERPAVS 2453
Query: 80 -------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
GG LSS TV ++++D+ND P F Y +V E
Sbjct: 2454 IVIVARDGGSPSLSSLTTVQVQISDVNDNAPVFHQSEYRATVSE 2497
Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDI 144
A + I + DIND P F Y+ S+PE G V V ATD D G+N + YSV
Sbjct: 2365 ANITILIEDINDNTPAFTHDLYQVSLPEHTPAGSTVVTVTATDRDSGENGKITYSVMSST 2424
Query: 145 P--FVVDANTGDIRTNKALDYEKQQ 167
F +D N G + + +++ ++
Sbjct: 2425 QDGFYIDPNNGTLFIDHRAEFDPER 2449
Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 77/184 (41%), Gaps = 28/184 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------- 71
Y A+ + G +++QV ATD+D G GLV Y + +D YF +D T
Sbjct: 260 YHAIISESLPQGSSILQVFATDEDEGDNGLVLYEINRRQSDPDRYFVMDVKTGVITLNRP 319
Query: 72 --------HQGPIQDEGGLS----STATVNIRVTDINDKNPE----FQSLPYEFSVPEG- 114
H+ +Q S + A V I V D ND P F S + EG
Sbjct: 320 LDYELKRVHELVVQARDNASHPEVTNAFVTIHVRDYNDNQPTMTIIFLSEDGSPRISEGA 379
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSVP-EDIPFVV---DANTGDIRTNKALDYEKQQLYL 170
Q G V R+ TD D G+ A V S+ D F + D+ I ++ LD E++ Y
Sbjct: 380 QPGQYVARISVTDPDYGEYANVNVSLEGGDGKFALKTKDSIIYLIYVDQELDREERDSYE 439
Query: 171 ERVF 174
RV
Sbjct: 440 LRVM 443
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV 140
L + ++ I+VTD+ND P F Y ++PE G V +V A D D+G N V Y +
Sbjct: 452 LRAESSFTIQVTDVNDNPPLFDQQAYRQTIPEVVYPGSFVLQVTARDKDQGPNGDVRYRL 511
Query: 141 PEDIP-----FVVDANTGDIRTNKALDYEKQ 166
+ F +D TG I T LD+E +
Sbjct: 512 LKSKNSHSDWFSIDPVTGIITTATVLDFESE 542
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 65/158 (41%), Gaps = 27/158 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G + Q +A D + G + Y L N A N ++ + +Q GL
Sbjct: 2089 GTAVAQAQAQHPDGTRRG-ISYSLFSGNRKKAFIIN---SSTGEIRVQSSKGLDFEDTPR 2144
Query: 83 ----------SSTA--TVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
SST+ +N+ + D+ND P FQ Y + E Q L + +V A D D
Sbjct: 2145 LRLVVKADSVSSTSFMAINLILQDVNDNLPRFQLKNYVAYMREAQGYDLPIIQVVAEDVD 2204
Query: 130 EGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
+GQN V YS+ F +D TG I T +D E
Sbjct: 2205 QGQNGQVTYSIQSSGMSGLFKIDPVTGSITTAAIMDRE 2242
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 68/172 (39%), Gaps = 31/172 (18%)
Query: 14 SDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQ 73
S+S + ++ D E G +++V A D D G V Y L + DA F +D E+
Sbjct: 1867 SESSYSLEVSEDAAE-GYQVLEVSAADADDALNGKVLYFL---SHDAHGAFTVD---ENT 1919
Query: 74 GPIQDEGGL-----------------------SSTATVNIRVTDINDKNPEFQSLPYEFS 110
G I L +S+A V + V D+ND P F P
Sbjct: 1920 GIITTSAALDREKWPSYNFQVFAVDLSPAAPRNSSAQVTVAVLDVNDNAPVFTQDPLVIE 1979
Query: 111 VPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKAL 161
V + + A D D G N V+Y + F +++ TG+I+ + L
Sbjct: 1980 VSSRHSQRVLATMKAEDKDFGANGSVFYRFATAVKGFSINSLTGEIQATEPL 2031
>gi|449272686|gb|EMC82483.1| Cadherin-12 [Columba livia]
Length = 794
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + +G ++QVKATD D +G V Y +L YF++DP T
Sbjct: 165 YVASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQ----GQPYFSIDPKTGVIRT 220
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGL+ T TVNI +TD+ND P F + VPE
Sbjct: 221 ALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTTVNITLTDVNDNPPRFPKSIFHLKVPE 280
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYS-VPED----IPFVVDANT--GDIRTNKALDYEK 165
G A+GR+ A D D GQNA + Y+ VP D D NT G I+ K LD+E
Sbjct: 281 SSHVGSAIGRIRAVDPDFGQNAEIEYNIVPGDGGNLFDITTDENTQEGVIKLKKPLDFET 340
Query: 166 QQLYLERV 173
++ Y +V
Sbjct: 341 KKAYTFKV 348
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY SVPE G V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKVQDINDNEPKFLDGPYVASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQP 207
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F +D TG IRT +D E ++ Y
Sbjct: 208 YFSIDPKTGVIRTALPNMDREVKEQY 233
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 77/192 (40%), Gaps = 46/192 (23%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL------------DNNTDA--- 60
S+F+ + H +G + +++A D D G+ +EY ++ D NT
Sbjct: 272 SIFHLKVPESSH-VGSAIGRIRAVDPDFGQNAEIEYNIVPGDGGNLFDITTDENTQEGVI 330
Query: 61 -------------------ASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPE 101
AS +LD GP +D TATV I V D+ D+ P
Sbjct: 331 KLKKPLDFETKKAYTFKVEASNLHLDHRFHSVGPFKD------TATVKINVLDM-DEPPV 383
Query: 102 FQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY-SVPEDIP--FVVDANTGDIRT 157
F Y V E G +G V A D D G ++V Y+ D+ F +DA G I T
Sbjct: 384 FSKPTYTMEVYEDTPVGTIIGAVTAQDLDAGSSSVRYFIDWKNDVDNYFTIDATEGTIAT 443
Query: 158 NKALDYEKQQLY 169
N+ LD E Y
Sbjct: 444 NELLDRESTAQY 455
>gi|224045062|ref|XP_002199117.1| PREDICTED: cadherin-10 [Taeniopygia guttata]
Length = 789
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 87/185 (47%), Gaps = 31/185 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 165 YTASVPEMSVVGTSVVQVTATDADDPSYG-NSARIIYSILQGQPYFSVEPETGIIRTALP 223
Query: 71 --------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
++Q IQ + GGLS T TVNI +TD+ND P F +PE
Sbjct: 224 NMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTIHLRIPESSP 283
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQL 168
G A+G V ATDAD G+NA V Y + + DI D G I K LDYE ++L
Sbjct: 284 VGTAIGSVKATDADTGKNAEVEYRIIDGDGTDMFDIVTQKDTQEGIITVRKPLDYETRRL 343
Query: 169 YLERV 173
Y +V
Sbjct: 344 YTLKV 348
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A + YS+ + P
Sbjct: 148 IKIHDINDNEPTFPEEVYTASVPEMSVVGTSVVQVTATDADDPSYGNSARIIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|326672577|ref|XP_003199697.1| PREDICTED: cadherin-10-like, partial [Danio rerio]
Length = 547
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 92/185 (49%), Gaps = 31/185 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +M+V A+D D +G +L+ + YF+++P T
Sbjct: 88 YVASVSEMSNVGAFVMKVTASDADDEAYG-NSAKLVYSILQGQPYFSIEPETGVIRTALP 146
Query: 71 -------EH-QGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
EH Q IQ + GGLS T TVNI + D+N+ P F Y S PE +
Sbjct: 147 NMIRENREHYQVVIQAKDMAGQMGGLSGTTTVNITLLDVNNSPPRFPHSNYHLSTPESTE 206
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANT---GDIRTNKALDYEKQQL 168
G +VGR+ A DAD G+NA ++YS+ E D+ ++ +T G I K LDYE ++L
Sbjct: 207 IGSSVGRIKAYDADVGENAEMWYSILEGDGQDVFNIITDSTSQEGVIMVKKQLDYESRRL 266
Query: 169 YLERV 173
Y RV
Sbjct: 267 YSLRV 271
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 39/177 (22%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL-DPATEHQGPI---------- 76
E+G ++ ++KA D D G+ + Y +L+ D FN+ +T +G I
Sbjct: 206 EIGSSVGRIKAYDADVGENAEMWYSILEG--DGQDVFNIITDSTSQEGVIMVKKQLDYES 263
Query: 77 -------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD- 116
+ +G S TA V I VTD+ D+ P F Y F V E
Sbjct: 264 RRLYSLRVQVTNTHIDRRFEQQGPFSDTAIVRITVTDV-DEPPVFSRALYIFEVDEDSPV 322
Query: 117 GLAVGRVHATDADEGQNAVVY----YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G ++G V A D D + V Y ++ E + F +D+N G I T +ALD E + +
Sbjct: 323 GSSIGIVSARDPDTISHLVKYTIDRHTDLERL-FNIDSNNGTISTLQALDRETSKWH 378
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SV E + G V +V A+DAD+ G +A + YS+ + P
Sbjct: 71 IKIHDINDNEPKFAKDTYVASVSEMSNVGAFVMKVTASDADDEAYGNSAKLVYSILQGQP 130
Query: 146 -FVVDANTGDIRT 157
F ++ TG IRT
Sbjct: 131 YFSIEPETGVIRT 143
>gi|431917280|gb|ELK16816.1| Cadherin-12 [Pteropus alecto]
Length = 656
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 91/190 (47%), Gaps = 42/190 (22%)
Query: 22 MARDKH-----ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT--- 70
M R +H +G ++QVKATD D +G V Y +L YF++DP T
Sbjct: 25 MNRVQHSNLTPHIGAYVLQVKATDADDPTYGNSARVVYSILQ----GQPYFSIDPKTGVI 80
Query: 71 -------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
++Q IQ + GGL+ T TVNI +TD+ND P F + V
Sbjct: 81 RTALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTTVNITLTDVNDNPPRFPKSIFHLKV 140
Query: 112 PEGQD-GLAVGRVHATDADEGQNAVVYYS-VPED----IPFVVDANT--GDIRTNKALDY 163
PE G A+GR+ A D D GQNA + Y+ VP D V D +T G I+ K LD+
Sbjct: 141 PESSPIGSAIGRIRAVDPDFGQNAEIEYNIVPGDGGNLFDIVTDEDTQEGVIKLKKPLDF 200
Query: 164 EKQQLYLERV 173
E ++ Y +V
Sbjct: 201 ETKKAYTFKV 210
>gi|397475345|ref|XP_003809103.1| PREDICTED: cadherin-9 [Pan paniscus]
Length = 789
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 88/189 (46%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + +G +++QV ATD D +G V Y +L YF++DP +
Sbjct: 163 LYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGIIK 218
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
++Q IQ + GGLS T TVNI +TD+N+ P F Y+F+ P
Sbjct: 219 TALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQFNSP 278
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYE 164
E G +GR+ A D D G+NA + YS+ E D+ D G I + LD+E
Sbjct: 279 ESVPLGTHLGRIKANDPDVGENAEMEYSIAEGDGADMFDVITDKDTQEGIITVKQNLDFE 338
Query: 165 KQQLYLERV 173
Q LY RV
Sbjct: 339 NQMLYTLRV 347
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPKFTKDLYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRT 157
F VD +G I+T
Sbjct: 207 YFSVDPESGIIKT 219
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G + Y + FV+D NTGDI K LD E++ LY+
Sbjct: 68 GTDTQYVGKLH-TDQDKGDGNLKYILTGDGAGSLFVIDENTGDIHAAKKLDREEKSLYIL 126
Query: 172 RVFLISK 178
R I +
Sbjct: 127 RAKAIDR 133
>gi|345308129|ref|XP_001508274.2| PREDICTED: cadherin-10 [Ornithorhynchus anatinus]
Length = 788
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 87/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 164 IYAASVPEMSVVGTSVVQVTATDADDPSYG-NSARIIYSILQGQPYFSVEPETGIIRTAL 222
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F VPE
Sbjct: 223 PNMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTVHLRVPESS 282
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G AVG V ATDAD G+NA V Y + + DI + G + K LDYE ++
Sbjct: 283 SVGTAVGSVKATDADTGKNAEVQYRIVDGDGTDMFDIMTQKETQEGILTVRKPLDYESRR 342
Query: 168 LYLERV 173
LY ++
Sbjct: 343 LYTLKI 348
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 72/179 (40%), Gaps = 45/179 (25%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNN-TDA--------------------------- 60
+G + VKATD D+GK V+YR++D + TD
Sbjct: 284 VGTAVGSVKATDADTGKNAEVQYRIVDGDGTDMFDIMTQKETQEGILTVRKPLDYESRRL 343
Query: 61 ------ASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
A ++DP + GP +D T V I + D+ D+ P F Y F V E
Sbjct: 344 YTLKIEAENTHVDPRFYYLGPFKD------TTIVKISIEDV-DEPPVFSRSSYLFEVHED 396
Query: 115 QD-GLAVGRVHATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ G +G V A D D + + + D F + A G I T+K+LD E Q +
Sbjct: 397 IEVGTIIGTVMARDPDSASSPIRFSLDRHTDLDRIFNIHAGNGSIYTSKSLDRELSQWH 455
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A + YS+ + P
Sbjct: 148 IKIHDINDNEPTFPEEIYAASVPEMSVVGTSVVQVTATDADDPSYGNSARIIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|443705216|gb|ELU01871.1| hypothetical protein CAPTEDRAFT_220753 [Capitella teleta]
Length = 9334
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 75/142 (52%), Gaps = 23/142 (16%)
Query: 48 LVEYRLLDNNTDAA-----------SYFNLDPATEHQ--------GPIQDEGGLSSTATV 88
L++YR+L N D + + +LD TE P+ E ++T T+
Sbjct: 649 LLQYRILRGNDDQSFEIDANSGVISTALSLDRETEDYYSLSLAAFDPVSRE---TATTTL 705
Query: 89 NIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP-EDIPFV 147
++ VTD+ND +P F S EFSV E VG V A D DEG NAV+ YSVP E+ F
Sbjct: 706 SVTVTDVNDNSPVFISTQREFSVRENLKNEFVGDVRAIDLDEGDNAVITYSVPAENGFFS 765
Query: 148 VDANTGDIRTNKALDYEKQQLY 169
+DAN G IRT + LDYE+ +
Sbjct: 766 IDANNGQIRTIRPLDYEQSHAH 787
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 68/150 (45%), Gaps = 17/150 (11%)
Query: 36 VKATDKDSGKFGLVEYRL--------LD-NNTDAASYFNLDPATEHQGPI----QDEGGL 82
V+A D D G ++ Y + +D NN + LD H + D G
Sbjct: 740 VRAIDLDEGDNAVITYSVPAENGFFSIDANNGQIRTIRPLDYEQSHAHYLLVTASDRGVS 799
Query: 83 SSTATVNIR--VTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV 140
S + VNI V D D P F + Y+ SVPE + G V V A D DE + ++ Y V
Sbjct: 800 SRQSVVNITILVEDQEDMVPVFINKRYDASVPENEIGFKVATVLAIDEDE-RKSITYTIV 858
Query: 141 PEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
D F +D NTG++ T LDYE+Q Y
Sbjct: 859 RGDTSRFSIDENTGEVTTRSGLDYERQNQY 888
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 30/174 (17%)
Query: 29 LGVTLMQVKATDKD-SGKFGLVEYRLLDNNTDAASYFNLD---------------PATEH 72
+G ++ QV ATD+D + + +V Y + + F+++ P T
Sbjct: 3919 IGTSVAQVSATDQDRNAPYNVVRYNITGREESVSQCFSVNQVTGLVILKRSLYLLPCTAD 3978
Query: 73 QGPIQ----DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVH 124
+ IQ D G +SS A V + V N + P F Y S+ E Q G +
Sbjct: 3979 EFEIQVQAHDLGSPQRVSSMAEVLVSVGR-NKRTPSFTQADYSVSLNEDQTVGSVFETLK 4037
Query: 125 ATDADEGQ--NAVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLYLERV 173
ATD DE N +VY + ++ + F VD+ +GD+R N++L + Y RV
Sbjct: 4038 ATDGDERAPFNQLVYSVIGDNRAPVYFSVDSQSGDVRLNRSLVADNDLSYTLRV 4091
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE 142
S++ V + V D ND +P+F + Y ++PEG V +V A D D G V Y++
Sbjct: 490 STSVDVTVNVLDRNDNSPQFVAKEYSVTIPEGNGRRTVTKVEAIDVDSGFYGEVTYTISS 549
Query: 143 -----DIPFVVDANTGDIRTNKALD 162
F VD TG + +D
Sbjct: 550 VSNGGRQKFDVDPTTGQLYVTSLVD 574
Score = 38.9 bits (89), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 29/164 (17%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE--HQGPIQDEG--------- 80
T+ +V+A D DSG +G V Y + + F++DP T + + D G
Sbjct: 526 TVTKVEAIDVDSGFYGEVTYTISSVSNGGRQKFDVDPTTGQLYVTSLVDRGENYVITIEA 585
Query: 81 -----------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVG-RVHATDA 128
LSS A VN+ V N+ P S Y V E G+ VG ++
Sbjct: 586 KDNPSTSDGSSSLSSVAIVNVDVELANNLAPSIPSAQYSVIVSE---GVVVGSKIFTVPG 642
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ ++ ++ Y + +D F +DAN+G I T +LD E + Y
Sbjct: 643 EDPEDDLLQYRILRGNDDQSFEIDANSGVISTALSLDRETEDYY 686
Score = 38.9 bits (89), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 72/156 (46%), Gaps = 28/156 (17%)
Query: 43 SGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGPIQD---EGG---LS 83
S F V+YR + + A YF++D +T E+Q ++ +GG LS
Sbjct: 2123 SRPFSEVKYRGIGDG-QATVYFDVDESTGQVTVKTNLRGDTENQYTLKVVAYDGGSPPLS 2181
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG--QNAVVYYSV 140
ST V I V D N P+F Y +PE Q G + V A DAD QN + +S+
Sbjct: 2182 STVAVTINV-DRNLNAPQFSPSSYNIQLPENQPLGEVLVTVSARDADANPPQNTL-RFSL 2239
Query: 141 PEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
+D F +DANTG + K+L E + Y R+
Sbjct: 2240 EQDETSDFFQLDANTGSVSLKKSLIGETTERYELRI 2275
Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR-VHATDADEGQNAVVYYSV 140
V + + D+ND P+FQ +PYE + E G + R + ATD D G N+ + + +
Sbjct: 135 VRVEILDVNDNAPQFQGIPYEVLISELTPVGTTIFRQITATDLDAGSNSQIDFDI 189
>gi|426385057|ref|XP_004059053.1| PREDICTED: cadherin-9 [Gorilla gorilla gorilla]
Length = 789
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 88/189 (46%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + +G +++QV ATD D +G V Y +L YF++DP +
Sbjct: 163 LYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGIIK 218
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
++Q IQ + GGLS T TVNI +TD+N+ P F Y+F+ P
Sbjct: 219 TALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQFNSP 278
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYE 164
E G +GR+ A D D G+NA + YS+ E D+ D G I + LD+E
Sbjct: 279 ESVPLGTHLGRIKANDPDVGENAEMEYSIAEGDGADMFDVITDKDTQEGIITVKQNLDFE 338
Query: 165 KQQLYLERV 173
Q LY RV
Sbjct: 339 NQMLYTLRV 347
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPKFTKDLYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRT 157
F VD +G I+T
Sbjct: 207 YFSVDPESGIIKT 219
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G + Y + FV+D NTGDI K LD E++ LY+
Sbjct: 68 GTDTQYVGKLH-TDQDKGDGNLKYILTGDGAGSLFVIDENTGDIHAAKKLDREEKSLYIL 126
Query: 172 RVFLISK 178
R I +
Sbjct: 127 RAKAIDR 133
>gi|90193626|ref|NP_057363.3| cadherin-9 preproprotein [Homo sapiens]
gi|119370307|sp|Q9ULB4.2|CADH9_HUMAN RecName: Full=Cadherin-9; Flags: Precursor
gi|119631152|gb|EAX10747.1| cadherin 9, type 2 (T1-cadherin), isoform CRA_b [Homo sapiens]
Length = 789
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 88/189 (46%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + +G +++QV ATD D +G V Y +L YF++DP +
Sbjct: 163 LYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGIIK 218
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
++Q IQ + GGLS T TVNI +TD+N+ P F Y+F+ P
Sbjct: 219 TALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQFNSP 278
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYE 164
E G +GR+ A D D G+NA + YS+ E D+ D G I + LD+E
Sbjct: 279 ESVPLGTHLGRIKANDPDVGENAEMEYSIAEGDGADMFDVITDKDTQEGIITVKQNLDFE 338
Query: 165 KQQLYLERV 173
Q LY RV
Sbjct: 339 NQMLYTLRV 347
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPKFTKDLYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRT 157
F VD +G I+T
Sbjct: 207 YFSVDPESGIIKT 219
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G + Y + FV+D NTGDI K LD E++ LY+
Sbjct: 68 GTDTQYVGKLH-TDQDKGDGNLKYILTGDGAGSLFVIDENTGDIHAAKKLDREEKSLYIL 126
Query: 172 RVFLISK 178
R I +
Sbjct: 127 RAKAIDR 133
>gi|114600868|ref|XP_001135234.1| PREDICTED: cadherin-9 isoform 1 [Pan troglodytes]
gi|77748079|gb|AAI07595.1| Cadherin 9, type 2 (T1-cadherin) [Homo sapiens]
gi|88683047|gb|AAI13746.1| Cadherin 9, type 2, preproprotein [Homo sapiens]
Length = 789
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 88/189 (46%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + +G +++QV ATD D +G V Y +L YF++DP +
Sbjct: 163 LYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGIIK 218
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
++Q IQ + GGLS T TVNI +TD+N+ P F Y+F+ P
Sbjct: 219 TALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQFNSP 278
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYE 164
E G +GR+ A D D G+NA + YS+ E D+ D G I + LD+E
Sbjct: 279 ESVPLGTHLGRIKANDPDVGENAEMEYSIAEGDGADMFDVITDKDTQEGIITVKQNLDFE 338
Query: 165 KQQLYLERV 173
Q LY RV
Sbjct: 339 NQMLYTLRV 347
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPKFTKDLYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRT 157
F VD +G I+T
Sbjct: 207 YFSVDPESGIIKT 219
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G + Y + FV+D NTGDI K LD E++ LY+
Sbjct: 68 GTDTQYVGKLH-TDQDKGDGNLKYILTGDGAGSLFVIDENTGDIHAAKKLDREEKSLYIL 126
Query: 172 RVFLISK 178
R I +
Sbjct: 127 RAKAIDR 133
>gi|332228107|ref|XP_003263232.1| PREDICTED: cadherin-9 [Nomascus leucogenys]
Length = 789
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 88/189 (46%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + +G +++QV ATD D +G V Y +L YF++DP +
Sbjct: 163 LYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGIIK 218
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
++Q IQ + GGLS T TVNI +TD+N+ P F Y+F+ P
Sbjct: 219 TALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQFNSP 278
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYE 164
E G +GR+ A D D G+NA + YS+ E D+ D G I + LD+E
Sbjct: 279 ESVPLGTHLGRIKANDPDVGENAEMEYSIAEGDGADMFDVITDKDTQEGIITVKQNLDFE 338
Query: 165 KQQLYLERV 173
Q LY RV
Sbjct: 339 NQMLYTLRV 347
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPKFTKDLYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRT 157
F VD +G I+T
Sbjct: 207 YFSVDPESGIIKT 219
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G + Y + FV+D NTGDI K LD E++ LY+
Sbjct: 68 GTDTQYVGKLH-TDQDKGDGNLKYILTGDGAGSLFVIDENTGDIHAAKKLDREEKSLYIL 126
Query: 172 RVFLISK 178
R I +
Sbjct: 127 RAKAIDR 133
>gi|395833102|ref|XP_003789584.1| PREDICTED: cadherin-12 [Otolemur garnettii]
Length = 794
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + +G ++QVKATD D +G V Y +L YF++DP T
Sbjct: 165 YVASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQ----PYFSIDPKTGVIRT 220
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGL+ T TVNI +TD+ND P F + VPE
Sbjct: 221 ALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTTVNITLTDVNDNPPRFPKSIFHLKVPE 280
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYS-VPED----IPFVVDANT--GDIRTNKALDYEK 165
G A+GR+ A D D GQNA + Y+ VP D V D T G I+ K LD+E
Sbjct: 281 SSPIGSAIGRIRAVDPDFGQNAEIEYNIVPGDGGNLFDIVTDEETQEGVIKLKKPLDFET 340
Query: 166 QQLYLERV 173
++ Y +V
Sbjct: 341 KKAYTFKV 348
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P F PY SVPE G V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKVQDINDNEPRFLDGPYVASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQP 207
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F +D TG IRT +D E ++ Y
Sbjct: 208 YFSIDPKTGVIRTALPNMDREVKEQY 233
>gi|6483296|dbj|BAA87416.1| cadherin-9 [Homo sapiens]
Length = 789
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 88/189 (46%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + +G +++QV ATD D +G V Y +L YF++DP +
Sbjct: 163 LYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGIIK 218
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
++Q IQ + GGLS T TVNI +TD+N+ P F Y+F+ P
Sbjct: 219 TALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQFNSP 278
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYE 164
E G +GR+ A D D G+NA + YS+ E D+ D G I + LD+E
Sbjct: 279 ESVPLGTHLGRIKANDPDVGENAEMEYSIAEGDGADMFDVITDKDTQEGIITVKQNLDFE 338
Query: 165 KQQLYLERV 173
Q LY RV
Sbjct: 339 NQMLYTLRV 347
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPKFTKDLYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRT 157
F VD +G I+T
Sbjct: 207 YFSVDPESGIIKT 219
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G + Y + FV+D NTGDI K LD E++ LY+
Sbjct: 68 GTDTQYVGKLH-TDQDKGDGNLKYILTGDGAGSLFVIDENTGDIHAAKKLDREEKSLYIL 126
Query: 172 RVFLISK 178
R I +
Sbjct: 127 RAKAIDR 133
>gi|403306547|ref|XP_003943790.1| PREDICTED: cadherin-9 [Saimiri boliviensis boliviensis]
Length = 789
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 88/189 (46%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + +G +++QV ATD D +G V Y +L YF++DP +
Sbjct: 163 LYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGIIK 218
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
++Q IQ + GGLS T TVNI +TD+N+ P F Y+F+ P
Sbjct: 219 TALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQFNSP 278
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYE 164
E G +GR+ A D D GQNA + YS+ E D+ D G I + LD+E
Sbjct: 279 ESVPLGTHLGRIKANDPDVGQNAEMEYSIAEGDGADMFDVITDKDTQEGIITVKQNLDFE 338
Query: 165 KQQLYLERV 173
+ LY RV
Sbjct: 339 NKMLYTLRV 347
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPKFTKDLYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRT 157
F VD +G I+T
Sbjct: 207 YFSVDPESGIIKT 219
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G + Y + FV+D NTGDI K LD E++ LY+
Sbjct: 68 GTDTQYVGKLH-TDQDKGDGNLKYILTGDGAGSLFVIDENTGDIHAAKKLDREEKSLYIL 126
Query: 172 RVFLISK 178
R I +
Sbjct: 127 RAKAIDR 133
>gi|126320877|ref|XP_001364775.1| PREDICTED: cadherin-10 [Monodelphis domestica]
Length = 788
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 87/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 164 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 222
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F VPE
Sbjct: 223 PNMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFSQNTIHLRVPESS 282
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G A+G V ATDAD G+NA + Y + + DI D G + K LDYE ++
Sbjct: 283 PVGTAIGSVKATDADTGKNAEIEYRIIDGDGTDMFDIITQKDTQEGILTVRKPLDYESRR 342
Query: 168 LYLERV 173
LY +V
Sbjct: 343 LYTLKV 348
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|326917119|ref|XP_003204849.1| PREDICTED: cadherin-10-like [Meleagris gallopavo]
Length = 789
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 87/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 164 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARIIYSILQGQPYFSVEPETGIIRTAL 222
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F +PE
Sbjct: 223 PNMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTIHLRIPESS 282
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G A+G V ATDAD G+NA V Y + + DI D G I K LDYE ++
Sbjct: 283 PVGTAIGSVKATDADIGKNAEVEYRIVDGDGTDMFDIVTQRDTQEGIITVRKPLDYETRR 342
Query: 168 LYLERV 173
LY +V
Sbjct: 343 LYTLKV 348
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A + YS+ + P
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARIIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|344272257|ref|XP_003407951.1| PREDICTED: cadherin-6 [Loxodonta africana]
Length = 790
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 85/184 (46%), Gaps = 29/184 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLL----------DNNTDAASYFN 65
Y A + ++G ++QV ATD D +G V Y +L + + N
Sbjct: 164 YTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQPYFSVESETGIIKTALLN 223
Query: 66 LDPATEHQGPIQDE--------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-D 116
+D Q + + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 224 MDRENREQYHVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPESSPP 283
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
G +GR+ A+DAD G+NA + YS+ E D+ D G I K LD+EK++ Y
Sbjct: 284 GTPIGRIKASDADVGENAEIEYSITEGEGLDMFDVITDQDTQEGIITVKKLLDFEKKKAY 343
Query: 170 LERV 173
+V
Sbjct: 344 TLKV 347
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 207 YFSVESETGIIKTALLNMDRENREQY 232
Score = 36.6 bits (83), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H+ D D G ++ Y + F+++ NTGDI+ K LD E++ +Y+
Sbjct: 68 GSDYQYVGKLHS-DQDRGDGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYIL 126
Query: 172 RVFLISK 178
R +++
Sbjct: 127 RAQAVNR 133
Score = 36.2 bits (82), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 54/138 (39%), Gaps = 31/138 (22%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------- 68
L Y R+ ++ T+ V A D D+ + V+Y + D +TD FN+D
Sbjct: 386 LAYILQIREDAQINTTIGSVTAQDPDAAR-NPVKYSV-DRHTDMDRIFNIDSGNGSIFTS 443
Query: 69 ----------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
ATE P Q SS + I+V D+ND PEF F
Sbjct: 444 KLLDRETLLWHNITVIATEINNPKQ-----SSRVPLYIKVLDVNDNAPEFAEFYETFVCE 498
Query: 113 EGQDGLAVGRVHATDADE 130
+ + + +HA D D+
Sbjct: 499 KAKADQLIQTLHAIDKDD 516
>gi|296194858|ref|XP_002745139.1| PREDICTED: cadherin-9 [Callithrix jacchus]
Length = 789
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 88/189 (46%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + +G +++QV ATD D +G V Y +L YF++DP +
Sbjct: 163 LYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGIIK 218
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
++Q IQ + GGLS T TVNI +TD+N+ P F Y+F+ P
Sbjct: 219 TALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQFNSP 278
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYE 164
E G +GR+ A D D GQNA + YS+ E D+ D G I + LD+E
Sbjct: 279 ESVPLGTHLGRIKANDPDVGQNAEMEYSIAEGDGADMFDVITDKDTQEGIITVKQNLDFE 338
Query: 165 KQQLYLERV 173
+ LY RV
Sbjct: 339 NKMLYTLRV 347
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPKFTKDLYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRT 157
F VD +G I+T
Sbjct: 207 YFSVDPESGIIKT 219
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G + Y + FV+D NTGDI K LD E++ LY+
Sbjct: 68 GTDTQYVGKLH-TDQDKGDGNLKYILTGDGAGSLFVIDENTGDIHAAKKLDREEKSLYIL 126
Query: 172 RVFLISK 178
R I +
Sbjct: 127 RAKAIDR 133
>gi|395510871|ref|XP_003759691.1| PREDICTED: cadherin-10 [Sarcophilus harrisii]
Length = 788
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 87/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 164 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 222
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F VPE
Sbjct: 223 PNMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFSQNTIHLRVPESS 282
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G A+G V ATDAD G+NA + Y + + DI D G + K LDYE ++
Sbjct: 283 PVGTAIGSVKATDADTGKNAEIEYRIIDGDGTDMFDIITQKDTQEGILTVRKPLDYESRR 342
Query: 168 LYLERV 173
LY +V
Sbjct: 343 LYTLKV 348
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|395510875|ref|XP_003759693.1| PREDICTED: cadherin-6 [Sarcophilus harrisii]
Length = 790
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 164 YTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKT 219
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 220 ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPE 279
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEK 165
G +GR+ A DAD G+NA + YS+ + D+ + G I K LD+EK
Sbjct: 280 SAPPGTPIGRIKAIDADVGENAEIEYSITDGEGLDMFDVITDQETQEGIITVKKVLDFEK 339
Query: 166 QQLYLERV 173
++LY +V
Sbjct: 340 KKLYTLKV 347
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPMFTKDVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 207 YFSVESETGIIKTALLNMDRENREQY 232
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H+ D D G ++ Y + F+++ NTGDI+ K LD E++ +Y+
Sbjct: 68 GSDYQYVGKLHS-DQDRGDGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYIL 126
Query: 172 RVFLISK 178
R I++
Sbjct: 127 RAQAINR 133
>gi|327276771|ref|XP_003223141.1| PREDICTED: cadherin-12-like [Anolis carolinensis]
Length = 791
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 90/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + +G ++QVKATD D +G V Y +L YF++DP T
Sbjct: 162 YVASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQ----GQPYFSIDPKTGVIRT 217
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGL+ T TVNI +TD+ND P F + VPE
Sbjct: 218 ALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTTVNITLTDVNDNPPRFPKSIFHLKVPE 277
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYS-VPEDIPFVVDANT------GDIRTNKALDYEK 165
G A+GR+ A D D G+NA + Y+ VP D + D +T G I+ K LD+E
Sbjct: 278 SSLIGSAIGRIRAVDPDSGRNAEIEYTIVPGDGGNLFDISTDENTQEGIIKLKKPLDFET 337
Query: 166 QQLYLERV 173
++ Y +V
Sbjct: 338 KKAYTFKV 345
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY SVPE G V +V ATDAD+ G +A V YS+ + P
Sbjct: 145 IKVQDINDNEPKFLDGPYVASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQP 204
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F +D TG IRT +D E ++ Y
Sbjct: 205 YFSIDPKTGVIRTALPNMDREVKEQY 230
>gi|119631139|gb|EAX10734.1| cadherin 12, type 2 (N-cadherin 2), isoform CRA_a [Homo sapiens]
Length = 637
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 89/185 (48%), Gaps = 31/185 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G ++QVKATD D +G R++ + YF++DP T
Sbjct: 165 YVATVPEMSPVGAYVLQVKATDADDPTYG-NSARVVYSILQGQPYFSIDPKTGVIRTALP 223
Query: 71 --------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
++Q IQ + GGL+ T VNI +TD+ND P F + VPE
Sbjct: 224 NMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPESSP 283
Query: 117 -GLAVGRVHATDADEGQNAVVYYS-VPED----IPFVVDANT--GDIRTNKALDYEKQQL 168
G A+GR+ A D D GQNA + Y+ VP D V D +T G I+ K LD+E ++
Sbjct: 284 IGSAIGRIRAVDPDFGQNAEIEYNIVPGDGGNLFDIVTDEDTQEGVIKLKKPLDFETKKA 343
Query: 169 YLERV 173
Y +V
Sbjct: 344 YTFKV 348
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE G V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKVQDINDNEPKFLDGPYVATVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQP 207
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F +D TG IRT +D E ++ Y
Sbjct: 208 YFSIDPKTGVIRTALPNMDREVKEQY 233
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 60/137 (43%), Gaps = 6/137 (4%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH-QGPIQDEGGLSSTATVNIRVTDIN 96
TD+D+ + + + LD T A F ++ + H G TATV I V D+
Sbjct: 320 VTDEDTQEGVIKLKKPLDFETKKAYTFKVEASNLHLDHRFHSAGPFKDTATVKISVLDV- 378
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY---YSVPEDIPFVVDANT 152
D+ P F Y V E G +G V A D D G +AV Y + D F +D N
Sbjct: 379 DEPPVFSKPLYTMEVYEDTPVGTIIGAVTAQDLDVGSSAVRYFIDWKSDGDSYFTIDGNE 438
Query: 153 GDIRTNKALDYEKQQLY 169
G I TN+ LD E Y
Sbjct: 439 GTIATNELLDRESTAQY 455
>gi|327284139|ref|XP_003226796.1| PREDICTED: cadherin-6-like isoform 2 [Anolis carolinensis]
Length = 794
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 91/185 (49%), Gaps = 29/185 (15%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLL----------DNNTDAASYF 64
Y A + ++G ++QV ATD D +G V Y +L ++ +
Sbjct: 163 IYNASVPEMSDVGTFVVQVTATDADDPTYGNSARVVYSILQGQPYFSVESESGIIKTALL 222
Query: 65 NLDPAT--EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
N+D ++Q IQ + GGLS T TVNI +TD+ND P F Y+F VPE
Sbjct: 223 NMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSAYQFKVPESAP 282
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPED-----IPFVVDANT--GDIRTNKALDYEKQQL 168
AVGR+ A+DAD GQNA + YS+ E + D T G + KALD+EK++
Sbjct: 283 LDSAVGRIKASDADVGQNAEMEYSIIEGDGLEMFGVITDKETQEGIVTVKKALDFEKKRQ 342
Query: 169 YLERV 173
+ +V
Sbjct: 343 FTLKV 347
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPLFTKDIYNASVPEMSDVGTFVVQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ +G I+T +D E ++ Y
Sbjct: 207 YFSVESESGIIKTALLNMDRENREQY 232
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H+ D D+G ++ Y + F+++ NTGDI+ + LD E++ +Y+
Sbjct: 68 GSDYQYVGKLHS-DQDKGDGSLKYILSGDGAGDLFIINENTGDIQATRRLDREEKPVYIL 126
Query: 172 RVFLISK 178
R I+K
Sbjct: 127 RAQAINK 133
>gi|12652559|gb|AAH00019.1| CDH6 protein [Homo sapiens]
gi|119631170|gb|EAX10765.1| cadherin 6, type 2, K-cadherin (fetal kidney), isoform CRA_c [Homo
sapiens]
Length = 663
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 90/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 164 YTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKT 219
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 220 ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPE 279
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEK 165
G +GR+ A+DAD G+NA + YS+ + D+ + G I K LD+EK
Sbjct: 280 SSPPGTPIGRIKASDADVGENAEIEYSITDGEGLDMFDVITDQETQEGIITVKKLLDFEK 339
Query: 166 QQLYLERV 173
+++Y +V
Sbjct: 340 KKVYTLKV 347
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 207 YFSVESETGIIKTALLNMDRENREQY 232
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H+ D D G ++ Y + F+++ NTGDI+ K LD E++ +Y+
Sbjct: 68 GSDYQYVGKLHS-DQDRGDGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYIL 126
Query: 172 RVFLISK 178
R I++
Sbjct: 127 RAQAINR 133
Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 54/138 (39%), Gaps = 31/138 (22%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------- 68
L Y R+ ++ T+ V A D D+ + V+Y + D +TD FN+D
Sbjct: 386 LAYILQIREDAQINTTIGSVTAQDPDAAR-NPVKYSV-DRHTDMDRIFNIDSGNGSIFTS 443
Query: 69 ----------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
ATE P Q SS + I+V D+ND PEF F
Sbjct: 444 KLLDRETLLWHNITVIATEINNPKQ-----SSRVPLYIKVLDVNDNAPEFAEFYETFVCE 498
Query: 113 EGQDGLAVGRVHATDADE 130
+ + + +HA D D+
Sbjct: 499 KAKADQLIQTLHAVDKDD 516
>gi|197097946|ref|NP_001125148.1| cadherin-12 precursor [Pongo abelii]
gi|55727130|emb|CAH90321.1| hypothetical protein [Pongo abelii]
Length = 794
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 90/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + +G ++QVKATD D +G V Y +L YF++DP T
Sbjct: 165 YVATVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQ----PYFSIDPKTGVIRT 220
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGL+ T VNI +TD+ND P F + VPE
Sbjct: 221 ALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPE 280
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYS-VPED----IPFVVDANT--GDIRTNKALDYEK 165
G A+GR+ A D D GQNA + Y+ VP D V D +T G I+ K+LD+E
Sbjct: 281 SSPIGSAIGRIRAVDPDFGQNAEIEYNIVPGDGGNLFDIVTDEDTQEGVIKLKKSLDFET 340
Query: 166 QQLYLERV 173
++ Y +V
Sbjct: 341 KKAYTFKV 348
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE G V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKVQDINDNEPKFLDGPYVATVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQP 207
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F +D TG IRT +D E ++ Y
Sbjct: 208 YFSIDPKTGVIRTALPNMDREVKEQY 233
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 59/137 (43%), Gaps = 6/137 (4%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH-QGPIQDEGGLSSTATVNIRVTDIN 96
TD+D+ + + + LD T A F ++ + H G TATV V D+
Sbjct: 320 VTDEDTQEGVIKLKKSLDFETKKAYTFKVEASNLHLDHRFHSAGPFKDTATVKTSVLDV- 378
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY---YSVPEDIPFVVDANT 152
D+ P F Y V E G +G V A D D G +AV Y + D F +D N
Sbjct: 379 DEPPVFSKPLYTMEVYEDTPVGTIIGAVTAQDLDVGSSAVRYFIDWKSDGDSYFTIDGNE 438
Query: 153 GDIRTNKALDYEKQQLY 169
G I TN+ LD E Y
Sbjct: 439 GTIATNELLDRESTAQY 455
>gi|327284137|ref|XP_003226795.1| PREDICTED: cadherin-6-like isoform 1 [Anolis carolinensis]
Length = 790
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 91/185 (49%), Gaps = 29/185 (15%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLL----------DNNTDAASYF 64
Y A + ++G ++QV ATD D +G V Y +L ++ +
Sbjct: 163 IYNASVPEMSDVGTFVVQVTATDADDPTYGNSARVVYSILQGQPYFSVESESGIIKTALL 222
Query: 65 NLDPAT--EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
N+D ++Q IQ + GGLS T TVNI +TD+ND P F Y+F VPE
Sbjct: 223 NMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSAYQFKVPESAP 282
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPED-----IPFVVDANT--GDIRTNKALDYEKQQL 168
AVGR+ A+DAD GQNA + YS+ E + D T G + KALD+EK++
Sbjct: 283 LDSAVGRIKASDADVGQNAEMEYSIIEGDGLEMFGVITDKETQEGIVTVKKALDFEKKRQ 342
Query: 169 YLERV 173
+ +V
Sbjct: 343 FTLKV 347
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPLFTKDIYNASVPEMSDVGTFVVQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ +G I+T +D E ++ Y
Sbjct: 207 YFSVESESGIIKTALLNMDRENREQY 232
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H+ D D+G ++ Y + F+++ NTGDI+ + LD E++ +Y+
Sbjct: 68 GSDYQYVGKLHS-DQDKGDGSLKYILSGDGAGDLFIINENTGDIQATRRLDREEKPVYIL 126
Query: 172 RVFLISK 178
R I+K
Sbjct: 127 RAQAINK 133
>gi|380014510|ref|XP_003691272.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-like wing polarity
protein stan-like [Apis florea]
Length = 3167
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 87/177 (49%), Gaps = 23/177 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLDP---ATEHQGPIQDE----- 79
+G T++ V ATD D GK V Y L D+ AAS F ++P A P+ E
Sbjct: 819 IGTTVLVVSATDSDVGKNAQVTYSLDTDSGDQAASEFIINPQTGAITTTRPLDRELVPAY 878
Query: 80 --------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATD 127
GG LS T V I VTD+ND P F++ Y+ S+PE G +V RV ATD
Sbjct: 879 LLTVTARDGGVPPLSDTTDVEISVTDVNDNAPVFEAPQYQGSIPEDVLVGTSVLRVSATD 938
Query: 128 ADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATS 182
AD N V Y + + D F VD+ TG IRT K LD E Y+ + + + + S
Sbjct: 939 ADTDLNGRVRYGLEDDGDGAFAVDSTTGIIRTAKPLDRESVGKYVLKAVAMDRGSPS 995
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 82/184 (44%), Gaps = 35/184 (19%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEY-------RLLDNNTDAASYFNLDPAT--- 70
A R+ +G T++ VKATD+D+G+ VEY T+ A F +DP T
Sbjct: 373 ASIREGVPVGSTVVTVKATDQDAGRNAEVEYSILSTTSSSGTATTEDALIFRIDPRTGVV 432
Query: 71 EHQGPIQDE-------------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
+ P+ E ++ AT+ +RV D ND P+F Y +
Sbjct: 433 TTRTPLDREKTEVYTVILSVSDQATPPSARKTANATLVVRVLDDNDNYPQFTERTYSAWI 492
Query: 112 PEGQDGLA---VGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEK 165
PE D A + R+ ATDAD G NA V Y++ F +D+ GD+ K LDYE
Sbjct: 493 PEDLDYTANPVIARIRATDADSGNNAAVRYAIIGGNTQNTFSIDSMIGDVALVKPLDYES 552
Query: 166 QQLY 169
+ Y
Sbjct: 553 TRSY 556
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 75/164 (45%), Gaps = 27/164 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPI----Q 77
+ +++ATD DSG V Y ++ NT D A LD + I Q
Sbjct: 504 IARIRATDADSGNNAAVRYAIIGGNTQNTFSIDSMIGDVALVKPLDYESTRSYKIVIRAQ 563
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNA 134
D G S+T + + V D+ND P F + ++ SV E G ++ R+ A DADEG NA
Sbjct: 564 DGGSPARSNTTQLLVHVGDVNDNAPRFYTSHFQESVSENVPVGYSILRIQAYDADEGANA 623
Query: 135 VVYYSV---------PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ Y++ E+ P V+ TG + T K LD E+ Y
Sbjct: 624 QIKYTIGARDFTGASTENFPITVNTETGWLYTTKQLDREQCSRY 667
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG + TA V + ++D N+ +P F++ PY SV E G V V ATD+D G+NA V
Sbjct: 780 DSGGRTDTALVYVNISDANNFSPVFENAPYSVSVFEDAPIGTTVLVVSATDSDVGKNAQV 839
Query: 137 YYSVPED------IPFVVDANTGDIRTNKALDYEKQQLYL 170
YS+ D F+++ TG I T + LD E YL
Sbjct: 840 TYSLDTDSGDQAASEFIINPQTGAITTTRPLDRELVPAYL 879
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 77/172 (44%), Gaps = 30/172 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQDEG----- 80
+G ++++V ATD D+ G V Y L D+ A F +D T P+ E
Sbjct: 927 VGTSVLRVSATDADTDLNGRVRYGLEDDGDGA---FAVDSTTGIIRTAKPLDRESVGKYV 983
Query: 81 -----------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
LS+ A V I++ D+ND P F++ + E G VG ++A D
Sbjct: 984 LKAVAMDRGSPSLSTVAPVTIKIEDVNDSPPXFENDKIILYIAENSPVGSTVGEIYAHDP 1043
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTG----DIRTNKALDYEKQQLYLERV 173
DEG NAVV YSV + F ++ G ++ T + LDYE + E V
Sbjct: 1044 DEGPNAVVQYSVIGGEDSNSFALNVRPGADRAELITLEELDYESPKKKFELV 1095
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 75/187 (40%), Gaps = 40/187 (21%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
Y A+ ++ E GV + V+A D + G LLD + A LDP T G +
Sbjct: 265 LYVAVVEEEKEPGVYVTSVRARDPEGGTVRYSMSSLLDARSQA--LLVLDPVT---GRVT 319
Query: 78 DEGGL----------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
L + T T+ + V D ND P F+ E S+ EG
Sbjct: 320 TRARLDRESVDVHYFRVLAVDDSFPPRTGTTTLQVNVLDTNDHAPSFEWPEEEASIREGV 379
Query: 116 D-GLAVGRVHATDADEGQNAVVYY-----------SVPED-IPFVVDANTGDIRTNKALD 162
G V V ATD D G+NA V Y + ED + F +D TG + T LD
Sbjct: 380 PVGSTVVTVKATDQDAGRNAEVEYSILSTTSSSGTATTEDALIFRIDPRTGVVTTRTPLD 439
Query: 163 YEKQQLY 169
EK ++Y
Sbjct: 440 REKTEVY 446
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 31/171 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL-------------------DPA 69
+G ++++++A D D G ++Y + + AS N +
Sbjct: 605 VGYSILRIQAYDADEGANAQIKYTIGARDFTGASTENFPITVNTETGWLYTTKQLDREQC 664
Query: 70 TEHQGPI--QDEGGLS--STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVH 124
+ +Q + D G +S ++ATV + VTD+ND +P F YE V E G V V
Sbjct: 665 SRYQFTVIAADSGEISKSASATVILTVTDVNDNDPYFDPKNYESVVSEDDPPGTPVTSVT 724
Query: 125 ATDADEGQNAVVYYSVPEDIP---FVVDANTGD--IRTNKALDYEKQQLYL 170
ATD DE +A ++Y + F + + G I + LDY++++ ++
Sbjct: 725 ATDPDE--DARIHYEITAGNTRGRFAIASQNGRGLITIAQPLDYKQEKRFV 773
>gi|296194856|ref|XP_002745137.1| PREDICTED: cadherin-6 isoform 2 [Callithrix jacchus]
Length = 790
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 92/188 (48%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 164 YTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKT 219
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 220 ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPE 279
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVPE----DIPFVV---DANTGDIRTNKALDYEK 165
G +GR+ A+DAD G+NA + YS+ + D+ V+ + G I K LD+EK
Sbjct: 280 SSPPGTPIGRIKASDADVGENAEIEYSITDGEGLDMFHVITDQETQEGIITVKKLLDFEK 339
Query: 166 QQLYLERV 173
+++Y +V
Sbjct: 340 KKVYTLKV 347
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 207 YFSVESETGIIKTALLNMDRENREQY 232
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H+ D D G ++ Y + F+++ NTGDI+ K LD E++ +Y+
Sbjct: 68 GSDYQYVGKLHS-DQDRGDGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYIL 126
Query: 172 RVFLISK 178
R I++
Sbjct: 127 RAQAINR 133
>gi|197098194|ref|NP_001125246.1| cadherin-6 [Pongo abelii]
gi|55727434|emb|CAH90472.1| hypothetical protein [Pongo abelii]
Length = 790
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 90/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 164 YSATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKT 219
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 220 ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFRTPE 279
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEK 165
G +GR+ A+DAD G+NA + YS+ + D+ + G I K LD+EK
Sbjct: 280 SSPLGTPIGRIKASDADVGENAEIEYSITDGEGLDMFDVITDQETQEGIITVKKLLDFEK 339
Query: 166 QQLYLERV 173
+++Y +V
Sbjct: 340 KKVYTLKV 347
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPIFTKEVYSATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 207 YFSVESETGIIKTALLNMDRENREQY 232
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H+ D D G ++ Y + F+++ NTGDI+ K LD E++ +Y+
Sbjct: 68 GSDYQYVGKLHS-DQDRGDGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYIL 126
Query: 172 RVFLISK 178
R I++
Sbjct: 127 RAQAINR 133
Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 54/138 (39%), Gaps = 31/138 (22%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------- 68
L Y R+ ++ T+ V A D D+ + V+Y + D +TD FN+D
Sbjct: 386 LAYILQIREDAQINTTIGSVTAQDPDAAR-NPVKYSV-DRHTDMDRIFNIDSGNGSIFTS 443
Query: 69 ----------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
ATE P Q SS + I+V D+ND PEF F
Sbjct: 444 KLLDRETLLWHNITVIATEINNPKQ-----SSRVPLYIKVLDVNDNAPEFAEFYETFVCE 498
Query: 113 EGQDGLAVGRVHATDADE 130
+ + + +HA D D+
Sbjct: 499 KAKADQLIQTLHAVDKDD 516
>gi|119631168|gb|EAX10763.1| cadherin 6, type 2, K-cadherin (fetal kidney), isoform CRA_a [Homo
sapiens]
Length = 386
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 90/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 85 YTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKT 140
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 141 ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPE 200
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEK 165
G +GR+ A+DAD G+NA + YS+ + D+ + G I K LD+EK
Sbjct: 201 SSPPGTPIGRIKASDADVGENAEIEYSITDGEGLDMFDVITDQETQEGIITVKKLLDFEK 260
Query: 166 QQLYLERV 173
+++Y +V
Sbjct: 261 KKVYTLKV 268
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 68 IKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 127
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 128 YFSVESETGIIKTALLNMDRENREQY 153
>gi|363730470|ref|XP_418999.3| PREDICTED: cadherin-12 [Gallus gallus]
Length = 859
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + +G ++QVKATD D +G V Y +L YF++DP T
Sbjct: 230 YIASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQ----GQPYFSIDPKTGVIRT 285
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGL+ T TVNI +TD+ND P F + VPE
Sbjct: 286 ALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTTVNITLTDVNDNPPRFPKSIFHLKVPE 345
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYS-VPED----IPFVVDANT--GDIRTNKALDYEK 165
G A+GR+ A D D G+NA + Y+ VP D D NT G I+ K LD+E
Sbjct: 346 SSHVGSAIGRIRAVDPDFGKNAEIEYNIVPGDGGNLFDITTDENTQEGVIKLKKPLDFET 405
Query: 166 QQLYLERV 173
++ Y +V
Sbjct: 406 KKAYTFKV 413
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 77/192 (40%), Gaps = 46/192 (23%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL------------DNNTDA--- 60
S+F+ + H +G + +++A D D GK +EY ++ D NT
Sbjct: 337 SIFHLKVPESSH-VGSAIGRIRAVDPDFGKNAEIEYNIVPGDGGNLFDITTDENTQEGVI 395
Query: 61 -------------------ASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPE 101
AS +LD GP +D TATV I V D+ D+ P
Sbjct: 396 KLKKPLDFETKKAYTFKVEASNLHLDHRFHSVGPFKD------TATVKINVLDM-DEPPV 448
Query: 102 FQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRT 157
F Y V E G +G V A D D G ++V Y + D F +DAN G I T
Sbjct: 449 FSKPLYTMEVYEDTPVGTIIGAVTAQDLDAGSSSVRYFIDWKNDVDSYFTIDANEGTIAT 508
Query: 158 NKALDYEKQQLY 169
N+ LD E Y
Sbjct: 509 NELLDRESTAQY 520
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY SVPE G V +V ATDAD+ G +A V YS+ + P
Sbjct: 213 IKVQDINDNEPKFLDGPYIASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQP 272
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F +D TG IRT +D E ++ Y
Sbjct: 273 YFSIDPKTGVIRTALPNMDREVKEQY 298
>gi|195325632|gb|ACF95724.1| cadherin-6 [Mustela putorius furo]
Length = 607
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 91/186 (48%), Gaps = 31/186 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNN------TDAA----SYFN 65
Y A + ++G ++QV ATD D +G V Y +L ++A + N
Sbjct: 108 YTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQPYFSVESEAGIIKTALLN 167
Query: 66 LDPAT--EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-D 116
+D ++Q IQ + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 168 MDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPESSPP 227
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPED-----IPFVVDANT----GDIRTNKALDYEKQQ 167
G +GR+ A+DAD G+NA + YS+ E V D T G I K LD+EK++
Sbjct: 228 GTPIGRIKASDADMGENAEIEYSITEGEGLDMFDVVTDQETQEPGGVITVKKLLDFEKKK 287
Query: 168 LYLERV 173
+Y +V
Sbjct: 288 VYTLKV 293
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 91 IKIHDINDNEPIFTKDVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 150
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ G I+T +D E ++ Y
Sbjct: 151 YFSVESEAGIIKTALLNMDRENREQY 176
Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H+ D D G ++ Y + F+++ NTGDI+ K LD E++ +Y+
Sbjct: 12 GSDYQYVGKLHS-DQDRGDGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYIL 70
Query: 172 RVFLISK 178
R I++
Sbjct: 71 RAQAINR 77
>gi|76827148|gb|AAI07009.1| Cdh6 protein [Mus musculus]
gi|148671304|gb|EDL03251.1| cadherin 6 [Mus musculus]
Length = 790
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 90/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 164 YTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKT 219
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 220 ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPE 279
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVP-----EDIPFVVDANT--GDIRTNKALDYEK 165
G +GR+ A+DAD G+NA + YS+ E + D T G I K LD+EK
Sbjct: 280 SSPPGTPIGRIKASDADVGENAEIEYSITDGEGHEMFDVITDQETQEGIITVKKLLDFEK 339
Query: 166 QQLYLERV 173
+++Y +V
Sbjct: 340 KKVYTLKV 347
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 207 YFSVESETGIIKTALLNMDRENREQY 232
Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H+ D D G ++ Y + F+++ NTGDI+ K LD E++ +Y+
Sbjct: 68 GSDYQYVGKLHS-DQDRGDGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYIL 126
Query: 172 RVFLISK 178
R +++
Sbjct: 127 RAQAVNR 133
>gi|348568994|ref|XP_003470283.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-6-like [Cavia porcellus]
Length = 790
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 90/189 (47%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 163 IYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIK 218
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
++Q IQ + GGLS T TVNI +TD+ND P F Y+F P
Sbjct: 219 TALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTP 278
Query: 113 EGQ-DGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYE 164
E G +GR+ A+DAD G+NA + YS+ + D+ + G I K LD+E
Sbjct: 279 ESSPPGTPIGRIKASDADIGENAEIVYSITDGEGLDMFDVITDQETQEGIITVRKLLDFE 338
Query: 165 KQQLYLERV 173
K+++Y +V
Sbjct: 339 KKKVYTLKV 347
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPIFTKEIYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 207 YFSVESETGIIKTALLNMDRENREQY 232
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H+ D D G ++ Y + F+++ NTGDI+ K LD E++ +Y+
Sbjct: 68 GSDYQYVGKLHS-DQDRGDGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYIL 126
Query: 172 RVFLISK 178
R I++
Sbjct: 127 RAQAINR 133
>gi|110347562|ref|NP_031692.2| cadherin-6 precursor [Mus musculus]
gi|341940302|sp|P97326.2|CADH6_MOUSE RecName: Full=Cadherin-6; AltName: Full=Kidney cadherin;
Short=K-cadherin; Flags: Precursor
gi|76825288|gb|AAI07014.1| Cdh6 protein [Mus musculus]
Length = 790
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 90/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 164 YTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKT 219
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 220 ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPE 279
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVP-----EDIPFVVDANT--GDIRTNKALDYEK 165
G +GR+ A+DAD G+NA + YS+ E + D T G I K LD+EK
Sbjct: 280 SSPPGTPIGRIKASDADVGENAEIEYSITDGEGHEMFDVITDQETQEGIITVKKLLDFEK 339
Query: 166 QQLYLERV 173
+++Y +V
Sbjct: 340 KKVYTLKV 347
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 207 YFSVESETGIIKTALLNMDRENREQY 232
Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H+ D D G ++ Y + F+++ NTGDI+ K LD E++ +Y+
Sbjct: 68 GSDYQYVGKLHS-DQDRGDGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYIL 126
Query: 172 RVFLISK 178
R +++
Sbjct: 127 RAQAVNR 133
>gi|410260548|gb|JAA18240.1| cadherin 6, type 2, K-cadherin (fetal kidney) [Pan troglodytes]
gi|410289524|gb|JAA23362.1| cadherin 6, type 2, K-cadherin (fetal kidney) [Pan troglodytes]
gi|410330019|gb|JAA33956.1| cadherin 6, type 2, K-cadherin (fetal kidney) [Pan troglodytes]
Length = 790
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 90/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 164 YTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKT 219
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 220 ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPE 279
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEK 165
G +GR+ A+DAD G+NA + YS+ + D+ + G I K LD+EK
Sbjct: 280 SSPPGTPIGRIKASDADVGENAEIEYSITDGEGLDMFDVITDQETQEGIITVKKLLDFEK 339
Query: 166 QQLYLERV 173
+++Y +V
Sbjct: 340 KKVYTLKV 347
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 207 YFSVESETGIIKTALLNMDRENREQY 232
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ D D G ++ Y + D+ F+++ NTGDI+ K LD E++ +Y+
Sbjct: 68 GSDYQYVGKLHS-DQDRGDGSLKYILSGDGAGDL-FIINENTGDIQATKRLDREEKPIYI 125
Query: 171 ERVFLISK 178
R I++
Sbjct: 126 LRAQAINR 133
Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 54/138 (39%), Gaps = 31/138 (22%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------- 68
L Y R+ ++ T+ V A D D+ + V+Y + D +TD FN+D
Sbjct: 386 LAYILQIREDAQINTTIGSVTAQDPDAAR-NPVKYSV-DRHTDMDRIFNIDSGNGSIFTS 443
Query: 69 ----------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
ATE P Q SS + I+V D+ND PEF F
Sbjct: 444 KLLDRETLLWHNITVIATEINNPKQ-----SSRVPLYIKVLDVNDNAPEFAEFYETFVCE 498
Query: 113 EGQDGLAVGRVHATDADE 130
+ + + +HA D D+
Sbjct: 499 KAKADQLIQTLHAVDKDD 516
>gi|355691239|gb|EHH26424.1| Kidney cadherin [Macaca mulatta]
gi|355749842|gb|EHH54180.1| Kidney cadherin [Macaca fascicularis]
gi|380808526|gb|AFE76138.1| cadherin-6 preproprotein [Macaca mulatta]
Length = 790
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 90/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 164 YTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKT 219
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 220 ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPE 279
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEK 165
G +GR+ A+DAD G+NA + YS+ + D+ + G I K LD+EK
Sbjct: 280 SSPPGTPIGRIKASDADVGENAEIEYSITDGEGLDMFDVITDQETQEGIITVKKLLDFEK 339
Query: 166 QQLYLERV 173
+++Y +V
Sbjct: 340 KKVYTLKV 347
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 207 YFSVESETGIIKTALLNMDRENREQY 232
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H+ D D G ++ Y + F+++ NTGDI+ K LD E++ +Y+
Sbjct: 68 GSDYQYVGKLHS-DQDRGDGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYIL 126
Query: 172 RVFLISK 178
R I++
Sbjct: 127 RAQAINR 133
>gi|444725570|gb|ELW66133.1| Cadherin-6 [Tupaia chinensis]
Length = 790
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 90/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 164 YTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKT 219
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 220 ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPE 279
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEK 165
G +GR+ A+DAD G+NA + YS+ + D+ + G I K LD+EK
Sbjct: 280 SSPPGTPIGRIKASDADVGENAEIEYSITDGEGLDMFDVITDQETQEGIITVKKLLDFEK 339
Query: 166 QQLYLERV 173
+++Y +V
Sbjct: 340 KKVYTLKV 347
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 207 YFSVESETGIIKTALLNMDRENREQY 232
Score = 36.2 bits (82), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H+ D D G ++ Y + F+++ NTGDI+ + LD E++ +Y+
Sbjct: 68 GSDYQYVGKLHS-DQDRGDGSLKYILSGDGAGDLFIINENTGDIQATRRLDREEKPVYIL 126
Query: 172 RVFLISK 178
R I++
Sbjct: 127 RAQAINR 133
>gi|410039500|ref|XP_001158019.3| PREDICTED: LOW QUALITY PROTEIN: cadherin-6 isoform 2 [Pan
troglodytes]
Length = 790
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 90/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 164 YTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKT 219
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 220 ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPE 279
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEK 165
G +GR+ A+DAD G+NA + YS+ + D+ + G I K LD+EK
Sbjct: 280 SSPPGTPIGRIKASDADVGENAEIEYSITDGEGLDMFDVITDQETQEGIITVKKLLDFEK 339
Query: 166 QQLYLERV 173
+++Y +V
Sbjct: 340 KKVYTLKV 347
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 207 YFSVESETGIIKTALLNMDRENREQY 232
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ D D G ++ Y + D+ F+++ NTGDI+ K LD E++ +Y+
Sbjct: 68 GSDYQYVGKLHS-DQDRGDGSLKYILSGDGAGDL-FIINENTGDIQATKRLDREEKPVYI 125
Query: 171 ERVFLISK 178
R I++
Sbjct: 126 LRAQAINR 133
Score = 36.6 bits (83), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 54/138 (39%), Gaps = 31/138 (22%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------- 68
L Y R+ ++ T+ V A D D+ + V+Y + D +TD FN+D
Sbjct: 386 LAYILQIREDAQINTTIGSVTAQDPDAAR-NPVKYSV-DRHTDMDRIFNIDSGNGSIFTS 443
Query: 69 ----------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
ATE P Q SS + I+V D+ND PEF F
Sbjct: 444 KLLDRETLLWHNITVIATEINNPKQ-----SSRVPLYIKVLDVNDNAPEFAEFYETFVCE 498
Query: 113 EGQDGLAVGRVHATDADE 130
+ + + +HA D D+
Sbjct: 499 KAKADQLIQTLHAVDKDD 516
>gi|397495449|ref|XP_003818567.1| PREDICTED: cadherin-6 [Pan paniscus]
gi|410224428|gb|JAA09433.1| cadherin 6, type 2, K-cadherin (fetal kidney) [Pan troglodytes]
Length = 790
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 90/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 164 YTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKT 219
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 220 ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPE 279
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEK 165
G +GR+ A+DAD G+NA + YS+ + D+ + G I K LD+EK
Sbjct: 280 SSPPGTPIGRIKASDADVGENAEIEYSITDGEGLDMFDVITDQETQEGIITVKKLLDFEK 339
Query: 166 QQLYLERV 173
+++Y +V
Sbjct: 340 KKVYTLKV 347
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 207 YFSVESETGIIKTALLNMDRENREQY 232
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ D D G ++ Y + D+ F+++ NTGDI+ K LD E++ +Y+
Sbjct: 68 GSDYQYVGKLHS-DQDRGDGSLKYILSGDGAGDL-FIINENTGDIQATKRLDREEKPVYI 125
Query: 171 ERVFLISK 178
R I++
Sbjct: 126 LRAQAINR 133
Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 54/138 (39%), Gaps = 31/138 (22%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------- 68
L Y R+ ++ T+ V A D D+ + V+Y + D +TD FN+D
Sbjct: 386 LAYILQIREDAQINTTIGSVTAQDPDAAR-NPVKYSV-DRHTDMDRIFNIDSGNGSIFTS 443
Query: 69 ----------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
ATE P Q SS + I+V D+ND PEF F
Sbjct: 444 KLLDRETLLWHNITVIATEINNPKQ-----SSRVPLYIKVLDVNDNAPEFAEFYETFVCE 498
Query: 113 EGQDGLAVGRVHATDADE 130
+ + + +HA D D+
Sbjct: 499 KAKADQLIQTLHAVDKDD 516
>gi|426385038|ref|XP_004059045.1| PREDICTED: cadherin-6 [Gorilla gorilla gorilla]
Length = 790
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 90/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 164 YTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKT 219
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 220 ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPE 279
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVPED-----IPFVVDANT--GDIRTNKALDYEK 165
G +GR+ A+DAD G+NA + YS+ + V D T G I K LD+EK
Sbjct: 280 SSPPGTPIGRIKASDADVGENAEIEYSITDGEGLDMFDVVTDQETQEGIITVKKLLDFEK 339
Query: 166 QQLYLERV 173
+++Y +V
Sbjct: 340 KKVYTLKV 347
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 207 YFSVESETGIIKTALLNMDRENREQY 232
Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H+ D D G ++ Y + F+++ NTGDI+ K LD E++ +Y+
Sbjct: 68 GSDYQYVGKLHS-DQDRGDGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYIL 126
Query: 172 RVFLISK 178
R I++
Sbjct: 127 RAQAINR 133
Score = 36.2 bits (82), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 54/138 (39%), Gaps = 31/138 (22%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------- 68
L Y R+ ++ T+ V A D D+ + V+Y + D +TD FN+D
Sbjct: 386 LAYILQIREDAQINTTIGSVTAQDPDAAR-NPVKYSV-DRHTDMDRIFNIDSGNGSIFTS 443
Query: 69 ----------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
ATE P Q SS + I+V D+ND PEF F
Sbjct: 444 KLLDRETLLWHNITVIATEINNPKQ-----SSRVPLYIKVLDVNDNAPEFAEFYETFVCE 498
Query: 113 EGQDGLAVGRVHATDADE 130
+ + + +HA D D+
Sbjct: 499 KAKADQLIQTLHAVDKDD 516
>gi|4826673|ref|NP_004923.1| cadherin-6 preproprotein [Homo sapiens]
gi|1705545|sp|P55285.1|CADH6_HUMAN RecName: Full=Cadherin-6; AltName: Full=Kidney cadherin;
Short=K-cadherin; Flags: Precursor
gi|974185|dbj|BAA06562.1| cadherin-6 [Homo sapiens]
gi|119631169|gb|EAX10764.1| cadherin 6, type 2, K-cadherin (fetal kidney), isoform CRA_b [Homo
sapiens]
gi|158256016|dbj|BAF83979.1| unnamed protein product [Homo sapiens]
Length = 790
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 90/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 164 YTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKT 219
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 220 ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPE 279
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEK 165
G +GR+ A+DAD G+NA + YS+ + D+ + G I K LD+EK
Sbjct: 280 SSPPGTPIGRIKASDADVGENAEIEYSITDGEGLDMFDVITDQETQEGIITVKKLLDFEK 339
Query: 166 QQLYLERV 173
+++Y +V
Sbjct: 340 KKVYTLKV 347
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 207 YFSVESETGIIKTALLNMDRENREQY 232
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ D D G ++ Y + D+ F+++ NTGDI+ K LD E++ +Y+
Sbjct: 68 GSDYQYVGKLHS-DQDRGDGSLKYILSGDGAGDL-FIINENTGDIQATKRLDREEKPVYI 125
Query: 171 ERVFLISK 178
R I++
Sbjct: 126 LRAQAINR 133
Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 54/138 (39%), Gaps = 31/138 (22%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------- 68
L Y R+ ++ T+ V A D D+ + V+Y + D +TD FN+D
Sbjct: 386 LAYILQIREDAQINTTIGSVTAQDPDAAR-NPVKYSV-DRHTDMDRIFNIDSGNGSIFTS 443
Query: 69 ----------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
ATE P Q SS + I+V D+ND PEF F
Sbjct: 444 KLLDRETLLWHNITVIATEINNPKQ-----SSRVPLYIKVLDVNDNAPEFAEFYETFVCE 498
Query: 113 EGQDGLAVGRVHATDADE 130
+ + + +HA D D+
Sbjct: 499 KAKADQLIQTLHAVDKDD 516
>gi|1783299|dbj|BAA11516.1| cadherin-6 [Mus musculus]
Length = 790
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 89/187 (47%), Gaps = 37/187 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 164 YTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKT 219
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 220 ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPE 279
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVP-----EDIPFVVDANT--GDIRTNKALDYEK 165
G +GR+ A+DAD G+NA + YS+ E + D T G I K LD+EK
Sbjct: 280 SSPPGTPIGRIKASDADVGENAEIEYSITDGEGHEMFDVITDQETQEGIITVKKLLDFEK 339
Query: 166 QQLYLER 172
+++Y R
Sbjct: 340 KKVYTLR 346
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 207 YFSVESETGIIKTALLNMDRENREQY 232
>gi|351715648|gb|EHB18567.1| Cadherin-9 [Heterocephalus glaber]
Length = 789
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 88/189 (46%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + +G +++QV ATD D +G V Y +L YF++DP +
Sbjct: 163 LYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGIIK 218
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
++Q IQ + GGLS T TVNI +TD+N+ P F Y F+ P
Sbjct: 219 TALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQNTYHFTSP 278
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPE-----DIPFVVDANT--GDIRTNKALDYE 164
E G +GR+ A D D G NA + YS+ E + D +T G I K LD+E
Sbjct: 279 ESVPLGTHLGRIKANDPDMGTNAEMEYSIAEGDGADTFSVITDKDTQEGIIIVKKNLDFE 338
Query: 165 KQQLYLERV 173
K+ LY RV
Sbjct: 339 KKMLYTLRV 347
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPKFTKDLYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRT 157
F VD +G I+T
Sbjct: 207 YFSVDPESGIIKT 219
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 13/109 (11%)
Query: 61 ASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
AS +LDP H GP +D TA V I V D+ D+ P F L Y V E ++G
Sbjct: 349 ASNTHLDPRFLHLGPFKD------TAVVKISVEDV-DEPPVFDKLSYLMDVDEDVKEGSI 401
Query: 120 VGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYE 164
+G+V A D D N ++ YSV D F + G I T K LD E
Sbjct: 402 IGQVTAHDPD-AMNNLIKYSVDRHTDMDRIFSTHSENGSIFTLKPLDRE 449
Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G + Y + FV+D TGDI K LD E++ LY+
Sbjct: 68 GADTQYVGKLH-TDQDKGDGNLKYILTGDGAGSLFVIDEKTGDIHAAKKLDREEKSLYIL 126
Query: 172 RVFLISK 178
R I +
Sbjct: 127 RAKAIDR 133
>gi|194223990|ref|XP_001501060.2| PREDICTED: cadherin-12 [Equus caballus]
Length = 794
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 89/185 (48%), Gaps = 31/185 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G ++QVKATD D +G R++ + YF++DP T
Sbjct: 165 YVASVPEMSPVGAYVLQVKATDADDPTYG-SSARVVYSILQGQPYFSIDPKTGIIRTALP 223
Query: 71 --------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
++Q IQ + GGL+ T VNI +TD+ND P F + VPE
Sbjct: 224 NMDREVKEQYQVLIQAKDMGGQLGGLAGTTVVNITLTDVNDNPPRFPKSIFHLKVPESSP 283
Query: 117 -GLAVGRVHATDADEGQNAVVYYS-VPEDIPFVVDANT------GDIRTNKALDYEKQQL 168
G A+GR+ A D D GQNA + Y+ VP D + D +T G I+ K LD+E ++
Sbjct: 284 IGSAIGRIRAVDPDFGQNAEIEYNIVPGDGGNLFDISTDEDTQEGVIKLKKPLDFETKKA 343
Query: 169 YLERV 173
Y +V
Sbjct: 344 YTFKV 348
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY SVPE G V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKVQDINDNEPKFLDGPYVASVPEMSPVGAYVLQVKATDADDPTYGSSARVVYSILQGQP 207
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F +D TG IRT +D E ++ Y
Sbjct: 208 YFSIDPKTGIIRTALPNMDREVKEQY 233
>gi|410949740|ref|XP_003981576.1| PREDICTED: cadherin-9 [Felis catus]
Length = 789
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 88/189 (46%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + +G +++QV ATD D +G V Y +L YF++DP +
Sbjct: 163 LYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGIIK 218
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
++Q IQ + GGLS T TVNI +TD+N+ P F Y+F+ P
Sbjct: 219 TALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQFNSP 278
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYE 164
E G VGR+ A D D G+NA + YS+ E D+ D G I + LD+E
Sbjct: 279 ESVPLGTYVGRIKADDPDVGENAEMEYSIAEGDGTDMFDVITDKDTQEGIITVKQNLDFE 338
Query: 165 KQQLYLERV 173
+ LY RV
Sbjct: 339 SKMLYTLRV 347
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPKFTKDLYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRT 157
F VD +G I+T
Sbjct: 207 YFSVDPESGIIKT 219
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G + Y + FV+D NTGDI K LD E++ LY+
Sbjct: 68 GTDTQYVGKLH-TDQDKGDGNLKYILTGDGAGSLFVIDENTGDIHAAKKLDREEKSLYIL 126
Query: 172 RVFLISK 178
R I +
Sbjct: 127 RAKAIDR 133
>gi|403290283|ref|XP_003936252.1| PREDICTED: cadherin-6 [Saimiri boliviensis boliviensis]
Length = 790
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 90/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 164 YTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKT 219
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 220 ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPE 279
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEK 165
G +GR+ A+DAD G+NA + YS+ + D+ + G I K LD+EK
Sbjct: 280 SSPPGTPIGRIKASDADVGENAEIEYSITDGEGLDMFDVITDQETQEGIITVKKLLDFEK 339
Query: 166 QQLYLERV 173
+++Y +V
Sbjct: 340 KKVYTLKV 347
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 207 YFSVESETGIIKTALLNMDRENREQY 232
Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H+ D D G ++ Y + F+++ NTGDI+ K LD E++ +Y+
Sbjct: 68 GSDYQYVGKLHS-DQDRGDGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYIL 126
Query: 172 RVFLISK 178
R I++
Sbjct: 127 RAQAINR 133
>gi|126321116|ref|XP_001374843.1| PREDICTED: cadherin-9 [Monodelphis domestica]
Length = 789
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 88/189 (46%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + +G +++QV ATD D +G + Y +L YF++DP +
Sbjct: 163 LYTASVPEMSGVGTSVIQVLATDADDANYGNSAKIVYSILQ----GQPYFSVDPESGIIK 218
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
++Q IQ + GGLS T TVNI +TD+N+ P F Y+FS
Sbjct: 219 TALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQFSSS 278
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYE 164
E G +GR+ A D D G+NA + YS+ E DI D G I K LD+E
Sbjct: 279 ESVSLGTPLGRIKANDPDVGENAEMEYSLVEGDGSNMFDIITDKDTQEGIITVKKQLDFE 338
Query: 165 KQQLYLERV 173
K+ LY R+
Sbjct: 339 KKMLYTLRI 347
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE G +V +V ATDAD+ G +A + YS+ + P
Sbjct: 147 IKIHDINDNEPKFTKDLYTASVPEMSGVGTSVIQVLATDADDANYGNSAKIVYSILQGQP 206
Query: 146 -FVVDANTGDIRT 157
F VD +G I+T
Sbjct: 207 YFSVDPESGIIKT 219
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G + Y + F++D NTGDI K LD E++ LY+
Sbjct: 68 GTDTQYVGKLH-TDQDKGDGNLKYILTGDGAGSLFIIDENTGDIHAAKKLDREEKSLYVL 126
Query: 172 RVFLISK 178
R I +
Sbjct: 127 RAKAIDR 133
>gi|332251712|ref|XP_003274990.1| PREDICTED: cadherin-6 [Nomascus leucogenys]
Length = 790
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 90/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 164 YTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKT 219
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 220 ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPE 279
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEK 165
G +GR+ A+DAD G+NA + YS+ + D+ + G I K LD+EK
Sbjct: 280 SSPPGTPIGRIKASDADVGENAEIEYSITDGEGLDMFDVITDQETQEGVITVKKLLDFEK 339
Query: 166 QQLYLERV 173
+++Y +V
Sbjct: 340 KKVYTLKV 347
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 207 YFSVESETGIIKTALLNMDRENREQY 232
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H+ D D G ++ Y + F+++ NTGDI+ K LD E++ +Y+
Sbjct: 68 GSDYQYVGKLHS-DQDRGDGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYIL 126
Query: 172 RVFLISK 178
R I++
Sbjct: 127 RAQAINR 133
Score = 35.8 bits (81), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 54/138 (39%), Gaps = 31/138 (22%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------- 68
L Y R+ ++ T+ V A D D+ + V+Y + D +TD FN+D
Sbjct: 386 LAYILQIREDAQINTTIGSVAAQDPDAAR-NPVKYSV-DRHTDMDRIFNIDSGNGSIFTS 443
Query: 69 ----------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
ATE P Q SS + I+V D+ND PEF F
Sbjct: 444 KLLDRETLLWHNITVIATEINNPKQ-----SSRIPLYIKVLDVNDNAPEFAEFYETFVCE 498
Query: 113 EGQDGLAVGRVHATDADE 130
+ + + +HA D D+
Sbjct: 499 KAKADQLIQTLHAVDKDD 516
>gi|114600892|ref|XP_517720.2| PREDICTED: cadherin-12 isoform 2 [Pan troglodytes]
Length = 794
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + +G ++QVKATD D +G V Y +L YF++DP T
Sbjct: 165 YVATVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQ----PYFSIDPKTGVIRT 220
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGL+ T VNI +TD+ND P F + VPE
Sbjct: 221 ALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPE 280
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYS-VPED----IPFVVDANT--GDIRTNKALDYEK 165
G A+GR+ A D D GQNA + Y+ VP D V D +T G I+ K LD+E
Sbjct: 281 SSPIGSAIGRIRAVDPDFGQNAEIEYNIVPGDGGNLFDIVTDEDTQEGVIKLKKPLDFET 340
Query: 166 QQLYLERV 173
++ Y +V
Sbjct: 341 KKAYTFKV 348
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE G V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKVQDINDNEPKFLDGPYVATVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQP 207
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F +D TG IRT +D E ++ Y
Sbjct: 208 YFSIDPKTGVIRTALPNMDREVKEQY 233
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 60/137 (43%), Gaps = 6/137 (4%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH-QGPIQDEGGLSSTATVNIRVTDIN 96
TD+D+ + + + LD T A F ++ + H G TATV I V D+
Sbjct: 320 VTDEDTQEGVIKLKKPLDFETKKAYTFKVEASNLHLDHRFHSAGPFKDTATVKISVLDV- 378
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY---YSVPEDIPFVVDANT 152
D+ P F Y V E G +G V A D D G +AV Y + D F +D N
Sbjct: 379 DEPPVFSKPLYTMEVYEDTPVGTIIGAVTAQDLDVGSSAVRYFIDWKSDGDSYFTIDGNE 438
Query: 153 GDIRTNKALDYEKQQLY 169
G I TN+ LD E Y
Sbjct: 439 GTIATNELLDRESTAQY 455
>gi|354479104|ref|XP_003501753.1| PREDICTED: cadherin-6 [Cricetulus griseus]
gi|344245509|gb|EGW01613.1| Cadherin-6 [Cricetulus griseus]
Length = 790
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 90/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 164 YTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKT 219
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 220 ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPE 279
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEK 165
G +GR+ A+DAD G+NA + YS+ + D+ + G I K LD+EK
Sbjct: 280 SSPPGTPIGRIKASDADVGENAEIEYSITDGEGQDMFDVITDQETQEGIITVKKLLDFEK 339
Query: 166 QQLYLERV 173
+++Y +V
Sbjct: 340 KKVYTLKV 347
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 207 YFSVESETGIIKTALLNMDRENREQY 232
Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H+ D D G ++ Y + F+++ NTGDI+ K LD E++ +Y+
Sbjct: 68 GSDYQYVGKLHS-DQDRGDGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYIL 126
Query: 172 RVFLISK 178
R +++
Sbjct: 127 RAQAVNR 133
Score = 36.2 bits (82), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 53/138 (38%), Gaps = 31/138 (22%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------- 68
L Y R+ ++ T+ V A D D+ + V+Y + D +TD FN+D
Sbjct: 386 LAYILQIREDAQINTTIGSVSAQDPDAAR-NPVKYSV-DRHTDMDRIFNIDSGNGSIFTS 443
Query: 69 ----------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
ATE P Q SS + I+V D+ND PEF F
Sbjct: 444 KLLDRETLLWHNITVIATEINNPKQ-----SSRVPLYIKVLDVNDNAPEFAEFYETFVCE 498
Query: 113 EGQDGLAVGRVHATDADE 130
+ + +HA D D+
Sbjct: 499 RAKADQLIQTLHAVDKDD 516
>gi|25453400|ref|NP_037059.1| cadherin-6 precursor [Rattus norvegicus]
gi|1705546|sp|P55280.1|CADH6_RAT RecName: Full=Cadherin-6; AltName: Full=Kidney cadherin;
Short=K-cadherin; Flags: Precursor
gi|435461|dbj|BAA04975.1| K-cadherin [Rattus norvegicus]
Length = 789
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 90/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 164 YTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKT 219
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 220 ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPE 279
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEK 165
G +GR+ A+DAD G+NA + YS+ + D+ + G I K LD+EK
Sbjct: 280 SSPPGTPIGRIKASDADVGENAEIEYSITDGEGHDMFDVITDQETQEGIITVKKLLDFEK 339
Query: 166 QQLYLERV 173
+++Y +V
Sbjct: 340 KRVYTLKV 347
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 207 YFSVESETGIIKTALLNMDRENREQY 232
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H+ D D G ++ Y + F+++ NTGDI+ K LD E++ +Y+
Sbjct: 68 GSDYQYVGKLHS-DQDRGDGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYIL 126
Query: 172 RVFLISK 178
R I++
Sbjct: 127 RAQAINR 133
>gi|793943|gb|AAB48539.1| Br-cadherin [Homo sapiens]
Length = 794
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + +G ++QVKATD D +G V Y +L YF++DP T
Sbjct: 165 YVATVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQ----PYFSIDPKTGVIRT 220
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGL+ T VNI +TD+ND P F + VPE
Sbjct: 221 ALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPE 280
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYS-VPED----IPFVVDANT--GDIRTNKALDYEK 165
G A+GR+ A D D GQNA + Y+ VP D V D +T G I+ K LD+E
Sbjct: 281 SSPIGSAIGRIRAVDPDFGQNAEIEYNIVPGDGGNLFDIVTDEDTQEGVIKLKKPLDFET 340
Query: 166 QQLYLERV 173
++ Y +V
Sbjct: 341 KKAYTFKV 348
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 60/137 (43%), Gaps = 6/137 (4%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH-QGPIQDEGGLSSTATVNIRVTDIN 96
TD+D+ + + + LD T A F +D + H G TATV I V D+
Sbjct: 320 VTDEDTQEGVIKLKKPLDFETKKAYTFKVDASNLHLDHRFHSAGPFKDTATVKISVLDV- 378
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY---YSVPEDIPFVVDANT 152
D+ P F Y V E G +G V A D D G +AV Y + D F +D N
Sbjct: 379 DEPPVFSKPLYTMEVYEDTPVGTIIGAVTAQDLDVGSSAVRYFIDWKSDGDSYFTIDGNE 438
Query: 153 GDIRTNKALDYEKQQLY 169
G I TN+ LD E Y
Sbjct: 439 GTIATNELLDRESTAQY 455
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE G V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKVQDINDNEPKFLDGPYVATVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQP 207
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F +D TG IRT +D E ++ Y
Sbjct: 208 YFSIDPKTGVIRTALPNMDREVKEQY 233
>gi|109076806|ref|XP_001082276.1| PREDICTED: cadherin-12-like [Macaca mulatta]
gi|355749838|gb|EHH54176.1| Brain cadherin [Macaca fascicularis]
Length = 794
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + +G ++QVKATD D +G V Y +L YF++DP T
Sbjct: 165 YVATVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQ----PYFSIDPKTGVIRT 220
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGL+ T VNI +TD+ND P F + VPE
Sbjct: 221 ALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPE 280
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYS-VPED----IPFVVDANT--GDIRTNKALDYEK 165
G A+GR+ A D D GQNA + Y+ VP D V D +T G I+ K LD+E
Sbjct: 281 SSPIGSAIGRIRAVDPDFGQNAEIEYNIVPGDGGNLFDIVTDEDTQEGVIKLKKPLDFET 340
Query: 166 QQLYLERV 173
++ Y +V
Sbjct: 341 KKAYTFKV 348
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE G V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKVQDINDNEPKFLDGPYVATVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQP 207
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F +D TG IRT +D E ++ Y
Sbjct: 208 YFSIDPKTGVIRTALPNMDREVKEQY 233
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 60/137 (43%), Gaps = 6/137 (4%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH-QGPIQDEGGLSSTATVNIRVTDIN 96
TD+D+ + + + LD T A F ++ + H G TATV I V D+
Sbjct: 320 VTDEDTQEGVIKLKKPLDFETKKAYTFKVEASNLHLDHRFHSAGPFKDTATVKISVLDV- 378
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY---YSVPEDIPFVVDANT 152
D+ P F Y V E G +G V A D D G +AV Y + D F +D N
Sbjct: 379 DEPPVFSKPLYTMEVYEDTPVGTIIGAVTAQDLDVGSSAVRYFIDWKSDGDSYFTIDGNE 438
Query: 153 GDIRTNKALDYEKQQLY 169
G I TN+ LD E Y
Sbjct: 439 GTIATNELLDRESTAQY 455
>gi|16445393|ref|NP_004052.2| cadherin-12 preproprotein [Homo sapiens]
gi|158937438|sp|P55289.2|CAD12_HUMAN RecName: Full=Cadherin-12; AltName: Full=Brain cadherin;
Short=BR-cadherin; AltName: Full=Neural type cadherin 2;
Short=N-cadherin 2; Flags: Precursor
gi|29126956|gb|AAH47608.1| Cadherin 12, type 2 (N-cadherin 2) [Homo sapiens]
gi|119631141|gb|EAX10736.1| cadherin 12, type 2 (N-cadherin 2), isoform CRA_c [Homo sapiens]
gi|189054555|dbj|BAG37328.1| unnamed protein product [Homo sapiens]
gi|190689985|gb|ACE86767.1| cadherin 12, type 2 (N-cadherin 2) protein [synthetic construct]
gi|190691357|gb|ACE87453.1| cadherin 12, type 2 (N-cadherin 2) protein [synthetic construct]
Length = 794
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + +G ++QVKATD D +G V Y +L YF++DP T
Sbjct: 165 YVATVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQ----PYFSIDPKTGVIRT 220
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGL+ T VNI +TD+ND P F + VPE
Sbjct: 221 ALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPE 280
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYS-VPED----IPFVVDANT--GDIRTNKALDYEK 165
G A+GR+ A D D GQNA + Y+ VP D V D +T G I+ K LD+E
Sbjct: 281 SSPIGSAIGRIRAVDPDFGQNAEIEYNIVPGDGGNLFDIVTDEDTQEGVIKLKKPLDFET 340
Query: 166 QQLYLERV 173
++ Y +V
Sbjct: 341 KKAYTFKV 348
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE G V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKVQDINDNEPKFLDGPYVATVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQP 207
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F +D TG IRT +D E ++ Y
Sbjct: 208 YFSIDPKTGVIRTALPNMDREVKEQY 233
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 60/137 (43%), Gaps = 6/137 (4%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH-QGPIQDEGGLSSTATVNIRVTDIN 96
TD+D+ + + + LD T A F ++ + H G TATV I V D+
Sbjct: 320 VTDEDTQEGVIKLKKPLDFETKKAYTFKVEASNLHLDHRFHSAGPFKDTATVKISVLDV- 378
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY---YSVPEDIPFVVDANT 152
D+ P F Y V E G +G V A D D G +AV Y + D F +D N
Sbjct: 379 DEPPVFSKPLYTMEVYEDTPVGTIIGAVTAQDLDVGSSAVRYFIDWKSDGDSYFTIDGNE 438
Query: 153 GDIRTNKALDYEKQQLY 169
G I TN+ LD E Y
Sbjct: 439 GTIATNELLDRESTAQY 455
>gi|506406|gb|AAA35623.1| cadherin-12 [Homo sapiens]
Length = 794
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + +G ++QVKATD D +G V Y +L YF++DP T
Sbjct: 165 YVATVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQ----PYFSIDPKTGVIRT 220
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGL+ T VNI +TD+ND P F + VPE
Sbjct: 221 ALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPE 280
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYS-VPED----IPFVVDANT--GDIRTNKALDYEK 165
G A+GR+ A D D GQNA + Y+ VP D V D +T G I+ K LD+E
Sbjct: 281 SSPIGSAIGRIRAVDPDFGQNAEIEYNIVPGDGGNLFDIVTDEDTQEGVIKLKKPLDFET 340
Query: 166 QQLYLERV 173
++ Y +V
Sbjct: 341 KKAYTFKV 348
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE G V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKVQDINDNEPKFLDGPYVATVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQP 207
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F +D TG IRT +D E ++ Y
Sbjct: 208 YFSIDPKTGVIRTALPNMDREVKEQY 233
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 59/137 (43%), Gaps = 6/137 (4%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH-QGPIQDEGGLSSTATVNIRVTDIN 96
TD+D+ + + + LD T A F ++ + H G TATV I V D+
Sbjct: 320 VTDEDTQEGVIKLKKPLDFETKKAYTFKVEASNLHLDHRFHSAGPFKDTATVKISVLDV- 378
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY---YSVPEDIPFVVDANT 152
D+ P F Y V E G +G V A D D G AV Y + D F +D N
Sbjct: 379 DEPPVFSKPLYTMEVYEDTPVGTIIGAVTAQDLDVGSGAVRYFIDWKSDGDSYFTIDGNE 438
Query: 153 GDIRTNKALDYEKQQLY 169
G I TN+ LD E Y
Sbjct: 439 GTIATNELLDRESTAQY 455
>gi|149027277|gb|EDL82944.1| rCG23692 [Rattus norvegicus]
Length = 790
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 90/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 164 YTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKT 219
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 220 ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPE 279
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEK 165
G +GR+ A+DAD G+NA + YS+ + D+ + G I K LD+EK
Sbjct: 280 SSPPGTPIGRIKASDADVGENAEIEYSITDGEGHDMFDVITDQETQEGIITVKKLLDFEK 339
Query: 166 QQLYLERV 173
+++Y +V
Sbjct: 340 KRVYTLKV 347
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 207 YFSVESETGIIKTALLNMDRENREQY 232
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H+ D D G ++ Y + F+++ NTGDI+ K LD E++ +Y+
Sbjct: 68 GSDYQYVGKLHS-DQDRGDGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYIL 126
Query: 172 RVFLISK 178
R I++
Sbjct: 127 RAQAINR 133
Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 54/138 (39%), Gaps = 31/138 (22%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------- 68
L Y R+ ++ T+ V A D D+ + V+Y + D +TD FN+D
Sbjct: 386 LAYILQIREDAQINTTIGSVAAQDPDAAR-NPVKYSV-DRHTDMDRIFNIDSGNGSIFTS 443
Query: 69 ----------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
ATE P Q SS + I+V D+ND PEF F
Sbjct: 444 KLLDRETLLWHNITVIATEINNPKQ-----SSRVPLYIKVLDVNDNAPEFAEFYETFVCE 498
Query: 113 EGQDGLAVGRVHATDADE 130
+ + + +HA D D+
Sbjct: 499 KAKADQLIQTLHAVDKDD 516
>gi|443694652|gb|ELT95736.1| hypothetical protein CAPTEDRAFT_182594 [Capitella teleta]
Length = 2682
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 82/165 (49%), Gaps = 21/165 (12%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-LDPATEHQGPI------------ 76
G +++VKATD D+G GLV Y + N Y N + + P+
Sbjct: 263 GPVILEVKATDADAGDNGLVRYSITGGNIQDTFYINDISGELSLRKPLDYERMNSYRLNV 322
Query: 77 --QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEG 131
QD G S++ TV +RV D+ND +P F + Y+ +V E G + RV A D+D G
Sbjct: 323 RAQDSGSPHRSNSTTVLVRVIDVNDNSPRFYTSLYQEAVLENVAVGYTIMRVQAYDSDSG 382
Query: 132 QNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
N+ + YS+ +D+P +D TG + T K LD EK + + RV
Sbjct: 383 LNSALVYSIHDAIDDLPIEIDTQTGALTTVKELDREKHERFSFRV 427
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 78/169 (46%), Gaps = 30/169 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------EH---- 72
+G T++ V+A+D+DSG G +EY +L N + FN+DP +H
Sbjct: 152 IGSTIITVRASDEDSGHNGEIEYSIL-NPSGPNEVFNIDPRVGSITTNKKLDREKHASYT 210
Query: 73 -QGPIQDEGGLSSTAT----VNIRVTDINDKNPEFQSLPYEFSVPEGQD---GLAVGRVH 124
Q D+ + T V I V D ND P+F Y V E D G + V
Sbjct: 211 LQVQASDKAMVIERKTEVVQVQINVLDENDNKPQFSQSSYTVDVREDVDIAGGPVILEVK 270
Query: 125 ATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ATDAD G N +V YS+ +D F ++ +G++ K LDYE+ Y
Sbjct: 271 ATDADAGDNGLVRYSITGGNIQDT-FYINDISGELSLRKPLDYERMNSY 318
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 73/167 (43%), Gaps = 24/167 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-- 76
Y + ++ LG ++ V A+D D+ + V Y + N A FN+ + QG I
Sbjct: 462 YSEIVSEEAMLGSPVVYVTASDADADEHSRVTYSITSGNDMNA--FNI-ISQMGQGLITV 518
Query: 77 ------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
D G L TATV I V+D N P FQ PY V E G
Sbjct: 519 ARPLNFKEKSRYILTVTASDPGNLVDTATVFINVSDANTYRPVFQETPYTVRVDEDTSVG 578
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYE 164
+ +V ATD D G NA + Y++ E F +D TG+I + LD E
Sbjct: 579 TTIFQVTATDLDSGDNARISYTMDESEMFAIDVETGEIFIKEGLDRE 625
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 76/170 (44%), Gaps = 27/170 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLL-DNNTDAASYFNLDP----------------ATEH 72
G T+ + A+D D G G + Y LL + + + F +DP AT H
Sbjct: 45 GFTIDTITASDPDEGDAGRLTYSLLATRDGRSQNMFTIDPSSGQLTTTQSLDRESIATHH 104
Query: 73 QGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
I + G S+ A++ I V DIND P F+ Y+ V E G + V A+D
Sbjct: 105 LQIIASDYGHPSQSAYASLIIYVDDINDHAPLFEQKSYQRDVTESSSIGSTIITVRASDE 164
Query: 129 DEGQNAVVYYSV-----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
D G N + YS+ P ++ F +D G I TNK LD EK Y +V
Sbjct: 165 DSGHNGEIEYSILNPSGPNEV-FNIDPRVGSITTNKKLDREKHASYTLQV 213
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 78/177 (44%), Gaps = 35/177 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGG------- 81
+G T+ QV ATD DSG + Y + D + F +D T G I + G
Sbjct: 577 VGTTIFQVTATDLDSGDNARISYTM-----DESEMFAIDVET---GEIFIKEGLDRELTP 628
Query: 82 ---LSSTAT------------VNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHA 125
LS TAT + I V DIND +P+F Y V E G ++ ++ A
Sbjct: 629 SYTLSVTATDHGRPSKADTTDIEITVADINDNDPKFLEPKYTGRVDEDAFVGTSILKISA 688
Query: 126 TDADEGQNAVVYYS----VPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
TDAD G N V Y+ D F +D G IRT ++LD EK Y R F + +
Sbjct: 689 TDADSGLNGRVRYTFEGGFSGDGHFSIDPTLGVIRTAESLDREKVASYELRAFAVDR 745
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 60/132 (45%), Gaps = 21/132 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-----------------ATE 71
+G +++++ ATD DSG G V Y + +F++DP + E
Sbjct: 679 VGTSILKISATDADSGLNGRVRY-TFEGGFSGDGHFSIDPTLGVIRTAESLDREKVASYE 737
Query: 72 HQGPIQDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+ D G + +V I +T DIND P+FQ + +PE G V V A D
Sbjct: 738 LRAFAVDRGSPERSVSVVISITLNDINDNAPQFQMSHLDLYIPENSPIGSEVDSVLAIDP 797
Query: 129 DEGQNAVVYYSV 140
DEG NA V YS+
Sbjct: 798 DEGVNAEVVYSI 809
Score = 42.4 bits (98), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 23/165 (13%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQG---- 74
+G T+M+V+A D DSG + Y + +D T A + +H+
Sbjct: 367 VGYTIMRVQAYDSDSGLNSALVYSIHDAIDDLPIEIDTQTGALTTVKELDREKHERFSFR 426
Query: 75 -PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPY-EFSVPEGQDGLAVGRVHATDADE 130
+D+G S+ A V I + D+ND NP F+ Y E E G V V A+DAD
Sbjct: 427 VEARDQGDPVRSANAGVEINIRDVNDNNPIFKPKVYSEIVSEEAMLGSPVVYVTASDADA 486
Query: 131 GQNAVVYYSVPED-----IPFVVDANTGDIRTNKALDYEKQQLYL 170
+++ V YS+ + G I + L+++++ Y+
Sbjct: 487 DEHSRVTYSITSGNDMNAFNIISQMGQGLITVARPLNFKEKSRYI 531
>gi|301607149|ref|XP_002933171.1| PREDICTED: cadherin-18-like [Xenopus (Silurana) tropicalis]
Length = 787
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 84/173 (48%), Gaps = 35/173 (20%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
E+G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 EIGTSVIQVTATDGDDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALPNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + T+N+ +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYTVVIQAKDMAGQVGGLSGSTTINVTLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-DIPFVV----DANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ D F + + G + K L+YEK++LY
Sbjct: 289 KIKANDADTGLNADIRYSITNGDGVFSISTDKETREGILMLKKPLNYEKKKLY 341
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND PEF PY +VPE + G +V +V ATD D+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPEFPDGPYIVTVPEMSEIGTSVIQVTATDGDDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALPNMDREAREHY 232
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 56/140 (40%), Gaps = 22/140 (15%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY + + G + V A D DS LV Y +DNN+ FN+D T
Sbjct: 385 FYEMEVYENAKAGTVVGTVTAHDPDSAN-SLVRY-FIDNNSQDQKEFNIDSNTGLITTTK 442
Query: 71 ---EHQGPIQD------EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
+ P + E G L S +V IRV D+ND NP + S G+ G
Sbjct: 443 HLDREENPWYNITVSASETGYPSLVSHVSVGIRVLDVND-NPPYISNEDIVVCENGRPGQ 501
Query: 119 AVGRVHATDADEGQNAVVYY 138
+ + A D D+ N +Y
Sbjct: 502 VIHTIKAIDKDDTANGARFY 521
>gi|73954381|ref|XP_546371.2| PREDICTED: cadherin-12 isoform 2 [Canis lupus familiaris]
Length = 794
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + +G ++QVKATD D +G V Y +L YF++DP T
Sbjct: 165 YVASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQ----PYFSIDPKTGVIRT 220
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGL+ T VNI +TD+ND P F + VPE
Sbjct: 221 ALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTVVNITLTDVNDNPPRFPKSIFHLKVPE 280
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYS-VPED----IPFVVDANT--GDIRTNKALDYEK 165
G A+GR+ A D D GQNA + Y+ VP D V D +T G I+ K LD+E
Sbjct: 281 SSPIGSAIGRIRAVDPDFGQNAEIEYNIVPGDGGNLFDIVTDEDTQEGVIKLKKPLDFET 340
Query: 166 QQLYLERV 173
++ Y +V
Sbjct: 341 KKAYTFKV 348
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY SVPE G V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKVQDINDNEPKFLDGPYVASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQP 207
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F +D TG IRT +D E ++ Y
Sbjct: 208 YFSIDPKTGVIRTALPNMDREVKEQY 233
>gi|327271397|ref|XP_003220474.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
[Anolis carolinensis]
Length = 2944
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 83/180 (46%), Gaps = 26/180 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y R+ E+G ++ V+ATD D+ + Y LL N F +DP +
Sbjct: 298 YKESMRENLEVGYEVLTVRATDGDASPNANILYHLL-NGRGVNKIFEIDPKSGVIRTNGL 356
Query: 71 -------------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QD 116
E +D G S+TAT++I V D ND +P+F Y VPE
Sbjct: 357 VDREAVESYQLIVEANDQGRDPGPRSTTATIHITVEDDNDNSPQFSEKRYVVQVPENVAS 416
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
V RV+ATD D+G NA+V+YS+ F +DA TG+I LDYE + Y R+
Sbjct: 417 NTHVLRVNATDRDKGSNALVHYSIMSGNTRGQFYIDAQTGNIDVVSQLDYEMNKEYSLRI 476
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 22/159 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYF-----NLDPATEHQGPIQDEGGLSSTAT 87
+++V ATD+D G LV Y ++ NT Y N+D ++ + E L A
Sbjct: 420 VLRVNATDRDKGSNALVHYSIMSGNTRGQFYIDAQTGNIDVVSQLDYEMNKEYSLRIRAQ 479
Query: 88 -------------VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
V I+V D+ND +P F S P++ +V E G +V + A DAD G+N
Sbjct: 480 DGGRPPLSNISGLVAIQVLDVNDNSPIFVSTPFQSTVLENVPVGYSVIHIQAIDADSGEN 539
Query: 134 AVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A + Y+ + D PF ++ NTG I LD E Y
Sbjct: 540 ARLEYALVDISSDFPFSINNNTGWILVASELDRENVDFY 578
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLD----PATEHQGP 75
+++QV ATD+DSG G V Y + + LD P E +
Sbjct: 835 SVLQVSATDRDSGLNGRVFYTFQGGDDGDGDFIIESTSGIVRTLRRLDRENVPLYELRAY 894
Query: 76 IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G + + V+I V D+ND P F+ ++ V E GL V R+ A+D DEG
Sbjct: 895 AVDKGVPAMRTPIEVHITVLDVNDNPPVFEQDEFDIFVEENSPIGLVVARITASDPDEGT 954
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 955 NAQIMYQIVEGNIPEVFQLDIFSGELTALMDLDYETKSEYV 995
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPED 143
TA V + VTD N P FQS Y ++ E + G V + ATD D G+NA + Y + +
Sbjct: 697 TAQVFVNVTDANTHRPVFQSSHYTVNINEDRPVGTTVVIISATDEDTGENARITYFMEDS 756
Query: 144 IP-FVVDANTGDIRTNKALDYEKQQLY 169
IP F +D +TG + T LDYE Q Y
Sbjct: 757 IPQFKIDMDTGAVTTQMDLDYEDQVSY 783
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 80/172 (46%), Gaps = 39/172 (22%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDP------------------ 68
G ++ +KA D D G++G ++Y L D+ ++ S+F +DP
Sbjct: 201 GTPVIMLKAVDPDEGEWGRLDYSMDALFDSRSN--SFFAIDPRSGAVTTAEELDRETKSS 258
Query: 69 ------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
AT+H P + ++ AT+++ V D ND +P F+ Y+ S+ E + G V
Sbjct: 259 HVFRVTATDHGVPRR-----TAMATLSVTVADTNDHDPVFEQQEYKESMRENLEVGYEVL 313
Query: 122 RVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
V ATD D NA + Y + + F +D +G IRTN +D E + Y
Sbjct: 314 TVRATDGDASPNANILYHLLNGRGVNKIFEIDPKSGVIRTNGLVDREAVESY 365
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 22/171 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL--------LDNNTDAASYFNLDPATEHQ-----GP 75
+G T++ + ATD+D+G+ + Y + +D +T A + +D E Q
Sbjct: 729 VGTTVVIISATDEDTGENARITYFMEDSIPQFKIDMDTGAVTT-QMDLDYEDQVSYTLAI 787
Query: 76 IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDADEG 131
+ G+ S T + I V D+ND P+F Y+ SV E +V +V ATD D G
Sbjct: 788 TARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDNYQGSVYEDVPAFTSVLQVSATDRDSG 847
Query: 132 QNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
N V+Y+ D F++++ +G +RT + LD E LY R + + K
Sbjct: 848 LNGRVFYTFQGGDDGDGDFIIESTSGIVRTLRRLDRENVPLYELRAYAVDK 898
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 35/170 (20%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLD----------NNT-----------DAASYFNLD 67
+G +++ ++A D DSG+ +EY L+D NNT + ++N
Sbjct: 522 VGYSVIHIQAIDADSGENARLEYALVDISSDFPFSINNNTGWILVASELDRENVDFYNFG 581
Query: 68 -PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHA 125
A +H P ++S+A+V+I + D+ND NPEF Y + E G +V V A
Sbjct: 582 VEARDHGNP-----PMTSSASVSITILDVNDNNPEFTQKEYSMRLNEDAAVGTSVLTVSA 636
Query: 126 TDADEGQNAVVYYSVPED-----IPFVVDANTGDIRTNKALDYEKQQLYL 170
D D N+V+ Y + + G I LDY+ ++ YL
Sbjct: 637 IDRD--VNSVITYQITNGNTRNRFSITSQSGGGLITLALPLDYKLERHYL 684
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPI- 76
+G+ + ++ A+D D G + Y++++ N + + +LD T+ + I
Sbjct: 938 IGLVVARITASDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTALMDLDYETKSEYVIV 997
Query: 77 --QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRVHA 125
L S ATV++R+ D ND P ++ F S P G +GR+ A
Sbjct: 998 VQATSAPLVSRATVHVRLRDKNDNIPILKNFEIIFNNYITNRSSSFPTG----VIGRIPA 1053
Query: 126 TDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEKQQLYLERVFLIS 177
+D D + ++ V ++ +TG++R ++ALD + LE V +S
Sbjct: 1054 SDPDVSDTLSYSFEQGNELKLVLLNHSTGELRLSRALDNNRP---LEAVMRVS 1103
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV------PEDIPFVVD 149
+ +P+FQ+ Y+ SVPE + G V + A D DEG+ + YS+ + F +D
Sbjct: 180 NASPQFQAPTYQVSVPENRPAGTPVIMLKAVDPDEGEWGRLDYSMDALFDSRSNSFFAID 239
Query: 150 ANTGDIRTNKALDYEKQQLYLERV 173
+G + T + LD E + ++ RV
Sbjct: 240 PRSGAVTTAEELDRETKSSHVFRV 263
>gi|301763347|ref|XP_002917094.1| PREDICTED: cadherin-9-like [Ailuropoda melanoleuca]
gi|281337371|gb|EFB12955.1| hypothetical protein PANDA_005264 [Ailuropoda melanoleuca]
Length = 789
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 88/189 (46%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + +G +++QV ATD D +G V Y +L YF++DP +
Sbjct: 163 LYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGIIK 218
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
++Q IQ + GGLS T TVNI +TD+N+ P F Y+F+ P
Sbjct: 219 TALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQFNSP 278
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYE 164
E G +GR+ A D D G+NA + YS+ E D+ D G I + LD+E
Sbjct: 279 ESVPLGTHLGRIKANDPDVGENAEMEYSIAEGDGADMFDVITDKDTQEGIITVKQNLDFE 338
Query: 165 KQQLYLERV 173
+ LY RV
Sbjct: 339 NKMLYTLRV 347
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPKFTKDLYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRT 157
F VD +G I+T
Sbjct: 207 YFSVDPESGIIKT 219
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G + Y + FV+D NTGDI K LD E++ LY+
Sbjct: 68 GTDTQYVGKLH-TDQDKGDGNLKYILTGDGAGSLFVIDENTGDIHAAKKLDREEKSLYIL 126
Query: 172 RVFLISK 178
R I +
Sbjct: 127 RAKAIDR 133
>gi|260788463|ref|XP_002589269.1| hypothetical protein BRAFLDRAFT_130073 [Branchiostoma floridae]
gi|229274445|gb|EEN45280.1| hypothetical protein BRAFLDRAFT_130073 [Branchiostoma floridae]
Length = 2821
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 80/162 (49%), Gaps = 26/162 (16%)
Query: 32 TLMQ-VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-------------- 76
T++Q V ATD D G + Y L+ N+ +F +D AT I
Sbjct: 566 TVIQTVAATDPDEGTNSQIRYSLIGGNSQG--HFTIDSATGDISVITNLDFESTPRYRLI 623
Query: 77 ---QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADE 130
QD G + S+ + + V D+ND +P+F S P+E SV E + G +V + A DAD
Sbjct: 624 VKAQDSGRPSMWSSVVLTVSVIDVNDHDPQFVSTPFETSVFEDVRVGFSVIHIQAIDADS 683
Query: 131 GQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G NA + YS VP +PF +D +TG I TN LD E +Y
Sbjct: 684 GSNAELTYSLANVPARMPFEIDGDTGWIVTNAELDREAHAIY 725
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 81/179 (45%), Gaps = 34/179 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL--DNNTDAASYFNLDPATEHQGPI 76
Y R+ G ++ Q+ ATD DSG G + Y DN DA F +D E G I
Sbjct: 968 YSGSVREDCSRGTSVTQISATDADSGTNGQIRYTFTGGDNGEDA---FVID---ERSGII 1021
Query: 77 --------------------QDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEG 114
+D+G V+I VT D+ND P+F S + VPE
Sbjct: 1022 RTDKRLDRELIPVYNLVAYAEDQGQPEQKTPVDIIVTIEDVNDNAPQFPSDTIDIYVPEN 1081
Query: 115 QD-GLAVGRVHATDADEGQNA-VVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+ G V R+ A D DEGQNA V+YY + P F +D +G++ T LDYE + Y
Sbjct: 1082 RVVGSVVARITANDPDEGQNAEVMYYITKGNNPELFQLDIFSGELVTLIDLDYEARNFY 1140
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 79/168 (47%), Gaps = 35/168 (20%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------EHQGPIQDE 79
+G T++ V ATD D G+ + Y + D + F ++P+T +H+ Q
Sbjct: 876 IGTTILVVSATDGDEGENARISYSM-----DILNAFEIEPSTGAIKTKQRLDHEA--QAS 928
Query: 80 GGLSSTAT------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHAT 126
+S TAT V+I V D+ND P F Y SV E G +V ++ AT
Sbjct: 929 FAVSVTATDHGVPSKFDESYVDIIVNDVNDNAPVFLLESYSGSVREDCSRGTSVTQISAT 988
Query: 127 DADEGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
DAD G N + Y+ ED FV+D +G IRT+K LD E +Y
Sbjct: 989 DADSGTNGQIRYTFTGGDNGED-AFVIDERSGIIRTDKRLDRELIPVY 1035
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 79/165 (47%), Gaps = 25/165 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT---------------EH- 72
G + V ATD D G+ G ++Y ++ N+ + F++DPA+ H
Sbjct: 351 GYVVTLVTATDPDPGEAGRLQYSMVALQNSRSQDLFSIDPASGEVTTQEVLDREDMNRHF 410
Query: 73 -QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+ +D G S+TAT+ I + D+ND +PEF+ Y +V EG + G V V ATD
Sbjct: 411 FRVTARDNGSPPRSATATLQIDILDMNDHDPEFEENSYREAVLEGIEIGSNVLTVRATDQ 470
Query: 129 DEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
D G N+ + YS+ + F + G I T +ALD E Y
Sbjct: 471 DIGPNSDIRYSIINPSGTNTAFQISRRDGVITTTEALDRETTASY 515
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
LS A V I +TD N P FQ PY V E G + V ATD DEG+NA + YS+
Sbjct: 841 LSDDAQVYINITDANTHRPVFQQSPYSVYVDEDVPIGTTILVVSATDGDEGENARISYSM 900
Query: 141 PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVF-----LISKFATSYL 184
F ++ +TG I+T + LD+E Q + V + SKF SY+
Sbjct: 901 DILNAFEIEPSTGAIKTKQRLDHEAQASFAVSVTATDHGVPSKFDESYV 949
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 73/164 (44%), Gaps = 22/164 (13%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFN-----------LDPAT----- 70
E+G ++ V+ATD+D G + Y +++ + T+ A + LD T
Sbjct: 457 EIGSNVLTVRATDQDIGPNSDIRYSIINPSGTNTAFQISRRDGVITTTEALDRETTASYR 516
Query: 71 -EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDA 128
E + Q +S V I V D ND P+F+ Y VPE + + V ATD
Sbjct: 517 LEVRASDQGTPPRTSDVVVTITVLDENDNEPQFEQQSYAKDVPENVRPDTVIQTVAATDP 576
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
DEG N+ + YS+ F +D+ TGDI LD+E Y
Sbjct: 577 DEGTNSQIRYSLIGGNSQGHFTIDSATGDISVITNLDFESTPRY 620
Score = 38.9 bits (89), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 53/129 (41%), Gaps = 34/129 (26%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRL-----------------------LDNNTDAASYF 64
+G +++ ++A D DSG + Y L LD A F
Sbjct: 668 RVGFSVIHIQAIDADSGSNAELTYSLANVPARMPFEIDGDTGWIVTNAELDREAHAIYDF 727
Query: 65 NLDPATEHQGPIQDEGGLSSTAT--VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
N+ A D+G + TA V+I + D+ND P F Y +VPE + G +V
Sbjct: 728 NVQAA--------DQGSPARTAAARVSINILDVNDNAPVFNPKVYYINVPEDANPGTSVL 779
Query: 122 RVHATDADE 130
V A DADE
Sbjct: 780 TVTANDADE 788
>gi|410949750|ref|XP_003981581.1| PREDICTED: cadherin-12 [Felis catus]
Length = 794
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + +G ++QVKATD D +G V Y +L YF++DP T
Sbjct: 165 YVASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQ----PYFSIDPKTGVIRT 220
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGL+ T VNI +TD+ND P F + VPE
Sbjct: 221 ALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPE 280
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYS-VPED----IPFVVDANT--GDIRTNKALDYEK 165
G A+GR+ A D D GQNA + Y+ VP D V D +T G I+ K LD+E
Sbjct: 281 SSPIGSAIGRIRAVDPDFGQNAEIEYNIVPGDGGNLFDIVTDEDTQEGVIKLKKPLDFET 340
Query: 166 QQLYLERV 173
++ Y +V
Sbjct: 341 KKAYTFKV 348
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY SVPE G V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKVQDINDNEPKFLDGPYVASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQP 207
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F +D TG IRT +D E ++ Y
Sbjct: 208 YFSIDPKTGVIRTALPNMDREVKEQY 233
>gi|410914104|ref|XP_003970528.1| PREDICTED: protocadherin-20-like [Takifugu rubripes]
Length = 859
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 89/181 (49%), Gaps = 26/181 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A++ + G+TL++V A D D G G V YRL N+T + F++DP T
Sbjct: 457 YQLEAQENNRPGMTLLRVSAWDVDDGHNGRVTYRL-GNHT--PTVFSIDPVTGQLSASAS 513
Query: 71 ---EHQGP------IQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
E QG +D G L S ATV+IRV D ND P F + + F VPE LA
Sbjct: 514 LDREQQGAHVITVFARDSGSPPLESVATVSIRVLDQNDNAPVFVTPHFIFFVPEDAPLLA 573
Query: 120 -VGRVHATDADEGQNA-VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
VG V TD DEG+N + PFVVD G + LD E +Q Y ++L++
Sbjct: 574 EVGAVSVTDPDEGENGDTEMFLKNSSGPFVVDRTKGILHITTHLDRETEQRY--ELYLLA 631
Query: 178 K 178
+
Sbjct: 632 R 632
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 27/175 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYF-------------NLDPATEHQGPIQ-- 77
L+ V+A DKD+G+ G V YRL D + F +D T I+
Sbjct: 147 LLDVQAQDKDAGRNGEVHYRLEDPDGVFGLTFLGDGPVVALVVQTAIDRETRDFYEIKLE 206
Query: 78 --DEGG--LSSTATVNIRVTDINDKNPEFQSL-PYEFSVP-EGQDGLAVGRVHATDADEG 131
D G LS+TAT+ + VTD++D P F P ++P + + V +V A D D G
Sbjct: 207 AIDRGSDPLSATATLIVTVTDVDDNCPSFSPAGPRSVAIPGDSPRNMLVAQVRAIDPDSG 266
Query: 132 QNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
NA + YS+ + F +D+ TGDIR + L + + L +V S+
Sbjct: 267 PNAAIIYSLSPKVSERAKKLFSLDSLTGDIRLAQDLQSDNSEELLLKVLASSQHC 321
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP--F 146
+ V D+ND P F Y+ E + G+ + RV A D D+G N V Y + P F
Sbjct: 440 VMVADVNDNAPIFPESHYQLEAQENNRPGMTLLRVSAWDVDDGHNGRVTYRLGNHTPTVF 499
Query: 147 VVDANTGDIRTNKALDYEKQQLYLERVF 174
+D TG + + +LD E+Q ++ VF
Sbjct: 500 SIDPVTGQLSASASLDREQQGAHVITVF 527
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 14/109 (12%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYE----FSVPEGQ-DGLAVGRVHATDADEGQNAV 135
L+STA V I V D+ND NP LP +VP G G V R++A D D G N+
Sbjct: 639 ALTSTARVTIFVEDVND-NPPRVILPSSNSSCLTVPTGTIAGTVVTRIYAMDEDSGLNSE 697
Query: 136 VYYSVPEDI------PFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
+ Y++ PF VD+ +G+I + L ++ L + +F++ +
Sbjct: 698 ITYTLVASKPAQSTGPFKVDSRSGNITITERL--LQKDLGMHHLFIVVR 744
>gi|410908209|ref|XP_003967583.1| PREDICTED: neural-cadherin-like [Takifugu rubripes]
Length = 2990
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 86/185 (46%), Gaps = 31/185 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------- 68
S Y A + ++G++++QV A DKD G G + Y+LL +++ S F +DP
Sbjct: 1166 SSIYEASVTEGAQIGMSVLQVSAHDKDLGLNGQITYKLLSDSSGDHSLFRIDPELGIIYT 1225
Query: 69 --------------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYE 108
+ E P +++ S TA V + ++D+ND P F YE
Sbjct: 1226 EAVFDREARSSYLLEVQSEDSQESARPGKNKQPNSDTAYVRVFISDVNDNKPVFAQRLYE 1285
Query: 109 FSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
V E D GLAV V ATD DEG NA + Y + F ++ G I + LDYE
Sbjct: 1286 VGVDENADVGLAVVTVSATDEDEGANAKLRYQITSGNKGGVFDIEPEVGTIFVAQPLDYE 1345
Query: 165 KQQLY 169
+Q+ +
Sbjct: 1346 QQKRF 1350
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 83/177 (46%), Gaps = 32/177 (18%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI---- 76
A+ + G ++QV+A D D G G V+Y L+ ++ A F + P T G I
Sbjct: 853 ALVLENQPTGTFVLQVRAVDADEGANGKVKYGLMHRDS-AMPAFRIHPDT---GAIVTAR 908
Query: 77 ------QDEGGLSSTAT------------VNIRVTDINDKNPEFQSLPYEFSVPEGQ-DG 117
Q E ++ TAT + +++ D ND +P+F++L YE+ + E G
Sbjct: 909 RFDRERQREYSVTVTATDWAEEPLIGICQLTVQILDQNDNSPKFENLRYEYFLREDTLVG 968
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIPFVVDAN--TGDIRTNKALDYEKQQLYLER 172
+ RV A D D G NA + YS+ D P + N TG + N+ + Q+ Y+ R
Sbjct: 969 TSFLRVAAHDDDFGTNAAITYSMSLDQPEYLRVNPVTGWVYVNQPI---SQRTYITR 1022
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV 140
L++ TV + +TD+ND P F S YE SV EG Q G++V +V A D D G N + Y +
Sbjct: 1144 LAAFTTVYVNITDVNDNVPFFTSSIYEASVTEGAQIGMSVLQVSAHDKDLGLNGQITYKL 1203
Query: 141 PEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERV 173
D F +D G I T D E + YL V
Sbjct: 1204 LSDSSGDHSLFRIDPELGIIYTEAVFDREARSSYLLEV 1241
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 31/167 (18%)
Query: 30 GVTLMQVKATDKDSGKFG---LVEYRLLDN--NTDAASYFNLDPAT-------------- 70
G+ ++++ A D D G ++ YR+ +N N F +D +T
Sbjct: 1506 GMLVVEMTAVDLDDAAVGQNAILTYRITENAHNIHKEDLFTIDSSTGTISVAAEGLDREF 1565
Query: 71 --EHQGPIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHA 125
H+ ++ D GG++ TATV I VTDIND P+F V E + +V + A
Sbjct: 1566 ANTHRVVVEASDGGGMTGTATVTIAVTDINDHTPKFLEDWCGARVSENTEKDSSVLELRA 1625
Query: 126 TDADEGQNAVVYYSVPE---DIPFVVDAN----TGDIRTNKALDYEK 165
D D G + +SV + F + +N TG +R + LD+EK
Sbjct: 1626 VDPDTGTYGQLTFSVLAGDLEQRFYIVSNRQEQTGILRLREKLDFEK 1672
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 66/137 (48%), Gaps = 14/137 (10%)
Query: 42 DSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPE 101
++G+ L R LD +D Y + A+E D LS+ A V + +TD ND PE
Sbjct: 582 ETGEISLT--RTLDYESDQRRYLLMVRASE------DSSSLSAAAEVQVLITDENDCVPE 633
Query: 102 F-QSLPYEFSVPEG-QDGLAVGRVHATDADEGQNA-VVYYSVPEDIPFVVDANTGDIRTN 158
F QS+ VPE ++ +V ATD D G NA + YY++ D F + + G I
Sbjct: 634 FLQSIYSVDGVPETVTTATSLLQVLATDCDSGSNAELTYYTLSPD--FSISPH-GTIFPA 690
Query: 159 KALDYEKQQLYLERVFL 175
LDYE+ E V +
Sbjct: 691 GRLDYERPNHLYEFVVM 707
Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 27/173 (15%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL-----------DNNTDAASYFNL 66
+ GA + E ++++++A D D+G +G + + +L N + L
Sbjct: 1605 WCGARVSENTEKDSSVLELRAVDPDTGTYGQLTFSVLAGDLEQRFYIVSNRQEQTGILRL 1664
Query: 67 DPATEHQGPIQ---------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFS-VPEGQD 116
+ + P + ++ SS I+V D ND PEF S + S +PE
Sbjct: 1665 REKLDFEKPAEQGFNLTIKVEDSDFSSVIHCTIQVEDENDNAPEFASSSHLLSPLPEDTP 1724
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV-PEDIP---FVVDANTGDIRTNKALDYE 164
G ++ +V ATD D G N + S+ P+ P F V + G + + LD E
Sbjct: 1725 VGTSIIQVVATDTDSGLNGEILCSILPQSDPHGHFAV-SRAGLVTVARPLDRE 1776
Score = 42.4 bits (98), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEF---QSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVY 137
L STA V + V D+N+ P F Q + V E Q G V +V A DADEG N V
Sbjct: 823 LFSTARVIVGVDDVNNNKPVFEECQQYCEQALVLENQPTGTFVLQVRAVDADEGANGKVK 882
Query: 138 YSVPED---IP-FVVDANTGDIRTNKALDYEKQQLY 169
Y + +P F + +TG I T + D E+Q+ Y
Sbjct: 883 YGLMHRDSAMPAFRIHPDTGAIVTARRFDRERQREY 918
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 20/142 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA--TEHQGP--------IQDEGG 81
+L+QV ATD DSG + Y L + + + + PA +++ P + +GG
Sbjct: 653 SLLQVLATDCDSGSNAELTYYTLSPDFSISPHGTIFPAGRLDYERPNHLYEFVVMATDGG 712
Query: 82 ---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE--GQDGLAVGRVHATDADEGQNAVV 136
S T TV +R+ +IND+ PEF Y V E G + L V V A D D + ++
Sbjct: 713 NEPHSGTTTVRVRMANINDEAPEFSQPVYRTFVSEDAGPNTL-VATVLAKDPD--GDGII 769
Query: 137 YYSVP--EDIPFVVDANTGDIR 156
Y E+ FV+D+ G IR
Sbjct: 770 YSITAGNEEGNFVIDSQKGLIR 791
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 24/164 (14%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPI 76
++G+ ++ V ATD+D G + Y++ N F+++P E Q
Sbjct: 1293 DVGLAVVTVSATDEDEGANAKLRYQITSGN--KGGVFDIEPEVGTIFVAQPLDYEQQKRF 1350
Query: 77 Q-----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG--LAVGRVHATDAD 129
+ +G A V + V + ND+ P F Y SV E DG + V +V ATD D
Sbjct: 1351 KLLVLASDGKWEDYAAVVVTVVNKNDEAPVFSMNEYYGSVTEELDGSPVFVLQVTATDPD 1410
Query: 130 -EGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ + YS+ + FV++ TG++ + +D E++ ++
Sbjct: 1411 KDADQGAIRYSIHGQGAESHFVINDITGEMYAQRTMDREERAVW 1454
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 22/134 (16%)
Query: 64 FNLDPATEHQGPI---QDEGGLSSTAT-------------VNIRVTDINDKNPEFQSLPY 107
++L PA E P+ D GL + V +++TD+ND PE+ PY
Sbjct: 378 YDLPPAKEDSSPVYLHSDSSGLQTPLAALSLLRPDWYLNKVRLKITDVNDNIPEWDMKPY 437
Query: 108 EFSV---PEGQDGLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALD 162
+ E G V ++ A DADEG++ V + + + D F V+ +G + + L+
Sbjct: 438 PYLAVVSHEAPAGTFVYQLQAHDADEGRSGEVEFFLSDGGDGCFSVEKKSGQV-VSTGLE 496
Query: 163 YEKQQLYLERVFLI 176
++ + YL V +
Sbjct: 497 LQRDREYLLSVVAL 510
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 75/171 (43%), Gaps = 35/171 (20%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDS-GKFGLVEYRLLDNNTDAASYFNLDPAT------ 70
+YG++ + V ++QV ATD D G + Y + + A S+F ++ T
Sbjct: 1386 YYGSVTEELDGSPVFVLQVTATDPDKDADQGAIRYSI--HGQGAESHFVINDITGEMYAQ 1443
Query: 71 -----EHQGPIQ-------DEG-GLSSTATVNIRVTDINDKNPEFQSLP--YEFSVPEGQ 115
E + + +EG GL+ V I V DIND P F P SV E
Sbjct: 1444 RTMDREERAVWRFVVMATDEEGEGLTGFTDVIINVWDINDNAPTFTCAPDNCHSSVAENS 1503
Query: 116 -DGLAVGRVHATDADE---GQNAVVYYSVPEDIP-------FVVDANTGDI 155
G+ V + A D D+ GQNA++ Y + E+ F +D++TG I
Sbjct: 1504 APGMLVVEMTAVDLDDAAVGQNAILTYRITENAHNIHKEDLFTIDSSTGTI 1554
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDADEGQNAVV 136
E G+S+ A V + V D ND P F L + R+ A DAD G NAV+
Sbjct: 96 ESGVSAVALVKVDVLDTNDHEPTFGVANRVHITLNDTTALRSVIYRLEADDADSGNNAVL 155
Query: 137 -YYSVPEDIPFVVDANTGDI 155
Y S P++ F V TG++
Sbjct: 156 TYTSAPKNGSFYVVPKTGEV 175
Score = 36.2 bits (82), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 68/171 (39%), Gaps = 26/171 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY-----------FNLD 67
Y A+ + G + Q++A D D G+ G VE+ L D S L
Sbjct: 439 YLAVVSHEAPAGTFVYQLQAHDADEGRSGEVEFFLSDGGDGCFSVEKKSGQVVSTGLELQ 498
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV----PEGQDGLAVGRV 123
E+ + GL +T + + P+F + Y S+ PEGQ L V +
Sbjct: 499 RDREYLLSVVALDGLGGRSTPAMLSVVAGARAPQFTNASYAISIPENTPEGQPFLVVYAI 558
Query: 124 HATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEK-QQLYL 170
Q + YS+ P + F + + TG+I + LDYE Q+ YL
Sbjct: 559 SF------QKQPISYSLVINPSSL-FSIRSETGEISLTRTLDYESDQRRYL 602
>gi|348555724|ref|XP_003463673.1| PREDICTED: cadherin-12-like [Cavia porcellus]
Length = 794
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + +G ++QVKATD D +G V Y +L YF++DP T
Sbjct: 165 YVASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQ----PYFSIDPKTGIIRT 220
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGL+ T VNI +TD+ND P F + VPE
Sbjct: 221 ALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPE 280
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYS-VPED----IPFVVDANT--GDIRTNKALDYEK 165
G A+GR+ A D D GQNA + Y+ VP D V D +T G I+ K LD+E
Sbjct: 281 SSPIGSAIGRIRAVDPDFGQNAEIEYNIVPGDGGNLFDIVTDEDTQEGVIKLKKPLDFET 340
Query: 166 QQLYLERV 173
++ Y +V
Sbjct: 341 KKAYTFKV 348
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY SVPE G V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKVQDINDNEPKFLDGPYVASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQP 207
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F +D TG IRT +D E ++ Y
Sbjct: 208 YFSIDPKTGIIRTALPNMDREVKEQY 233
>gi|332688250|ref|NP_001193887.1| cadherin-12 precursor [Bos taurus]
gi|296475699|tpg|DAA17814.1| TPA: cadherin 12, type 2 (N-cadherin 2) [Bos taurus]
Length = 794
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + +G ++QVKATD D +G V Y +L YF++DP T
Sbjct: 165 YIASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQ----PYFSIDPKTGVIRT 220
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGL+ T VNI +TD+ND P F + VPE
Sbjct: 221 ALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPE 280
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYS-VPED----IPFVVDANT--GDIRTNKALDYEK 165
G A+GR+ A D D GQNA + Y+ VP D V D +T G I+ K LD+E
Sbjct: 281 SSPVGSAIGRIRAVDPDFGQNAEIEYNIVPGDGGNLFDIVTDEDTQEGVIKLKKPLDFET 340
Query: 166 QQLYLERV 173
++ Y +V
Sbjct: 341 KKAYTFKV 348
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY SVPE G V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKVQDINDNEPKFLDGPYIASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQP 207
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F +D TG IRT +D E ++ Y
Sbjct: 208 YFSIDPKTGVIRTALPNMDREVKEQY 233
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 60/137 (43%), Gaps = 6/137 (4%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH-QGPIQDEGGLSSTATVNIRVTDIN 96
TD+D+ + + + LD T A F ++ + H G TATV I V D+
Sbjct: 320 VTDEDTQEGVIKLKKPLDFETKKAYTFKVEASNVHLDHRFHSAGPFKDTATVKISVLDV- 378
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY---YSVPEDIPFVVDANT 152
D+ P F Y V E G +G V A D D G +AV Y + D F +DA
Sbjct: 379 DEPPVFSKPLYTMEVYEDTPVGTIIGAVTAQDLDVGSSAVRYLIDWKSDGDSYFTIDATE 438
Query: 153 GDIRTNKALDYEKQQLY 169
G I TN+ LD E Y
Sbjct: 439 GTIATNELLDRESTAQY 455
>gi|149412791|ref|XP_001507184.1| PREDICTED: cadherin-12 [Ornithorhynchus anatinus]
Length = 794
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + +G ++QVKA D D +G V Y +L YF++DP T
Sbjct: 165 YVASVPEMSPVGAYVLQVKAMDADDPTYGNSARVVYSILQ----GQPYFSIDPKTGVIRT 220
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGL+ T TVNI +TD+ND P F + VPE
Sbjct: 221 ALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTTVNITLTDVNDNPPRFPKSIFHLKVPE 280
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYS-VPED----IPFVVDANT--GDIRTNKALDYEK 165
G A+GR+ A D D G+NA + Y+ VP D + D NT G I+ K LD+E
Sbjct: 281 SSPVGSAIGRIRAVDPDLGKNAEIEYNIVPGDGGNLFDIITDENTQEGVIKLKKPLDFET 340
Query: 166 QQLYLERV 173
++ Y +V
Sbjct: 341 KKAYTFKV 348
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY SVPE G V +V A DAD+ G +A V YS+ + P
Sbjct: 148 IKVQDINDNEPKFLDGPYVASVPEMSPVGAYVLQVKAMDADDPTYGNSARVVYSILQGQP 207
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F +D TG IRT +D E ++ Y
Sbjct: 208 YFSIDPKTGVIRTALPNMDREVKEQY 233
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 70/179 (39%), Gaps = 45/179 (25%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL---------------------------LDNNTDAA 61
+G + +++A D D GK +EY + LD T A
Sbjct: 284 VGSAIGRIRAVDPDLGKNAEIEYNIVPGDGGNLFDIITDENTQEGVIKLKKPLDFETKKA 343
Query: 62 SYFNLDPATEHQ-------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
F ++ + H GP +D TATV I V D+ ++ P F Y V E
Sbjct: 344 YTFKVEASNLHLDHRFLSVGPFKD------TATVKISVLDV-EEPPVFSKGLYTMEVYED 396
Query: 115 QD-GLAVGRVHATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G +G V A D D G +AV Y + D F +DA G I TN+ LD E Y
Sbjct: 397 TPVGTIIGAVTAQDLDLGSSAVRYFLDWKNDGDSYFTIDATEGTIATNELLDRESASQY 455
>gi|73953934|ref|XP_546363.2| PREDICTED: cadherin-9 isoform 1 [Canis lupus familiaris]
Length = 789
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 88/189 (46%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + +G +++QV ATD D +G V Y +L YF++DP +
Sbjct: 163 LYTASVPEMSGVGTSVIQVTATDADDAHYGNSAKVVYSILQ----GQPYFSVDPESGIIK 218
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
++Q IQ + GGLS T TVNI +TD+N+ P F Y+F P
Sbjct: 219 TALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQFHSP 278
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPED-----IPFVVDANT--GDIRTNKALDYE 164
E G +GR+ A D D G+NA + YS+ E + D NT G I + LD+E
Sbjct: 279 ESVPLGTHLGRIKANDPDVGENAEMEYSIAEGDGADMFDVITDKNTQEGIITVKQNLDFE 338
Query: 165 KQQLYLERV 173
+ LY RV
Sbjct: 339 NKMLYTLRV 347
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPKFTKDLYTASVPEMSGVGTSVIQVTATDADDAHYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRT 157
F VD +G I+T
Sbjct: 207 YFSVDPESGIIKT 219
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G + Y + FV+D NTGDI K LD E++ LY+
Sbjct: 68 GTDTQYVGKLH-TDQDKGDGNLKYILTGDGAGSLFVIDENTGDIHAAKKLDREEKSLYIL 126
Query: 172 RVFLISK 178
R I +
Sbjct: 127 RAKAIDR 133
>gi|348503353|ref|XP_003439229.1| PREDICTED: cadherin-6-like [Oreochromis niloticus]
Length = 782
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 90/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G +++QV A D D +G V Y +L+ YF++DP T
Sbjct: 152 YMARVPEMSDIGTSVIQVTAIDADDATYGNSAKVVYSILE----GQPYFSVDPETGLIKT 207
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
+Q IQ + GGLS T TV+I ++D+ND P F YEF VPE
Sbjct: 208 ALPGMDREVKENYQVVIQAKDMAGQMGGLSGTTTVSITLSDVNDNPPRFTKTLYEFRVPE 267
Query: 114 GQD-GLAVGRVHATDADEGQNAVV-YYSVPEDIPFVVDANT------GDIRTNKALDYEK 165
+ G AVG + A D D GQNA + Y + D P + + T G I K LDYE+
Sbjct: 268 SIELGSAVGVIRAMDVDIGQNAEMDYRIIGSDGPGMFEITTNRSTQEGVILLRKPLDYER 327
Query: 166 QQLYLERV 173
++ Y RV
Sbjct: 328 KRQYSLRV 335
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F PY VPE D G +V +V A DAD+ G +A V YS+ E P
Sbjct: 135 IKIHDINDNEPRFTKDPYMARVPEMSDIGTSVIQVTAIDADDATYGNSAKVVYSILEGQP 194
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG I+T +D E ++ Y
Sbjct: 195 YFSVDPETGLIKTALPGMDREVKENY 220
>gi|126320872|ref|XP_001364635.1| PREDICTED: cadherin-12 [Monodelphis domestica]
Length = 794
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 90/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + +G ++QVKATD D +G V Y +L YF++DP T
Sbjct: 165 YVASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQ----PYFSIDPKTGIIRT 220
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGL+ T TVNI +TD+ND P F + VPE
Sbjct: 221 ALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTTVNITLTDVNDNPPRFPKSIFHLKVPE 280
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYS-VPED----IPFVVDANT--GDIRTNKALDYEK 165
G A+GR+ A D D G+NA + Y+ VP D V D +T G I+ K LD+E
Sbjct: 281 SSLVGSAIGRIRAVDPDFGKNAEIEYNIVPGDGGNLFDIVTDEDTQEGVIKLKKPLDFET 340
Query: 166 QQLYLERV 173
++ Y +V
Sbjct: 341 KKAYTFKV 348
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY SVPE G V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKVQDINDNEPKFLDGPYVASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQP 207
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F +D TG IRT +D E ++ Y
Sbjct: 208 YFSIDPKTGIIRTALPNMDREVKEQY 233
>gi|426246690|ref|XP_004017125.1| PREDICTED: cadherin-12 [Ovis aries]
Length = 794
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + +G ++QVKATD D +G V Y +L YF++DP T
Sbjct: 165 YIASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQ----GQPYFSIDPKTGVIRT 220
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGL+ T VNI +TD+ND P F + VPE
Sbjct: 221 ALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPE 280
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYS-VPED----IPFVVDANT--GDIRTNKALDYEK 165
G A+GR+ A D D GQNA + Y+ VP D V D +T G I+ K LD+E
Sbjct: 281 SSPVGSAIGRIRAVDPDFGQNAEIEYNIVPGDGGNLFDIVTDEDTQEGVIKLKKPLDFET 340
Query: 166 QQLYLERV 173
++ Y +V
Sbjct: 341 KKAYTFKV 348
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY SVPE G V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKVQDINDNEPKFLDGPYIASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQP 207
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F +D TG IRT +D E ++ Y
Sbjct: 208 YFSIDPKTGVIRTALPNMDREVKEQY 233
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 60/137 (43%), Gaps = 6/137 (4%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH-QGPIQDEGGLSSTATVNIRVTDIN 96
TD+D+ + + + LD T A F ++ + H G TATV I V D+
Sbjct: 320 VTDEDTQEGVIKLKKPLDFETKKAYTFKVEASNVHLDHRFHSAGPFKDTATVKISVLDV- 378
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY---YSVPEDIPFVVDANT 152
D+ P F Y V E G +G V A D D G +AV Y + D F +DA
Sbjct: 379 DEPPVFSKPLYTMEVYEDTPVGTIIGAVTAQDLDVGSSAVRYLIDWKSDGDSYFTIDATE 438
Query: 153 GDIRTNKALDYEKQQLY 169
G I TN+ LD E Y
Sbjct: 439 GTIATNELLDRESTAQY 455
>gi|402871235|ref|XP_003899579.1| PREDICTED: cadherin-9 [Papio anubis]
Length = 789
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 87/189 (46%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + +G +++QV ATD D +G V Y +L YF++DP +
Sbjct: 163 LYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGIIK 218
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
++Q IQ + GGLS T TVNI +TD+N+ P F Y+F+ P
Sbjct: 219 TALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQFNSP 278
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYE 164
E G +GR+ A D D G+NA + Y + E D+ D G I + LD+E
Sbjct: 279 ESVPLGTHLGRIKANDPDVGENAEMEYRIAEGDGADMFDVITDKDTQEGIITVKQNLDFE 338
Query: 165 KQQLYLERV 173
Q LY RV
Sbjct: 339 NQMLYTLRV 347
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPKFTKDLYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRT 157
F VD +G I+T
Sbjct: 207 YFSVDPESGIIKT 219
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G + Y + FV+D NTGDI K LD E++ LY+
Sbjct: 68 GTDTQYVGKLH-TDQDKGDGNLKYILTGDGAGSLFVIDENTGDIHAAKKLDREEKSLYIL 126
Query: 172 RVFLISK 178
R I +
Sbjct: 127 RAKAIDR 133
>gi|355691237|gb|EHH26422.1| Cadherin-9 [Macaca mulatta]
gi|355749841|gb|EHH54179.1| Cadherin-9 [Macaca fascicularis]
gi|380787565|gb|AFE65658.1| cadherin-9 preproprotein [Macaca mulatta]
Length = 789
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 87/189 (46%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + +G +++QV ATD D +G V Y +L YF++DP +
Sbjct: 163 LYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGIIK 218
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
++Q IQ + GGLS T TVNI +TD+N+ P F Y+F+ P
Sbjct: 219 TALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQFNSP 278
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYE 164
E G +GR+ A D D G+NA + Y + E D+ D G I + LD+E
Sbjct: 279 ESVPLGTHLGRIKANDPDVGENAEMEYRIAEGDGADMFDVITDKDTQEGIITVKQNLDFE 338
Query: 165 KQQLYLERV 173
Q LY RV
Sbjct: 339 NQMLYTLRV 347
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPKFTKDLYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRT 157
F VD +G I+T
Sbjct: 207 YFSVDPESGIIKT 219
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G + Y + FV+D NTGDI K LD E++ LY+
Sbjct: 68 GTDTQYVGKLH-TDQDKGDGNLKYILTGDGAGSLFVIDENTGDIHAAKKLDREEKSLYIL 126
Query: 172 RVFLISK 178
R I +
Sbjct: 127 RAKAIDR 133
>gi|47551319|ref|NP_999838.1| cadherin-10 precursor [Gallus gallus]
gi|3023428|sp|P79995.1|CAD10_CHICK RecName: Full=Cadherin-10; Flags: Precursor
gi|1841296|dbj|BAA19130.1| cadherin-10 [Gallus gallus]
Length = 789
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 164 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARIIYSILQGQPYFSVEPETGIIRTAL 222
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F +PE
Sbjct: 223 PNMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTIHLRIPESS 282
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G +G + ATDAD G+NA V Y + + DI D G I K LDYE ++
Sbjct: 283 PVGTPIGSIKATDADTGKNAEVEYRIIDGDGTDMFDIVTQRDTQEGIITVRKPLDYETRR 342
Query: 168 LYLERV 173
LY +V
Sbjct: 343 LYTLKV 348
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A + YS+ + P
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARIIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|291395174|ref|XP_002714126.1| PREDICTED: cadherin 12, type 2 [Oryctolagus cuniculus]
Length = 794
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 88/188 (46%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + +G ++QVKATD D +G V Y +L YF++DP T
Sbjct: 165 YVASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQ----PYFSIDPKTGVIRT 220
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGL+ T VNI +TD+ND P F + VPE
Sbjct: 221 ALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPE 280
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYS-VPED----IPFVVDANT--GDIRTNKALDYEK 165
G AVGR+ A D D GQNA + Y+ VP D + D T G I+ K LD+E
Sbjct: 281 SSPVGSAVGRIRAVDPDFGQNAEIEYNIVPGDGGNLFDIITDEETQEGVIKLKKPLDFET 340
Query: 166 QQLYLERV 173
++ Y +V
Sbjct: 341 KKAYTFKV 348
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P F PY SVPE G V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKVQDINDNEPRFLDGPYVASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQP 207
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F +D TG IRT +D E ++ Y
Sbjct: 208 YFSIDPKTGVIRTALPNMDREVKEQY 233
>gi|296475702|tpg|DAA17817.1| TPA: cadherin 9, type 2 (T1-cadherin) [Bos taurus]
Length = 704
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 87/189 (46%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + +G +++QV ATD D +G V Y +L YF++DP +
Sbjct: 149 LYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGIIK 204
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
++Q IQ + GGLS T TVNI +TD+N+ P F Y+F P
Sbjct: 205 TALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQFHSP 264
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYE 164
E G +GR+ A D D G+NA V YS+ E D+ D G I + LD+E
Sbjct: 265 ESVPLGTPLGRIKANDPDVGENAEVEYSIAEGDGADMFDVITDKDTQEGIITVKQNLDFE 324
Query: 165 KQQLYLERV 173
+ LY +V
Sbjct: 325 NKMLYTLKV 333
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 133 IKIHDINDNEPKFTKDLYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQP 192
Query: 146 -FVVDANTGDIRT 157
F VD +G I+T
Sbjct: 193 YFSVDPESGIIKT 205
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G + Y + FV+D NTGDI K LD E++ LY+
Sbjct: 54 GTDTQYVGKLH-TDQDKGDGNLKYILTGDGAGSLFVIDENTGDIHAAKKLDREEKSLYVL 112
Query: 172 RVFLISK 178
R I +
Sbjct: 113 RAKAIDR 119
>gi|350594182|ref|XP_003133907.3| PREDICTED: cadherin-12 [Sus scrofa]
Length = 794
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + +G ++QVKATD D +G V Y +L YF++DP T
Sbjct: 165 YIASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQ----GQPYFSIDPKTGVIRT 220
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGL+ T VNI +TD+ND P F + VPE
Sbjct: 221 ALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPE 280
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYS-VPED----IPFVVDANT--GDIRTNKALDYEK 165
G A+GR+ A D D GQNA + Y+ VP D V D +T G I+ K LD+E
Sbjct: 281 SSPIGSAIGRIRAVDPDFGQNAEIEYNIVPGDGGNLFDIVTDEDTQEGVIKLKKPLDFET 340
Query: 166 QQLYLERV 173
++ Y +V
Sbjct: 341 KKAYTFKV 348
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY SVPE G V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKVQDINDNEPKFLDGPYIASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQP 207
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F +D TG IRT +D E ++ Y
Sbjct: 208 YFSIDPKTGVIRTALPNMDREVKEQY 233
>gi|274323464|ref|NP_001162101.1| cadherin-9 precursor [Rattus norvegicus]
Length = 788
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 88/189 (46%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + +G +++QV ATD D +G V Y +L YF++DP +
Sbjct: 162 LYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGIIK 217
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEF-SV 111
++Q IQ + GGLS T TVNI +TD+N+ P F Y+F S+
Sbjct: 218 TALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQFNSL 277
Query: 112 PEGQDGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYE 164
G +GR+ A D D G+NA + YS+ E D+ D G I + LD+E
Sbjct: 278 ESAPLGTHLGRIKANDPDTGENAELEYSISEGEGSDMFDVITDKDTQEGIITVKQNLDFE 337
Query: 165 KQQLYLERV 173
K+ LY RV
Sbjct: 338 KKMLYTLRV 346
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 146 IKIHDINDNEPKFTKDLYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQP 205
Query: 146 -FVVDANTGDIRT 157
F VD +G I+T
Sbjct: 206 YFSVDPESGIIKT 218
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G + Y + FV+D NTGDI K LD E++ LY+
Sbjct: 67 GTDTQYVGKLH-TDQDKGDGNLKYILTGDGAGNLFVIDENTGDIHAAKKLDREEKSLYIL 125
Query: 172 RVFLISK 178
R I +
Sbjct: 126 RAKAIDR 132
>gi|410927506|ref|XP_003977183.1| PREDICTED: cadherin-6-like, partial [Takifugu rubripes]
Length = 718
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 95/199 (47%), Gaps = 42/199 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G +++QV ATD D +G V Y +L+ YF++DP T
Sbjct: 88 YMARVPEMSDIGASVIQVTATDADDATYGNSARVVYSILE----GQPYFSVDPETGLIKT 143
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
+Q IQ + GGLS T TV+I ++D+ND P F Y+F VPE
Sbjct: 144 ALPGMDREVKENYQVVIQAKDMAGQMGGLSGTTTVSITLSDVNDNPPRFTKTLYDFRVPE 203
Query: 114 G-QDGLAVGRVHATDADEGQNAVV-YYSVPEDIPFVVDANT------GDIRTNKALDYEK 165
+ G VG V A DAD G+NA + Y + D P V D T G I K LD+EK
Sbjct: 204 SLEPGSVVGVVRALDADIGENAEMDYRIIGSDGPGVFDIATNRSTQDGVIVLRKPLDFEK 263
Query: 166 Q-----QLYLERVFLISKF 179
+ +L +E V L +F
Sbjct: 264 KHQFGLRLQVENVHLNPRF 282
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F PY VPE D G +V +V ATDAD+ G +A V YS+ E P
Sbjct: 71 IKIHDINDNEPKFTKDPYMARVPEMSDIGASVIQVTATDADDATYGNSARVVYSILEGQP 130
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG I+T +D E ++ Y
Sbjct: 131 YFSVDPETGLIKTALPGMDREVKENY 156
>gi|405951762|gb|EKC19647.1| Protocadherin-11 Y-linked [Crassostrea gigas]
Length = 1045
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 93/186 (50%), Gaps = 23/186 (12%)
Query: 14 SDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT--- 70
S +++ G++ + + G ++QV+ATD D G+ G V+Y+LL NN +D +T
Sbjct: 463 SSNIYQGSIPENNRK-GTQVIQVQATDVDQGQNGEVQYQLLQNNVTQQYELAIDSSTGKV 521
Query: 71 -------EHQGPI-------QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
P D+G LSSTATV ++V D ND P F + F V E
Sbjct: 522 TTGITFDRETTPTFVFKVIASDKGPTTLSSTATVMVKVIDENDVAPAFLEKVFLFKVSEQ 581
Query: 115 Q-DGLAVGRVHATDADEGQNA-VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLER 172
+ G VGR+ A D DEG N +Y+ PF V A G ++T +LD EKQ++Y
Sbjct: 582 KAAGTVVGRLIARDFDEGVNGEFEFYAESGTQPFEV-AKDGVVKTTMSLDREKQEVYDFT 640
Query: 173 VFLISK 178
VF+ K
Sbjct: 641 VFVTDK 646
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 78/182 (42%), Gaps = 34/182 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD-------------PATEHQGP 75
+G + V D+DSG G V +LD YF +D P Q P
Sbjct: 373 VGAVIAHVVVIDRDSGMNGYVTC-MLD-----YPYFKIDRLEVNEYKVTVAQPLDREQLP 426
Query: 76 -------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHA 125
+D G L+ST T + D ND P+F S Y+ S+PE + G V +V A
Sbjct: 427 NHTITIVCRDAGTPSLTSTHTFTAIILDSNDNAPKFSSNIYQGSIPENNRKGTQVIQVQA 486
Query: 126 TDADEGQNAVVYY-----SVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
TD D+GQN V Y +V + +D++TG + T D E ++ +V K
Sbjct: 487 TDVDQGQNGEVQYQLLQNNVTQQYELAIDSSTGKVTTGITFDRETTPTFVFKVIASDKGP 546
Query: 181 TS 182
T+
Sbjct: 547 TT 548
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV----PE 142
VN+R+TD+ND P S Y SV E + G + + ATD D G+NA + Y + E
Sbjct: 232 VNVRITDVNDNAPMLSSTIYNVSVKEDEPVGSIILTLKATDLDSGKNAEIRYRLSNHQSE 291
Query: 143 DIP--FVVDANTGDIRTNKALDY 163
+I F +D TG +R K L Y
Sbjct: 292 NIKQLFEIDEITGQLRIAKPLPY 314
>gi|157426905|ref|NP_001098723.1| cadherin-9 [Bos taurus]
Length = 778
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 87/189 (46%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + +G +++QV ATD D +G V Y +L YF++DP +
Sbjct: 149 LYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGIIK 204
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
++Q IQ + GGLS T TVNI +TD+N+ P F Y+F P
Sbjct: 205 TALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQFHSP 264
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYE 164
E G +GR+ A D D G+NA V YS+ E D+ D G I + LD+E
Sbjct: 265 ESVPLGTPLGRIKANDPDVGENAEVEYSIAEGDGADMFDVITDKDTQEGIITVKQNLDFE 324
Query: 165 KQQLYLERV 173
+ LY +V
Sbjct: 325 NKMLYTLKV 333
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 133 IKIHDINDNEPKFTKDLYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQP 192
Query: 146 -FVVDANTGDIRT 157
F VD +G I+T
Sbjct: 193 YFSVDPESGIIKT 205
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G + Y + FV+D NTGDI K LD E++ LY+
Sbjct: 54 GTDTQYVGKLH-TDQDKGDGNLKYILTGDGAGSLFVIDENTGDIHAAKKLDREEKSLYVL 112
Query: 172 RVFLISK 178
R I +
Sbjct: 113 RAKAIDR 119
>gi|440911206|gb|ELR60911.1| Cadherin-9 [Bos grunniens mutus]
Length = 785
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 87/189 (46%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + +G +++QV ATD D +G V Y +L YF++DP +
Sbjct: 163 LYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGIIK 218
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
++Q IQ + GGLS T TVNI +TD+N+ P F Y+F P
Sbjct: 219 TALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQFHSP 278
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYE 164
E G +GR+ A D D G+NA V YS+ E D+ D G I + LD+E
Sbjct: 279 ESVPLGTPLGRIKANDPDVGENAEVEYSIAEGDGADMFDVITDKDTQEGIITVKQNLDFE 338
Query: 165 KQQLYLERV 173
+ LY +V
Sbjct: 339 NKMLYTLKV 347
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPKFTKDLYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRT 157
F VD +G I+T
Sbjct: 207 YFSVDPESGIIKT 219
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G + Y + FV+D NTGDI K LD E++ LY+
Sbjct: 68 GTDTQYVGKLH-TDQDKGDGNLKYILTGDGAGSLFVIDENTGDIHAAKKLDREEKSLYVL 126
Query: 172 RVFLISK 178
R I +
Sbjct: 127 RAKAIDR 133
>gi|403298924|ref|XP_003940250.1| PREDICTED: cadherin-12 [Saimiri boliviensis boliviensis]
Length = 794
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 88/188 (46%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + +G ++QVKATD D +G V Y +L YF++DP T
Sbjct: 165 YVATVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQ----GQPYFSIDPKTGVIRT 220
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGL+ T VNI +TD+ND P F + VPE
Sbjct: 221 ALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPE 280
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYS-VPED----IPFVVDANT--GDIRTNKALDYEK 165
G A+GR+ A D D GQNA + Y+ VP D V D T G I+ K LD+E
Sbjct: 281 SSPVGSAIGRIRAVDPDFGQNAEIEYNIVPGDGGNLFDIVTDEETQEGVIKLKKPLDFET 340
Query: 166 QQLYLERV 173
++ Y +V
Sbjct: 341 KKAYTFKV 348
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE G V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKVQDINDNEPKFLDGPYVATVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQP 207
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F +D TG IRT +D E ++ Y
Sbjct: 208 YFSIDPKTGVIRTALPNMDREVKEQY 233
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 51/113 (45%), Gaps = 11/113 (9%)
Query: 61 ASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
AS +LD GP +D TATV I V D+ D+ P F Y V E G
Sbjct: 350 ASNLHLDHRFHSAGPFKD------TATVKISVLDV-DEPPVFSKPLYTMEVYEDTPVGTI 402
Query: 120 VGRVHATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+G V A D D G +AV Y + D F +D N G I TN+ LD E Y
Sbjct: 403 IGAVTAQDLDVGSSAVRYFIDWKSDGDSYFTIDGNEGTIATNELLDRESTAQY 455
>gi|296194864|ref|XP_002745149.1| PREDICTED: cadherin-12 [Callithrix jacchus]
Length = 794
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 88/188 (46%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + +G ++QVKATD D +G V Y +L YF++DP T
Sbjct: 165 YVATVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQ----GQPYFSIDPKTGVIRT 220
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGL+ T VNI +TD+ND P F + VPE
Sbjct: 221 ALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPE 280
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYS-VPED----IPFVVDANT--GDIRTNKALDYEK 165
G A+GR+ A D D GQNA + Y+ VP D V D T G I+ K LD+E
Sbjct: 281 SSPIGSAIGRIRAVDPDFGQNAEIEYNIVPGDGGNLFDIVTDEETQEGVIKLKKPLDFET 340
Query: 166 QQLYLERV 173
++ Y +V
Sbjct: 341 KKAYTFKV 348
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE G V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKVQDINDNEPKFLDGPYVATVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQP 207
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F +D TG IRT +D E ++ Y
Sbjct: 208 YFSIDPKTGVIRTALPNMDREVKEQY 233
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 61 ASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
AS +LD GP +D TATV I V D+ D+ P F Y V E G
Sbjct: 350 ASNLHLDHRFHSAGPFKD------TATVKISVLDV-DEPPVFSKPLYTMEVYEDTPIGTI 402
Query: 120 VGRVHATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYE 164
+G V A D D G +AV Y + D F +D N G I TN+ LD E
Sbjct: 403 IGAVTAQDLDVGSSAVRYFIDWKSDGDSYFTIDGNEGTIATNELLDRE 450
>gi|119370308|sp|P70407.2|CADH9_MOUSE RecName: Full=Cadherin-9; AltName: Full=T1-cadherin; Flags:
Precursor
Length = 786
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 88/189 (46%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + +G +++QV ATD D +G V Y +L YF++DP +
Sbjct: 162 LYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGIIK 217
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEF-SV 111
++Q IQ + GGLS T TVNI +TD+N+ P F Y+F S+
Sbjct: 218 TALPDMSRENKEQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQFNSL 277
Query: 112 PEGQDGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYE 164
G +GR+ A D D G+NA + YS+ E D+ D G I + LD+E
Sbjct: 278 ESAPLGTHLGRIKANDPDMGENAELEYSIAEGEGSDMFDVITDKDTQEGIITVKQNLDFE 337
Query: 165 KQQLYLERV 173
K+ LY RV
Sbjct: 338 KKMLYTLRV 346
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 146 IKIHDINDNEPKFTKDLYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQP 205
Query: 146 -FVVDANTGDIRT 157
F VD +G I+T
Sbjct: 206 YFSVDPESGIIKT 218
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G + Y + FV+D NTGDI K LD E++ LY+
Sbjct: 67 GTDTQYVGKLH-TDQDKGDGNLKYILTGDGAGNLFVIDENTGDIHAAKRLDREEKSLYIL 125
Query: 172 RVFLISK 178
R I +
Sbjct: 126 RAKAIDR 132
>gi|432913578|ref|XP_004078978.1| PREDICTED: cadherin-6-like [Oryzias latipes]
Length = 812
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 84/183 (45%), Gaps = 33/183 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A ++ ++G ++QV ATD D +G + +L + + YF++DP T
Sbjct: 169 YTASIPERSDVGTPVIQVTATDADDSMYG-IGAKLFYSISRGHPYFSVDPTTGVIRTALG 227
Query: 71 ---------EHQGPIQD-------EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
EH + + GGL+ T VNI +TD+ND P F Y+ SVPE
Sbjct: 228 PKDMDRETKEHYQVVIEAKDMAGQRGGLTGTTVVNISLTDVNDNPPVFTQSVYQLSVPES 287
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQ 166
G VG V ATD D G+NA + +S+ DI + G I K LDYEK+
Sbjct: 288 AMFGTVVGSVQATDRDIGRNAEMSFSITSGDSMGIFDISTDKNTQNGVITVKKPLDYEKK 347
Query: 167 QLY 169
Y
Sbjct: 348 SSY 350
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ D+ND P+F Y S+PE D G V +V ATDAD+ G A ++YS+ P
Sbjct: 152 IKLQDMNDNEPQFSQEVYTASIPERSDVGTPVIQVTATDADDSMYGIGAKLFYSISRGHP 211
Query: 146 -FVVDANTGDIRTN---KALDYEKQQLY 169
F VD TG IRT K +D E ++ Y
Sbjct: 212 YFSVDPTTGVIRTALGPKDMDRETKEHY 239
>gi|169234947|ref|NP_033999.1| cadherin-9 precursor [Mus musculus]
Length = 788
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 88/189 (46%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + +G +++QV ATD D +G V Y +L YF++DP +
Sbjct: 162 LYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGIIK 217
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEF-SV 111
++Q IQ + GGLS T TVNI +TD+N+ P F Y+F S+
Sbjct: 218 TALPDMSRENKEQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQFNSL 277
Query: 112 PEGQDGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYE 164
G +GR+ A D D G+NA + YS+ E D+ D G I + LD+E
Sbjct: 278 ESAPLGTHLGRIKANDPDMGENAELEYSIAEGEGSDMFDVITDKDTQEGIITVKQNLDFE 337
Query: 165 KQQLYLERV 173
K+ LY RV
Sbjct: 338 KKMLYTLRV 346
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 146 IKIHDINDNEPKFTKDLYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQP 205
Query: 146 -FVVDANTGDIRT 157
F VD +G I+T
Sbjct: 206 YFSVDPESGIIKT 218
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G + Y + FV+D NTGDI K LD E++ LY+
Sbjct: 67 GTDTQYVGKLH-TDQDKGDGNLKYILTGDGAGNLFVIDENTGDIHAAKRLDREEKSLYIL 125
Query: 172 RVFLISK 178
R I +
Sbjct: 126 RAKAIDR 132
>gi|426246686|ref|XP_004017123.1| PREDICTED: cadherin-9 [Ovis aries]
Length = 789
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 87/189 (46%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + +G +++QV ATD D +G V Y +L YF++DP +
Sbjct: 163 LYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGIIK 218
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
++Q IQ + GGLS T TVNI +TD+N+ P F Y+F P
Sbjct: 219 TALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQFHSP 278
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYE 164
E G +GR+ A D D G+NA V YS+ E D+ D G I + LD+E
Sbjct: 279 ESVPLGTPLGRIKANDPDVGENAEVEYSIAEGDGADMFDVITDKDTQEGIITVKQNLDFE 338
Query: 165 KQQLYLERV 173
+ LY +V
Sbjct: 339 NKMLYTLKV 347
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPKFTKDLYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRT 157
F VD +G I+T
Sbjct: 207 YFSVDPESGIIKT 219
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G + Y + FV+D NTGDI K LD E++ LY+
Sbjct: 68 GTDTQYVGKLH-TDQDKGDGNLKYILTGDGAGSLFVIDENTGDIHAAKKLDREEKSLYVL 126
Query: 172 RVFLISK 178
R I +
Sbjct: 127 RAKAIDR 133
>gi|354486328|ref|XP_003505333.1| PREDICTED: cadherin-9 [Cricetulus griseus]
gi|344244410|gb|EGW00514.1| Cadherin-9 [Cricetulus griseus]
Length = 788
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 90/189 (47%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + +G +++QV ATD D +G V Y +L YF++DP +
Sbjct: 162 LYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGIIK 217
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEF-SV 111
++Q IQ + GGLS T TVNI +TD+N+ P F Y+F S+
Sbjct: 218 TALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQFNSL 277
Query: 112 PEGQDGLAVGRVHATDADEGQNAVVYYSVPE----DIPFVV---DANTGDIRTNKALDYE 164
G +GR+ A D D G+NA + YS+ E D+ V+ D G I + LD+E
Sbjct: 278 ESAPLGTHLGRIKANDPDTGENAELEYSISEGEGSDMFEVITDKDTQEGIITVKQNLDFE 337
Query: 165 KQQLYLERV 173
K+ LY RV
Sbjct: 338 KKMLYTLRV 346
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 146 IKIHDINDNEPKFTKDLYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQP 205
Query: 146 -FVVDANTGDIRT 157
F VD +G I+T
Sbjct: 206 YFSVDPESGIIKT 218
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G + Y + FV+D NTGDI K LD E++ LY+
Sbjct: 67 GTDTQYVGKLH-TDQDKGDGNLKYILTGDGAGNLFVIDENTGDIHAAKKLDREEKSLYIL 125
Query: 172 RVFLISK 178
R I +
Sbjct: 126 RAKAIDR 132
>gi|344272222|ref|XP_003407934.1| PREDICTED: cadherin-9 [Loxodonta africana]
Length = 789
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 88/189 (46%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + +G +++QV ATD D +G V Y +L YF++DP +
Sbjct: 163 LYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGIIK 218
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
++Q IQ + GGLS T TVNI +TD+N+ P F Y+F P
Sbjct: 219 TALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQRTYQFKSP 278
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYE 164
E G +GR+ A+D D G+NA + YS+ E D+ D G I + LD+E
Sbjct: 279 ESVPLGTHLGRIKASDPDVGENAEMEYSLAEGDGADMFDVITDKDTQEGIITVKQNLDFE 338
Query: 165 KQQLYLERV 173
+ LY RV
Sbjct: 339 TKILYTLRV 347
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPKFTKDLYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRT 157
F VD +G I+T
Sbjct: 207 YFSVDPESGIIKT 219
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G + Y + FV+D NTGDI K LD E++ LY+
Sbjct: 68 GTDTQYVGKLH-TDQDKGDGNLKYILTGDGAGSLFVIDENTGDIHAAKKLDREEKSLYIL 126
Query: 172 RVFLISK 178
R I +
Sbjct: 127 RAKAIDR 133
>gi|432112003|gb|ELK35037.1| Cadherin-12 [Myotis davidii]
Length = 727
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 89/185 (48%), Gaps = 31/185 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G ++QVKATD D +G R++ + YF++DP T
Sbjct: 98 YIASVPEMSPVGAYVLQVKATDADDPTYG-NSARVVYSVLQGQPYFSIDPKTGVIRTALP 156
Query: 71 --------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
++Q IQ + GGL+ T VNI +TD+ND P F + VPE
Sbjct: 157 NMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPESSP 216
Query: 117 -GLAVGRVHATDADEGQNAVVYYS-VPED----IPFVVDANT--GDIRTNKALDYEKQQL 168
G A+GR+ A D D GQNA + Y+ VP D V D +T G I+ K LD+E ++
Sbjct: 217 IGSAIGRIRAVDPDFGQNAEIEYNIVPGDGGNLFDIVTDEDTQEGIIKLKKPLDFETKKA 276
Query: 169 YLERV 173
Y +V
Sbjct: 277 YTFKV 281
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY SVPE G V +V ATDAD+ G +A V YSV + P
Sbjct: 81 IKVQDINDNEPKFLDGPYIASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSVLQGQP 140
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F +D TG IRT +D E ++ Y
Sbjct: 141 YFSIDPKTGVIRTALPNMDREVKEQY 166
>gi|224045060|ref|XP_002199084.1| PREDICTED: cadherin-12 [Taeniopygia guttata]
Length = 793
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + +G ++QVKATD D +G V Y +L YF++DP T
Sbjct: 165 YIASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQ----GQPYFSIDPKTGVIRT 220
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGL+ T TVNI +TD+ND P F + VPE
Sbjct: 221 ALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTTVNITLTDVNDNPPRFPKSIFHLKVPE 280
Query: 114 -GQDGLAVGRVHATDADEGQNAVVYYS-VPEDIPFVVDANT------GDIRTNKALDYEK 165
G A+GR+ A D D G+NA + Y+ VP D + D T G I+ K LD+E
Sbjct: 281 TSHVGSAIGRIRAVDPDFGKNAEIEYNIVPGDGGNLFDITTDEYTQEGVIKLKKPLDFET 340
Query: 166 QQLYLERV 173
++ Y +V
Sbjct: 341 KKAYTFKV 348
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY SVPE G V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKVQDINDNEPKFLDGPYIASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQP 207
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F +D TG IRT +D E ++ Y
Sbjct: 208 YFSIDPKTGVIRTALPNMDREVKEQY 233
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 76/192 (39%), Gaps = 46/192 (23%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR--------LLDNNTDA------- 60
S+F+ + H +G + +++A D D GK +EY L D TD
Sbjct: 272 SIFHLKVPETSH-VGSAIGRIRAVDPDFGKNAEIEYNIVPGDGGNLFDITTDEYTQEGVI 330
Query: 61 -------------------ASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPE 101
AS +LD GP +D TATV I V D+ D+ P
Sbjct: 331 KLKKPLDFETKKAYTFKVEASNLHLDHRFHSVGPFKD------TATVKINVLDM-DEPPV 383
Query: 102 FQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRT 157
F Y V E G +G V A D D G ++V Y+ + D F +DA G I T
Sbjct: 384 FSKPVYTMEVYEDTPVGTIIGAVTAQDLDAGSSSVRYFMDWKNDVDSYFTIDATEGTIAT 443
Query: 158 NKALDYEKQQLY 169
N+ LD E Y
Sbjct: 444 NELLDRESTAQY 455
>gi|395510867|ref|XP_003759689.1| PREDICTED: cadherin-12 [Sarcophilus harrisii]
Length = 794
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + +G ++QVKATD D +G V Y +L YF++DP T
Sbjct: 165 YVASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQ----GQPYFSIDPKTGVIRT 220
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGL+ T TVNI +TD+ND P F + VPE
Sbjct: 221 ALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTTVNITLTDVNDNPPRFPKSIFHLKVPE 280
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEK 165
G A+GR+ A D D G+NA + Y++ DI D G I+ K LD+E
Sbjct: 281 SSLVGSAIGRIRAVDPDFGKNAEIEYNIVPGDGGNLFDIMTDEDTQEGIIKLKKPLDFET 340
Query: 166 QQLYLERV 173
++ Y +V
Sbjct: 341 KKAYTFKV 348
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY SVPE G V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKVQDINDNEPKFLDGPYVASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQP 207
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F +D TG IRT +D E ++ Y
Sbjct: 208 YFSIDPKTGVIRTALPNMDREVKEQY 233
>gi|395840235|ref|XP_003792969.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-6 [Otolemur garnettii]
Length = 788
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 88/187 (47%), Gaps = 35/187 (18%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 163 IYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGXTC 218
Query: 71 ----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
+ IQ + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 219 LYGVDQEKIRHYXVVIQAKDMGGQMGGLSGTTTVNISLTDVNDNPPRFPQSTYQFKTPES 278
Query: 115 Q-DGLAVGRVHATDADEGQNAVVYYSVPED-----IPFVVDANT--GDIRTNKALDYEKQ 166
G +GR+ A+DAD G+NA + YS+ + V D T G I K LD+EK+
Sbjct: 279 SPPGTPIGRIKASDADVGENAEIEYSITDGEGLDMFDVVTDQETQEGIITVKKLLDFEKK 338
Query: 167 QLYLERV 173
++Y +V
Sbjct: 339 KVYTLKV 345
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPIFTKEIYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTG 153
F V++ TG
Sbjct: 207 YFSVESETG 215
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H+ D D G ++ Y + F+++ NTGDI+ K LD E++ +Y+
Sbjct: 68 GSDYQYVGKLHS-DQDRGDGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYIL 126
Query: 172 RVFLISK 178
R I++
Sbjct: 127 RAQAINR 133
>gi|449281267|gb|EMC88387.1| Cadherin-18 [Columba livia]
Length = 790
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
E+G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 EMGTSVLQVTATDADDPTYGNSARVVYSILQGQ----PYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + Y++ I D G + K L+YEK++ Y
Sbjct: 289 KIKANDADTGSNADMKYTIINGDGSGVFSISTDKDTREGILSLKKPLNYEKKKSY 343
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE + G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSEMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 65/144 (45%), Gaps = 20/144 (13%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYF--------NLDPATEHQGPIQDEGGLSSTATVN 89
+TDKD+ + G++ + N SY +LD H GP +D +
Sbjct: 319 STDKDT-REGILSLKKPLNYEKKKSYTLNIEGANTHLDFRFSHLGPFKD------VTMLK 371
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY---SVPEDIP 145
I V D+ D+ P F Y V E + G AVG V A D D + V Y+ + ED
Sbjct: 372 IIVGDV-DEPPLFTMPSYVMEVYENAEIGSAVGTVTAQDPDTANSLVRYFIDHNTEEDSY 430
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DA+TG I+T K D E+ Y
Sbjct: 431 FTIDASTGTIKTAKIFDREETPWY 454
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 53/133 (39%), Gaps = 27/133 (20%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ---------- 77
E+G + V A D D+ LV Y +D+NT+ SYF +D +T G I+
Sbjct: 397 EIGSAVGTVTAQDPDTAN-SLVRY-FIDHNTEEDSYFTIDAST---GTIKTAKIFDREET 451
Query: 78 ------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHA 125
D L S V +R+ D+ND PE + + G + + A
Sbjct: 452 PWYNITVAASEIDNPELVSHVPVGVRILDVNDNPPELVREYDAIVCEDSKPGQVIQTITA 511
Query: 126 TDADEGQNAVVYY 138
TD D N ++
Sbjct: 512 TDKDNSANGARFH 524
Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|392338637|ref|XP_003753587.1| PREDICTED: cadherin-18 [Rattus norvegicus]
gi|392345462|ref|XP_003749271.1| PREDICTED: cadherin-18 [Rattus norvegicus]
Length = 790
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ I D G + K L+YEK++ Y
Sbjct: 289 KIKANDADTGSNADMTYSITNGDGIGVFSISTDKDTREGILSLKKPLNYEKKKSY 343
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 66/144 (45%), Gaps = 20/144 (13%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYF--------NLDPATEHQGPIQDEGGLSSTATVN 89
+TDKD+ + G++ + N SY +LD H GP +D +
Sbjct: 319 STDKDT-REGILSLKKPLNYEKKKSYTLNIEGANTHLDFRFSHLGPFKD------ATMLK 371
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYY---SVPEDIP 145
I V D+ D+ P F Y V E + G VG V A D D + V Y+ S E+
Sbjct: 372 IIVGDV-DEPPLFSMPSYVMEVYENAKIGTIVGTVLAQDPDSANSLVRYFINHSTEEERF 430
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DANTG I+T+K LD E+ Y
Sbjct: 431 FNIDANTGTIKTSKVLDREETPWY 454
Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|348555728|ref|XP_003463675.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-10-like [Cavia porcellus]
Length = 708
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 164 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 222
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F V E
Sbjct: 223 PNMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESS 282
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G AVG V ATDAD G+NA V Y + + DI D G I K LDYE ++
Sbjct: 283 PVGTAVGSVKATDADTGKNAEVEYRIIDGDGTEMFDIITEKDTQEGIITVKKPLDYESRR 342
Query: 168 LYLERV 173
LY +V
Sbjct: 343 LYTLKV 348
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|351714550|gb|EHB17469.1| Cadherin-10 [Heterocephalus glaber]
Length = 788
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 164 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 222
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F V E
Sbjct: 223 PNMNRENKEQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESS 282
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G AVG V ATDAD G+NA V Y + + DI D G I K LDYE ++
Sbjct: 283 PVGTAVGSVKATDADTGKNAEVEYRIIDGDGTDMFDIVTEKDTQEGIITVKKPLDYESRR 342
Query: 168 LYLERV 173
LY +V
Sbjct: 343 LYTLKV 348
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|300794761|ref|NP_001178634.1| protocadherin Fat 4 [Rattus norvegicus]
Length = 4979
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 76/164 (46%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y L+ D+ F +DP + EH+
Sbjct: 1756 GSKIMQLTAMDADEGANALVTYALISGADDS---FRIDPESGDLIATKRLDREHRSKYSL 1812
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G SS +NI ++D+ND P F Y F +PE G V + ATD D G
Sbjct: 1813 LVRADDGLQSSDMRINITISDVNDHTPRFSRPVYSFDIPEDTTPGSLVAAILATDDDSGV 1872
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG +ALDYE+QQ Y+ V
Sbjct: 1873 NGEISYVVEEDDGDGVFFLNPVTGVFNLTRALDYERQQYYILTV 1916
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 84/172 (48%), Gaps = 26/172 (15%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL+ Y + N + A + +
Sbjct: 3096 ATIPESHSIGSVVRTVSARDRDTAMNGLISYNISSGNEEGIFAINSSTGVVTLAKALDYE 3155
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEF---SVPEGQDGLAV 120
+++H+ I D G ++ T ++ + V D+ND +P F +P EF + G V
Sbjct: 3156 LSSKHEMTISATDGGWVARTGYCSLTVSVIDVNDNSPVF--VPDEFFPTVMENAPSGTTV 3213
Query: 121 GRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y+V D+ FV+D NTG I T LD+E +Q Y
Sbjct: 3214 IHLNATDADSGANAVIAYTVQSSDSDL-FVIDPNTGVITTQGFLDFETKQSY 3264
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V ATDKDSG G + Y +++ N +++ F ++ AT I+
Sbjct: 2687 ILTVSATDKDSGPNGQLAYEIVNGNQESS--FTINHATGEIRSIRPLDREKISYYELTVK 2744
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQN 133
D+G S + +V I V D ND P F + + G V RV +D D G N
Sbjct: 2745 SSDKGSPSQSTSVKVIISVLDENDNAPRFSQIFSAYVSENSPLGYTVTRVTTSDEDIGIN 2804
Query: 134 AVVYYSVPED-IPFVVDANTGDIRTNKALDYEKQQLYLERV 173
A+ YS+ + +PF ++ NTGDI ++ L+ E Y RV
Sbjct: 2805 AISRYSIADTALPFTINPNTGDIVISRPLNREDTDRYRIRV 2845
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 72/168 (42%), Gaps = 22/168 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y + D A F ++P T
Sbjct: 2774 SQIFSAYVSENSPLGYTVTRVTTSDEDIGINAISRYSI----ADTALPFTINPNTGDIVI 2829
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
P+ E G + + V I VTDIND P F Y PE + G
Sbjct: 2830 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNTPRFSRPSYYLDCPELTELGS 2889
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
V +V ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 2890 RVTQVSATDPDEGSNGQVFYFIKSKSEYFRINATTGEIFNKQVLKYQN 2937
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 73/162 (45%), Gaps = 23/162 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI----QDEGGL--- 82
G L+ + ATD D G G V + L + +D F LDP + I ++E
Sbjct: 599 GTELLVLGATDGDLGDNGTVRFSLQEAESDQ-RLFRLDPVSGRLSTISSLDREEQAFYCL 657
Query: 83 ------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
SST VN+ + DIND +P F + Y + E + G + V V ATD D
Sbjct: 658 LILATDLGSPPQSSTVQVNVSLLDINDNSPVFYPVQYFAHIQENEPGGSYVTTVSATDPD 717
Query: 130 EGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V YS+ + F + A +G I T ALD E++ Y
Sbjct: 718 MGPNGTVKYSISAGDRSRFQIHAKSGVISTKMALDREEKTAY 759
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 38 ATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGGLSSTAT--- 87
ATD D G G+ YR++ N A F LD G + +GGL T
Sbjct: 159 ATDSDIGSNGVDHRSYRIVRGN--EAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQY 216
Query: 88 -------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
VN+ V DIND P F S Y+ VPE G +V +V A D
Sbjct: 217 QLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAAD 276
Query: 128 ADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ADEG NA + Y + E PF +D TG I + LD+E ++ Y
Sbjct: 277 ADEGTNADIRYRLQDEGTPFQMDPETGLITVREPLDFEARRQY 319
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 76/175 (43%), Gaps = 25/175 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD---------- 67
FY A + +++V A+D D G GL+ Y +L N + F++D
Sbjct: 1214 FYQATVSETATNLTQVLRVSASDVDEGNNGLIHYSILKGNEE--RQFSIDRFSGQVTLVG 1271
Query: 68 -------PATEHQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
PA D G L+ST T++I + D ND P F V E + G
Sbjct: 1272 KLDYEATPAYSLLIQAVDSGTVPLNSTCTLSIDILDENDNTPSFPKSTLFVDVLENMRIG 1331
Query: 118 LAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD+D G NA ++Y++ F + NTG I K LD+E Q LY
Sbjct: 1332 ELVSSVTATDSDSGVNADLHYTITGSNNHGTFSISPNTGSIFLAKKLDFETQSLY 1386
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 76/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3210 GTTVIHLNATDADSGANAVIAYTVQSSDSD---LFVIDPNT---GVITTQGFLDFETKQS 3263
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S ATVNI++ N+ P F S Y F V E G AVG V A+
Sbjct: 3264 YHLTVKAFNVPDEEKCSFATVNIQLMGTNEYVPRFVSKLYYFEVSEAAPRGTAVGEVFAS 3323
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F + TG I + LD EK+ ERV L
Sbjct: 3324 DRDMGADGEVHYLIFGNSRKKGFQIHKMTGQIYVSGLLDREKE----ERVSL 3371
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 76/169 (44%), Gaps = 29/169 (17%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP---- 75
GA+ R T++QV A D D G + Y LL N D A F L + E +
Sbjct: 2273 GALPR-------TILQVVARDDDQGPNSQLSYVLLGGNEDNA--FALTASGELRVTQSLD 2323
Query: 76 ------------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAV 120
D G L+ T T+NI V DIND P F S Y ++PE G V
Sbjct: 2324 REARDHFVLVVTAADAGSPALTGTGTINIIVDDINDNVPTFASNMYFTAIPEDAPTGTDV 2383
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V+A+DAD NAV+ + + F ++ +TG I T+ LD E + Y
Sbjct: 2384 LLVNASDADAATNAVISI-IGGNSQFTINPSTGQIITSALLDRETKDNY 2431
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 71/170 (41%), Gaps = 22/170 (12%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------ 68
D + Y + + +V+A DKDSG G + Y + D N+ A F + P
Sbjct: 997 DQISYEVTLSESEPVNSRFFKVQALDKDSGANGEIAYAITDGNSGEA--FGIFPDGQLYI 1054
Query: 69 ATEHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+E +QD LS+T V + + D+ND P F S Y F E Q
Sbjct: 1055 KSELDRELQDRYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQR 1114
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
G VG+V A D D G N V Y+ P F + A TG+I D E
Sbjct: 1115 AGSFVGKVSAVDKDFGPNGEVRYAFEVAQPDFELHAITGEITNTHKFDRE 1164
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 69/161 (42%), Gaps = 20/161 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +ATD DSG +EY LL+ + S +D G + D
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNPAGNKFSIGTIDGEVHLTGELDREEVSNYSLTVVATD 2128
Query: 79 EGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y + E G + +V A D DEG N
Sbjct: 2129 KGQPPLSSSTEVVVMVLDINDNNPVFAQAMYRVQIKENTLTGTDIIQVSAADNDEGTNGQ 2188
Query: 136 VYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V Y + F +D+ TG I K+LD E Y+ V
Sbjct: 2189 VRYGIVGGNTHQEFRIDSVTGAITVAKSLDRETIPAYILTV 2229
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L ATV++ + DIND P+F Y+ +V E L V RV A+D DEG N +++YS+
Sbjct: 1190 LKDQATVHVYMKDINDNAPKFLKDFYQATVSETATNLTQVLRVSASDVDEGNNGLIHYSI 1249
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E+ F +D +G + LDYE Y
Sbjct: 1250 LKGNEERQFSIDRFSGQVTLVGKLDYEATPAY 1281
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 27/177 (15%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH----- 72
Y ++ G ++QV A D D G G V Y ++ NT F +D T
Sbjct: 2158 MYRVQIKENTLTGTDIIQVSAADNDEGTNGQVRYGIVGGNTHQE--FRIDSVTGAITVAK 2215
Query: 73 --------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
Q + + + TV I + D+ND P F+ PY +VPE L
Sbjct: 2216 SLDRETIPAYILTVQATDRGSSPRTDSCTVAITLLDMNDFVPVFELSPYSVNVPENLGAL 2275
Query: 119 --AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ +V A D D+G N+ + Y + ED F + A +G++R ++LD E + ++
Sbjct: 2276 PRTILQVVARDDDQGPNSQLSYVLLGGNEDNAFALTA-SGELRVTQSLDREARDHFV 2331
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1724 AEVEITLQDINDNPPVFPTDTLDLTVEENIGDGSKIMQLTAMDADEGANALVTYALISGA 1783
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ K LD E + Y
Sbjct: 1784 DDSFRIDPESGDLIATKRLDREHRSKY 1810
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 22/159 (13%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQG-- 74
++G L++V A D KD G VEY + LDN+T S + + +Q
Sbjct: 2997 KVGTKLIKVTAVDDKDFGLNSEVEYFVSNGNHLGKFKLDNDTGWISIASSLVSDLNQNFF 3056
Query: 75 ---PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D+G LSS ++I VT+ N PEF ++PE G V V A D
Sbjct: 3057 IRVTAKDKGNPPLSSQVVIHITVTEENYHTPEFSQSHISATIPESHSIGSVVRTVSARDR 3116
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYE 164
D N ++ Y++ E+ F ++++TG + KALDYE
Sbjct: 3117 DTAMNGLISYNISSGNEEGIFAINSSTGVVTLAKALDYE 3155
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 71/159 (44%), Gaps = 20/159 (12%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY-------FNLDPATEHQGP------- 75
G + + ATD DSG G + Y + +++ D + FNL A +++
Sbjct: 1857 GSLVAAILATDDDSGVNGEISYVVEEDDGDGVFFLNPVTGVFNLTRALDYERQQYYILTV 1916
Query: 76 -IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
+D GG +T + DIND P F Y S+ E G V + TDAD+G N
Sbjct: 1917 RAEDGGGQFTTIRAYFNILDINDNPPVFSLSSYSTSLMENLPLGSTVLVFNVTDADDGVN 1976
Query: 134 AVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ + YS+ F VD + G ++ KALD E Q Y
Sbjct: 1977 SQLSYSIASGDSLGQFAVDKH-GVLKALKALDRESQSFY 2014
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV- 140
SS ++I V DIND P F+ P+ + E + V ATD D G N + Y +
Sbjct: 2649 FSSYEKLDITVLDINDNAPAFEEDPFVSEILENLSPRKILTVSATDKDSGPNGQLAYEIV 2708
Query: 141 --PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ F ++ TG+IR+ + LD EK Y
Sbjct: 2709 NGNQESSFTINHATGEIRSIRPLDREKISYY 2739
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
G ++ A VNI V D+ND P F Q++ +V Q G ++ + A D DEG N V Y
Sbjct: 871 GAVTGDAVVNITVKDLNDNAPHFLQAVESIDAVENWQAGHSIFQAKAVDPDEGVNGRVLY 930
Query: 139 SV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
S+ P+++ F ++ G+I LD +E V
Sbjct: 931 SLKQNPKNL-FTINEQNGNISLLGTLDVHAGSYQVEIV 967
Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 67/173 (38%), Gaps = 32/173 (18%)
Query: 23 ARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPATEHQGP 75
A + + G ++ Q KA D D G G V Y L N N + L H G
Sbjct: 902 AVENWQAGHSIFQAKAVDPDEGVNGRVLYSLKQNPKNLFTINEQNGNISLLGTLDVHAGS 961
Query: 76 IQDE--------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
Q E LSS+ + + V D+ND P F + YE ++ E + +V A
Sbjct: 962 YQVEIVASDMGVPQLSSSIILTVYVHDVNDNPPVFDQISYEVTLSESEPVNSRFFKVQAL 1021
Query: 127 DADEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYL 170
D D G N + Y+ + D N+G+ + LD E Q Y+
Sbjct: 1022 DKDSGANGEIAYA-------ITDGNSGEAFGIFPDGQLYIKSELDRELQDRYV 1067
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 69/160 (43%), Gaps = 27/160 (16%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH 72
+ DSL G A DKH + L +KA D++S F + ++ D AS F
Sbjct: 1985 SGDSL--GQFAVDKHGV---LKALKALDRESQSFYNLVIQVHDLPQPPASRF-------- 2031
Query: 73 QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+STA V+I + D+ND P F S P +PE V + ATD D G
Sbjct: 2032 ----------TSTAQVSIILLDVNDNPPMFLS-PKLTYIPENTPIDTVVFKAQATDPDSG 2080
Query: 132 QNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
N+ + Y++ P F + G++ LD E+ Y
Sbjct: 2081 PNSYIEYTLLNPAGNKFSIGTIDGEVHLTGELDREEVSNY 2120
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N V Y + +
Sbjct: 1515 VTILVTDLNDNVPIFISQNALAADPSAMIGSVLTTIMAADPDEGANGEVEYEIVNGDTDT 1574
Query: 146 FVVDANTGDIRTNKAL 161
F VD +GD+R AL
Sbjct: 1575 FTVDRYSGDLRVASAL 1590
Score = 38.9 bits (89), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 69/175 (39%), Gaps = 22/175 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G V+Y + + ++ LD
Sbjct: 694 YFAHIQENEPGGSYVTTVSATDPDMGPNGTVKYSISAGDRSRFQIHAKSGVISTKMALDR 753
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V + V D D P F Y F V E G VG
Sbjct: 754 EEKTAYQLQIVATDGGNLQSPSQAIVTVTVLDTQDNPPVFSQAAYSFVVFENVALGYHVG 813
Query: 122 RVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V AT D NA + Y + + F ++ TG + T +D E+Q Y RV
Sbjct: 814 SVSATTMD--LNANISYLITTGDQRGMFAMNPVTGQLTTASVIDREEQSFYQLRV 866
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 68/166 (40%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG + Y + +N F++ P T E Q
Sbjct: 1329 RIGELVSSVTATDSDSGVNADLHYTITGSNNHGT--FSISPNTGSIFLAKKLDFETQSLY 1386
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G SST +V I V D ND P F S+ E G +V V A D
Sbjct: 1387 KLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPLGTSVISVTAHD 1446
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + Y++ + +P F +D G I T+ +D E L+
Sbjct: 1447 PDADINGQLSYAIIQQMPRGNHFSIDEVKGTIYTSAEIDREFANLF 1492
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 75 PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQN 133
P + SS A++ I V DIND P F+ Y ++ E G V V ATD D G N
Sbjct: 448 PTAEVQARSSVASLVIFVNDINDHPPVFEQQVYRVNLSEEVPPGSYVSGVSATDGDSGLN 507
Query: 134 AVVYYSV 140
A + YS+
Sbjct: 508 ANLRYSI 514
>gi|392338710|ref|XP_001070073.3| PREDICTED: protocadherin Fat 4 [Rattus norvegicus]
Length = 4981
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 76/164 (46%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y L+ D+ F +DP + EH+
Sbjct: 1756 GSKIMQLTAMDADEGANALVTYALISGADDS---FRIDPESGDLIATKRLDREHRSKYSL 1812
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G SS +NI ++D+ND P F Y F +PE G V + ATD D G
Sbjct: 1813 LVRADDGLQSSDMRINITISDVNDHTPRFSRPVYSFDIPEDTTPGSLVAAILATDDDSGV 1872
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG +ALDYE+QQ Y+ V
Sbjct: 1873 NGEISYVVEEDDGDGVFFLNPVTGVFNLTRALDYERQQYYILTV 1916
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 84/172 (48%), Gaps = 26/172 (15%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL+ Y + N + A + +
Sbjct: 3098 ATIPESHSIGSVVRTVSARDRDTAMNGLISYNISSGNEEGIFAINSSTGVVTLAKALDYE 3157
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEF---SVPEGQDGLAV 120
+++H+ I D G ++ T ++ + V D+ND +P F +P EF + G V
Sbjct: 3158 LSSKHEMTISATDGGWVARTGYCSLTVSVIDVNDNSPVF--VPDEFFPTVMENAPSGTTV 3215
Query: 121 GRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y+V D+ FV+D NTG I T LD+E +Q Y
Sbjct: 3216 IHLNATDADSGANAVIAYTVQSSDSDL-FVIDPNTGVITTQGFLDFETKQSY 3266
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V ATDKDSG G + Y +++ N +++ F ++ AT I+
Sbjct: 2689 ILTVSATDKDSGPNGQLAYEIVNGNQESS--FTINHATGEIRSIRPLDREKISYYELTVK 2746
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQN 133
D+G S + +V I V D ND P F + + G V RV +D D G N
Sbjct: 2747 SSDKGSPSQSTSVKVIISVLDENDNAPRFSQIFSAYVSENSPLGYTVTRVTTSDEDIGIN 2806
Query: 134 AVVYYSVPED-IPFVVDANTGDIRTNKALDYEKQQLYLERV 173
A+ YS+ + +PF ++ NTGDI ++ L+ E Y RV
Sbjct: 2807 AISRYSIADTALPFTINPNTGDIVISRPLNREDTDRYRIRV 2847
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 72/168 (42%), Gaps = 22/168 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y + D A F ++P T
Sbjct: 2776 SQIFSAYVSENSPLGYTVTRVTTSDEDIGINAISRYSI----ADTALPFTINPNTGDIVI 2831
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
P+ E G + + V I VTDIND P F Y PE + G
Sbjct: 2832 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNTPRFSRPSYYLDCPELTELGS 2891
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
V +V ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 2892 RVTQVSATDPDEGSNGQVFYFIKSKSEYFRINATTGEIFNKQVLKYQN 2939
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 78/170 (45%), Gaps = 29/170 (17%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP---- 75
GA+ R T++QV A D D G + Y LL N D A F L + E +
Sbjct: 2273 GALPR-------TILQVVARDDDQGPNSQLSYVLLGGNEDNA--FALTASGELRVTQSLD 2323
Query: 76 ------------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAV 120
D G L+ T T+NI V DIND P F S Y ++PE G V
Sbjct: 2324 REARDHFVLVVTAADAGSPALTGTGTINIIVDDINDNVPTFASNMYFTAIPEDAPTGTDV 2383
Query: 121 GRVHATDADEGQNAVVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V+A+DAD NAV+ YS + + F ++ +TG I T+ LD E + Y
Sbjct: 2384 LLVNASDADAATNAVISYSIIGGNSQFTINPSTGQIITSALLDRETKDNY 2433
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 73/162 (45%), Gaps = 23/162 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI----QDEGGL--- 82
G L+ + ATD D G G V + L + +D F LDP + I ++E
Sbjct: 599 GTELLVLGATDGDLGDNGTVRFSLQEAESDQ-RLFRLDPVSGRLSTISSLDREEQAFYCL 657
Query: 83 ------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
SST VN+ + DIND +P F + Y + E + G + V V ATD D
Sbjct: 658 LILATDLGSPPQSSTVQVNVSLLDINDNSPVFYPVQYFAHIQENEPGGSYVTTVSATDPD 717
Query: 130 EGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V YS+ + F + A +G I T ALD E++ Y
Sbjct: 718 MGPNGTVKYSISAGDRSRFQIHAKSGVISTKMALDREEKTAY 759
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 38 ATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGGLSSTAT--- 87
ATD D G G+ YR++ N A F LD G + +GGL T
Sbjct: 159 ATDSDIGSNGVDHRSYRIVRGN--EAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQY 216
Query: 88 -------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
VN+ V DIND P F S Y+ VPE G +V +V A D
Sbjct: 217 QLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAAD 276
Query: 128 ADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ADEG NA + Y + E PF +D TG I + LD+E ++ Y
Sbjct: 277 ADEGTNADIRYRLQDEGTPFQMDPETGLITVREPLDFEARRQY 319
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 76/175 (43%), Gaps = 25/175 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD---------- 67
FY A + +++V A+D D G GL+ Y +L N + F++D
Sbjct: 1214 FYQATVSETATNLTQVLRVSASDVDEGNNGLIHYSILKGNEE--RQFSIDRFSGQVTLVG 1271
Query: 68 -------PATEHQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
PA D G L+ST T++I + D ND P F V E + G
Sbjct: 1272 KLDYEATPAYSLLIQAVDSGTVPLNSTCTLSIDILDENDNTPSFPKSTLFVDVLENMRIG 1331
Query: 118 LAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD+D G NA ++Y++ F + NTG I K LD+E Q LY
Sbjct: 1332 ELVSSVTATDSDSGVNADLHYTITGSNNHGTFSISPNTGSIFLAKKLDFETQSLY 1386
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 76/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3212 GTTVIHLNATDADSGANAVIAYTVQSSDSD---LFVIDPNT---GVITTQGFLDFETKQS 3265
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S ATVNI++ N+ P F S Y F V E G AVG V A+
Sbjct: 3266 YHLTVKAFNVPDEEKCSFATVNIQLMGTNEYVPRFVSKLYYFEVSEAAPRGTAVGEVFAS 3325
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F + TG I + LD EK+ ERV L
Sbjct: 3326 DRDMGADGEVHYLIFGNSRKKGFQIHKMTGQIYVSGLLDREKE----ERVSL 3373
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 71/170 (41%), Gaps = 22/170 (12%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------ 68
D + Y + + +V+A DKDSG G + Y + D N+ A F + P
Sbjct: 997 DQISYEVTLSESEPVNSRFFKVQALDKDSGANGEIAYAITDGNSGEA--FGIFPDGQLYI 1054
Query: 69 ATEHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+E +QD LS+T V + + D+ND P F S Y F E Q
Sbjct: 1055 KSELDRELQDRYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQR 1114
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
G VG+V A D D G N V Y+ P F + A TG+I D E
Sbjct: 1115 AGSFVGKVSAVDKDFGPNGEVRYAFEVAQPDFELHAITGEITNTHKFDRE 1164
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 69/161 (42%), Gaps = 20/161 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +ATD DSG +EY LL+ + S +D G + D
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNPAGNKFSIGTIDGEVHLTGELDREEVSNYSLTVVATD 2128
Query: 79 EGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y + E G + +V A D DEG N
Sbjct: 2129 KGQPPLSSSTEVVVMVLDINDNNPVFAQAMYRVQIKENTLTGTDIIQVSAADNDEGTNGQ 2188
Query: 136 VYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V Y + F +D+ TG I K+LD E Y+ V
Sbjct: 2189 VRYGIVGGNTHQEFRIDSVTGAITVAKSLDRETIPAYILTV 2229
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L ATV++ + DIND P+F Y+ +V E L V RV A+D DEG N +++YS+
Sbjct: 1190 LKDQATVHVYMKDINDNAPKFLKDFYQATVSETATNLTQVLRVSASDVDEGNNGLIHYSI 1249
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E+ F +D +G + LDYE Y
Sbjct: 1250 LKGNEERQFSIDRFSGQVTLVGKLDYEATPAY 1281
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 27/177 (15%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH----- 72
Y ++ G ++QV A D D G G V Y ++ NT F +D T
Sbjct: 2158 MYRVQIKENTLTGTDIIQVSAADNDEGTNGQVRYGIVGGNTHQE--FRIDSVTGAITVAK 2215
Query: 73 --------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
Q + + + TV I + D+ND P F+ PY +VPE L
Sbjct: 2216 SLDRETIPAYILTVQATDRGSSPRTDSCTVAITLLDMNDFVPVFELSPYSVNVPENLGAL 2275
Query: 119 --AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ +V A D D+G N+ + Y + ED F + A +G++R ++LD E + ++
Sbjct: 2276 PRTILQVVARDDDQGPNSQLSYVLLGGNEDNAFALTA-SGELRVTQSLDREARDHFV 2331
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1724 AEVEITLQDINDNPPVFPTDTLDLTVEENIGDGSKIMQLTAMDADEGANALVTYALISGA 1783
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ K LD E + Y
Sbjct: 1784 DDSFRIDPESGDLIATKRLDREHRSKY 1810
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 22/159 (13%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQG-- 74
++G L++V A D KD G VEY + LDN+T S + + +Q
Sbjct: 2999 KVGTKLIKVTAVDDKDFGLNSEVEYFVSNGNHLGKFKLDNDTGWISIASSLVSDLNQNFF 3058
Query: 75 ---PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D+G LSS ++I VT+ N PEF ++PE G V V A D
Sbjct: 3059 IRVTAKDKGNPPLSSQVVIHITVTEENYHTPEFSQSHISATIPESHSIGSVVRTVSARDR 3118
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYE 164
D N ++ Y++ E+ F ++++TG + KALDYE
Sbjct: 3119 DTAMNGLISYNISSGNEEGIFAINSSTGVVTLAKALDYE 3157
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 71/159 (44%), Gaps = 20/159 (12%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY-------FNLDPATEHQGP------- 75
G + + ATD DSG G + Y + +++ D + FNL A +++
Sbjct: 1857 GSLVAAILATDDDSGVNGEISYVVEEDDGDGVFFLNPVTGVFNLTRALDYERQQYYILTV 1916
Query: 76 -IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
+D GG +T + DIND P F Y S+ E G V + TDAD+G N
Sbjct: 1917 RAEDGGGQFTTIRAYFNILDINDNPPVFSLSSYSTSLMENLPLGSTVLVFNVTDADDGVN 1976
Query: 134 AVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ + YS+ F VD + G ++ KALD E Q Y
Sbjct: 1977 SQLSYSIASGDSLGQFAVDKH-GVLKALKALDRESQSFY 2014
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV- 140
SS ++I V DIND P F+ P+ + E + V ATD D G N + Y +
Sbjct: 2651 FSSYEKLDITVLDINDNAPAFEEDPFVSEILENLSPRKILTVSATDKDSGPNGQLAYEIV 2710
Query: 141 --PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ F ++ TG+IR+ + LD EK Y
Sbjct: 2711 NGNQESSFTINHATGEIRSIRPLDREKISYY 2741
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
G ++ A VNI V D+ND P F Q++ +V Q G ++ + A D DEG N V Y
Sbjct: 871 GAVTGDAVVNITVKDLNDNAPHFLQAVESIDAVENWQAGHSIFQAKAVDPDEGVNGRVLY 930
Query: 139 SV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
S+ P+++ F ++ G+I LD +E V
Sbjct: 931 SLKQNPKNL-FTINEQNGNISLLGTLDVHAGSYQVEIV 967
Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 67/173 (38%), Gaps = 32/173 (18%)
Query: 23 ARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPATEHQGP 75
A + + G ++ Q KA D D G G V Y L N N + L H G
Sbjct: 902 AVENWQAGHSIFQAKAVDPDEGVNGRVLYSLKQNPKNLFTINEQNGNISLLGTLDVHAGS 961
Query: 76 IQDE--------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
Q E LSS+ + + V D+ND P F + YE ++ E + +V A
Sbjct: 962 YQVEIVASDMGVPQLSSSIILTVYVHDVNDNPPVFDQISYEVTLSESEPVNSRFFKVQAL 1021
Query: 127 DADEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYL 170
D D G N + Y+ + D N+G+ + LD E Q Y+
Sbjct: 1022 DKDSGANGEIAYA-------ITDGNSGEAFGIFPDGQLYIKSELDRELQDRYV 1067
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 69/160 (43%), Gaps = 27/160 (16%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH 72
+ DSL G A DKH + L +KA D++S F + ++ D AS F
Sbjct: 1985 SGDSL--GQFAVDKHGV---LKALKALDRESQSFYNLVIQVHDLPQPPASRF-------- 2031
Query: 73 QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+STA V+I + D+ND P F S P +PE V + ATD D G
Sbjct: 2032 ----------TSTAQVSIILLDVNDNPPMFLS-PKLTYIPENTPIDTVVFKAQATDPDSG 2080
Query: 132 QNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
N+ + Y++ P F + G++ LD E+ Y
Sbjct: 2081 PNSYIEYTLLNPAGNKFSIGTIDGEVHLTGELDREEVSNY 2120
Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N V Y + +
Sbjct: 1515 VTILVTDLNDNVPIFISQNALAADPSAMIGSVLTTIMAADPDEGANGEVEYEIVNGDTDT 1574
Query: 146 FVVDANTGDIRTNKAL 161
F VD +GD+R AL
Sbjct: 1575 FTVDRYSGDLRVASAL 1590
Score = 38.9 bits (89), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 69/175 (39%), Gaps = 22/175 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G V+Y + + ++ LD
Sbjct: 694 YFAHIQENEPGGSYVTTVSATDPDMGPNGTVKYSISAGDRSRFQIHAKSGVISTKMALDR 753
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V + V D D P F Y F V E G VG
Sbjct: 754 EEKTAYQLQIVATDGGNLQSPSQAIVTVTVLDTQDNPPVFSQAAYSFVVFENVALGYHVG 813
Query: 122 RVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V AT D NA + Y + + F ++ TG + T +D E+Q Y RV
Sbjct: 814 SVSATTMD--LNANISYLITTGDQRGMFAMNPVTGQLTTASVIDREEQSFYQLRV 866
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 68/166 (40%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG + Y + +N F++ P T E Q
Sbjct: 1329 RIGELVSSVTATDSDSGVNADLHYTITGSNNHGT--FSISPNTGSIFLAKKLDFETQSLY 1386
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G SST +V I V D ND P F S+ E G +V V A D
Sbjct: 1387 KLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPLGTSVISVTAHD 1446
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + Y++ + +P F +D G I T+ +D E L+
Sbjct: 1447 PDADINGQLSYAIIQQMPRGNHFSIDEVKGTIYTSAEIDREFANLF 1492
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 75 PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQN 133
P + SS A++ I V DIND P F+ Y ++ E G V V ATD D G N
Sbjct: 448 PTAEVQARSSVASLVIFVNDINDHPPVFEQQVYRVNLSEEVPPGSYVSGVSATDGDSGLN 507
Query: 134 AVVYYSV 140
A + YS+
Sbjct: 508 ANLRYSI 514
Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 61/151 (40%), Gaps = 32/151 (21%)
Query: 14 SDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQ 73
+ ++++ A+ D G ++ V A+D D+ ++ Y ++ N S F ++P+T
Sbjct: 2365 ASNMYFTAIPEDA-PTGTDVLLVNASDADAATNAVISYSIIGGN----SQFTINPST--- 2416
Query: 74 GPIQDEGGLSSTATVNIRVT-----------------------DINDKNPEFQSLPYEFS 110
G I L N + D+ND P FQ PY
Sbjct: 2417 GQIITSALLDRETKDNYTLVVVASDAGSPESLSSSTSVLVSVTDVNDNPPRFQHHPYVTH 2476
Query: 111 VPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
+P G V V TDAD G N+ ++YS+
Sbjct: 2477 IPSPTPPGSFVFAVTVTDADIGPNSELHYSL 2507
>gi|354482507|ref|XP_003503439.1| PREDICTED: cadherin-18-like [Cricetulus griseus]
Length = 790
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ I D G + K L+YEK++ Y
Sbjct: 289 KIKANDADTGSNADMTYSITNGDGIGVFSISTDKDTREGILSLKKPLNYEKKKSY 343
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 66/144 (45%), Gaps = 20/144 (13%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYF--------NLDPATEHQGPIQDEGGLSSTATVN 89
+TDKD+ + G++ + N SY +LD H GP +D +
Sbjct: 319 STDKDT-REGILSLKKPLNYEKKKSYTLNIEGANTHLDFRFSHLGPFKD------ATMLK 371
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYY---SVPEDIP 145
I V D+ D+ P F Y V E + G VG V A D D + V Y+ S ED
Sbjct: 372 IIVGDV-DEPPHFSMPSYVMDVYENAKVGTIVGTVLAQDPDSANSLVRYFINRSAEEDRF 430
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DANTG I+T+K LD E+ Y
Sbjct: 431 FNIDANTGTIKTSKVLDREETPWY 454
Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|145587090|ref|NP_001074768.1| cadherin 18 precursor [Mus musculus]
Length = 790
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ I D G + K L+YEK++ Y
Sbjct: 289 KIKANDADTGSNADMTYSITNGDGIGVFSISTDKDTREGILSLKKPLNYEKKKSY 343
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 20/144 (13%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYF--------NLDPATEHQGPIQDEGGLSSTATVN 89
+TDKD+ + G++ + N SY +LD H GP +D +
Sbjct: 319 STDKDT-REGILSLKKPLNYEKKKSYTLNIEGANTHLDFRFSHLGPFKD------ATMLK 371
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYY---SVPEDIP 145
+ V D+ D+ P F Y V E + G VG V A D D + V Y+ S E+
Sbjct: 372 VIVGDV-DEPPLFSMPSYVMEVYENAKIGTIVGTVLAQDPDSANSLVRYFINHSTEEERF 430
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DANTG I+T+K LD E+ Y
Sbjct: 431 FNIDANTGTIKTSKVLDREETPWY 454
Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|440898521|gb|ELR50004.1| Cadherin-12, partial [Bos grunniens mutus]
Length = 619
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 85/177 (48%), Gaps = 37/177 (20%)
Query: 30 GVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---------------- 70
G ++QVKATD D +G V Y +L YF++DP T
Sbjct: 1 GAYVLQVKATDADDPTYGNSARVVYSILQ----GQPYFSIDPKTGVIRTALPNMDREVKE 56
Query: 71 EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRV 123
++Q IQ + GGL+ T VNI +TD+ND P F + VPE G A+GR+
Sbjct: 57 QYQVLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPESSPVGSAIGRI 116
Query: 124 HATDADEGQNAVVYYS-VPED----IPFVVDANT--GDIRTNKALDYEKQQLYLERV 173
A D D GQNA + Y+ VP D V D +T G I+ K LD+E ++ Y +V
Sbjct: 117 RAVDPDFGQNAEIEYNIVPGDGGNLFDIVTDEDTQEGVIKLKKPLDFETKKAYTFKV 173
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 60/137 (43%), Gaps = 6/137 (4%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH-QGPIQDEGGLSSTATVNIRVTDIN 96
TD+D+ + + + LD T A F ++ + H G TATV I V D+
Sbjct: 145 VTDEDTQEGVIKLKKPLDFETKKAYTFKVEASNVHLDHRFHSAGPFKDTATVKISVLDV- 203
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY---YSVPEDIPFVVDANT 152
D+ P F Y V E G +G V A D D G +AV Y + D F +DA
Sbjct: 204 DEPPVFSKPLYTMEVYEDTPVGTIIGAVTAQDLDVGSSAVRYLIDWKSDGDSYFTIDATE 263
Query: 153 GDIRTNKALDYEKQQLY 169
G I TN+ LD E Y
Sbjct: 264 GTIATNELLDRESTAQY 280
>gi|432896618|ref|XP_004076349.1| PREDICTED: protocadherin-16-like [Oryzias latipes]
Length = 3296
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 91/180 (50%), Gaps = 21/180 (11%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-----------ASYFN 65
++YG + +++ V L VKATD DSG G +EY++ + D ++
Sbjct: 1753 MWYG-LEVPENQPAVELCFVKATDPDSGPGGELEYKIAAGDPDGDFQLHSRTGALSTSHG 1811
Query: 66 LDPATEHQGPIQ----DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
LD + + ++ D G LS+TATV ++V D+ND +P F Y V E ++G
Sbjct: 1812 LDREKKPKYTLEVVAVDRGSPALSATATVEVKVLDVNDNSPVFSKNSYTVEVLENAEEGY 1871
Query: 119 AVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
V +V ATD DEG N + Y + + D F VD +TG I T LD EK Y RVF +
Sbjct: 1872 QVLQVSATDVDEGLNGKILYFLSQEADGAFAVDEDTGRITTAAPLDREKLASYNFRVFAV 1931
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 80/167 (47%), Gaps = 24/167 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPI- 76
+G ++ V A D D G+ G V YR+ N A F+L P T E Q
Sbjct: 1558 VGFVILHVMAHDADEGENGRVSYRIQSGNN--AGRFSLSPNTGSLSILKALDREEQEVFN 1615
Query: 77 -----QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D G LS++ + ++V D+ND+ P FQ + V E + G V +V ATD
Sbjct: 1616 LTIVAEDHGIPQLSTSQVLCVQVIDVNDEAPMFQQAEFGTHVMENKGPGTTVLKVTATDR 1675
Query: 129 DEGQNA-VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
D+G N + Y V ED FV++ TG I T K LD E Q Y+ V+
Sbjct: 1676 DQGSNGHITYGGVTED-GFVINPLTGVITTTKELDAELQNHYVLTVY 1721
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 71/162 (43%), Gaps = 30/162 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------EHQGP-- 75
G ++QV A DKD G G V Y LL +F++DP T P
Sbjct: 486 GSFVLQVTARDKDQGPNGDVRYSLLKGK----KWFSIDPITGIITTATALDFESEPAPSV 541
Query: 76 --IQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
I +GG LSSTA V+I V D+ND P F S Y SV E G V ATD D
Sbjct: 542 TVIATDGGRPPLSSTAKVDIVVQDVNDNAPVFSSNFYNVSVKENTPAGTCFLEVSATDED 601
Query: 130 EGQNAVVYYSV------PEDIPFVVDANTGDIRTNKALDYEK 165
G + Y++ PF ++ TG + T ALD ++
Sbjct: 602 RGSFGTITYALTLKSGGTVQTPFTINKQTGQLCTASALDRDE 643
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 79/182 (43%), Gaps = 27/182 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------E 71
+G + G T+++V ATD+D G G + Y + + F ++P T E
Sbjct: 1653 FGTHVMENKGPGTTVLKVTATDRDQGSNGHITYGGVTEDG-----FVINPLTGVITTTKE 1707
Query: 72 HQGPIQD---------EGGLS---STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
+Q+ +GGL + A V + V D+ND P F + Y VPE Q +
Sbjct: 1708 LDAELQNHYVLTVYARDGGLPPNFAKAVVRVEVQDVNDNAPVFAKMWYGLEVPENQPAVE 1767
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
+ V ATD D G + Y + P F + + TG + T+ LD EK+ Y V +
Sbjct: 1768 LCFVKATDPDSGPGGELEYKIAAGDPDGDFQLHSRTGALSTSHGLDREKKPKYTLEVVAV 1827
Query: 177 SK 178
+
Sbjct: 1828 DR 1829
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 23/169 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLDPAT---- 70
S FY ++ G ++V ATD+D G FG + Y L L + + F ++ T
Sbjct: 575 SNFYNVSVKENTPAGTCFLEVSATDEDRGSFGTITYALTLKSGGTVQTPFTINKQTGQLC 634
Query: 71 ------EHQG--------PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQ 115
+G D GGLSS V ++V DIND P F + Y S+
Sbjct: 635 TASALDRDEGLEKYDLTVTATDGGGLSSAVGVRVKVMDINDNRPTFYPVLYTVSLSTHSA 694
Query: 116 DGLAVGRVHATDADEGQNA-VVYYSVPEDIP--FVVDANTGDIRTNKAL 161
G +V +V A D D G+N + Y +VP F ++ +TG I +++L
Sbjct: 695 PGTSVVKVTANDPDAGENGRITYRTVPGGSSPFFTLNKDTGVISLSRSL 743
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 78/172 (45%), Gaps = 30/172 (17%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EH 72
R+ G +V ATD+D+G + YRLL A +F ++ T E
Sbjct: 1123 RENLVAGTGFGRVSATDRDAGLNARLTYRLLH----ADKHFQINSQTGEISTRLALDREQ 1178
Query: 73 QGPIQ-----DEGGL---SSTATVNIRVTDINDKNPEFQSLPYE----FSVPEG-QDGLA 119
Q Q +GG S+T T +I V D ND P F + + F + EG G
Sbjct: 1179 QSSYQLFVVVQDGGTPPRSATGTAHISVLDENDHAPTFTHVRPDTERMFEIIEGLPSGTM 1238
Query: 120 VGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
VG V A D DEG+N VYYS+ F ++ NTG+++T L + ++ Y
Sbjct: 1239 VGSVAAKDPDEGENGTVYYSLSGSRVERFSLNPNTGELKTASPLRWAERAEY 1290
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNA-VVYY 138
G + +ATV + VTD ND +P +V E G GRV ATD D G NA + Y
Sbjct: 1092 GRTGSATVRVTVTDENDNSPRLSQERVFLAVRENLVAGTGFGRVSATDRDAGLNARLTYR 1151
Query: 139 SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ D F +++ TG+I T ALD E+Q Y
Sbjct: 1152 LLHADKHFQINSQTGEISTRLALDREQQSSY 1182
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 25/142 (17%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------------------ 77
+ A D D+G FG ++Y +++ + F ++ ++ G ++
Sbjct: 2716 LHAIDHDTGVFGQLKYYMMERSGSGRDSFVIE---QNSGEVRSKIPFDFEKINSFNFVAV 2772
Query: 78 --DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNA 134
D G S+T TV + VT ++ +P F S + F VPEG + G ++G+V A D D G +
Sbjct: 2773 AVDSGNHSATVTVQVFVTGEDEYDPLFTSTDFAFEVPEGAKKGQSIGQVLARDEDGGVDG 2832
Query: 135 VVYYSVPEDIP-FVVDANTGDI 155
+V YS+ P F V+ TG I
Sbjct: 2833 IVLYSLLPSSPYFDVNKTTGVI 2854
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV----- 140
T+ + VTDIND P F Y + E G ++ +V A D DEG N +V Y +
Sbjct: 238 TLEVTVTDINDHAPVFNQSRYHAIISESLPQGSSILQVFAADEDEGDNGLVLYEINRRQS 297
Query: 141 -PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
PE FV+D +G I N+ LDYE ++++
Sbjct: 298 DPERY-FVIDLKSGVITLNRPLDYELKRVH 326
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 8/116 (6%)
Query: 59 DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DG 117
+ S +NL +G Q SS+ I + D+ND P F Y ++ EG G
Sbjct: 2552 ETKSLYNLTVVVSDRGVPQR----SSSVAALITIGDVNDNPPVFSRPEYTVALSEGAVSG 2607
Query: 118 LAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ R+ ATD D NA V Y++ E F +D TG +R +ALD E Q ++
Sbjct: 2608 TEIIRLTATDPDSTPNAEVQYTISSGDEMNLFSIDQWTGALRLQRALDREHQSTHV 2663
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 32/161 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------------ 77
G ++++V A D D+G+ G + YR + + + +F L+ T G I
Sbjct: 696 GTSVVKVTANDPDAGENGRITYRTVPGGS--SPFFTLNKDT---GVISLSRSLHSKANTV 750
Query: 78 --------DEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHAT 126
D GL++ A VN+ + + +P F+ Y F+V E G AVG V A
Sbjct: 751 ISMVITAVDGDGLTAPVNARVNVSIVGGSTSSPVFEQAQYFFTVSEDVLRGTAVGVVRAA 810
Query: 127 DADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
G + +YYS+ P F VD+ +G IRT LD+E
Sbjct: 811 -TKTGVSKGIYYSISSGDPDGYFTVDSTSGTIRTALPLDHE 850
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV 140
L + ++ I+VTD+ND P F Y ++PE G V +V A D D+G N V YS+
Sbjct: 450 LRAESSFTIQVTDVNDNPPLFDQQAYRQTIPEVVYPGSFVLQVTARDKDQGPNGDVRYSL 509
Query: 141 PEDIP-FVVDANTGDIRTNKALDYEKQ 166
+ F +D TG I T ALD+E +
Sbjct: 510 LKGKKWFSIDPITGIITTATALDFESE 536
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 23/104 (22%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----EHQGPIQDE----- 79
G ++ V ATD+DSG+ G V YR++ + + F +DP+ H+ E
Sbjct: 2385 GSAVITVTATDRDSGENGRVNYRVMSSTQEG---FYIDPSNGTLFINHRAEFDPERPSVN 2441
Query: 80 -------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
GG LSS TV + ++DIND P F Y V E
Sbjct: 2442 IVIEASDGGSPALSSLTTVQVHISDINDNAPVFHQSEYRAMVSE 2485
Score = 42.4 bits (98), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDI 144
A + I V DIND P F Y+ S+PE G AV V ATD D G+N V Y V
Sbjct: 2353 ANITIVVEDINDNAPLFTHDLYQISLPEHTPPGSAVITVTATDRDSGENGRVNYRVMSST 2412
Query: 145 P--FVVDANTGDIRTNKALDYEKQQ 167
F +D + G + N +++ ++
Sbjct: 2413 QEGFYIDPSNGTLFINHRAEFDPER 2437
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 75/184 (40%), Gaps = 32/184 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQ--------- 77
G + V A D D G+ G V Y L + + F+L+P T + P++
Sbjct: 1236 GTMVGSVAAKDPDEGENGTVYYSLSGSRVE---RFSLNPNTGELKTASPLRWAERAEYTF 1292
Query: 78 -----DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
D G GLSST + I+V + P+ L +V EG G +G V D
Sbjct: 1293 TLTAADHGTPGLSSTCQIRIQVISSSRSIPKPNVLSMTLNVVEGTAPGSIIGSVGQVDKP 1352
Query: 130 EG---QNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQ---LYLERVFLISKFA 180
E + V Y V D F+VD GD+ + LDYEK L++E F
Sbjct: 1353 ESNVLEGQVTYLVVDGTDRDGTFMVDRLRGDVYLVRELDYEKGSSYTLHVEVSDFSKAFP 1412
Query: 181 TSYL 184
SYL
Sbjct: 1413 NSYL 1416
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 31/162 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G ++++ ATD DS V+Y + ++ D + F++D T EHQ
Sbjct: 2607 GTEIIRLTATDPDSTPNAEVQYTI--SSGDEMNLFSIDQWTGALRLQRALDREHQSTHVV 2664
Query: 76 -IQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA----VGRVHATDA 128
IQ D G + V + V D+ND +P F P E Q+ L V +HA D
Sbjct: 2665 IIQATDGQGYFALVPVIVDVKDVNDNHPYF---PVETLTATIQENLPANSPVTVLHAIDH 2721
Query: 129 DEGQNAVVYYSVPEDI-----PFVVDANTGDIRTNKALDYEK 165
D G + Y + E FV++ N+G++R+ D+EK
Sbjct: 2722 DTGVFGQLKYYMMERSGSGRDSFVIEQNSGEVRSKIPFDFEK 2763
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 60/146 (41%), Gaps = 24/146 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------- 71
Y A+ + G +++QV A D+D G GLV Y + +D YF +D +
Sbjct: 258 YHAIISESLPQGSSILQVFAADEDEGDNGLVLYEINRRQSDPERYFVIDLKSGVITLNRP 317
Query: 72 --------HQGPIQDEGGLS----STATVNIRVTDINDKNPE----FQSLPYEFSVPEG- 114
H+ +Q S + A V I V D ND P F S + EG
Sbjct: 318 LDYELKRVHELVVQARDNASQPEVTNAFVTIHVRDFNDNQPTMTIIFLSEDGSPRISEGA 377
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV 140
Q G V R+ TD D G+ A V S+
Sbjct: 378 QPGQYVARISVTDPDYGEYANVNVSL 403
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 24/164 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGP 75
Y + E G ++QV ATD D G G + Y L D A F +D T P
Sbjct: 1859 YTVEVLENAEEGYQVLQVSATDVDEGLNGKILY-FLSQEADGA--FAVDEDTGRITTAAP 1915
Query: 76 IQDEG-----------------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
+ E ++S+A V + + D+ND P F P V +
Sbjct: 1916 LDREKLASYNFRVFAVDLSPSVPINSSAQVKVTILDVNDNAPFFIQDPLIIEVSSRRSQR 1975
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKAL 161
+ + A D D G N V+Y + F +++ TG+I+ + L
Sbjct: 1976 VLATMKAEDKDFGANGSVFYRFATPVKGFSINSLTGEIQATEPL 2019
Score = 39.3 bits (90), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 89 NIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP-- 145
N+ + D+ND P FQ Y + E Q + + +V A D D+GQN V YS+
Sbjct: 2151 NLVLQDVNDNLPRFQLQNYVAFMKEAQGYEMPIIQVVAEDVDQGQNGQVTYSIQSSSMSG 2210
Query: 146 -FVVDANTGDIRTNKALDYE 164
F +D TG I T +D E
Sbjct: 2211 LFKIDPVTGSITTTAIMDRE 2230
>gi|348561957|ref|XP_003466777.1| PREDICTED: cadherin-18-like [Cavia porcellus]
Length = 751
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ I D G I K L+YEK++ Y
Sbjct: 289 KIKANDADIGSNADMTYSIINGDGIGIFSISTDKDTREGIISLKKPLNYEKKKSY 343
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 70/146 (47%), Gaps = 9/146 (6%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY-FNLDPATEHQG-PIQDEGGLSSTAT 87
G+ + + +TDKD+ + G++ + N SY N++ A H + G
Sbjct: 312 GIGIFSI-STDKDT-REGIISLKKPLNYEKKKSYTLNIEGANTHLDFRVSQLGPFKDATM 369
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVY---YSVPED 143
+ I V D+ D+ P F Y V E + G VG V A D D + V Y YSV ED
Sbjct: 370 LKIIVGDV-DEPPLFSMPSYIMEVYENAKIGTTVGTVLAQDPDSANSLVRYFINYSVEED 428
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLY 169
F +DANTG I+T+K LD E+ Y
Sbjct: 429 RFFNIDANTGTIKTSKILDREETPWY 454
Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|348540000|ref|XP_003457476.1| PREDICTED: hypothetical protein LOC100693831 [Oreochromis
niloticus]
Length = 1656
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 85/179 (47%), Gaps = 29/179 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV ATD D +G +L+ YF++DP T
Sbjct: 591 YSATVPEMANIGTSIIQVTATDADDPTYG-NSAKLVYTLVQGQQYFSVDPQTGILRTAVP 649
Query: 71 EHQGPIQDE--------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
+ QD+ GGLS T TV +R+TD+ND P F + FSV E
Sbjct: 650 DMDRETQDQYLVVLQAKDMGGHLGGLSGTTTVTVRLTDVNDNPPRFTQSMWSFSVSELAI 709
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRT-NKALDYEKQQLY 169
G +GR+ ATDAD G+NA + Y++ E D + N + T NKA+DYE + Y
Sbjct: 710 PGAEIGRISATDADLGENAKLEYTILEGESGDTFNITGVNQEAVITLNKAVDYESRSSY 768
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 68/141 (48%), Gaps = 24/141 (17%)
Query: 50 EYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF 109
EYRL+ TD + L+P+++ IRV DIND P F PY
Sbjct: 550 EYRLIATATDRQTDRALEPSSQ----------------FIIRVQDINDNPPVFDEGPYSA 593
Query: 110 SVPEGQD-GLAVGRVHATDADE---GQNA-VVYYSVPEDIPFVVDANTGDIRTNKA-LDY 163
+VPE + G ++ +V ATDAD+ G +A +VY V F VD TG +RT +D
Sbjct: 594 TVPEMANIGTSIIQVTATDADDPTYGNSAKLVYTLVQGQQYFSVDPQTGILRTAVPDMDR 653
Query: 164 EKQQLYLERVFLISKFATSYL 184
E Q YL V L +K +L
Sbjct: 654 ETQDQYL--VVLQAKDMGGHL 672
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 68/177 (38%), Gaps = 44/177 (24%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDN-----------NTDAASYFN------------- 65
G + ++ ATD D G+ +EY +L+ N +A N
Sbjct: 711 GAEIGRISATDADLGENAKLEYTILEGESGDTFNITGVNQEAVITLNKAVDYESRSSYSF 770
Query: 66 --------LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QD 116
+DP +GP +D A++ + V D D+ P F Y V E
Sbjct: 771 SVEVLNPIVDPRFLRRGPFKDR------ASIRVAVLDA-DEPPRFSRARYHMDVSENCPP 823
Query: 117 GLAVGRVHATDADEGQNAVVYYSV-PEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
VGRV A D D G + +S+ P+ P F + TG I T LD E++ +
Sbjct: 824 ACTVGRVSAVDPDTGLTNNIRFSIDPQSDPEALFRITPETGLITTAMELDREREHWH 880
>gi|432930275|ref|XP_004081407.1| PREDICTED: cadherin-6-like [Oryzias latipes]
Length = 795
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 87/188 (46%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G +++QV A D D +G V Y +L YF++DP T
Sbjct: 167 YLARVPEMSDIGTSVIQVTAIDADDATYGNSAKVVYSILQ----GQPYFSVDPETGLIKT 222
Query: 71 -----------------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
+ + GGLS TATV+I + D+ND P F YEF VPE
Sbjct: 223 ALSGMDREVKENYLVVIQAKDMAGQMGGLSGTATVSITLADVNDNPPRFTKTLYEFRVPE 282
Query: 114 GQD-GLAVGRVHATDADEGQNAVV-YYSVPEDIPFVVD------ANTGDIRTNKALDYEK 165
++ G +VG + A DAD GQNA + Y + D P + D G I K LD+EK
Sbjct: 283 SRELGSSVGAIRAMDADIGQNAEMDYRIIGSDGPGMFDIISNRSTQEGVIVLRKPLDFEK 342
Query: 166 QQLYLERV 173
++ Y RV
Sbjct: 343 KRQYSLRV 350
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F PY VPE D G +V +V A DAD+ G +A V YS+ + P
Sbjct: 150 IKIHDINDNEPRFTRDPYLARVPEMSDIGTSVIQVTAIDADDATYGNSAKVVYSILQGQP 209
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLYL 170
F VD TG I+T +D E ++ YL
Sbjct: 210 YFSVDPETGLIKTALSGMDREVKENYL 236
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H +D+D G +V Y E F +D N+GDI K LD E++ Y+
Sbjct: 71 GTDMQYVGKLH-SDSDRGDGSVKYVLTGEGAGTLFKIDENSGDIHATKRLDREEKAFYI 128
>gi|162312016|gb|ABX84114.1| hedgling [Nematostella vectensis]
Length = 3480
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 81/169 (47%), Gaps = 30/169 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTAT- 87
+G T++ V ATD DSG G +EYRL+ N A FN+D + G I+ L T
Sbjct: 1101 IGSTVVTVTATDLDSGPRGRLEYRLISGNVKGA--FNIDA---NSGSIRVSSELDRETTP 1155
Query: 88 ---------------------VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHA 125
V I + DIND +P FQ PY F V E G +G+V A
Sbjct: 1156 SYSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIFQG-PYVFRVSESSSPGHQIGQVAA 1214
Query: 126 TDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLERV 173
TDAD+ N V Y++ ++ F ++ +TG I LDYEK+ Y+ V
Sbjct: 1215 TDADDSSNGDVRYALSDNTDVFSINTSTGLITLKTQLDYEKKTQYMVTV 1263
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 80/174 (45%), Gaps = 29/174 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLL--------DNNT------------DAASYFNLDP 68
+G + ++ A D D G G+V YR+L DN T + ++Y
Sbjct: 2342 VGAIIAELLAVDPDLGTGGVVSYRILTRQTEFTIDNTTGVITLAQPLDRENKSTYDLAIQ 2401
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
A +H P Q +S+ T+ + V DIND P S SV E Q V R+ A+D
Sbjct: 2402 ARDHGTPPQ-----ASSITIRVTVIDINDHRPLINSSSLRGSVRENQPKETHVMRILASD 2456
Query: 128 ADEGQNAVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
AD G NA + +S+ + F +D TGDI T LD E+Q +Y R+ + K
Sbjct: 2457 ADTGLNAELTFSLLSNEHKSVFTLDNTTGDISTKVPLDREQQAVYTLRIGVADK 2510
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 74/162 (45%), Gaps = 23/162 (14%)
Query: 27 HELGVTLMQVKATDKDSGKFGLVEYRLLDN------NTDAA-----SYFNLDPATEHQGP 75
H++G QV ATD D G V Y L DN NT + + + T++
Sbjct: 1207 HQIG----QVAATDADDSSNGDVRYALSDNTDVFSINTSTGLITLKTQLDYEKKTQYMVT 1262
Query: 76 IQDEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADE 130
+ + G SS V + V D+ND P+F Y +V E G+AV V ATDAD
Sbjct: 1263 VTAKDGGTPSRSSLTVVKVMVDDVNDNPPQFAKSLYTCTVGENLAAGVAVCYVTATDADS 1322
Query: 131 GQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G N + YS+ E++ F +D TG+I T LD E Y
Sbjct: 1323 GANGKISYSILSGNENMAFAMDRFTGEITTRVPLDRETIASY 1364
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 75/167 (44%), Gaps = 33/167 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------ 82
+G + Q+ A D D G + Y L+ +T SYF +D QG I+ +G
Sbjct: 788 VGSIVRQLTAVDLDVGINARLSYSLVSGDT---SYFTVD----SQGVIRTKGAFDRETKA 840
Query: 83 ----------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHA 125
S ATV I + D+ND P F S Y SV E G A+ V A
Sbjct: 841 SYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQYTASVDEDVAIGAAMVTVTA 900
Query: 126 TDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
+D D G NA + YS + F +DA TG + +++LD+E++ Y
Sbjct: 901 SDKDNGNNADLRYSFTSGNTNHAFTLDAVTGVVTVSRSLDFEQRSSY 947
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 79/181 (43%), Gaps = 39/181 (21%)
Query: 20 GAMARDKHE---LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------ 70
G+ A+ HE +G T+ +V ATD+D G+ V Y L +T S F ++PAT
Sbjct: 1710 GSYAKSLHENLPIGQTVAKVTATDRDEGENAKVTYELSVGDT---SKFEVNPATGLVTTK 1766
Query: 71 ------------------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
+H P Q S+ A + + + D+ND +P+F Y +V
Sbjct: 1767 RPLDREDQASYSLRVTAMDHGKPSQ-----SAVAAITLTINDLNDNSPQFSQSKYTLTVT 1821
Query: 113 EGQ-DGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQL 168
E +G + RV A+D D G N V YS+ F +D+ TG I +D E
Sbjct: 1822 ENTANGSNILRVLASDPDAGANGRVTYSIISGNHGNAFRIDSTTGRITVVGVVDREALAS 1881
Query: 169 Y 169
Y
Sbjct: 1882 Y 1882
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 75/174 (43%), Gaps = 25/174 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G ++ V A+DKD+G + Y NT+ A F LD T
Sbjct: 881 YTASVDEDVAIGAAMVTVTASDKDNGNNADLRYSFTSGNTNHA--FTLDAVTGVVTVSRS 938
Query: 71 ---EHQG------PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGL 118
E + + D G L+ T+ + I V DIND P F Y+ V E G
Sbjct: 939 LDFEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAYQSRVKENTPAGT 998
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V +V ATD D N + + + +D F +D +TG I K+ DYE + Y
Sbjct: 999 QVIQVSATDRDSSTNGALVFGIIKGNDDGVFTIDGSTGIISIAKSPDYENKTRY 1052
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV-PEDIPF 146
V I V D ND PEF Y F++ E V V ATD D G NA + YS+ + F
Sbjct: 557 VVIDVKDENDNAPEFPLNSYVFNIRENTPAAQVAIVTATDRDSGTNAAITYSLFSGENKF 616
Query: 147 VVDANTGDIRTNKALDYEKQQLYLERV 173
++++ TG+IRT LD+E + Y R+
Sbjct: 617 MMNSKTGEIRTVTPLDHETKDSYTMRI 643
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 71/162 (43%), Gaps = 24/162 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGPIQDEGGLS--- 83
G +++V A+D D+G G V Y ++ N A F +D T G + E S
Sbjct: 1827 GSNILRVLASDPDAGANGRVTYSIISGNHGNA--FRIDSTTGRITVVGVVDREALASYNL 1884
Query: 84 -------------STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
STA V I V D ND +P F S + + EG G V V ATD D
Sbjct: 1885 TISAKDSGVPPWVSTAFVAITVADENDNSPIFASNETSYGIDEGVSIGSRVAVVTATDRD 1944
Query: 130 EGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
EG NA V+YS+ + F ++A G + K ++ E Y
Sbjct: 1945 EGSNAQVFYSIVRGDTSAFAINAMNGVLTVKKEINRETVPTY 1986
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 72/170 (42%), Gaps = 26/170 (15%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QG 74
Y + GV + V ATD DSG G + Y +L N + A F +D T +
Sbjct: 1297 LYTCTVGENLAAGVAVCYVTATDADSGANGKISYSILSGNENMA--FAMDRFTGEITTRV 1354
Query: 75 PI-------------QDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DG 117
P+ D+G L + TVNI + D ND P F P F++ E G
Sbjct: 1355 PLDRETIASYSLTINADDGSLVRFMAATTVNISIADENDNQPTFTG-PSRFNISEDSPTG 1413
Query: 118 LAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
VG++ ATD D G N V Y++ + F +D +G + LD E
Sbjct: 1414 TRVGQLTATDRDIGPNGAVTYAIISGNQGNSFQLDPRSGILSVRSTLDRE 1463
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY--SVPEDIPF 146
IRV D+ND P F Y S+ E G V +V ATD DEG+NA V Y SV + F
Sbjct: 1695 IRVLDVNDNAPVFNPGSYAKSLHENLPIGQTVAKVTATDRDEGENAKVTYELSVGDTSKF 1754
Query: 147 VVDANTGDIRTNKALDYEKQQLYLERV 173
V+ TG + T + LD E Q Y RV
Sbjct: 1755 EVNPATGLVTTKRPLDREDQASYSLRV 1781
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 24/171 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A R+ ++++V A+D+DS FG + Y ++ + F++D +
Sbjct: 2127 YTASVRENSPTSTSVVKVSASDRDS--FGSLSYSIVGGKD--SDKFSIDQRSGIISTADV 2182
Query: 71 ---------EHQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
Q + D G LS+ V I++ D ND +P+F S Y S+ E +
Sbjct: 2183 LDRELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKFDSSSYSSSILENSAPSS 2242
Query: 120 VG-RVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ ATDADEG NA + Y++ + F++ A++G I + LD E+ +Y
Sbjct: 2243 FSFKLAATDADEGTNARITYNLSRNDAFMIGASSGVITNVRKLDREQVSIY 2293
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 73/174 (41%), Gaps = 25/174 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE----HQG 74
Y + ++ G ++QV ATD+DS G + + ++ N D F +D +T +
Sbjct: 986 YQSRVKENTPAGTQVIQVSATDRDSSTNGALVFGIIKGNDDGV--FTIDGSTGIISIAKS 1043
Query: 75 P-------------IQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGL 118
P +D G TA V I + D+ND +P F Y +PE G
Sbjct: 1044 PDYENKTRYDLTVQARDRGVPVKYDTAQVTIFIEDVNDHSPVFSPSNYSKQIPESTVIGS 1103
Query: 119 AVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD D G + Y + F +DAN+G IR + LD E Y
Sbjct: 1104 TVVTVTATDLDSGPRGRLEYRLISGNVKGAFNIDANSGSIRVSSELDRETTPSY 1157
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 78/172 (45%), Gaps = 21/172 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ----------- 77
+G + V ATD+D G V Y ++ +T A + ++ + I
Sbjct: 1931 IGSRVAVVTATDRDEGSNAQVFYSIVRGDTSAFAINAMNGVLTVKKEINRETVPTYTLTI 1990
Query: 78 ---DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEG 131
D G ++S + + V D+ND P F S Y SV E +V V A D+D G
Sbjct: 1991 RASDRGSPMMTSDKELTVVVNDVNDNPPVFNSQSYIGSVRENSAQSTSVLTVAADDSDVG 2050
Query: 132 QNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY-LERVFLISKF 179
NAV+ YS+ ++ F +++ +G I T LD+E++ Y LE SK+
Sbjct: 2051 ANAVLRYSIISGNDEKRFKINSTSGVIMTTTPLDFEEKSQYGLEVTATDSKY 2102
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 69/167 (41%), Gaps = 35/167 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------------------- 68
G + Q+ ATD+D G G V Y ++ N + F LDP
Sbjct: 1413 GTRVGQLTATDRDIGPNGAVTYAIISGN--QGNSFQLDPRSGILSVRSTLDRETIPSYTL 1470
Query: 69 ---ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVH 124
A++ P Q S TA++++ V D+ND P F+ + + E V +V
Sbjct: 1471 VVKASDAGSPQQ-----SITASIHVSVLDVNDNAPRFEKSLFSGEIREDASVHSTVLQVK 1525
Query: 125 ATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
D DEG N + S+ + F +D+ TG + + LDYE Y
Sbjct: 1526 VEDKDEGSNGAITLSLSGEGSDNFTIDS-TGFVLSKTPLDYETTAAY 1571
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 73/170 (42%), Gaps = 17/170 (10%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL----DNNTDAASYFNLD---- 67
SLF G + R+ + T++QVK DKD G G + L DN T ++ F L
Sbjct: 1505 SLFSGEI-REDASVHSTVLQVKVEDKDEGSNGAITLSLSGEGSDNFTIDSTGFVLSKTPL 1563
Query: 68 -----PATEHQGPIQDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEG-QDGLA 119
A + +D G S +AT +++T ++ND P F S S+PE
Sbjct: 1564 DYETTAAYQLTVTARDGGSPSKSATAQVKITIINVNDNVPSFVSPAQVTSIPEDVAINTH 1623
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V +++ATD+D F +D ++G I K LD E Y
Sbjct: 1624 VVKLNATDSDGTPLTFDIVEGNAGSSFKIDQSSGLISVAKRLDRETTANY 1673
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 69/175 (39%), Gaps = 16/175 (9%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----LDPA 69
+S Y R+ +++ V A D D G ++ Y ++ N + N +
Sbjct: 2021 NSQSYIGSVRENSAQSTSVLTVAADDSDVGANAVLRYSIISGNDEKRFKINSTSGVIMTT 2080
Query: 70 TEHQGPIQDEGGLSSTAT---------VNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLA 119
T + + GL TAT V IRV ++ND P F Y SV E +
Sbjct: 2081 TPLDFEEKSQYGLEVTATDSKYTAKTNVTIRVINLNDITPAFTQQNYTASVRENSPTSTS 2140
Query: 120 VGRVHATDADE-GQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V +V A+D D G + + F +D +G I T LD E LY +V
Sbjct: 2141 VVKVSASDRDSFGSLSYSIVGGKDSDKFSIDQRSGIISTADVLDRELVSLYAIQV 2195
Score = 39.3 bits (90), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 27/144 (18%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG------P 75
+M++ A+D D+G + + LL N + S F LD T E Q
Sbjct: 2449 VMRILASDADTGLNAELTFSLLSN--EHKSVFTLDNTTGDISTKVPLDREQQAVYTLRIG 2506
Query: 76 IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQ 132
+ D+G LSS A V I V D +D P FQ Y ++ E G ++ +V A D D +
Sbjct: 2507 VADKGNPSLSSVADVIIDVIDEDDNCPRFQPTEYNVTISESLPRGASIVQVTARDIDGDK 2566
Query: 133 NAVVYYSVPEDIP---FVVDANTG 153
+ Y++ P F +D+ TG
Sbjct: 2567 D--TSYAIKSMTPSGGFTIDSKTG 2588
Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE 142
S ATV I+VTD+ND P F YE+ + + + V ATD D G N VV + + E
Sbjct: 2641 SLATVTIQVTDVNDNAPSFSRDSYEYDFND-VTTVNLLSVRATDLDAGVNGVVKFRLAE 2698
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV-PEDIPF 146
V+IRV D ND P F S G + + A D D G VV Y + F
Sbjct: 2314 VHIRVQDENDNAPRFVSSGNCNVSENAVVGAIIAELLAVDPDLGTGGVVSYRILTRQTEF 2373
Query: 147 VVDANTGDIRTNKALDYEKQQLY 169
+D TG I + LD E + Y
Sbjct: 2374 TIDNTTGVITLAQPLDRENKSTY 2396
>gi|195437548|ref|XP_002066702.1| GK24627 [Drosophila willistoni]
gi|194162787|gb|EDW77688.1| GK24627 [Drosophila willistoni]
Length = 3471
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 81/170 (47%), Gaps = 33/170 (19%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN---LDPATEHQGPIQDEGGL------- 82
++QV ATD+D+G + YR++D D S N L ++H G + G L
Sbjct: 1021 IIQVNATDRDTGNNARLTYRIVDAGVDNVSISNSHALSDISQHFGVFPNSGWLYLRSPLD 1080
Query: 83 ---------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAV 120
+ + IRV D ND +P+F+ YEF + E + G V
Sbjct: 1081 REQRDRYQLTVMATDNGTPAAQAKTRIVIRVLDANDNDPKFKRSNYEFRIEENMRRGSKV 1140
Query: 121 GRVHATDADEGQNAVVYYSV-PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G V A+D D G NA + YS+ P++ F + TG+I T + LD E+++LY
Sbjct: 1141 GIVQASDLDLGDNAAIRYSLMPQNSSFQIQPITGEITTKEPLDREQRELY 1190
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 81/175 (46%), Gaps = 24/175 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + + G +++QV A D+D G +V Y L + A +F +D T
Sbjct: 469 YHANVMEVADPGTSVLQVVAHDRDEGNNSVVTYFLAETPETHAQWFQIDSQTGLITTRSH 528
Query: 71 --------EHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
I +GG LSS+ATV + + D+ND P F Y ++ E + G
Sbjct: 529 IDCETEPVPQLTVIARDGGQPALSSSATVLVTIHDVNDNEPIFDQSFYNVTIAENEPIGR 588
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
+ +V A+D D G NA+V Y++ E F V + +G+I LDYE++ Y
Sbjct: 589 CILKVSASDPDCGVNAMVNYTLGEGFKHLTEFEVRSASGEICIAGELDYEQRSSY 643
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 75/162 (46%), Gaps = 33/162 (20%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGPI--------------QD 78
V+A+D D G + Y L+ N S F + P T + P+ +D
Sbjct: 1143 VQASDLDLGDNAAIRYSLMPQN----SSFQIQPITGEITTKEPLDREQRELYDLLVEARD 1198
Query: 79 EGGLSSTATVNIR--VTDINDKNPEFQSLPYE--FSVPEGQD-GLAVGRVHATDADEGQN 133
+G +A V +R VTD+ND PE P E SV E Q G V R+ A D D GQN
Sbjct: 1199 QGSPQRSARVPVRIHVTDVNDNAPEIAD-PQEDVVSVREEQPPGTEVVRIRAIDRDSGQN 1257
Query: 134 AVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
A + YS+ + F +D TG IRT LD+E++ +Y
Sbjct: 1258 ASITYSIVKGRDSDGHGLFSIDPQTGVIRTRTVLDHEERSIY 1299
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L TVNI + D+ND P F Y +VPE G +V +V+A+D D +N +V Y++
Sbjct: 226 LRGLMTVNITIQDVNDNQPIFNQSRYFATVPENSTVGTSVLQVYASDTDADENGLVEYAI 285
Query: 141 -----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ F +D+ TG I NK LD+E ++L+
Sbjct: 286 NRRQSDKEQMFRIDSQTGAIFINKPLDFETKELH 319
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 27/176 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y ++ +G + V A+ DS + G + Y + + D YF+++ ++
Sbjct: 795 YNYQVKEDKPMGTVVGSVMASSSDSAQRGGIRYSIYSGDPDG--YFSIESSSGNIRIAHP 852
Query: 71 -EHQGPIQDEGGLSSTAT----------VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
+H+ Q + +T++ V I V D+ND PEF++ SVPE + G
Sbjct: 853 LDHEAKAQVLLNIQATSSGDPPVYGHTQVKIEVEDVNDNAPEFETTSVRISVPENAELGT 912
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-----FVVDANTGDIRTNKALDYEKQQLY 169
+ HA D D G++ V YS+ F +D ++G + ++ LDYE Q +
Sbjct: 913 PLYAAHAKDKDSGKSGQVTYSLSSLSKKSLNLFAIDGSSGHLVLSQHLDYEVSQRH 968
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L +T ++ +RVTDIND PEF+ Y +V E D G +V +V A D DEG N+VV Y +
Sbjct: 444 LHATKSIFLRVTDINDNAPEFEHSVYHANVMEVADPGTSVLQVVAHDRDEGNNSVVTYFL 503
Query: 141 PEDIP------FVVDANTGDIRTNKALDYEKQ 166
E P F +D+ TG I T +D E +
Sbjct: 504 AE-TPETHAQWFQIDSQTGLITTRSHIDCETE 534
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 72/169 (42%), Gaps = 28/169 (16%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY--------------RLLDNNTDA 60
D FY + +G +++V A+D D G +V Y R
Sbjct: 572 DQSFYNVTIAENEPIGRCILKVSASDPDCGVNAMVNYTLGEGFKHLTEFEVRSASGEICI 631
Query: 61 ASYFNLDPATEHQGPI--QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
A + + + ++ P+ D GGLS+TA + +++TDIND P F Y S+ E Q
Sbjct: 632 AGELDYEQRSSYEFPVLATDRGGLSTTAMIKMQLTDINDNRPVFYPREYNVSLKEFQSQS 691
Query: 119 AVGR---------VHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
+ G+ V ATD D G V Y + E F ++ +TG+I
Sbjct: 692 SQGQTNSNAPIVAVVATDPDSGDFGQVSYRIVNGNEAGIFRIERSTGEI 740
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 86 ATVNIRVTDINDKNPEFQ-SLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
ATV I + D+ND PEF+ Y SVPE + + V ATD DEG NA + YS+
Sbjct: 1789 ATVVITIGDVNDHAPEFRPGSCYGLSVPENSETSVIHTVVATDLDEGVNADILYSIIGGN 1848
Query: 143 -DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
F +DA TG++ + ++LD E+ Y +V
Sbjct: 1849 LGNKFSIDARTGEL-SARSLDREQHSRYTLQV 1879
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
SS+ TV I V DIND P + P E +V E G + ATDAD G NA + Y +
Sbjct: 1429 SSSITVKIEVADINDNPPHWPQDPLELNVSEATSVGTIIYNFTATDADAGHNAELQYRLL 1488
Query: 141 ---PEDIP-------FVVDANTGDIRTNKALDYEKQQLYL 170
P P F +D+ TG + LD+E + YL
Sbjct: 1489 SYSPHHYPNESVGEIFAMDSLTGSLSLQSPLDFESIKEYL 1528
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 60/133 (45%), Gaps = 20/133 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ---------- 77
ELG L A DKDSGK G V Y L + + + F +D ++ H Q
Sbjct: 909 ELGTPLYAAHAKDKDSGKSGQVTYSLSSLSKKSLNLFAIDGSSGHLVLSQHLDYEVSQRH 968
Query: 78 -------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
D G LSS T+ + V D+ND P F+ Y ++ E + + +V+ATD
Sbjct: 969 TLIVTARDAGTPSLSSNLTILVDVQDVNDNPPLFERDEYAVNISEVRPVNTQIIQVNATD 1028
Query: 128 ADEGQNAVVYYSV 140
D G NA + Y +
Sbjct: 1029 RDTGNNARLTYRI 1041
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 28/167 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-----ASYFNLDPAT------------- 70
+G ++ + +ATD D G FG + Y L + ++A F++DP +
Sbjct: 2851 MGTSIFRAQATDLDRGPFGQLNYSLAASPSNADGDDEWRLFHIDPQSGVVTSSGVFDYEQ 2910
Query: 71 ----EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG---QDGLAVGRV 123
+ + D GG ++ + + + ++ P+F Y F +P G VG+V
Sbjct: 2911 RQRYDLELRATDMGGKTARVALRVEIESRDEFQPQFTERTYRFVLPAAVALPAGFVVGQV 2970
Query: 124 HATDADEGQNAVVYY--SVPEDIPFVVDANTGDIRTNKALDYEKQQL 168
A+D+D G + V Y S P F V+ ++G + + L E ++
Sbjct: 2971 QASDSDSGPDGRVVYQLSAPHQ-HFKVNRSSGAVLVKRKLKLEDAEV 3016
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+S A + + + D ND +P+F + +V EG G V +V A DAD G NA + Y +
Sbjct: 2273 LTSYAELIVELEDENDNSPQFSQHQFVATVWEGNSKGTYVAQVQAFDADAGANARLRYHI 2332
Query: 141 PE---DIPFVVD-ANTGDIRTNKALDYEKQQLYLERVF 174
+ D FV++ A +G ++TN LD E + +Y ++
Sbjct: 2333 VDGNHDNAFVIEPAFSGIVKTNIVLDREIRDVYQLKII 2370
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 36/170 (21%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE----------------HQ 73
G + QV+A D D+G + Y ++D N D A F ++PA +Q
Sbjct: 2309 GTYVAQVQAFDADAGANARLRYHIVDGNHDNA--FVIEPAFSGIVKTNIVLDREIRDVYQ 2366
Query: 74 GPI--QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEF-SVPEGQD-GLAVGRVHATD 127
I DEG ++ TAT+ +++ D+ND P F P SV E + G + + A D
Sbjct: 2367 LKIIATDEGVPQMTGTATIRVQIVDVNDNQPTFP--PNNLVSVSEATELGSVITSISAND 2424
Query: 128 ADEGQNAVVYYSVPEDIP--------FVVDANTGDIRTNKALDYEKQQLY 169
D + + Y + D F +D +G + + LDYE QQ Y
Sbjct: 2425 VD--THPTLTYRLGSDSSVARENQGIFALDRYSGKLVLKRRLDYESQQEY 2472
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 68/165 (41%), Gaps = 32/165 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLD------NNTDAASYFNLDPAT---EHQGPIQDE 79
+G + ATD D+G ++YRLL N F +D T Q P+ E
Sbjct: 1463 VGTIIYNFTATDADAGHNAELQYRLLSYSPHHYPNESVGEIFAMDSLTGSLSLQSPLDFE 1522
Query: 80 G-------------------GLSSTATVNIRVTDINDKNPEFQSL-PYEFSVPEGQDGLA 119
L S+ T+ +RVTD ND P+F + P + + G
Sbjct: 1523 SIKEYLLVVQALDQSSNVTERLQSSVTMRLRVTDANDNPPQFMAPGPLVYVSDAIRIGEV 1582
Query: 120 VGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKAL 161
V V A D D+G N + YS+ + F +++ TG+I K+L
Sbjct: 1583 VTHVVAMDPDKGANGQISYSILSGNGEGRFRINSETGEIELVKSL 1627
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 72/173 (41%), Gaps = 25/173 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
YG + E V + V ATD D G + Y ++ N + F++D T
Sbjct: 1811 YGLSVPENSETSV-IHTVVATDLDEGVNADILYSIIGGNL--GNKFSIDARTGELSARSL 1867
Query: 71 ---EH-----QGPIQDEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
+H Q D G L + I V D ND P F+ Y ++ E G
Sbjct: 1868 DREQHSRYTLQVQASDRGKPNSLQGQCNITILVEDQNDNAPRFELPKYIANIAEDAAIGS 1927
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
+V R+ A DAD G NA + Y++ + F +D+ +G I T LD E Q Y
Sbjct: 1928 SVVRIKANDADLGINARLVYALANETQWQFAIDSKSGLITTVGKLDRELQSSY 1980
Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 19/101 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------- 71
Y A + +G +++QV A+D D+ + GLVEY + +D F +D T
Sbjct: 251 YFATVPENSTVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDSQTGAIFINKP 310
Query: 72 --------HQGPI--QDEGG--LSSTATVNIRVTDINDKNP 100
H+ + +D G L +TA V+IRVTD+ND P
Sbjct: 311 LDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQP 351
Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 32/175 (18%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT---------EHQ 73
R++ G +++++A D+DSG+ + Y ++ ++D F++DP T +H+
Sbjct: 1235 REEQPPGTEVVRIRAIDRDSGQNASITYSIVKGRDSDGHGLFSIDPQTGVIRTRTVLDHE 1294
Query: 74 -------GPIQDEGGLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR 122
G +GG T + + V D+ND P F S F V E G VG
Sbjct: 1295 ERSIYRLGVAATDGGQPPKETLRMLRVEVLDLNDNRPTFTSSSLVFRVREDASVGHVVGS 1354
Query: 123 V------HATDADEGQNAVVYYSVP--EDI---PFVVDANTGDIRTNKALDYEKQ 166
+ ++ DA + Q V Y P +D+ F +D G++ + LD E Q
Sbjct: 1355 ISPSETSNSLDAPDDQLCVTYSLNPLTKDLIEGAFDIDRQMGNLVVARQLDREVQ 1409
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYY 138
S+ V I V D+ND P F+ PY VP Q G + +V A D DE N + Y
Sbjct: 1996 SARVPVQINVLDVNDNKPVFERYPYMAQVPSLIQPGQTLVKVQAHDLDENLNGEITY 2052
>gi|56606025|ref|NP_001008420.1| cadherin-12 precursor [Mus musculus]
gi|81910017|sp|Q5RJH3.1|CAD12_MOUSE RecName: Full=Cadherin-12; Flags: Precursor
gi|55991463|gb|AAH86655.1| Cadherin 12 [Mus musculus]
Length = 794
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + +G ++QVKATD D +G V Y +L YF++DP T
Sbjct: 165 YVASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQ----GQPYFSIDPKTGVIRT 220
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGL+ T VNI +TD+ND P F + VPE
Sbjct: 221 ALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTVVNITLTDVNDNPPRFPKSIFHLKVPE 280
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYS-VPED----IPFVVDANT--GDIRTNKALDYEK 165
G A+GR+ A D D G+NA + Y+ VP D V D +T G I+ K LD+E
Sbjct: 281 SSPVGSAIGRIRAVDPDFGKNAEIEYNIVPGDGGNLFDIVTDEDTQEGIIKLKKPLDFET 340
Query: 166 QQLYLERV 173
++ Y +V
Sbjct: 341 KKAYTFKV 348
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY SVPE G V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKVQDINDNEPKFLDGPYVASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQP 207
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F +D TG IRT +D E ++ Y
Sbjct: 208 YFSIDPKTGVIRTALPNMDREVKEQY 233
>gi|397475352|ref|XP_003809105.1| PREDICTED: cadherin-10 [Pan paniscus]
Length = 788
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 164 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 222
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F V E
Sbjct: 223 PNMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESS 282
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G A+G V ATDAD G+NA V Y + + DI D G I K LDYE ++
Sbjct: 283 PVGTAIGSVKATDADTGKNAEVEYRIIDGDGTDMFDIVTEKDTQEGIITVKKPLDYESRR 342
Query: 168 LYLERV 173
LY +V
Sbjct: 343 LYTLKV 348
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|301605224|ref|XP_002932249.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Xenopus
(Silurana) tropicalis]
Length = 2977
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 87/180 (48%), Gaps = 25/180 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGP 75
Y R+ E+G +M ++ATD D+ + YRLL + A++ F +DP + + P
Sbjct: 320 YRENIRENLEVGYEVMTIRATDGDALSNANMLYRLLGGSEGASAVFEIDPRSGIVRTRAP 379
Query: 76 I------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QD 116
+ +D G S+TATV I V D ND P+F Y VPE
Sbjct: 380 VDREAVADYQLIVEANDQGKDPGPKSATATVYIYVEDENDNYPQFTEKRYVVQVPENVSP 439
Query: 117 GLAVGRVHATDADEGQNAVVYYS-VPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ +V ATD D+G NA+VYYS V +I F + + TG+I LDYE + Y R+
Sbjct: 440 NSHILQVQATDRDKGNNAIVYYSIVSGNIKGQFYIHSFTGNIDVIHPLDYEAIREYSLRI 499
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 79/159 (49%), Gaps = 22/159 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYF-----NLD--------PATEHQGPIQDE 79
++QV+ATD+D G +V Y ++ N Y N+D E+ I+ +
Sbjct: 443 ILQVQATDRDKGNNAIVYYSIVSGNIKGQFYIHSFTGNIDVIHPLDYEAIREYSLRIKAQ 502
Query: 80 GG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
G ++T V ++V D+ND P F S P++ +V E G +V + A DAD G N
Sbjct: 503 DGGRPPLSNTTGMVTVQVVDVNDNAPIFVSTPFQATVLENVPIGYSVVHIQANDADSGDN 562
Query: 134 AVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A + Y + P + PFV++ NTG I + LD E +LY
Sbjct: 563 ARIQYRLTDTPPNFPFVINNNTGWITVSTELDRETVELY 601
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY 137
+G S T V I VTD N P FQS Y SV E + G ++ + ATD D G+NA +
Sbjct: 714 DGTRSDTVLVFINVTDANTHRPVFQSSHYTVSVSEDKPIGTSIVTISATDEDTGENARIS 773
Query: 138 YSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
Y++ ++IP F +D +TG I T LDYE Q Y
Sbjct: 774 YTMEDNIPQFRIDPDTGTITTLIELDYEDQASY 806
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 77/165 (46%), Gaps = 24/165 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPIQ- 77
L +++Q+ ATD+DSG G V Y N D F ++P + P+
Sbjct: 855 LSTSVLQISATDRDSGLNGRVTYTFQGGN-DGDGDFKIEPTSGIIRTNAKLDRENVPVYN 913
Query: 78 ------DEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
D G S + V+I VT DIND P F+S + V E G V R+ A+D
Sbjct: 914 LKVYAVDRGNPSLKSPVDILVTVLDINDNAPVFKSNELDIYVEENSPVGSVVARITASDP 973
Query: 129 DEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
DEG NA + Y + E + P F +D +GD+ LDYE + Y+
Sbjct: 974 DEGTNAQIMYQIVEGNNPEVFQLDLFSGDLTALIDLDYEVKTEYV 1018
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 80/187 (42%), Gaps = 28/187 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y + +G +++ + ATD+D+G+ + Y + DN F +DP T
Sbjct: 739 SSHYTVSVSEDKPIGTSIVTISATDEDTGENARISYTMEDN----IPQFRIDPDTGTITT 794
Query: 71 ------EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
E Q +D G S T V I + D ND P+F Y SV E
Sbjct: 795 LIELDYEDQASYTIAVTAKDNGIPQKSDTTYVEILILDANDNMPQFMRDRYVGSVFEDVP 854
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
+V ++ ATD D G N V Y+ D F ++ +G IRTN LD E +Y
Sbjct: 855 LSTSVLQISATDRDSGLNGRVTYTFQGGNDGDGDFKIEPTSGIIRTNAKLDRENVPVYNL 914
Query: 172 RVFLISK 178
+V+ + +
Sbjct: 915 KVYAVDR 921
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 27/166 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLD----------NNTDAASYFN-LDPATEH----- 72
+G +++ ++A D DSG ++YRL D NNT + LD T
Sbjct: 545 IGYSVVHIQANDADSGDNARIQYRLTDTPPNFPFVINNNTGWITVSTELDRETVELYTFG 604
Query: 73 -QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR--VHATDAD 129
+ Q E ++S+A+V I V D+ND NP F Y + E AVG + T D
Sbjct: 605 VEARDQGEPAMTSSASVTITVLDVNDNNPTFTEKAYHLRLNEDA---AVGSSVLTMTAVD 661
Query: 130 EGQNAVVYYSVPEDIP---FVVDANTGD--IRTNKALDYEKQQLYL 170
N+VV Y + F + + +G I LDY++++ Y+
Sbjct: 662 RDVNSVVTYQITSGNTRNRFAITSQSGGGLITLALPLDYKQERQYV 707
Score = 42.4 bits (98), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 71/174 (40%), Gaps = 30/174 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEY---RLLDNNTDAASYFNLDPATEHQGP 75
Y A + G + ++A D D+G+ G +EY L D+ ++ YF +D T
Sbjct: 212 YQASVPENEPAGTRVTSLRAVDPDTGEAGRLEYFMEALFDSRSN--DYFEIDSETGTVST 269
Query: 76 IQ-------DEGGLSSTAT------------VNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
Q D L TAT + + V+D ND P F+ Y ++ E +
Sbjct: 270 SQALDRETKDTHVLKVTATDFGSPRRSATTYLTVTVSDTNDHMPVFEQSEYRENIRENLE 329
Query: 117 -GLAVGRVHATDADEGQNAVVYY-----SVPEDIPFVVDANTGDIRTNKALDYE 164
G V + ATD D NA + Y S F +D +G +RT +D E
Sbjct: 330 VGYEVMTIRATDGDALSNANMLYRLLGGSEGASAVFEIDPRSGIVRTRAPVDRE 383
Score = 39.3 bits (90), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 14/107 (13%)
Query: 91 RVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY-------SVPE 142
R+ + +P+FQ Y+ SVPE + G V + A D D G+ + Y S
Sbjct: 196 RIKRSTNSSPQFQLHNYQASVPENEPAGTRVTSLRAVDPDTGEAGRLEYFMEALFDSRSN 255
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLI-----SKFATSYL 184
D F +D+ TG + T++ALD E + ++ +V + AT+YL
Sbjct: 256 DY-FEIDSETGTVSTSQALDRETKDTHVLKVTATDFGSPRRSATTYL 301
Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 32/171 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLD--PATEHQGP 75
+G + ++ A+D D G + Y++++ N D + +LD TE+
Sbjct: 961 VGSVVARITASDPDEGTNAQIMYQIVEGNNPEVFQLDLFSGDLTALIDLDYEVKTEYVIV 1020
Query: 76 IQDEGG-LSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRVHA 125
+Q L S ATV++++ D ND +P Q F S P G +G++ A
Sbjct: 1021 VQATSAPLVSRATVHVKLLDKNDNDPVLQDFEIIFNNYVTNKSNSFPTG----VIGKIPA 1076
Query: 126 TDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
D D ++YS + ++D +TG+++ ++ LD + L RV
Sbjct: 1077 YDPDVSD--TLHYSFIQGNELNLLILDPSTGELKLSRDLDNNRPLEALMRV 1125
>gi|334350360|ref|XP_001374577.2| PREDICTED: protocadherin-11 X-linked [Monodelphis domestica]
Length = 1256
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYF-NLDP 68
+G + + LG L ++ ATDKDSGK G + Y + LDN T S LD
Sbjct: 458 FGISVPENNALGAQLTKISATDKDSGKNGEITYLIANEGPYPFSLDNRTGVLSAVEQLDR 517
Query: 69 ATEHQGPI----QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--QDGLAV 120
T+ + +D G L S ATV + V D ND +P F Y F VPE + G V
Sbjct: 518 ETKDKYTFTVTARDNGEPHLQSNATVTVTVLDQNDNSPTFTHSEYNFYVPENLPKHG-TV 576
Query: 121 GRVHATDADEGQNAVVYYSV-PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + TD D G N V+ ++ + F++DA G IR N + D EKQ+ Y
Sbjct: 577 GLITITDPDTGDNGVITLTILNNNGSFIIDAVNGVIRPNISFDREKQESY 626
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY--- 138
SSTA + + V D+ND P F+ E ++PE G +V ++HATDAD G NA + Y
Sbjct: 217 SSTAILQVSVIDMNDNRPIFKETEIEVTIPENAPVGSSVYQLHATDADVGANARIQYFFS 276
Query: 139 SVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
S+ ++ F ++ TG I + LD E+ L+
Sbjct: 277 SLMSNVAKKLFSLNNTTGLITIKEPLDREQAPLH 310
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVE--------YRL---LDNN--TDAASYFNLDPATEHQGP 75
L + V DKD+ + G V +RL DN + +S+ + + E++
Sbjct: 363 LNTKIALVTLIDKDADRNGRVTCFTTNEVPFRLRPVFDNQFLMETSSFLDYETVKEYEVQ 422
Query: 76 I--QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
+ D G L+ T +V I++ D ND P F + SVPE G + ++ ATD D
Sbjct: 423 LLASDAGKPPLNYTTSVVIKIKDENDNAPVFTQPTFGISVPENNALGAQLTKISATDKDS 482
Query: 131 GQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLY 169
G+N + Y + + PF +D TG + + LD E + Y
Sbjct: 483 GKNGEITYLIANEGPYPFSLDNRTGVLSAVEQLDRETKDKY 523
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 19/128 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNN----TDAASYF---NLDPATEHQGP-----IQDE 79
T+ + TD D+G G++ +L+NN DA + N+ E Q + +
Sbjct: 575 TVGLITITDPDTGDNGVITLTILNNNGSFIIDAVNGVIRPNISFDREKQESYTFVVVATD 634
Query: 80 GGL---SSTATVNIRVTDINDKNPEFQSLP----YEFSVPEGQDGLAVGRVHATDADEGQ 132
GG SSTA V I V DIND P F P +EF + G + V A D D G
Sbjct: 635 GGRVPRSSTARVTINVVDINDNKPVFVVPPSNYTFEFIPLATEIGTLLYVVMAVDEDTGM 694
Query: 133 NAVVYYSV 140
N+ + Y +
Sbjct: 695 NSEIRYQI 702
>gi|47225791|emb|CAF98271.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1382
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 83/185 (44%), Gaps = 31/185 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------- 68
S Y A + ++G +++QV A DKD G G + Y LL +++ S F +DP
Sbjct: 11 SSIYEASVTEGAQIGTSVLQVSAHDKDLGLNGQITYTLLSDSSGDHSLFRIDPELGIIYT 70
Query: 69 --------------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYE 108
E P +++ S TA V + ++D+ND P F YE
Sbjct: 71 EAVFDREARSSYLLEVQSEDGQESARPGKNKQPNSDTAYVRVFISDVNDNKPVFAQRLYE 130
Query: 109 FSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
V E D GLAV V ATD DEG NA + Y + F ++ G I + LDYE
Sbjct: 131 VGVDEDADVGLAVVTVSATDEDEGANAKLRYQITSGNKGGVFDIEPEVGTIFVAQPLDYE 190
Query: 165 KQQLY 169
+Q+ Y
Sbjct: 191 QQKRY 195
Score = 36.6 bits (83), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 15/78 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEG--GLSSTA 86
+G +++QV ATD DSG G + Y +L P ++ G G L+++
Sbjct: 275 VGTSIIQVVATDTDSGLNGEILYSIL-------------PQSDPHGHFATAGTPALTASV 321
Query: 87 TVNIRVTDINDKNPEFQS 104
TV++ + D ND PE ++
Sbjct: 322 TVHLLLLDTNDNGPELET 339
>gi|16306530|ref|NP_006718.2| cadherin-10 preproprotein [Homo sapiens]
gi|114600883|ref|XP_001136070.1| PREDICTED: cadherin-10 isoform 2 [Pan troglodytes]
gi|426385060|ref|XP_004059054.1| PREDICTED: cadherin-10 [Gorilla gorilla gorilla]
gi|116241276|sp|Q9Y6N8.2|CAD10_HUMAN RecName: Full=Cadherin-10; AltName: Full=T2-cadherin; Flags:
Precursor
gi|6483303|dbj|BAA87417.1| cadherin-10 [Homo sapiens]
gi|119631147|gb|EAX10742.1| cadherin 10, type 2 (T2-cadherin) [Homo sapiens]
gi|157169618|gb|AAI52829.1| Cadherin 10, type 2 (T2-cadherin) [synthetic construct]
gi|162319316|gb|AAI56819.1| Cadherin 10, type 2 (T2-cadherin) [synthetic construct]
Length = 788
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 164 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 222
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F V E
Sbjct: 223 PNMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESS 282
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G A+G V ATDAD G+NA V Y + + DI D G I K LDYE ++
Sbjct: 283 PVGTAIGSVKATDADTGKNAEVEYRIIDGDGTDMFDIVTEKDTQEGIITVKKPLDYESRR 342
Query: 168 LYLERV 173
LY +V
Sbjct: 343 LYTLKV 348
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|5514625|gb|AAD44017.1|AF039747_1 cadherin-10 [Homo sapiens]
Length = 788
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 164 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 222
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F V E
Sbjct: 223 PNMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESS 282
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G A+G V ATDAD G+NA V Y + + DI D G I K LDYE ++
Sbjct: 283 PVGTAIGSVKATDADTGKNAEVEYRIIDGDGTDMFDIVTEKDTQEGIITVKKPLDYESRR 342
Query: 168 LYLERV 173
LY +V
Sbjct: 343 LYTLKV 348
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|332228105|ref|XP_003263231.1| PREDICTED: cadherin-10 [Nomascus leucogenys]
Length = 788
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 164 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 222
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F V E
Sbjct: 223 PNMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESS 282
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G A+G V ATDAD G+NA V Y + + DI D G I K LDYE ++
Sbjct: 283 PVGTAIGSVKATDADTGKNAEVEYRIIDGDGTDMFDIVTEKDTQEGIITVKKPLDYESRR 342
Query: 168 LYLERV 173
LY +V
Sbjct: 343 LYTLKV 348
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|444705996|gb|ELW47369.1| Cadherin-9 [Tupaia chinensis]
Length = 789
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 88/189 (46%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + +G +++QV ATD D +G V Y +L YF++DP +
Sbjct: 163 LYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGIIK 218
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
++Q IQ + GGLS T TVNI +TD+N+ P F Y+F+ P
Sbjct: 219 TALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQFNSP 278
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYE 164
E G +GR+ A D D G+NA + YSV E D+ D G I + LD+E
Sbjct: 279 ESVPLGTHLGRIKAYDPDVGENAEMEYSVAEGDGADMFDVITDKDTQEGIITVKQNLDFE 338
Query: 165 KQQLYLERV 173
+ LY +V
Sbjct: 339 NKMLYTIKV 347
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPKFTKDLYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRT 157
F VD +G I+T
Sbjct: 207 YFSVDPESGIIKT 219
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G + Y + FV+D NTGDI K LD E++ LY+
Sbjct: 68 GTDTQYVGKLH-TDQDKGDGNLKYILTGDGAGSIFVIDENTGDIHAAKKLDREEKSLYVL 126
Query: 172 RVFLISK 178
R I +
Sbjct: 127 RAKAIDR 133
>gi|410914515|ref|XP_003970733.1| PREDICTED: protocadherin Fat 4-like [Takifugu rubripes]
Length = 5463
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 77/161 (47%), Gaps = 23/161 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ ATD D G LV Y ++ D+ F +DP + E +
Sbjct: 2224 GFKIMQLTATDADEGPNALVTYTIISGADDS---FRIDPESGDLIATKKLDRERRSKYSL 2280
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQ 132
D+G SS +NI V D+ND +P+F Y F +PE G V + A+D+D G
Sbjct: 2281 LVRADDGKQSSDMRLNITVKDVNDHSPKFSRATYSFDIPEDMAAGSIVAAILASDSDSGI 2340
Query: 133 NAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
N V YS+ ED F+++ TG + LDYE QQ Y+
Sbjct: 2341 NGEVTYSLEEDDEDETFLLNPVTGVFNVTRPLDYEVQQFYI 2381
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQDEG----GLSST 85
++ V A D DSG G +EY ++D N D + F+++ AT P+ E GL
Sbjct: 3155 VLIVSALDLDSGPNGQLEYAIVDGNKDNS--FSINRATGEIRTTRPLDREKVAQYGLKVK 3212
Query: 86 AT------------VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQN 133
AT V I V D+ND P F + G V RV TD D G N
Sbjct: 3213 ATDRGLPQKNMAVRVLINVLDVNDNAPRFSKIFSATVAENAPAGYTVTRVTTTDEDAGSN 3272
Query: 134 AVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
AV YS+ + +PF ++ +TGDI ++ L+ E Y+ +V
Sbjct: 3273 AVSRYSIADTGLPFNINPSTGDITVSRPLNREDTDHYIVKV 3313
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 76/162 (46%), Gaps = 22/162 (13%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LDPATEHQGPIQ 77
+G + + A DKD G++ Y + N N LD + Q ++
Sbjct: 3572 VGTAIRTLSARDKDREMNGVITYNITSGNDRGLFSINSRSGVLALAQPLDFEEKQQHNLR 3631
Query: 78 ----DEGGLSSTA--TVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADE 130
D G +S T+ +V + VTD+ND P F+ Y V E G V ++ ATD D
Sbjct: 3632 VSATDGGWISKTSYVSVTVHVTDVNDNPPVFEPDEYFPVVQENVPSGTTVVKMTATDGDS 3691
Query: 131 GQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G NAV+ Y S D+ FV+D NTG I T LDYE +Q+Y
Sbjct: 3692 GANAVMAYVIQSSDSDL-FVIDPNTGTITTQGFLDYEAKQVY 3732
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 24/161 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQ----- 73
G + + A+D DSG G V Y L +++ D F L+P T E Q
Sbjct: 2325 GSIVAAILASDSDSGINGEVTYSLEEDDEDET--FLLNPVTGVFNVTRPLDYEVQQFYIL 2382
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEG 131
+D GG +ST V V D+ND P F + Y SV E G ++ V A+DAD+G
Sbjct: 2383 TAKARDGGGQASTVRVYFNVLDVNDNPPAFNTSVYSTSVSESLPAGSSIVTVGASDADDG 2442
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
NA + Y + P F++ + G ++T KALD E Q Y
Sbjct: 2443 PNAQLLYRIASGDPQSHFIITKD-GVLKTQKALDRESQSFY 2482
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDIPF 146
VN+ + DIND P F+ Y+ SV E G +V +V A+D DEG NA + Y + E PF
Sbjct: 713 VNVTIQDINDNPPSFEQDQYQTSVFEDAAVGSSVLQVAASDGDEGANAEIRYFLDEGTPF 772
Query: 147 VVDANTGDIRTNKALDYEKQQLY 169
+D TG + + LDYE ++ Y
Sbjct: 773 QIDPKTGTVVIKEGLDYESKREY 795
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 72/158 (45%), Gaps = 21/158 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LDPATEHQGPIQ---- 77
L++V A+D D + GLV YR+ + N + + LD T ++
Sbjct: 1697 LLRVSASDVDENRNGLVHYRVAEGNEEGQFMIDGSSGQVTLVGKLDYETTSSYSLKIIAV 1756
Query: 78 DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNA 134
D G LSS+ ++I + D ND P F V E + G V V ATDAD GQNA
Sbjct: 1757 DAGAEPLSSSCMLSISILDENDNAPSFPKPSVSVDVLENMRIGELVASVTATDADSGQNA 1816
Query: 135 VVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ YS+ F + +TG I K LDYE Q +Y
Sbjct: 1817 DITYSITATNNHGTFSISPSTGSIFLVKKLDYETQSVY 1854
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 74/164 (45%), Gaps = 32/164 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++++ ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3678 GTTVVKMTATDGDSGANAVMAYVIQSSDSD---LFVIDPNT---GTITTQGFLDYEAKQV 3731
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S A VNI++ N+ P F S Y F + E G VG V A+
Sbjct: 3732 YHLTVKAFNVPDEERCSFANVNIQLKGANEYVPRFVSKQYYFEISEAAPKGTVVGEVFAS 3791
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQ 167
D D+G + VVYY + F ++ TG I LD EK++
Sbjct: 3792 DRDQGDDGVVYYLIFGKSRKKGFGINRTTGQIYVTGTLDREKEE 3835
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI---------------- 76
+ V A+D DSG VEY L ++ S +D G +
Sbjct: 2537 VFAVHASDSDSGPNSYVEYSLRGPFSNKFSIGTIDGDVRLVGELDREELSNYTLTVVATD 2596
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+ E LSST V + V D+ND P F Y+ + E G V +V ATDADEG N
Sbjct: 2597 KGEPPLSSTMDVTMVVLDVNDNTPSFSQNIYDIEIEENTLTGTDVIQVFATDADEGTNGQ 2656
Query: 136 VYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ +S+P + F +D+ TG I K LD E + Y
Sbjct: 2657 IRFSIPGGNTNSDFRIDSVTGVISVAKQLDREARSSY 2693
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 22/167 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + G T+ +V TD+D+G + Y + D FN++P+T
Sbjct: 3242 SKIFSATVAENAPAGYTVTRVTTTDEDAGSNAVSRYSIADTGLP----FNINPSTGDITV 3297
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
P+ E G + + V I +TDIND P F Y PE + G
Sbjct: 3298 SRPLNREDTDHYIVKVSAHDSGWTVSTDVTIFITDINDNAPRFSRPSYYLDYPELTEVGS 3357
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
V +V ATD D+G N ++Y + F ++A+TG I + L Y+
Sbjct: 3358 LVTQVTATDPDKGVNGKIFYFIRSQSEYFRMNASTGQIFVKQPLKYQ 3404
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 75/171 (43%), Gaps = 24/171 (14%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------ 68
D L Y + + +V+ATDKDSG G + Y + NT A F + P
Sbjct: 1465 DQLSYEVTILESEPVNSRFFKVEATDKDSGFNGEIMYDITGGNT--ADVFGIFPDGQLYI 1522
Query: 69 ATEHQGPIQDEGG------------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
E IQD LS++ V++ + D+ND P F S Y F E Q
Sbjct: 1523 KAELDREIQDRYNLVLVAKDRAVEPLSASVNVSVLLDDVNDNRPLFNSTNYVFHFAEEQK 1582
Query: 117 -GLAVGRVHATDADEGQNAVVYYS--VPEDIPFVVDANTGDIRTNKALDYE 164
G VGRV A D D G N+ + Y+ P+ F ++A TG++ + D E
Sbjct: 1583 RGSLVGRVFAEDKDFGPNSEIRYAFETPQ-ANFELNAITGELTSTAQFDRE 1632
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 13/124 (10%)
Query: 60 AASYFNLDPATEHQG---PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
A+ F+ + QG P++D+ A V + + DIND P+F Y+ SV E
Sbjct: 1639 GAAVFSFVVLSSDQGLPRPLRDQ------AKVQVYIQDINDNQPKFTKDIYQASVSESAP 1692
Query: 117 GLA-VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYLER 172
+ + RV A+D DE +N +V+Y V E+ F++D ++G + LDYE Y +
Sbjct: 1693 NVTQLLRVSASDVDENRNGLVHYRVAEGNEEGQFMIDGSSGQVTLVGKLDYETTSSYSLK 1752
Query: 173 VFLI 176
+ +
Sbjct: 1753 IIAV 1756
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 71/167 (42%), Gaps = 23/167 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLDPATEHQGPIQD---------- 78
G L+ + ATD D G G V + + A F LD + +
Sbjct: 1066 GTELLVLSATDDDLGSNGTVHFSFDAETPASAQELFRLDALSGRLSTAAELDREERASYL 1125
Query: 79 ------EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDA 128
+GG L S VN+ + D+ND P F + Y +V E + G V V ATD
Sbjct: 1126 LHVQAADGGSPPLRSAGRVNVTLRDVNDNRPVFYPVQYFANVKENEPSGSYVTTVSATDP 1185
Query: 129 DEGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
D G+N V Y + + + F ++ NTG I T LD E++ Y +V
Sbjct: 1186 DLGRNGTVKYMITAGDTVKFHINGNTGKIGTLVPLDREEKTTYQLQV 1232
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + D+ND P F + + ++ E DG + ++ ATDADEG NA+V Y++
Sbjct: 2192 AEVEITLQDVNDNPPVFPNDILDVTIEENVGDGFKIMQLTATDADEGPNALVTYTIISGA 2251
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ K LD E++ Y
Sbjct: 2252 DDSFRIDPESGDLIATKKLDRERRSKY 2278
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 68/155 (43%), Gaps = 29/155 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G ++ V ++D D G G++ + F+++PAT E + Q
Sbjct: 2848 GTDVLLVNSSDADVGNNGVISL------SGGHGQFSINPATGQIITSSLLDREERANYQL 2901
Query: 78 -----DEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDA 128
D G GLSS+ATV++ V DIND P F PY +P G V V TD
Sbjct: 2902 LVVATDGGQPQGLSSSATVSVTVADINDNPPRFHHHPYVTHIPASTAAGSLVFAVTVTDE 2961
Query: 129 DEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKAL 161
D G NA ++YS+ F +D G I N+ L
Sbjct: 2962 DAGANAQLHYSLVGRSSEKFKIDPVRGAITANEKL 2996
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 69/163 (42%), Gaps = 28/163 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA---------------------SYFNLD 67
L ++QV A D D G G + Y L N + A Y L
Sbjct: 2743 LPTNILQVVARDDDQGANGQLSYMLSGGNDEGAFSLSSSGQLSLTQTVDREARSRYVLLI 2802
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHAT 126
AT+ P LS T TV + V+D+ND P F + + ++ E G V V+++
Sbjct: 2803 TATDSGVP-----PLSGTCTVTVSVSDVNDNAPVFTASSFHTTITEDAPTGTDVLLVNSS 2857
Query: 127 DADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
DAD G N V+ S F ++ TG I T+ LD E++ Y
Sbjct: 2858 DADVGNNGVISLSGGHG-QFSINPATGQIITSSLLDREERANY 2899
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 74/173 (42%), Gaps = 34/173 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTAT-- 87
G + V ATD DSG+ + Y L+ N A +F++ +E+ G + G L T
Sbjct: 961 GSYIKGVSATDGDSGQNANLRYSLVSGN--ALGWFSI---SENSGLVTSAGLLDRETTSE 1015
Query: 88 --------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHAT 126
+ I +TD+ND+ P F + S+ E G + + AT
Sbjct: 1016 IVLNISAKDQGLQPRVSYTKLVINITDVNDQVPTFTQSTFHVSLVEHAPAGTELLVLSAT 1075
Query: 127 DADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLERV 173
D D G N V++S + P F +DA +G + T LD E++ YL V
Sbjct: 1076 DDDLGSNGTVHFSFDAETPASAQELFRLDALSGRLSTAAELDREERASYLLHV 1128
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV-- 140
SS V I + D+ND +P F P++ + E V V A D D G N + Y++
Sbjct: 3118 SSYGKVEITIQDVNDNHPVFDKDPFQADILENLSPQRVLIVSALDLDSGPNGQLEYAIVD 3177
Query: 141 -PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
+D F ++ TG+IRT + LD EK Y +V
Sbjct: 3178 GNKDNSFSINRATGEIRTTRPLDREKVAQYGLKV 3211
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 72/166 (43%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG+ + Y + N F++ P+T E Q
Sbjct: 1797 RIGELVASVTATDADSGQNADITYSITATNNHGT--FSISPSTGSIFLVKKLDYETQSVY 1854
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG-LAVGRVHATD 127
+D G SS+ V I+V D ND P F S+PE +V + A D
Sbjct: 1855 RLNVSAKDNGRPPRSSSIPVIIQVRDFNDNPPIFTPGDIFKSIPENLPASTSVMMITAHD 1914
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + YS+ + +P F +DA+TG I TN+ +D E L+
Sbjct: 1915 TDADINGQLEYSIVQQVPRGNHFSIDASTGVIYTNQEVDREFSNLF 1960
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 77/175 (44%), Gaps = 36/175 (20%)
Query: 28 ELGVTLMQVKATDKDSGKFGL---VEYRLLDNNTDAASYFNLDPATEHQGPIQ------- 77
++G L+QV A DK FGL VEY + N +++ F LD + G I
Sbjct: 3465 KVGTRLIQVVANDKK--DFGLNSEVEYLITGGN--SSTKFKLDKTS---GWITVASSLVS 3517
Query: 78 -------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVG 121
D G LS+ +V I VT+ N PEF +VPE G A+
Sbjct: 3518 DVNKIFLADVTATDRGNPPLSARTSVRIAVTEENHHTPEFSQSQVSATVPESIAVGTAIR 3577
Query: 122 RVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ A D D N V+ Y++ F +++ +G + + LD+E++Q + RV
Sbjct: 3578 TLSARDKDREMNGVITYNITSGNDRGLFSINSRSGVLALAQPLDFEEKQQHNLRV 3632
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 19/128 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLDPATEHQGPI 76
G ++QV ATD D G G + + + NT++ A + + + + +
Sbjct: 2638 GTDVIQVFATDADEGTNGQIRFSIPGGNTNSDFRIDSVTGVISVAKQLDREARSSYSLVV 2697
Query: 77 Q--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVG--RVHATDADE 130
Q D G T ATVNI + D+ND +P F+ PY V E + L +V A D D+
Sbjct: 2698 QAADRGSSPRTDQATVNIVLLDVNDCSPVFELSPYTIGVQENLENLPTNILQVVARDDDQ 2757
Query: 131 GQNAVVYY 138
G N + Y
Sbjct: 2758 GANGQLSY 2765
Score = 42.7 bits (99), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVP 141
SS A++ I V DIND P FQ Y V E G + V ATD D GQNA + YS+
Sbjct: 926 SSFASLVIFVNDINDHPPIFQETEYRVDVSEDIPKGSYIKGVSATDGDSGQNANLRYSLV 985
Query: 142 EDIP---FVVDANTGDIRTNKALDYE 164
F + N+G + + LD E
Sbjct: 986 SGNALGWFSISENSGLVTSAGLLDRE 1011
Score = 42.7 bits (99), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 66/170 (38%), Gaps = 21/170 (12%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGG-------- 81
G +++ V A+D D G + YR+ + + D + Q + E
Sbjct: 2428 GSSIVTVGASDADDGPNAQLLYRIASGDPQSHFIITKDGVLKTQKALDRESQSFYNLVIT 2487
Query: 82 -----------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADE 130
+STA V++ + D+ND P F S + V VHA+D+D
Sbjct: 2488 VNDLAPPPMTRFTSTAQVSVILLDVNDCPPTFTSQKMTYIQENTPVDTVVFAVHASDSDS 2547
Query: 131 GQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N+ V YS+ P F + GD+R LD E+ Y V K
Sbjct: 2548 GPNSYVEYSLRGPFSNKFSIGTIDGDVRLVGELDREELSNYTLTVVATDK 2597
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 16/127 (12%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------------ 77
G + Q KA+D D G G+V Y L N GP++
Sbjct: 1377 GHVIFQAKASDPDEGTNGVVVYSLKQNPRGLFHIHEKHGLITLTGPLEVTTSSYEVEVLA 1436
Query: 78 DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
++ G+ +S+ + I V D+ND +P F L YE ++ E + +V ATD D G N
Sbjct: 1437 EDLGVPKHTSSLVLIISVYDVNDNSPVFDQLSYEVTILESEPVNSRFFKVEATDKDSGFN 1496
Query: 134 AVVYYSV 140
+ Y +
Sbjct: 1497 GEIMYDI 1503
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 60 AASYFNLDPATEHQGPIQDEGG-LSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDG 117
A+S + + + HQ + G ++ A VN+ V D+ND P F ++ + +V G
Sbjct: 1318 ASSQVDREEQSFHQLKVVARAGEITGEAFVNVTVKDLNDNAPHFIHAVEHVSAVENWGTG 1377
Query: 118 LAVGRVHATDADEGQNAVVYYSVPED 143
+ + A+D DEG N VV YS+ ++
Sbjct: 1378 HVIFQAKASDPDEGTNGVVVYSLKQN 1403
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 68/176 (38%), Gaps = 25/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-- 76
Y A ++ G + V ATD D G+ G V+Y + +T F+++ T G +
Sbjct: 1163 YFANVKENEPSGSYVTTVSATDPDLGRNGTVKYMITAGDT---VKFHINGNTGKIGTLVP 1219
Query: 77 ---------------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
D GGL S A V + V D D P F Y F + E G
Sbjct: 1220 LDREEKTTYQLQVAAADGGGLRSHTQAIVTVTVIDTQDNPPVFSQKVYSFVMFENVGVGT 1279
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIPFVVDAN-TGDIRTNKALDYEKQQLYLERV 173
+G V AT D N + Y D + N G I + +D E+Q + +V
Sbjct: 1280 VIGTVSATTVDLNTN-ISYLITSGDQRGLFGVNGAGQITASSQVDREEQSFHQLKV 1334
Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE--DIP 145
V I VTD ND P F S + P G + V A D DEG N V Y + E
Sbjct: 1983 VTIWVTDQNDNIPTFMSQNALVAEPNIVIGSILTTVVAYDPDEGANGEVEYELVEGDSGT 2042
Query: 146 FVVDANTGDIR 156
F++D +GDIR
Sbjct: 2043 FIMDRYSGDIR 2053
>gi|395833100|ref|XP_003789583.1| PREDICTED: cadherin-10 [Otolemur garnettii]
Length = 788
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 164 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 222
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F V E
Sbjct: 223 PNMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESS 282
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G A+G V ATDAD G+NA V Y + + DI D G I K LDYE ++
Sbjct: 283 PVGTAIGSVKATDADTGKNAEVEYRIIDGDGTDMFDIITEKDTQEGIITVKKPLDYESRR 342
Query: 168 LYLERV 173
LY +V
Sbjct: 343 LYTLKV 348
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|354491659|ref|XP_003507972.1| PREDICTED: cadherin-12 [Cricetulus griseus]
Length = 796
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + +G ++QVKATD D +G V Y +L YF++DP T
Sbjct: 167 YVASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQ----GQPYFSIDPKTGVIRT 222
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGL+ T VNI +TD+ND P F + VPE
Sbjct: 223 ALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPE 282
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYS-VPED----IPFVVDANT--GDIRTNKALDYEK 165
G A+GR+ A D D G+NA + Y+ VP D V D +T G I+ K LD+E
Sbjct: 283 SSPIGSAIGRIRAVDPDFGKNAEIEYNIVPGDGGNLFDIVTDEDTQEGIIKLKKPLDFET 342
Query: 166 QQLYLERV 173
++ Y +V
Sbjct: 343 KKAYTFKV 350
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY SVPE G V +V ATDAD+ G +A V YS+ + P
Sbjct: 150 IKVQDINDNEPKFLDGPYVASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQP 209
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F +D TG IRT +D E ++ Y
Sbjct: 210 YFSIDPKTGVIRTALPNMDREVKEQY 235
>gi|301770177|ref|XP_002920504.1| PREDICTED: cadherin-10-like [Ailuropoda melanoleuca]
gi|281338529|gb|EFB14113.1| hypothetical protein PANDA_009239 [Ailuropoda melanoleuca]
Length = 788
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 164 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 222
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F V E
Sbjct: 223 PNMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESS 282
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G A+G V ATDAD G+NA V Y + + DI D G I K LDYE ++
Sbjct: 283 PVGTAIGSVKATDADTGKNAEVEYRIIDGDGTDMFDIITEKDTQEGIITVKKPLDYESRR 342
Query: 168 LYLERV 173
LY +V
Sbjct: 343 LYTLKV 348
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|156398552|ref|XP_001638252.1| predicted protein [Nematostella vectensis]
gi|156225371|gb|EDO46189.1| predicted protein [Nematostella vectensis]
Length = 1852
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 81/169 (47%), Gaps = 30/169 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTAT- 87
+G T++ V ATD DSG G +EYRL+ N A FN+D + G I+ L T
Sbjct: 493 IGSTVVTVTATDLDSGPRGRLEYRLISGNVKGA--FNIDA---NSGSIRVSSELDRETTP 547
Query: 88 ---------------------VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHA 125
V I + DIND +P FQ PY F V E G +G+V A
Sbjct: 548 SYSLQVEARDGGSTSRSSSTRVTIALQDINDNSPIFQG-PYVFRVSESSSPGHQIGQVAA 606
Query: 126 TDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLERV 173
TDAD+ N V Y++ ++ F ++ +TG I LDYEK+ Y+ V
Sbjct: 607 TDADDSSNGDVRYALSDNTDVFSINTSTGLITLKTQLDYEKKTQYMVTV 655
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 79/181 (43%), Gaps = 39/181 (21%)
Query: 20 GAMARDKHE---LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------ 70
G+ A+ HE +G T+ +V ATD+D G+ V Y L +T S F ++PAT
Sbjct: 1102 GSYAKSLHENLPIGQTVAKVTATDRDEGENAKVTYELSVGDT---SKFEVNPATGLVTTK 1158
Query: 71 ------------------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
+H P Q S+ A + + + D+ND +P+F Y +V
Sbjct: 1159 RPLDREDQASYSLRVTAMDHGKPSQ-----SAVAAITLTINDLNDNSPQFSQSKYTLTVT 1213
Query: 113 EGQ-DGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQL 168
E +G + RV A+D D G N V YS+ F +D+ TG I +D E
Sbjct: 1214 ENTANGSNILRVLASDPDAGANGRVTYSIISGNHGNAFRIDSTTGRITVVGVVDREALAS 1273
Query: 169 Y 169
Y
Sbjct: 1274 Y 1274
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 75/167 (44%), Gaps = 33/167 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------ 82
+G + Q+ A D D G + Y L+ +T SYF +D QG I+ +G
Sbjct: 183 VGSIVRQLTAVDLDVGINARLSYSLVSGDT---SYFTVD----SQGVIRTKGAFDRETKA 235
Query: 83 ----------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHA 125
S ATV I + D+ND P F S Y SV E G A+ V A
Sbjct: 236 SYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQYTASVDEDVAIGAAMVTVTA 295
Query: 126 TDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
+D D G NA + YS + F +DA TG + +++LD+E++ Y
Sbjct: 296 SDKDNGNNADLRYSFTSGNTNHAFTLDAVTGVVTVSRSLDFEQRSSY 342
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 74/163 (45%), Gaps = 25/163 (15%)
Query: 27 HELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS------YFNLDPATEHQGPIQ--- 77
H++G QV ATD D G V Y L DN TD S L +++ Q
Sbjct: 599 HQIG----QVAATDADDSSNGDVRYALSDN-TDVFSINTSTGLITLKTQLDYEKKTQYMV 653
Query: 78 ----DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+GG SS V + V D+ND P+F Y +V E G+AV V ATDAD
Sbjct: 654 TVTAKDGGTPSRSSLTVVKVMVDDVNDNPPQFAKSLYTCTVGENLAAGVAVCYVTATDAD 713
Query: 130 EGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G N + YS+ E++ F +D TG+I T LD E Y
Sbjct: 714 SGANGKISYSILSGNENMAFAMDRFTGEITTRVPLDRETIASY 756
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV-PEDIPF 146
V I V D ND PEF Y F++ E V V ATD D G NA + YS+ + F
Sbjct: 56 VVIDVKDENDNAPEFPLNSYVFNIRENTPAAQVAIVTATDRDSGTNAAITYSLFSGENKF 115
Query: 147 VVDANTGDIRTNKALDYEKQQLYLERV 173
++++ TG+IRT LD+E + Y R+
Sbjct: 116 MMNSKTGEIRTVTPLDHETKDSYTMRI 142
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 74/173 (42%), Gaps = 26/173 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G ++ V A+DKD+G + Y NT+ A F LD T
Sbjct: 276 YTASVDEDVAIGAAMVTVTASDKDNGNNADLRYSFTSGNTNHA--FTLDAVTGVVTVSRS 333
Query: 71 ---EHQG------PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
E + + D G L+ T+ + I V DIND P F Y+ V E A
Sbjct: 334 LDFEQRSSYALGLSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPSAYQSRVKENTP--A 391
Query: 120 VGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ATD D N + + + +D F +D +TG I K+ DYE + Y
Sbjct: 392 GTQVSATDRDSSTNGALVFGIIKGNDDGVFTIDGSTGIISIAKSPDYENKTRY 444
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 73/168 (43%), Gaps = 28/168 (16%)
Query: 34 MQVKATDKDSGKFGLVEYRLLDNNT-------------------DAASYFNLDPATEHQG 74
++ ATD D G + Y L N+ + ++Y A +H
Sbjct: 1637 FKLAATDADEGTNARITYNLSRNDAFMIGASSGVITLAQPLDRENKSTYDLAIQARDHGT 1696
Query: 75 PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQN 133
P Q +S+ T+ + V DIND P S SV E Q V R+ A+DAD G N
Sbjct: 1697 PPQ-----ASSITIRVTVIDINDHRPLINSSSLRGSVRENQPKETHVMRILASDADTGLN 1751
Query: 134 AVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
A + +S+ + F +D TGDI T LD E+Q +Y R+ + K
Sbjct: 1752 AELTFSLLSNEHKSVFTLDNTTGDISTKVPLDREQQAVYTLRIGVADK 1799
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 71/162 (43%), Gaps = 24/162 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGPIQDEGGLS--- 83
G +++V A+D D+G G V Y ++ N A F +D T G + E S
Sbjct: 1219 GSNILRVLASDPDAGANGRVTYSIISGNHGNA--FRIDSTTGRITVVGVVDREALASYNL 1276
Query: 84 -------------STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
STA V I V D ND +P F S + + EG G V V ATD D
Sbjct: 1277 TISAKDSGVPPWVSTAFVAITVADENDNSPIFASNETSYGIDEGVSIGSRVAVVTATDRD 1336
Query: 130 EGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
EG NA V+YS+ + F ++A G + K ++ E Y
Sbjct: 1337 EGSNAQVFYSIVRGDTSAFAINAMNGVLTVKKEINRETVPTY 1378
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY--SVPEDIPF 146
IRV D+ND P F Y S+ E G V +V ATD DEG+NA V Y SV + F
Sbjct: 1087 IRVLDVNDNAPVFNPGSYAKSLHENLPIGQTVAKVTATDRDEGENAKVTYELSVGDTSKF 1146
Query: 147 VVDANTGDIRTNKALDYEKQQLYLERV 173
V+ TG + T + LD E Q Y RV
Sbjct: 1147 EVNPATGLVTTKRPLDREDQASYSLRV 1173
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 72/170 (42%), Gaps = 26/170 (15%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QG 74
Y + GV + V ATD DSG G + Y +L N + A F +D T +
Sbjct: 689 LYTCTVGENLAAGVAVCYVTATDADSGANGKISYSILSGNENMA--FAMDRFTGEITTRV 746
Query: 75 PIQ-------------DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DG 117
P+ D+G L + TVNI + D ND P F P F++ E G
Sbjct: 747 PLDRETIASYSLTINADDGSLVRFMAATTVNISIADENDNQPTFTG-PSRFNISEDSPTG 805
Query: 118 LAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
VG++ ATD D G N V Y++ + F +D +G + LD E
Sbjct: 806 TRVGQLTATDRDIGPNGAVTYAIISGNQGNSFQLDPRSGILSVRSTLDRE 855
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 24/171 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A R+ ++++V A+D+DS FG + Y ++ + F++D +
Sbjct: 1519 YTASVRENSPTSTSVVKVSASDRDS--FGSLSYSIVGGKD--SDKFSIDQRSGIISTADV 1574
Query: 71 ---------EHQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
Q + D G LS+ V I++ D ND +P+F S Y S+ E +
Sbjct: 1575 LDRELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKFDSSSYSSSILENSAPSS 1634
Query: 120 VG-RVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ ATDADEG NA + Y++ + F++ A++G I + LD E + Y
Sbjct: 1635 FSFKLAATDADEGTNARITYNLSRNDAFMIGASSGVITLAQPLDRENKSTY 1685
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 78/172 (45%), Gaps = 21/172 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ----------- 77
+G + V ATD+D G V Y ++ +T A + ++ + I
Sbjct: 1323 IGSRVAVVTATDRDEGSNAQVFYSIVRGDTSAFAINAMNGVLTVKKEINRETVPTYTLTI 1382
Query: 78 ---DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEG 131
D G ++S + + V D+ND P F S Y SV E +V V A D+D G
Sbjct: 1383 RASDRGSPMMTSDKELTVVVNDVNDNPPVFNSQSYIGSVRENSAQSTSVLTVAADDSDVG 1442
Query: 132 QNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY-LERVFLISKF 179
NAV+ YS+ ++ F +++ +G I T LD+E++ Y LE SK+
Sbjct: 1443 ANAVLRYSIISGNDEKRFKINSTSGVIMTTTPLDFEEKSQYGLEVTATDSKY 1494
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 69/158 (43%), Gaps = 25/158 (15%)
Query: 35 QVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE----HQGP-------------IQ 77
QV ATD+DS G + + ++ N D F +D +T + P +
Sbjct: 394 QVSATDRDSSTNGALVFGIIKGNDDGV--FTIDGSTGIISIAKSPDYENKTRYDLTVQAR 451
Query: 78 DEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEG-QN 133
D G TA V I + D+ND +P F Y +PE G V V ATD D G +
Sbjct: 452 DRGVPVKYDTAQVTIFIEDVNDHSPVFSPSNYSKQIPESTVIGSTVVTVTATDLDSGPRG 511
Query: 134 AVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
+ Y + ++ F +DAN+G IR + LD E Y
Sbjct: 512 RLEYRLISGNVKGAFNIDANSGSIRVSSELDRETTPSY 549
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 69/167 (41%), Gaps = 35/167 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------------------- 68
G + Q+ ATD+D G G V Y ++ N + F LDP
Sbjct: 805 GTRVGQLTATDRDIGPNGAVTYAIISGN--QGNSFQLDPRSGILSVRSTLDRETIPSYTL 862
Query: 69 ---ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVH 124
A++ P Q S TA++++ V D+ND P F+ + + E V +V
Sbjct: 863 VVKASDAGSPQQ-----SITASIHVSVLDVNDNAPRFEKSLFSGEIREDASVHSTVLQVK 917
Query: 125 ATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
D DEG N + S+ + F +D+ TG + + LDYE Y
Sbjct: 918 VEDKDEGSNGAITLSLSGEGSDNFTIDS-TGFVLSKTPLDYETTAAY 963
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 73/170 (42%), Gaps = 17/170 (10%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL----DNNTDAASYFNLD---- 67
SLF G + R+ + T++QVK DKD G G + L DN T ++ F L
Sbjct: 897 SLFSGEI-REDASVHSTVLQVKVEDKDEGSNGAITLSLSGEGSDNFTIDSTGFVLSKTPL 955
Query: 68 -----PATEHQGPIQDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEG-QDGLA 119
A + +D G S +AT +++T ++ND P F S S+PE
Sbjct: 956 DYETTAAYQLTVTARDGGSPSKSATAQVKITIINVNDNVPSFVSPAQVTSIPEDVAINTH 1015
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V +++ATD+D F +D ++G I K LD E Y
Sbjct: 1016 VVKLNATDSDGTPLTFDIVEGNAGSSFKIDQSSGLISVAKRLDRETTANY 1065
Score = 39.3 bits (90), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 69/175 (39%), Gaps = 16/175 (9%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----LDPA 69
+S Y R+ +++ V A D D G ++ Y ++ N + N +
Sbjct: 1413 NSQSYIGSVRENSAQSTSVLTVAADDSDVGANAVLRYSIISGNDEKRFKINSTSGVIMTT 1472
Query: 70 TEHQGPIQDEGGLSSTAT---------VNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLA 119
T + + GL TAT V IRV ++ND P F Y SV E +
Sbjct: 1473 TPLDFEEKSQYGLEVTATDSKYTAKTNVTIRVINLNDITPAFTQQNYTASVRENSPTSTS 1532
Query: 120 VGRVHATDADE-GQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V +V A+D D G + + F +D +G I T LD E LY +V
Sbjct: 1533 VVKVSASDRDSFGSLSYSIVGGKDSDKFSIDQRSGIISTADVLDRELVSLYAIQV 1587
Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 60/148 (40%), Gaps = 15/148 (10%)
Query: 36 VKATDKDSGKFGLVEYRLLDN------NTDAASYFNLDPATEHQGP------IQDEGGLS 83
V ATD+DSG + Y L N+ + P +H+ I G
Sbjct: 91 VTATDRDSGTNAAITYSLFSGENKFMMNSKTGEIRTVTPL-DHETKDSYTMRISAFDGKH 149
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYS-VP 141
+T I V D+ND P F Y+ V E G V ++ A D D G NA + YS V
Sbjct: 150 TTFVPLITVDDVNDNAPFFALSVYKTGVYEDVAVGSIVRQLTAVDLDVGINARLSYSLVS 209
Query: 142 EDIPFVVDANTGDIRTNKALDYEKQQLY 169
D + + G IRT A D E + Y
Sbjct: 210 GDTSYFTVDSQGVIRTKGAFDRETKASY 237
Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 22/117 (18%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG------P 75
+M++ A+D D+G + + LL N + S F LD T E Q
Sbjct: 1738 VMRILASDADTGLNAELTFSLLSN--EHKSVFTLDNTTGDISTKVPLDREQQAVYTLRIG 1795
Query: 76 IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ D+G LSS A V I V D +D P FQ Y ++ E G ++ +V A D D
Sbjct: 1796 VADKGNPSLSSVADVIIDVIDEDDNCPRFQPTEYNVTISESLPRGASIVQVTARDID 1852
>gi|62643091|ref|XP_229369.3| PREDICTED: cadherin-12-like [Rattus norvegicus]
gi|109466218|ref|XP_001062023.1| PREDICTED: cadherin-12-like [Rattus norvegicus]
Length = 794
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + +G ++QVKATD D +G V Y +L YF++DP T
Sbjct: 165 YVASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQ----GQPYFSIDPKTGVIRT 220
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGL+ T VNI +TD+ND P F + VPE
Sbjct: 221 ALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPE 280
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYS-VPED----IPFVVDANT--GDIRTNKALDYEK 165
G A+GR+ A D D G+NA + Y+ VP D V D +T G I+ K LD+E
Sbjct: 281 SSPVGSAIGRIRAVDPDFGKNAEIEYNIVPGDGGNLFDIVTDEDTQEGIIKLKKPLDFET 340
Query: 166 QQLYLERV 173
++ Y +V
Sbjct: 341 KKAYTFKV 348
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY SVPE G V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKVQDINDNEPKFLDGPYVASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQP 207
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F +D TG IRT +D E ++ Y
Sbjct: 208 YFSIDPKTGVIRTALPNMDREVKEQY 233
>gi|291395181|ref|XP_002714131.1| PREDICTED: cadherin 10, type 2 [Oryctolagus cuniculus]
Length = 788
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 164 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 222
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F V E
Sbjct: 223 PNMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESS 282
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G A+G V ATDAD G+NA V Y + + DI D G I K LDYE ++
Sbjct: 283 PVGTAIGSVKATDADTGKNAEVEYRIIDGDGTDMFDIITEKDTQEGIITVKKQLDYESRR 342
Query: 168 LYLERV 173
LY +V
Sbjct: 343 LYTLKV 348
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|344272204|ref|XP_003407925.1| PREDICTED: cadherin-12 [Loxodonta africana]
Length = 794
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + +G ++QVKATD D +G V Y +L YF++DP T
Sbjct: 165 YVASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQ----GQPYFSIDPKTGVIRT 220
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGL+ T VNI +TD+ND P F + VPE
Sbjct: 221 ALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPE 280
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYS-VPED----IPFVVDANT--GDIRTNKALDYEK 165
G A+GR+ A D D G+NA + Y+ VP D V D +T G I+ K LD+E
Sbjct: 281 SSPVGSAIGRIRAVDPDFGKNAEIEYNIVPGDGGNLFDIVTDEDTQEGVIKLKKPLDFET 340
Query: 166 QQLYLERV 173
++ Y +V
Sbjct: 341 KKAYTFKV 348
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY SVPE G V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKVQDINDNEPKFLDGPYVASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQP 207
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F +D TG IRT +D E ++ Y
Sbjct: 208 YFSIDPKTGVIRTALPNMDREVKEQY 233
>gi|73953936|ref|XP_854194.1| PREDICTED: cadherin-10 isoform 1 [Canis lupus familiaris]
Length = 788
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 164 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 222
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F V E
Sbjct: 223 PNMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESS 282
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G A+G V ATDAD G+NA V Y + + DI D G I K LDYE ++
Sbjct: 283 PVGTAIGSVKATDADTGKNAEVEYRIIDGDGTDMFDIITEKDTQEGIITVKKPLDYESRR 342
Query: 168 LYLERV 173
LY +V
Sbjct: 343 LYTLKV 348
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|395735689|ref|XP_002815502.2| PREDICTED: cadherin-10 [Pongo abelii]
Length = 792
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 164 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 222
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F V E
Sbjct: 223 PNMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESS 282
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G A+G V ATDAD G+NA V Y + + DI D G I K LDYE ++
Sbjct: 283 PVGTAIGSVKATDADTGKNAEVEYRIIDGDGTDMFDIVTEKDTQEGIITVKKPLDYESRR 342
Query: 168 LYLERV 173
LY +V
Sbjct: 343 LYTLKV 348
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|61806606|ref|NP_001013538.1| cadherin-6 precursor [Danio rerio]
gi|54306049|dbj|BAD66654.1| cadherin 6 [Danio rerio]
Length = 794
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 87/187 (46%), Gaps = 33/187 (17%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---- 70
D Y A + +G + QV A D D FG +L + + YF+++P T
Sbjct: 155 DKEVYTASVPEGSHIGTFVTQVTAQDADDEMFGY-SAKLAYSIKEGHPYFSVEPNTGIIR 213
Query: 71 -------------EHQGPIQD-------EGGLSSTATVNIRVTDINDKNPEFQSLPYEFS 110
EH + + +GGL + TVNI +TDIND P F+ Y+FS
Sbjct: 214 TALGPTDMDREQREHYQVVIEAKDMAGQKGGLIGSTTVNISLTDINDNAPHFKQGIYQFS 273
Query: 111 VPE-GQDGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALD 162
VPE + G +VGR+ A DAD G+NA + YS+ DI + G + K LD
Sbjct: 274 VPELTKVGSSVGRIEAEDADIGRNAEMSYSITGGDSLDVFDISTDRNTQEGILTVKKPLD 333
Query: 163 YEKQQLY 169
YEK++ Y
Sbjct: 334 YEKKKSY 340
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
+++ DIND P+F Y SVPEG G V +V A DAD+ G +A + YS+ E P
Sbjct: 142 VKLHDINDNEPKFDKEVYTASVPEGSHIGTFVTQVTAQDADDEMFGYSAKLAYSIKEGHP 201
Query: 146 -FVVDANTGDIRTNKA---LDYEKQQLY 169
F V+ NTG IRT +D E+++ Y
Sbjct: 202 YFSVEPNTGIIRTALGPTDMDREQREHY 229
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G + +G++H +D D G V+Y E FV+DAN+GD+ ++LD E++ Y
Sbjct: 63 GSEHQYIGKLH-SDMDRGDGTVMYVLTGEGAGTIFVIDANSGDLHATRSLDREEKPSYSL 121
Query: 172 RVFLISK 178
R +++
Sbjct: 122 RAQAVNR 128
>gi|311273524|ref|XP_003133908.1| PREDICTED: cadherin-10 [Sus scrofa]
Length = 788
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 164 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 222
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F V E
Sbjct: 223 PNMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESS 282
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G A+G V ATDAD G+NA V Y + + DI D G I K LDYE ++
Sbjct: 283 PVGTAIGSVKATDADTGKNAEVEYRIIDGDGTDMFDIITEKDTQEGIITVKKPLDYESRR 342
Query: 168 LYLERV 173
LY +V
Sbjct: 343 LYTLKV 348
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|440907670|gb|ELR57787.1| Cadherin-10 [Bos grunniens mutus]
Length = 788
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 164 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 222
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F V E
Sbjct: 223 PNMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESS 282
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G A+G V ATDAD G+NA V Y + + DI D G I K LDYE ++
Sbjct: 283 PVGTAIGSVKATDADTGKNAEVEYRIIDGDGTDMFDIITEKDTQEGIITVKKPLDYESRR 342
Query: 168 LYLERV 173
LY +V
Sbjct: 343 LYTLKV 348
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|124249202|ref|NP_033995.1| cadherin-10 precursor [Mus musculus]
gi|341940565|sp|P70408.3|CAD10_MOUSE RecName: Full=Cadherin-10; AltName: Full=T2-cadherin; Flags:
Precursor
gi|74216076|dbj|BAE23714.1| unnamed protein product [Mus musculus]
Length = 788
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 164 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 222
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F V E
Sbjct: 223 PNMNRENKEQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESS 282
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G AVG V ATDAD G+NA V Y + + DI D G I K LDYE ++
Sbjct: 283 PVGTAVGSVKATDADTGKNAEVDYRIIDGDGTDMFDIITEKDTQEGIITVKKPLDYENRR 342
Query: 168 LYLERV 173
LY +V
Sbjct: 343 LYTLKV 348
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|148676983|gb|EDL08930.1| mCG123390, isoform CRA_d [Mus musculus]
gi|148676984|gb|EDL08931.1| mCG123390, isoform CRA_d [Mus musculus]
Length = 789
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 165 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 223
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F V E
Sbjct: 224 PNMNRENKEQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESS 283
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G AVG V ATDAD G+NA V Y + + DI D G I K LDYE ++
Sbjct: 284 PVGTAVGSVKATDADTGKNAEVDYRIIDGDGTDMFDIITEKDTQEGIITVKKPLDYENRR 343
Query: 168 LYLERV 173
LY +V
Sbjct: 344 LYTLKV 349
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 149 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 208
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 209 YFSVEPETGIIRT 221
>gi|18369837|gb|AAL67951.1|AF183946_1 transmembrane glycoprotein cadherin-10 [Mus musculus]
Length = 788
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 164 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 222
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F V E
Sbjct: 223 PNMNRENKEQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESS 282
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G AVG V ATDAD G+NA V Y + + DI D G I K LDYE ++
Sbjct: 283 PVGTAVGSVKATDADTGKNAEVDYRIIDGDGTDMFDIITEKDTQEGIITVKKPLDYENRR 342
Query: 168 LYLERV 173
LY +V
Sbjct: 343 LYTLKV 348
Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIN P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKIHDINGNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|426246688|ref|XP_004017124.1| PREDICTED: cadherin-10 [Ovis aries]
Length = 788
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 164 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 222
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F V E
Sbjct: 223 PNMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESS 282
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G A+G V ATDAD G+NA V Y + + DI D G I K LDYE ++
Sbjct: 283 PVGTAIGSVKATDADTGKNAEVEYRIIDGDGTDMFDIITEKDTQEGIITVKKPLDYESRR 342
Query: 168 LYLERV 173
LY +V
Sbjct: 343 LYTLKV 348
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|274323706|ref|NP_001162102.1| cadherin-10 precursor [Rattus norvegicus]
Length = 788
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 164 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 222
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F V E
Sbjct: 223 PNMNRENKEQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESS 282
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G AVG V ATDAD G+NA V Y + + DI D G I K LDYE ++
Sbjct: 283 PVGTAVGSVKATDADTGKNAEVDYRIIDGDGTDMFDIITEKDTQEGIITVKKPLDYENRR 342
Query: 168 LYLERV 173
LY +V
Sbjct: 343 LYTLKV 348
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|274325621|ref|NP_001069734.2| cadherin-10 precursor [Bos taurus]
gi|296475703|tpg|DAA17818.1| TPA: cadherin 10, type 2 (T2-cadherin) [Bos taurus]
Length = 788
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 164 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 222
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F V E
Sbjct: 223 PNMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESS 282
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G A+G V ATDAD G+NA V Y + + DI D G I K LDYE ++
Sbjct: 283 PVGTAIGSVKATDADTGKNAEVEYRIIDGDGTDMFDIITEKDTQEGIITVKKPLDYESRR 342
Query: 168 LYLERV 173
LY +V
Sbjct: 343 LYTLKV 348
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|148676973|gb|EDL08920.1| mCG112811 [Mus musculus]
Length = 337
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 79/173 (45%), Gaps = 37/173 (21%)
Query: 30 GVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---------------E 71
G +++QV ATD D +G V Y +L YF++DP T E
Sbjct: 49 GTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREARE 104
Query: 72 HQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
H + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG++
Sbjct: 105 HYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVGKI 164
Query: 124 HATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
A DAD G NA + YS+ I D G + K L+YEK++ Y
Sbjct: 165 KANDADTGSNADMTYSITNGDGIGVFSISTDKDTREGILSLKKPLNYEKKKSY 217
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 66/144 (45%), Gaps = 20/144 (13%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYF--------NLDPATEHQGPIQDEGGLSSTATVN 89
+TDKD+ + G++ + N SY +LD H GP +D L
Sbjct: 193 STDKDT-REGILSLKKPLNYEKKKSYTLNIEGANTHLDFRFSHLGPFKDATML------K 245
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYY---SVPEDIP 145
+ V D+ D+ P F Y V E + G VG V A D D + V Y+ S E+
Sbjct: 246 VIVGDV-DEPPLFSMPSYVMEVYENAKIGTIVGTVLAQDPDSANSLVRYFINHSTEEERF 304
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DANTG I+T+K LD E+ Y
Sbjct: 305 FNIDANTGTIKTSKVLDREETPWY 328
>gi|30354729|gb|AAH52056.1| Cadherin 10 [Mus musculus]
gi|38565914|gb|AAH62962.1| Cadherin 10 [Mus musculus]
Length = 788
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 164 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 222
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F V E
Sbjct: 223 PNMNRENKEQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESS 282
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G AVG V ATDAD G+NA V Y + + DI D G I K LDYE ++
Sbjct: 283 PVGTAVGSVKATDADTGKNAEVDYRIIDGDGTDMFDIITEKDTQEGIITVKKPLDYENRR 342
Query: 168 LYLERV 173
LY +V
Sbjct: 343 LYTLKV 348
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|351694356|gb|EHA97274.1| Cadherin-6 [Heterocephalus glaber]
Length = 790
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 89/188 (47%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 164 YTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKT 219
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F E
Sbjct: 220 ALHNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTAE 279
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEK 165
G +GR+ A+DAD G+NA + YS+ + D+ + G I K LD+EK
Sbjct: 280 SSPPGTPIGRIKASDADVGENAKIVYSITDGEGLDMFDVITDQETQEGIITVKKLLDFEK 339
Query: 166 QQLYLERV 173
+++Y +V
Sbjct: 340 KKVYTLKV 347
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPIFTEEVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 207 YFSVESETGIIKTALHNMDRENREQY 232
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H+ D D G ++ Y + F+++ NTGDI+ K LD EK+ +Y+
Sbjct: 68 GSDYQYVGKLHS-DQDRGDGSLKYILSGDGAGDLFIINENTGDIQATKRLDREKKPVYIL 126
Query: 172 RVFLISK 178
R +++
Sbjct: 127 RAQAVNR 133
>gi|327274092|ref|XP_003221812.1| PREDICTED: protocadherin Fat 4-like [Anolis carolinensis]
Length = 4863
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 80/166 (48%), Gaps = 22/166 (13%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLDPATE 71
+ H +G L V A DKD+ GLV+Y + N D A + + +
Sbjct: 3144 ESHAVGAILRTVSARDKDAAMNGLVKYNISSGNEDGNFAINASTGALSLAKPLDYEVCQK 3203
Query: 72 HQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
H+ I D G ++ T ++ + V D+ND +P F Y SV E G V + AT
Sbjct: 3204 HEMSISAIDGGWVARTGYCSITVNVIDVNDNSPVFSPEDYFPSVLENAPSGTTVIHLSAT 3263
Query: 127 DADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
DAD G NAV+ Y+V D+ FV+D NTG I T LDYE +Q Y
Sbjct: 3264 DADSGSNAVIAYAVQSSDSDL-FVIDPNTGIITTQGFLDYETKQSY 3308
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 75/161 (46%), Gaps = 23/161 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ + A F++DP + E +
Sbjct: 1800 GSKIMQLTAMDADEGANALVTYTII---SGADGSFHIDPESGELIATKRLDRERRSKYSL 1856
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G SS +NI V+D+ND P+F L Y F +PE G V + ATD D G
Sbjct: 1857 LVRADDGLQSSDMRINITVSDVNDHIPKFSKLWYSFDIPEDTTPGSLVAAILATDEDSGV 1916
Query: 133 NAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
N + Y+V E D F ++ TG LDYE QQ Y+
Sbjct: 1917 NGEITYTVSEDDGDGTFFLNPVTGVFNLTCMLDYEMQQYYI 1957
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 75/165 (45%), Gaps = 30/165 (18%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTD----------------------AASYFNLDPAT 70
++ V A DKDSG G + Y ++ N D A Y A+
Sbjct: 2731 IITVTAADKDSGPNGQLNYEIISGNVDNSFSIHRANGEIRSVRPLDRENVAQYMLTIKAS 2790
Query: 71 EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
+ P+Q S++ V I V D ND P+F + + VPE G V RV +D D
Sbjct: 2791 DRGTPVQ-----SASVQVLINVLDENDNAPKFSQI-FSALVPENAPLGYTVTRVTTSDED 2844
Query: 130 EGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
G NAV YS+ E + PFV++ NTGDI ++ L+ E Y RV
Sbjct: 2845 IGVNAVSRYSLKETNTPFVINPNTGDITISRLLNREDADRYRIRV 2889
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 78/160 (48%), Gaps = 25/160 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------EHQGP------IQ 77
+++V A+D D GK GL+ Y ++ N + F +D +T +H+ IQ
Sbjct: 1273 VLRVSASDVDEGKNGLIHYSVIKGNEEKQ--FTIDNSTGQVTLIGKLDHEATASYSLTIQ 1330
Query: 78 --DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQ 132
D G LSS T+NI V D ND +P F V E + G V V ATD+D G
Sbjct: 1331 AVDSGAVSLSSVCTLNIEVLDENDNSPSFPKSTLFVDVLENMRIGELVSSVTATDSDSGD 1390
Query: 133 NAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
NA ++YS+ F + NTG I KALD+E Q +Y
Sbjct: 1391 NADLHYSITGTNNHGTFSISPNTGSIFLAKALDFETQSMY 1430
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 14/164 (8%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYF 64
S + A+ + LG T+ +V +D+D G + Y L + NT +
Sbjct: 2818 SQIFSALVPENAPLGYTVTRVTTSDEDIGVNAVSRYSLKETNTPFVINPNTGDITISRLL 2877
Query: 65 NLDPATEHQGPIQ-DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGR 122
N + A ++ + + G + + V I VTDIND +P F Y PE + G V +
Sbjct: 2878 NREDADRYRIRVSAHDSGWTVSTDVTIFVTDINDNSPRFTKPSYYLDCPELNEIGSKVTQ 2937
Query: 123 VHATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
+ ATD DEG N V+Y + F ++A+TG+I ++L ++
Sbjct: 2938 ISATDPDEGSNGQVFYFIKSQSEFFRINASTGEIFNKQSLKFQN 2981
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 75/178 (42%), Gaps = 38/178 (21%)
Query: 30 GVTLMQVKATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP---IQDEGGLSS 84
G L+ ATD DSG G+ YR++ N N+ +G + GGL
Sbjct: 141 GRQLILDTATDADSGTNGVDHSSYRIVGGNEGGRFRLNITLNPSGEGAFLHLVSRGGLDR 200
Query: 85 TAT----------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
AT VN+ V DIND P F Y+ VPE G +V
Sbjct: 201 EATPAYQLLLQVEDKGEPRKRGYLQVNVTVQDINDNPPVFSQTLYQARVPEDAPVGASVL 260
Query: 122 RVHATDADEGQNAVVYYSV----------PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V A DADEG NA + Y + +PF VD +G IR +ALDYE ++ Y
Sbjct: 261 QVTAADADEGTNADIRYRLEGAESAGVDGAGALPFEVDPESGVIRIREALDYELRRQY 318
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 18/168 (10%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF---NLDPAT 70
D L Y + + V A+DKDSG+ G + Y +++ NT DA F L +
Sbjct: 1041 DQLSYEVTISELEPVNSRFFSVHASDKDSGENGEIAYNIIEGNTGDAFGIFPDGQLYIKS 1100
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
E +Q+ LS+T V++ + D+ND P F S Y F E Q G
Sbjct: 1101 ELDRELQERYTLVVAASDRAVEPLSATVNVSVILEDVNDNRPLFNSTNYAFYYEEEQVGG 1160
Query: 119 A-VGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
+ VG++ A D D G N V YS P F ++A +G+I++ LD E
Sbjct: 1161 SFVGKISAFDKDSGSNGEVRYSFEHMQPDFELNAISGEIKSTHQLDRE 1208
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 73/157 (46%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +ATD DSG +EY LL+ + S +D G + D
Sbjct: 2113 VFKAQATDPDSGPNSYIEYSLLNPSGKKFSIGTIDGEVRLTGELDRETVSNYTLTIIATD 2172
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y+ + E G V +V +TD DEG N
Sbjct: 2173 KGQPSLSSSTNVVVVVLDINDNNPVFAQKLYKIEIAENILTGTDVVQVSSTDGDEGSNGQ 2232
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y++ + F +D+ TG I K+LD EK+ Y
Sbjct: 2233 VRYAIISGNINNEFRIDSVTGVITVGKSLDREKKPSY 2269
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 76/165 (46%), Gaps = 26/165 (15%)
Query: 29 LGVTLMQVKATD-KDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--------------- 72
+G L++V A D KD G VEY LL+N D S FNLD T
Sbjct: 3042 VGTKLIKVTAVDTKDFGLNSEVEYLLLNN--DLMSKFNLDHNTGWISVGSSLINDMNKNF 3099
Query: 73 --QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR-VHATD 127
+ +D+G LSS TV I VT+ N PEF +V E A+ R V A D
Sbjct: 3100 LIKVKAKDKGNPPLSSEVTVQIVVTEENYHTPEFSQSHESITVLESHAVGAILRTVSARD 3159
Query: 128 ADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
D N +V Y++ ED F ++A+TG + K LDYE Q +
Sbjct: 3160 KDAAMNGLVKYNISSGNEDGNFAINASTGALSLAKPLDYEVCQKH 3204
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 68/165 (41%), Gaps = 32/165 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGG-------- 81
G T+ Q KA D D G G+V Y L N D S A GP+ G
Sbjct: 953 GHTIFQAKAVDPDEGINGIVLYSLKQNPKDLFSVNEQSGAISLTGPLDINAGSYQVEIMA 1012
Query: 82 -------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
SS+ + + V D+ND +P F L YE ++ E + VHA+D D G+N
Sbjct: 1013 SDLGVPRRSSSFILTVSVHDVNDNSPVFDQLSYEVTISELEPVNSRFFSVHASDKDSGEN 1072
Query: 134 AVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLY 169
+ Y+ +++ NTGD + LD E Q+ Y
Sbjct: 1073 GEIAYN-------IIEGNTGDAFGIFPDGQLYIKSELDRELQERY 1110
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 81/165 (49%), Gaps = 27/165 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGP---- 75
G ++QV +TD D G G V Y ++ N + + F +D T + P
Sbjct: 2214 GTDVVQVSSTDGDEGSNGQVRYAIISGNIN--NEFRIDSVTGVITVGKSLDREKKPSYSL 2271
Query: 76 -IQDEGGLSS----TATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA--VGRVHATDA 128
+Q SS T TV+I + D+ND P F+ PY +VPE + L + +V A D
Sbjct: 2272 TVQSADRGSSPRIDTTTVSIILIDVNDYIPTFELSPYSVNVPENLEKLPKLILQVVARDD 2331
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D+G N+ + Y + ED F + + +GDI K+LD EK++ Y+
Sbjct: 2332 DQGLNSKLTYLLVGGNEDGAFTL-SPSGDIHLVKSLDREKKEQYV 2375
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 71/164 (43%), Gaps = 32/164 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3254 GTTVIHLSATDADSGSNAVIAYAVQSSDSD---LFVIDPNT---GIITTQGFLDYETKQS 3307
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHAT 126
S A VNI + N+ P F S Y F V E G VG V A+
Sbjct: 3308 YHLTIKAFNVPDEERCSFANVNIHLKGTNEYVPRFVSKLYYFEVSEAAAKGTIVGEVFAS 3367
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQ 167
D D G + V+Y + F +D ++G I LD EK++
Sbjct: 3368 DRDTGTDGEVHYLIFGNSRKKGFQIDVSSGQIYVTGPLDREKEE 3411
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L ATV + + DIND P+F Y+ +V E L V RV A+D DEG+N +++YSV
Sbjct: 1234 LRDQATVQVYLKDINDNVPKFLKELYQATVSELAANLTQVLRVSASDVDEGKNGLIHYSV 1293
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E+ F +D +TG + LD+E Y
Sbjct: 1294 IKGNEEKQFTIDNSTGQVTLIGKLDHEATASY 1325
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 71/159 (44%), Gaps = 28/159 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAA---------------------SYFNLDPATE 71
++QV A D D G + Y L+ N D A Y L AT+
Sbjct: 2323 ILQVVARDDDQGLNSKLTYLLVGGNEDGAFTLSPSGDIHLVKSLDREKKEQYVMLITATD 2382
Query: 72 HQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE 130
P L+ T T+ ++V D+ND P+F Y ++PE G V V+++DAD
Sbjct: 2383 SGSPT-----LTGTGTIAVKVDDVNDNIPKFAFNMYLKTIPEDAPTGTDVLLVNSSDADA 2437
Query: 131 GQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
NA++ S + F ++ +TG I T+ LD E ++ Y
Sbjct: 2438 SVNAIISLS-GGNSQFTINPSTGQIITSALLDRETKENY 2475
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 71/159 (44%), Gaps = 20/159 (12%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY-------FNLDPATEHQGP------- 75
G + + ATD+DSG G + Y + +++ D + FNL +++
Sbjct: 1901 GSLVAAILATDEDSGVNGEITYTVSEDDGDGTFFLNPVTGVFNLTCMLDYEMQQYYILTI 1960
Query: 76 -IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQN 133
+D GG S T V I + D+ND P F Y S+ E G + + TDAD+G N
Sbjct: 1961 RAEDGGGQSITVRVYINILDVNDNAPIFSMDSYSTSLMENLSPGSTIFLFNVTDADDGSN 2020
Query: 134 AVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLY 169
+ + YS+ F +D N G + + LD E Q Y
Sbjct: 2021 SQLSYSITSGDSLSQFNIDKN-GILSIRQPLDRESQSFY 2058
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 76/178 (42%), Gaps = 28/178 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y + ++ +G ++ ++A + + G VEY ++ + + L H G IQ
Sbjct: 1678 YITILKEGEPIGTNVISIEAASPRANE-GPVEYFIVSVRCEDKMFGRLFTIGRHTGVIQT 1736
Query: 79 EGGL------------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
L + A V I + D+ND P F + + +V E
Sbjct: 1737 AAILDREQGARLYLVDVYAIEKSAALPRTQRAEVEITLQDVNDNPPVFPTDMLDLTVEEN 1796
Query: 115 -QDGLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
DG + ++ A DADEG NA+V Y++ D F +D +G++ K LD E++ Y
Sbjct: 1797 IGDGSKIMQLTAMDADEGANALVTYTIISGADGSFHIDPESGELIATKRLDRERRSKY 1854
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 70/171 (40%), Gaps = 31/171 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS---------YFNLDPATEHQGPI---- 76
G L+ + A D D G G V + L + ++ F LDP + I
Sbjct: 633 GTELLVLTAIDGDLGDNGTVRFSLQETEPGVSAGGPFVAPWRIFRLDPVSGRLSTISQLD 692
Query: 77 QDEGG---------------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAV 120
++E G LSS VN+ + D+ND +P F + Y + E + G V
Sbjct: 693 REEQGHYSLQVLATDLGYPTLSSVVQVNVSLLDVNDNSPLFYPVQYFAHIQENEPAGSYV 752
Query: 121 GRVHATDADEGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V A+D D G N V Y++ + F + TG I + LD E++ Y
Sbjct: 753 ATVSASDPDLGINGTVRYTISAGDTSRFQIHNQTGVITSKTVLDREEKTAY 803
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYS 139
LSS+ +V + + D+ND P+FQ PY +P G V V TDAD G NA ++YS
Sbjct: 2489 ALSSSTSVLVTIADVNDNPPKFQHHPYVTHIPSPTSSGTFVFAVTVTDADAGPNAELHYS 2548
Query: 140 V 140
+
Sbjct: 2549 L 2549
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY 138
G ++ A VNI V D+ND +P F V E G + + A D DEG N +V Y
Sbjct: 915 GAIAGDALVNITVKDLNDNSPHFLHAVESVDVVENWSTGHTIFQAKAVDPDEGINGIVLY 974
Query: 139 SV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
S+ P+D+ F V+ +G I LD +E
Sbjct: 975 SLKQNPKDL-FSVNEQSGAISLTGPLDINAGSYQVE 1009
Score = 42.4 bits (98), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
SS A + I V DIND P F+ P+ V E + V A D D G N + Y +
Sbjct: 2693 FSSYAKLEITVIDINDNMPVFEQDPFIVEVVENIPPSKIITVTAADKDSGPNGQLNYEII 2752
Query: 142 E---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
D F + G+IR+ + LD E Y+
Sbjct: 2753 SGNVDNSFSIHRANGEIRSVRPLDRENVAQYM 2784
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 67/173 (38%), Gaps = 27/173 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA----------TEHQG----- 74
G T+ TD D G + Y + + D+ S FN+D E Q
Sbjct: 2004 GSTIFLFNVTDADDGSNSQLSYSI--TSGDSLSQFNIDKNGILSIRQPLDRESQSFYSLI 2061
Query: 75 -PIQDEGGL-----SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+ D L +ST V+I + D+ND P F S P +PE V + ATD
Sbjct: 2062 VQVHDMASLPTSRFTSTTQVSIILLDVNDNPPSFIS-PKLTYIPENTPVDTIVFKAQATD 2120
Query: 128 ADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
D G N+ + YS+ P F + G++R LD E Y + K
Sbjct: 2121 PDSGPNSYIEYSLLNPSGKKFSIGTIDGEVRLTGELDRETVSNYTLTIIATDK 2173
Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---PEDI 144
V I VTD ND P F S + P G + + A D DEG N V Y + DI
Sbjct: 1559 VTILVTDQNDNVPAFVSQNALAADPSVMIGTVLTTIVAADPDEGANGEVEYEIINGDRDI 1618
Query: 145 PFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
F+VD +G++R + L Q +Y F+IS
Sbjct: 1619 -FLVDRYSGELRVSSPL-VPSQLMY---TFIIS 1646
Score = 36.2 bits (82), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 68/166 (40%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG + Y + N F++ P T E Q
Sbjct: 1373 RIGELVSSVTATDSDSGDNADLHYSITGTNNHGT--FSISPNTGSIFLAKALDFETQSMY 1430
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G SST +V I V D ND P+F S+ E G +V V A D
Sbjct: 1431 KLNITAKDKGRPPQSSTMSVVIYVRDYNDNPPKFPPGDIFKSIVENIPVGSSVISVTAHD 1490
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + Y++ + +P F +D G I T+ +D E L+
Sbjct: 1491 PDADINGQLVYTIIQQMPRGNHFQIDEVKGTIYTSAEIDREFANLF 1536
Score = 35.8 bits (81), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 16/107 (14%)
Query: 84 STATVNIRVTDINDKNPEF-QSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVP 141
S A + + + D+ND+ P+F Q Y SV E G + + A D D G N V +S+
Sbjct: 598 SYAQLVVNILDVNDERPQFSQPDGYHVSVAENSPSGTELLVLTAIDGDLGDNGTVRFSLQ 657
Query: 142 EDIP--------------FVVDANTGDIRTNKALDYEKQQLYLERVF 174
E P F +D +G + T LD E+Q Y +V
Sbjct: 658 ETEPGVSAGGPFVAPWRIFRLDPVSGRLSTISQLDREEQGHYSLQVL 704
>gi|240975980|ref|XP_002402241.1| protocadherin-16, putative [Ixodes scapularis]
gi|215491130|gb|EEC00771.1| protocadherin-16, putative [Ixodes scapularis]
Length = 2493
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 79/159 (49%), Gaps = 22/159 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDN-NTDAASYFNLDP---------------ATEHQGPI 76
+QV ATDKD+G + ++LL+ AS F + P A H +
Sbjct: 353 FLQVSATDKDTGNNARLTFKLLEGPGQQQASKFGIFPNNGFLYLKEQLDRETADHHTLAV 412
Query: 77 Q--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEG 131
+ D G LSSTATV +RV D ND +P F+ +EF VPE + G VG V A D D G
Sbjct: 413 EVVDNGSPALSSTATVQVRVLDANDNDPMFEKPVFEFFVPEDAEKGRRVGTVSAHDKDAG 472
Query: 132 QNAVVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
NA + YS V + F ++ TG+I T LD E + Y
Sbjct: 473 SNAALRYSLVNANGSFQINPVTGEIFTKVLLDRESKSSY 511
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 77/160 (48%), Gaps = 22/160 (13%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------EHQGP 75
E+G L + A D D+ ++ Y D +AS F +D + E Q
Sbjct: 1609 EVGSVLTTITANDVDTHP--VLTYTFADVGGGSASLFAVDRFSGRITLAGGPLDFERQSL 1666
Query: 76 IQDEGGLSSTA-----TVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
Q +S TA V + VTD+ND +P F Y +PE G ++ V+ATD D
Sbjct: 1667 YQLRLRVSDTAHMAETLVTVHVTDVNDNSPRFTQPSYHAILPESAGLGSSIITVNATDLD 1726
Query: 130 EGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQ 167
G NA ++YS+ E I F ++ NTG I TNK+L Y+ ++
Sbjct: 1727 SGNNAQIWYSLGESYSIGFYINENTGTIYTNKSLSYDPKK 1766
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 75/184 (40%), Gaps = 32/184 (17%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH 72
T + +Y + G ++QV ATDKD G+ V+Y + N D + F+LDP T
Sbjct: 1908 TFNQTYYEVFISEMATPGAVVIQVSATDKDEGRHAQVKYDITSGNED--NKFSLDPKT-- 1963
Query: 73 QGPIQDEGG-----------------------LSSTATVNIRVTDINDKNPEFQSLPY-E 108
G I G LSS +V IR+ D ND +P F Y E
Sbjct: 1964 -GTITVRGKLDYDTVPEFKLVVRAMDSDLESPLSSLVSVFIRIKDENDNSPHFPLAMYTE 2022
Query: 109 FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEK 165
F G V A DAD G + Y++ E F +D +TG I T DYE
Sbjct: 2023 FVEESSPIGTTVFTARAMDADRGLYGKLNYTMAEGEGRDKFRIDRDTGVITTEVVFDYES 2082
Query: 166 QQLY 169
+ Y
Sbjct: 2083 KNRY 2086
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 71/168 (42%), Gaps = 22/168 (13%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN---------------TDAASYFNLDP 68
R+ +G + V A D+D+G+ G + Y ++ N T A F +
Sbjct: 660 REGVPVGSQVGVVNAVDQDAGENGHITYAIVGGNLYDVFDIGKVSGVLYTTRAVDFEMAS 719
Query: 69 ATEHQGPIQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVH 124
Q D L SS V ++V D+ND P F+ P FSV E +G V
Sbjct: 720 EYTLQVTAADGSALNPRSSIINVRVKVEDVNDCAPTFEDDPVMFSVSESAPEGSVVWTFT 779
Query: 125 ATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
A D D G N V YS+ E P F +D+ TG + LDYE Q Y
Sbjct: 780 AKDLDSGANGEVQYSIVEQSPSPAFQLDSGTGALTLQSQLDYEVQPEY 827
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRV-HATDADEGQNAVVYYSVPE--DI 144
VN+ + D+ND P F+S + S+PE + V HA DAD G+N V Y++ E D
Sbjct: 216 VNVTIWDVNDNAPSFESPSLKISIPENVEVDTPTYVAHARDADGGRNGAVRYALAENPDG 275
Query: 145 PFVVDANTGDIRTNKALDYEKQQLY 169
F V A +G + ++LDYE +Q Y
Sbjct: 276 AFHVGAKSGSLMLRQSLDYEVRQKY 300
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 75/168 (44%), Gaps = 22/168 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGL-VEYRLLDNNTDAASYFN-----------L 66
Y A R+ G T+++V ATD D + + YR++D N + L
Sbjct: 1808 YRASIREDTPPGTTVIRVSATDLDISRDNHNINYRIMDGNAGGTFVVSGSLGEVILAKPL 1867
Query: 67 DPATEHQGPIQ----DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLA 119
D ++ D G +++TA V I + D+ND P F YE + E G
Sbjct: 1868 DREKVMMYSLKVVAIDRGTPSMNATAQVIISIDDVNDYAPTFNQTYYEVFISEMATPGAV 1927
Query: 120 VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYE 164
V +V ATD DEG++A V Y + ED F +D TG I LDY+
Sbjct: 1928 VIQVSATDKDEGRHAQVKYDITSGNEDNKFSLDPKTGTITVRGKLDYD 1975
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 72/166 (43%), Gaps = 29/166 (17%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------------- 70
E G + V A DKD+G + Y L++ N F ++P T
Sbjct: 456 EKGRRVGTVSAHDKDAGSNAALRYSLVNAN----GSFQINPVTGEIFTKVLLDRESKSSY 511
Query: 71 EHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYE--FSVPEGQD-GLAVGRVHA 125
E + D+G A V + V D+ND P F P E V E Q G + +V A
Sbjct: 512 EVTAEVHDQGTPPRFHRAIVKVVVADVNDNAPVFVE-PAETLVGVREEQPVGTELAQVQA 570
Query: 126 TDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLY 169
DADEG+NA V+Y + D F + +G + T LD+E+Q Y
Sbjct: 571 VDADEGKNADVFYEIRADGSPAFAIHRTSGVVTTRTVLDHEQQDYY 616
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAAS-----------YFNLD 67
+G T++ + ATD DS V Y + LD NT + +F L+
Sbjct: 878 VGFTVLHIIATDNDSRDNKRVSYVINSGNEKGHFALDINTGVLTVAKPLDREDVHHFVLN 937
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
+ G I LS+ +++ V D+ND P F Y +V E G +V VHAT
Sbjct: 938 VSVSDHGRIP----LSTFQVLHVYVQDVNDSPPRFLRERYLSNVSESAPVGTSVLTVHAT 993
Query: 127 DADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + + YS+P+ + F V+A TG + T LD E Y V++
Sbjct: 994 DKDLGASTNLSYSIPQGVAGNKFTVNARTGVVETAGPLDREDTATYEFAVYV 1045
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 77/170 (45%), Gaps = 24/170 (14%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQG 74
+ +EL V + + A+D+D G + Y + D N A + F +D T E Q
Sbjct: 1082 ENNELKV-IHTLVASDEDVGPNADIVYSITDGN--AGNKFGVDSRTGRLSSRPLDREMQS 1138
Query: 75 PI------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHA 125
+D G S T + + V D ND +P+F+ Y +VPE V V A
Sbjct: 1139 QFHLTVLARDRGSPPRSGTCNMTVHVLDQNDNDPQFEHSEYSATVPEDAPVNTTVLVVKA 1198
Query: 126 TDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
TD DEG N V YS+ + F +D++TG I T D EK+ Y+ V
Sbjct: 1199 TDHDEGSNGHVTYSLGNETASLFNIDSDTGVITTAGVFDREKKARYMFEV 1248
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 79/182 (43%), Gaps = 22/182 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL---------LDNNT------DAASY 63
Y A+ + LG +++ V ATD DSG + Y L ++ NT + SY
Sbjct: 1703 YHAILPESAGLGSSIITVNATDLDSGNNAQIWYSLGESYSIGFYINENTGTIYTNKSLSY 1762
Query: 64 FNLDPATEHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAV 120
P + D G S+ A V I++ D+N+ P F Y S+ E G V
Sbjct: 1763 DPKKPVVQLTVRATDRGVPSRSTVAAVRIQIADVNNNAPRFLESAYRASIREDTPPGTTV 1822
Query: 121 GRVHATDADEGQ-NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
RV ATD D + N + Y + + FVV + G++ K LD EK +Y +V I
Sbjct: 1823 IRVSATDLDISRDNHNINYRIMDGNAGGTFVVSGSLGEVILAKPLDREKVMMYSLKVVAI 1882
Query: 177 SK 178
+
Sbjct: 1883 DR 1884
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 22/171 (12%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA------ASYFNLDPATEHQGP-- 75
R++ +G L QV+A D D GK V Y + + + A + +H+
Sbjct: 556 REEQPVGTELAQVQAVDADEGKNADVFYEIRADGSPAFAIHRTSGVVTTRTVLDHEQQDY 615
Query: 76 -----IQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
+ +GG + + ++ + V D+ND P F + F V EG G VG V+A
Sbjct: 616 YSLVVVARDGGAPPMEARLSLKVHVLDLNDNQPTFFTSSLSFQVREGVPVGSQVGVVNAV 675
Query: 127 DADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
D D G+N + Y++ D+ F + +G + T +A+D+E Y +V
Sbjct: 676 DQDAGENGHITYAIVGGNLYDV-FDIGKVSGVLYTTRAVDFEMASEYTLQV 725
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 16/139 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAAS---YF 64
Y + +G T+ +A D D G +G + Y + +D +T + F
Sbjct: 2019 MYTEFVEESSPIGTTVFTARAMDADRGLYGKLNYTMAEGEGRDKFRIDRDTGVITTEVVF 2078
Query: 65 NLDPATEHQGPI--QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVG 121
+ + + I D GG +T V + V ++ P F+ Y F+VP + G VG
Sbjct: 2079 DYESKNRYYFTILATDAGGKYATVQVQVDVASKDEYPPVFRQKMYRFAVPGDAPAGHIVG 2138
Query: 122 RVHATDADEGQNAVVYYSV 140
RV ATD D+G + + Y +
Sbjct: 2139 RVQATDVDQGPDGKIVYQI 2157
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 56/145 (38%), Gaps = 30/145 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y A + + T++ VKATD D G G V Y L + AS FN+D T G I
Sbjct: 1179 YSATVPEDAPVNTTVLVVKATDHDEGSNGHVTYSL---GNETASLFNIDSDT---GVITT 1232
Query: 79 EGGLSSTATVN----IRVTD-------------------INDKNPEFQSLPYEFSV-PEG 114
G +R +D +ND P F PY V
Sbjct: 1233 AGVFDREKKARYMFEVRASDSGKYDARWERSVVHVTVVDVNDNRPTFAKYPYVAKVNAHA 1292
Query: 115 QDGLAVGRVHATDADEGQNAVVYYS 139
G V V A DAD+G NA ++YS
Sbjct: 1293 HSGTQVAYVQAADADDGPNADIFYS 1317
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 28/165 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQDEGGLSST 85
+G +++ V ATDKD G + Y + A + F ++ T E GP+ E ++T
Sbjct: 983 VGTSVLTVHATDKDLGASTNLSYSIPQGV--AGNKFTVNARTGVVETAGPLDRED--TAT 1038
Query: 86 ATVNIRVTD----------------INDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDAD 129
+ VTD +ND +P+F+ + VPE + + + A+D D
Sbjct: 1039 YEFAVYVTDGSFHFDTCVVVVSVLDVNDHSPKFRDSCHPLYVPENNELKVIHTLVASDED 1098
Query: 130 EGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQ-QLYL 170
G NA + YS+ + F VD+ TG + +++ LD E Q Q +L
Sbjct: 1099 VGPNADIVYSITDGNAGNKFGVDSRTGRL-SSRPLDREMQSQFHL 1142
Score = 38.9 bits (89), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 76/189 (40%), Gaps = 24/189 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-------------DAASYFN 65
Y R+ + ++ V A+D DSG FG V+YR++ N D F
Sbjct: 23 YNVSLREYDTVSTPVVVVVASDMDSGVFGHVKYRIVSGNARGLFRALRRQWVHDIRELFV 82
Query: 66 LDPATE----HQGPI--QDEGGLS--STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG 117
+ T+ H I +D GGL+ S A V I V + P FQ Y F V E
Sbjct: 83 VGRLTKDTPLHHLTIAAEDGGGLTSQSNAHVYISVLGPQQQPPIFQQARYGFQVREDATA 142
Query: 118 LAV-GRVHATDADEGQNAVVY--YSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
V G V A +D G N + Y YS + F + A G I + LD+E L V
Sbjct: 143 RTVIGTVVAKSSDRGANGLRYSIYSGDPEGYFSIHALMGSITVQRPLDHELHPFLLLNVQ 202
Query: 175 LISKFATSY 183
S SY
Sbjct: 203 ATSGHPPSY 211
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP--E 142
ATV + + D ND P F Y SV EG G V +V A D D G ++Y+ V
Sbjct: 1476 ATVTVDLIDENDNAPRFSQERYVSSVWEGNSKGTFVAQVSALDEDRG-GRLLYHIVEGNH 1534
Query: 143 DIPFVVDAN-TGDIRTNKALDYEKQQLYLERVF 174
D FV++ +G ++TN LD E + YL V
Sbjct: 1535 DNAFVMEPPLSGIVKTNIVLDREIRDSYLLTVI 1567
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 65/149 (43%), Gaps = 20/149 (13%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYF-----------NLDPATEHQGPI---QDEGG-- 81
A D D G+ G V Y L +N D A + +LD + + +GG
Sbjct: 254 ARDADGGRNGAVRYALAEN-PDGAFHVGAKSGSLMLRQSLDYEVRQKYGLVLTATDGGSP 312
Query: 82 -LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYS 139
LSS T+ + V D+ND P F+ Y+ +V E + +V ATD D G NA + +
Sbjct: 313 PLSSNMTLLVEVQDVNDNAPTFERPQYKVNVLESLSANSQFLQVSATDKDTGNNARLTFK 372
Query: 140 VPEDIPFVVDANTGDIRTNKALDYEKQQL 168
+ E P A+ I N Y K+QL
Sbjct: 373 LLEG-PGQQQASKFGIFPNNGFLYLKEQL 400
>gi|345323234|ref|XP_003430691.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1-like
[Ornithorhynchus anatinus]
Length = 859
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 83/180 (46%), Gaps = 28/180 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y R+ ELG ++ V+A+D D+ + YRLL+ A F +DP
Sbjct: 149 YRETVRENLELGYEVLTVRASDGDAPANADLRYRLLEG---AGGAFEIDPRTGVVRTRAA 205
Query: 69 -----ATEHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QD 116
A EH+ ++ D G LS+TATV I V D ND P+F Y VPE
Sbjct: 206 VDREEAAEHRLLVEADDRGRDPGPLSATATVRIAVEDENDNYPQFSEGRYVVRVPEDVAP 265
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
AV RV ATD D G+NA + Y + P F + A TG + LDYE + Y RV
Sbjct: 266 DTAVLRVRATDRDRGRNAALLYGIVSGNPDGRFHLHALTGALDVIHPLDYETVREYTLRV 325
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 24/161 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LDPATEHQGPIQ---D 78
+++V+ATD+D G+ + Y ++ N D + + LD T + ++
Sbjct: 269 VLRVRATDRDRGRNAALLYGIVSGNPDGRFHLHALTGALDVIHPLDYETVREYTLRVKAQ 328
Query: 79 EGG----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQN 133
+GG ++S+ V++RV D+ND P F S P++ SV E G +V V A DAD G+N
Sbjct: 329 DGGRPPLINSSGLVSVRVLDVNDNAPIFVSSPFQASVLENAPPGHSVLHVQAVDADSGEN 388
Query: 134 AVVYYSV-----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A + Y + P P + TG I LD E ++ Y
Sbjct: 389 ARLSYRLVDTGSPPAAPAAIHEGTGWITVRAELDREARERY 429
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 32/136 (23%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP-------------- 75
G +++ V+A D DSG+ + YRL+D + A+ PA H+G
Sbjct: 372 GHSVLHVQAVDADSGENARLSYRLVDTGSPPAA-----PAAIHEGTGWITVRAELDREAR 426
Query: 76 --------IQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
D G LS++A+V++ V D+ND +P F YE + E G +V +
Sbjct: 427 ERYSFGVEAVDHGAPALSASASVSVTVLDVNDNDPAFTQPAYELRLNEDAAVGSSVLTLR 486
Query: 125 ATDADEGQNAVVYYSV 140
A D D N+V+ Y +
Sbjct: 487 ARDRD--ANSVITYQL 500
Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
S+ + + V D ND P F+ Y +V E + G V V A+D D NA + Y +
Sbjct: 125 SAVTYLTVTVGDTNDHRPVFEQAEYRETVRENLELGYEVLTVRASDGDAPANADLRYRLL 184
Query: 142 EDI--PFVVDANTGDIRTNKALDYEK 165
E F +D TG +RT A+D E+
Sbjct: 185 EGAGGAFEIDPRTGVVRTRAAVDREE 210
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 67/160 (41%), Gaps = 38/160 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQ-- 73
+G +++ ++A D+D+ ++ Y+L NT + LD E Q
Sbjct: 478 VGSSVLTLRARDRDANS--VITYQLTGGNTRNRFALSSQSDGGLVTLALPLDYKQERQFV 535
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQ 132
+G S TA V I VTD N P QS Y SV +D+
Sbjct: 536 LAVTASDGTRSRTAQVFINVTDANTHRPRHQSCNYTVSV----------------SDDRH 579
Query: 133 NAVVYYS--VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ +S VPE F +D +GD+R LD+E+++ Y+
Sbjct: 580 DGTFLFSGNVPE--VFQLDLLSGDLRALAELDFERRREYV 617
>gi|410949753|ref|XP_003981582.1| PREDICTED: cadherin-10 [Felis catus]
Length = 773
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 164 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 222
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F V E
Sbjct: 223 PNMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESS 282
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G A+G V ATDAD G+NA V Y + + DI D G I K LDYE ++
Sbjct: 283 PVGTAIGSVKATDADTGKNAEVEYRIIDGDGTDMFDIITEKDTQEGIITVKKPLDYESRR 342
Query: 168 LYLERV 173
LY +V
Sbjct: 343 LYTLKV 348
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|355677298|gb|AER95951.1| cadherin 6, type 2, K-cadherin [Mustela putorius furo]
Length = 512
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 58/102 (56%), Gaps = 8/102 (7%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYY 138
GGLS T TVNI +TD+ND P F Y+F PE G +GR+ A+DAD G+NA + Y
Sbjct: 58 GGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPESSPPGTPIGRIKASDADMGENAEIEY 117
Query: 139 SVPED-----IPFVVDANT--GDIRTNKALDYEKQQLYLERV 173
S+ E V D T G I K LD+EK+++Y +V
Sbjct: 118 SITEGEGLDMFDVVTDQETQEGVITVKKLLDFEKKKVYTLKV 159
>gi|391332942|ref|XP_003740885.1| PREDICTED: protein dachsous-like [Metaseiulus occidentalis]
Length = 3117
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 85/171 (49%), Gaps = 20/171 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NL 66
Y + E+ ++V A D DSG + YRL+D+ ++++ +L
Sbjct: 975 YRISVEESMEVDTEFLRVTAADSDSGNNARLTYRLVDSPAASSTFGIYPNTGYVYLRESL 1034
Query: 67 DPATEHQGPIQ----DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLA 119
D TE IQ D G LS++ TV I V+D ND P+F +EF+V E + G +
Sbjct: 1035 DRETEDSYTIQVEAVDNGNPPLSASTTVFIAVSDANDNEPQFVRDMFEFAVEENAESGRS 1094
Query: 120 VGRVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLY 169
VG + A D D G NA + YS+ +I F ++ TG++ T LD EK+ Y
Sbjct: 1095 VGEIRAIDKDLGDNAAIRYSLLSNIDEFSINPMTGEMHTKNRLDREKRSNY 1145
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 84/164 (51%), Gaps = 25/164 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------EHQGP 75
E G ++++++ATD+D G + Y L D +F +DP + + P
Sbjct: 467 EPGFSVVRIRATDRDEGVNAALRYEL---QNDINGWFKIDPVSGIVTTKSFIDCETNPSP 523
Query: 76 I-----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
+ +D+G LSSTA + + V+D+ND P F Y +VPE + G V +V A+D
Sbjct: 524 VLTVVARDKGSPSLSSTAKLTVTVSDVNDNEPLFDQSYYNVTVPEDARIGACVLKVAASD 583
Query: 128 ADEGQNAVVYYSV-PEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
D G NAVV +++ P P F +DA +G++ LD E++ Y
Sbjct: 584 PDCGVNAVVNFTLGPTSSPSFRIDARSGELCIAAKLDREERSTY 627
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSVPEDI 144
A VNI + D+ND +P F+S SVPE L+ V VHA DAD G+N + YS+ E+
Sbjct: 851 AQVNISILDVNDNSPRFESNFVRMSVPENSSLLSPVYFVHAQDADSGENGRISYSLAEES 910
Query: 145 P-FVVDANTGDIRTNKALDYEKQQLY 169
F V+ +G I ++LDYE +Q +
Sbjct: 911 ENFKVNERSGAIILKRSLDYELRQQH 936
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQ 73
+G + +A D+D G FG + Y +L+ +A F++DP + H
Sbjct: 2663 IGTVIFTARANDRDRGHFGTLNYTILEG--EAREKFSIDPRSGLVSSNIVFDYESKKHHY 2720
Query: 74 GPI--QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADE 130
I D GG ++ V + + ++ PEF Y F+VP G +VGRV ATD D
Sbjct: 2721 FTIAATDAGGKTAHVQVQVDIIGKDEYPPEFLKPVYHFTVPGNAPIGYSVGRVEATDIDS 2780
Query: 131 GQNAVV-YYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
GQ+ VV Y+ + F V++ TG I K + ++ + L
Sbjct: 2781 GQDGVVTYWMHYPNYNFNVNSTTGVIYVVKPMGSNERVIEL 2821
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 74/169 (43%), Gaps = 29/169 (17%)
Query: 27 HELGVTLMQVKATDKDSGKFGLVEYRLLDNN---------------TDAASYFNLDPATE 71
HE+G+ V+A +D + ++Y + N T+ + L+P+
Sbjct: 1305 HEIGI----VEAAYQDKSQPSAIQYSITSGNERNVFSIDRVTGVLYTNVEIDYELNPSFV 1360
Query: 72 HQGPIQDEGGL----SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
Q D G +S TVN+RV D ND P F S P FSV E G + + A
Sbjct: 1361 LQVSASDGSGAPESRASIVTVNVRVEDTNDNPPRFASDPIVFSVSENTSPGSLLNAITAH 1420
Query: 127 DADEGQNAVVYYSVPE-----DIPFVVDANTGDIRTNKALDYEKQQLYL 170
D D G N +V YS+ E F +D +G I + LDYEKQ Y+
Sbjct: 1421 DEDSGLNGLVRYSIIEPNGSGKPTFTIDPVSGVITLIEPLDYEKQAQYI 1469
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 76/176 (43%), Gaps = 37/176 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------------- 70
E G ++ +++A DKD G + Y LL N + F+++P T
Sbjct: 1090 ESGRSVGEIRAIDKDLGDNAAIRYSLLSNIDE----FSINPMTGEMHTKNRLDREKRSNY 1145
Query: 71 EHQGPIQDEGGL--SSTATVNIRVTDINDKNPEF-----QSLPYEFSVPEGQDGLAVGRV 123
E QD+G SS TV +RV D ND P F S P G + VG++
Sbjct: 1146 ECIVEAQDQGAKPKSSRVTVRVRVLDKNDNAPLFADNQETSFVLRRDEPAGSE---VGQI 1202
Query: 124 HATDADEGQNAVVYYSV-----PED-IPFVVDANTGDIRTNKALDYEKQQLYLERV 173
A+DADEG NA V Y + P D + F G I+T L KQ+ Y RV
Sbjct: 1203 RASDADEGTNAEVVYELEATGFPTDGVKFFTINTDGLIKTKTELSQGKQKEYALRV 1258
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 70/162 (43%), Gaps = 34/162 (20%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH----------QGPIQDE-------- 79
A D+D G+F Y ++ NT+ A F L E G + E
Sbjct: 146 ARDRDLGQFNTQFYSIISGNTNNA--FKLSYHRERDEVLYLDLQVNGILDREITPNFSLV 203
Query: 80 -----GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
GG L VNI + D+ND P F Y ++ E G +V RV ATD DE
Sbjct: 204 IEAYDGGTPPLKGVLLVNITIQDVNDNQPIFSQGNYVATIAENATVGTSVLRVLATDTDE 263
Query: 131 GQNAVVYYSV-----PEDIPFVVDANTGDIRTNKALDYEKQQ 167
G+N V YS+ + F +D +G+I NK LD+E ++
Sbjct: 264 GRNGEVRYSINRRQSDREQYFNIDPKSGEIFVNKPLDFETKE 305
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 18/165 (10%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA------------AS 62
D +Y + +G +++V A+D D G +V + L ++ + A+
Sbjct: 558 DQSYYNVTVPEDARIGACVLKVAASDPDCGVNAVVNFTLGPTSSPSFRIDARSGELCIAA 617
Query: 63 YFNLDPATEHQGPI--QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA- 119
+ + + ++ P+ D GGLS+ V + V DIND P F + Y S+ E D
Sbjct: 618 KLDREERSTYEIPVLATDRGGLSTATVVKVHVLDINDHRPVFNPVVYNVSLYEFYDQTVQ 677
Query: 120 -VGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKAL 161
+ V A D DEG N V Y + E F +D ++G I L
Sbjct: 678 PIVVVVAEDRDEGLNGQVSYRIVEGNHQLFRIDPDSGGIHVTSTL 722
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV 140
L ++ + ++D+ND P F Y ++PE + G +V R+ ATD DEG NA + Y +
Sbjct: 433 LKTSKQFTLHISDVNDNAPRFTQSEYFANIPEVAEPGFSVVRIRATDRDEGVNAALRYEL 492
Query: 141 PEDIP--FVVDANTGDIRTNKALDYE 164
DI F +D +G + T +D E
Sbjct: 493 QNDINGWFKIDPVSGIVTTKSFIDCE 518
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
+ATV + V D+ND P+F Y SVPE ++ + R+HA D D G+N + YS+ E
Sbjct: 1697 SATVIVDVLDVNDNVPDFGESCYNLSVPENREWSFIHRLHAADDDLGENGEIVYSIEEGN 1756
Query: 143 -DIPFVVDANTGDIRTNKALDYEKQQLY 169
F + +G++ + KALD E Y
Sbjct: 1757 VGNVFSIAPLSGNL-SCKALDRESASEY 1783
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 58/134 (43%), Gaps = 24/134 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG---- 74
G L + A D+DSG GLV Y +++ N F +DP + E Q
Sbjct: 1411 GSLLNAITAHDEDSGLNGLVRYSIIEPNGSGKPTFTIDPVSGVITLIEPLDYEKQAQYIF 1470
Query: 75 --PIQDEGG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHAT 126
QD+ LSS TV++ V D ND PE S PY VPE Q V + A
Sbjct: 1471 VVEAQDQAREIELRLSSKVTVSLLVEDENDNAPEIVSKPY-VQVPEDKQVDTVVTTILAV 1529
Query: 127 DADEGQNAVVYYSV 140
D D +N + ++V
Sbjct: 1530 DKDSRENGRILFNV 1543
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 80/185 (43%), Gaps = 36/185 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y R+ E+G ++ V A D D G V Y L+ N T+ S F++D T G I
Sbjct: 1822 YSPQVREDAEIGTEVLMVNAHDIDEKNNGEVTYSLI-NATN--SLFSIDSET---GRIYT 1875
Query: 79 EGGL-----------------------SSTATVNIRVTDINDKNPEFQSLPYEFSV-PEG 114
G S +ATV+I +TD ND P F P+ + +
Sbjct: 1876 TGQFDRENEPRYTLEVRASDRGSYETRSHSATVHIAITDANDNKPIFVRYPFFAEIRADA 1935
Query: 115 QDGLAVGRVHATDAD-EGQNAVVYYSVPEDIP----FVVDANTGDIR-TNKALDYEKQQL 168
Q G V V A D D EG+N+ + YS E F ++ +TG++ + +E + L
Sbjct: 1936 QIGTHVEHVVAEDDDEEGRNSDIIYSFSESGVHSDYFHINPHTGEVTLARRVHKFEGKVL 1995
Query: 169 YLERV 173
+LE V
Sbjct: 1996 HLEIV 2000
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 24/135 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G ++++V ATD D G+ G V Y + +D YFN+DP +
Sbjct: 239 YVATIAENATVGTSVLRVLATDTDEGRNGEVRYSINRRQSDREQYFNIDPKSGEIFVNKP 298
Query: 71 -------EHQGPI--QDEG--GLSSTATVNIRVTDINDKNPE----FQSLPYEFSVPE-G 114
H+ + +D G L +T V+I+++DIND P F S + E
Sbjct: 299 LDFETKESHELVVVARDNGLQPLETTTFVSIKISDINDNTPTISLIFLSDDASSRIREDA 358
Query: 115 QDGLAVGRVHATDAD 129
+ G VGR+ +D D
Sbjct: 359 KVGDFVGRISVSDPD 373
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 71/159 (44%), Gaps = 24/159 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNN--TDAASYFNLDP------ATE-HQGP----- 75
G + Q++A+D D G V Y L TD +F ++ TE QG
Sbjct: 1196 GSEVGQIRASDADEGTNAEVVYELEATGFPTDGVKFFTINTDGLIKTKTELSQGKQKEYA 1255
Query: 76 ----IQDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDA 128
+D G S + V+IR+T D NDK F S F+V EG G +G V A
Sbjct: 1256 LRVVAKDLGSPSLESKVDIRITLQDPNDKLLSFYSSTVTFTVKEGVLPGHEIGIVEAAYQ 1315
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYE 164
D+ Q + + YS+ E F +D TG + TN +DYE
Sbjct: 1316 DKSQPSAIQYSITSGNERNVFSIDRVTGVLYTNVEIDYE 1354
Score = 43.1 bits (100), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 75/173 (43%), Gaps = 28/173 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y A + G +++QV A D+D G+ + ++++D N D A F +DP + G I+
Sbjct: 2140 YEASVYEGRRRGESVVQVSAIDED-GEDQRLFFQIIDGNHDNA--FTIDPPS--SGIIKT 2194
Query: 78 -------------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
DE LS T TV I + DIND P F + + +
Sbjct: 2195 NTVLDREIRENYVLIVTASDEMSPPLSGTTTVLITIVDINDNQPVFPASDPVRVREDCKV 2254
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G V V A D D +VY + F VDA TG I +K LD+E Q Y
Sbjct: 2255 GSIVTTVEANDVDTFP-PLVYSLKTGESNFNVDAFTGAITLSKPLDFETQNNY 2306
Score = 42.4 bits (98), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 69/159 (43%), Gaps = 22/159 (13%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTD-----------AASYFNLDPATEHQGPIQDEGGLS- 83
V A D DSG+ G + Y L + + + + + +H+ + E G +
Sbjct: 889 VHAQDADSGENGRISYSLAEESENFKVNERSGAIILKRSLDYELRQQHRLTVIAEDGATP 948
Query: 84 ---STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS 139
+ T+ + V DIND P F+ Y SV E + RV A D+D G NA + Y
Sbjct: 949 ARRNNMTLLVEVQDINDNTPVFEYESYRISVEESMEVDTEFLRVTAADSDSGNNARLTYR 1008
Query: 140 VPEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ D P F + NTG + ++LD E + Y +V
Sbjct: 1009 LV-DSPAASSTFGIYPNTGYVYLRESLDRETEDSYTIQV 1046
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 69/166 (41%), Gaps = 21/166 (12%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVE-------YRLLDNNTDAASYFNLDPATEHQ 73
A+ +D E G L V+ D G F L E R LD N + N+
Sbjct: 1528 AVDKDSRENGRILFNVQGGDT-FGNFRLNETTGELILVRPLDLNQASEIVLNI------- 1579
Query: 74 GPIQDEGGLS--STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
++D G + + I+V D +D P F YE S+ EG G RV ++
Sbjct: 1580 -TVRDNGQPMHFTHQKLQIKVRDSSDIAPLFLQKVYETSISEGAAVGTVFLRVAVPNSTA 1638
Query: 131 GQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
+ + Y E PF +DA TG++RT + LD E+ Y VF
Sbjct: 1639 SAHNISYTLQHEATTTPFAIDATTGELRTTRPLDRERVDRYNLTVF 1684
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+S V I+V D ND P F Y S+PE G + A D D G + Y++
Sbjct: 2628 LASLVGVTIKVKDENDNPPVFPVTRYNESIPEASPIGTVIFTARANDRDRGHFGTLNYTI 2687
Query: 141 PE---DIPFVVDANTGDIRTNKALDYEKQQ 167
E F +D +G + +N DYE ++
Sbjct: 2688 LEGEAREKFSIDPRSGLVSSNIVFDYESKK 2717
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 68/158 (43%), Gaps = 23/158 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------------ATEHQGPI-- 76
+ ++ A D D G+ G + Y + + N + F++ P A+E+ +
Sbjct: 1732 IHRLHAADDDLGENGEIVYSIEEGN--VGNVFSIAPLSGNLSCKALDRESASEYSLVVLA 1789
Query: 77 QDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQN 133
QD G + +T D ND +P+F+ Y V E + G V V+A D DE N
Sbjct: 1790 QDRGAPPKIGRCRLWITVMDQNDNDPQFEHSEYSPQVREDAEIGTEVLMVNAHDIDEKNN 1849
Query: 134 AVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V YS+ + F +D+ TG I T D E + Y
Sbjct: 1850 GEVTYSLINATNSLFSIDSETGRIYTTGQFDRENEPRY 1887
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
+G ++ T+ I V D+ND+ P F S Y V G + V ATDAD G N V Y
Sbjct: 2314 DGAHTAETTLTIDVLDVNDRTPIFSSTSYSV-VLNGHQATKLLTVAATDADSGDNGRVKY 2372
Query: 139 SV 140
S+
Sbjct: 2373 SL 2374
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A + + + + ND P F YE SV EG + G +V +V A D D G++ +++ + +
Sbjct: 2119 ARLEVNLRNENDNAPRFSQSSYEASVYEGRRRGESVVQVSAIDED-GEDQRLFFQIIDGN 2177
Query: 143 -DIPFVVD-ANTGDIRTNKALDYEKQQLYL 170
D F +D ++G I+TN LD E ++ Y+
Sbjct: 2178 HDNAFTIDPPSSGIIKTNTVLDREIRENYV 2207
>gi|345308127|ref|XP_001507828.2| PREDICTED: cadherin-18-like [Ornithorhynchus anatinus]
Length = 796
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 82/176 (46%), Gaps = 37/176 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
E+G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 EMGTSVLQVTATDADDPTYGNSARVVYSILQGQ----PYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLYL 170
++ A DAD G NA + Y++ I + G + K L+YEK++ Y+
Sbjct: 289 KIKANDADTGSNADMKYTIINGDGAGIFSISTDKETREGILSLKKPLNYEKKKSYI 344
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE + G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMAEMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 71/178 (39%), Gaps = 49/178 (27%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF----------------------- 64
++G + ++KA D D+G ++Y ++ N D A F
Sbjct: 282 QVGSAVGKIKANDADTGSNADMKYTII--NGDGAGIFSISTDKETREGILSLKKPLNYEK 339
Query: 65 -------------NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
+LD H GP +D + I V D+ D+ P F Y V
Sbjct: 340 KKSYILNIEGANTHLDFRFSHLGPFKD------VTMLKIIVGDV-DEPPLFTKPSYIMEV 392
Query: 112 PE-GQDGLAVGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEK 165
E + G VG V A D D + V Y+ + ED F +DANTG IRT K LD E+
Sbjct: 393 YENAKIGTVVGTVTAHDPDSANSLVRYFIDHNPKEDRYFSIDANTGTIRTTKVLDREE 450
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 56/131 (42%), Gaps = 23/131 (17%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPI- 76
++G + V A D DS LV Y +D+N YF++D T + P
Sbjct: 397 KIGTVVGTVTAHDPDSAN-SLVRY-FIDHNPKEDRYFSIDANTGTIRTTKVLDREETPWH 454
Query: 77 --------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
+D GL S V IRV D+ND PE ++ Y+ V E + G + + A D
Sbjct: 455 NITVAASEKDNLGLLSHVAVGIRVLDVNDNPPEL-AMEYDVVVCENSKPGQVIHTISAVD 513
Query: 128 ADEGQNAVVYY 138
D+ N ++
Sbjct: 514 KDDFANGPRFH 524
Score = 36.2 bits (82), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|149026446|gb|EDL82596.1| cadherin 10, isoform CRA_a [Rattus norvegicus]
Length = 486
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 145 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 203
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F V E
Sbjct: 204 PNMNRENKEQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESS 263
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G AVG V ATDAD G+NA V Y + + DI D G I K LDYE ++
Sbjct: 264 PVGTAVGSVKATDADTGKNAEVDYRIIDGDGTDMFDIITEKDTQEGIITVKKPLDYENRR 323
Query: 168 LYLERV 173
LY +V
Sbjct: 324 LYTLKV 329
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 129 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 188
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 189 YFSVEPETGIIRT 201
>gi|195388388|ref|XP_002052862.1| GJ19658 [Drosophila virilis]
gi|194149319|gb|EDW65017.1| GJ19658 [Drosophila virilis]
Length = 3639
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 86/194 (44%), Gaps = 48/194 (24%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS---------------- 62
Y + + ++QV A+D D+G + YR++D TD AS
Sbjct: 1074 YAVNVSESRAINAQIIQVNASDLDTGNNARITYRIVDAGTDNASQSLASVGGGGSDADLA 1133
Query: 63 -YFNLDP------------------------ATEHQGPIQDEGGLSSTATVNIRVTDIND 97
+F + P AT++ P + A V +RV D ND
Sbjct: 1134 QHFGIFPNSGWIYLRAALDRESRDRYELTVLATDNGTP-----AAHARARVLVRVLDAND 1188
Query: 98 KNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYS-VPEDIPFVVDANTGDI 155
+P+FQ YEF + E + G VG V A+DAD G+NA + YS +P + F V TG+I
Sbjct: 1189 NDPKFQRESYEFRIEENLRRGAVVGVVSASDADLGENAAIRYSLLPANSSFQVHPVTGEI 1248
Query: 156 RTNKALDYEKQQLY 169
T + LD E ++LY
Sbjct: 1249 STREPLDREMRELY 1262
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 80/175 (45%), Gaps = 24/175 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + + G +++QV A D+D G + Y L D A +F +D T
Sbjct: 531 YHANVMEVADPGTSVLQVLARDRDEGTNAALSYALADTPDTHAQWFQIDAQTGLITTRSH 590
Query: 71 --------EHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
I +GG LSSTATV + + D+ND P F Y SV E + G
Sbjct: 591 IDCETEPVPQLTIIARDGGQPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGR 650
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
+ +V A+D D G NA+V Y++ E F V + +G+I LDYE++ Y
Sbjct: 651 CILKVSASDPDCGVNAMVNYTLGEGFKHLTEFEVRSASGEICIAGELDYERRNSY 705
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 79/168 (47%), Gaps = 33/168 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI---------- 76
G + V A+D D G+ + Y LL N S F + P T + P+
Sbjct: 1209 GAVVGVVSASDADLGENAAIRYSLLPAN----SSFQVHPVTGEISTREPLDREMRELYDL 1264
Query: 77 ----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYE--FSVPEGQD-GLAVGRVHATD 127
+D+G S+ A V + VTD+ND PE P E SV E Q G V R+ A D
Sbjct: 1265 MVEARDQGTPTRSARAPVRVHVTDVNDNAPEIAD-PQEDVVSVREEQPPGTEVVRIRAID 1323
Query: 128 ADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
D GQNA + YS+ + F +DANTG IRT LD+E++ +Y
Sbjct: 1324 RDHGQNASINYSLLKGRDSDGHGLFSIDANTGLIRTRVMLDHEERSIY 1371
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L TVNI + D+ND P F Y +VPE G +V +V+A+D D +N +V Y++
Sbjct: 288 LRGLMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAI 347
Query: 141 -----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ F +DA TG + NK LD+E ++L+
Sbjct: 348 NRRQSDKEQMFRIDARTGAVYINKPLDFETKELH 381
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 35/173 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------EHQGPIQDEG 80
G + V AT D+ + V Y + + D YF+++P + +H+ Q
Sbjct: 865 GTVVGSVIATSSDTAQRSPVRYSIYSGDPDG--YFSIEPTSGNIRIAHPLDHEAKAQVLL 922
Query: 81 GLSSTA---------TVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
+ +T+ VNI V D+ND PEF++ SVPE + G + HA D D
Sbjct: 923 NIQATSGEPPVYGHTQVNIEVEDVNDNAPEFETSMVRISVPENAELGAPLFAAHAHDKDS 982
Query: 131 GQNAVVYYSVPEDIP--------------FVVDANTGDIRTNKALDYEKQQLY 169
G + V YS+ + F +DA +G + ++ LDYE Q +
Sbjct: 983 GSSGQVTYSLKGNATQQHVKALAAGSAPLFAIDARSGHLVLSRHLDYETAQRH 1035
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L ++ ++ +RVTD+ND PEF+ Y +V E D G +V +V A D DEG NA + Y++
Sbjct: 506 LHASKSIFLRVTDVNDNAPEFEQDVYHANVMEVADPGTSVLQVLARDRDEGTNAALSYAL 565
Query: 141 PEDIP------FVVDANTGDIRTNKALDYEKQ 166
D P F +DA TG I T +D E +
Sbjct: 566 -ADTPDTHAQWFQIDAQTGLITTRSHIDCETE 596
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 71/160 (44%), Gaps = 27/160 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLL--DNNTDAASY--FNLDPAT-------------- 70
LG ++ + +A+D D G FG + Y L+ D+ D +S+ F +D T
Sbjct: 2930 LGSSVFRGQASDLDRGAFGQLNYSLVPADDVDDDSSWRLFRVDAVTGIVSSAAVFDYEQR 2989
Query: 71 ---EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD---GLAVGRVH 124
Q D GG S+ V I + ++ P+F Y F +P G VG+V
Sbjct: 2990 QRYHLQLRASDMGGRSARVAVRIEIESRDEFTPQFTERTYRFVLPASAALPLGFVVGQVT 3049
Query: 125 ATDADEGQNAVVYY--SVPEDIPFVVDANTGDIRTNKALD 162
ATDAD G + V Y S P F V+ ++G + + LD
Sbjct: 3050 ATDADSGADGRVVYQLSAPHS-HFKVNRSSGAVLIKRKLD 3088
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 86 ATVNIRVTDINDKNPEFQ-SLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
AT+ I + D+ND PEF+ Y SVPE + + V A+D DEG NA + YS+
Sbjct: 1874 ATLIITIGDVNDNAPEFRPGACYGLSVPENSESSVIHTVVASDLDEGANAEIVYSIIGGN 1933
Query: 143 -DIPFVVDANTGDIRTNKALDYEKQQLY 169
F +DA TG++ + ++LD E+ Y
Sbjct: 1934 LGNKFNIDARTGEL-SARSLDREQHARY 1960
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 69/166 (41%), Gaps = 25/166 (15%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY--------------RLLDNNTDA 60
D FY + +G +++V A+D D G +V Y R
Sbjct: 634 DQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTLGEGFKHLTEFEVRSASGEICI 693
Query: 61 ASYFNLDPATEHQGPI--QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE----- 113
A + + ++ P+ D GGLS+TA + +++TD+ND P F Y S+ E
Sbjct: 694 AGELDYERRNSYEFPVLATDRGGLSTTAMIKLQLTDVNDNRPVFYPREYNVSLRESGPAQ 753
Query: 114 -GQDGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
G + + V ATD D G V Y + E F +D +G+I
Sbjct: 754 AGGTPMPIVAVVATDPDAGSFGQVSYRIVAGNEAGIFRIDRASGEI 799
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
LSS A + + + D ND +P+F + + EG G V +V A DADEG NA + Y +
Sbjct: 2353 LSSYAELVVELEDENDNSPQFSQRQFVATAWEGNSKGTFVAQVQAFDADEGANARLRYHI 2412
Query: 141 PE---DIPFVVD-ANTGDIRTNKALDYEKQQLYLERVF 174
+ D FV++ A +G +RTN LD E + +Y ++
Sbjct: 2413 VDGNHDNAFVIEPAFSGIVRTNIVLDREIRDVYSLKII 2450
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 8/129 (6%)
Query: 44 GKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQ 103
+ G + R LD A L A++ PI +G +++ V D ND P F+
Sbjct: 1942 ARTGELSARSLDREQHARYTLQLQ-ASDRGQPITQQG----HCNISVFVEDQNDNEPRFE 1996
Query: 104 SLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKA 160
Y SVPE G +V + A+DAD G N+ + YS+ + F +D+ +G I T
Sbjct: 1997 LSKYMASVPEDAAIGSSVLSIKASDADLGVNSRLVYSLANETQWQFAIDSKSGLITTVGK 2056
Query: 161 LDYEKQQLY 169
LD E Q Y
Sbjct: 2057 LDRELQSSY 2065
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 45/104 (43%), Gaps = 19/104 (18%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRV----HATDADEGQNAVVYY 138
SS TV I V D+ND P + P E V E L VG + ATDAD G N + Y
Sbjct: 1509 SSAITVKIEVADVNDNAPRWPKDPIELEVSE---SLPVGAILHNFTATDADSGTNGELQY 1565
Query: 139 SVPEDIP------------FVVDANTGDIRTNKALDYEKQQLYL 170
+ P F +D+ TG + LD+E Q YL
Sbjct: 1566 RLLRYTPQLNESLEQISPLFALDSLTGSLSLQAPLDFESLQEYL 1609
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 74/190 (38%), Gaps = 53/190 (27%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y A + +G +++ +KA+D D G V RL+ ++L T+ Q I
Sbjct: 2000 YMASVPEDAAIGSSVLSIKASDADLG----VNSRLV---------YSLANETQWQFAIDS 2046
Query: 79 EGGL------------------------------SSTATVNIRVTDINDKNPEFQSLPYE 108
+ GL S + V I V DIND P F+ PY
Sbjct: 2047 KSGLITTVGKLDRELQSSYSFMVLATDCGRYEVRSGSVAVQINVLDINDNKPIFERYPYS 2106
Query: 109 FSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPED---------IPFVVDANTGDIRTN 158
V Q G + +V A DAD+G N + Y++ D F ++ NTG +
Sbjct: 2107 GQVAALIQPGQTLLKVQAHDADQGANGELLYALKADSTLTTPAMRSKFRINPNTGALSAT 2166
Query: 159 KALDYEKQQL 168
++L E +L
Sbjct: 2167 QSLASETGRL 2176
Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 19/101 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------- 71
Y A + +G +++QV A+D D+ + GLVEY + +D F +D T
Sbjct: 313 YFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDARTGAVYINKP 372
Query: 72 --------HQGPI--QDEGG--LSSTATVNIRVTDINDKNP 100
H+ + +D G L +TA V+IRVTD+ND P
Sbjct: 373 LDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQP 413
Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 42/184 (22%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
+ A A + + G + QV+A D D G + Y ++D N D A F ++PA G ++
Sbjct: 2378 FVATAWEGNSKGTFVAQVQAFDADEGANARLRYHIVDGNHDNA--FVIEPA--FSGIVRT 2433
Query: 78 -------------------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYE-FSVPEGQ 115
DEG ++ T+T+ + + D+ND P F P SV E
Sbjct: 2434 NIVLDREIRDVYSLKIIATDEGVPQMTGTSTIRVHIVDVNDNQPTFP--PNNVVSVSEAT 2491
Query: 116 D-GLAVGRVHATDADE--------GQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
+ G + + A D D G ++ V E++ F +D +G + + LDYE+
Sbjct: 2492 ELGAVIASLSANDVDTYPTLTYRLGSDSAVEM---ENLSLFGLDRYSGKLVLKRRLDYEQ 2548
Query: 166 QQLY 169
QQ Y
Sbjct: 2549 QQEY 2552
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 63/156 (40%), Gaps = 33/156 (21%)
Query: 18 FYGAMAR----DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD---------AASYF 64
F +M R + ELG L A DKDSG G V Y L N T +A F
Sbjct: 953 FETSMVRISVPENAELGAPLFAAHAHDKDSGSSGQVTYSLKGNATQQHVKALAAGSAPLF 1012
Query: 65 NLDPATEHQG-----------------PIQDEG--GLSSTATVNIRVTDINDKNPEFQSL 105
+D + H D G LS+ ++ + V D+ND P F+
Sbjct: 1013 AIDARSGHLVLSRHLDYETAQRHSLIVTATDAGLPPLSADLSILVDVQDVNDNPPVFERD 1072
Query: 106 PYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
Y +V E + + +V+A+D D G NA + Y +
Sbjct: 1073 EYAVNVSESRAINAQIIQVNASDLDTGNNARITYRI 1108
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 75/201 (37%), Gaps = 53/201 (26%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLL-------DNNTDAASYFNLDPAT---EHQGPIQD 78
+G L ATD DSG G ++YRLL ++ + F LD T Q P+
Sbjct: 1543 VGAILHNFTATDADSGTNGELQYRLLRYTPQLNESLEQISPLFALDSLTGSLSLQAPLDF 1602
Query: 79 EG-------------------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
E L ++ TV +R+ D ND P +F VP G A
Sbjct: 1603 ESLQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDNAP-------QFVVPSRSAGGA 1655
Query: 120 --------------VGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALD 162
V + A D+D G+N + Y + + F + +G I K L
Sbjct: 1656 ATVYVSDATRIGELVTHIVAVDSDAGENGRISYDIVSGNGEGRFRIKPQSGIIELAKTLP 1715
Query: 163 YEKQQLYLERVFLISKFATSY 183
+QL F+++ A+ +
Sbjct: 1716 PASEQLDKTGRFMLTIRASDH 1736
>gi|26330025|dbj|BAC28751.1| unnamed protein product [Mus musculus]
Length = 575
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 75/164 (45%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y L+ D+ F +DP + EH+
Sbjct: 353 GSKIMQLTAMDADEGANALVTYALISGADDS---FRIDPESGDLIATKRLDREHRSKYSL 409
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G SS +NI ++D+ND P F Y F +PE G V + ATD D G
Sbjct: 410 LVRADDGLQSSDMRINITISDVNDHTPRFSRPVYSFDIPEDTTPGSLVAAILATDDDSGV 469
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG +ALDYE QQ Y+ V
Sbjct: 470 NGEISYVVEEDDGDGVFFLNLVTGVFNLTRALDYETQQYYILTV 513
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 321 AEVEITLQDINDNPPVFPTDTLDLTVEENIGDGSKIMQLTAMDADEGANALVTYALISGA 380
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ K LD E + Y
Sbjct: 381 DDSFRIDPESGDLIATKRLDREHRSKY 407
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N V Y + +
Sbjct: 112 VTILVTDLNDNVPMFISQNALAADPSAMIGSVLTTIMAADPDEGANGEVEYEILNGDTDT 171
Query: 146 FVVDANTGDIRTNKAL 161
F VD +GD+R AL
Sbjct: 172 FTVDRYSGDLRVASAL 187
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 16/120 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY-------FNLDPATEHQGP------- 75
G + + ATD DSG G + Y + +++ D + FNL A +++
Sbjct: 454 GSLVAAILATDDDSGVNGEISYVVEEDDGDGVFFLNLVTGVFNLTRALDYETQQYYILTV 513
Query: 76 -IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
+D GG S+T + D+ND P F Y S+ E G V + TDAD+G +
Sbjct: 514 RAEDGGGQSTTIRAYFNILDVNDNPPVFSMSSYSTSLMENLPLGSTVLVFNVTDADDGMS 573
>gi|148703181|gb|EDL35128.1| mCG142340, isoform CRA_a [Mus musculus]
Length = 650
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 75/164 (45%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y L+ D+ F +DP + EH+
Sbjct: 428 GSKIMQLTAMDADEGANALVTYALISGADDS---FRIDPESGDLIATKRLDREHRSKYSL 484
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G SS +NI ++D+ND P F Y F +PE G V + ATD D G
Sbjct: 485 LVRADDGLQSSDMRINITISDVNDHTPRFSRPVYSFDIPEDTTPGSLVAAILATDDDSGV 544
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG +ALDYE QQ Y+ V
Sbjct: 545 NGEISYVVEEDDGDGIFFLNLVTGVFNLTRALDYETQQYYILTV 588
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 396 AEVEITLQDINDNPPVFPTDTLDLTVEENIGDGSKIMQLTAMDADEGANALVTYALISGA 455
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ K LD E + Y
Sbjct: 456 DDSFRIDPESGDLIATKRLDREHRSKY 482
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N V Y + +
Sbjct: 187 VTILVTDLNDNVPMFISQNALAADPSAMIGSVLTTIMAADPDEGANGEVEYEILNGDTDT 246
Query: 146 FVVDANTGDIRTNKAL 161
F VD +GD+R AL
Sbjct: 247 FTVDRYSGDLRVASAL 262
Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 69/166 (41%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG + Y + +N F++ P T E Q
Sbjct: 1 RIGELVSSVTATDSDSGVNADLHYTITGSNNHGT--FSISPNTGSIFLAKKLDFETQSLY 58
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G SST +V I+V D ND P F S+ E G +V V A D
Sbjct: 59 KLNITAKDQGRPPRSSTMSVVIQVRDFNDNPPSFPPGDIFKSIVENIPLGTSVISVTAHD 118
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + Y++ + +P F +D G I TN +D E L+
Sbjct: 119 PDADINGQLSYAIIQQMPRGNHFSIDEVKGTIYTNAEIDREFANLF 164
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 16/120 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY-------FNLDPATEHQGP------- 75
G + + ATD DSG G + Y + +++ D + FNL A +++
Sbjct: 529 GSLVAAILATDDDSGVNGEISYVVEEDDGDGIFFLNLVTGVFNLTRALDYETQQYYILTV 588
Query: 76 -IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
+D GG S+T + D+ND P F Y S+ E G V + TDAD+G +
Sbjct: 589 RAEDGGGQSTTIRAYFNILDVNDNPPVFSMSSYSTSLMENLPLGSTVLVFNVTDADDGMS 648
>gi|148676980|gb|EDL08927.1| mCG123390, isoform CRA_a [Mus musculus]
Length = 769
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 145 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 203
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F V E
Sbjct: 204 PNMNRENKEQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESS 263
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G AVG V ATDAD G+NA V Y + + DI D G I K LDYE ++
Sbjct: 264 PVGTAVGSVKATDADTGKNAEVDYRIIDGDGTDMFDIITEKDTQEGIITVKKPLDYENRR 323
Query: 168 LYLERV 173
LY +V
Sbjct: 324 LYTLKV 329
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 129 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 188
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 189 YFSVEPETGIIRT 201
>gi|338718927|ref|XP_001917231.2| PREDICTED: cadherin-10 [Equus caballus]
Length = 789
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 164 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 222
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F V E
Sbjct: 223 PNMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESS 282
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G A+G V ATDAD G+NA V Y + + DI D G I K LDYE ++
Sbjct: 283 PVGTAIGSVKATDADTGKNAEVEYRIIDGDGTDMFDIITDKDTQEGIITVKKPLDYESRR 342
Query: 168 LYLERV 173
LY +V
Sbjct: 343 LYTLKV 348
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|442768496|gb|AGC70195.1| protocadherin-like protein, partial [Stylophora pistillata]
Length = 2608
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 83/165 (50%), Gaps = 19/165 (11%)
Query: 25 DKHE-LGVTLMQVKATDKDSGKFGLVEYR--------LLDNNTDAASYFNLDPATEHQGP 75
D+H G ++ V ATD D+G L+ Y + ++ + E Q
Sbjct: 972 DEHTPAGTNILNVSATDADTGNNALISYSFQSGVDTSMFGLRSNGWLFITRQLDREQQEV 1031
Query: 76 IQ------DEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
+ D+G + SSTA V + + DIND NP+F Y FSV E Q + VG+V A+
Sbjct: 1032 YRFTVVATDKGHIPKSSTADVIVYIDDINDHNPKFTQQAYIFSVNENQPNRTFVGQVPAS 1091
Query: 127 DADEGQNAVVYYSV-PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D D G NA + Y+ P + F +D NTG IRTN+ L+ E++ Y+
Sbjct: 1092 DKDAGANAKISYTFEPPSLEFAIDHNTGIIRTNQVLNREQRSSYI 1136
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 83/178 (46%), Gaps = 25/178 (14%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRL--LDNNTDAASYFNLDPAT-------- 70
A+ + +G +++ ATDKD G + Y + T ++F +D AT
Sbjct: 444 AVVSENATIGTSVVVAHATDKDIGSNAKLVYNISYTSQATLYKTWFQIDQATGEIRTSAR 503
Query: 71 ---------EHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGL 118
E + D G LS+ TV + +TD ND +P F Y +V E +
Sbjct: 504 LDREKFARLEFLVTVTDSGVPALSANCTVIVNITDANDNDPIFTKAVYFSTVNENSANNT 563
Query: 119 AVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
+V +V A D D G N +V+YS+ +PF +D NTG + T+ +D+E Q LY+ V
Sbjct: 564 SVLQVLANDIDSGINGIVHYSLATQHRRVPFSIDPNTGLLSTSGQIDFEAQSLYVINV 621
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 80/168 (47%), Gaps = 33/168 (19%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------EHQGPIQ- 77
++G V A D DSG FG V Y L N + F ++ +T + +GP Q
Sbjct: 872 KIGEVFYNVTAQDPDSGLFGRVRYTFLSNPNNT---FQMNSSTGALTVTHLIDFEGPRQY 928
Query: 78 ------DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
++GG L+STAT + V D+ND P+F + Y V E G + V ATD
Sbjct: 929 LIIVLAEDGGSPPLNSTATFRVTVVDVNDHTPKFSNKSYSTHVDEHTPAGTNILNVSATD 988
Query: 128 ADEGQNAVVYYSVPEDIPFVVDANTGDIRTN------KALDYEKQQLY 169
AD G NA++ YS VD + +R+N + LD E+Q++Y
Sbjct: 989 ADTGNNALISYSFQSG----VDTSMFGLRSNGWLFITRQLDREQQEVY 1032
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 78/156 (50%), Gaps = 21/156 (13%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LDPATE--HQGPIQ--DEG 80
V A D DSG + + + N D + N LD T+ HQ +Q D G
Sbjct: 671 VMAKDNDSGILSQINFAFSNGNDDGLFFINSSTGVITLIKPLDRETKDFHQLEVQATDGG 730
Query: 81 GLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY 137
GL S +A + + V D+ND+ P F+ Y+F++ E D +G V+A+ D G NA +Y
Sbjct: 731 GLKSKNSAVIQVTVLDVNDEPPVFEPSSYKFAIDENSDVNTLLGSVYASSKDLGTNAQIY 790
Query: 138 YSVPE-DIPFVVDAN-TGDIRTNKALDYEKQ-QLYL 170
YS+ + +I V N TG I T +D+E+ QL L
Sbjct: 791 YSISDGNIHNVFTINSTGTIFTQNNIDHERSPQLLL 826
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 30/169 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLDPATEHQGPIQDEGGLSSTAT---- 87
++ + A D D G V+YR+ D N D+ F L+ AT G ++ G L T
Sbjct: 1504 VITITAIDNDLGSNAKVKYRIEHDENRDSFRKFALNAAT---GLLKLVGNLDHETTPKYV 1560
Query: 88 VNIRVTD------------------INDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+NI VTD +ND PEF + +V E Q G V V A D
Sbjct: 1561 LNISVTDGGTPPQFSFQLLTVFVVDVNDNGPEFNQSLFLGNVSENQPVGTPVMAVSAYDL 1620
Query: 129 DEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
D G+N + YS+P + F ++ ++G I TN LD E++ Y V+
Sbjct: 1621 DSGENGALTYSIPRGNVNQKFALNGSSGVIYTNSTLDREEKDEYTLTVY 1669
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 75/184 (40%), Gaps = 37/184 (20%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY + +G +++ V+A+D D+G G++ Y N F +D T
Sbjct: 1173 FYEKAVPEDIPVGSSVLTVEASDPDAGSNGMITYFFASN----PGVFTIDARTGVITTTA 1228
Query: 71 -----------------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
+H P Q S V I V D+ND +P F + ++PE
Sbjct: 1229 RLDREKHDRYTLSIGAKDHGNPNQ-----SHVVFVTIHVLDVNDNSPRFVNNSIFVNIPE 1283
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
Q G V V A D D G N V Y++ + F ++ +G I K LD+EK+ Y
Sbjct: 1284 KQAIGTVVTTVTAKDEDTGNNGKVRYTIDQGNGGKVFEINETSGVIALRKPLDFEKKSKY 1343
Query: 170 LERV 173
R+
Sbjct: 1344 QLRI 1347
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 68/158 (43%), Gaps = 29/158 (18%)
Query: 35 QVKATDKDSGKFGLVEYRL--------LDNNT------------DAASYFNLDPATEH-Q 73
QV A+DKD+G + Y +D+NT +SY A +H
Sbjct: 1087 QVPASDKDAGANAKISYTFEPPSLEFAIDHNTGIIRTNQVLNREQRSSYILTVKANDHGT 1146
Query: 74 GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
P D +V + V DIND P F+ YE +VPE G +V V A+D D G
Sbjct: 1147 SPRTDH------TSVTVTVQDINDNAPTFKKPFYEKAVPEDIPVGSSVLTVEASDPDAGS 1200
Query: 133 NAVV-YYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
N ++ Y+ F +DA TG I T LD EK Y
Sbjct: 1201 NGMITYFFASNPGVFTIDARTGVITTTARLDREKHDRY 1238
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 72/174 (41%), Gaps = 21/174 (12%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
SLF G ++ ++ +G +M V A D DSG+ G + Y + N + N +
Sbjct: 1596 SLFLGNVSENQ-PVGTPVMAVSAYDLDSGENGALTYSIPRGNVNQKFALNGSSGVIYTNS 1654
Query: 76 I-----QDEGGLS------------STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
+DE L+ T TV I+V D+ND P F +V E +
Sbjct: 1655 TLDREEKDEYTLTVYAMDNVYPRRVGTCTVKIKVLDVNDHRPVFIPSRLNLTVLEHRPPF 1714
Query: 119 AVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ A D D GQN + Y + ED F V TG + T LD E++ Y
Sbjct: 1715 DFHTLRAQDPDIGQNGRIRYIIQHGNEDAKFSVGEFTGVLSTTAELDRERKSRY 1768
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 69/167 (41%), Gaps = 22/167 (13%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATE 71
+K +G + V A D+D+G G V Y + N N + ++
Sbjct: 1283 EKQAIGTVVTTVTAKDEDTGNNGKVRYTIDQGNGGKVFEINETSGVIALRKPLDFEKKSK 1342
Query: 72 HQGPI----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
+Q I Q + SS V + V D ND P F+ P + EG V + A
Sbjct: 1343 YQLRIVARDQGQNSQSSFLYVTVYVLDSNDNRPTFEMNPVTVQLQEGVPLNTNVTTIKAH 1402
Query: 127 DADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D D GQN+ + YS+ P F VD +TG ++T ++D E Y
Sbjct: 1403 DYDSGQNSWIRYSIDSQSPGPAKFKVDPSTGVVQTIGSIDREAVDEY 1449
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 74/171 (43%), Gaps = 31/171 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQDEG----- 80
L + +KA D DSG+ + Y + D+ + + F +DP+T + G I E
Sbjct: 1392 LNTNVTTIKAHDYDSGQNSWIRYSI-DSQSPGPAKFKVDPSTGVVQTIGSIDREAVDEYT 1450
Query: 81 --------------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHA 125
LSST T+ I V+D+ND P F S P E V E + V + A
Sbjct: 1451 LNIRATDQAFTESERLSSTLTIFIIVSDVNDNKPIFVS-PNETYVMEDEGFDYPVITITA 1509
Query: 126 TDADEGQNAVVYYSVPED------IPFVVDANTGDIRTNKALDYEKQQLYL 170
D D G NA V Y + D F ++A TG ++ LD+E Y+
Sbjct: 1510 IDNDLGSNAKVKYRIEHDENRDSFRKFALNAATGLLKLVGNLDHETTPKYV 1560
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 10/89 (11%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVG----RVHATDADEGQNAVVYY 138
S VNI ++D+ND P F P E+ V E + +++G RV+ATD D G N + +
Sbjct: 2509 SVVVEVNITISDVNDNPPVFD--PSEY-VKEVYENISIGTTLLRVNATDKDSGANGRLVF 2565
Query: 139 SV---PEDIPFVVDANTGDIRTNKALDYE 164
S+ + F +++ TG+I T K LD+E
Sbjct: 2566 SILSGNDKQSFRINSRTGEIVTIKRLDHE 2594
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 30/177 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y R+ ++G +++ +A D DSGK G + + L ++DA F +D T +Q
Sbjct: 1807 YSVNIRELTKIGTPILRAQANDIDSGKNGEITFSL---SSDALGIFRIDSKTGTIYTLQE 1863
Query: 78 ----------------DEGGLSSTATVNIRVTDINDKN--PEFQSLPYEFSVPEG----Q 115
D+G +V + V+ I++ N P F ++PYE ++ G Q
Sbjct: 1864 FDYYITAAYNFLCRATDKGVAPRETSVGVTVSIIDENNHAPVFDAIPYEATIVSGSSVPQ 1923
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYL 170
+ L RVHA D D + Y + F +++N+G +R + + ++Y+
Sbjct: 1924 NELV--RVHAEDKDSKSITHMTYRLDNSSQPFFQLESNSGVMRVKQGVSSIPDKVYV 1978
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 67/174 (38%), Gaps = 34/174 (19%)
Query: 35 QVKATDKDSGKFGLVEYRLLDNNTD--------------AASYFNLDPATEHQGPIQDEG 80
+V A D D G + + Y ++ NTD + L P + +D
Sbjct: 122 RVTAVDDDLGSYAVQNYSIISGNTDNMFALTEYVDAVGRLGAKIELQPGKQLDREQRDLY 181
Query: 81 GLSSTAT------------VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATD 127
L+ +A+ VNI V D+ND +P F Y +V E + V+ATD
Sbjct: 182 SLTVSASDGGTPPQTGFGLVNITVLDVNDNDPVFNPKYYNPNVTENTKQFTPIVEVYATD 241
Query: 128 ADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKA-LDYEKQQLYLERVF 174
D G V YSV D F + N I N A LD EKQ Y RV
Sbjct: 242 KDIGTYGKVMYSVIHDSTSDPDGHFALRTNEKGIIVNLAKLDREKQDSYSLRVL 295
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 67/159 (42%), Gaps = 23/159 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI------------ 76
+++QV A D DSG G+V Y L + F++DP T G I
Sbjct: 564 SVLQVLANDIDSGINGIVHYSLATQHRRVP--FSIDPNTGLLSTSGQIDFEAQSLYVINV 621
Query: 77 --QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG-- 131
D GG + +NI V D ND P + Y+ SV E V V A D D G
Sbjct: 622 VASDGGGRLDKSILNISVVDENDNYPVINPIIYDVSVYENLTIDDVVATVMAKDNDSGIL 681
Query: 132 -QNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Q + + +D F ++++TG I K LD E + +
Sbjct: 682 SQINFAFSNGNDDGLFFINSSTGVITLIKPLDRETKDFH 720
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 30/181 (16%)
Query: 3 PCPIPSALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-- 60
P IPS L +T +H ++A D D G+ G + Y + N DA
Sbjct: 1696 PVFIPSRLNLTVL----------EHRPPFDFHTLRAQDPDIGQNGRIRYIIQHGNEDAKF 1745
Query: 61 ---------ASYFNLDPATEHQGPIQDEGG------LSSTATVNIRVTDINDKNPEFQSL 105
++ LD + + + E +++ V I V D ND +P+F +
Sbjct: 1746 SVGEFTGVLSTTAELDRERKSRYYLVIEARNVVVPFYNASIYVTIFVGDKNDNSPKFVNS 1805
Query: 106 PYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALD 162
Y ++ E + G + R A D D G+N + +S+ D F +D+ TG I T + D
Sbjct: 1806 SYSVNIRELTKIGTPILRAQANDIDSGKNGEITFSLSSDALGIFRIDSKTGTIYTLQEFD 1865
Query: 163 Y 163
Y
Sbjct: 1866 Y 1866
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY 137
+G S TV + V D+ND PEF Y+ ++ E D G ++ +V A D D+G N +
Sbjct: 2300 DGRYKSHTTVTVNVKDVNDNAPEFLESSYQATLSEETDQGTSILKVSAEDRDDGSNRELT 2359
Query: 138 YSVPEDIP-FVVDANTGDIRTNKALD 162
Y+ + F ++ +G I T K ++
Sbjct: 2360 YAFVTSLDLFRLNTTSGVIYTAKKIE 2385
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 76/185 (41%), Gaps = 47/185 (25%)
Query: 33 LMQVKATDKDSGKFGLVEYRLL-DNNTDAASYFNLDPATEHQGPI----------QDEGG 81
+++V ATDKD G +G V Y ++ D+ +D +F L T +G I QD
Sbjct: 234 IVEVYATDKDIGTYGKVMYSVIHDSTSDPDGHFAL--RTNEKGIIVNLAKLDREKQDSYS 291
Query: 82 LS--------------STATVNIRVTDINDKNPEFQSLPY---EFSVPEGQD-GLAVGRV 123
L A V I + D+ND +PE Y + V E G V RV
Sbjct: 292 LRVLAHNPGSGGYYKRDLAYVTINILDVNDNSPEVSYTFYLDDAYQVYEDASVGTKVARV 351
Query: 124 HATDADEGQNAVV----------YYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
TD D G+NA + + S+ D V I K LD EKQ + RV
Sbjct: 352 WVTDKDAGKNAEIESVTIQGGNGHLSIAYDAANKVHI----ISLAKELDREKQPTF--RV 405
Query: 174 FLISK 178
++ +K
Sbjct: 406 YIYAK 410
Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 14/95 (14%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQDG---------LAVGRVHATDADEGQNAVVY 137
T+++ +TD+ND P F P SV +D +V + TD D G+N V
Sbjct: 2097 TLHVNLTDVNDNKPVF--YPANISVQLLEDDGSQSSSFTVRSVANLTTTDKDSGKNQEVT 2154
Query: 138 YSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
Y + D F ++A G + T LD EK +Y
Sbjct: 2155 YKIISGNVDDKFAINAQLGLLTTKGFLDREKHAVY 2189
>gi|156311353|ref|XP_001617773.1| hypothetical protein NEMVEDRAFT_v1g48709 [Nematostella vectensis]
gi|156195716|gb|EDO25673.1| predicted protein [Nematostella vectensis]
Length = 347
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 84/180 (46%), Gaps = 26/180 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA-------------- 61
++++G ++ +L ++ VKA DKDSG G+V+Y L+ N A
Sbjct: 161 AVYHGEISESADKL-TPIVTVKAIDKDSGSNGIVKYSLISGNDGDAFTILGNGTIVNAEV 219
Query: 62 ------SYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
S +NL+ Q GGL V I VTD+ND+ PEF S +
Sbjct: 220 LDREKKSTYNLEVRAVDQAT---SGGLEGVTRVVINVTDVNDQPPEFTSASVAHVSENSR 276
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERV 173
G V V A DADEG N V YS+ DI PF + + G +R + ++D EK+ Y RV
Sbjct: 277 VGDVVLTVIAVDADEGSNGDVVYSLGLDIGAPFSLGSKDGVLRVSGSMDREKKANYSIRV 336
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 8/108 (7%)
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
A++H P + SST V + V D ND +P+F +L Y F + E G ++G V A+D
Sbjct: 25 ASDHGNPSK-----SSTCVVLVTVADNNDNSPKFPALHYVFDIAEDAAVGASIGTVSASD 79
Query: 128 ADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
AD G+NA + YS+ PE F ++ TG+I + LD E + YL V
Sbjct: 80 ADIGENARLTYSIVSPEKATFSMNPVTGEITVGQRLDREGVEHYLLNV 127
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 73/165 (44%), Gaps = 28/165 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--QGPIQDEGG----- 81
+G ++ V A+D D G+ + Y ++ + + F+++P T G D G
Sbjct: 68 VGASIGTVSASDADIGENARLTYSIV---SPEKATFSMNPVTGEITVGQRLDREGVEHYL 124
Query: 82 LSSTATVN-------------IRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATD 127
L+ TAT N I V D+ND P+F++ Y + E D L + V A D
Sbjct: 125 LNVTATDNGRLNTNDASVDVYINVLDVNDNAPQFEAAVYHGEISESADKLTPIVTVKAID 184
Query: 128 ADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D G N +V YS+ + F + N G I + LD EK+ Y
Sbjct: 185 KDSGSNGIVKYSLISGNDGDAFTILGN-GTIVNAEVLDREKKSTY 228
>gi|354477312|ref|XP_003500865.1| PREDICTED: cadherin-10 [Cricetulus griseus]
Length = 788
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 164 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 222
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F V E
Sbjct: 223 PNMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESS 282
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G AVG V ATDAD G+NA V Y + + DI D G I K LDYE ++
Sbjct: 283 PVGTAVGSVKATDADMGKNAEVDYRIIDGDGTDMFDIITEKDTQEGIITVKKPLDYESRR 342
Query: 168 LYLERV 173
LY +V
Sbjct: 343 LYTLKV 348
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|395833145|ref|XP_003789604.1| PREDICTED: cadherin-9 [Otolemur garnettii]
Length = 740
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 90/197 (45%), Gaps = 37/197 (18%)
Query: 10 LEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNL 66
L M ++ + +K G +++QV ATD D +G V Y +L YF++
Sbjct: 106 LTMECQNVTEWNVMENKRYGGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSV 161
Query: 67 DPAT----------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQS 104
DP + ++Q IQ + GGLS T TVNI +TD+N+ P F
Sbjct: 162 DPESGIIKTALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQ 221
Query: 105 LPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIR 156
Y+F+ PE G +GR+ A D D G+NA V Y + + D+ D G I
Sbjct: 222 STYQFNSPESAPLGTHLGRIKANDPDLGENAEVEYRITDGDGADMFDVITDQDTQEGIIT 281
Query: 157 TNKALDYEKQQLYLERV 173
+ LD+E + LY RV
Sbjct: 282 VKQNLDFEHKMLYTLRV 298
>gi|344257115|gb|EGW13219.1| Protocadherin Fat 4 [Cricetulus griseus]
Length = 5152
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 76/164 (46%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y L+ D+ F +DP + EH+
Sbjct: 1927 GSKIMQLTAMDADEGANALVTYALISGADDS---FRIDPESGDLIATRRLDREHRSKYSL 1983
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G SS +NI ++D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1984 LVRADDGLQSSDMRINITISDVNDHTPKFSRPVYSFDIPEDTTPGSLVAAILATDDDSGV 2043
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG +ALDYE QQ Y+ V
Sbjct: 2044 NGEITYVVDEDDGDGVFFLNPVTGVFNLTRALDYETQQYYILTV 2087
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 26/172 (15%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL+ Y + N + A + +
Sbjct: 3269 ATIPESHSVGAVVRAVSARDRDTAMNGLIRYDISSGNEEGIFAINSSTGVLTLAKALDYE 3328
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEF---SVPEGQDGLAV 120
++H+ I D G ++ T ++ + V D+ND +P F +P EF + G V
Sbjct: 3329 LCSKHEMTISATDGGWVARTGSCSLTVNVIDVNDNSPVF--VPDEFFPTVMENAPSGTTV 3386
Query: 121 GRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y+V D+ FV+D NTG I T LD+E +Q Y
Sbjct: 3387 IHLNATDADSGTNAVIAYTVQSSDSDL-FVIDPNTGVITTQGFLDFETKQSY 3437
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V ATDKDSG G ++Y +++ N + + F ++ AT I+
Sbjct: 2860 ILTVSATDKDSGPNGQLDYEIVNGNKENS--FTINHATGEIRSIRPLDREKMSHYELTVK 2917
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQN 133
D+G S + +V I + D ND P F + + G V RV +D D G N
Sbjct: 2918 SSDKGSPSQSTSVRVIINILDENDNAPRFSQIFSAYVSENSPLGYTVTRVTTSDEDIGIN 2977
Query: 134 AVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
A+ YS+ + +PF ++ NTGDI ++ L+ E Y RV
Sbjct: 2978 AISRYSIADTSLPFTINPNTGDIVISRPLNREDTDRYRIRV 3018
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 72/167 (43%), Gaps = 22/167 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y + D + F ++P T
Sbjct: 2947 SQIFSAYVSENSPLGYTVTRVTTSDEDIGINAISRYSIADTSLP----FTINPNTGDIVI 3002
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
P+ E G + + V I VTDIND P F Y PE + G
Sbjct: 3003 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNTPRFSRPSYYLDCPELTEVGS 3062
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
V +V ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 3063 KVTQVSATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQVLKYQ 3109
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 77/173 (44%), Gaps = 21/173 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD---AASYFN--------L 66
FY A + +++V A+D D G GL+ Y +L N + A F+ L
Sbjct: 1385 FYQATVSETATNLTQVLRVSASDMDEGSNGLIHYSILKGNEERQFAIDRFSGQVTLIGKL 1444
Query: 67 D----PATEHQGPIQDEGGLS--STATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
D PA D G +S ST T++I + D ND P F V E + G
Sbjct: 1445 DYEATPAYSLLIQAVDSGAISLNSTCTLSIDILDENDNTPSFPKSTLFVDVLENMRIGEL 1504
Query: 120 VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD+D G NA ++Y++ F + NTG I K LD+E Q LY
Sbjct: 1505 VSSVTATDSDSGVNADLHYTITGSNNHGTFSISPNTGSIFLAKKLDFETQSLY 1557
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 74/162 (45%), Gaps = 23/162 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI----QDEGGL--- 82
G L+ + ATD D G V + L + +D F LDP + I ++E
Sbjct: 770 GTELLVLGATDGDLSDNGTVRFSLQEAESDQ-RLFRLDPVSGRLSTISSLDREEQAFYCL 828
Query: 83 ------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
SSTA VN+ + DIND +P F + Y + E + G + V V ATD D
Sbjct: 829 LVLATDLGSPPQSSTAQVNVSLLDINDNSPVFYPVQYFAHIQENEPGGSYVTTVSATDPD 888
Query: 130 EGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V YS+ + F ++A +G I T ALD E++ Y
Sbjct: 889 MGPNGTVQYSISAGDRSRFQINAKSGVISTRMALDREEKTAY 930
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 38 ATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGGLSSTAT--- 87
ATD D G G+ YR++ N A F LD G + +GGL T
Sbjct: 330 ATDSDIGSNGVDHRSYRIVRGN--EAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQY 387
Query: 88 -------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
VN+ V DIND P F S Y+ VPE G +V +V A D
Sbjct: 388 QLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAAD 447
Query: 128 ADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ADEG NA + Y + E PF +D TG I + LD+E ++ Y
Sbjct: 448 ADEGTNADIRYRLQDEGTPFQMDPETGLITVREPLDFEARRQY 490
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 68/157 (43%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +ATD DSG +EY LL+ + S +D G + D
Sbjct: 2240 VFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVHLTGELDREEVSNYSLTVVATD 2299
Query: 79 EGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y + E G + +V ATD+DEG N
Sbjct: 2300 KGQPPLSSSTEVVVMVLDINDNNPVFSQAVYRVQIKENTLTGTDIIQVSATDSDEGTNGQ 2359
Query: 136 VYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y + F +D+ TG I K LD E Y
Sbjct: 2360 VRYGIVGGNTHQEFRIDSVTGAITVAKTLDRETTPAY 2396
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF---NLDPAT 70
D + Y + + +V+A+DKDSG G + Y + D NT DA F L +
Sbjct: 1168 DQISYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTITDGNTGDAFGIFPDGQLYIKS 1227
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E +Q+ LS+T V + + D+ND P F S Y F E Q G
Sbjct: 1228 ELDRELQERYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAG 1287
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
VG+V A D D G N V Y+ P F + A TG+I D E
Sbjct: 1288 SFVGKVSAVDKDFGPNGEVRYAFEVTQPDFELHAVTGEITNTHKFDRE 1335
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 76/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3383 GTTVIHLNATDADSGTNAVIAYTVQSSDSD---LFVIDPNT---GVITTQGFLDFETKQS 3436
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S ATV+I++ N+ P F S Y F V E G AVG V A+
Sbjct: 3437 YHLTVKAFNVPDEEKCSFATVDIQLKGTNEYVPRFVSKLYYFEVSEAAPRGTAVGEVFAS 3496
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F + TG I + LD EK+ ERV L
Sbjct: 3497 DRDMGADGEVHYLIFGNSRKKGFQIHKMTGQIYVSGLLDREKE----ERVSL 3544
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L ATV++ + DIND P+F Y+ +V E L V RV A+D DEG N +++YS+
Sbjct: 1361 LKDQATVHVYMKDINDNAPKFLKDFYQATVSETATNLTQVLRVSASDMDEGSNGLIHYSI 1420
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E+ F +D +G + LDYE Y
Sbjct: 1421 LKGNEERQFAIDRFSGQVTLIGKLDYEATPAY 1452
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 76/159 (47%), Gaps = 22/159 (13%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQG-- 74
++G L++V A D KD G VEY + LDN+T S + + +Q
Sbjct: 3170 KVGTKLIKVTAMDDKDFGLNSEVEYFISNGNHLRKFKLDNDTGWISIASPLVSDLNQNFF 3229
Query: 75 ---PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D+G LSS ATV+I VT+ N PEF ++PE G V V A D
Sbjct: 3230 ITVTAKDKGNPPLSSQATVHITVTEENYHTPEFSQSHISATIPESHSVGAVVRAVSARDR 3289
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYE 164
D N ++ Y + E+ F ++++TG + KALDYE
Sbjct: 3290 DTAMNGLIRYDISSGNEEGIFAINSSTGVLTLAKALDYE 3328
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 77/176 (43%), Gaps = 27/176 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------- 67
Y ++ G ++QV ATD D G G V Y ++ NT F +D
Sbjct: 2330 YRVQIKENTLTGTDIIQVSATDSDEGTNGQVRYGIVGGNTHQE--FRIDSVTGAITVAKT 2387
Query: 68 ------PATEHQGPIQDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL- 118
PA D G T TV I + D+ND P F+ PY +VPE L
Sbjct: 2388 LDRETTPAYTLTVQATDRGSSPRTDVCTVTITLLDMNDFVPVFELSPYSVNVPENLGTLP 2447
Query: 119 -AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ +V A D D+G N+ + Y + ED F + A +G++R ++LD E + ++
Sbjct: 2448 RTILQVVARDDDQGPNSRLSYVLLGGNEDNAFALTA-SGELRVIQSLDREARDNFV 2502
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 72/159 (45%), Gaps = 20/159 (12%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY-------FNLDPATEHQGP------- 75
G + + ATD DSG G + Y + +++ D + FNL A +++
Sbjct: 2028 GSLVAAILATDDDSGVNGEITYVVDEDDGDGVFFLNPVTGVFNLTRALDYETQQYYILTV 2087
Query: 76 -IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
+D GG +T + D+ND P F Y S+ E G V + TDAD+G N
Sbjct: 2088 RAEDGGGQFTTVRAYFNILDVNDNPPVFSMSSYSTSLMENLPVGSTVLVFNVTDADDGVN 2147
Query: 134 AVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ + YS+ F VD + G ++T KALD E Q Y
Sbjct: 2148 SQLSYSIASGDSLGQFAVDKH-GVLKTLKALDRESQSFY 2185
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1895 AEVEITLQDINDNPPVFPTDTLDLTVEENIGDGSKIMQLTAMDADEGANALVTYALISGA 1954
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ + LD E + Y
Sbjct: 1955 DDSFRIDPESGDLIATRRLDREHRSKY 1981
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 69/173 (39%), Gaps = 32/173 (18%)
Query: 23 ARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPATEHQGP 75
A + + G ++ Q KA D D G G V Y L N N + L H G
Sbjct: 1073 AVENWQAGHSIYQAKAMDPDEGVNGRVLYSLKQNPKNLFAINEQNGNISLLGALDVHAGS 1132
Query: 76 IQDE--------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
Q E LSS+ + I V D+ND P F + YE ++ E + +V A+
Sbjct: 1133 YQLEILASDMGVPQLSSSIILTIYVHDVNDNPPVFDQISYEVTLSESEPVNSRFFKVQAS 1192
Query: 127 DADEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYL 170
D D G N + Y+ + D NTGD + LD E Q+ Y+
Sbjct: 1193 DKDSGANGEIAYT-------ITDGNTGDAFGIFPDGQLYIKSELDRELQERYV 1238
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV- 140
SS ++I V DIND P F+ P+ + E + V ATD D G N + Y +
Sbjct: 2822 FSSYEKLDITVLDINDNAPAFEKDPFVSEILENLSPRKILTVSATDKDSGPNGQLDYEIV 2881
Query: 141 --PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ F ++ TG+IR+ + LD EK Y
Sbjct: 2882 NGNKENSFTINHATGEIRSIRPLDREKMSHY 2912
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
G ++ VNI V D+ND P F Q++ +V Q G ++ + A D DEG N V Y
Sbjct: 1042 GAVTGDTLVNITVKDLNDNAPHFLQAVESINAVENWQAGHSIYQAKAMDPDEGVNGRVLY 1101
Query: 139 SV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
S+ P+++ F ++ G+I ALD LE
Sbjct: 1102 SLKQNPKNL-FAINEQNGNISLLGALDVHAGSYQLE 1136
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 76/159 (47%), Gaps = 24/159 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ-------------- 77
T++QV A D D G + Y LL N D A F L + E + IQ
Sbjct: 2449 TILQVVARDDDQGPNSRLSYVLLGGNEDNA--FALTASGELR-VIQSLDREARDNFVLVV 2505
Query: 78 ---DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEG 131
D G L+ T T+N+ V DIND P F S + ++PE G V V+A+DAD
Sbjct: 2506 TAADAGSPALTGTGTINVLVDDINDNVPTFASNMHFTAIPEDAPTGTDVLLVNASDADAA 2565
Query: 132 QNAVVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
NAV+ YS + + F ++ +TG I T+ LD E + Y
Sbjct: 2566 ANAVISYSIIGGNSQFTINPSTGQIITSALLDRETKDNY 2604
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 71/160 (44%), Gaps = 27/160 (16%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH 72
+ DSL G A DKH GV L +KA D++S F + ++ D+ AS F
Sbjct: 2156 SGDSL--GQFAVDKH--GV-LKTLKALDRESQSFYNLVIQVHDSPQPPASRF-------- 2202
Query: 73 QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+STA V+I + D+ND P F S P +PE V + ATD D G
Sbjct: 2203 ----------TSTAQVSIILLDVNDNPPMFLS-PKLTYIPENTPIDTVVFKAQATDPDSG 2251
Query: 132 QNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
N+ + Y++ P F + G++ LD E+ Y
Sbjct: 2252 PNSYIEYTLLNPLGNKFSIGTIDGEVHLTGELDREEVSNY 2291
Score = 39.7 bits (91), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N V Y + +
Sbjct: 1686 VTILVTDLNDNVPMFISQNALAADPSAMIGSVLTTIMAADPDEGANGEVEYEIVNGDTDT 1745
Query: 146 FVVDANTGDIRTNKAL 161
F VD +GD+R AL
Sbjct: 1746 FTVDRYSGDLRVASAL 1761
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 69/175 (39%), Gaps = 22/175 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G V+Y + + ++ LD
Sbjct: 865 YFAHIQENEPGGSYVTTVSATDPDMGPNGTVQYSISAGDRSRFQINAKSGVISTRMALDR 924
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V + V D D P F Y F V E G VG
Sbjct: 925 EEKTAYQLQIVATDGGNLQSPNQAIVTVTVLDTQDNPPVFSQAAYSFVVFENVALGYHVG 984
Query: 122 RVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V AT D NA + Y + + F ++ TG + T +D E+Q Y RV
Sbjct: 985 SVSATTMD--LNANISYLITTGDQRGMFAMNPVTGQLTTASVIDREEQSFYQLRV 1037
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 68/166 (40%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG + Y + +N F++ P T E Q
Sbjct: 1500 RIGELVSSVTATDSDSGVNADLHYTITGSNNHGT--FSISPNTGSIFLAKKLDFETQSLY 1557
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G SST +V I V D ND P F S+ E G +V V A D
Sbjct: 1558 KLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIMENVPLGTSVISVTAHD 1617
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + Y++ + +P F +D G I T+ +D E L+
Sbjct: 1618 PDADINGQLSYAIIQQMPRGNHFSIDEVKGTIYTSAEIDREFANLF 1663
Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 75 PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQN 133
P + SS A++ I V DIND P F Y ++ E G V V ATD D G N
Sbjct: 619 PTAEVQARSSVASLVIFVNDINDHPPVFAQQVYRVNLSEEVPPGSYVSGVSATDGDSGLN 678
Query: 134 AVVYYSV 140
A + YS+
Sbjct: 679 ANLRYSI 685
>gi|149026447|gb|EDL82597.1| cadherin 10, isoform CRA_b [Rattus norvegicus]
Length = 769
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 145 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 203
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F V E
Sbjct: 204 PNMNRENKEQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESS 263
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G AVG V ATDAD G+NA V Y + + DI D G I K LDYE ++
Sbjct: 264 PVGTAVGSVKATDADTGKNAEVDYRIIDGDGTDMFDIITEKDTQEGIITVKKPLDYENRR 323
Query: 168 LYLERV 173
LY +V
Sbjct: 324 LYTLKV 329
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 129 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 188
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 189 YFSVEPETGIIRT 201
>gi|344242175|gb|EGV98278.1| Cadherin-10 [Cricetulus griseus]
Length = 723
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 99 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 157
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F V E
Sbjct: 158 PNMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESS 217
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G AVG V ATDAD G+NA V Y + + DI D G I K LDYE ++
Sbjct: 218 PVGTAVGSVKATDADMGKNAEVDYRIIDGDGTDMFDIITEKDTQEGIITVKKPLDYESRR 277
Query: 168 LYLERV 173
LY +V
Sbjct: 278 LYTLKV 283
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 83 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 142
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 143 YFSVEPETGIIRT 155
>gi|47220924|emb|CAG03457.1| unnamed protein product [Tetraodon nigroviridis]
Length = 558
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 96/209 (45%), Gaps = 52/209 (24%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G +++QV ATD D +G V Y +L+ YF++DP T
Sbjct: 91 YTAQVPEMSDIGTSVIQVTATDADDATYGNSARVVYSILEGQ----PYFSVDPETALSSR 146
Query: 71 ---------------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQ 103
+Q IQ + GGLS T TV+I ++D+ND P F
Sbjct: 147 RRKSGGLVKTALPGMDREVKENYQVVIQAKDMAGQMGGLSGTTTVSITLSDVNDNPPRFT 206
Query: 104 SLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVV-YYSVPEDIP--FVVDANT----GDI 155
YEF VPE + G VG V A DAD G+NA + Y + D P F + AN G I
Sbjct: 207 KTLYEFRVPESLEPGSVVGVVRALDADIGENAQMDYRIIGSDGPGVFEIAANRSTQDGVI 266
Query: 156 RTNKALDYEKQQ-----LYLERVFLISKF 179
K LD+EK+Q L +E V + +F
Sbjct: 267 VLRKPLDFEKKQQFGLRLQVENVHINPRF 295
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F PY VPE D G +V +V ATDAD+ G +A V YS+ E P
Sbjct: 74 IKIHDINDNEPKFTRDPYTAQVPEMSDIGTSVIQVTATDADDATYGNSARVVYSILEGQP 133
Query: 146 -FVVDANTG 153
F VD T
Sbjct: 134 YFSVDPETA 142
>gi|350594185|ref|XP_003359781.2| PREDICTED: cadherin-9 [Sus scrofa]
Length = 789
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 87/189 (46%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + +G +++QV ATD D +G V Y +L YF++DP +
Sbjct: 163 LYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGIIK 218
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
++Q IQ + GGLS T TVNI +TD+N+ P F Y+F P
Sbjct: 219 TALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSMYQFHSP 278
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYE 164
E G +GR+ A D D G+NA + YS+ E D+ D G I + LD+E
Sbjct: 279 ESVPLGTHLGRIKANDPDLGENAEMEYSIAEGEGADMFDVITDKDTQEGIITVKQNLDFE 338
Query: 165 KQQLYLERV 173
+ LY +V
Sbjct: 339 SKMLYTLKV 347
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPKFTKDLYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRT 157
F VD +G I+T
Sbjct: 207 YFSVDPESGIIKT 219
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G + Y + FV+D NTGDI K LD E++ LY+
Sbjct: 68 GTDTQYVGKLH-TDQDKGDGNLKYILTGDGAGSLFVIDENTGDIHAAKKLDREEKSLYVL 126
Query: 172 RVFLISK 178
R I +
Sbjct: 127 RAKAIDR 133
>gi|148676982|gb|EDL08929.1| mCG123390, isoform CRA_c [Mus musculus]
Length = 334
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 83/175 (47%), Gaps = 31/175 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------------EH 72
+G +++QV ATD D +G R++ + YF+++P T ++
Sbjct: 4 VGTSVVQVTATDADDPSYGN-SARVIYSILQGQPYFSVEPETGIIRTALPNMNRENKEQY 62
Query: 73 QGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHA 125
Q IQ + GGLS T TVNI +TD+ND P F V E G AVG V A
Sbjct: 63 QVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESSPVGTAVGSVKA 122
Query: 126 TDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
TDAD G+NA V Y + + DI D G I K LDYE ++LY +V
Sbjct: 123 TDADTGKNAEVDYRIIDGDGTDMFDIITEKDTQEGIITVKKPLDYENRRLYTLKV 177
>gi|354495052|ref|XP_003509646.1| PREDICTED: protocadherin Fat 4 [Cricetulus griseus]
Length = 4981
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 76/164 (46%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y L+ D+ F +DP + EH+
Sbjct: 1756 GSKIMQLTAMDADEGANALVTYALISGADDS---FRIDPESGDLIATRRLDREHRSKYSL 1812
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G SS +NI ++D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1813 LVRADDGLQSSDMRINITISDVNDHTPKFSRPVYSFDIPEDTTPGSLVAAILATDDDSGV 1872
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG +ALDYE QQ Y+ V
Sbjct: 1873 NGEITYVVDEDDGDGVFFLNPVTGVFNLTRALDYETQQYYILTV 1916
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 26/172 (15%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL+ Y + N + A + +
Sbjct: 3098 ATIPESHSVGAVVRAVSARDRDTAMNGLIRYDISSGNEEGIFAINSSTGVLTLAKALDYE 3157
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEF---SVPEGQDGLAV 120
++H+ I D G ++ T ++ + V D+ND +P F +P EF + G V
Sbjct: 3158 LCSKHEMTISATDGGWVARTGSCSLTVNVIDVNDNSPVF--VPDEFFPTVMENAPSGTTV 3215
Query: 121 GRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y+V D+ FV+D NTG I T LD+E +Q Y
Sbjct: 3216 IHLNATDADSGTNAVIAYTVQSSDSDL-FVIDPNTGVITTQGFLDFETKQSY 3266
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V ATDKDSG G ++Y +++ N + + F ++ AT I+
Sbjct: 2689 ILTVSATDKDSGPNGQLDYEIVNGNKENS--FTINHATGEIRSIRPLDREKMSHYELTVK 2746
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQN 133
D+G S + +V I + D ND P F + + G V RV +D D G N
Sbjct: 2747 SSDKGSPSQSTSVRVIINILDENDNAPRFSQIFSAYVSENSPLGYTVTRVTTSDEDIGIN 2806
Query: 134 AVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
A+ YS+ + +PF ++ NTGDI ++ L+ E Y RV
Sbjct: 2807 AISRYSIADTSLPFTINPNTGDIVISRPLNREDTDRYRIRV 2847
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 72/168 (42%), Gaps = 22/168 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y + D + F ++P T
Sbjct: 2776 SQIFSAYVSENSPLGYTVTRVTTSDEDIGINAISRYSIADTSLP----FTINPNTGDIVI 2831
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
P+ E G + + V I VTDIND P F Y PE + G
Sbjct: 2832 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNTPRFSRPSYYLDCPELTEVGS 2891
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
V +V ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 2892 KVTQVSATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQVLKYQN 2939
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 77/173 (44%), Gaps = 21/173 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD---AASYFN--------L 66
FY A + +++V A+D D G GL+ Y +L N + A F+ L
Sbjct: 1214 FYQATVSETATNLTQVLRVSASDMDEGSNGLIHYSILKGNEERQFAIDRFSGQVTLIGKL 1273
Query: 67 D----PATEHQGPIQDEGGLS--STATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
D PA D G +S ST T++I + D ND P F V E + G
Sbjct: 1274 DYEATPAYSLLIQAVDSGAISLNSTCTLSIDILDENDNTPSFPKSTLFVDVLENMRIGEL 1333
Query: 120 VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD+D G NA ++Y++ F + NTG I K LD+E Q LY
Sbjct: 1334 VSSVTATDSDSGVNADLHYTITGSNNHGTFSISPNTGSIFLAKKLDFETQSLY 1386
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 74/162 (45%), Gaps = 23/162 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI----QDEGGL--- 82
G L+ + ATD D G V + L + +D F LDP + I ++E
Sbjct: 599 GTELLVLGATDGDLSDNGTVRFSLQEAESDQ-RLFRLDPVSGRLSTISSLDREEQAFYCL 657
Query: 83 ------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
SSTA VN+ + DIND +P F + Y + E + G + V V ATD D
Sbjct: 658 LVLATDLGSPPQSSTAQVNVSLLDINDNSPVFYPVQYFAHIQENEPGGSYVTTVSATDPD 717
Query: 130 EGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V YS+ + F ++A +G I T ALD E++ Y
Sbjct: 718 MGPNGTVQYSISAGDRSRFQINAKSGVISTRMALDREEKTAY 759
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 38 ATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGGLSSTAT--- 87
ATD D G G+ YR++ N A F LD G + +GGL T
Sbjct: 159 ATDSDIGSNGVDHRSYRIVRGN--EAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQY 216
Query: 88 -------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
VN+ V DIND P F S Y+ VPE G +V +V A D
Sbjct: 217 QLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAAD 276
Query: 128 ADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ADEG NA + Y + E PF +D TG I + LD+E ++ Y
Sbjct: 277 ADEGTNADIRYRLQDEGTPFQMDPETGLITVREPLDFEARRQY 319
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 68/157 (43%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +ATD DSG +EY LL+ + S +D G + D
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVHLTGELDREEVSNYSLTVVATD 2128
Query: 79 EGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y + E G + +V ATD+DEG N
Sbjct: 2129 KGQPPLSSSTEVVVMVLDINDNNPVFSQAVYRVQIKENTLTGTDIIQVSATDSDEGTNGQ 2188
Query: 136 VYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y + F +D+ TG I K LD E Y
Sbjct: 2189 VRYGIVGGNTHQEFRIDSVTGAITVAKTLDRETTPAY 2225
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF---NLDPAT 70
D + Y + + +V+A+DKDSG G + Y + D NT DA F L +
Sbjct: 997 DQISYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTITDGNTGDAFGIFPDGQLYIKS 1056
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E +Q+ LS+T V + + D+ND P F S Y F E Q G
Sbjct: 1057 ELDRELQERYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAG 1116
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
VG+V A D D G N V Y+ P F + A TG+I D E
Sbjct: 1117 SFVGKVSAVDKDFGPNGEVRYAFEVTQPDFELHAVTGEITNTHKFDRE 1164
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 76/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3212 GTTVIHLNATDADSGTNAVIAYTVQSSDSD---LFVIDPNT---GVITTQGFLDFETKQS 3265
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S ATV+I++ N+ P F S Y F V E G AVG V A+
Sbjct: 3266 YHLTVKAFNVPDEEKCSFATVDIQLKGTNEYVPRFVSKLYYFEVSEAAPRGTAVGEVFAS 3325
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F + TG I + LD EK+ ERV L
Sbjct: 3326 DRDMGADGEVHYLIFGNSRKKGFQIHKMTGQIYVSGLLDREKE----ERVSL 3373
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L ATV++ + DIND P+F Y+ +V E L V RV A+D DEG N +++YS+
Sbjct: 1190 LKDQATVHVYMKDINDNAPKFLKDFYQATVSETATNLTQVLRVSASDMDEGSNGLIHYSI 1249
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E+ F +D +G + LDYE Y
Sbjct: 1250 LKGNEERQFAIDRFSGQVTLIGKLDYEATPAY 1281
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 76/159 (47%), Gaps = 22/159 (13%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQG-- 74
++G L++V A D KD G VEY + LDN+T S + + +Q
Sbjct: 2999 KVGTKLIKVTAMDDKDFGLNSEVEYFISNGNHLRKFKLDNDTGWISIASPLVSDLNQNFF 3058
Query: 75 ---PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D+G LSS ATV+I VT+ N PEF ++PE G V V A D
Sbjct: 3059 ITVTAKDKGNPPLSSQATVHITVTEENYHTPEFSQSHISATIPESHSVGAVVRAVSARDR 3118
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYE 164
D N ++ Y + E+ F ++++TG + KALDYE
Sbjct: 3119 DTAMNGLIRYDISSGNEEGIFAINSSTGVLTLAKALDYE 3157
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 77/176 (43%), Gaps = 27/176 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------- 67
Y ++ G ++QV ATD D G G V Y ++ NT F +D
Sbjct: 2159 YRVQIKENTLTGTDIIQVSATDSDEGTNGQVRYGIVGGNTHQE--FRIDSVTGAITVAKT 2216
Query: 68 ------PATEHQGPIQDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL- 118
PA D G T TV I + D+ND P F+ PY +VPE L
Sbjct: 2217 LDRETTPAYTLTVQATDRGSSPRTDVCTVTITLLDMNDFVPVFELSPYSVNVPENLGTLP 2276
Query: 119 -AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ +V A D D+G N+ + Y + ED F + A +G++R ++LD E + ++
Sbjct: 2277 RTILQVVARDDDQGPNSRLSYVLLGGNEDNAFALTA-SGELRVIQSLDREARDNFV 2331
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 72/159 (45%), Gaps = 20/159 (12%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY-------FNLDPATEHQGP------- 75
G + + ATD DSG G + Y + +++ D + FNL A +++
Sbjct: 1857 GSLVAAILATDDDSGVNGEITYVVDEDDGDGVFFLNPVTGVFNLTRALDYETQQYYILTV 1916
Query: 76 -IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
+D GG +T + D+ND P F Y S+ E G V + TDAD+G N
Sbjct: 1917 RAEDGGGQFTTVRAYFNILDVNDNPPVFSMSSYSTSLMENLPVGSTVLVFNVTDADDGVN 1976
Query: 134 AVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ + YS+ F VD + G ++T KALD E Q Y
Sbjct: 1977 SQLSYSIASGDSLGQFAVDKH-GVLKTLKALDRESQSFY 2014
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1724 AEVEITLQDINDNPPVFPTDTLDLTVEENIGDGSKIMQLTAMDADEGANALVTYALISGA 1783
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ + LD E + Y
Sbjct: 1784 DDSFRIDPESGDLIATRRLDREHRSKY 1810
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 69/173 (39%), Gaps = 32/173 (18%)
Query: 23 ARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPATEHQGP 75
A + + G ++ Q KA D D G G V Y L N N + L H G
Sbjct: 902 AVENWQAGHSIYQAKAMDPDEGVNGRVLYSLKQNPKNLFAINEQNGNISLLGALDVHAGS 961
Query: 76 IQDE--------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
Q E LSS+ + I V D+ND P F + YE ++ E + +V A+
Sbjct: 962 YQLEILASDMGVPQLSSSIILTIYVHDVNDNPPVFDQISYEVTLSESEPVNSRFFKVQAS 1021
Query: 127 DADEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYL 170
D D G N + Y+ + D NTGD + LD E Q+ Y+
Sbjct: 1022 DKDSGANGEIAYT-------ITDGNTGDAFGIFPDGQLYIKSELDRELQERYV 1067
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV- 140
SS ++I V DIND P F+ P+ + E + V ATD D G N + Y +
Sbjct: 2651 FSSYEKLDITVLDINDNAPAFEKDPFVSEILENLSPRKILTVSATDKDSGPNGQLDYEIV 2710
Query: 141 --PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ F ++ TG+IR+ + LD EK Y
Sbjct: 2711 NGNKENSFTINHATGEIRSIRPLDREKMSHY 2741
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
G ++ VNI V D+ND P F Q++ +V Q G ++ + A D DEG N V Y
Sbjct: 871 GAVTGDTLVNITVKDLNDNAPHFLQAVESINAVENWQAGHSIYQAKAMDPDEGVNGRVLY 930
Query: 139 SV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
S+ P+++ F ++ G+I ALD LE
Sbjct: 931 SLKQNPKNL-FAINEQNGNISLLGALDVHAGSYQLE 965
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 76/159 (47%), Gaps = 24/159 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ-------------- 77
T++QV A D D G + Y LL N D A F L + E + IQ
Sbjct: 2278 TILQVVARDDDQGPNSRLSYVLLGGNEDNA--FALTASGELR-VIQSLDREARDNFVLVV 2334
Query: 78 ---DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEG 131
D G L+ T T+N+ V DIND P F S + ++PE G V V+A+DAD
Sbjct: 2335 TAADAGSPALTGTGTINVLVDDINDNVPTFASNMHFTAIPEDAPTGTDVLLVNASDADAA 2394
Query: 132 QNAVVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
NAV+ YS + + F ++ +TG I T+ LD E + Y
Sbjct: 2395 ANAVISYSIIGGNSQFTINPSTGQIITSALLDRETKDNY 2433
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 27/160 (16%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH 72
+ DSL G A DKH + L +KA D++S F + ++ D+ AS F
Sbjct: 1985 SGDSL--GQFAVDKHGV---LKTLKALDRESQSFYNLVIQVHDSPQPPASRF-------- 2031
Query: 73 QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+STA V+I + D+ND P F S P +PE V + ATD D G
Sbjct: 2032 ----------TSTAQVSIILLDVNDNPPMFLS-PKLTYIPENTPIDTVVFKAQATDPDSG 2080
Query: 132 QNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
N+ + Y++ P F + G++ LD E+ Y
Sbjct: 2081 PNSYIEYTLLNPLGNKFSIGTIDGEVHLTGELDREEVSNY 2120
Score = 39.7 bits (91), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N V Y + +
Sbjct: 1515 VTILVTDLNDNVPMFISQNALAADPSAMIGSVLTTIMAADPDEGANGEVEYEIVNGDTDT 1574
Query: 146 FVVDANTGDIRTNKAL 161
F VD +GD+R AL
Sbjct: 1575 FTVDRYSGDLRVASAL 1590
Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 69/175 (39%), Gaps = 22/175 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G V+Y + + ++ LD
Sbjct: 694 YFAHIQENEPGGSYVTTVSATDPDMGPNGTVQYSISAGDRSRFQINAKSGVISTRMALDR 753
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V + V D D P F Y F V E G VG
Sbjct: 754 EEKTAYQLQIVATDGGNLQSPNQAIVTVTVLDTQDNPPVFSQAAYSFVVFENVALGYHVG 813
Query: 122 RVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V AT D NA + Y + + F ++ TG + T +D E+Q Y RV
Sbjct: 814 SVSATTMD--LNANISYLITTGDQRGMFAMNPVTGQLTTASVIDREEQSFYQLRV 866
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 68/166 (40%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG + Y + +N F++ P T E Q
Sbjct: 1329 RIGELVSSVTATDSDSGVNADLHYTITGSNNHGT--FSISPNTGSIFLAKKLDFETQSLY 1386
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G SST +V I V D ND P F S+ E G +V V A D
Sbjct: 1387 KLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIMENVPLGTSVISVTAHD 1446
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + Y++ + +P F +D G I T+ +D E L+
Sbjct: 1447 PDADINGQLSYAIIQQMPRGNHFSIDEVKGTIYTSAEIDREFANLF 1492
Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 75 PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQN 133
P + SS A++ I V DIND P F Y ++ E G V V ATD D G N
Sbjct: 448 PTAEVQARSSVASLVIFVNDINDHPPVFAQQVYRVNLSEEVPPGSYVSGVSATDGDSGLN 507
Query: 134 AVVYYSV 140
A + YS+
Sbjct: 508 ANLRYSI 514
>gi|348511876|ref|XP_003443469.1| PREDICTED: protocadherin Fat 4 [Oreochromis niloticus]
Length = 4971
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 23/161 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ ATD D G LV Y ++ D+ F +DP + E +
Sbjct: 1732 GFKIMQLTATDADEGPNALVTYTIISGADDS---FRIDPESGDLIATKKLDRERRSKYSL 1788
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQ 132
D+G SS T+NI V D+ND P+F Y F +PE G V + A+D+D G
Sbjct: 1789 LVRADDGKQSSDMTLNITVKDVNDHTPKFSRATYSFDIPEDMVPGSIVAAILASDSDSGV 1848
Query: 133 NAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
N V Y + ED F+++ TG + LDYE QQ Y+
Sbjct: 1849 NGEVTYLLEEDDEDETFLLNPVTGFFNVTRPLDYETQQYYI 1889
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 76/162 (46%), Gaps = 22/162 (13%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LDPATEHQGPIQ 77
+G + + A DKD GL+ Y + N N LD + Q ++
Sbjct: 3080 VGTAIRTLSARDKDKEMNGLITYNITSGNDKGLFALNSRTGVLSLAHPLDFEEKQQHELR 3139
Query: 78 ----DEGGLSSTA--TVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADE 130
D G ++ T+ +V I VTD+ND P F Y V E G V +++ATD D
Sbjct: 3140 VSATDGGWIAKTSYVSVTIHVTDVNDNPPVFDPDEYFPIVQENVPSGTTVIKLNATDLDS 3199
Query: 131 GQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G NAV+ Y S D+ FV+D NTG I T LDYE +Q+Y
Sbjct: 3200 GANAVMAYVIQSSDSDL-FVIDPNTGTITTQGFLDYEAKQVY 3240
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 24/162 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQDEG--------- 80
++ V A D DSG G +EY +++ N + + F+++ AT P+ E
Sbjct: 2663 VLMVSAVDLDSGPNGQLEYAIIEGNKENS--FSINRATGEIRTTRPLDREKVALYTLKVK 2720
Query: 81 ----GL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
GL ++ V I V D+ND P F + + +V E G V RV TD D G
Sbjct: 2721 ATDRGLPPKNTIVKVLINVLDVNDNAPRFSKI-FSATVAENAPVGYTVTRVTTTDEDAGS 2779
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA+ YS+ + +PF ++ NTGDI ++ L+ E Y+ +V
Sbjct: 2780 NAISRYSITDTSLPFNINPNTGDITISRPLNREDTNHYIVKV 2821
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 22/167 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + +G T+ +V TD+D+G + Y + TD + FN++P T
Sbjct: 2750 SKIFSATVAENAPVGYTVTRVTTTDEDAGSNAISRYSI----TDTSLPFNINPNTGDITI 2805
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
P+ E G + + V + +TDIND P F Y PE + G
Sbjct: 2806 SRPLNREDTNHYIVKVSAHDSGWTVSTDVTVFITDINDNAPRFSRPSYYLDYPELTEVGS 2865
Query: 119 AVGRVHATDADEGQNAVVYYSV-PEDIPFVVDANTGDIRTNKALDYE 164
V RV ATD DE N ++Y + + F ++A+TG+I + L Y+
Sbjct: 2866 LVTRVSATDPDEDFNGKIFYFIRSQSEYFRINASTGEIFVKQQLKYQ 2912
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 75/164 (45%), Gaps = 32/164 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++++ ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3186 GTTVIKLNATDLDSGANAVMAYVIQSSDSD---LFVIDPNT---GTITTQGFLDYEAKQV 3239
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S A VNI++ N+ P F S Y F + E G VG V A+
Sbjct: 3240 YHLTVKAFNVPDEERCSFANVNIQLKGANEYVPRFVSKQYYFEISESAPKGTVVGEVFAS 3299
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQ 167
D D+G++ VVYY + F ++ TG I LD EK++
Sbjct: 3300 DRDQGEDGVVYYLIFGRSRKKGFGINKRTGQIYVTGTLDREKEE 3343
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 75/170 (44%), Gaps = 22/170 (12%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------ 68
D L Y + + + +V+ATDKDSG G + Y + NT F + P
Sbjct: 973 DQLSYEVIILESEPVNSRFFKVEATDKDSGLNGEIMYDIAGGNT--GDVFGIFPDGQLYI 1030
Query: 69 ATEHQGPIQDEGGLSST----------ATVNIRVT--DINDKNPEFQSLPYEFSVPEGQD 116
E IQD L T ATVN+ V D+ND P F S Y F E Q
Sbjct: 1031 KAELDREIQDRYNLVVTAKDRAVEPLSATVNVTVILDDVNDNRPLFNSTNYVFHFEEEQK 1090
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
G VG+V A D D G N+ V Y+ P F ++A TG++ + LD E
Sbjct: 1091 RGSLVGQVFAEDKDFGPNSEVRYTFETPQPNFELNAITGELTSTLQLDRE 1140
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDIPF 146
VN+ + DIND P F+ Y+ SV E G ++ + A+D DEG NA + Y + E PF
Sbjct: 221 VNVTIQDINDNPPIFEQDQYQTSVFEDAAVGSSILEITASDQDEGANAEIRYFLDEGTPF 280
Query: 147 VVDANTGDIRTNKALDYEKQQLY 169
+D G I ++LDYE ++ Y
Sbjct: 281 QIDPKAGTIIIKESLDYESKKEY 303
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 70/160 (43%), Gaps = 25/160 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
L++V A+D D K GL+ Y + + N + F +D ++ +
Sbjct: 1205 LLRVSASDVDENKNGLLRYHIAEGNEEGQ--FTIDSSSGQVTLVGKLDYESTSSYSLKII 1262
Query: 78 --DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQ 132
D G LSS+ ++I + D ND +P F V E + G V V TDAD GQ
Sbjct: 1263 AVDAGAVPLSSSCMLSISILDENDNSPIFPKSSLSVDVLENMRIGELVASVTGTDADSGQ 1322
Query: 133 NAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
NA + YS+ F + NTG I K LD+E Q Y
Sbjct: 1323 NADITYSITATNNHGTFSISPNTGSIFLVKKLDFETQSFY 1362
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 67/157 (42%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI---------------- 76
+ +ATD DSG VEY L + S +D G +
Sbjct: 2045 VFTTQATDADSGPNSYVEYSLRGPFGNKFSIGTIDGDVRLIGELDREELSNYTLTVVATD 2104
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAV 135
+ E LSST V + V D+ND P F Y+ + E G V +V A+DADEG N
Sbjct: 2105 KGEPPLSSTMDVTMVVLDVNDNTPSFSQNIYDIEIEENILTGTDVIQVFASDADEGTNGQ 2164
Query: 136 VYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ +S+ + F +D+ TG I K LD E + Y
Sbjct: 2165 IRFSISGGNTNSDFRIDSVTGVISVAKQLDREARSSY 2201
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 78/183 (42%), Gaps = 30/183 (16%)
Query: 14 SDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT--- 70
+ S+F+ + D G ++ V ++D D G G++ T F+++PAT
Sbjct: 2341 TSSIFHTTIMEDA-PTGTDVLLVNSSDADVGVNGVISL------TGGHGQFSINPATGQI 2393
Query: 71 --------EHQGPIQ------DEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
E + Q D G GLSS+ATV++ V DIND P F PY +P
Sbjct: 2394 ITSSLLDREDRANYQLLVVATDGGQPEGLSSSATVSVTVADINDNPPRFHHHPYVTHIPA 2453
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
G V V TD D G NA ++YS+ F +D G I N+ L +
Sbjct: 2454 STAAGSLVFAVTVTDEDSGSNAQLHYSLMGRNAEKFKIDPVRGAITANERLTGNSEVTLT 2513
Query: 171 ERV 173
RV
Sbjct: 2514 VRV 2516
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + D+ND P F + + ++ E DG + ++ ATDADEG NA+V Y++
Sbjct: 1700 AEVEITLQDVNDNPPVFPNDILDVTIEENVGDGFKIMQLTATDADEGPNALVTYTIISGA 1759
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ K LD E++ Y
Sbjct: 1760 DDSFRIDPESGDLIATKKLDRERRSKY 1786
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE 142
SS + I V D+ND +P F P+ + E V V A D D G N + Y++ E
Sbjct: 2626 SSYEKLEITVLDVNDNHPVFDKDPFHAEILENLPPKGVLMVSAVDLDSGPNGQLEYAIIE 2685
Query: 143 ---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ F ++ TG+IRT + LD EK LY +V
Sbjct: 2686 GNKENSFSINRATGEIRTTRPLDREKVALYTLKV 2719
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
L S VNI + DIND P F + Y +V E + G V V ATD D G+N V Y +
Sbjct: 646 LHSVGKVNITLWDINDNRPVFYPVQYFANVKENEPSGSYVTTVSATDPDLGRNGTVKYFI 705
Query: 141 P--EDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ F +++NTG I T LD E++ Y +V
Sbjct: 706 TAGDSSKFRINSNTGKITTLVPLDREEKTAYQLQV 740
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 13/124 (10%)
Query: 60 AASYFNLDPATEHQG---PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
A+ F+ + QG P++D+ A V + + DIND P+F ++ S+ E Q
Sbjct: 1147 GAAVFSFVVVSSDQGLPKPLRDQ------AKVQVYIQDINDNPPKFTKDIFQASISESAQ 1200
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYLER 172
+ + RV A+D DE +N ++ Y + E+ F +D+++G + LDYE Y +
Sbjct: 1201 NMTQLLRVSASDVDENKNGLLRYHIAEGNEEGQFTIDSSSGQVTLVGKLDYESTSSYSLK 1260
Query: 173 VFLI 176
+ +
Sbjct: 1261 IIAV 1264
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 66/159 (41%), Gaps = 28/159 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAA---------------------SYFNLDPATE 71
++QV A D D G G + Y L N + A Y L AT+
Sbjct: 2255 ILQVIARDDDQGANGQLSYMLSGGNDEGAFTLSSSGQLSLTETLDREVQEKYILLITATD 2314
Query: 72 HQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE 130
P LS T TV + V D+ND P F S + ++ E G V V+++DAD
Sbjct: 2315 SGTP-----SLSGTGTVTVMVDDVNDNVPVFTSSIFHTTIMEDAPTGTDVLLVNSSDADV 2369
Query: 131 GQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V+ + F ++ TG I T+ LD E + Y
Sbjct: 2370 GVNGVISLTGGHG-QFSINPATGQIITSSLLDREDRANY 2407
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 30/172 (17%)
Query: 28 ELGVTLMQVKATDKDSGKFGL---VEYRLLDNNTDAASYFNLDPAT-------------- 70
++G L++V A DK FGL VEY + N +++ F LD +
Sbjct: 2973 KVGTRLLRVVAQDKK--DFGLNSEVEYLMTGGN--SSNKFKLDKTSGWITVASSLTSDMN 3028
Query: 71 ---EHQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVH 124
+ + D+G LS+ TV+I VT+ N PEF +VPE G A+ +
Sbjct: 3029 KIFQIKITASDKGNPPLSAQTTVSIAVTEENHHTPEFSQSQISATVPESLAVGTAIRTLS 3088
Query: 125 ATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
A D D+ N ++ Y++ + F +++ TG + LD+E++Q + RV
Sbjct: 3089 ARDKDKEMNGLITYNITSGNDKGLFALNSRTGVLSLAHPLDFEEKQQHELRV 3140
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 21/162 (12%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLDPATEHQGPI 76
G ++QV A+D D G G + + + NT++ A + + + + +
Sbjct: 2146 GTDVIQVFASDADEGTNGQIRFSISGGNTNSDFRIDSVTGVISVAKQLDREARSSYSLVV 2205
Query: 77 QDEGGLSS----TATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA--VGRVHATDADE 130
Q SS ATVNI + D+ND +P F+ PY +V E + L + +V A D D+
Sbjct: 2206 QAADRGSSPRVDRATVNIVLLDVNDCSPVFELSPYTVNVQENLENLPKNILQVIARDDDQ 2265
Query: 131 GQNAVVYY--SVPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
G N + Y S D +++G + + LD E Q+ Y+
Sbjct: 2266 GANGQLSYMLSGGNDEGAFTLSSSGQLSLTETLDREVQEKYI 2307
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 69/166 (41%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V TD DSG+ + Y + N F++ P T E Q
Sbjct: 1305 RIGELVASVTGTDADSGQNADITYSITATNNHGT--FSISPNTGSIFLVKKLDFETQSFY 1362
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D G SS+ V I V D ND P F S+PE +V + A D
Sbjct: 1363 KLNITAKDNGRPPRSSSIPVVIHVRDFNDNPPVFTPGDIFKSIPENLPISASVMTITAQD 1422
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N ++ YS+ + IP F +D +TG I T+K +D E L+
Sbjct: 1423 TDADINGLLQYSIVQQIPRGNHFSIDPSTGLIYTSKEIDREFSNLF 1468
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 75/174 (43%), Gaps = 36/174 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G + V ATD DSG+ + Y L+ N A +F++ +E+ G +
Sbjct: 469 GSYIKGVSATDGDSGQNANLRYSLVSGN--ALGWFSI---SENSGLVTSAALLDREIASE 523
Query: 77 -------QDEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHA 125
+D+G +S T + + +TD+ND+ P F Y S+ E G + + A
Sbjct: 524 IVLNISAKDQGLQPKISYTKLI-VNITDVNDQVPTFTQSTYHVSLVEHAPAGTELVVLSA 582
Query: 126 TDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLERV 173
+D D G N + +S + P F +D +G + T LD E Q YL +
Sbjct: 583 SDDDLGANGTIRFSFDAETPASVQELFRLDVVSGRLSTAVELDREDQASYLLHI 636
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVP 141
SS A++ I V DIND P FQ Y + E G + V ATD D GQNA + YS+
Sbjct: 434 SSFASLVIFVNDINDHPPIFQETVYRVDISEDIPKGSYIKGVSATDGDSGQNANLRYSLV 493
Query: 142 EDIP---FVVDANTGDIRTNKALDYE 164
F + N+G + + LD E
Sbjct: 494 SGNALGWFSISENSGLVTSAALLDRE 519
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 60/155 (38%), Gaps = 35/155 (22%)
Query: 23 ARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL 82
A + G + Q KA+D D G G+V Y L N F++ E G I G L
Sbjct: 878 AVENWSTGHVIFQAKASDPDEGANGMVVYSLKQN---PKGLFHIH---EKHGLITLTGPL 931
Query: 83 ---------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAV 120
+S+ + + V D+ND +P F L YE + E +
Sbjct: 932 EITTSSYEIEVSASDMGVPQHTSSLILIVSVYDVNDNSPVFDQLSYEVIILESEPVNSRF 991
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDI 155
+V ATD D G N + Y + NTGD+
Sbjct: 992 FKVEATDKDSGLNGEIMYD-------IAGGNTGDV 1019
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 67/173 (38%), Gaps = 27/173 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL----------------------LDNNTDAASYFNLD 67
G +++ V ATD D G+ + Y++ LD T S++NL
Sbjct: 1936 GSSIITVGATDADDGQNAQLLYKIASGDPQGHFVITKDGVLQTKKSLDRETQ--SFYNLV 1993
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATD 127
P +STA V+I + D+ND P F S + V ATD
Sbjct: 1994 VTVNDLAP-PPITRFTSTAQVSIILLDVNDCPPTFTSQKMTYIQENTPVDTVVFTTQATD 2052
Query: 128 ADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
AD G N+ V YS+ P F + GD+R LD E+ Y V K
Sbjct: 2053 ADSGPNSYVEYSLRGPFGNKFSIGTIDGDVRLIGELDREELSNYTLTVVATDK 2105
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 67/173 (38%), Gaps = 19/173 (10%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEY----------RLLDNNTDAASYFNLD- 67
Y A ++ G + V ATD D G+ G V+Y R+ N + LD
Sbjct: 671 YFANVKENEPSGSYVTTVSATDPDLGRNGTVKYFITAGDSSKFRINSNTGKITTLVPLDR 730
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D GL S A V + V D D P F Y F + E G +G
Sbjct: 731 EEKTAYQLQVTAADGSGLRSHTPAIVTVTVIDTQDNPPVFSQKVYSFVMFENVGVGTVIG 790
Query: 122 RVHATDADEGQNAVVYYSVPEDIPFVVDANT-GDIRTNKALDYEKQQLYLERV 173
V AT D N + Y D + D N+ G I +D E+Q Y +V
Sbjct: 791 TVSATTVDLNTN-ISYLITSGDQRGLFDVNSAGQITALSQIDREEQGFYQLKV 842
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 80 GGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
G ++ A VNI V D+ND P F ++ + +V G + + A+D DEG N +V Y
Sbjct: 847 GEITGEAFVNITVKDLNDNAPHFIHTVEHVSAVENWSTGHVIFQAKASDPDEGANGMVVY 906
Query: 139 SVPED 143
S+ ++
Sbjct: 907 SLKQN 911
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 29/154 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------------------- 68
+ ++M + A D D+ GL++Y ++ ++F++DP
Sbjct: 1411 ISASVMTITAQDTDADINGLLQYSIV-QQIPRGNHFSIDPSTGLIYTSKEIDREFSNLFE 1469
Query: 69 ----ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVH 124
AT+ P+ E + V I VTD+ND P F S + P G + V
Sbjct: 1470 LTIKATDQAFPV--EFRRYALKNVTIWVTDLNDNVPTFVSQNALVAEPNIVIGSILTTVV 1527
Query: 125 ATDADEGQNAVVYYSVPE--DIPFVVDANTGDIR 156
A D D+G N V Y + E F++D +GDIR
Sbjct: 1528 AFDPDDGANGEVEYELVEGDSDTFIMDRYSGDIR 1561
>gi|21410266|gb|AAH31051.1| Cadherin 18, type 2 [Homo sapiens]
gi|61363884|gb|AAX42459.1| cadherin 18 type 2 [synthetic construct]
gi|123993751|gb|ABM84477.1| cadherin 18, type 2 [synthetic construct]
gi|123994521|gb|ABM84862.1| cadherin 18, type 2 [synthetic construct]
Length = 790
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDGEA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNTPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ I + G + K L+YEK++ Y
Sbjct: 289 KIKANDADTGSNADMTYSIINGDGMGIFSISTDKETREGILSLKKPLNYEKKKSY 343
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDGEAREHY 232
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 353 HLDFRFSHLGPFKD------ATMLKIIVGDV-DEPPLFSMPSYLMEVYENAKIGTVVGTV 405
Query: 124 HATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D + V Y Y+V +D F +DANTG IRT K LD E+ Y
Sbjct: 406 LAQDPDSINSLVRYFINYNVEDDRFFNIDANTGTIRTTKVLDREETPWY 454
Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|224045771|ref|XP_002195575.1| PREDICTED: cadherin-18-like [Taeniopygia guttata]
Length = 790
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
E+G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 EMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPED-----IPFVVDANT--GDIRTNKALDYEKQQLY 169
++ A DAD G NA + Y++ D T G + K L+YEK++ Y
Sbjct: 289 KIKANDADTGSNADMKYTIINGNGSGVFSITTDKETREGILSLKKPLNYEKKKSY 343
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE + G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSEMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 29/144 (20%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
FY + ++G + V A D D+ LV Y +D+NT+ YF +D +T G I+
Sbjct: 387 FYVMEVYENAKIGTPVGTVTAHDPDAAN-SLVRY-FIDHNTEEDRYFTIDAST---GTIK 441
Query: 78 ----------------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG- 114
D GL S V +R+ D+ND PE + Y+ + E
Sbjct: 442 TAKIFDREETPWYNITVAASEIDNPGLVSHVPVGVRILDVNDNPPEL-ARDYDVVICENT 500
Query: 115 QDGLAVGRVHATDADEGQNAVVYY 138
+ G + + ATD D+ N ++
Sbjct: 501 KPGQVIQTITATDKDDSANGARFH 524
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 68/180 (37%), Gaps = 45/180 (25%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE---------------- 71
++G + ++KA D D+G ++Y +++ N D T
Sbjct: 282 QVGSAVGKIKANDADTGSNADMKYTIINGNGSGVFSITTDKETREGILSLKKPLNYEKKK 341
Query: 72 ------------------HQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
H GP +D + + V D+ D+ P F Y V E
Sbjct: 342 SYTLNIEGANTHLDFRFSHLGPFKD------VTMLKVIVGDV-DEPPLFTMPFYVMEVYE 394
Query: 114 -GQDGLAVGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ G VG V A D D + V Y+ + ED F +DA+TG I+T K D E+ Y
Sbjct: 395 NAKIGTPVGTVTAHDPDAANSLVRYFIDHNTEEDRYFTIDASTGTIKTAKIFDREETPWY 454
Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|60654415|gb|AAX29898.1| cadherin 18 type 2 [synthetic construct]
Length = 791
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDGEA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNTPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ I + G + K L+YEK++ Y
Sbjct: 289 KIKANDADTGSNADMTYSIINGDGMGIFSISTDKETREGILSLKKPLNYEKKKSY 343
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDGEAREHY 232
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 353 HLDFRFSHLGPFKD------ATMLKIIVGDV-DEPPLFSMPSYLMEVYENAKIGTVVGTV 405
Query: 124 HATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D + V Y Y+V +D F +DANTG IRT K LD E+ Y
Sbjct: 406 LAQDPDSINSLVRYFINYNVEDDRFFNIDANTGTIRTTKVLDREETPWY 454
Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|297294043|ref|XP_001084117.2| PREDICTED: cadherin-10-like [Macaca mulatta]
Length = 798
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 176 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 234
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F V E
Sbjct: 235 PNMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESS 294
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G A+G V ATDAD G+NA V Y + + DI D G I + LDYE ++
Sbjct: 295 PVGTAIGSVKATDADTGKNAEVEYRIIDGDGTDMFDIVTEKDTQEGIITVKQPLDYESRR 354
Query: 168 LYLERV 173
LY +V
Sbjct: 355 LYTLKV 360
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 160 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 219
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 220 YFSVEPETGIIRT 232
>gi|334331086|ref|XP_003341441.1| PREDICTED: protocadherin-23-like [Monodelphis domestica]
Length = 3395
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 84/177 (47%), Gaps = 25/177 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD--NNTDAASYFNLDPATEH---- 72
Y A + G +QVKA+D D+G++G +EY L D ++++ + F +DP T H
Sbjct: 692 YNASVAEHAPSGHCFLQVKASDADTGRYGHIEYLLYDGFHSSEQSQAFQIDPHTGHICVS 751
Query: 73 ------QGPI--------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDG 117
+ P+ QD GGLS+ A V + + D+ND P F Y S+ Q G
Sbjct: 752 QDIDRERDPVTYDLLVKAQDGGGLSAQAFVRVELKDVNDNQPVFNPASYVTSISGHTQPG 811
Query: 118 LAVGRVHATDADEGQNAVVYYS-VPEDIP--FVVDANTGDIRTNKALDY-EKQQLYL 170
+ V ATD D G VV Y +P D F VDA TG I L + E ++L
Sbjct: 812 TEILNVVATDRDAGIYGVVAYELIPGDFSSLFTVDAATGIIYLISTLSHLESTSVFL 868
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 75/161 (46%), Gaps = 31/161 (19%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ------D 78
+ ATD+DSGK G + Y LL + +F ++P T EHQ Q D
Sbjct: 1237 IVATDRDSGKNGQLSYSLLSD----GKFFKMNPNTGEIINWIALDREHQVHHQLIVLVTD 1292
Query: 79 EGGLSSTATV--NIRVTDINDKNPEF-QSLP---YEFSVPEGQDG-LAVGRVHATDADEG 131
G AT+ I VTD+ND P F Q LP + V EGQ + V V A D D G
Sbjct: 1293 HGSPPQNATMITYISVTDLNDNKPYFPQFLPGKELKIKVLEGQTADMLVTTVFAKDLDSG 1352
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
N V YS+ + F +DAN+G+IRT L Y + Y
Sbjct: 1353 NNGEVLYSLSSEESSEHFKIDANSGEIRTTSPLSYNHRPHY 1393
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 25/171 (14%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ---------- 77
E+G + + A D D G+ G + Y +L N + + F LD + I
Sbjct: 1656 EIGSLVHHIVAKDPDEGRNGRITYHILSGNEN--NTFMLDEISGLLTTISPLDYETQTFH 1713
Query: 78 -------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
D+G LS+T T+ I V DIND+ P F+ YE ++ E Q G V +V A D
Sbjct: 1714 VLTLLSLDDGLPALSTTQTLTIYVLDINDEAPVFKQHLYEATIAENQGPGQYVTKVEAVD 1773
Query: 128 ADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D G N+ + + + + F +++++G++ T LD E Q+++ RV +
Sbjct: 1774 RDSGINSQLQFEIMPTAKSGLFKINSSSGEVITAATLDRETQEIFTLRVLV 1824
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 76/173 (43%), Gaps = 23/173 (13%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA-------------SYF 64
Y A + ++QV A D DS G +EY +L N D A +
Sbjct: 2269 IYQASVAEGQPFNTEIIQVFAADLDSDLNGQIEYSILSGNQDEAFQIDAVSGVIATNTIL 2328
Query: 65 NLDPATEHQGPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYE-FSVPEGQD-GL 118
+ + + + +Q D+G LSSTA V I+V D+ND P F LP E VPE G
Sbjct: 2329 DYELTSSYSLVVQAADKGISSLSSTAVVKIQVVDLNDNIPVF--LPSERVEVPESVPLGS 2386
Query: 119 AVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLY 169
+ RV A D D V +S + F +D NTG + K LDYE + Y
Sbjct: 2387 VITRVAAHDRDSSPALVFTFSNGGNPGARFAIDHNTGAVVLVKPLDYEGRHEY 2439
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 30/163 (18%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------------- 82
V A D D+G G V+Y ++ NT+ +F ++ E G + L
Sbjct: 1873 VLAVDMDTGNNGAVQYHIIGGNTE--QHFTIN---ETSGELSTTCSLDREHISNYTLIIE 1927
Query: 83 ---------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
SS + + V D ND +P F + PY V E + G + + A D D G
Sbjct: 1928 CYDLGNPSRSSMGEIKVTVLDENDHDPTFPTAPYHTWVKEDLEMGSVILELSAVDEDIGL 1987
Query: 133 NAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERV 173
N V YS+ D+ F +D G ++ ++LD E + Y+ RV
Sbjct: 1988 NGQVEYSLTGDVLGIFTIDRMAGTLKLAQSLDRETRSQYVFRV 2030
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V +RV D ND P F Y SV E G AV RVHATD D G N V YS+ P
Sbjct: 312 VEVRVLDENDNPPVFNQSEYRTSVREDAPPGTAVCRVHATDLDLGSNGQVRYSLRARQPS 371
Query: 146 ----------FVVDANTGDIRTNKALDYEKQQLY 169
F V+ +G +R + LD E Q Y
Sbjct: 372 TGGFDSEGAFFSVEELSGVVRVRRPLDREAQARY 405
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 75/180 (41%), Gaps = 32/180 (17%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEH 72
SL Y A ++ +G ++ V A D+D G V Y ++ N YF +D A +
Sbjct: 2692 SLEYHAHVKESLPVGSQIVVVSAKDQDIGANSEVVYTIISGNERG--YFCIDGETGAIDL 2749
Query: 73 QGPIQDEGGLSST---------------ATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG 117
P+ E + T +TV+I V D ND P+F VPE
Sbjct: 2750 MKPLDYEDTIMFTLTVQASNRGTDNVAFSTVSINVLDDNDHAPQFLFSSLNCVVPENLPN 2809
Query: 118 LAV-GRVHATDADEG----------QNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQ 166
+V HA D D G + ++ + +P D+ F +D TGDI K LDYE +
Sbjct: 2810 FSVMCTAHALDFDTGPYGHLTYSIQSSCLIDHGIPHDL-FFIDHLTGDIYAKKILDYESE 2868
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+STAT+ I V D ND P F SL Y V E G + V A D D G N+ V Y++
Sbjct: 2670 LNSTATILIDVLDANDNPPIFSSLEYHAHVKESLPVGSQIVVVSAKDQDIGANSEVVYTI 2729
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E F +D TG I K LDYE ++
Sbjct: 2730 ISGNERGYFCIDGETGAIDLMKPLDYEDTIMF 2761
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 24/169 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSG-------------KFGLVEYRLLDNNTDAASYF 64
Y A + G + +V+A D+DSG K GL +++ ++ + +
Sbjct: 1751 LYEATIAENQGPGQYVTKVEAVDRDSGINSQLQFEIMPTAKSGL--FKINSSSGEVITAA 1808
Query: 65 NLDPATEH----QGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
LD T+ + ++D+G LSST TV RV D ND P+F E V E Q+
Sbjct: 1809 TLDRETQEIFTLRVLVKDQGVPPLSSTTTVLCRVRDENDHAPKFIIPSPEVQVLENQEPE 1868
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
+ V A D D G N V Y + + F ++ +G++ T +LD E
Sbjct: 1869 VIYTVLAVDMDTGNNGAVQYHIIGGNTEQHFTINETSGELSTTCSLDRE 1917
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 71/171 (41%), Gaps = 34/171 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G ++ V ATD+D+G +G+V Y L+ D +S F +D AT G I
Sbjct: 811 GTEILNVVATDRDAGIYGVVAYELIPG--DFSSLFTVDAAT---GIIYLISTLSHLESTS 865
Query: 77 -------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
+D GGL+S A V I + F+ Y FS+ E + VG V A
Sbjct: 866 VFLTISARDGGGLTSMTNADVTIHILQTALAPAIFERSKYVFSIHEDMPEDSPVGTVKAR 925
Query: 127 DADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
+ V Y D F +D G IRT K LD+E Q RV L
Sbjct: 926 EPSNSLETVSYRISSGDPYGSFTIDPKFGVIRTRKQLDHETQS----RVIL 972
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 72/181 (39%), Gaps = 37/181 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL----------------------LDN 56
Y ++ E+G ++++ A D+D G G VEY L LD
Sbjct: 1961 YHTWVKEDLEMGSVILELSAVDEDIGLNGQVEYSLTGDVLGIFTIDRMAGTLKLAQSLDR 2020
Query: 57 NTDAASYFNLDPATEH-QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV---- 111
T + F + + Q P + +T V + + D+ND NP F P + V
Sbjct: 2021 ETRSQYVFRVVASDRSVQSPRR------TTVDVTVNIDDVNDNNPVFGQNPLDVFVSSQM 2074
Query: 112 PEGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYL 170
P Q + V D+D G N V +S E F +D +G++R K L E + L
Sbjct: 2075 PVNQ---TIATVVGYDSDLGLNGAVVFSFAETQSMFHIDERSGEVRLQKHLSSEHFPVCL 2131
Query: 171 E 171
+
Sbjct: 2132 Q 2132
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---P 141
T T + + D+ND +P F S + + + G V + A D DEG+N + Y +
Sbjct: 1626 TMTAKVVILDVNDHSPSFVSSAITYISEDEEIGSLVHHIVAKDPDEGRNGRITYHILSGN 1685
Query: 142 EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
E+ F++D +G + T LDYE Q ++
Sbjct: 1686 ENNTFMLDEISGLLTTISPLDYETQTFHV 1714
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 59/132 (44%), Gaps = 17/132 (12%)
Query: 45 KFGLVEYR-LLDNNTDAASYFNLDPATEHQGPIQDEGGLS---STATVNIRVTDINDKNP 100
KFG++ R LD+ T + IQ + G S S+ VNI V D+ND P
Sbjct: 952 KFGVIRTRKQLDHETQSRVILT----------IQSQLGSSPVYSSTQVNITVIDVNDNPP 1001
Query: 101 EFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRT 157
F + E + + G A+ HA D D QN V Y++ F +D++TG I
Sbjct: 1002 IFHAASDEVRLLQSTLPGTALYIAHAEDKDSDQNGYVQYTIENQRSSIFSIDSDTGVIYL 1061
Query: 158 NKALDYEKQQLY 169
+ L E QQ +
Sbjct: 1062 SGTLGQEMQQSW 1073
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 69 ATEHQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHA 125
A E Q +D G LSST +++ + D+ND P FQ Y SV E G +V A
Sbjct: 652 AVELQIEARDLGHPPLSSTCWLSLTIEDVNDNEPVFQRQVYNASVAEHAPSGHCFLQVKA 711
Query: 126 TDADEGQNAVV-------YYSVPEDIPFVVDANTGDIRTNKALDYEK 165
+DAD G+ + ++S + F +D +TG I ++ +D E+
Sbjct: 712 SDADTGRYGHIEYLLYDGFHSSEQSQAFQIDPHTGHICVSQDIDRER 758
Score = 42.7 bits (99), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 51/108 (47%), Gaps = 22/108 (20%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE--GQNAVVYY 138
LS+ + +RVTD+ND+ P F Y SV E G AV R+ A+D DE +A V Y
Sbjct: 544 LSTQEILLLRVTDVNDQAPHFSQERYYASVSEAAAPGTAVLRLSASDGDEPGTDHARVRY 603
Query: 139 S----------VPED---------IPFVVDANTGDIRTNKALDYEKQQ 167
+ +PE+ + F VD +G I T LD E Q+
Sbjct: 604 ALAQVQPSNGCIPEEAVSGARCPPLAFAVDPESGVISTIGTLDREVQE 651
Score = 42.4 bits (98), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 11/99 (11%)
Query: 85 TATVNIRVTDINDKNPEF-QSLPY----EFSVPEGQDGLAVGRVHATDADEGQNAVVYYS 139
+AT+ + V D ND P F + + E +P+G +G + ATD D G+N + YS
Sbjct: 1198 SATITVHVLDENDNCPTFLHDVLFLQVEENPIPQG----VIGTIVATDRDSGKNGQLSYS 1253
Query: 140 VPEDIPFV-VDANTGDIRTNKALDYEKQQLYLERVFLIS 177
+ D F ++ NTG+I ALD E Q++ + + L++
Sbjct: 1254 LLSDGKFFKMNPNTGEIINWIALDRE-HQVHHQLIVLVT 1291
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAV 135
+D+G +T V + V I++ P F Y FS+PE +G+V A+DAD G + +
Sbjct: 2878 EDKGEAKATLMVQVDVEGIDEYEPIFTQDHYFFSLPESHHVRQVIGKVEASDADAGVDGL 2937
Query: 136 VYYSVPE-DIPFVVDANTGDI 155
V Y++ I F ++ +G +
Sbjct: 2938 VLYTLANPSIFFSINKTSGHV 2958
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV 140
L A ++I+V ++ + + +PE + + + + D + N V+ ++
Sbjct: 1407 LQGQAVIHIQVIPLSKERSSVSGYIHHLVIPENFKPAKVMSLIKSPDYLQQHNGVLQLNI 1466
Query: 141 PE---DIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
E DI F V+++TGD+ ++ LDYE YL RV
Sbjct: 1467 VEEDKDIHFEVESSTGDLFLSRELDYEMTSHYLLRVM 1503
Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 16/112 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN------NTDAASYFNLDPA-- 69
FY + +G ++ V ATD+D+G G + Y++L + S F + P
Sbjct: 2474 FYQVTLPEITPIGSRILTVLATDQDTGNNGEISYKILSTGEGFSIDPQNGSIFTVKPVLL 2533
Query: 70 TEHQGPIQ------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
IQ D G GL++ V I + D+N+ P+F Y +V E
Sbjct: 2534 LNKTSTIQLLVEAKDGGIPGLTALTLVEIEIQDVNNHAPQFTMDHYNITVSE 2585
>gi|153792706|ref|NP_899044.3| protocadherin Fat 4 precursor [Mus musculus]
gi|341940688|sp|Q2PZL6.2|FAT4_MOUSE RecName: Full=Protocadherin Fat 4; AltName: Full=FAT tumor suppressor
homolog 4; AltName: Full=Fat-like cadherin protein FAT-J;
Flags: Precursor
Length = 4981
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 75/164 (45%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y L+ D+ F +DP + EH+
Sbjct: 1756 GSKIMQLTAMDADEGANALVTYALISGADDS---FRIDPESGDLIATKRLDREHRSKYSL 1812
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G SS +NI ++D+ND P F Y F +PE G V + ATD D G
Sbjct: 1813 LVRADDGLQSSDMRINITISDVNDHTPRFSRPVYSFDIPEDTTPGSLVAAILATDDDSGV 1872
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG +ALDYE QQ Y+ V
Sbjct: 1873 NGEISYVVEEDDGDGVFFLNLVTGVFNLTRALDYETQQYYILTV 1916
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 26/172 (15%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL+ Y ++ N + A + +
Sbjct: 3098 ATIPESHSIGSVVRTVSARDRDTAMNGLISYNIISGNEEGIFAINSSTGVVTLAKALDYE 3157
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEF---SVPEGQDGLAV 120
+++H+ I D G ++ T ++ + V D+ND +P F +P EF + G V
Sbjct: 3158 MSSKHEMTISATDGGWVARTGYCSLTVSVIDVNDNSPVF--VPDEFFPTVMENAPSGTTV 3215
Query: 121 GRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y+V D+ FV+D N G I T LD+E +Q Y
Sbjct: 3216 IHLNATDADSGANAVIAYTVQSSDSDL-FVIDPNMGVITTQGFLDFETKQSY 3266
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 22/161 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V ATDKDSG G ++Y +++ N +++ F ++ AT I+
Sbjct: 2689 ILTVSATDKDSGPNGQLDYEIVNGNQESS--FTINHATGEIRSIRPLDREKISHYELTVK 2746
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQN 133
D+G S + +V I + D ND P F + + G V RV +D D G N
Sbjct: 2747 SSDKGSPSQSTSVKVIISILDENDNAPRFSQIFSAYVSENSPLGYTVTRVTTSDEDIGIN 2806
Query: 134 AVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
A+ YS+ + +PF ++ NTGDI ++ L+ E Y RV
Sbjct: 2807 AISRYSIVDTSLPFTINPNTGDIVISRPLNREDTDRYRIRV 2847
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 76/171 (44%), Gaps = 33/171 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------------------- 68
G L+ + ATD+D G G V + L + D F LDP
Sbjct: 599 GTELLVLGATDRDLGDNGTVRFSLQEAENDQ-RLFRLDPVSGRLSTASSLDREEQAFYCL 657
Query: 69 ---ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVH 124
AT+ P Q SSTA VN+ + DIND +P F + Y + E + G + V V
Sbjct: 658 SILATDLGSPPQ-----SSTAQVNVSLLDINDNSPVFYPVQYFAHIQENEPGGSYVTTVS 712
Query: 125 ATDADEGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
ATD D G N V YS+ + F + A +G I T ALD E++ Y +V
Sbjct: 713 ATDPDMGPNGTVKYSISAGDRSRFQIHAKSGVISTKMALDREEKTAYQLQV 763
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 22/168 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y ++D + F ++P T
Sbjct: 2776 SQIFSAYVSENSPLGYTVTRVTTSDEDIGINAISRYSIVDTSLP----FTINPNTGDIVI 2831
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
P+ E G + + V I VTDIND P F Y PE + G
Sbjct: 2832 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNTPRFSRPSYYLDCPELPELGS 2891
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
V +V ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 2892 RVTQVSATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQVLKYQN 2939
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 73/169 (43%), Gaps = 18/169 (10%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYF---NLDPAT 70
D + Y + + +V+A+DKDSG G + Y + D NN DA F L +
Sbjct: 997 DQISYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTITDGNNGDAFGIFPDGQLYIKS 1056
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E +QD LS+T V + + D+ND P F S Y F E Q G
Sbjct: 1057 ELDRELQDRYVLLVVASDRAVEPLSATVNVTVLLEDVNDNRPLFNSTNYTFYFEEEQRAG 1116
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
VG+V A D D G N V Y+ P F + A TG+I + D E
Sbjct: 1117 SFVGKVSAVDKDFGPNGEVRYAFEVTQPNFELHAVTGEITSTHKFDRES 1165
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 38 ATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGGLSSTAT--- 87
ATD D G G+ YR++ N A F LD G + +GGL T
Sbjct: 159 ATDSDIGSNGVDHHSYRIVSGN--EAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQY 216
Query: 88 -------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
VN+ V DIND P F S Y+ VPE G +V +V A D
Sbjct: 217 QLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAAD 276
Query: 128 ADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ADEG NA + Y + E PF +D TG I + LD+E ++ Y
Sbjct: 277 ADEGTNADIRYRLQDEGTPFQMDPETGLITVREPLDFEARRQY 319
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 76/173 (43%), Gaps = 21/173 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYF 64
FY A + +++V A+D D G GL+ Y +L N +
Sbjct: 1214 FYQATVSETATNLTQVLRVSASDVDEGSNGLIHYSILKGNEERQFAIDSFSGQVTLVGKL 1273
Query: 65 NLDPATEHQGPIQ--DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
+ + + + IQ D G L+ST T++I + D ND P F V E + G
Sbjct: 1274 DYEATSAYSLLIQAVDSGAIPLNSTCTLSIDILDENDNTPSFPKSTLFVDVLENMRIGEL 1333
Query: 120 VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD+D G NA ++Y++ F + NTG I K LD+E Q LY
Sbjct: 1334 VSSVTATDSDSGVNADLHYTITGSNNHGTFSISPNTGSIFLAKKLDFETQSLY 1386
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 68/157 (43%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +ATD DSG +EY LL+ + + S +D G + D
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNPSGNKFSIGTIDGEVHLTGELDREEVSNYSLTVVATD 2128
Query: 79 EGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y + E G + +V A D DEG N
Sbjct: 2129 KGQPPLSSSTEVVVMVLDINDNNPVFAQAMYRVQIKENILTGTDIIQVSAADNDEGTNGQ 2188
Query: 136 VYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y + F +D+ TG I K+LD E Y
Sbjct: 2189 VRYGIVGGNTHQEFRIDSVTGAITVAKSLDRETTPAY 2225
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 77/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP + G I +G L
Sbjct: 3212 GTTVIHLNATDADSGANAVIAYTVQSSDSD---LFVIDP---NMGVITTQGFLDFETKQS 3265
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
S ATV+I++ N+ P F S Y F V E G AVG V A+
Sbjct: 3266 YHLTVKAFNVPDEEKCSFATVDIQLKGTNEYVPRFVSKLYYFEVSEAASRGTAVGEVFAS 3325
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F ++ TG I + LD EK+ ERV L
Sbjct: 3326 DRDMGADGEVHYLIFGNSRKKGFQINKMTGQIYVSGLLDREKE----ERVSL 3373
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L ATV++ + DIND P+F Y+ +V E L V RV A+D DEG N +++YS+
Sbjct: 1190 LKDQATVHVYMKDINDNAPKFLKDFYQATVSETATNLTQVLRVSASDVDEGSNGLIHYSI 1249
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E+ F +D+ +G + LDYE Y
Sbjct: 1250 LKGNEERQFAIDSFSGQVTLVGKLDYEATSAY 1281
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 78/177 (44%), Gaps = 27/177 (15%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD---------- 67
Y ++ G ++QV A D D G G V Y ++ NT F +D
Sbjct: 2158 MYRVQIKENILTGTDIIQVSAADNDEGTNGQVRYGIVGGNTHQE--FRIDSVTGAITVAK 2215
Query: 68 -------PATEHQGPIQDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
PA D G T TV I + D+ND P F+ PY +VPE L
Sbjct: 2216 SLDRETTPAYTLTVQATDRGSSPRTDSCTVAITLLDMNDFVPVFELSPYSVNVPENLGTL 2275
Query: 119 --AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
A+ +V A D D+G N+ + Y + ED FV+ A +G++R ++LD E + ++
Sbjct: 2276 PRAILQVVARDDDQGPNSQLSYVLLGGNEDNAFVLTA-SGELRVTQSLDREARDHFV 2331
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 73/159 (45%), Gaps = 20/159 (12%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY-------FNLDPATEHQGP------- 75
G + + ATD DSG G + Y + +++ D + FNL A +++
Sbjct: 1857 GSLVAAILATDDDSGVNGEISYVVEEDDGDGVFFLNLVTGVFNLTRALDYETQQYYILTV 1916
Query: 76 -IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
+D GG S+T + D+ND P F Y S+ E G V + TDAD+G N
Sbjct: 1917 RAEDGGGQSTTIRAYFNILDVNDNPPVFSMSSYSTSLMENLPLGSTVLVFNVTDADDGVN 1976
Query: 134 AVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ + YS+ F VD + G ++T KALD E Q Y
Sbjct: 1977 SQLSYSIASGDSLGQFAVDKH-GVLKTLKALDRESQSFY 2014
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 77/159 (48%), Gaps = 22/159 (13%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQGPI 76
++G L++V A D KD G VEY + LDN+T S + + +Q +
Sbjct: 2999 KVGTKLIKVTAVDDKDFGLNSEVEYFVSDGNHLGKFKLDNDTGWISIASSLVSDLNQNFL 3058
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D+G LSS A V+I VT+ N PEF ++PE G V V A D
Sbjct: 3059 IRVTAKDKGNPPLSSQAVVHITVTEENYHTPEFSQNHISATIPESHSIGSVVRTVSARDR 3118
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
D N ++ Y++ E+ F ++++TG + KALDYE
Sbjct: 3119 DTAMNGLISYNIISGNEEGIFAINSSTGVVTLAKALDYE 3157
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1724 AEVEITLQDINDNPPVFPTDTLDLTVEENIGDGSKIMQLTAMDADEGANALVTYALISGA 1783
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ K LD E + Y
Sbjct: 1784 DDSFRIDPESGDLIATKRLDREHRSKY 1810
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV- 140
SS ++I V DIND P F+ P+ + E + V ATD D G N + Y +
Sbjct: 2651 FSSYEKLDITVLDINDNAPTFEEDPFVSEILENLSPRKILTVSATDKDSGPNGQLDYEIV 2710
Query: 141 --PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ F ++ TG+IR+ + LD EK Y
Sbjct: 2711 NGNQESSFTINHATGEIRSIRPLDREKISHY 2741
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 67/173 (38%), Gaps = 32/173 (18%)
Query: 23 ARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPATEHQGP 75
A + + G ++ Q KA D D G G V Y L N N + L H G
Sbjct: 902 AVENWQAGHSIFQAKAVDPDEGVNGRVLYSLKQNPKNLFTINEQNGNISLLGALDVHAGS 961
Query: 76 IQDE--------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
Q E LSS+ + + V D+ND P F + YE ++ E + +V A+
Sbjct: 962 YQVEIVASDMGVPQLSSSILLTVYVHDVNDNPPVFDQISYEVTLSESEPVNSRFFKVQAS 1021
Query: 127 DADEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYL 170
D D G N + Y+ + D N GD + LD E Q Y+
Sbjct: 1022 DKDSGANGEIAYT-------ITDGNNGDAFGIFPDGQLYIKSELDRELQDRYV 1067
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
G ++ VNI V D+ND P F Q++ +V Q G ++ + A D DEG N V Y
Sbjct: 871 GAVTGDTVVNITVKDLNDNAPHFLQAVESINAVENWQAGHSIFQAKAVDPDEGVNGRVLY 930
Query: 139 SV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
S+ P+++ F ++ G+I ALD +E V
Sbjct: 931 SLKQNPKNL-FTINEQNGNISLLGALDVHAGSYQVEIV 967
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 75/155 (48%), Gaps = 18/155 (11%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYF----------NLD-PATEHQGPI---QD 78
++QV A D D G + Y LL N D A +LD A +H + D
Sbjct: 2279 ILQVVARDDDQGPNSQLSYVLLGGNEDNAFVLTASGELRVTQSLDREARDHFVLVVTAAD 2338
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAV 135
G L+ T T+NI V DIND P F + Y S+ E + G V V+A+DAD NAV
Sbjct: 2339 AGSPALTGTGTINIIVDDINDNVPTFANNMYLTSIAEDARTGTDVLLVNASDADAAANAV 2398
Query: 136 VYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ YS + + F ++ +TG I T+ LD E + Y
Sbjct: 2399 ISYSIIGGNSQFTINPSTGQIITSALLDRETKDNY 2433
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 67/160 (41%), Gaps = 27/160 (16%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH 72
+ DSL G A DKH + L +KA D++S F Y L+ H
Sbjct: 1985 SGDSL--GQFAVDKHGV---LKTLKALDRESQSF----YNLV--------------IQVH 2021
Query: 73 QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
P +STA V+I + D+ND P F S P +PE V + ATD D G
Sbjct: 2022 DLPQPPTSRFTSTAQVSIILLDVNDNPPMFLS-PKLTYIPENTPIDTVVFKAQATDPDSG 2080
Query: 132 QNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
N+ + Y++ P F + G++ LD E+ Y
Sbjct: 2081 PNSYIEYTLLNPSGNKFSIGTIDGEVHLTGELDREEVSNY 2120
Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N V Y + +
Sbjct: 1515 VTILVTDLNDNVPMFISQNALAADPSAMIGSVLTTIMAADPDEGANGEVEYEILNGDTDT 1574
Query: 146 FVVDANTGDIRTNKAL 161
F VD +GD+R AL
Sbjct: 1575 FTVDRYSGDLRVASAL 1590
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 69/166 (41%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG + Y + +N F++ P T E Q
Sbjct: 1329 RIGELVSSVTATDSDSGVNADLHYTITGSNNHGT--FSISPNTGSIFLAKKLDFETQSLY 1386
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G SST +V I+V D ND P F S+ E G +V V A D
Sbjct: 1387 KLNITAKDQGRPPRSSTMSVVIQVRDFNDNPPSFPPGDIFKSIVENIPLGTSVISVTAHD 1446
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + Y++ + +P F +D G I T+ +D E L+
Sbjct: 1447 PDADINGQLSYAIIQQMPRGNHFSIDEVKGTIYTSAEIDREFANLF 1492
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 92 VTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
+TD+ND P FQ PY +P G V V TDAD G N+ ++YS+
Sbjct: 2458 ITDVNDNPPRFQHHPYVTHIPSPTPPGSFVFAVTVTDADIGSNSELHYSL 2507
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 75 PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQN 133
P + SS A++ I V DIND P F+ Y ++ E G V V ATD D G N
Sbjct: 448 PTAEVQARSSVASLVIFVNDINDHPPVFEQQVYRVNLSEEVPPGSYVSGVSATDGDSGLN 507
Query: 134 AVVYYSV 140
A + YS+
Sbjct: 508 ANLRYSI 514
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 69/175 (39%), Gaps = 22/175 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G V+Y + + ++ LD
Sbjct: 694 YFAHIQENEPGGSYVTTVSATDPDMGPNGTVKYSISAGDRSRFQIHAKSGVISTKMALDR 753
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V + V D D P F Y F V E G VG
Sbjct: 754 EEKTAYQLQVVATDGGNLQSPNQAIVTVTVLDTQDNPPVFSQAAYSFVVFENVALGYHVG 813
Query: 122 RVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V AT D NA + Y + + F ++ TG + T +D E+Q Y ++
Sbjct: 814 SVSATTMD--LNANISYLITTGDQRGMFAMNPVTGQLTTASVIDREEQSFYQLKI 866
>gi|82659759|gb|ABB88946.1| Fat4 [Mus musculus]
Length = 4981
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 75/164 (45%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y L+ D+ F +DP + EH+
Sbjct: 1756 GSKIMQLTAMDADEGANALVTYALISGADDS---FRIDPESGDLIATKRLDREHRSKYSL 1812
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G SS +NI ++D+ND P F Y F +PE G V + ATD D G
Sbjct: 1813 LVRADDGLQSSDMRINITISDVNDHTPRFSRPVYSFDIPEDTTPGSLVAAILATDDDSGV 1872
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG +ALDYE QQ Y+ V
Sbjct: 1873 NGEISYVVEEDDGDGVFFLNLVTGVFNLTRALDYETQQYYILTV 1916
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 26/172 (15%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL+ Y ++ N + A + +
Sbjct: 3098 ATIPESHSIGSVVRTVSARDRDTAMNGLISYNIISGNEEGIFAINSSTGVVTLAKALDYE 3157
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEF---SVPEGQDGLAV 120
+++H+ I D G ++ T ++ + V D+ND +P F +P EF + G V
Sbjct: 3158 MSSKHEMTISATDGGWVARTGYCSLTVSVIDVNDNSPVF--VPDEFFPTVMENAPSGTTV 3215
Query: 121 GRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y+V D+ FV+D N G I T LD+E +Q Y
Sbjct: 3216 IHLNATDADSGANAVIAYTVQSSDSDL-FVIDPNMGVITTQGFLDFETKQSY 3266
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 22/161 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V ATDKDSG G ++Y +++ N +++ F ++ AT I+
Sbjct: 2689 ILTVSATDKDSGPNGQLDYEIVNGNQESS--FTINHATGEIRSIRPLDREKISHYELTVK 2746
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQN 133
D+G S + +V I + D ND P F + + G V RV +D D G N
Sbjct: 2747 SSDKGSPSQSTSVKVIISILDENDNAPRFSQIFSAYVSENSPLGYTVTRVTTSDEDIGIN 2806
Query: 134 AVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
A+ YS+ + +PF ++ NTGDI ++ L+ E Y RV
Sbjct: 2807 AISRYSIVDTSLPFTINPNTGDIVISRPLNREDTDRYRIRV 2847
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 76/171 (44%), Gaps = 33/171 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------------------- 68
G L+ + ATD+D G G V + L + D F LDP
Sbjct: 599 GTELLVLGATDRDLGDNGTVRFSLQEAENDQ-RLFRLDPVSGRLSTASSLDREEQAFYCL 657
Query: 69 ---ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVH 124
AT+ P Q SSTA VN+ + DIND +P F + Y + E + G + V V
Sbjct: 658 SILATDLGSPPQ-----SSTAQVNVSLLDINDNSPVFYPVQYFAHIQENEPGGSYVTTVS 712
Query: 125 ATDADEGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
ATD D G N V YS+ + F + A +G I T ALD E++ Y +V
Sbjct: 713 ATDPDMGPNGTVKYSISAGDRSRFQIHAKSGVISTKMALDREEKTAYQLQV 763
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 22/168 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y ++D + F ++P T
Sbjct: 2776 SQIFSAYVSENSPLGYTVTRVTTSDEDIGINAISRYSIVDTSLP----FTINPNTGDIVI 2831
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
P+ E G + + V I VTDIND P F Y PE + G
Sbjct: 2832 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNTPRFSRPSYYLDCPELPELGS 2891
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
V +V ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 2892 RVTQVSATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQVLKYQN 2939
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 73/169 (43%), Gaps = 18/169 (10%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYF---NLDPAT 70
D + Y + + +V+A+DKDSG G + Y + D NN DA F L +
Sbjct: 997 DQISYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTITDGNNGDAFGIFPDGQLYIKS 1056
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E +QD LS+T V + + D+ND P F S Y F E Q G
Sbjct: 1057 ELDRELQDRYVLLVVASDRAVEPLSATVNVTVLLEDVNDNRPLFNSTNYTFYFEEEQRAG 1116
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
VG+V A D D G N V Y+ P F + A TG+I + D E
Sbjct: 1117 SFVGKVSAVDKDFGPNGEVRYAFEVTQPNFELHAVTGEITSTHKFDRES 1165
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 38 ATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGGLSSTAT--- 87
ATD D G G+ YR++ N A F LD G + +GGL T
Sbjct: 159 ATDSDIGSNGVDHHSYRIVSGN--EAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQY 216
Query: 88 -------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
VN+ V DIND P F S Y+ VPE G +V +V A D
Sbjct: 217 QLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAAD 276
Query: 128 ADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ADEG NA + Y + E PF +D TG I + LD+E ++ Y
Sbjct: 277 ADEGTNADIRYRLQDEGTPFQMDPETGLITVREPLDFEARRQY 319
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 76/173 (43%), Gaps = 21/173 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYF 64
FY A + +++V A+D D G GL+ Y +L N +
Sbjct: 1214 FYQATVSETATNLTQVLRVSASDVDEGSNGLIHYSILKGNEERQFAIDSFSGQVTLVGKL 1273
Query: 65 NLDPATEHQGPIQ--DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
+ + + + IQ D G L+ST T++I + D ND P F V E + G
Sbjct: 1274 DYEATSAYSLLIQAVDSGAIPLNSTCTLSIDILDENDNTPSFPKSTLFVDVLENMRIGEL 1333
Query: 120 VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD+D G NA ++Y++ F + NTG I K LD+E Q LY
Sbjct: 1334 VSSVTATDSDSGVNADLHYTITGSNNHGTFSISPNTGSIFLAKKLDFETQSLY 1386
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 68/157 (43%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +ATD DSG +EY LL+ + + S +D G + D
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNPSGNKFSIGTIDGEVHLTGELDREEVSNYSLTVVATD 2128
Query: 79 EGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y + E G + +V A D DEG N
Sbjct: 2129 KGQPPLSSSTEVVVMVLDINDNNPVFAQAMYRVQIKENILTGTDIIQVSAADNDEGTNGQ 2188
Query: 136 VYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y + F +D+ TG I K+LD E Y
Sbjct: 2189 VRYGIVGGNTHQEFRIDSVTGAITVAKSLDRETTPAY 2225
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 77/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP + G I +G L
Sbjct: 3212 GTTVIHLNATDADSGANAVIAYTVQSSDSD---LFVIDP---NMGVITTQGFLDFETKQS 3265
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
S ATV+I++ N+ P F S Y F V E G AVG V A+
Sbjct: 3266 YHLTVKAFNVPDEEKCSFATVDIQLKGTNEYVPRFVSKLYYFEVSEAASRGTAVGEVFAS 3325
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F ++ TG I + LD EK+ ERV L
Sbjct: 3326 DRDMGADGEVHYLIFGNSRKKGFQINKMTGQIYVSGLLDREKE----ERVSL 3373
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L ATV++ + DIND P+F Y+ +V E L V RV A+D DEG N +++YS+
Sbjct: 1190 LKDQATVHVYMKDINDNAPKFLKDFYQATVSETATNLTQVLRVSASDVDEGSNGLIHYSI 1249
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E+ F +D+ +G + LDYE Y
Sbjct: 1250 LKGNEERQFAIDSFSGQVTLVGKLDYEATSAY 1281
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 78/177 (44%), Gaps = 27/177 (15%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD---------- 67
Y ++ G ++QV A D D G G V Y ++ NT F +D
Sbjct: 2158 MYRVQIKENILTGTDIIQVSAADNDEGTNGQVRYGIVGGNTHQE--FRIDSVTGAITVAK 2215
Query: 68 -------PATEHQGPIQDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
PA D G T TV I + D+ND P F+ PY +VPE L
Sbjct: 2216 SLDRETTPAYTLTVQATDRGSSPRTDSCTVAITLLDMNDFVPVFELSPYSVNVPENLGTL 2275
Query: 119 --AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
A+ +V A D D+G N+ + Y + ED FV+ A +G++R ++LD E + ++
Sbjct: 2276 PRAILQVVARDDDQGPNSQLSYVLLGGNEDNAFVLTA-SGELRVTQSLDREARDHFV 2331
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 73/159 (45%), Gaps = 20/159 (12%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY-------FNLDPATEHQGP------- 75
G + + ATD DSG G + Y + +++ D + FNL A +++
Sbjct: 1857 GSLVAAILATDDDSGVNGEISYVVEEDDGDGVFFLNLVTGVFNLTRALDYETQQYYILTV 1916
Query: 76 -IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
+D GG S+T + D+ND P F Y S+ E G V + TDAD+G N
Sbjct: 1917 RAEDGGGQSTTIRAYFNILDVNDNPPVFSMSSYSTSLMENLPLGSTVLVFNVTDADDGVN 1976
Query: 134 AVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ + YS+ F VD + G ++T KALD E Q Y
Sbjct: 1977 SQLSYSIASGDSLGQFAVDKH-GVLKTLKALDRESQSFY 2014
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 77/159 (48%), Gaps = 22/159 (13%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQGPI 76
++G L++V A D KD G VEY + LDN+T S + + +Q +
Sbjct: 2999 KVGTKLIKVTAVDDKDFGLNSEVEYFVSDGNHLGKFKLDNDTGWISIASSLVSDLNQNFL 3058
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D+G LSS A V+I VT+ N PEF ++PE G V V A D
Sbjct: 3059 IRVTAKDKGNPPLSSQAVVHITVTEENYHTPEFSQNHISATIPESHSIGSVVRTVSARDR 3118
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
D N ++ Y++ E+ F ++++TG + KALDYE
Sbjct: 3119 DTAMNGLISYNIISGNEEGIFAINSSTGVVTLAKALDYE 3157
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1724 AEVEITLQDINDNPPVFPTDTLDLTVEENIGDGSKIMQLTAMDADEGANALVTYALISGA 1783
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ K LD E + Y
Sbjct: 1784 DDSFRIDPESGDLIATKRLDREHRSKY 1810
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV- 140
SS ++I V DIND P F+ P+ + E + V ATD D G N + Y +
Sbjct: 2651 FSSYEKLDITVLDINDNAPTFEEDPFVSEILENLSPRKILTVSATDKDSGPNGQLDYEIV 2710
Query: 141 --PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ F ++ TG+IR+ + LD EK Y
Sbjct: 2711 NGNQESSFTINHATGEIRSIRPLDREKISHY 2741
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 67/173 (38%), Gaps = 32/173 (18%)
Query: 23 ARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPATEHQGP 75
A + + G ++ Q KA D D G G V Y L N N + L H G
Sbjct: 902 AVENWQAGHSIFQAKAVDPDEGVNGRVLYSLKQNPKNLFTINEQNGNISLLGALDVHAGS 961
Query: 76 IQDE--------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
Q E LSS+ + + V D+ND P F + YE ++ E + +V A+
Sbjct: 962 YQVEIVASDMGVPQLSSSILLTVYVHDVNDNPPVFDQISYEVTLSESEPVNSRFFKVQAS 1021
Query: 127 DADEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYL 170
D D G N + Y+ + D N GD + LD E Q Y+
Sbjct: 1022 DKDSGANGEIAYT-------ITDGNNGDAFGIFPDGQLYIKSELDRELQDRYV 1067
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
G ++ VNI V D+ND P F Q++ +V Q G ++ + A D DEG N V Y
Sbjct: 871 GAVTGDTVVNITVKDLNDNAPHFLQAVESINAVENWQAGHSIFQAKAVDPDEGVNGRVLY 930
Query: 139 SV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
S+ P+++ F ++ G+I ALD +E V
Sbjct: 931 SLKQNPKNL-FTINEQNGNISLLGALDVHAGSYQVEIV 967
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 75/155 (48%), Gaps = 18/155 (11%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYF----------NLD-PATEHQGPI---QD 78
++QV A D D G + Y LL N D A +LD A +H + D
Sbjct: 2279 ILQVVARDDDQGPNSQLSYVLLGGNEDNAFVLTASGELRVTQSLDREARDHFVLVVTAAD 2338
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAV 135
G L+ T T+NI V DIND P F + Y S+ E + G V V+A+DAD NAV
Sbjct: 2339 AGSPALTGTGTINIIVDDINDNVPTFANNMYLTSIAEDARTGTDVLLVNASDADAAANAV 2398
Query: 136 VYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ YS + + F ++ +TG I T+ LD E + Y
Sbjct: 2399 ISYSIIGGNSQFTINPSTGQIITSALLDRETKDNY 2433
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 67/160 (41%), Gaps = 27/160 (16%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH 72
+ DSL G A DKH + L +KA D++S F Y L+ H
Sbjct: 1985 SGDSL--GQFAVDKHGV---LKTLKALDRESQSF----YNLV--------------IQVH 2021
Query: 73 QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
P +STA V+I + D+ND P F S P +PE V + ATD D G
Sbjct: 2022 DLPQPPTSRFTSTAQVSIILLDVNDNPPMFLS-PKLTYIPENTPIDTVVFKAQATDPDSG 2080
Query: 132 QNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
N+ + Y++ P F + G++ LD E+ Y
Sbjct: 2081 PNSYIEYTLLNPSGNKFSIGTIDGEVHLTGELDREEVSNY 2120
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 69/166 (41%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG + Y + +N F++ P T E Q
Sbjct: 1329 RIGELVSSVTATDSDSGVNADLHYTITGSNNHGT--FSISPNTGSIFLAKKLDFETQSLY 1386
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G SST +V I+V D ND P F S+ E G +V V A D
Sbjct: 1387 KLNITAKDQGRPPRSSTMSVVIQVRDFNDNPPSFPPGDIFKSIVENIPLGTSVISVTAHD 1446
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + Y++ + +P F +D G I TN +D E L+
Sbjct: 1447 PDADINGQLSYAIIQQMPRGNHFSIDEVKGTIYTNAEIDREFANLF 1492
Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N V Y + +
Sbjct: 1515 VTILVTDLNDNVPMFISQNALAADPSAMIGSVLTTIMAADPDEGANGEVEYEILNGDTDT 1574
Query: 146 FVVDANTGDIRTNKAL 161
F VD +GD+R AL
Sbjct: 1575 FTVDRYSGDLRVASAL 1590
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 92 VTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
+TD+ND P FQ PY +P G V V TDAD G N+ ++YS+
Sbjct: 2458 ITDVNDNPPRFQHHPYVTHIPSPTPPGSFVFAVTVTDADIGSNSELHYSL 2507
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 75 PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQN 133
P + SS A++ I V DIND P F+ Y ++ E G V V ATD D G N
Sbjct: 448 PTAEVQARSSVASLVIFVNDINDHPPVFEQQVYRVNLSEEVPPGSYVSGVSATDGDSGLN 507
Query: 134 AVVYYSV 140
A + YS+
Sbjct: 508 ANLRYSI 514
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 69/175 (39%), Gaps = 22/175 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G V+Y + + ++ LD
Sbjct: 694 YFAHIQENEPGGSYVTTVSATDPDMGPNGTVKYSISAGDRSRFQIHAKSGVISTKMALDR 753
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V + V D D P F Y F V E G VG
Sbjct: 754 EEKTAYQLQVVATDGGNLQSPNQAIVTVTVLDTQDNPPVFSQAAYSFVVFENVALGYHVG 813
Query: 122 RVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V AT D NA + Y + + F ++ TG + T +D E+Q Y ++
Sbjct: 814 SVSATTMD--LNANISYLITTGDQRGMFAMNPVTGQLTTASVIDREEQSFYQLKI 866
>gi|363730633|ref|XP_426046.3| PREDICTED: LOW QUALITY PROTEIN: cadherin-18 [Gallus gallus]
Length = 790
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
E+G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 EMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + Y++ I + G + K L+YEK++ Y
Sbjct: 289 KIKANDADTGSNADMKYTIINGDGAGVFSISTDKETREGILSLKKPLNYEKKKSY 343
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE + G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSEMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 72/182 (39%), Gaps = 49/182 (26%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF----------------------- 64
++G + ++KA D D+G ++Y ++ N D A F
Sbjct: 282 QVGSAVGKIKANDADTGSNADMKYTII--NGDGAGVFSISTDKETREGILSLKKPLNYEK 339
Query: 65 -------------NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
+LD H GP +D + I V D+ D+ P F Y V
Sbjct: 340 KKSYTLNIEGANTHLDFRFSHLGPFKD------VTMLKIIVGDV-DEPPLFTMPSYVMEV 392
Query: 112 PE-GQDGLAVGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQ 167
E + G AVG V A D D + V Y+ + ED F +DANTG I+T K D E+
Sbjct: 393 YENAKIGTAVGTVTAQDPDTANSLVRYFIDHNTEEDRYFTIDANTGTIKTAKIFDREETP 452
Query: 168 LY 169
Y
Sbjct: 453 WY 454
Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 56/134 (41%), Gaps = 29/134 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ---------- 77
++G + V A D D+ LV Y +D+NT+ YF +D T G I+
Sbjct: 397 KIGTAVGTVTAQDPDTAN-SLVRY-FIDHNTEEDRYFTIDANT---GTIKTAKIFDREET 451
Query: 78 ------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
D GL S V IR+ D+ND PE + Y+ V E + G + +
Sbjct: 452 PWYNITVAASEIDNPGLVSHVPVGIRILDVNDNPPEL-AREYDVVVCENAKPGQVIQTIT 510
Query: 125 ATDADEGQNAVVYY 138
ATD D N ++
Sbjct: 511 ATDKDNSANGARFH 524
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|426246696|ref|XP_004017128.1| PREDICTED: cadherin-18-like isoform 2 [Ovis aries]
Length = 574
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 82/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ + I + G + K L+YEK++ Y
Sbjct: 289 KIKANDADTGSNADMTYSIIDGDGVGIFSISTDKETREGILSLKKPLNYEKKKSY 343
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 353 HLDFRFSHLGPFKD------ATMLKIIVGDV-DEPPLFSMPSYVMEVYENAKIGTVVGTV 405
Query: 124 HATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D + V Y Y+ +D F +DANTG I+T K LD E+ Y
Sbjct: 406 LAQDPDSANSLVRYFIDYNAEDDRFFNIDANTGTIKTTKVLDREETPWY 454
Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 53/127 (41%), Gaps = 23/127 (18%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPI- 76
++G + V A D DS LV Y +D N + +FN+D T + P
Sbjct: 397 KIGTVVGTVLAQDPDSAN-SLVRY-FIDYNAEDDRFFNIDANTGTIKTTKVLDREETPWY 454
Query: 77 --------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
D L S TV IRV D+ND PE + Y+ V E + G + + ATD
Sbjct: 455 NITVAASENDNPSLLSHVTVGIRVLDVNDNPPEL-AREYDIVVCENSKPGQVIHTISATD 513
Query: 128 ADEGQNA 134
D+ N
Sbjct: 514 KDDFANG 520
Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|426246694|ref|XP_004017127.1| PREDICTED: cadherin-18-like isoform 1 [Ovis aries]
Length = 790
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 82/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ + I + G + K L+YEK++ Y
Sbjct: 289 KIKANDADTGSNADMTYSIIDGDGVGIFSISTDKETREGILSLKKPLNYEKKKSY 343
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 353 HLDFRFSHLGPFKD------ATMLKIIVGDV-DEPPLFSMPSYVMEVYENAKIGTVVGTV 405
Query: 124 HATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D + V Y Y+ +D F +DANTG I+T K LD E+ Y
Sbjct: 406 LAQDPDSANSLVRYFIDYNAEDDRFFNIDANTGTIKTTKVLDREETPWY 454
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 53/127 (41%), Gaps = 23/127 (18%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPI- 76
++G + V A D DS LV Y +D N + +FN+D T + P
Sbjct: 397 KIGTVVGTVLAQDPDSAN-SLVRY-FIDYNAEDDRFFNIDANTGTIKTTKVLDREETPWY 454
Query: 77 --------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
D L S TV IRV D+ND PE + Y+ V E + G + + ATD
Sbjct: 455 NITVAASENDNPSLLSHVTVGIRVLDVNDNPPEL-AREYDIVVCENSKPGQVIHTISATD 513
Query: 128 ADEGQNA 134
D+ N
Sbjct: 514 KDDFANG 520
Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|355749840|gb|EHH54178.1| T2-cadherin [Macaca fascicularis]
gi|380788279|gb|AFE66015.1| cadherin-10 preproprotein [Macaca mulatta]
Length = 788
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 164 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 222
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F V E
Sbjct: 223 PNMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESS 282
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G A+G V ATDAD G+NA V Y + + DI D G I + LDYE ++
Sbjct: 283 PVGTAIGSVKATDADTGKNAEVEYRIIDGDGTDMFDIVTEKDTQEGIITVKQPLDYESRR 342
Query: 168 LYLERV 173
LY +V
Sbjct: 343 LYTLKV 348
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|357610242|gb|EHJ66890.1| hypothetical protein KGM_21712 [Danaus plexippus]
Length = 4656
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 74/159 (46%), Gaps = 19/159 (11%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------AASYFNLDPATEHQGPI------ 76
G + ATD+DSG++G V Y L D + P + +
Sbjct: 912 GTAIFHANATDRDSGEYGHVTYTLSGGGEDEFCIDRESGVLLVCAPLDRERRALYEITIR 971
Query: 77 -QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNA 134
D GGL + A V + V D+ND P+F Y + E G V + A D D G
Sbjct: 972 ATDGGGLRAEALVRVAVDDVNDNAPKFSLSAYSARIREDVPIGTLVAVLEAFDPDLGAGG 1031
Query: 135 VVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V YS+P +DI F VD+ +G +RT K LD+E++Q+Y
Sbjct: 1032 IVSYSLPDQSADDITFTVDSTSGTLRTAKQLDFEERQVY 1070
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 84/173 (48%), Gaps = 23/173 (13%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN-----TDAASYFNLDPA--- 69
Y + ELG + +V ATD D G+ L+ Y ++ T + L A
Sbjct: 3245 LYSVTLPEDAELGTLVAKVHATDDDLGENRLIRYSFVEPTEAFELTADSGIITLRTALDR 3304
Query: 70 ---TEHQGPIQ--DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH+ ++ D G S+T+TV + V D+ND PEF+ Y +VPE G V
Sbjct: 3305 ETRAEHRLLVRASDAGQPPRSATSTVRLTVADVNDNPPEFEFQHYHAAVPEIDAPGTEVV 3364
Query: 122 RVHATDADEGQNAVVYYSV-----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
RV AT D G NA VYYS+ ED F V+ +TG + + LDYE+++ Y
Sbjct: 3365 RVMATSRDTGVNADVYYSLVGGDDRED--FSVNRSTGIVSIARPLDYERRKEY 3415
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 59/103 (57%), Gaps = 7/103 (6%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVP- 141
S+A V I + D ND +P F+ E S+ E G G+ V R+ A DAD G+NA + YS+
Sbjct: 513 SSAKVKIAIIDANDNDPVFEREEIEVSLQENGATGVIVARIVARDADSGENAYISYSIAN 572
Query: 142 -EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSY 183
+ +PF +D +G +RT + LDYE + R +++ A+ +
Sbjct: 573 LQPVPFEIDHFSGAVRTTRLLDYES----MRREYILQIRASDW 611
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 77/174 (44%), Gaps = 25/174 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDN--NTDAASYFNL------DPATEHQGPIQDEGG 81
G + +++A D L R LD+ DAA L + A EH I EG
Sbjct: 2841 GTIIAELRAAGGDLPALRLAPSRGLDDLFALDAAGRLVLSAPLDRETAQEHIIGIIAEGS 2900
Query: 82 LSSTA----TVNIRVTDINDKNPEFQSLPYEFSVPEGQDG-LAVGRVHATDADEGQNAVV 136
L S + T + V D+N+ P F S PY + E +V R+ A D D G N V
Sbjct: 2901 LGSESATMVTTKLHVLDVNEHAPSFHSQPYVVHLAENTPAHSSVLRLMADDPDAGSNGEV 2960
Query: 137 YYSVPE----------DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
YS+ E +PF VDA++G + T ALD E + Y R+ L ++ A
Sbjct: 2961 KYSLAEVDVEGAEGGGAVPFAVDAHSGWVTTTAALDRETRAEY--RLALTARDA 3012
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 32/167 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------ 82
LG +L+ ++A D+D G GL+ Y + + DA S F +DP T G ++ G L
Sbjct: 806 LGTSLVHLRARDRDLGYNGLLVYAI--SGGDADSAFRIDPVT---GELKVIGYLDRERES 860
Query: 83 ----------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHA 125
S++ + + V D+ND P+F+ F V E +G A+ +A
Sbjct: 861 EYYLNITVYDLGHPQRSASRLLPVTVLDVNDNPPKFEKTLASFRVTENAINGTAIFHANA 920
Query: 126 TDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
TD D G+ V Y++ ED F +D +G + LD E++ LY
Sbjct: 921 TDRDSGEYGHVTYTLSGGGED-EFCIDRESGVLLVCAPLDRERRALY 966
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 76/165 (46%), Gaps = 21/165 (12%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLL--DNNTD-----------AASYFNLDPATEHQGPI 76
G +++V AT +D+G V Y L+ D+ D A + + E+ +
Sbjct: 3360 GTEVVRVMATSRDTGVNADVYYSLVGGDDREDFSVNRSTGIVSIARPLDYERRKEYYLTV 3419
Query: 77 QD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
Q +GG LS AT+NI + D ND P F Y V E G+ + +V A DAD G
Sbjct: 3420 QAVDGGSPPLSDHATINITIMDSNDNPPVFSQTSYGAKVREDAGVGVRIVQVIADDADAG 3479
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N V YS+ P F +DA+TG I + LD E + Y+ V
Sbjct: 3480 TNGRVTYSIARGDPDNCFTIDADTGYISVSSRLDRESKPAYVLEV 3524
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 13/123 (10%)
Query: 60 AASYFNLDPATEHQGPIQDEGGLSST---ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
A + + + A EH ++ G++ + + VTD+ND PEF + Y V E
Sbjct: 2353 ARAALDHETACEHSLTVRATDGVTGAFADLALTLTVTDVNDCAPEFDTDEYRAGVSEAAA 2412
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVP---------EDIPFVVDANTGDIRTNKALDYEKQ 166
G AV RV ATDAD G N V YS+ E++ F VD TG++ LD E++
Sbjct: 2413 VGDAVLRVRATDADAGDNGNVTYSLSAWGPEGETGEELAFAVDPATGEVSVAGQLDRERR 2472
Query: 167 QLY 169
+
Sbjct: 2473 TAH 2475
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
Query: 44 GKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQ 103
G++ ++ + LLD Y AT+ P + SS T+ I + DIND +P F
Sbjct: 371 GEYDVIAHALLDRQNAPLGYNLTLKATDAGKPPR-----SSYLTLPITLVDINDNSPVFS 425
Query: 104 SLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNK 159
YE S+PE V R+ +D ++G NA VY + E F+V+ +TG + T
Sbjct: 426 REIYEASLPETAPPNTPVIRLKVSDRNQGSNARVYIEIVGGNEGGEFIVNPDTGVLYTAI 485
Query: 160 ALDYEKQQLY 169
LD E++ LY
Sbjct: 486 PLDAEEKSLY 495
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE 142
S A V+I VTD+ND P F PY +V G + G V RVHA DAD N V Y +
Sbjct: 2177 SHARVHIAVTDVNDNCPVFTERPYIAAVLAGAEPGAPVLRVHAVDADANDNGEVRYEMKR 2236
Query: 143 DIP--FVVDANTGDIRTNKALDYEKQ 166
F VD +G I + LD Q
Sbjct: 2237 GHGELFRVDRRSGQITLKQTLDAHNQ 2262
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
+ ++ + + + DIND P F + Y ++PE + G V +VHATD D G+N ++ YS
Sbjct: 3221 WACSSEIEVTLDDINDNAPRFSAPLYSVTLPEDAELGTLVAKVHATDDDLGENRLIRYSF 3280
Query: 141 PEDI-PFVVDANTGDIRTNKALDYEKQ 166
E F + A++G I ALD E +
Sbjct: 3281 VEPTEAFELTADSGIITLRTALDRETR 3307
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 59/137 (43%), Gaps = 18/137 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------- 67
YGA R+ +GV ++QV A D D+G G V Y + + D + D
Sbjct: 3454 YGAKVREDAGVGVRIVQVIADDADAGTNGRVTYSIARGDPDNCFTIDADTGYISVSSRLD 3513
Query: 68 ----PATEHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAV 120
PA + +D G L +TA VN+ V D ND P F+ Y V E + G +
Sbjct: 3514 RESKPAYVLEVRARDRGLPALEATAVVNVEVLDANDNPPLFEKTNYTEVVQENKPLGHTI 3573
Query: 121 GRVHATDADEGQNAVVY 137
+ TDAD N+ Y
Sbjct: 3574 LKFIVTDADAPPNSAPY 3590
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 16/126 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRL----------LDNNTDAASY---FNLDPATEHQGPI--Q 77
L VKA D D+G++G V Y + +D N+ A + + + E + P+
Sbjct: 2634 LTTVKAYDDDAGEYGTVTYSIPSAKLRETFAIDPNSGALTTRVPLDRERRAEWEVPVMAS 2693
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVV 136
D GGL V +RV D+ND P F Y + + G+ + A+D D G+NA +
Sbjct: 2694 DGGGLLRHTAVRVRVADLNDNAPAFPLREYRAAAKHDRVPGVPFLTLSASDEDVGENARL 2753
Query: 137 YYSVPE 142
YSV E
Sbjct: 2754 SYSVYE 2759
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 64/146 (43%), Gaps = 24/146 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL----DNNTDAASYFNLDPAT---- 70
Y A + +G +++V+ATD D+G G V Y L + T F +DPAT
Sbjct: 2403 YRAGVSEAAAVGDAVLRVRATDADAGDNGNVTYSLSAWGPEGETGEELAFAVDPATGEVS 2462
Query: 71 ------------EHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQ-SLPYEFSVPEG 114
H +GG L +TA + I V D+ND +P + S+ E
Sbjct: 2463 VAGQLDRERRTAHHLLVTATDGGRPQLLTTAHLFITVEDVNDCSPRMERSVVAALVSEEA 2522
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV 140
G AV RV A DADE A + +++
Sbjct: 2523 ARGTAVARVVAWDADERDAARLTFAL 2548
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 68/158 (43%), Gaps = 17/158 (10%)
Query: 37 KATDKDSGKFGLVEYRLLDNNTDAAS-----YFNLD-PATEHQGPIQDEGGLSSTATVNI 90
KA ++ G F + R N D + F L+ AT H + L + TV +
Sbjct: 138 KAEERIVGDFCFLSIRTRAGNADVLNRERKDLFRLEIRATAH---FPNGRQLEADTTVVV 194
Query: 91 RVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI-PFVV 148
VTD ND +P F YE V E ++ RV A DAD G N +YYS+ E F V
Sbjct: 195 EVTDENDLSPLFYPTQYEALVAEDTPLHSSIARVSAEDADLGINGEIYYSLAEKTDRFAV 254
Query: 149 DANTGDIRTNKALD------YEKQQLYLERVFLISKFA 180
+G + ++L +E L +R LIS A
Sbjct: 255 HPTSGVVTITRSLSIMESSRHEVTVLAHDRASLISHGA 292
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 69/160 (43%), Gaps = 27/160 (16%)
Query: 30 GVTLMQVKATDKDS-GKFGLVEYRLLDNNTDAASYFNLD--PATEHQGPI---------- 76
G ++ ATD D G+ + Y ++ + A +F++D Q P+
Sbjct: 1123 GTVVLSAAATDADPPGRDSRLAYYIVAGSGKA--HFSIDDTGVIRSQTPLDRETTAHYWL 1180
Query: 77 ----QDEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDAD 129
QD G + S V I V D+ND +P + Y SVPE G +V RV A DAD
Sbjct: 1181 TVCAQDHGLVPRHSCVEVYIEVEDVNDMSPWPEQAEYSASVPEHCAGGTSVARVVALDAD 1240
Query: 130 EGQN-AVVYYSVPEDIP---FVVDANTGDI-RTNKALDYE 164
A + YS+ P F +D TG I T + LD E
Sbjct: 1241 ASPTPARLRYSIVAGNPDGLFSIDEYTGSITTTGRTLDRE 1280
>gi|432847530|ref|XP_004066068.1| PREDICTED: protocadherin-23-like [Oryzias latipes]
Length = 3252
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 85/169 (50%), Gaps = 25/169 (14%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE---------------H 72
E+G L A D D G G+ + L+ N+ F+L+ T H
Sbjct: 1521 EVGSLLHHFLAIDGDLGANGVTTFSLIAGNSKGV--FSLEERTGLLFLSSPLDYETQQVH 1578
Query: 73 QGPIQ--DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+ ++ D G LSST T+ ++V D+ND+ P F + YE SV E +D G V RV ATD
Sbjct: 1579 RITVRAVDHGAPQLSSTQTLTVKVGDVNDQAPVFSEIIYEASVAENRDAGEPVVRVSATD 1638
Query: 128 ADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
D +NAVV+YS+ P F ++ +G I TN LD E+Q ++ RV
Sbjct: 1639 IDSEENAVVWYSLLPGPGYELFSINPYSGVITTNSRLDREQQSHFMLRV 1687
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 82/162 (50%), Gaps = 24/162 (14%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNT---------DAASYFNLDPATEHQGPIQ----DEGG- 81
V+A DKDSGK + Y LL + + ++ LD Q ++ D+G
Sbjct: 1102 VEAVDKDSGKNSQLSYILLSDGKFFRINARTGEIINWVALDRERHGQHTLKVMVTDQGHP 1161
Query: 82 -LSSTATVNIRVTDINDKNPEFQSLP--YEFSVPEGQD---GLAVGRVHATDADEGQNAV 135
L++TATV+I +TDIND +P+F+ +P E S+ D G V + ATD D G+N
Sbjct: 1162 RLNATATVHILITDINDNSPQFRHIPASKELSIHMQADAPAGSVVTNMFATDLDAGENGT 1221
Query: 136 VYYSVPED----IPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V YS+ + F VD+ +G+IR + +Q Y+ +V
Sbjct: 1222 VTYSLMTEGDAVGHFEVDSESGEIRMTQLFTQNTKQHYILKV 1263
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 55/104 (52%), Gaps = 8/104 (7%)
Query: 74 GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQ 132
GPI LSST + + + D ND +P F Y SV EG G V RV A D DEG
Sbjct: 1797 GPIP----LSSTTQLELVLLDQNDNSPSFSFRSYRASVVEGLSAGSEVLRVSAFDPDEGP 1852
Query: 133 NAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLYLERV 173
N V YS+ ED F +DA TG IRT K+LD E + Y RV
Sbjct: 1853 NGDVTYSLTEDGNQGAFSIDAFTGVIRTTKSLDRESRAQYTLRV 1896
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 84/179 (46%), Gaps = 27/179 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y + L +MQV A+D DSG G +EY +L N + A F LD
Sbjct: 2136 YKTSVWEGQVLNTYIMQVFASDADSGVNGQIEYSILSGNNNGA--FILDSLGGILATNVA 2193
Query: 69 -----ATEHQGPIQ--DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
+ ++ +Q D+G LSSTATV ++V D+ND +P ++ G
Sbjct: 2194 LDREITSSYKLVLQASDKGTPPLSSTATVRVQVVDVNDNSPVIPAMDPAVIAENLPAGSI 2253
Query: 120 VGRVHATDADEGQNAVVYYSVPEDI----PFVVDANTGDIRTNKALDYEKQQLYLERVF 174
V +V A D D N+ + YS E+ PF +D TG I +ALD+E Q+ Y +V+
Sbjct: 2254 VTQVAANDVD--LNSAITYSFSENSSSSAPFTIDRYTGLITLTQALDHEAQKEYTLKVW 2310
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 75/168 (44%), Gaps = 24/168 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD--NNTDAASYFNLDPAT----- 70
Y + ++G +QV ATD D+ +F ++ Y L D +N D F + P T
Sbjct: 553 LYSVSIPEHSDVGSCFLQVVATDADTPEFSVLLYSLSDGFDNADRHPLFQVQPHTGELCV 612
Query: 71 -----EHQGP--------IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQD 116
GP +D GG S+ V+I + D+ND P F Y SV
Sbjct: 613 SQDIDRDVGPSVYDILIKAEDPGGQSAQTYVHIEIEDLNDNAPVFNPEEYTVSVSNHAPP 672
Query: 117 GLAVGRVHATDADEGQNAVVYYS-VPEDIP--FVVDANTGDIRTNKAL 161
G + V ATD D G+ + YS +P+D+ F++D TG + N +L
Sbjct: 673 GTEILSVIATDQDTGRFGYISYSIIPKDMSSLFMLDTQTGMLFLNSSL 720
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 29/161 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP-- 75
LG +++Q+ A D D G V + +L N D +DP + E Q
Sbjct: 459 LGSSVIQMTARDADEGPNADVRFSILKTNQDG--LIRIDPQSGLVTTAAALDRESQEELW 516
Query: 76 ---IQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+ +GG LSSTATV++ + D+ND P FQ Y S+PE D G +V ATDA
Sbjct: 517 FLVVAADGGEPTLSSTATVSVTLEDVNDNEPVFQQQLYSVSIPEHSDVGSCFLQVVATDA 576
Query: 129 DEGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALD 162
D + +V+ YS+ + F V +TG++ ++ +D
Sbjct: 577 DTPEFSVLLYSLSDGFDNADRHPLFQVQPHTGELCVSQDID 617
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 74/187 (39%), Gaps = 38/187 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------- 71
Y A + ++G +L+QV A D D G GLV Y ++ N + NLDP T
Sbjct: 2562 YHAQVSENSQIGTSLLQVSAQDPDLGINGLVRYDIIAGNNKG--HLNLDPHTGLLLINHS 2619
Query: 72 ---HQGP-------IQDEGGLS-----STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
Q P D G + S A V I V+D ND P F SV E
Sbjct: 2620 LDYEQDPKYTLTIRASDAGEAAENHKVSFAVVFITVSDENDNTPYFMFPAVNCSVLENLP 2679
Query: 117 GLA-VGRVHATDADEGQNAVVYYSV------------PEDI-PFVVDANTGDIRTNKALD 162
V A D D G + YS+ PE F +D TGDI T + D
Sbjct: 2680 AFTHTCSVLAVDNDLGSYGQLTYSIVSPCFMDYSGGNPEKKEAFAIDPLTGDIHTRQTFD 2739
Query: 163 YEKQQLY 169
YE++ +Y
Sbjct: 2740 YERESVY 2746
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD--GLAVGRVHATDADEGQNAVVYYSV 140
++TATV + V DIND P F Y F+V EG GL VG V A D D G+N+ + Y +
Sbjct: 1061 TATATVIVHVLDINDNAPVFGREVYYFTVSEGSSPQGL-VGTVEAVDKDSGKNSQLSYIL 1119
Query: 141 PEDIPFV-VDANTGDIRTNKALDYEKQQLYLERVFL 175
D F ++A TG+I ALD E+ + +V +
Sbjct: 1120 LSDGKFFRINARTGEIINWVALDRERHGQHTLKVMV 1155
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 70/164 (42%), Gaps = 34/164 (20%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD----- 78
A D+D G FG YR+++ N YF LD + + P+ QD
Sbjct: 140 AEDQDEGLFGTQGYRIIEGNL--TDYFFLDYWSSSKPPLNLDLILSKKLDRETQDVFSLT 197
Query: 79 ----EGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE 130
+GG+ + + IRV D ND P F Y S+ E G V ++HATD D
Sbjct: 198 IEGFDGGIPARTGRLQLKIRVLDENDNPPVFNQTEYHTSIHEDAPVGSFVCQIHATDPDL 257
Query: 131 GQNAVVYYSVPE-----DIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V Y + + F ++ TG + N+ LD+E Q +
Sbjct: 258 GDNGRVTYEINRRQSDLNHVFSINETTGVVYLNQKLDFETQPFH 301
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 78/175 (44%), Gaps = 24/175 (13%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------ 70
+ Y A + + G +++V ATD DS + +V Y LL F+++P +
Sbjct: 1615 IIYEASVAENRDAGEPVVRVSATDIDSEENAVVWYSLLPG--PGYELFSINPYSGVITTN 1672
Query: 71 -----EHQGPI------QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG 117
E Q +D G LS TATV V D ND P F + +PE
Sbjct: 1673 SRLDREQQSHFMLRVQARDSGLRPLSGTATVLCSVLDDNDNPPVFMQSSFTIRLPENLLP 1732
Query: 118 LAVGRVHATDADEGQNAVVYYS-VPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+ A D D+ +N+ +YYS + ED F V++ TG I + + LD E+ + Y
Sbjct: 1733 GVIHTAQAFDPDQEENSTIYYSLLGEDYEGLFTVNSQTGAISSTRVLDREETENY 1787
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 64 FNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR 122
F +DP + + D G ++ V+I + DIND P+F+ Y+ SV EGQ + +
Sbjct: 2094 FEVDPHMQLV-VLGDSGLQTAYCRVSITLLDINDNAPQFEHSSYKTSVWEGQVLNTYIMQ 2152
Query: 123 VHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V A+DAD G N + YS+ + F++D+ G + TN ALD E Y
Sbjct: 2153 VFASDADSGVNGQIEYSILSGNNNGAFILDSLGGILATNVALDREITSSY 2202
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV 140
L+S+A V + VTD ND P F S Y V E Q G ++ +V A D D G N +V Y +
Sbjct: 2537 LNSSAVVRVTVTDCNDNAPIFSSTEYHAQVSENSQIGTSLLQVSAQDPDLGINGLVRYDI 2596
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+D +TG + N +LDYE+ Y
Sbjct: 2597 IAGNNKGHLNLDPHTGLLLINHSLDYEQDPKY 2628
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
LSS + ++V D ND P F+ Y SV E G +V ++ A DADEG NA V +S+
Sbjct: 424 LSSEMVLLLKVLDANDCLPVFEKEVYTISVAEDLPLGSSVIQMTARDADEGPNADVRFSI 483
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
+D +D +G + T ALD E Q+ E FL+
Sbjct: 484 LKTNQDGLIRIDPQSGLVTTAAALDRESQE---ELWFLV 519
Score = 42.7 bits (99), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNA-VVYYSVP 141
STA VNI + DIND P F +V +G G + HA D D G N V YY
Sbjct: 847 STAQVNISIADINDNAPVFPKSSDSITVSQGTLPGTVLFIAHAHDHDSGANGRVRYYLKH 906
Query: 142 EDIPFVVDANTGDIRTNKALDYEKQQLY 169
F ++ N G + N++L Q Y
Sbjct: 907 TGGLFAIERNLGTVTLNQSLQGGHQSSY 934
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 17/98 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDP--ATEHQGPIQ-----D 78
++ V ATD+DSG G + YRLL + D S F P A + PI
Sbjct: 2355 VLTVSATDRDSGLNGKITYRLLSSPLQGFYIQPDTGSVFTSKPLKAITNTNPIHLLVEAR 2414
Query: 79 EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
+GG S+ A++++ + D ND P F Y ++PE
Sbjct: 2415 DGGDPVRSTVASIDVLILDSNDHEPLFPQDVYTLTLPE 2452
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 26/137 (18%)
Query: 36 VKATDKDSGKFGLVEYRLLD--------NNTDAASYFNLDPAT-----------EHQG-- 74
V A D D G +G + Y ++ N + F +DP T E +
Sbjct: 2687 VLAVDNDLGSYGQLTYSIVSPCFMDYSGGNPEKKEAFAIDPLTGDIHTRQTFDYERESVY 2746
Query: 75 ----PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+D+G ++T V + + +++ +P F Y F +PE + G VG V A D D
Sbjct: 2747 CFVVEARDKGDKTATTRVQVLIKGVDEFSPVFAQNKYHFLLPEHIKTGEIVGFVMAVDQD 2806
Query: 130 EGQNAVVYYSVPEDIPF 146
G + +V YS+ PF
Sbjct: 2807 GGVDGLVEYSLVNSSPF 2823
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 31/166 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------------ 77
G + + ATD D+G+ G V Y L+ DA +F +D + Q
Sbjct: 1203 GSVVTNMFATDLDAGENGTVTYSLMTEG-DAVGHFEVDSESGEIRMTQLFTQNTKQHYIL 1261
Query: 78 ----DEGGLS---STATVNIRV--TDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDA 128
+GG+S +TA ++++V ++ Q+L + F + + G +G V
Sbjct: 1262 KVTAKDGGVSPQENTAVLHVQVYGSEKAFGISSHQALRHFFVREDTKPGAVIGSVSV--- 1318
Query: 129 DEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEK-QQLYL 170
G +YS+ E + F +D +GD+ N+ LDYE Q +L
Sbjct: 1319 --GSEGRFHYSIAEGDGSLYFGIDGTSGDLYVNQPLDYESTSQFFL 1362
Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 51/119 (42%), Gaps = 18/119 (15%)
Query: 59 DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
++ S F L E GP G++ + V++ V D+ND P F F + E
Sbjct: 1355 ESTSQFFLLVRAEDVGP---AAGVNVSVAVSVTVEDVNDHTPWFLEELVIFGLREDA--- 1408
Query: 119 AVGRV----HATDADEG-QNAVVYYSVPEDI-------PFVVDANTGDIRTNKALDYEK 165
AVG + HA DAD N + YS+ DI PF +D TG + LD E
Sbjct: 1409 AVGSLAFAFHARDADGTFPNGALRYSLTSDISESPSHFPFDIDPRTGCLTVAAPLDRES 1467
>gi|301607896|ref|XP_002933536.1| PREDICTED: protocadherin-23-like [Xenopus (Silurana) tropicalis]
Length = 3303
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 84/182 (46%), Gaps = 30/182 (16%)
Query: 4 CPIPSALEMTSDS------LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-- 55
C I +E T+D+ FY ++ LG +QVKATD DSG FG + Y + D
Sbjct: 585 CTITITVEDTNDNDPIFLQQFYNVSLQEHTVLGHCFLQVKATDADSGPFGQIHYSVYDGF 644
Query: 56 NNTDAASYFNLDPAT----------EHQGPI--------QDEGGLSSTATVNIRVTDIND 97
+NT + F +DP + + GP +DEGGLS+ A V + + DIND
Sbjct: 645 HNTKESQSFRIDPDSGRICVSNDIDKESGPTSYDLLVKAEDEGGLSAQAFVRVDIEDIND 704
Query: 98 KNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTG 153
P F+ Y S+ Q G + V A D DEG V Y + F +D++TG
Sbjct: 705 NAPVFEPSTYVTSISSHTQPGTEILNVMAIDRDEGLFGDVTYELLSGEHSSLFTIDSSTG 764
Query: 154 DI 155
I
Sbjct: 765 II 766
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 82/178 (46%), Gaps = 25/178 (14%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------EHQ 73
A + ++G + ++ A D D G+ G + + + + N A F LD T E
Sbjct: 1561 ASVMEDAQIGSLVHRIVAKDPDEGRNGKIGFHIKEGN--AQQVFLLDETTGWLTLHSEID 1618
Query: 74 GPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAV 120
+QD LS T T+ I + D+NDK P F YE +VPE QD GL V
Sbjct: 1619 REVQDHYILTILALDDGIPSLSVTQTLTISLIDVNDKTPTFTQGLYEAAVPENQDPGLYV 1678
Query: 121 GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
+V A D D G N+V+ Y + P F ++ TG++ T D E+Q ++ V +
Sbjct: 1679 IKVAAVDYDLGNNSVLTYEILPGPAYGHFRINPETGELVTTTVFDREQQDRFIIEVLV 1736
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 86/194 (44%), Gaps = 27/194 (13%)
Query: 4 CPIPSALEMTSDSLFYGAMAR--DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA 61
C I + T + LF R + +LG+ + V A DKD+G G + +++ D N
Sbjct: 1752 CSILDENDHTPEVLFPDVEIRVPENQDLGI-IHTVLAADKDAGNNGRLHFQITDGN--MG 1808
Query: 62 SYFNLDPATEHQGP-----------------IQDEGG--LSSTATVNIRVTDINDKNPEF 102
YF ++ + D G S+ A + I V D ND P F
Sbjct: 1809 GYFAINNTSGQLWATRTLDREDFSSFTITVECHDLGTPHRSTIAKLRITVLDENDNPPTF 1868
Query: 103 QSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNK 159
Y V E + G AV ++ A+DADEG N + YS+ +D F V+ TG+I T +
Sbjct: 1869 PKSQYRTLVREDLKIGSAVLKLQASDADEGLNKEIMYSLIDDTQGAFTVNRTTGNIVTIR 1928
Query: 160 ALDYEKQQLYLERV 173
LD E + Y+ RV
Sbjct: 1929 TLDREVKHQYVFRV 1942
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 67/149 (44%), Gaps = 23/149 (15%)
Query: 36 VKATDKDSGKFGLVEYRLLD--NN----------TDAASYFNLDPATEHQGPIQDEGGL- 82
++A D+DSG G + Y LL NN + AS A + + G
Sbjct: 1149 IQAFDRDSGNNGQLSYFLLSEGNNFLISSKTGEIINCASLDRERKAHHELNVLVTDNGTP 1208
Query: 83 --SSTATVNIRVTDINDKNPEFQSLP----YEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
++T TV I V D+ND P F L V EGQ + + V V+A D D G N
Sbjct: 1209 RRNATTTVYIIVADLNDNKPYFPQLASGKQLHVKVMEGQAEPMLVATVYAKDPDAGNNGT 1268
Query: 136 VYYSVPEDIP---FVVDANTGDIRTNKAL 161
V Y D FV++A+TG+I T KAL
Sbjct: 1269 VVYFFASDESFGQFVINASTGEIWTTKAL 1297
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 19/172 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA----------ASYFNLDP 68
Y + R+ ++G +++++A+D D G + Y L+D+ A + LD
Sbjct: 1873 YRTLVREDLKIGSAVLKLQASDADEGLNKEIMYSLIDDTQGAFTVNRTTGNIVTIRTLDR 1932
Query: 69 ATEHQ---GPIQDEGGL----SSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAV 120
+HQ + + L S+T V + + D+ND +P F P + P+ + +
Sbjct: 1933 EVKHQYVFRVVASDCSLRNPKSATVKVLVYIEDVNDNSPVFTENPIHVLISPKVLENKTI 1992
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEKQQLYLE 171
VHA+D D G N V Y++ + PF + G+++ L E L+
Sbjct: 1993 ANVHASDVDLGLNGTVVYNLIKSNPFFYITQEKGEVKLQMPLPAEFSSTVLQ 2044
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 74/173 (42%), Gaps = 25/173 (14%)
Query: 29 LGVTLMQVKATDKD-SGKFGLVEYRLLDNNTDAASYF------NLDPATEHQGPIQDEGG 81
+G L KA DKD S + + Y L + T +F L A E + +
Sbjct: 1460 VGTLLYTFKANDKDGSLENSKIRYSLNTHGTGENPFFIHEWEGALTTANELDREMAESFV 1519
Query: 82 LSSTAT---------------VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHAT 126
L+ TAT V I + DIND +P+ SLP + + Q G V R+ A
Sbjct: 1520 LTVTATDQAANISHRRCTSVIVRIVIQDINDNSPQVLSLPVASVMEDAQIGSLVHRIVAK 1579
Query: 127 DADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
D DEG+N + + + E F++D TG + + +D E Q Y+ + +
Sbjct: 1580 DPDEGRNGKIGFHIKEGNAQQVFLLDETTGWLTLHSEIDREVQDHYILTILAL 1632
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 24/169 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + + G+ +++V A D D G ++ Y +L A +F ++P T
Sbjct: 1663 LYEAAVPENQDPGLYVIKVAAVDYDLGNNSVLTYEILPG--PAYGHFRINPETGELVTTT 1720
Query: 71 ----EHQGP------IQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
E Q ++D G LSST + + D ND PE E VPE QD
Sbjct: 1721 VFDREQQDRFIIEVLVKDGGSPPLSSTTAILCSILDENDHTPEVLFPDVEIRVPENQDLG 1780
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
+ V A D D G N +++ + + F ++ +G + + LD E
Sbjct: 1781 IIHTVLAADKDAGNNGRLHFQITDGNMGGYFAINNTSGQLWATRTLDRE 1829
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 76/174 (43%), Gaps = 30/174 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDS-GKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G ++ +KA D D G V Y L ++ +S F L+P T
Sbjct: 500 YQATISEATSIGTAVLMLKAQDLDEDGPNSRVTYSLQESQN--SSSFILEPGTGVLSIAQ 557
Query: 71 --EHQ-GPI-------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+H+ P+ D G LSS+ T+ I V D ND +P F Y S+ E G
Sbjct: 558 LLDHESAPVLNLVAVATDHGSPPLSSSCTITITVEDTNDNDPIFLQQFYNVSLQEHTVLG 617
Query: 118 LAVGRVHATDADEGQNAVVYYSV-------PEDIPFVVDANTGDIRTNKALDYE 164
+V ATDAD G ++YSV E F +D ++G I + +D E
Sbjct: 618 HCFLQVKATDADSGPFGQIHYSVYDGFHNTKESQSFRIDPDSGRICVSNDIDKE 671
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 78/182 (42%), Gaps = 27/182 (14%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------ 68
D L Y + + ++QV A D DSG G ++Y ++ N + A F LD
Sbjct: 2178 DQLDYISFVSEGQPFNTFVIQVFAADGDSGINGQIDYSIISGNENNA--FVLDSRHGILS 2235
Query: 69 ---------ATEHQGPIQ--DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
+ ++ +Q D G SST+ V + + DIND P + +
Sbjct: 2236 TNVILDREIKSSYRLTVQATDRGSPSCSSTSVVTVLILDINDNAPTIPPMNTVLIAEDAA 2295
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPED----IPFVVDANTGDIRTNKALDYEKQQLYLE 171
G ++G + A D D + + Y+ E+ + F +D +G I ++LDYE+ +
Sbjct: 2296 PGYSIGSISANDVDLRPD--LSYTFTENGNPGLKFAIDRYSGIITLTESLDYEESSQHCL 2353
Query: 172 RV 173
R+
Sbjct: 2354 RI 2355
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 14/118 (11%)
Query: 59 DAASYFNLDPATEHQG--PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ AS LD +QG P L+S+AT+ I + D ND P F + Y SV E
Sbjct: 2563 EVASAHRLDIFVSNQGFPP------LNSSATIIINILDSNDNPPLFSNSEYHVSVREHYP 2616
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ + ATD+D G+NA + YS+ E++ F +DA G + + LDYE+ Y
Sbjct: 2617 LKSTIIIISATDSDTGENADITYSIVSGNDENV-FTIDAQNGTVTLVQPLDYEETMKY 2673
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP-EDIP 145
V+I V D ND P F L Y+ V E G +V VHATD D G N V YS+ +
Sbjct: 252 VDIVVMDANDNPPVFDQLDYKGWVWENAPIGTSVCTVHATDPDLGSNGEVRYSLRFGEGY 311
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F VD +G+I ++ LD E+ ++
Sbjct: 312 FTVDEESGEISVSRPLDREQISIH 335
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 70/169 (41%), Gaps = 30/169 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G ++ V A D+D G FG V Y LL + +S F +D +T G I
Sbjct: 725 GTEILNVMAIDRDEGLFGDVTYELLSG--EHSSLFTIDSST---GIIYLISVLSHLEDSW 779
Query: 77 -------QDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHAT 126
+D+GGL+S ATV + + F+ Y F + E G AVG V A
Sbjct: 780 VSLSVAARDKGGLTSAVNATVTMNILKTATAPAIFEKSRYTFVIAEDVPKGSAVGTVKAR 839
Query: 127 DADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ V Y + ++ F + G IRT K LD+E L + V
Sbjct: 840 EPLNSLEPVSYRIISGNVHQMFTIHTQFGIIRTQKELDFESLPLVVLTV 888
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 31/180 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y R+ + L T++ + ATD D+G+ + Y ++ N + + F +D
Sbjct: 2607 YHVSVREHYPLKSTIIIISATDSDTGENADITYSIVSGNDE--NVFTIDAQNGTVTLVQP 2664
Query: 69 -----ATEHQGPIQDEGGLSST-----ATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
++ +Q G S A ++I V D ND P+F ++ E
Sbjct: 2665 LDYEETMKYSLTLQARDGHGSKRNVAFALLSITVLDENDFAPKFLFQSQSCNIYENVPFF 2724
Query: 119 A-VGRVHATDADEGQNAVVYYSVPEDI--------PFVVDANTGDIRTNKALDYEKQQLY 169
+ V V+A D D GQ ++ +S+ F++D+ TGDI T +DYE Q+ +
Sbjct: 2725 SPVCSVNAIDLDSGQYGILSFSIQSSCFNDQQHPATFLIDSLTGDIYTKHRIDYEMQERH 2784
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 72/174 (41%), Gaps = 25/174 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY A+ + E G ++ VKA + ++ Y + + A FNL+P T
Sbjct: 2078 FYEAIILENSEAGTLVVTVKALYHNPND-EIIHYTVFSGDKKGA--FNLNPITGDLMVKE 2134
Query: 71 ----------EHQGPIQDEGGLSST-ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
+ I E +T V + + D ND P F L Y V EGQ
Sbjct: 2135 PRLLDFETVNKFNLIISAESSQYTTYCRVTVFIQDDNDNAPVFDQLDYISFVSEGQPFNT 2194
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V +V A D D G N + YS+ E+ FV+D+ G + TN LD E + Y
Sbjct: 2195 FVIQVFAADGDSGINGQIDYSIISGNENNAFVLDSRHGILSTNVILDREIKSSY 2248
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFS-----VPEGQDGLAVGRVHATDADEGQNA-VV 136
++TA++ +++ D ND +P F + F+ VP G +G + A D D G N +
Sbjct: 1108 TATASIIVKILDENDNSPSFDHATHFFTVNESPVPHG----VIGSIQAFDRDSGNNGQLS 1163
Query: 137 YYSVPEDIPFVVDANTGDIRTNKALDYEKQ 166
Y+ + E F++ + TG+I +LD E++
Sbjct: 1164 YFLLSEGNNFLISSKTGEIINCASLDRERK 1193
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP- 141
S+ VN+ +TD ND P F S SV + G A+ ATD D G N + YS+
Sbjct: 899 SSTQVNVTITDANDNPPVFSSENERISVHQNTSPGTAIYIAQATDLDSGFNGQISYSIAS 958
Query: 142 --EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+D+ F++D+ G + N L ++ + L
Sbjct: 959 ENQDL-FIIDSTFGVLYLNATLSSVREHVLL 988
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 80/177 (45%), Gaps = 37/177 (20%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLD-------NNTDAASYFNL-----DPATEHQGPI--QD 78
+ V ATD+DS +G + Y+++ N T + Y ++ + +TE Q I D
Sbjct: 2401 ITTVSATDQDSEIYGPITYKIISPLKGFVINTTSGSVYTDMPLGKENKSTEIQILIVAMD 2460
Query: 79 EGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEG-QNA 134
G L+STA +++ + D+N+ P F Y +V E G V + A D D +NA
Sbjct: 2461 NGSPPLTSTAMLSVTILDVNNYAPTFSEDIYYVNVSEDALVGDTVLTLTAMDLDWSPKNA 2520
Query: 135 VVYYS----------------VPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
++ +S V IPF+V TG + N+ LD+E + +F+
Sbjct: 2521 LIDFSIIGGNAHNLFYLESSEVLSHIPFIV---TGKLIINQPLDFEVASAHRLDIFV 2574
Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQD-GLAVGRVHATDADE-GQNAVVYY 138
L S T+ + VTD+ND+ P F Q Y+ ++ E G AV + A D DE G N+ V Y
Sbjct: 474 LQSHKTLLLSVTDLNDQPPMFLQPEGYQATISEATSIGTAVLMLKAQDLDEDGPNSRVTY 533
Query: 139 SVPE---DIPFVVDANTGDIRTNKALDYE 164
S+ E F+++ TG + + LD+E
Sbjct: 534 SLQESQNSSSFILEPGTGVLSIAQLLDHE 562
Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 21/127 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPAT-----EHQ----------- 73
+ V A D DSG++G++ + + N+ + F +D T +H+
Sbjct: 2727 VCSVNAIDLDSGQYGILSFSIQSSCFNDQQHPATFLIDSLTGDIYTKHRIDYEMQERHCL 2786
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEG 131
++D S+ V I + ++ P F Y F +PE G +G+V A D DEG
Sbjct: 2787 VVQVKDRSESSACVLVYIDIEGEDEFQPVFYQNQYLFDLPEENIGGQEIGKVGALDNDEG 2846
Query: 132 QNAVVYY 138
+ VV+Y
Sbjct: 2847 LDGVVHY 2853
>gi|431917278|gb|ELK16814.1| Cadherin-9 [Pteropus alecto]
Length = 821
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 88/189 (46%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + +G +++QV ATD D +G V Y +L YF++DP +
Sbjct: 199 LYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGIIK 254
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
++Q IQ + GGLS T TVNI +TD+N+ P F Y+F+ P
Sbjct: 255 TALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNSPPRFPQSTYQFNSP 314
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPED-----IPFVVDANT--GDIRTNKALDYE 164
E G +GR+ A D D G+NA + YS+ E + D T G I + LD+E
Sbjct: 315 ESVPLGTHLGRIKANDPDVGENAEMEYSIAEGDGADMFDVITDKATQEGIITVKQNLDFE 374
Query: 165 KQQLYLERV 173
+ LY RV
Sbjct: 375 NKILYTLRV 383
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 183 IKIHDINDNEPKFTKDLYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQP 242
Query: 146 -FVVDANTGDIRT 157
F VD +G I+T
Sbjct: 243 YFSVDPESGIIKT 255
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G + Y + FV+D NTGDI K LD E++ LY+
Sbjct: 104 GTDTQYVGKLH-TDQDKGDGNLKYILTGDGAGSLFVIDENTGDIHAAKKLDREEKSLYIL 162
Query: 172 RVFLISK 178
R I +
Sbjct: 163 RAKAIDR 169
Score = 35.8 bits (81), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 59/169 (34%), Gaps = 24/169 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEY---------RLLDNNTDAASYFNLDPATEHQGPIQD-- 78
G + QV A D DS L++Y R+ N + S F L P P +
Sbjct: 435 GSIIGQVTAYDPDSMN-NLIKYSVDRHTDMERIFSINAENGSIFTLKPLDRESSPWHNIT 493
Query: 79 -------EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEG 131
SS V IR+ DIND PEF F + G + V D D+
Sbjct: 494 VTATEINNSKQSSHIPVFIRILDINDHAPEFAMYYETFVCENAKPGQLIQTVSVMDKDDP 553
Query: 132 QNAVVYY--SVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
++ VPE + F + N G + K YL + +
Sbjct: 554 PRGHKFFFEPVPEFPLNPNFTIVDNKGIMTRKDGYSRSKMNTYLLPILI 602
>gi|355691234|gb|EHH26419.1| T2-cadherin [Macaca mulatta]
Length = 783
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 187 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 245
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F V E
Sbjct: 246 PNMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESS 305
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G A+G V ATDAD G+NA V Y + + DI D G I + LDYE ++
Sbjct: 306 PVGTAIGSVKATDADTGKNAEVEYRIIDGDGTDMFDIVTEKDTQEGIITVKQPLDYESRR 365
Query: 168 LYLERV 173
LY +V
Sbjct: 366 LYTLKV 371
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 171 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 230
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 231 YFSVEPETGIIRT 243
>gi|403298927|ref|XP_003940251.1| PREDICTED: cadherin-10 [Saimiri boliviensis boliviensis]
Length = 788
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 164 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 222
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F V E
Sbjct: 223 PNMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESS 282
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G A+G V ATDAD G+NA V Y + + DI D G I K LD+E ++
Sbjct: 283 PVGTAIGSVKATDADTGKNAEVEYRIIDGDGTDMFDIVTEKDTQEGIITVKKPLDFESRR 342
Query: 168 LYLERV 173
LY +V
Sbjct: 343 LYTLKV 348
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|410949761|ref|XP_003981586.1| PREDICTED: cadherin-18 isoform 2 [Felis catus]
Length = 574
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ I + G + K L+YEK++ Y
Sbjct: 289 KIKANDADTGSNADMTYSIINGDGIGIFSISTDKETREGILSLKKPLNYEKKKSY 343
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 353 HLDFRFSHLGPFKD------ATMLKIIVGDV-DEPPLFSMPSYVMEVYENAKIGTVVGTV 405
Query: 124 HATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D + V Y+ S +D F +DAN+G IRT K LD E+ Y
Sbjct: 406 LAQDPDSANSLVRYFIDHSGEDDRVFNIDANSGTIRTTKVLDREETPWY 454
Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|402871232|ref|XP_003899578.1| PREDICTED: cadherin-10 [Papio anubis]
Length = 788
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 164 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 222
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F V E
Sbjct: 223 PNMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESS 282
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G A+G V ATDAD G+NA V Y + + DI D G I + LDYE ++
Sbjct: 283 PVGTAIGSVKATDADTGKNAEVEYRIIDGDGTDMFDIVTEKDTQEGIITVKQPLDYESRR 342
Query: 168 LYLERV 173
LY +V
Sbjct: 343 LYTLKV 348
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|449272547|gb|EMC82420.1| Cadherin-6 [Columba livia]
Length = 790
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 86/188 (45%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 164 YNASIPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKT 219
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 220 ALLNMDRENRDQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFRTPE 279
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEK 165
+GR+ A DAD +NA + YS+ E I D G I KALD+E
Sbjct: 280 SMPPDSPIGRIKANDADVDENAEIEYSITEGDGYDMFGITTDKDTQEGIITVKKALDFEN 339
Query: 166 QQLYLERV 173
+ LY+ +V
Sbjct: 340 KNLYILKV 347
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y S+PE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPMFTKDVYNASIPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRT 157
F V++ TG I+T
Sbjct: 207 YFSVESETGIIKT 219
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ D D+G ++ Y + D+ F+++ NTGDI+ K LD E++ +Y+
Sbjct: 68 GTDYQYVGKLHS-DQDKGDGSLKYILSGDGAGDL-FIINENTGDIQATKRLDREEKPVYI 125
Query: 171 ERVFLISK 178
R I++
Sbjct: 126 LRAQAINR 133
>gi|266454921|ref|NP_001161139.1| cadherin-18 isoform 2 preproprotein [Homo sapiens]
gi|194379154|dbj|BAG58128.1| unnamed protein product [Homo sapiens]
Length = 574
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ I + G + K L+YEK++ Y
Sbjct: 289 KIKANDADTGSNADMTYSIINGDGMGIFSISTDKETREGILSLKKPLNYEKKKSY 343
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 353 HLDFRFSHLGPFKD------ATMLKIIVGDV-DEPPLFSMPSYLMEVYENAKIGTVVGTV 405
Query: 124 HATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D + V Y Y+V +D F +DANTG IRT K LD E+ Y
Sbjct: 406 LAQDPDSTNSLVRYFINYNVEDDRFFNIDANTGTIRTTKVLDREETPWY 454
Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|48976113|ref|NP_001001758.1| cadherin-6 precursor [Gallus gallus]
gi|13431348|sp|Q90762.1|CADH6_CHICK RecName: Full=Cadherin-6; AltName: Full=Cadherin-6B; Short=c-cad6B;
Flags: Precursor
gi|867999|dbj|BAA07720.1| chicken cadherin-6B [Gallus gallus]
Length = 790
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 86/188 (45%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 164 YNASIPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKT 219
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 220 ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFRAPE 279
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEK 165
+GR+ A DAD +NA + YS+ E I D G I KALD+E
Sbjct: 280 STPPDSPIGRIKANDADVDENAEIEYSITEGDGYDMFGITTDKDTQEGIITVKKALDFEN 339
Query: 166 QQLYLERV 173
+ LY+ +V
Sbjct: 340 KNLYILKV 347
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y S+PE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPMFTKDVYNASIPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 207 YFSVESETGIIKTALLNMDRENREQY 232
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H+ D D+G ++ Y + F+++ NTGDI+ K LD E++ +Y+
Sbjct: 68 GTDYQYVGKLHS-DQDKGDGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYIL 126
Query: 172 RVFLISK 178
R I++
Sbjct: 127 RAQAINR 133
>gi|301773674|ref|XP_002922256.1| PREDICTED: cadherin-18-like [Ailuropoda melanoleuca]
Length = 790
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ I + G + K L+YEK++ Y
Sbjct: 289 KIKANDADTGSNADMTYSIINGDGIGIFSISTDKETREGILSLKKPLNYEKKKSY 343
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 353 HLDFRFSHLGPFKD------ATMLKIIVGDV-DEPPLFSMPSYVMEVYENAKIGTVVGTV 405
Query: 124 HATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D + V Y YS +D F +DANTG IRT K LD E+ Y
Sbjct: 406 LAQDPDSANSLVRYFIDYSAEDDRCFNIDANTGTIRTTKVLDREETPWY 454
Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|332821712|ref|XP_003310818.1| PREDICTED: cadherin-18 isoform 2 [Pan troglodytes]
Length = 574
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ I + G + K L+YEK++ Y
Sbjct: 289 KIKANDADTGSNADMTYSIINGDGMGIFSISTDKETREGILSLKKPLNYEKKKSY 343
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 353 HLDFRFSHLGPFKD------ATMLKIIVGDV-DEPPLFSMPSYLMEVYENAKIGTVVGTV 405
Query: 124 HATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D + V Y Y+V +D F +DANTG IRT K LD E+ Y
Sbjct: 406 LAQDPDSTNSLVRYFINYNVEDDRFFNIDANTGTIRTTKVLDREETPWY 454
Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|431917281|gb|ELK16817.1| Cadherin-18 [Pteropus alecto]
Length = 790
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ I + G + K L+YEK++ Y
Sbjct: 289 KIKANDADTGSNADMTYSIVNGDGIGIFSISTDKETREGILSLKKPLNYEKKKSY 343
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 353 HLDFRFSHLGPFKD------ATMLKIIVGDV-DEPPLFSMPSYIMEVYENAKIGTVVGTV 405
Query: 124 HATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D + V Y Y+ +D F +DA+TG I+T + LD E+ Y
Sbjct: 406 LAQDPDSANSLVRYFIDYNGEDDRFFNIDAHTGTIKTTQVLDREETPWY 454
Score = 39.3 bits (90), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 55/130 (42%), Gaps = 29/130 (22%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ---------- 77
++G + V A D DS LV Y +D N + +FN+D H G I+
Sbjct: 397 KIGTVVGTVLAQDPDSAN-SLVRY-FIDYNGEDDRFFNIDA---HTGTIKTTQVLDREET 451
Query: 78 ------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
D GL S TV IRV D+ND P+ + Y+ V E + G + +
Sbjct: 452 PWYNITVAASEKDNPGLLSHVTVGIRVLDVNDNPPQL-AREYDIVVCENSKPGQVIHTIS 510
Query: 125 ATDADEGQNA 134
ATD D+ N
Sbjct: 511 ATDKDDFANG 520
Score = 36.2 bits (82), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|4826671|ref|NP_004925.1| cadherin-18 isoform 1 preproprotein [Homo sapiens]
gi|3023435|sp|Q13634.1|CAD18_HUMAN RecName: Full=Cadherin-18; AltName: Full=Cadherin-14; Flags:
Precursor
gi|1389853|gb|AAB02933.1| cadherin-14 [Homo sapiens]
gi|119589257|gb|EAW68851.1| cadherin 18, type 2 [Homo sapiens]
gi|158260117|dbj|BAF82236.1| unnamed protein product [Homo sapiens]
Length = 790
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ I + G + K L+YEK++ Y
Sbjct: 289 KIKANDADTGSNADMTYSIINGDGMGIFSISTDKETREGILSLKKPLNYEKKKSY 343
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 353 HLDFRFSHLGPFKD------ATMLKIIVGDV-DEPPLFSMPSYLMEVYENAKIGTVVGTV 405
Query: 124 HATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D + V Y Y+V +D F +DANTG IRT K LD E+ Y
Sbjct: 406 LAQDPDSTNSLVRYFINYNVEDDRFFNIDANTGTIRTTKVLDREETPWY 454
Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|355749836|gb|EHH54174.1| Cadherin-14 [Macaca fascicularis]
Length = 790
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ I + G + K L+YEK++ Y
Sbjct: 289 KIKANDADTGSNADMTYSIINGDGMGIFSISTDKETREGILSLKKPLNYEKKKSY 343
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 353 HLDFRFSHLGPFKD------ATMLKIIVGDV-DEPPLFSMPSYVMEVYENAKIGTVVGTV 405
Query: 124 HATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D + V Y Y+ +D F +DANTG I+T K LD E+ Y
Sbjct: 406 LAQDPDSANSLVRYFINYNAEDDRFFNIDANTGTIKTTKVLDREETPWY 454
Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|326672581|ref|XP_003199698.1| PREDICTED: cadherin-18-like, partial [Danio rerio]
Length = 654
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 81/172 (47%), Gaps = 31/172 (18%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EH 72
ELG ++ QV ATD D +G R++ + YF++DP T EH
Sbjct: 179 ELGTSVFQVTATDADDPTYGN-SARVVYSVLHGQPYFSVDPKTGIIRTALADMDREAREH 237
Query: 73 QGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
+ GGLS + TVNI +TD+ND P+F Y+ VPE Q G VG++
Sbjct: 238 YSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPKFPQKNYQVFVPESAQVGKPVGKIK 297
Query: 125 ATDADEGQNAVVYYSV--PE-----DIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D G NA + YS+ PE I D G I K L+YEK++ Y
Sbjct: 298 ANDEDIGINAEIKYSILNPEGAAVFSISTDKDTREGVITLRKPLNYEKKKQY 349
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F P+ SVPE + G +V +V ATDAD+ G +A V YSV P
Sbjct: 153 IKVQDINDNAPKFPDGPFVTSVPEMSELGTSVFQVTATDADDPTYGNSARVVYSVLHGQP 212
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F VD TG IRT A +D E ++ Y
Sbjct: 213 YFSVDPKTGIIRTALADMDREAREHY 238
Score = 35.8 bits (81), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F+++ TGDI K+LD EK+ Y+
Sbjct: 74 GTDAQYVGKLHS-NSDKGDGSVRYILSGEGAGSIFIINEVTGDIHATKSLDREKKSHYV 131
>gi|114600921|ref|XP_526963.2| PREDICTED: cadherin-18 isoform 3 [Pan troglodytes]
gi|332821710|ref|XP_003310817.1| PREDICTED: cadherin-18 isoform 1 [Pan troglodytes]
gi|410331517|gb|JAA34705.1| cadherin 18, type 2 [Pan troglodytes]
Length = 790
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ I + G + K L+YEK++ Y
Sbjct: 289 KIKANDADTGSNADMTYSIINGDGMGIFSISTDKETREGILSLKKPLNYEKKKSY 343
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 353 HLDFRFSHLGPFKD------ATMLKIIVGDV-DEPPLFSMPSYLMEVYENAKIGTVVGTV 405
Query: 124 HATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D + V Y Y+V +D F +DANTG IRT K LD E+ Y
Sbjct: 406 LAQDPDSTNSLVRYFINYNVEDDRFFNIDANTGTIRTTKVLDREETPWY 454
Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|441596423|ref|XP_004092928.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-8 [Nomascus
leucogenys]
Length = 804
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 77/172 (44%), Gaps = 20/172 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY + +G +++V ATD D+G G + Y L + + + FN+D T
Sbjct: 247 FYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFNVDFLTGEIRLKK 306
Query: 71 ----------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
E +D GG S TV I+V D+ND PE + +PE Q V
Sbjct: 307 QLDFEKLQSYEVNIEARDAGGFSGKCTVLIQVMDVNDHAPEVTMSAFTSPIPENQPETVV 366
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
+D D G+N + S+ ED+PF++ ++ G+ + T LD E + Y
Sbjct: 367 ALFSVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEY 418
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
S TA V I V D+ND PEF+ Y + E G V +V ATD D G N + YS+
Sbjct: 224 SGTAQVYIEVVDVNDNAPEFEQPFYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLF 283
Query: 141 --PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
++I F VD TG+IR K LD+EK Q Y
Sbjct: 284 QASDEISKTFNVDFLTGEIRLKKQLDFEKLQSY 316
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L++ + + V+D+ND P F Y V E L +G V ATD D G NA V YS+
Sbjct: 432 LTTHLNMTVLVSDVNDNAPTFTQTSYTLFVRENNSPSLHIGSVSATDRDSGTNAQVTYSL 491
Query: 141 --PED--IPFV----VDANTGDIRTNKALDYEKQQLYLERV 173
P+D +P ++A+ G + +LDYE Q + RV
Sbjct: 492 LPPQDPHLPLASLVSINADNGHLFALISLDYEALQAFEFRV 532
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 76/187 (40%), Gaps = 35/187 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL-------------DNNTDAASYFN 65
Y R+ + + + V ATD+DSG V Y LL N D F
Sbjct: 457 YTLFVRENNSPSLHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFA 516
Query: 66 LDP-------ATEHQGPIQDEG--GLSSTATVNIRVTDINDKNP------EFQSLPYEFS 110
L A E + D G LSS A V + V D ND +P + S P
Sbjct: 517 LISLDYEALQAFEFRVGATDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTEL 576
Query: 111 VPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL---DY 163
VP + G V +V A D D GQNA + Y + E F V A+ G++RT + L D
Sbjct: 577 VPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSEHDA 636
Query: 164 EKQQLYL 170
K +L +
Sbjct: 637 AKHRLVV 643
>gi|397494221|ref|XP_003817983.1| PREDICTED: cadherin-18 [Pan paniscus]
Length = 790
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ I + G + K L+YEK++ Y
Sbjct: 289 KIKANDADTGSNADMTYSIINGDGMGIFSISTDKETREGILSLKKPLNYEKKKSY 343
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 353 HLDFRFSHLGPFKD------ATMLKIIVGDV-DEPPLFSMPSYLMEVYENAKIGTVVGTV 405
Query: 124 HATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D + V Y Y+V +D F +DANTG IRT K LD E+ Y
Sbjct: 406 LAQDPDSTNSLVRYFINYNVEDDRFFNIDANTGTIRTTKVLDREETPWY 454
Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|109076759|ref|XP_001088306.1| PREDICTED: cadherin-18 isoform 2 [Macaca mulatta]
gi|297294025|ref|XP_002804363.1| PREDICTED: cadherin-18 [Macaca mulatta]
gi|355691232|gb|EHH26417.1| Cadherin-14 [Macaca mulatta]
Length = 790
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ I + G + K L+YEK++ Y
Sbjct: 289 KIKANDADTGSNADMTYSIINGDGMGIFSISTDKETREGILSLKKPLNYEKKKSY 343
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 353 HLDFRFSHLGPFKD------ATMLKIIVGDV-DEPPLFSMPSYVMEVYENAKIGTVVGTV 405
Query: 124 HATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D + V Y Y+ +D F +DANTG I+T K LD E+ Y
Sbjct: 406 LAQDPDSANSLVRYFINYNAEDDRFFNIDANTGTIKTTKVLDREETPWY 454
Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|332228097|ref|XP_003263228.1| PREDICTED: cadherin-18 isoform 1 [Nomascus leucogenys]
Length = 790
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ I + G + K L+YEK++ Y
Sbjct: 289 KIKANDADTGSNADMTYSIINGDGMGIFSISTDKETREGILSLKKPLNYEKKKSY 343
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 353 HLDFRFSHLGPFKD------ATMLKIIVGDV-DEPPLFSMPSYVMEVYENAKIGTVVGTV 405
Query: 124 HATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D + V Y Y+V +D F +DANTG I+T K LD E+ Y
Sbjct: 406 LAQDPDSTNSLVRYFINYNVEDDRFFNIDANTGTIKTTKVLDREETPWY 454
Score = 36.2 bits (82), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|426385074|ref|XP_004059058.1| PREDICTED: cadherin-18 [Gorilla gorilla gorilla]
Length = 790
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ I + G + K L+YEK++ Y
Sbjct: 289 KIKANDADTGSNADMTYSIINGDGMGIFSISTDKETREGILSLKKPLNYEKKKSY 343
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 353 HLDFRFSHLGPFKD------ATMLKIIVGDV-DEPPLFSMPSYVMEVYENAKIGTVVGTV 405
Query: 124 HATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D + V Y Y+V +D F +DANTG IRT K LD E+ Y
Sbjct: 406 LAQDPDSTNSLVRYFINYNVEDDRFFNIDANTGTIRTTKVLDREETPWY 454
Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|73953950|ref|XP_546374.2| PREDICTED: cadherin-18 isoform 1 [Canis lupus familiaris]
Length = 790
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ I + G + K L+YEK++ Y
Sbjct: 289 KIKANDADTGSNADMTYSIINGDGIGIFSISTDKETREGILSLKKPLNYEKKKSY 343
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 353 HLDFRFSHLGPFKD------ATMLKIIVGDV-DEPPLFSMPSYVMEVYENAKIGTVVGTV 405
Query: 124 HATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D + V Y YS +D F +DANTG IRT K LD E+ Y
Sbjct: 406 LAQDPDSANSLVRYFIDYSAEDDRCFNIDANTGTIRTTKVLDREETPWY 454
Score = 36.2 bits (82), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|380786417|gb|AFE65084.1| cadherin-18 isoform 1 preproprotein [Macaca mulatta]
Length = 790
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ I + G + K L+YEK++ Y
Sbjct: 289 KIKANDADTGSNADMTYSIINGDGMGIFSISTDKETREGILSLKKPLNYEKKKSY 343
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 353 HLDFRFSHLGPFKD------ATMLKIIVGDV-DEPPLFSMPSYIMEVYENAKIGTVVGTV 405
Query: 124 HATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D + V Y Y+ +D F +DANTG I+T K LD E+ Y
Sbjct: 406 LAQDPDSANSLVRYFINYNAEDDRFFNIDANTGTIKTTKVLDREETPWY 454
Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|395735679|ref|XP_002815500.2| PREDICTED: cadherin-18 [Pongo abelii]
Length = 781
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 164 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 219
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 220 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 279
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ I + G + K L+YEK++ Y
Sbjct: 280 KIKANDADTGSNADMTYSIINGDGMGIFSISTDKETREGILSLKKPLNYEKKKSY 334
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 138 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 197
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 198 YFSVDPKTGVIRTALHNMDREAREHY 223
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 344 HLDFRFSHLGPFKD------ATMLKIIVGDV-DEPPLFSMPSYVMEVYENAKIGTVVGTV 396
Query: 124 HATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D + V Y Y+V +D F +DANTG I+T K LD E+ Y
Sbjct: 397 LAQDPDSTNSLVRYFINYNVEDDRFFNIDANTGTIKTTKVLDREETPWY 445
>gi|332228099|ref|XP_003263229.1| PREDICTED: cadherin-18 isoform 2 [Nomascus leucogenys]
Length = 574
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ I + G + K L+YEK++ Y
Sbjct: 289 KIKANDADTGSNADMTYSIINGDGMGIFSISTDKETREGILSLKKPLNYEKKKSY 343
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 353 HLDFRFSHLGPFKD------ATMLKIIVGDV-DEPPLFSMPSYVMEVYENAKIGTVVGTV 405
Query: 124 HATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D + V Y Y+V +D F +DANTG I+T K LD E+ Y
Sbjct: 406 LAQDPDSTNSLVRYFINYNVEDDRFFNIDANTGTIKTTKVLDREETPWY 454
Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|60551183|gb|AAH90908.1| Cadherin 6 [Danio rerio]
Length = 794
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 86/187 (45%), Gaps = 33/187 (17%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---- 70
D Y A + +G + QV A D D FG +L + + YF+++P T
Sbjct: 155 DKEVYTASVPEGSHIGTFVTQVTAQDADDEMFGY-SAKLAYSIKEGHPYFSVEPNTGIIR 213
Query: 71 -------------EHQGPIQD-------EGGLSSTATVNIRVTDINDKNPEFQSLPYEFS 110
EH + + +GGL + TVNI +TDIND P F+ Y+FS
Sbjct: 214 TALGPTDMDREQREHYQVVIEAKDMAGQKGGLIGSTTVNISLTDINDNAPHFKQGIYQFS 273
Query: 111 VPE-GQDGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALD 162
VPE + G +VGR+ A D D G+NA + YS+ DI + G + K LD
Sbjct: 274 VPELTKVGSSVGRIEAEDVDIGRNAEMSYSITGGDSLDVFDISTDRNTQEGILTVKKPLD 333
Query: 163 YEKQQLY 169
YEK++ Y
Sbjct: 334 YEKKKSY 340
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
+++ DIND P+F Y SVPEG G V +V A DAD+ G +A + YS+ E P
Sbjct: 142 VKLHDINDNEPKFDKEVYTASVPEGSHIGTFVTQVTAQDADDEMFGYSAKLAYSIKEGHP 201
Query: 146 -FVVDANTGDIRTNKA---LDYEKQQLY 169
F V+ NTG IRT +D E+++ Y
Sbjct: 202 YFSVEPNTGIIRTALGPTDMDREQREHY 229
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G + +G++H +D D G V+Y E FV+DAN+GD+ ++LD E++ Y
Sbjct: 63 GSEHQYIGKLH-SDMDRGDGTVMYVLTGEGAGTIFVIDANSGDLHATRSLDREEKPSYSL 121
Query: 172 RVFLISK 178
R +++
Sbjct: 122 RAQAVNR 128
>gi|344272202|ref|XP_003407924.1| PREDICTED: cadherin-18-like [Loxodonta africana]
Length = 790
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ I + G + K L+YEK++ Y
Sbjct: 289 KIKANDADTGSNADMTYSIINGDGVGIFSISTDKETREGILSLKKPLNYEKKKSY 343
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 52/110 (47%), Gaps = 13/110 (11%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLP-YEFSVPE-GQDGLAVGR 122
+LD H GP +D + I V D+++ P S+P Y V E + G VG
Sbjct: 353 HLDFRFSHLGPFKD------ATMLKIIVGDVDE--PPLFSMPFYVMEVFENAKIGTIVGT 404
Query: 123 VHATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V A D D + V Y YS +D F + ANTG I+T K LD E+ Y
Sbjct: 405 VLAQDPDSANSLVRYFIDYSAEDDRFFNIGANTGIIKTTKILDREETPWY 454
Score = 36.2 bits (82), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|410949759|ref|XP_003981585.1| PREDICTED: cadherin-18 isoform 1 [Felis catus]
Length = 790
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ I + G + K L+YEK++ Y
Sbjct: 289 KIKANDADTGSNADMTYSIINGDGIGIFSISTDKETREGILSLKKPLNYEKKKSY 343
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 353 HLDFRFSHLGPFKD------ATMLKIIVGDV-DEPPLFSMPSYVMEVYENAKIGTVVGTV 405
Query: 124 HATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D + V Y+ S +D F +DAN+G IRT K LD E+ Y
Sbjct: 406 LAQDPDSANSLVRYFIDHSGEDDRVFNIDANSGTIRTTKVLDREETPWY 454
Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|395833104|ref|XP_003789585.1| PREDICTED: cadherin-18-like [Otolemur garnettii]
Length = 790
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ I + G + K L+YEK++ Y
Sbjct: 289 KIKANDADTGSNADMTYSIINGDGVGVFSISTDKETREGILSLKKPLNYEKKKSY 343
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 353 HLDFRFSHLGPFKD------ATMLKIIVGDV-DEPPLFSMPSYVMEVYENAKIGTIVGTV 405
Query: 124 HATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D + V Y Y+ ++ F +DANTG I+T K LD E+ Y
Sbjct: 406 LAQDPDSANSLVRYFINYNAEDERFFNIDANTGTIKTTKVLDREETPWY 454
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 53/127 (41%), Gaps = 23/127 (18%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPI- 76
++G + V A D DS LV Y ++ N + +FN+D T + P
Sbjct: 397 KIGTIVGTVLAQDPDSAN-SLVRY-FINYNAEDERFFNIDANTGTIKTTKVLDREETPWY 454
Query: 77 --------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
D GL S TV IRV D+ND PE Y+ V E + G + + ATD
Sbjct: 455 NITVAASENDNPGLLSHVTVGIRVLDVNDNPPELAK-EYDIVVCENSKPGQVIHTISATD 513
Query: 128 ADEGQNA 134
D+ N
Sbjct: 514 KDDFANG 520
Score = 36.2 bits (82), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|149732826|ref|XP_001501105.1| PREDICTED: cadherin-18-like [Equus caballus]
Length = 790
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ I + G + K L+YEK++ Y
Sbjct: 289 KIKANDADTGSNADMTYSIINGDGVGIFSISTDKETREGILSLKKPLNYEKKKSY 343
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 353 HLDFRFSHLGPFKD------ATMLKIIVGDV-DEPPLFSMPSYVMEVYENAKIGTVVGTV 405
Query: 124 HATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D + V Y Y+ +D F +DANTG I+T K LD E+ Y
Sbjct: 406 LAQDPDSANSLVRYFIEYNAEDDRFFNIDANTGIIKTTKVLDREETPWY 454
Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 54/127 (42%), Gaps = 23/127 (18%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPI- 76
++G + V A D DS LV Y ++ N + +FN+D T + P
Sbjct: 397 KIGTVVGTVLAQDPDSAN-SLVRY-FIEYNAEDDRFFNIDANTGIIKTTKVLDREETPWY 454
Query: 77 --------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
+D GL S V IRV D+ND PE + Y+ V E + G + + ATD
Sbjct: 455 NITVAASEKDNPGLLSHVAVGIRVLDVNDNPPEL-AREYDIVVCENSKPGQVIHTISATD 513
Query: 128 ADEGQNA 134
D+ N
Sbjct: 514 KDDFANG 520
Score = 36.2 bits (82), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|116003895|ref|NP_001070305.1| cadherin-18 precursor [Bos taurus]
gi|122132281|sp|Q08DJ5.1|CAD18_BOVIN RecName: Full=Cadherin-18; Flags: Precursor
gi|115304961|gb|AAI23715.1| Cadherin 18, type 2 [Bos taurus]
gi|296475698|tpg|DAA17813.1| TPA: cadherin-18 precursor [Bos taurus]
Length = 790
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ I + G + K L+YEK++ Y
Sbjct: 289 KIKANDADTGSNADMTYSIINGDGVGIFSISTDKETREGILSLKKPLNYEKKKSY 343
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 353 HLDFRFSHLGPFKD------ATMLKIIVGDV-DEPPLFSMPSYVMEVYENAKIGTVVGTV 405
Query: 124 HATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D + V Y Y+ +D F +DANTG I+T K LD E+ Y
Sbjct: 406 LAQDPDSANSLVRYFIDYNAEDDRFFNIDANTGTIKTTKVLDREETPWY 454
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 53/127 (41%), Gaps = 23/127 (18%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPI- 76
++G + V A D DS LV Y +D N + +FN+D T + P
Sbjct: 397 KIGTVVGTVLAQDPDSAN-SLVRY-FIDYNAEDDRFFNIDANTGTIKTTKVLDREETPWY 454
Query: 77 --------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
D L S TV IRV D+ND PE + Y+ V E + G + + ATD
Sbjct: 455 NITVAASENDNPSLLSHVTVGIRVLDVNDNPPEL-AREYDIVVCENSKPGQVIHTISATD 513
Query: 128 ADEGQNA 134
D+ N
Sbjct: 514 KDDFANG 520
Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|241758144|ref|XP_002401744.1| conserved hypothetical protein [Ixodes scapularis]
gi|215508485|gb|EEC17939.1| conserved hypothetical protein [Ixodes scapularis]
Length = 2750
Score = 73.6 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 56/179 (31%), Positives = 83/179 (46%), Gaps = 30/179 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAA---------------- 61
Y A R+ G T++ V+ATD+D+G V+Y +L+ + T+ A
Sbjct: 329 YEASIRESVPTGFTVLTVRATDQDTGSNANVDYSILNPDGTNGAFGIDSKSGIITTRSSL 388
Query: 62 -----SYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
S++ L GP+ D S++ATV I V D ND P+F Y V E +
Sbjct: 389 DRELTSFYALVVQATDSGPVTDRK--SASATVQITVLDENDNYPQFSERSYSVKVSEDVN 446
Query: 117 GL---AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
L V R+ ATD+D+G NA + YS+ F +D+ TG + LDYE + Y
Sbjct: 447 WLNHPEVARIRATDSDQGANAALRYSLIGGNTQGHFAMDSLTGSVTVLSPLDYESARSY 505
Score = 69.3 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVV 136
D GG S +ATV + V+D N P F+ PY S+PE G V V A D D G+NA+V
Sbjct: 724 DSGGRSDSATVYLNVSDANTHRPTFERTPYTASIPEDVPVGTTVLVVEARDGDVGRNALV 783
Query: 137 YYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
Y++ ED+P F +D ++G + T + LD E+
Sbjct: 784 TYTLEEDVPEFRMDPSSGSLVTARPLDRER 813
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 48/155 (30%), Positives = 77/155 (49%), Gaps = 26/155 (16%)
Query: 35 QVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------EHQGP--------IQ 77
+++ATD D G + Y L+ NT +F +D T +++ +Q
Sbjct: 455 RIRATDSDQGANAALRYSLIGGNTQG--HFAMDSLTGSVTVLSPLDYESARSYRLVVRVQ 512
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNA 134
D G S+T + + V DIND +P+F + + +VPE G ++ RV A DAD+G NA
Sbjct: 513 DGGTPSRSNTTQLLVNVLDINDNDPKFYTSLFHETVPENVPVGHSIVRVQAYDADDGANA 572
Query: 135 VVYYSVPE----DIPFVVDANTGDIRTNKALDYEK 165
+ Y++ D+P VD TG + T + LD E+
Sbjct: 573 EISYTLSSSERPDLPLNVDDVTGWVSTTRQLDREE 607
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 55/184 (29%), Positives = 81/184 (44%), Gaps = 28/184 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G T++ V+A D D G+ LV Y L ++ + F +DP++
Sbjct: 753 YTASIPEDVPVGTTVLVVEARDGDVGRNALVTYTLEEDVPE----FRMDPSSGSLVTARP 808
Query: 71 ---EHQG------PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
E G QD G LS T V + + D+ND P F + Y +V E G
Sbjct: 809 LDRERVGGYTLVVAAQDGGNPPLSDTTNVELEIADVNDNTPVFPTAGYTSTVSEDALVGT 868
Query: 119 AVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
+V V A DAD G N + Y+ F +D +G +RTN+ALD E Y F
Sbjct: 869 SVAHVSALDADLGLNGQIRYTFLGGNDGGGAFGIDPTSGIVRTNRALDRETVAAYHLVAF 928
Query: 175 LISK 178
+ +
Sbjct: 929 AVDR 932
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV- 140
++T+T+ + V D ND P F+ YE S+ E G V V ATD D G NA V YS+
Sbjct: 305 TATSTLQVNVLDENDHAPTFEQATYEASIRESVPTGFTVLTVRATDQDTGSNANVDYSIL 364
Query: 141 -PEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
P+ F +D+ +G I T +LD E Y
Sbjct: 365 NPDGTNGAFGIDSKSGIITTRSSLDRELTSFY 396
Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 94 DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVD 149
D+ND P F + VPE G G V A D DEG NAVV Y++ P+ F +
Sbjct: 949 DVNDSPPRFSADRIRLFVPENSPVGSVAGEVQAHDPDEGPNAVVQYAIVGGPDADAFSLV 1008
Query: 150 ANTG---DIRTNKALDYEKQQ 167
A G +I T LDYE ++
Sbjct: 1009 ARPGEAAEIVTRTELDYESRR 1029
Score = 42.7 bits (99), Expect = 0.057, Method: Composition-based stats.
Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 41/182 (22%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEY------------------------RLLDNNTDAASYF 64
+G ++++V+A D D G + Y R LD A+ F
Sbjct: 554 VGHSIVRVQAYDADDGANAEISYTLSSSERPDLPLNVDDVTGWVSTTRQLDREESASFNF 613
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRV 123
+ A +H P + S+TA++ +RV D+ND +P F+ YE +V E G V V
Sbjct: 614 QV-VARDHGTPSR-----SATASILLRVQDVNDNDPVFEPRTYEATVSEADPPGTPVVSV 667
Query: 124 HATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKF 179
A+D DE + +VY + E V + + LDY+ LER F++
Sbjct: 668 TASDRDE-HSRLVYQIASGNTRERFGIVSHNRQAVVSVAQPLDYK-----LERRFVLVVT 721
Query: 180 AT 181
AT
Sbjct: 722 AT 723
>gi|432094189|gb|ELK25864.1| Cadherin-18 [Myotis davidii]
Length = 790
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ I + G + K L+YEK++ Y
Sbjct: 289 KIKANDADTGSNADMTYSIINGDGIGIFSISTDKETREGILSLKKPLNYEKKKSY 343
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 353 HLDFRFSHLGPFKD------ATMLKIIVGDV-DEPPLFSMPSYIMEVYENAKVGTVVGAV 405
Query: 124 HATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D + V Y Y+ +D F +DANTG I+T K LD E+ Y
Sbjct: 406 LAQDPDSANSLVRYFIDYNAEDDRFFNIDANTGSIKTTKVLDREETPWY 454
Score = 39.3 bits (90), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 54/127 (42%), Gaps = 23/127 (18%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPI- 76
++G + V A D DS LV Y +D N + +FN+D T + P
Sbjct: 397 KVGTVVGAVLAQDPDSAN-SLVRY-FIDYNAEDDRFFNIDANTGSIKTTKVLDREETPWY 454
Query: 77 --------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
D GL S TV IRV D+ND PE + Y+ V E + G + + ATD
Sbjct: 455 NITVAASENDNPGLLSHVTVGIRVLDVNDNPPEL-AREYDIVVCENSKPGQVIHTISATD 513
Query: 128 ADEGQNA 134
D+ N
Sbjct: 514 KDDFANG 520
Score = 36.2 bits (82), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|291395171|ref|XP_002714124.1| PREDICTED: cadherin 18, type 2 [Oryctolagus cuniculus]
Length = 790
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ I + G + K L+YEK++ Y
Sbjct: 289 KIKANDADTGSNADMTYSIINGDGVGVFSISTDKETREGILSLKKPLNYEKKKSY 343
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 50/109 (45%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 353 HLDFRFSHLGPFKD------ATVLKIIVGDV-DEAPLFSMPSYVMEVYENAKIGTTVGTV 405
Query: 124 HATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D + V Y Y +D F +DANTG I+T K LD E+ Y
Sbjct: 406 LAQDPDSANSLVRYFINYDTEDDRFFNIDANTGTIKTTKVLDREETPWY 454
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 56/127 (44%), Gaps = 23/127 (18%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPI- 76
++G T+ V A D DS LV Y ++ +T+ +FN+D T + P
Sbjct: 397 KIGTTVGTVLAQDPDSAN-SLVRY-FINYDTEDDRFFNIDANTGTIKTTKVLDREETPWY 454
Query: 77 --------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
D GL S TV IRV D+ND PE + Y+ V E + G + + ATD
Sbjct: 455 NITVAASENDNPGLLSHVTVGIRVLDVNDNPPEL-AREYDIVVCENAKPGQVIHTISATD 513
Query: 128 ADEGQNA 134
D+ N
Sbjct: 514 KDDFANG 520
Score = 36.2 bits (82), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|195575605|ref|XP_002077668.1| GD22944 [Drosophila simulans]
gi|194189677|gb|EDX03253.1| GD22944 [Drosophila simulans]
Length = 3038
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 31/182 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD----------NNTDAASYFNLDP 68
Y + + ++QV A+D D+G + YR++D +++D + +F + P
Sbjct: 1041 YSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFP 1100
Query: 69 ATEH---QGPI----QDEGGLSSTATVN------------IRVTDINDKNPEFQSLPYEF 109
+ + P+ +D L+ AT N +RV D ND +P+FQ YEF
Sbjct: 1101 NSGWIYLRAPLDREARDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEF 1160
Query: 110 SVPEG-QDGLAVGRVHATDADEGQNAVVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQ 167
+ E + G VG V A+D D G+NA + YS +P + F V TG+I T + LD E ++
Sbjct: 1161 RIEENLRRGSVVGVVTASDLDLGENAAIRYSLLPINSSFQVHPVTGEISTREPLDRELRE 1220
Query: 168 LY 169
LY
Sbjct: 1221 LY 1222
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 24/176 (13%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + + G +++QV A D+D G + Y L + A +F +DP T
Sbjct: 508 LYHANVMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRS 567
Query: 71 ---------EHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ +GG LSSTATV + + D+ND P F Y SV E + G
Sbjct: 568 HIDCETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVG 627
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
+ +V A+D D G NA+V Y++ E F V + +G+I LD+E++ Y
Sbjct: 628 RCILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSY 683
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV----- 140
TVNI + D+ND P F Y +VPE G +V +V+A+D D +N +V Y++
Sbjct: 271 TVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQS 330
Query: 141 PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ F +D TG I NKALD+E ++L+
Sbjct: 331 DKEQMFRIDPRTGAIYINKALDFETKELH 359
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 77/168 (45%), Gaps = 33/168 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI---------- 76
G + V A+D D G+ + Y LL N S F + P T + P+
Sbjct: 1169 GSVVGVVTASDLDLGENAAIRYSLLPIN----SSFQVHPVTGEISTREPLDRELRELYDL 1224
Query: 77 ----QDEGGLSSTATVNIR--VTDINDKNPEFQSLPYE--FSVPEGQD-GLAVGRVHATD 127
+D+G +A V +R V+D+ND PE P E SV E Q G V RV A D
Sbjct: 1225 VVEARDQGTPVRSARVPVRIHVSDVNDNAPEIAD-PQEDVVSVREEQPPGTEVVRVRAVD 1283
Query: 128 ADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
D GQNA + YS+ + F +D +G IRT LD+E++ +Y
Sbjct: 1284 RDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHEERSIY 1331
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
VNI V D+ND PEF++ SVPE + G + HA D D G + V YS+ +D
Sbjct: 917 VNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKDSGK 976
Query: 146 --FVVDANTGDIRTNKALDYEKQQLY 169
F +DA +G + ++ LDYE Q +
Sbjct: 977 GLFAIDARSGHLILSQHLDYESSQRH 1002
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 71/164 (43%), Gaps = 28/164 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------------HQGPIQ--- 77
++ V ATD D G FG V YR++ N A F +D +T P+
Sbjct: 739 IVAVVATDPDYGNFGQVSYRIVAGN--EAGIFRIDRSTGEIFVVRPDMLSVRTQPMHMLN 796
Query: 78 ----DEGGLSSTA--TVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADE 130
D G L S A V + + D + P F+ Y + V E G VG V A D
Sbjct: 797 ISATDGGNLRSNADAVVFLSIIDAMQRPPIFEKARYNYYVKEDIPRGTVVGSVIAASGDA 856
Query: 131 GQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYE-KQQLYL 170
+ V YS+ P F ++ N+G+IR K LD+E K Q+ L
Sbjct: 857 AHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLL 900
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 25/166 (15%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY--------------RLLDNNTDA 60
D FY + +G +++V A+D D G +V Y R
Sbjct: 612 DQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEICI 671
Query: 61 ASYFNLDPATEHQGPI--QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV------P 112
A + + + ++ P+ D GGLS+TA + +++TD+ND P F Y+ S+ P
Sbjct: 672 AGELDFERRSSYEFPVLATDRGGLSTTAMIKMQLTDVNDNRPVFYPREYKVSLRESPKAP 731
Query: 113 EGQDGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
+ V ATD D G V Y + E F +D +TG+I
Sbjct: 732 SQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGIFRIDRSTGEI 777
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+S A + I + D ND +P+F + +V EG + G V +VHA D+D G NA + Y +
Sbjct: 2319 LASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHI 2378
Query: 141 PE---DIPFVVD-ANTGDIRTNKALDYEKQQLYLERVF 174
+ D FV++ A +G +RTN LD E + +Y ++
Sbjct: 2379 VDGNHDNAFVIEPAFSGIVRTNIVLDREIRDIYKLKII 2416
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L ++ ++ +R+TD+ND +PEF+ Y +V E D G +V +V A D DEG N+ + YS+
Sbjct: 484 LHASKSIFLRITDVNDNSPEFEQDLYHANVMEVADPGTSVLQVLAHDRDEGLNSALTYSL 543
Query: 141 PEDIP------FVVDANTGDIRTNKALDYEKQ 166
E P F +D TG I T +D E +
Sbjct: 544 AE-TPETHAQWFQIDPQTGLITTRSHIDCETE 574
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 80/192 (41%), Gaps = 50/192 (26%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y ++ LG +++Q+ A D D G V RL+ ++L T+ Q I
Sbjct: 1974 YTGSVQEDAPLGTSVVQISAVDADLG----VNARLV---------YSLANETQWQFAIDS 2020
Query: 79 EGGL------------------------------SSTATVNIRVTDINDKNPEFQSLPYE 108
+ GL S+T V I V DIND P F+ PY
Sbjct: 2021 QSGLITTVGKLDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPVFERYPYI 2080
Query: 109 FSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPED-----IPFVVDANTGDIRTNKALD 162
VP Q G + +V A DAD G NA + YS+ + F ++ +TG + +++L
Sbjct: 2081 GQVPALIQPGQTLLKVQALDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSASQSLA 2140
Query: 163 YEKQQ-LYLERV 173
E + L+LE V
Sbjct: 2141 SESGKLLHLEVV 2152
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 22/145 (15%)
Query: 18 FYGAMAR----DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN------TDAAS----- 62
F +M R + ELG L A DKDSG G V Y L+ ++ DA S
Sbjct: 931 FEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKDSGKGLFAIDARSGHLIL 990
Query: 63 --YFNLDPATEHQGPIQDEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ + + + H + G LS+ T+ + V D+ND P F+ Y +V E +
Sbjct: 991 SQHLDYESSQRHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKEEYSVNVSESRS 1050
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV 140
+ +V+A+D D G NA + Y +
Sbjct: 1051 INAQIIQVNASDLDTGNNARITYRI 1075
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 60/148 (40%), Gaps = 23/148 (15%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLD----PATEHQGPIQDEGGLSSTATVNIRVT 93
A D D LV RLLD + S F L+ T P SS TV I V
Sbjct: 1444 AFDIDRHSGNLVVARLLDR--EVQSEFRLEIRALDTTATNNP------QSSAITVKIEVA 1495
Query: 94 DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------- 145
D+ND PE+ P + V E G + ATDAD G N + Y + P
Sbjct: 1496 DVNDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQE 1555
Query: 146 ---FVVDANTGDIRTNKALDYEKQQLYL 170
F +D+ TG + LD+E Q YL
Sbjct: 1556 QAIFSMDSLTGALSLQAPLDFEAVQEYL 1583
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 86 ATVNIRVTDINDKNPEFQ-SLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
AT+ I V D+ND +PEF+ Y SVPE + + V A+D DEG NA + YS+
Sbjct: 1848 ATIYITVGDVNDNSPEFRPGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITGGN 1907
Query: 143 -DIPFVVDANTGDIRTNKALDYEKQQLY 169
F +D+ +G++ + + LD E+ Y
Sbjct: 1908 LGNKFSIDSRSGEL-SARPLDREQNSRY 1934
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 19/101 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------- 71
Y A + +G +++QV A+D D+ + GLVEY + +D F +DP T
Sbjct: 291 YFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAIYINKA 350
Query: 72 --------HQGPI--QDEGG--LSSTATVNIRVTDINDKNP 100
H+ + +D G L +TA V+IRVTD+ND P
Sbjct: 351 LDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQP 391
Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 38/182 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
+ A + + G + QV A D D+G + Y ++D N D A F ++PA G ++
Sbjct: 2344 FVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHDNA--FVIEPA--FSGIVRT 2399
Query: 78 -------------------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEF-SVPEGQ 115
DEG ++ TAT+ +++ D+ND P F P +V E
Sbjct: 2400 NIVLDREIRDIYKLKIIASDEGVPQMTGTATIRVQIVDVNDNQPTFP--PNNLVTVSEAT 2457
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE---DIP----FVVDANTGDIRTNKALDYEKQQ 167
+ G + + A D D A+ Y E DI F +D +G + + LDYE QQ
Sbjct: 2458 ELGAVITSISANDVDT-YPALTYRLGAESTVDIENMSIFALDRYSGKVVLKRRLDYELQQ 2516
Query: 168 LY 169
Y
Sbjct: 2517 EY 2518
Score = 42.7 bits (99), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI 144
+ I V D ND P F+ Y SV E G +V ++ A DAD G NA + YS+ +
Sbjct: 1953 CNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLANET 2012
Query: 145 --PFVVDANTGDIRTNKALDYEKQQLY 169
F +D+ +G I T LD E Q Y
Sbjct: 2013 QWQFAIDSQSGLITTVGKLDRELQASY 2039
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 58/134 (43%), Gaps = 22/134 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--FNLDPAT---------------- 70
+G ++ + A+D D G FG + Y + +D +S+ F +D +
Sbjct: 2894 VGSSVFRAHASDLDKGPFGQLNYSIGPVPSDESSWKMFRVDSESGLVTSAFVFDYEQRQR 2953
Query: 71 -EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG---QDGLAVGRVHAT 126
+ + D GG ++ V + + ++ P+F Y F +P G VG+V AT
Sbjct: 2954 YDMELLASDMGGKKASVAVRVEIESRDEFTPQFTERTYRFVLPAAVALPQGYVVGQVTAT 3013
Query: 127 DADEGQNAVVYYSV 140
D+D G + V Y +
Sbjct: 3014 DSDSGPDGRVVYQL 3027
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 16/126 (12%)
Query: 54 LDNNTDAASYFNLDPA--TEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
LD ++ A SY + A + HQ P L S + + D ND P+F Y +
Sbjct: 2835 LDYDSGAKSYELIIQACDSHHQRP------LCSLQPFRLELHDENDNEPKFPLSEYVHFL 2888
Query: 112 PEGQD-GLAVGRVHATDADEGQNAVVYYS---VPEDIP----FVVDANTGDIRTNKALDY 163
E + G +V R HA+D D+G + YS VP D F VD+ +G + + DY
Sbjct: 2889 AENEPVGSSVFRAHASDLDKGPFGQLNYSIGPVPSDESSWKMFRVDSESGLVTSAFVFDY 2948
Query: 164 EKQQLY 169
E++Q Y
Sbjct: 2949 EQRQRY 2954
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 67/170 (39%), Gaps = 37/170 (21%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLD-----NNTDAASYFNLDPAT---EHQGPIQDEG 80
+G + ATD D+G G ++YRL+ N + + F++D T Q P+ E
Sbjct: 1519 VGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAIFSMDSLTGALSLQAPLDFEA 1578
Query: 81 -------------------GLSSTATVNIRVTDINDKNPEFQS-------LPYEFSVPEG 114
L ++ TV ++V D ND P+F S F
Sbjct: 1579 VQEYLLIVQALDQSSNVTERLQTSVTVRLQVLDANDNAPQFVSPNSSGGKTASLFISDAT 1638
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKAL 161
+ G V + A D D G N + Y + + F +++ TG I K+L
Sbjct: 1639 RIGEVVAHIVAVDEDSGDNGRLTYEITGGNGEGRFRINSQTGIIELVKSL 1688
Score = 35.8 bits (81), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 22/111 (19%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT---------EHQ 73
R++ G +++V+A D+D G+ + Y ++ ++D F++DP + +H+
Sbjct: 1267 REEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHE 1326
Query: 74 -------GPIQDEGGLSSTATVN---IRVTDINDKNPEF--QSLPYEFSVP 112
G +GG TV + V D+ND P F SL + S+P
Sbjct: 1327 ERSIYRLGVAASDGGSPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRCSLP 1377
>gi|326665089|ref|XP_001345711.4| PREDICTED: cadherin-11 [Danio rerio]
Length = 1184
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 85/186 (45%), Gaps = 43/186 (23%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV A+D D +G RL+ +F++DP T
Sbjct: 154 YSATVPEMANIGTSIIQVTASDADDPTYG-NSARLVYTLVQGQPHFSVDPQTGILRTAVP 212
Query: 71 EHQGPIQDE--------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
+ QD+ GGLS T TV +R+TD+ND P F + FSV E
Sbjct: 213 DLDREAQDQYLVVLQAKDMGGHLGGLSGTTTVTVRLTDVNDNPPRFVQSSWLFSVSELAV 272
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD------------IRTNKALDY 163
G VGR+ ATDAD G+NA + Y+ ++D +GD I NKA+DY
Sbjct: 273 PGAEVGRISATDADLGENAKLEYT-------ILDGESGDTFNISGANQEAVIILNKAVDY 325
Query: 164 EKQQLY 169
E + Y
Sbjct: 326 ESRSSY 331
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 72/141 (51%), Gaps = 24/141 (17%)
Query: 50 EYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF 109
EYRL+ TD+ + L+P+++ IRV DIND P F+ PY
Sbjct: 113 EYRLIATATDSQTERALEPSSQ----------------FIIRVQDINDNPPVFEEGPYSA 156
Query: 110 SVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP-FVVDANTGDIRTNKA-LDY 163
+VPE + G ++ +V A+DAD+ G +A + Y++ + P F VD TG +RT LD
Sbjct: 157 TVPEMANIGTSIIQVTASDADDPTYGNSARLVYTLVQGQPHFSVDPQTGILRTAVPDLDR 216
Query: 164 EKQQLYLERVFLISKFATSYL 184
E Q YL V L +K +L
Sbjct: 217 EAQDQYL--VVLQAKDMGGHL 235
>gi|195118208|ref|XP_002003632.1| GI18019 [Drosophila mojavensis]
gi|193914207|gb|EDW13074.1| GI18019 [Drosophila mojavensis]
Length = 2980
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 83/187 (44%), Gaps = 36/187 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA------TEH 72
Y + + ++QV A+D D+G + YR++D D AS + +H
Sbjct: 410 YAVNVSESRPINAQIIQVNASDLDTGNNARITYRIVDAGADNASQSLANAGGPDADLAQH 469
Query: 73 QGPIQDEGGL----------------------------SSTATVNIRVTDINDKNPEFQS 104
G + G + + A V +RV D ND +P+FQ
Sbjct: 470 FGIFPNSGWIYLRAALDRESRDRYELTVLATDNGTPAAHARARVLVRVLDANDNDPKFQR 529
Query: 105 LPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYS-VPEDIPFVVDANTGDIRTNKALD 162
YEF + E + G VG V A+DAD G+NA + YS +P + F V TG+I T + LD
Sbjct: 530 ESYEFRIEENLRRGAVVGVVSASDADLGENAAIRYSLLPANSSFQVHPVTGEISTREPLD 589
Query: 163 YEKQQLY 169
E ++LY
Sbjct: 590 RELRELY 596
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 79/168 (47%), Gaps = 33/168 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI---------- 76
G + V A+D D G+ + Y LL N S F + P T + P+
Sbjct: 543 GAVVGVVSASDADLGENAAIRYSLLPAN----SSFQVHPVTGEISTREPLDRELRELYDL 598
Query: 77 ----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYE--FSVPEGQD-GLAVGRVHATD 127
+D+G S+ A V + VTD+ND PE P E SV E Q G V R+ A D
Sbjct: 599 MVEARDQGTPTRSARAPVRVHVTDVNDNAPEIAD-PQEDVVSVREEQPPGTEVVRIRAID 657
Query: 128 ADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
D GQNA + YS+ + F +DANTG IRT LD+E++ +Y
Sbjct: 658 RDHGQNASINYSLLKGRDSDGHGLFSIDANTGVIRTRVVLDHEERSIY 705
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 70/158 (44%), Gaps = 25/158 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--FNLDPAT---------------- 70
LG ++ + A+D D G FG + Y L+ D +S+ F +D AT
Sbjct: 2278 LGSSVFRAHASDLDRGAFGQLNYSLVAAPGDDSSWRLFRVDAATGIVSSGAVFDYEQRQR 2337
Query: 71 -EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD---GLAVGRVHAT 126
Q D GG S+ V + + ++ P+F Y F++P G VG+V AT
Sbjct: 2338 YNLQLRASDMGGRSARVAVRVEIESRDEFTPQFTERTYRFALPASTALPLGFVVGQVTAT 2397
Query: 127 DADEGQNAVVYY--SVPEDIPFVVDANTGDIRTNKALD 162
DAD G + V Y S P F V+ ++G + + LD
Sbjct: 2398 DADSGADGRVVYQLSAPHS-HFKVNRSSGAVLIKRKLD 2434
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 37/169 (21%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------EHQGPIQDEGGLSSTA 86
V AT D+ + V Y + + D YF+++PA+ +H+ Q + +T+
Sbjct: 205 VIATSSDTAQRSPVRYSIYSGDPDG--YFSIEPASGNIRIARPLDHEAKAQVLLNIQATS 262
Query: 87 ---------TVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVV 136
VNI V D+ND PEF++ SVPE + G + HA D D G + V
Sbjct: 263 GDPPVYGHTQVNIEVEDVNDNAPEFETSMVRISVPENAELGTPLFAAHAHDKDSGSSGQV 322
Query: 137 YYSVPEDIP----------------FVVDANTGDIRTNKALDYEKQQLY 169
YS+ + F +DA +G + ++ LDYE Q +
Sbjct: 323 TYSITGNANATQPGRGKAQPTGAALFAIDARSGHLVLSRHLDYETAQRH 371
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 74/164 (45%), Gaps = 28/164 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V ATD D+G FG V YR++ N F +D A+ ++
Sbjct: 95 IVAVVATDPDAGSFGQVSYRIVAGNE--GGIFRIDRASGEIFVVRPDMLSVRTQAMHILN 152
Query: 78 ----DEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADE 130
D GGL S+ A V + + D + P F+ Y + V E VG V AT +D
Sbjct: 153 ISATDGGGLRTSTDAVVFLSIIDAMQRPPIFEKARYNYYVKEDVPRNTVVGSVIATSSDT 212
Query: 131 GQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYE-KQQLYL 170
Q + V YS+ P F ++ +G+IR + LD+E K Q+ L
Sbjct: 213 AQRSPVRYSIYSGDPDGYFSIEPASGNIRIARPLDHEAKAQVLL 256
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 86 ATVNIRVTDINDKNPEFQ-SLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
AT+ I + D+ND PEF+ Y SVPE + + V A+D DEG NA + YS+
Sbjct: 1214 ATLIISIGDVNDNAPEFRPGSCYGLSVPENSESSVIHTVVASDLDEGVNAEIVYSIIGGN 1273
Query: 143 -DIPFVVDANTGDIRTNKALDYEKQQLY 169
F +DA TG++ + + LD E+ Y
Sbjct: 1274 LGNKFSIDARTGEL-SARPLDREQHARY 1300
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
LSS A + + + D ND +P+F + + EG G V +V A DADEG NA + Y +
Sbjct: 1695 LSSYAELVVELEDENDNSPQFSQRQFVATAWEGNSKGTFVAQVQAFDADEGANARLRYHI 1754
Query: 141 PE---DIPFVVD-ANTGDIRTNKALDYEKQQLYLERVF 174
+ D FV++ A +G +RTN LD E + +Y ++
Sbjct: 1755 VDGNHDNAFVIEPAFSGIVRTNIVLDREIRDVYSLKII 1792
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 59/129 (45%), Gaps = 8/129 (6%)
Query: 44 GKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQ 103
+ G + R LD A L A++ PI +G +++ V D ND P F
Sbjct: 1282 ARTGELSARPLDREQHARYTLQLQ-ASDRGQPITHQG----HCNISVFVEDQNDNEPHFD 1336
Query: 104 SLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKA 160
Y SVPE G +V R++A DAD G N+ + YS+ + F +D +G I T
Sbjct: 1337 QPKYVASVPENAAIGSSVLRINARDADLGVNSKLVYSLANETQWQFAIDGTSGLITTVGK 1396
Query: 161 LDYEKQQLY 169
LD E Q Y
Sbjct: 1397 LDRELQASY 1405
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVP 141
SS+ V I V D+ND P F+ PY VP Q G + +V A DAD+G N V Y++
Sbjct: 1421 SSSVAVQINVLDVNDNKPVFERYPYTGQVPALIQPGQTLLKVQAHDADQGANGDVLYALK 1480
Query: 142 ED---------IPFVVDANTGDIRTNKALDYEKQQL 168
D F ++ NTG + ++L E L
Sbjct: 1481 ADSTLTGAAMRSKFRINPNTGALSATQSLASETGNL 1516
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 40/183 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
+ A A + + G + QV+A D D G + Y ++D N D A F ++PA G ++
Sbjct: 1720 FVATAWEGNSKGTFVAQVQAFDADEGANARLRYHIVDGNHDNA--FVIEPA--FSGIVRT 1775
Query: 78 -------------------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYE-FSVPEGQ 115
DEG ++ T+T+ + + D+ND P F P SV EG
Sbjct: 1776 NIVLDREIRDVYSLKIIATDEGVPQMTGTSTIRVHIVDVNDNQPTFP--PNNVISVSEGT 1833
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPEDIP--------FVVDANTGDIRTNKALDYEKQ 166
+ G + + A D D + + Y + D P F +D +G + + LDYE Q
Sbjct: 1834 ELGAVIASLSANDVDTYPS--LTYRLGNDSPVERDNLMHFSIDRYSGKLVLKRRLDYELQ 1891
Query: 167 QLY 169
Q Y
Sbjct: 1892 QEY 1894
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 43/101 (42%), Gaps = 13/101 (12%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
SS TV I V D+ND P + P E V E G + ATDAD G N + Y +
Sbjct: 842 SSAITVKIEVADVNDNAPRWPLDPIELQVSESLPVGAIIHNFTATDADSGTNGELQYRLL 901
Query: 142 EDIP------------FVVDANTGDIRTNKALDYEKQQLYL 170
P F +D+ TG + LDYE Q YL
Sbjct: 902 RYSPQLNESLERTTPLFALDSLTGSLSLQAPLDYESLQEYL 942
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 57/124 (45%), Gaps = 12/124 (9%)
Query: 54 LDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
LD ++ A SY + A + P L S + + D ND P+F Y S+ E
Sbjct: 2219 LDYDSGATSYELIIRACDSHEPRP----LCSLQRFQLSLHDENDNAPQFPLAEYVHSLAE 2274
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIP----FVVDANTGDIRTNKALDYEK 165
+ G +V R HA+D D G + YS+ P D F VDA TG + + DYE+
Sbjct: 2275 NEPLGSSVFRAHASDLDRGAFGQLNYSLVAAPGDDSSWRLFRVDAATGIVSSGAVFDYEQ 2334
Query: 166 QQLY 169
+Q Y
Sbjct: 2335 RQRY 2338
Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 13/89 (14%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR--------VHATDAD 129
D GGLS+TA + +++TD+ND P F P E++V + G A G V ATD D
Sbjct: 47 DRGGLSTTAMIKLQLTDVNDNRPVF--YPREYNVSLRESGPAQGSGSSMPIVAVVATDPD 104
Query: 130 EGQNAVVYYSV---PEDIPFVVDANTGDI 155
G V Y + E F +D +G+I
Sbjct: 105 AGSFGQVSYRIVAGNEGGIFRIDRASGEI 133
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 35/158 (22%)
Query: 18 FYGAMAR----DKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-----------NTDAAS 62
F +M R + ELG L A DKDSG G V Y + N A+
Sbjct: 287 FETSMVRISVPENAELGTPLFAAHAHDKDSGSSGQVTYSITGNANATQPGRGKAQPTGAA 346
Query: 63 YFNLDPATEHQGPIQD----------------EGG---LSSTATVNIRVTDINDKNPEFQ 103
F +D + H + +GG LS+ T+ + V D+ND P F+
Sbjct: 347 LFAIDARSGHLVLSRHLDYETAQRHSLIVTATDGGLPPLSADLTILVDVQDVNDNPPVFE 406
Query: 104 SLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
Y +V E + + +V+A+D D G NA + Y +
Sbjct: 407 RDEYAVNVSESRPINAQIIQVNASDLDTGNNARITYRI 444
>gi|327276773|ref|XP_003223142.1| PREDICTED: cadherin-18-like [Anolis carolinensis]
Length = 790
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE + G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAKVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YSV I + G I K L+YEK++ Y
Sbjct: 289 KIKANDADTGSNADMKYSVINGDGSGVFTISTDKETREGIISLKKPLNYEKKKSY 343
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 353 HLDFRFSHLGPFKD------VTMLKIIVGDV-DEAPVFTLPSYIMDVHENARIGTIVGTV 405
Query: 124 HATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D N V Y+ ++ ED F +DANTG I+T K D E+ Y
Sbjct: 406 TAQDPDSANNLVRYFIDHNIEEDRYFTIDANTGTIKTAKVFDREETPWY 454
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD EK+ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREKKTHYV 125
>gi|402871213|ref|XP_003899572.1| PREDICTED: cadherin-18 [Papio anubis]
Length = 734
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 117 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 172
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 173 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 232
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ I + G + K L+YEK++ Y
Sbjct: 233 KIKANDADTGSNADMTYSIINGDGMGIFSISTDKETREGILSLKKPLNYEKKKSY 287
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 91 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 150
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 151 YFSVDPKTGVIRTALHNMDREAREHY 176
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 297 HLDFRFSHLGPFKD------ATMLKIIVGDV-DEPPLFSMPSYVMEVYENAKIGTVVGTV 349
Query: 124 HATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D + V Y Y+ +D F +DANTG I+T K LD E+ Y
Sbjct: 350 LAQDPDSANSLVRYFINYNAEDDRFFNIDANTGTIKTTKVLDREETPWY 398
>gi|350594180|ref|XP_003359779.2| PREDICTED: cadherin-18-like, partial [Sus scrofa]
Length = 716
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 99 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 154
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 155 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 214
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ I + G + K L+YEK++ Y
Sbjct: 215 KIKANDADTGSNADMTYSIINGDGIGIFSISTDKETREGILSLKKPLNYEKKKSY 269
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 73 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 132
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 133 YFSVDPKTGVIRTALHNMDREAREHY 158
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 279 HLDFRFSHLGPFKD------ATMLKIIVGDV-DEPPLFSMPSYVMEVYENAKIGTVVGTV 331
Query: 124 HATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D + V Y Y+ +D F +DANTG I+T K LD E+ Y
Sbjct: 332 LAQDPDSANSLVRYFIDYNAEDDRFFNIDANTGTIKTTKVLDREETPWY 380
Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 54/127 (42%), Gaps = 23/127 (18%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPI- 76
++G + V A D DS LV Y +D N + +FN+D T + P
Sbjct: 323 KIGTVVGTVLAQDPDSAN-SLVRY-FIDYNAEDDRFFNIDANTGTIKTTKVLDREETPWY 380
Query: 77 --------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
D GL S TV IRV D+ND PE + Y+ V E + G + + ATD
Sbjct: 381 NITVAASENDNPGLLSHVTVGIRVLDVNDNPPEL-AREYDIVVCENSKPGQVIHTISATD 439
Query: 128 ADEGQNA 134
D+ N
Sbjct: 440 KDDFANG 446
>gi|444511338|gb|ELV09857.1| Protocadherin-23, partial [Tupaia chinensis]
Length = 2686
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 80/164 (48%), Gaps = 31/164 (18%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGP------- 75
+ +V A D DSG+ G + Y LL + +F ++P+T GP
Sbjct: 528 IARVTALDTDSGRNGRLSYFLLSDR----EFFKMNPSTGELINWVALDREAGPHHQMTVL 583
Query: 76 IQDEGGLSSTAT--VNIRVTDINDKNPEF-QSLP---YEFSVPEGQD-GLAVGRVHATDA 128
++D G AT V++ VTDIND P F Q LP V EGQ + V V A D
Sbjct: 584 VRDHGSPPRNATMEVHVSVTDINDNRPAFPQCLPEKELHVKVLEGQPVNMLVTTVFAKDP 643
Query: 129 DEGQNAVVYYSV-PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
DEG NA V YS+ PE F +DAN+G+IRT L Y+ + Y
Sbjct: 644 DEGNNAEVIYSISPEGSSDHFKIDANSGEIRTTTTLSYDYRPFY 687
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 74/156 (47%), Gaps = 30/156 (19%)
Query: 35 QVKATDKDSGKFGLVEYRLLD--NNTDAASYFNLDPATEHQGPI---------------- 76
QV A+D D+G +GLVEY L D + +A F +DP H G I
Sbjct: 2 QVTASDADAGLYGLVEYSLYDGFQSHEAPQAFRIDP---HDGRICVTRDIDREGDPSTYD 58
Query: 77 -----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADE 130
+D GGLS+ A V + + D+ND +P F YE S+ + Q G + V ATD D
Sbjct: 59 LLVKAKDGGGLSAQAFVRVELEDVNDNHPVFNPSAYETSLSGQTQPGTEIIGVFATDRDS 118
Query: 131 G-QNAVVYYSVPEDIP--FVVDANTGDIRTNKALDY 163
G AV Y VP D+ F +D TG I +L +
Sbjct: 119 GTHGAVTYELVPGDLSSLFTIDPTTGIIYLTSSLSH 154
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 31/182 (17%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT--------- 70
A R+ G + + A D D G+ G V Y +L N D A F LD ++
Sbjct: 943 AAHVREDVTAGALVHHITAQDPDEGRNGQVTYSILSGNEDRA--FTLDASSGLLTTARAL 1000
Query: 71 ------EHQGPI--QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
+H + +D G SS+ T+ + V D+ND+ P F YE SV E Q+ G
Sbjct: 1001 DYEVQAQHVLTVLARDSGSPARSSSQTLTVTVLDVNDEAPVFLQTLYEASVKENQNPGQF 1060
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLERV 173
V RV A D D G N+ + + + +P F ++++TG++ T LD E Q+ + RV
Sbjct: 1061 VTRVEAMDRDSGINSKLRFEI---LPGSSFGFFEINSDTGEVVTAATLDREAQEAFTLRV 1117
Query: 174 FL 175
+
Sbjct: 1118 LV 1119
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 70/151 (46%), Gaps = 24/151 (15%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EH--------QGPIQD 78
A D+D+G G + YR+LD NT YF +D + EH QG
Sbjct: 1170 AFDRDAGNNGAIRYRILDGNT--GEYFAIDATSGALSTARALDREHVGSFTLVIQGSDLG 1227
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVY 137
E SS V +RV D ND +P F +L Y S+ E G V + A D DEG + V
Sbjct: 1228 EPPRSSAMRVQVRVLDTNDHSPSFPTLHYLASLREDAGAGTEVLALSAVDQDEGLSGQVE 1287
Query: 138 YSVPEDI--PFVVDANTGDIRTNKALDYEKQ 166
Y + E+ F VD TG + T +ALD E +
Sbjct: 1288 YFLTEEALGTFAVDPVTGTLSTCRALDREAR 1318
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 76/160 (47%), Gaps = 34/160 (21%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNN-------TDAASYFNLDPATEHQGPIQ------- 77
T+ V A D D+G +G + Y LL TD +S+ +DP T G IQ
Sbjct: 2109 TVCAVNAVDFDTGPYGELTYSLLSPCFVTHGVLTDPSSFL-IDPLT---GEIQAKRSLDY 2164
Query: 78 -------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGR 122
D+G L+++ TV + V I++ P F Y F +PEGQ + ++GR
Sbjct: 2165 EQDSRYCLTVQAKDKGDLTASLTVWVDVEGIDEFEPIFTQEQYYFDLPEGQKTVRQSIGR 2224
Query: 123 VHATDADEGQNAVVYYSVPEDIPFVVDANT-GDIRTNKAL 161
V A DAD G + VV YS+ PF NT G+I +AL
Sbjct: 2225 VEAVDADAGVDGVVVYSLGAPSPFFAINNTSGNIYLIRAL 2264
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--- 140
ST V + + D+ND +P F S P + G V + A D DEG+N V YS+
Sbjct: 920 STLLVKVVILDVNDHSPAFTSAPAAHVREDVTAGALVHHITAQDPDEGRNGQVTYSILSG 979
Query: 141 PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
ED F +DA++G + T +ALDYE Q ++ V
Sbjct: 980 NEDRAFTLDASSGLLTTARALDYEVQAQHVLTVL 1013
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVP--- 141
+TV I + D+ND P F+ Y SVPEGQ V +V ATD D G N +V YS+
Sbjct: 1548 STVAILIQDVNDNLPRFEQSAYHASVPEGQFYNTRVLQVFATDQDSGLNGLVEYSIVSGN 1607
Query: 142 EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ F +DA +G I N LDYE Y
Sbjct: 1608 REAAFQIDALSGVITANAILDYESVSNY 1635
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 78/155 (50%), Gaps = 25/155 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAA-------------SYFNLDPATEHQGPIQ-- 77
++QV ATD+DSG GLVEY ++ N +AA + + + + + +Q
Sbjct: 1583 VLQVFATDQDSGLNGLVEYSIVSGNREAAFQIDALSGVITANAILDYESVSNYSLIVQAT 1642
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYE-FSVPEGQD-GLAVGRVHATDADEGQN 133
D+G LS+T V I+VTD ND P F LP E + E G+ V RV DAD
Sbjct: 1643 DKGMPRLSATTLVKIQVTDRNDHAPVF--LPSEAVEISESAAIGVVVTRVSVHDADLNP- 1699
Query: 134 AVVYYSVPEDIP---FVVDANTGDIRTNKALDYEK 165
A V+ E P F +D +TG++ K LD+E+
Sbjct: 1700 AFVFSFANEGNPGAHFAIDRSTGEVVLVKTLDFEE 1734
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LSSTA V+IRV D+ND PEF S + V E G V A D D G +A V+Y +
Sbjct: 1967 LSSTAVVSIRVLDVNDSPPEFSSPSHHAHVRESTPPGSPTTVVSARDRDTGPHAEVFYRI 2026
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYE 164
E F+++ TG + +KALDYE
Sbjct: 2027 ISGNEKGHFLLEEKTGVLYVSKALDYE 2053
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 28/179 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-------DAASYFNLDPATE 71
+ A R+ G V A D+D+G V YR++ N + + A +
Sbjct: 1992 HHAHVRESTPPGSPTTVVSARDRDTGPHAEVFYRIISGNEKGHFLLEEKTGVLYVSKALD 2051
Query: 72 HQGPIQ---------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
++ ++ +E LS+ A V I V D ND P+F S +PE Q V
Sbjct: 2052 YEDTVKFRLTVQASDEEKQLSAFAVVAISVLDDNDHAPQFLSSHLTCVIPENQPVSSTVC 2111
Query: 122 RVHATDADEGQNAVVYYS-----------VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V+A D D G + YS + + F++D TG+I+ ++LDYE+ Y
Sbjct: 2112 AVNAVDFDTGPYGELTYSLLSPCFVTHGVLTDPSSFLIDPLTGEIQAKRSLDYEQDSRY 2170
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 20/167 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNL 66
Y A ++ G + +V+A D+DSG + + +L ++ + + L
Sbjct: 1046 LYEASVKENQNPGQFVTRVEAMDRDSGINSKLRFEILPGSSFGFFEINSDTGEVVTAATL 1105
Query: 67 DPATEHQGPIQ---DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
D + ++ +GG LSSTAT+ V D ND P F ++ V E Q+ V
Sbjct: 1106 DREAQEAFTLRVLVRDGGVPSLSSTATILCTVDDENDHVPVFVVPRHDLEVLENQEPELV 1165
Query: 121 GRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
A D D G N + Y + + F +DA +G + T +ALD E
Sbjct: 1166 YTALAFDRDAGNNGAIRYRILDGNTGEYFAIDATSGALSTARALDRE 1212
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 67/158 (42%), Gaps = 26/158 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------EHQGPI---- 76
G ++ V ATD+DSG G V Y L+ D +S F +DP T H P
Sbjct: 105 GTEIIGVFATDRDSGTHGAVTYELVPG--DLSSLFTIDPTTGIIYLTSSLSHLEPTSFVL 162
Query: 77 ----QDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEG--QDGLAVGRVHATDA 128
+D GGL + A V + + + EF+ Y F V E +D L VG V A +
Sbjct: 163 VVSARDGGGLPAVTKADVTVHILQTSLAPAEFERPKYTFLVYEDVPEDSL-VGTVKAREP 221
Query: 129 DEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYE 164
V Y D+ F + G IRT + LD+E
Sbjct: 222 LNSSEPVHYRISSGDLDGMFSIHPWLGTIRTRQPLDHE 259
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 15/122 (12%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSST-ATVNIRVTDIN 96
A D+ +G+ LV+ + + ATEH+ +Q L T + +RV D N
Sbjct: 1716 AIDRSTGEVVLVKT------------LDFEEATEHKLLVQISDSLHLTEGALAVRVLDAN 1763
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDI 155
D PEF Y+ +VPE G +V V A D + N + Y +P F +D +G +
Sbjct: 1764 DNPPEFHQDFYQGTVPESAPVGYSVLTVSAADVESSGN-ISYRILPPSQDFSIDPMSGAV 1822
Query: 156 RT 157
T
Sbjct: 1823 FT 1824
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
+L Y A R+ G ++ + A D+D G G VEY L + +A F +DP T
Sbjct: 1253 TLHYLASLREDAGAGTEVLALSAVDQDEGLSGQVEYFLTE---EALGTFAVDPVTGTLST 1309
Query: 71 ----------EHQ-GPI----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYE-FSVPEG 114
+H G + +G S+T V + VTD+ND +P ++ P++ F P
Sbjct: 1310 CRALDREARSQHTFGAVARDRSAQGPRSTTVLVTVYVTDVNDNDPVWEQNPWDVFLSPGS 1369
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLE 171
+ A+D D G N V +S E F +D +TG++R + E ++L
Sbjct: 1370 PVNQTAVILRASDPDLGPNGTVTFSFAETQSVFSIDEHTGEVRLEQNPSPEYFPIWLR 1427
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV-- 140
S+A VN+ V D+ND P F + E V + G A+ HA D D G N V Y++
Sbjct: 279 SSAEVNVTVLDVNDNAPAFLTASDEIWVSAATRLGAALYLAHAEDRDSGPNGCVRYALAG 338
Query: 141 PEDIPFVVDANTGDIRTNKAL 161
P F V G + N +L
Sbjct: 339 PSAGCFTVHPELGVLSLNCSL 359
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEF-QSLPY----EFSVPEGQDGLAVGRVHATDADEG 131
+D +++A+V +RV D ND P F Q + E SVP G + RV A D D G
Sbjct: 484 EDGPARNASASVIVRVLDDNDNAPAFLQDALFLKVQESSVPRG----VIARVTALDTDSG 539
Query: 132 QNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYE 164
+N + Y + D F ++ +TG++ ALD E
Sbjct: 540 RNGRLSYFLLSDREFFKMNPSTGELINWVALDRE 573
Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 18/112 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD------AASYFNLDPAT- 70
FY + +G +++ V A D +S G + YR+L + D + + F ++P
Sbjct: 1773 FYQGTVPESAPVGYSVLTVSAADVESS--GNISYRILPPSQDFSIDPMSGAVFTVNPTLL 1830
Query: 71 -EHQGPIQ-----DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
+ +Q +GGL + V I + D+ND PEF + Y+ SV E
Sbjct: 1831 LDKISTVQFLVEACDGGLPELRAVMLVEIEIQDVNDHAPEFTATSYDLSVSE 1882
>gi|410925612|ref|XP_003976274.1| PREDICTED: cadherin-24-like, partial [Takifugu rubripes]
Length = 1101
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 85/179 (47%), Gaps = 29/179 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV ATD D +G +L+ YF++DP T
Sbjct: 88 YSASVPEMANIGTSIIQVTATDADDPTYG-NSAKLVYTLVQGQQYFSVDPQTGILRTAVP 146
Query: 71 EHQGPIQDE--------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
+ QD+ GGLS T TV +++TD+ND P F + FSV E
Sbjct: 147 DMDRETQDQYLVLLQAKDMGGHLGGLSGTTTVTVKLTDVNDNPPRFTQSMWSFSVSELAI 206
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRT-NKALDYEKQQLY 169
G +GR+ ATDAD G+NA + Y++ E D + N I T N+A+DYE + Y
Sbjct: 207 PGAEIGRISATDADLGENAKLEYTILEGESGDTFNISGMNQEAIITLNRAVDYESRSSY 265
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 68/141 (48%), Gaps = 24/141 (17%)
Query: 50 EYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF 109
EYRL+ TD + L+P+++ IRV DIND P F PY
Sbjct: 47 EYRLIATATDRLTDRALEPSSQ----------------FIIRVQDINDNPPVFDEGPYSA 90
Query: 110 SVPEGQD-GLAVGRVHATDADE---GQNA-VVYYSVPEDIPFVVDANTGDIRTNKA-LDY 163
SVPE + G ++ +V ATDAD+ G +A +VY V F VD TG +RT +D
Sbjct: 91 SVPEMANIGTSIIQVTATDADDPTYGNSAKLVYTLVQGQQYFSVDPQTGILRTAVPDMDR 150
Query: 164 EKQQLYLERVFLISKFATSYL 184
E Q YL V L +K +L
Sbjct: 151 ETQDQYL--VLLQAKDMGGHL 169
>gi|5832711|dbj|BAA84070.1| Flamingo 1 [Mus musculus]
Length = 2920
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 85/181 (46%), Gaps = 26/181 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS-YFNLDPAT---EHQG 74
Y R+ E+G ++ V+ATD D+ + YRLL+ D+ S F +DP + +G
Sbjct: 294 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGAGDSPSDAFEIDPRSGVIRTRG 353
Query: 75 PI------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D G SSTA V + V D ND P+F Y V E
Sbjct: 354 PVDREEVESYKLTVEASDQGRDPGPRSSTAIVFLSVEDDNDNAPQFSEKRYVVQVREDVT 413
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLER 172
G V RV A+D D+G NA+V+YS+ F +DA TG + LDYE + Y R
Sbjct: 414 PGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLR 473
Query: 173 V 173
+
Sbjct: 474 I 474
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-------------DAASYFN 65
Y R+ G +++V A+D+D G LV Y ++ N D S +
Sbjct: 404 YVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 463
Query: 66 LDPATEHQGPIQDEGG----LSS-TATVNIRVTDIND-KNPEFQSLPYEFSVPEGQD-GL 118
+ E+ I+ + G LS+ + V ++V DIND + P F S P++ +V E G
Sbjct: 464 YETTKEYTLRIRAQDGGRPPLSNVSGLVTVQVLDINDIRPPIFVSTPFQATVLESVPLGY 523
Query: 119 AVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V A DAD G NA + YS V D PF ++ TG I LD E+ Y
Sbjct: 524 LVLHVQAIDADAGDNARLEYSLAGVGHDFPFTINNGTGWISVAAELDREEVDFY 577
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 83/180 (46%), Gaps = 31/180 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPATE---- 71
Y A + G ++ ++A D D G+ G +EY L D+ ++ +F+LDP T
Sbjct: 186 YQATVPENQPAGTSVASLRAIDPDEGEAGRLEYTMDALFDSRSN--HFFSLDPITGVVTT 243
Query: 72 -------------HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ QD G S+ AT+ I VTD ND +P F+ Y+ S+ E +
Sbjct: 244 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 303
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPE---DIP---FVVDANTGDIRTNKALDYEKQQLY 169
G V V ATD D NA + Y + E D P F +D +G IRT +D E+ + Y
Sbjct: 304 VGYEVLTVRATDGDAPPNANILYRLLEGAGDSPSDAFEIDPRSGVIRTRGPVDREEVESY 363
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY 137
+G TA + + VTD N P FQS Y + E + G V + ATD D G+NA +
Sbjct: 690 DGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNGNEDRPAGTTVVLISATDEDTGENARIT 749
Query: 138 YSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
Y + + IP F +D +TG + T LDYE Q Y
Sbjct: 750 YFMEDSIPQFRIDGDTGAVTTQAELDYEDQVSY 782
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 74/161 (45%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLDPATEHQGPIQD- 78
+++Q+ ATD+DSG G V Y + + LD Q ++
Sbjct: 834 SVLQILATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAY 893
Query: 79 --EGGLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
+ G+ T V + V D ND P F+ ++ V E GLAV RV ATD DEG
Sbjct: 894 AVDKGMPPARTPMEVTVTVLDGNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGT 953
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 954 NAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYEDRPEYV 994
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSSTA 86
G T++ + ATD+D+G+ + Y + D+ F +D A Q + E +S T
Sbjct: 729 GTTVVLISATDEDTGENARITYFM----EDSIPQFRIDGDTGAVTTQAELDYEDQVSYTL 784
Query: 87 TVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
+ R V D+ND P+F Y+ +V E +V ++ ATD D
Sbjct: 785 AITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGTVYEDVPPFTSVLQILATDRD 844
Query: 130 EGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N V+Y+ D F+V++ +G +RT + LD E Y+ R + + K
Sbjct: 845 SGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYAVDK 897
Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 32/163 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G+ + +V ATD D G + Y++++ N F LD + + D
Sbjct: 937 IGLAVARVTATDPDEGTNAQIMYQIVEGNI--PEVFQLDIFSGELTALVDLDYEDRPEYV 994
Query: 79 ------EGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRV 123
L S ATV++R+ D ND P + F S P G A+GRV
Sbjct: 995 LVIQATSAPLVSRATVHVRLLDRNDNPPVLGNFEILFNNYVTNRSSSFPGG----AIGRV 1050
Query: 124 HATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
A D D + + ++ V ++A+TG++R ++ALD +
Sbjct: 1051 PAHDPDISDSLTYSFERGNELSLVLLNASTGELRLSRALDNNR 1093
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 100 PEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV------PEDIPFVVDANT 152
P+FQ Y+ +VPE Q G +V + A D DEG+ + Y++ + F +D T
Sbjct: 179 PQFQPPSYQATVPENQPAGTSVASLRAIDPDEGEAGRLEYTMDALFDSRSNHFFSLDPIT 238
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G + T + LD E + ++ RV
Sbjct: 239 GVVTTAEELDRETKSTHVFRV 259
>gi|22095553|sp|Q9R0M0.2|CELR2_MOUSE RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 2;
AltName: Full=Flamingo homolog; Flags: Precursor
Length = 2920
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 85/181 (46%), Gaps = 26/181 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS-YFNLDPAT---EHQG 74
Y R+ E+G ++ V+ATD D+ + YRLL+ D+ S F +DP + +G
Sbjct: 294 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGAGDSPSDAFEIDPRSGVIRTRG 353
Query: 75 PI------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D G SSTA V + V D ND P+F Y V E
Sbjct: 354 PVDREEVESYKLTVEASDQGRDPGPRSSTAIVFLSVEDDNDNAPQFSEKRYVVQVREDVT 413
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLER 172
G V RV A+D D+G NA+V+YS+ F +DA TG + LDYE + Y R
Sbjct: 414 PGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLR 473
Query: 173 V 173
+
Sbjct: 474 I 474
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-------------DAASYFN 65
Y R+ G +++V A+D+D G LV Y ++ N D S +
Sbjct: 404 YVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 463
Query: 66 LDPATEHQGPIQDEGG----LSS-TATVNIRVTDIND-KNPEFQSLPYEFSVPEGQD-GL 118
+ E+ I+ + G LS+ + V ++V DIND + P F S P++ +V E G
Sbjct: 464 YETTKEYTLRIRAQDGGRPPLSNVSGLVTVQVLDINDIRPPIFVSTPFQATVLESVPLGY 523
Query: 119 AVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V A DAD G NA + YS V D PF ++ TG I LD E+ Y
Sbjct: 524 LVLHVQAIDADAGDNARLEYSLAGVGHDFPFTINNGTGWISVAAELDREEVDFY 577
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 83/180 (46%), Gaps = 31/180 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPATE---- 71
Y A + G ++ ++A D D G+ G +EY L D+ ++ +F+LDP T
Sbjct: 186 YQATVPENQPAGTSVASLRAIDPDEGEAGRLEYTMDALFDSRSN--HFFSLDPITGVVTT 243
Query: 72 -------------HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ QD G S+ AT+ I VTD ND +P F+ Y+ S+ E +
Sbjct: 244 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 303
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPE---DIP---FVVDANTGDIRTNKALDYEKQQLY 169
G V V ATD D NA + Y + E D P F +D +G IRT +D E+ + Y
Sbjct: 304 VGYEVLTVRATDGDAPPNANILYRLLEGAGDSPSDAFEIDPRSGVIRTRGPVDREEVESY 363
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY 137
+G TA + + VTD N P FQS Y + E + G V + ATD D G+NA +
Sbjct: 690 DGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNGNEDRPAGTTVVLISATDEDTGENARIT 749
Query: 138 YSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
Y + + IP F +D +TG + T LDYE Q Y
Sbjct: 750 YFMEDSIPQFRIDGDTGAVTTQAELDYEDQVSY 782
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 74/161 (45%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLDPATEHQGPIQD- 78
+++Q+ ATD+DSG G V Y + + LD Q ++
Sbjct: 834 SVLQILATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAY 893
Query: 79 --EGGLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
+ G+ T V + V D ND P F+ ++ V E GLAV RV ATD DEG
Sbjct: 894 AVDKGMPPARTPMEVTVTVLDGNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGT 953
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 954 NAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYEDRPEYV 994
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSSTA 86
G T++ + ATD+D+G+ + Y + D+ F +D A Q + E +S T
Sbjct: 729 GTTVVLISATDEDTGENARITYFM----EDSIPQFRIDGDTGAVTTQAELDYEDQVSYTL 784
Query: 87 TVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
+ R V D+ND P+F Y+ +V E +V ++ ATD D
Sbjct: 785 AITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGTVYEDVPPFTSVLQILATDRD 844
Query: 130 EGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N V+Y+ D F+V++ +G +RT + LD E Y+ R + + K
Sbjct: 845 SGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYAVDK 897
Score = 42.7 bits (99), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 32/163 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G+ + +V ATD D G + Y++++ N F LD + + D
Sbjct: 937 IGLAVARVTATDPDEGTNAQIMYQIVEGNI--PEVFQLDIFSGELTALVDLDYEDRPEYV 994
Query: 79 ------EGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRV 123
L S ATV++R+ D ND P + F S P G A+GRV
Sbjct: 995 LVIQATSAPLVSRATVHVRLLDRNDNPPVLGNFEILFNNYVTNRSSSFPGG----AIGRV 1050
Query: 124 HATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
A D D + + ++ V ++A+TG++R ++ALD +
Sbjct: 1051 PAHDPDISDSLTYSFERGNELSLVLLNASTGELRLSRALDNNR 1093
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 100 PEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV------PEDIPFVVDANT 152
P+FQ Y+ +VPE Q G +V + A D DEG+ + Y++ + F +D T
Sbjct: 179 PQFQPPSYQATVPENQPAGTSVASLRAIDPDEGEAGRLEYTMDALFDSRSNHFFSLDPIT 238
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G + T + LD E + ++ RV
Sbjct: 239 GVVTTAEELDRETKSTHVFRV 259
>gi|345328979|ref|XP_001512413.2| PREDICTED: protocadherin Fat 4-like [Ornithorhynchus anatinus]
Length = 3217
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 85/174 (48%), Gaps = 24/174 (13%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL------LDNNTDAASYFN---LDP 68
Y A + + + ++K TDKD F + L +D N S N LD
Sbjct: 1584 IYNIFALENSQSNSVIFRLKVTDKDEAGFSQGHFVLNSTVFDVDKN-GVLSLMNGVELDR 1642
Query: 69 ATEHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG----L 118
T +Q + GLSS+A +NI V D+ND NPEFQ P+ F++PEG+ G
Sbjct: 1643 ETVPGFILQVWAVDAEIDGLSSSAWLNITVLDVNDNNPEFQEQPFSFTIPEGRYGADVST 1702
Query: 119 AVGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
VG+V ATD D+G NA++ + S E+ F + +G+I +LD E Q Y
Sbjct: 1703 VVGKVAATDLDDGDNALISFHLCSETEENVFSI-KQSGNILVVNSLDREVQDTY 1755
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 76/162 (46%), Gaps = 28/162 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLD--------NNTDAASY-------------FNLDPATE 71
++ +KA D DSG GL+ Y +L N T Y + + + E
Sbjct: 2425 IIHLKAQDNDSGSNGLLTYGILSGDRQKFKINATTGMLYSIVSFDYEEGHNEYQIVVSAE 2484
Query: 72 HQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADE 130
G + + G TV + + D ND PEF+S+ F+V E +G AVGRV A D D
Sbjct: 2485 DDGIPEKKMGY---CTVILNILDKNDHAPEFESVD-TFTVKENSPNGTAVGRVIALDRDS 2540
Query: 131 GQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLYL 170
G NA + Y++ + + F +D G+I+ DYEKQ Y+
Sbjct: 2541 GDNAFILYAILDGGENMFYIDVILGNIKVKNPPDYEKQNQYI 2582
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 83 SSTATVNIRVTDINDKNPEFQSL-PYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
++ + + + DIND P F SL P S PEGQ+ G ATD D G NA + Y +
Sbjct: 1976 TAVTMITVTIRDINDNPPVFSSLIPTTLSCPEGQNSTDFGIFSATDRDIGDNARITYFLE 2035
Query: 142 EDI--PFVVDANTGDIRTNKALDYEKQQLYLERVF 174
+D F ++ +TG + T K LD E + Y ++
Sbjct: 2036 DDFGGTFQINNSTGRLITGKTLDRETKDNYTLKIL 2070
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 78 DEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAV 135
D G + +AT+N+ +T D+ND P F + +V E + + V ATD D G NA
Sbjct: 2073 DMGKMQLSATLNLSLTVEDVNDNPPTFPQESFRITVKENEPPQTILNVTATDKDIGYNAA 2132
Query: 136 VYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
++YS+ E F + +G I T + LDYE Y
Sbjct: 2133 IHYSIVETTSLFFIGELSGKIGTLQPLDYETSAQY 2167
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 73/174 (41%), Gaps = 36/174 (20%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRL-------------------LDNNTDAASYFN 65
+ + +TL+ A D DSG GLV Y L D + + + +N
Sbjct: 1380 ESQRVEITLLNASAIDADSGYNGLVSYSLKGGESKIDIDSVTGFITLRKDLDREMQALYN 1439
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRV-- 123
L QG + L++ + + V D+ND P F+ Y +V E A+G V
Sbjct: 1440 LTITASDQG----QPPLTTELNITVIVEDVNDNKPIFEMSKYNVTVHENA---AIGTVLL 1492
Query: 124 --HATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
ATD D G NA V Y++ P F ++ TG + ++ LD+E + +
Sbjct: 1493 ATTATDLDVGANAEVKYAIASVDPSSASPMFSINTTTGQLSLSQPLDFETIKWF 1546
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 25/158 (15%)
Query: 32 TLMQVKATDKD-SGKFGLVEYRLLDNNTDAAS------------YFNLDPATEHQGPIQD 78
T+++V+ATDKD S + L++Y LL N + S + + + ++ ++
Sbjct: 868 TVIRVEATDKDYSLDYHLIQYSLLGQNAEYFSIKEGDGVITLKKFLDFNKIQQYNLTVKA 927
Query: 79 E---GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG---LAVGRVHATDADEGQ 132
+ G S TAT+ I V D + NP F Y+ ++ E Q G L+ + A D D G
Sbjct: 928 QERFGNNSGTATLLIAVQDYDTMNPYFIHSIYKANILENQMGKLTLSPEEIKAIDGDIGI 987
Query: 133 NAVVYYSVPEDIPFV------VDANTGDIRTNKALDYE 164
N VYY V P V ++AN+G + ALD E
Sbjct: 988 NEKVYYEVKRVDPAVYSSNLSINANSGALFLKNALDRE 1025
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
QD ++ A V + + D ND PEF+ Y S+PE DG V + TD DEG
Sbjct: 1039 QDNELKTANAMVLVSIQDENDNLPEFERSSYMVSIPENSPDGTTVFHIKVTDKDEGGFNG 1098
Query: 136 VYYSVPEDIPFVV-DANTGDIRTNKALDYEKQQLYLERV 173
+ +PED F + DA ++ + LD E+ Y +V
Sbjct: 1099 TLHILPEDSAFQINDAGMISVKNSSVLDRERIGKYTLQV 1137
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP-ED 143
+TV + VTDIND P F L V E Q + + A DAD G N +V YS+ +
Sbjct: 1353 STVLVNVTDINDNPPSFNMLNRTIHVLESQRVEITLLNASAIDADSGYNGLVSYSLKGGE 1412
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLY 169
+D+ TG I K LD E Q LY
Sbjct: 1413 SKIDIDSVTGFITLRKDLDREMQALY 1438
Score = 42.7 bits (99), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 10/136 (7%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP----IQDEGGLSST 85
G + +V A D+DSG + Y +LD + + + + P Q++ L++
Sbjct: 2527 GTAVGRVIALDRDSGDNAFILYAILDGGENMFYIDVILGNIKVKNPPDYEKQNQYILTTN 2586
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI 144
TV I + D+ND P F Y +V +V V A D D+G NA V YS+ D+
Sbjct: 2587 KTVTINIVDLNDNPPRFTQDDYSATVNMVNPVASSVITVKAIDGDQGDNAAVEYSILPDV 2646
Query: 145 P----FVVD-ANTGDI 155
F++D N G I
Sbjct: 2647 TISQNFLIDNPNEGRI 2662
Score = 42.4 bits (98), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 68/164 (41%), Gaps = 29/164 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL----DNNTDAASYFNLDPATEHQG 74
YGA ++ + +V ATD D G L+ + L +N N+
Sbjct: 1696 YGA------DVSTVVGKVAATDLDDGDNALISFHLCSETEENVFSIKQSGNILVVNSLDR 1749
Query: 75 PIQDEGGLSSTAT------------VNIRVTDINDKNPEFQSLPY--EFSVPEGQDGLAV 120
+QD L A+ V I + D+ND P+F Y + V Q+G V
Sbjct: 1750 EVQDTYKLLLVASDRGTPQRQNYTYVTIGILDVNDNPPQFTKSEYSAKIRVTTAQEGDFV 1809
Query: 121 GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL 161
V ATD D G N+++ YS ED FV+D TG I ++ L
Sbjct: 1810 LSVLATDLDLGNNSLISYSFSTPSED--FVIDEQTGRITLSRNL 1851
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 56/134 (41%), Gaps = 21/134 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS-YFNLDPATEHQGPIQ 77
Y + +G L+ ATD D G V+Y + + +AS F+++ T Q
Sbjct: 1477 YNVTVHENAAIGTVLLATTATDLDVGANAEVKYAIASVDPSSASPMFSINTTTGQLSLSQ 1536
Query: 78 ----------------DEGG---LSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDG 117
+GG L S +V I+V D+ND PEF QS+ F++ Q
Sbjct: 1537 PLDFETIKWFKIEVKASDGGNPSLHSLTSVFIQVLDVNDNPPEFSQSIYNIFALENSQSN 1596
Query: 118 LAVGRVHATDADEG 131
+ R+ TD DE
Sbjct: 1597 SVIFRLKVTDKDEA 1610
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 28/129 (21%)
Query: 30 GVTLMQVKATDKDSGKF------------------GLVEYR---LLDNNTDAASYFNLDP 68
G T+ +K TDKD G F G++ + +LD Y
Sbjct: 1080 GTTVFHIKVTDKDEGGFNGTLHILPEDSAFQINDAGMISVKNSSVLDRER-IGKYTLQVK 1138
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
AT+H P + + A + I + D ND +P F+ PYE ++ + G+ + ++ + D
Sbjct: 1139 ATDHLPPHSE-----AQAVITISLLDENDNSPVFKGTPYEQTIFSNRTVGMTIVQIVSHD 1193
Query: 128 ADEGQNAVV 136
D+G+N ++
Sbjct: 1194 EDDGKNGII 1202
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 72/175 (41%), Gaps = 24/175 (13%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQDEGGLSST 85
+G+T++Q+ + D+D GK G++ L N YF L+ + + I E
Sbjct: 1182 VGMTIVQIVSHDEDDGKNGIISLTLTGGN--EKGYFELNVTSGIITLKKDIILEANRFEQ 1239
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNA------VVYYS 139
T+ I TD D P S+P V V R + +E +++ V + S
Sbjct: 1240 FTLWITATDAGDV-PRSSSVPVHILVTGESKPYFVHRSYNGFVEEEKSSPVIVVQVEFVS 1298
Query: 140 VPEDIP-----------FVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSY 183
+ IP F +D+N G I T LDYE QQ Y+ V L + Y
Sbjct: 1299 LNPIIPVSLQVLTESDTFAIDSN-GTIWTKTRLDYELQQSYILNVSLTQRDVIDY 1352
>gi|224045066|ref|XP_002199216.1| PREDICTED: cadherin-6 [Taeniopygia guttata]
Length = 791
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 86/188 (45%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 165 YNASIPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKT 220
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 221 ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFRAPE 280
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEK 165
+GR+ A DAD +NA + YS+ E I D G I KALD+E
Sbjct: 281 SVPLDSPIGRIKANDADVDENAEIEYSITEGDGYDMFGITTDKDTQEGIITVKKALDFES 340
Query: 166 QQLYLERV 173
+ LY+ +V
Sbjct: 341 KNLYILKV 348
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y S+PE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKIHDINDNEPMFTKDVYNASIPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 207
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 208 YFSVESETGIIKTALLNMDRENREQY 233
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ D D+G ++ Y + D+ F+++ NTGDI+ K LD E++ +Y+
Sbjct: 69 GTDYQYVGKLHS-DQDKGDGSLKYILSGDGAGDL-FIINENTGDIQATKRLDREEKPVYI 126
Query: 171 ERVFLISK 178
R I++
Sbjct: 127 LRAQAINR 134
>gi|327276783|ref|XP_003223147.1| PREDICTED: cadherin-10-like [Anolis carolinensis]
Length = 789
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 86/185 (46%), Gaps = 31/185 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 165 YTASVPEMSVVGTSVVQVTATDADDPSYG-NSARIIYSILQGQPYFSVEPETGIIRTALP 223
Query: 71 --------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
++Q IQ + GGLS T TVNI +TD+ND P F F + E
Sbjct: 224 NMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSSVHFRIQESSP 283
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQL 168
G +G V A+DAD G+NA + Y + + DI D G I K LDYE ++L
Sbjct: 284 VGTPIGSVKASDADVGRNAELEYRIVDGDGRDMFDIVTQKDTQEGIITVRKPLDYENRRL 343
Query: 169 YLERV 173
Y +V
Sbjct: 344 YTLKV 348
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A + YS+ + P
Sbjct: 148 IKIHDINDNEPMFLEEVYTASVPEMSVVGTSVVQVTATDADDPSYGNSARIIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|301612247|ref|XP_002935630.1| PREDICTED: cadherin-10-like [Xenopus (Silurana) tropicalis]
Length = 815
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 87/188 (46%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G ++QV A D D +G V Y +L YF+++P T
Sbjct: 192 YTASVPEMSDVGTYVVQVTAADADDPSYGNSAKVIYSILQ----GQPYFSVEPETGIIRT 247
Query: 71 ----------EH-QGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
EH Q IQ + GGLS T TVNI ++D+ND P F Y SVPE
Sbjct: 248 ALPNMNRENREHYQVVIQAKDMGGQMGGLSGTTTVNITLSDVNDNPPRFSQNSYHISVPE 307
Query: 114 -GQDGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVV----DANTGDIRTNKALDYEK 165
G VGR+ ATDAD G+NA V Y + E F + G I K LDYE
Sbjct: 308 TATVGSTVGRIKATDADIGKNAEVEYRILDGDETAVFNIFTEKSTQDGVITLLKRLDYES 367
Query: 166 QQLYLERV 173
++LY +V
Sbjct: 368 KRLYTLKV 375
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE D G V +V A DAD+ G +A V YS+ + P
Sbjct: 175 IKIHDINDNEPTFLEEVYTASVPEMSDVGTYVVQVTAADADDPSYGNSAKVIYSILQGQP 234
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 235 YFSVEPETGIIRT 247
>gi|194853658|ref|XP_001968202.1| GG24633 [Drosophila erecta]
gi|190660069|gb|EDV57261.1| GG24633 [Drosophila erecta]
Length = 3556
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 31/182 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD----------NNTDAASYFNLDP 68
Y + + ++QV A+D D+G + YR++D +++D + +F + P
Sbjct: 1041 YSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFP 1100
Query: 69 ATEH---QGPI----QDEGGLSSTATVN------------IRVTDINDKNPEFQSLPYEF 109
+ + P+ +D L+ AT N +RV D ND +P+FQ YEF
Sbjct: 1101 NSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEF 1160
Query: 110 SVPEG-QDGLAVGRVHATDADEGQNAVVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQ 167
+ E + G VG V A+D D G+NA + YS +P + F V TG+I T + LD E ++
Sbjct: 1161 RIEENLRRGSVVGVVTASDLDLGENAAIRYSLLPINSSFQVHPVTGEISTREPLDRELRE 1220
Query: 168 LY 169
LY
Sbjct: 1221 LY 1222
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 24/176 (13%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + + G +++QV A D+D G + Y L + A +F +DP T
Sbjct: 508 LYHANVMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRS 567
Query: 71 ---------EHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
I +GG LSSTAT+ + + D+ND P F Y SV E + G
Sbjct: 568 HIDCETEPVPQLTVIARDGGVPPLSSTATILVTIHDVNDNEPIFDQSFYNVSVAENEPVG 627
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
+ +V A+D D G NA+V Y++ E F V + +G+I LD+E++ Y
Sbjct: 628 RCILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSY 683
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV----- 140
TVNI + D+ND P F Y +VPE G +V +V+A+D D +N +V Y++
Sbjct: 271 TVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQS 330
Query: 141 PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ F +D TG I NKALD+E ++L+
Sbjct: 331 DKEQMFRIDPRTGAIYINKALDFETKELH 359
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 78/168 (46%), Gaps = 33/168 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI---------- 76
G + V A+D D G+ + Y LL N S F + P T + P+
Sbjct: 1169 GSVVGVVTASDLDLGENAAIRYSLLPIN----SSFQVHPVTGEISTREPLDRELRELYDL 1224
Query: 77 ----QDEGGLSSTATVNIR--VTDINDKNPEFQSLPYE--FSVPEGQD-GLAVGRVHATD 127
+D+G +A V +R V+D+ND PE P E SV E Q G V RV A D
Sbjct: 1225 VVEARDQGTPVRSARVPVRIHVSDVNDNAPEIAD-PQEDVVSVREEQPPGTEVVRVRAVD 1283
Query: 128 ADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
D GQNA + YS+ + F +D ++G IRT LD+E++ +Y
Sbjct: 1284 RDNGQNASITYSIVKGRDSDGHGLFSIDPSSGVIRTRVVLDHEERSIY 1331
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
VNI V D+ND PEF++ SVPE + G + HA D D G + V YS+ D
Sbjct: 917 VNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVSYSLVSDSGK 976
Query: 146 --FVVDANTGDIRTNKALDYEKQQLY 169
F +DA +G + + LDYE Q +
Sbjct: 977 RLFAIDARSGHLSLTQHLDYESSQRH 1002
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 72/164 (43%), Gaps = 28/164 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------------HQGPIQ--- 77
++ V ATD DSG FG V YR++ N A F +D +T P+
Sbjct: 739 IVAVVATDPDSGNFGQVSYRIVAGN--EAGIFRIDRSTGEIFVVRPDMLSVRTQPMHMLN 796
Query: 78 ----DEGGLSSTA--TVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADE 130
D G L S A V + + D + P F+ Y + V E G VG V A D
Sbjct: 797 ISATDGGNLRSNADAVVFLSIIDAMQRPPIFEKARYNYYVKEDIPRGTVVGSVIAASGDI 856
Query: 131 GQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYE-KQQLYL 170
+ V YS+ P F ++ N+G+IR K LD+E K Q+ L
Sbjct: 857 AHRSPVKYSIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLL 900
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 25/166 (15%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY--------------RLLDNNTDA 60
D FY + +G +++V A+D D G +V Y R
Sbjct: 612 DQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEICI 671
Query: 61 ASYFNLDPATEHQGPI--QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV------P 112
A + + + ++ P+ D GGLS+TA + +++TD+ND P F Y+ S+ P
Sbjct: 672 AGELDFERRSSYEFPVLATDRGGLSTTAMIKMQLTDVNDNRPVFYPREYKVSLRESPKAP 731
Query: 113 EGQDGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
+ V ATD D G V Y + E F +D +TG+I
Sbjct: 732 TQASSTPIVAVVATDPDSGNFGQVSYRIVAGNEAGIFRIDRSTGEI 777
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L++ A + I + D ND +P+F + +V EG + G V +VHA D+D G NA + Y +
Sbjct: 2302 LATYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHI 2361
Query: 141 PE---DIPFVVD-ANTGDIRTNKALDYEKQQLYLERVF 174
+ D FV++ A +G +RTN LD E + +Y ++
Sbjct: 2362 VDGNHDNAFVIEPAFSGIVRTNIVLDREIRDIYKLKII 2399
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 51/195 (26%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
S + G++ D LG +++Q+ A D D G V RL+ ++L T+ Q
Sbjct: 1955 SKYTGSVQEDA-PLGTSVLQINAVDADLG----VNARLV---------YSLANETQWQFA 2000
Query: 76 IQDEGGL------------------------------SSTATVNIRVTDINDKNPEFQSL 105
I + GL S+T V I V DIND P F+
Sbjct: 2001 IDSQSGLITTVGKLDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPVFERY 2060
Query: 106 PYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPED-----IPFVVDANTGDIRTNK 159
PY VP Q G + +V A DAD G NA + YS+ + F ++ +TG + ++
Sbjct: 2061 PYIGQVPALIQPGQTLLKVQALDADLGANAEIVYSLKAENSAVSAKFRINPSTGALSASQ 2120
Query: 160 ALDYEKQQ-LYLERV 173
+L E + L+LE +
Sbjct: 2121 SLASESGKLLHLEVI 2135
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 64/147 (43%), Gaps = 26/147 (17%)
Query: 18 FYGAMAR----DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQ 73
F +M R + ELG L A DKDSG G V Y L+ ++ F +D + H
Sbjct: 931 FEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVSYSLVSDS--GKRLFAIDARSGHL 988
Query: 74 GPIQD----------------EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
Q +GG LS+ T+ + V D+ND P F+ Y +V E
Sbjct: 989 SLTQHLDYESSQRHSLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKEEYSVNVSES 1048
Query: 115 QD-GLAVGRVHATDADEGQNAVVYYSV 140
+ + +V+A+D D G NA + Y +
Sbjct: 1049 RSINAQIIQVNASDLDTGNNARITYRI 1075
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L ++ ++ +R+TD+ND PEF+ Y +V E D G +V +V A D DEG N+ + YS+
Sbjct: 484 LHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAHDRDEGLNSALTYSL 543
Query: 141 PEDIP-----FVVDANTGDIRTNKALDYEKQ 166
E F +D TG I T +D E +
Sbjct: 544 AETPETHAQWFQIDPQTGLITTRSHIDCETE 574
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 86 ATVNIRVTDINDKNPEFQ-SLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
AT+ I V D+ND +PEF+ Y SVPE + + V A+D DEG NA + YS+
Sbjct: 1831 ATIYITVGDVNDNSPEFRPGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITGGN 1890
Query: 143 -DIPFVVDANTGDIRTNKALDYEKQQLY 169
F +D+++G++ + + LD E+ Y
Sbjct: 1891 LGNKFSIDSSSGEL-SARPLDREQHSRY 1917
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 61/148 (41%), Gaps = 27/148 (18%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLD----PATEHQGPIQDEGGLSSTATVNIRVTDI 95
D+ SG LV RLLD + S F L+ T P SS TV I V D+
Sbjct: 1429 DRHSGN--LVVARLLDR--EVQSEFRLEIRALDTTATNNP------QSSAITVKIEVADV 1478
Query: 96 NDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP--------- 145
ND PE+ P + V E G + ATDAD G N + Y + P
Sbjct: 1479 NDNAPEWPQDPIDLQVSEATPIGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQA 1538
Query: 146 ---FVVDANTGDIRTNKALDYEKQQLYL 170
F +D+ TG + LD+E Q YL
Sbjct: 1539 MTLFSMDSLTGSLSLQAPLDFETVQEYL 1566
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 19/101 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------- 71
Y A + +G +++QV A+D D+ + GLVEY + +D F +DP T
Sbjct: 291 YFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAIYINKA 350
Query: 72 --------HQGPI----QDEGGLSSTATVNIRVTDINDKNP 100
H+ + E L +TA V+IRVTD+ND P
Sbjct: 351 LDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQP 391
Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 25/157 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--FNLDPAT---------------- 70
+G ++ + A+D D G FG + Y + +D +S+ F +D T
Sbjct: 2877 VGSSVFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSETGLVTSAFVFDYEQRQR 2936
Query: 71 -EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG---QDGLAVGRVHAT 126
+ + D GG + V + + ++ P+F Y F +P G VG+V AT
Sbjct: 2937 YDMELLASDMGGKKAGVAVRVEIESRDEFTPQFTERTYRFVLPAAVALPQGYVVGQVTAT 2996
Query: 127 DADEGQNAVVYY--SVPEDIPFVVDANTGDIRTNKAL 161
D+D G + V Y S P F V+ ++G + + L
Sbjct: 2997 DSDSGPDGRVVYQLSAPHS-HFKVNRSSGAVLIKRKL 3032
Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI-- 144
+ I V D ND P F+ Y SV E G +V +++A DAD G NA + YS+ +
Sbjct: 1938 ITIFVEDQNDNAPSFKLSKYTGSVQEDAPLGTSVLQINAVDADLGVNARLVYSLANETQW 1997
Query: 145 PFVVDANTGDIRTNKALDYEKQQLY 169
F +D+ +G I T LD E Q Y
Sbjct: 1998 QFAIDSQSGLITTVGKLDRELQASY 2022
Score = 42.7 bits (99), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 38/182 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
+ A + + G + QV A D D+G + Y ++D N D A F ++PA G ++
Sbjct: 2327 FVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHDNA--FVIEPA--FSGIVRT 2382
Query: 78 -------------------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEF-SVPEGQ 115
DEG ++ TAT+ +++ D+ND P F P +V E
Sbjct: 2383 NIVLDREIRDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTFP--PNNLVTVSEAT 2440
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE---DIP----FVVDANTGDIRTNKALDYEKQQ 167
+ G + + A D D A+ Y E DI F +D +G + + LDYE QQ
Sbjct: 2441 ELGAVITSISANDVDT-YPALTYRLGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQQ 2499
Query: 168 LY 169
Y
Sbjct: 2500 EY 2501
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 16/126 (12%)
Query: 54 LDNNTDAASYFNLDPA--TEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
LD ++ A SY + A + HQ P L S + + D ND +P+F Y +
Sbjct: 2818 LDYDSGAKSYELIIRACDSHHQRP------LCSLQPFRLELHDENDNDPKFPLSEYVHFL 2871
Query: 112 PEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIP----FVVDANTGDIRTNKALDY 163
E + G +V R HA+D D+G + YS+ P D F VD+ TG + + DY
Sbjct: 2872 AENEPVGSSVFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSETGLVTSAFVFDY 2931
Query: 164 EKQQLY 169
E++Q Y
Sbjct: 2932 EQRQRY 2937
Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 86/196 (43%), Gaps = 37/196 (18%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT---------EHQ 73
R++ G +++V+A D+D+G+ + Y ++ ++D F++DP++ +H+
Sbjct: 1267 REEQPPGTEVVRVRAVDRDNGQNASITYSIVKGRDSDGHGLFSIDPSSGVIRTRVVLDHE 1326
Query: 74 -------GPIQDEGGLSSTATVN---IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGR 122
G +GG T+ + V D+ND P F S F V E G VG
Sbjct: 1327 ERSIYRLGVAASDGGSPPRETIRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGS 1386
Query: 123 VHATD--ADEGQNAV--------VYYSVPE------DIPFVVDANTGDIRTNKALDYEKQ 166
+ + AD +N+V V Y++ + F +D ++G++ + LD E Q
Sbjct: 1387 ISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQ 1446
Query: 167 QLYLERVFLISKFATS 182
+ + + AT+
Sbjct: 1447 SEFRLEIRALDTTATN 1462
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 68/172 (39%), Gaps = 39/172 (22%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLL-------DNNTDAASYFNLDPAT---EHQGPIQD 78
+G + ATD D+G G ++YRL+ ++ A + F++D T Q P+
Sbjct: 1500 IGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMTLFSMDSLTGSLSLQAPLDF 1559
Query: 79 EG-------------------GLSSTATVNIRVTDINDKNPEFQS-------LPYEFSVP 112
E L ++ TV +RV D ND P+F S F
Sbjct: 1560 ETVQEYLLIVQALDQSSNVTERLQTSVTVRLRVLDANDNAPKFVSPNSSGGKTASLFISD 1619
Query: 113 EGQDGLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKAL 161
+ G V + A D D G N + Y + + F +++ TG I K+L
Sbjct: 1620 ATRIGEVVAHIVAVDEDSGDNGRLTYEITGGNGEGRFRINSQTGIIELVKSL 1671
>gi|25090185|sp|Q24292.3|DS_DROME RecName: Full=Protein dachsous; AltName: Full=Adherin; Flags:
Precursor
Length = 3503
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 31/182 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD----------NNTDAASYFNLDP 68
Y + + ++QV A+D D+G + YR++D +++D + +F + P
Sbjct: 988 YSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFP 1047
Query: 69 ATEH---QGPI----QDEGGLSSTATVN------------IRVTDINDKNPEFQSLPYEF 109
+ + P+ +D L+ AT N +RV D ND +P+FQ YEF
Sbjct: 1048 NSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEF 1107
Query: 110 SVPEG-QDGLAVGRVHATDADEGQNAVVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQ 167
+ E + G VG V A+D D G+NA + YS +P + F V TG+I T + LD E ++
Sbjct: 1108 RIEENLRRGSVVGVVTASDLDLGENAAIRYSLLPINSSFQVHPVTGEISTREPLDRELRE 1167
Query: 168 LY 169
LY
Sbjct: 1168 LY 1169
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 24/176 (13%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + + G +++QV A D+D G + Y L + A +F +DP T
Sbjct: 455 LYHANVMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRS 514
Query: 71 ---------EHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ +GG LSSTATV + + D+ND P F Y SV E + G
Sbjct: 515 HIDCETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVG 574
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
+ +V A+D D G NA+V Y++ E F V + +G+I LD+E++ Y
Sbjct: 575 RCILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSY 630
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV----- 140
TVNI + D+ND P F Y +VPE G +V +V+A+D D +N +V Y++
Sbjct: 218 TVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQS 277
Query: 141 PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ F +D TG I NKALD+E ++L+
Sbjct: 278 DKEQMFRIDPRTGAIYINKALDFETKELH 306
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 77/168 (45%), Gaps = 33/168 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI---------- 76
G + V A+D D G+ + Y LL N S F + P T + P+
Sbjct: 1116 GSVVGVVTASDLDLGENAAIRYSLLPIN----SSFQVHPVTGEISTREPLDRELRELYDL 1171
Query: 77 ----QDEGGLSSTATVNIR--VTDINDKNPEFQSLPYE--FSVPEGQD-GLAVGRVHATD 127
+D+G +A V +R V+D+ND PE P E SV E Q G V RV A D
Sbjct: 1172 VVEARDQGTPVRSARVPVRIHVSDVNDNAPEIAD-PQEDVVSVREEQPPGTEVVRVRAVD 1230
Query: 128 ADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
D GQNA + YS+ + F +D +G IRT LD+E++ +Y
Sbjct: 1231 RDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHEERSIY 1278
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
VNI V D+ND PEF++ SVPE + G + HA D D G + V YS+ ++
Sbjct: 864 VNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKESGK 923
Query: 146 --FVVDANTGDIRTNKALDYEKQQLY 169
F +DA +G + ++ LDYE Q +
Sbjct: 924 GLFAIDARSGHLILSQHLDYESSQRH 949
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 71/164 (43%), Gaps = 28/164 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------------HQGPIQ--- 77
++ V ATD D G FG V YR++ N A F +D +T P+
Sbjct: 686 IVAVVATDPDYGNFGQVSYRIVAGNE--AGIFRIDRSTGEIFVVRPDMLSVRTQPMHMLN 743
Query: 78 ----DEGGLSSTA--TVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADE 130
D G L S A V + + D + P F+ Y + V E G VG V A D
Sbjct: 744 ISATDGGNLRSNADAVVFLSIIDAMQRPPIFEKARYNYYVKEDIPRGTVVGSVIAASGDV 803
Query: 131 GQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYE-KQQLYL 170
+ V YS+ P F ++ N+G+IR K LD+E K Q+ L
Sbjct: 804 AHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLL 847
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+S A + I + D ND +P+F + +V EG + G V +VHA D+D G NA + Y +
Sbjct: 2249 LASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHI 2308
Query: 141 PE---DIPFVVD-ANTGDIRTNKALDYEKQQLYLERVF 174
+ D FV++ A +G +RTN LD E + +Y ++
Sbjct: 2309 VDGNHDNAFVIEPAFSGIVRTNIVLDREIRDIYKLKII 2346
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 71/166 (42%), Gaps = 25/166 (15%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY--------------RLLDNNTDA 60
D FY + +G +++V A+D D G +V Y R
Sbjct: 559 DQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEICI 618
Query: 61 ASYFNLDPATEHQGPI--QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
A + + + ++ P+ D GGLS+TA + +++TD+ND P F Y+ S+ E
Sbjct: 619 AGELDFERRSSYEFPVLATDRGGLSTTAMIKMQLTDVNDNRPVFYPREYKVSLRESPKAS 678
Query: 119 A------VGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
+ + V ATD D G V Y + E F +D +TG+I
Sbjct: 679 SQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGIFRIDRSTGEI 724
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L ++ ++ +R+TD+ND PEF+ Y +V E D G +V +V A D DEG N+ + YS+
Sbjct: 431 LHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAHDRDEGLNSALTYSL 490
Query: 141 PEDIP------FVVDANTGDIRTNKALDYEKQ 166
E P F +D TG I T +D E +
Sbjct: 491 AE-TPETHAQWFQIDPQTGLITTRSHIDCETE 521
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 83/195 (42%), Gaps = 51/195 (26%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
S + G++ D LG +++Q+ A D D G V RL+ ++L T+ Q
Sbjct: 1902 SKYTGSVQEDA-PLGTSVVQISAVDADLG----VNARLV---------YSLANETQWQFA 1947
Query: 76 IQDEGGL------------------------------SSTATVNIRVTDINDKNPEFQSL 105
I + GL S+T V I V DIND P F+
Sbjct: 1948 IDGQSGLITTVGKLDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERY 2007
Query: 106 PYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPED-----IPFVVDANTGDIRTNK 159
PY VP Q G + +V A DAD G NA + YS+ + F ++ +TG + ++
Sbjct: 2008 PYIGQVPALIQPGQTLLKVQALDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSASQ 2067
Query: 160 ALDYEKQQ-LYLERV 173
+L E + L+LE V
Sbjct: 2068 SLASESGKLLHLEVV 2082
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 86 ATVNIRVTDINDKNPEFQ-SLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
AT+ I V D+ND +PEF+ Y SVPE + + V A+D DEG NA + YS+
Sbjct: 1778 ATIYITVGDVNDNSPEFRPGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITGGN 1837
Query: 143 -DIPFVVDANTGDIRTNKALDYEKQQLY 169
F +D+++G++ + + LD E+ Y
Sbjct: 1838 LGNKFSIDSSSGEL-SARPLDREQHSRY 1864
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 22/145 (15%)
Query: 18 FYGAMAR----DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN------TDAAS----- 62
F +M R + ELG L A DKDSG G V Y L+ + DA S
Sbjct: 878 FEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKESGKGLFAIDARSGHLIL 937
Query: 63 --YFNLDPATEHQGPIQDEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ + + + H + G LS+ T+ + V D+ND P F+ Y +V E +
Sbjct: 938 SQHLDYESSQRHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRS 997
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV 140
+ +V+A+D D G NA + Y +
Sbjct: 998 INAQIIQVNASDLDTGNNARITYRI 1022
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 61/148 (41%), Gaps = 27/148 (18%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLD----PATEHQGPIQDEGGLSSTATVNIRVTDI 95
D+ SG LV RLLD + S F L+ T P SS TV I V D+
Sbjct: 1376 DRHSGN--LVVARLLDR--EVQSEFRLEIRALDTTASNNP------QSSAITVKIEVADV 1425
Query: 96 NDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP--------- 145
ND PE+ P + V E G + ATDAD G N + Y + P
Sbjct: 1426 NDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQA 1485
Query: 146 ---FVVDANTGDIRTNKALDYEKQQLYL 170
F +D+ TG + LD+E Q YL
Sbjct: 1486 MSLFRMDSLTGALSLQAPLDFEAVQEYL 1513
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 19/101 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------- 71
Y A + +G +++QV A+D D+ + GLVEY + +D F +DP T
Sbjct: 238 YFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAIYINKA 297
Query: 72 --------HQGPI----QDEGGLSSTATVNIRVTDINDKNP 100
H+ + E L +TA V+IRVTD+ND P
Sbjct: 298 LDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQP 338
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 25/157 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--FNLDPAT---------------- 70
+G ++ + A+D D G FG + Y + +D +S+ F +D +
Sbjct: 2824 VGSSVFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESGLVTSAFVFDYEQRQR 2883
Query: 71 -EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG---QDGLAVGRVHAT 126
+ + D GG ++ V + + ++ P+F Y F +P G VG+V AT
Sbjct: 2884 YDMELLASDMGGKKASVAVRVEIESRDEFTPQFTERTYRFVLPAAVALPQGYVVGQVTAT 2943
Query: 127 DADEGQNAVVYY--SVPEDIPFVVDANTGDIRTNKAL 161
D+D G + V Y S P F V+ ++G + + L
Sbjct: 2944 DSDSGPDGRVVYQLSAPHS-HFKVNRSSGAVLIKRKL 2979
Score = 42.7 bits (99), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 38/182 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
+ A + + G + QV A D D+G + Y ++D N D A F ++PA G ++
Sbjct: 2274 FVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHDNA--FVIEPA--FSGIVRT 2329
Query: 78 -------------------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEF-SVPEGQ 115
DEG ++ TAT+ +++ D+ND P F P +V E
Sbjct: 2330 NIVLDREIRDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTFP--PNNLVTVSEAT 2387
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE---DIP----FVVDANTGDIRTNKALDYEKQQ 167
+ G + + A D D A+ Y E DI F +D +G + + LDYE QQ
Sbjct: 2388 ELGAVITSISANDVDT-YPALTYRLGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQQ 2446
Query: 168 LY 169
Y
Sbjct: 2447 EY 2448
Score = 42.4 bits (98), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI 144
+ I V D ND P F+ Y SV E G +V ++ A DAD G NA + YS+ +
Sbjct: 1883 CNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLANET 1942
Query: 145 --PFVVDANTGDIRTNKALDYEKQQLY 169
F +D +G I T LD E Q Y
Sbjct: 1943 QWQFAIDGQSGLITTVGKLDRELQASY 1969
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 16/126 (12%)
Query: 54 LDNNTDAASYFNLDPA--TEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
LD ++ A SY + A + HQ P L S + + D ND P+F Y +
Sbjct: 2765 LDYDSGAKSYELIIRACDSHHQRP------LCSLQPFRLELHDENDNEPKFPLTEYVHFL 2818
Query: 112 PEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIP----FVVDANTGDIRTNKALDY 163
E + G +V R HA+D D+G + YS+ P D F VD+ +G + + DY
Sbjct: 2819 AENEPVGSSVFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESGLVTSAFVFDY 2878
Query: 164 EKQQLY 169
E++Q Y
Sbjct: 2879 EQRQRY 2884
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 37/183 (20%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT---------EHQ 73
R++ G +++V+A D+D G+ + Y ++ ++D F++DP + +H+
Sbjct: 1214 REEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHE 1273
Query: 74 -------GPIQDEGGLSSTATVN---IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGR 122
G +GG TV + V D+ND P F S F V E G VG
Sbjct: 1274 ERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGS 1333
Query: 123 VHATD--ADEGQNAV--------VYYSVPE------DIPFVVDANTGDIRTNKALDYEKQ 166
+ + AD +N+V V Y++ + F +D ++G++ + LD E Q
Sbjct: 1334 ISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQ 1393
Query: 167 QLY 169
+
Sbjct: 1394 SEF 1396
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 66/172 (38%), Gaps = 39/172 (22%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLL-------DNNTDAASYFNLDPAT---EHQGPIQD 78
+G + ATD D+G G ++YRL+ ++ A S F +D T Q P+
Sbjct: 1447 VGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDF 1506
Query: 79 EG-------------------GLSSTATVNIRVTDINDKNPEFQS-------LPYEFSVP 112
E L ++ TV +R+ D ND P F S F
Sbjct: 1507 EAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISD 1566
Query: 113 EGQDGLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKAL 161
+ G V + A D D G N + Y + + F +++ TG I K+L
Sbjct: 1567 ATRIGEVVAHIVAVDEDSGDNGQLTYEITGGNGEGRFRINSQTGIIELVKSL 1618
>gi|345788489|ref|XP_853733.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16 [Canis lupus
familiaris]
Length = 3295
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 82/162 (50%), Gaps = 28/162 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGP- 75
G +++V A D D G G V Y L +F++DP + E Q
Sbjct: 486 GSFVVRVMARDPDQGSNGQVTYSLAPGAH--TRWFSIDPTSGIITTAASLDYELEPQPQL 543
Query: 76 --IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ +GGL +S+ATV++ + D+ND P+FQ Y S+PEG Q G +V ATDAD
Sbjct: 544 IVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDAD 603
Query: 130 EGQNAVVYYSV------PEDIPFVVDANTGDIRTNKALDYEK 165
G ++ YS+ P PF +DA+TGD+ T + LD ++
Sbjct: 604 SGPFGLLSYSLGAGLGAPGSPPFRIDAHTGDVCTTRTLDRDQ 645
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 22/161 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT--DAASYFNLDPAT--- 70
SL ++A ++ G + + A D D+G FG + Y LL+ + F L+ +T
Sbjct: 2706 SLLSTSLAENQPP-GTLVTTLHAIDGDAGAFGRLRYTLLEAGPGPEGREAFALNSSTGEL 2764
Query: 71 --------EHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
EH G Q D G LS++ TV++ VT ++ +P F + + F VPEG +
Sbjct: 2765 RARVAFDYEHTGSFQLLVGAADAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQVPEGAR 2824
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDI 155
G ++G V ATD D G + +V YS+ P F ++ TG +
Sbjct: 2825 RGYSLGHVQATDEDGGADGLVLYSLATSSPYFGINQTTGAL 2865
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 78/177 (44%), Gaps = 27/177 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + R+ G +L+ ++ATD D G G V Y + + F+LDP T
Sbjct: 1651 YSVLLRENSPPGTSLLTLRATDPDLGANGQVTYGGISGES-----FSLDPDTGVLTTLRA 1705
Query: 71 ---EHQGPI------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
E Q I +D G L + TV + V D ND P F S VPEGQD
Sbjct: 1706 LDREEQEEINLTVYARDRGSPPLLTHVTVRVAVEDENDHAPTFGSAHLSLEVPEGQDPQT 1765
Query: 120 VGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ + A+D D G N + Y + + FV+D +G+ T + LD E + + R+
Sbjct: 1766 LTVLRASDPDVGANGQLQYRILDGDSSGAFVLDLTSGEFGTMRPLDREVEPAFQLRI 1822
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 67/148 (45%), Gaps = 30/148 (20%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL-------------LDNNT-DAASY 63
FY A + + G +QV ATD DSG FGL+ Y L +D +T D +
Sbjct: 579 FYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGAPGSPPFRIDAHTGDVCTT 638
Query: 64 FNLDPATEHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV---P 112
LD QGP D GGL S V + V+D ND P+F P+E++
Sbjct: 639 RTLD---RDQGPSSFDFTVTAVDGGGLKSMVYVKVFVSDENDNPPQF--YPWEYAASLSA 693
Query: 113 EGQDGLAVGRVHATDADEGQNAVVYYSV 140
+ G AV RV A D D+G + + Y +
Sbjct: 694 QSTPGTAVLRVRAHDPDQGPHGRLTYHI 721
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 20/173 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL---------------DPATEHQGPI 76
TL ++A+D D G G ++YR+LD ++ A +L +PA + +
Sbjct: 1765 TLTVLRASDPDVGANGQLQYRILDGDSSGAFVLDLTSGEFGTMRPLDREVEPAFQLRIEA 1824
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQN 133
+D G LS+T V + V D ND P F Y VPE G + ++ A D D G N
Sbjct: 1825 RDGGQPALSATLLVTVTVLDANDHAPAFPVPAYSVEVPEDAPAGTLLLQLQAHDPDAGAN 1884
Query: 134 AVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSYL 184
V Y + F+++ ++G++RT ALD E+ Y V + A L
Sbjct: 1885 GRVTYYLGTGAAGAFLLEPSSGELRTAIALDREQCSSYAFSVSAVDGAAAGPL 1937
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 72/160 (45%), Gaps = 24/160 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDA---ASYFNLDPATEHQGP 75
+G L+ V+A+D D G GLV + L LD N+ A A + + HQ
Sbjct: 2614 VGAELLHVEASDADPGPHGLVRFTLSSGDPSGLFELDENSGALRLARPLDCETQARHQLV 2673
Query: 76 IQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEG 131
+Q G + A V I V D+ND P F S+ E Q G V +HA D D G
Sbjct: 2674 VQAADPAGAHFALAPVTIEVQDVNDHGPVFPLSLLSTSLAENQPPGTLVTTLHAIDGDAG 2733
Query: 132 QNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYE 164
+ Y++ E P F ++++TG++R A DYE
Sbjct: 2734 AFGRLRYTLLEAGPGPEGREAFALNSSTGELRARVAFDYE 2773
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 69/158 (43%), Gaps = 30/158 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQGPI------------ 76
G L+Q++A D D+G G V Y L T AA F L+P++ E + I
Sbjct: 1868 GTLLLQLQAHDPDAGANGRVTYYL---GTGAAGAFLLEPSSGELRTAIALDREQCSSYAF 1924
Query: 77 -------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-----GQDGLAVGRVH 124
G LS+T V I V D+ND P F + P +P LA+ +
Sbjct: 1925 SVSAVDGAAAGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGPSLSTPTLALATLR 1984
Query: 125 ATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKA 160
A D D G NA + Y + P VD+ TG+IR ++
Sbjct: 1985 AEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARS 2022
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 73/167 (43%), Gaps = 32/167 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQ----- 73
G ++QV+A D G + Y L + +S F L+P T E Q
Sbjct: 1013 GTQVLQVRAQAPDGGP---ITYHLAADG--PSSPFGLEPQTGWLWVRAALDREAQELYTL 1067
Query: 74 ------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
G + G + TATV + + + ND +P P +V E Q G +VGRV AT
Sbjct: 1068 KVMAVSGSKAELGQQTGTATVRVSILNQNDHSPRLSEEPTFLAVAENQPPGTSVGRVFAT 1127
Query: 127 DADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D D G N + YS+ + F + TG++ T + LD E+Q Y
Sbjct: 1128 DRDSGPNGRLTYSLRPLSEDSKAFRIHPQTGEMTTLQTLDRERQSSY 1174
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A +++ + DIND P F Y V E G V +V+A+DAD G N V Y +
Sbjct: 236 ALLDVTLLDINDHAPAFNQSRYHAVVSESLAPGSPVLQVYASDADAGANGAVTYEINRRQ 295
Query: 143 ---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D PF +DA+TG +R + LD+E+++++
Sbjct: 296 SEGDGPFSIDAHTGLLRLERPLDFEQRRVH 325
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 72/181 (39%), Gaps = 46/181 (25%)
Query: 30 GVTLMQVKATDKDSGK-FGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------ 82
G TL+ ++ATD D + V+Y ++ N F L+P G + GGL
Sbjct: 2495 GSTLLTLEATDADGSRTHATVDYSIVSGNR--GRVFQLEPRLAETG---EGGGLGPRALG 2549
Query: 83 ------------------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
SS V + V D+ND P F Y +VP
Sbjct: 2550 CLVLLESLDFESLTQYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASYRMAVP 2609
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E G + V A+DAD G + +V +++ P F +D N+G +R + LD E Q
Sbjct: 2610 EDTPVGAELLHVEASDADPGPHGLVRFTLSSGDPSGLFELDENSGALRLARPLDCETQAR 2669
Query: 169 Y 169
+
Sbjct: 2670 H 2670
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 71/160 (44%), Gaps = 27/160 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYF-NLDP----------- 68
G + V A D D G+ V YRL L + T A S +LD
Sbjct: 1558 GPVALHVVARDPDLGEAARVSYRLAAGGDGYFRLHSGTGALSVVRSLDREQRAEHLLTVV 1617
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
A++H P + S+T + + V D+ND+ P FQ Y + E G ++ + ATD
Sbjct: 1618 ASDHGSPPR-----SATQLLTVSVADVNDEAPAFQQQEYSVLLRENSPPGTSLLTLRATD 1672
Query: 128 ADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQ 167
D G N V Y F +D +TG + T +ALD E+Q+
Sbjct: 1673 PDLGANGQVTYGGISGESFSLDPDTGVLTTLRALDREEQE 1712
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 35/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G ++ +V ATD+DSG G + Y L + D+ + F + P T E Q
Sbjct: 1118 GTSVGRVFATDRDSGPNGRLTYSLRPLSEDSKA-FRIHPQTGEMTTLQTLDRERQSSYQL 1176
Query: 76 ---IQDEGG--LSSTATVNIRVTDINDKNPEF--------QSLPYEF--SVPEGQDGLAV 120
+QD G S+T TV+I V D+ND +P F LP + VP G V
Sbjct: 1177 LVQVQDGGSPPRSTTGTVHIAVLDLNDNSPSFLQASGAAGGGLPVQVPDRVPPGT---LV 1233
Query: 121 GRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ A D DEG+N + Y++ P F + ++G++ T L ++ Y+
Sbjct: 1234 TTLQAKDPDEGENGTILYTLTGPGSELFSLHPHSGELLTAAPLIRAERPHYV 1285
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 76/179 (42%), Gaps = 32/179 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG---- 74
Y A + G +++V+A D D G G + Y +L N F LD EH G
Sbjct: 687 YAASLSAQSTPGTAVLRVRAHDPDQGPHGRLTYHILAGNN--PPLFALD---EHSGLLTV 741
Query: 75 --PI--------------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ QD GGL + +A VN+ + P F+ L Y FSVPE
Sbjct: 742 AWPLARRANSVVQLEIGAQDGGGLQAEPSARVNVSIVPGTPVPPVFEQLQYVFSVPEDVA 801
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
G +VG V A + G+ V ++ P F +D +G ++T + LD E LE
Sbjct: 802 PGTSVGIVQARNP-PGRLGSVTLALSGGDPRGLFSLDGASGLLQTLRPLDRELLGPVLE 859
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 28/135 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------------ATEHQGP-- 75
G ++ V ATD+DSG G + Y L A F++DP A H+GP
Sbjct: 2389 GSAILSVSATDQDSGANGHISYHL----ASPAEGFSVDPNNGTLFTTVGTVALGHEGPGV 2444
Query: 76 ------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHAT 126
+D G G ++ ATV++++ D ND P F Y +V E G + + AT
Sbjct: 2445 VDVVLEARDHGMPGRAARATVHVQLQDQNDHTPSFTLPHYRVAVTEDLPPGSTLLTLEAT 2504
Query: 127 DADEGQ-NAVVYYSV 140
DAD + +A V YS+
Sbjct: 2505 DADGSRTHATVDYSI 2519
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 71/180 (39%), Gaps = 39/180 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + L L+QV+A D D G G + Y L + A F++DP
Sbjct: 2173 YVAFLPESRPLEGPLLQVEADDLDQGPSGQISYSLAASQP-ARGLFHVDPATGTITTTAI 2231
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
AT+ P L +AT+ + V D ND P P+E V E
Sbjct: 2232 LDREIWAETRLVLMATDRGSP-----ALVGSATLTVMVIDTNDNRPTIPQ-PWELRVSED 2285
Query: 114 GQDGLAVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + +V D D G V++Y S P+D PF + G + LD+E++ Y
Sbjct: 2286 ALLGSEIAQVTGNDVDSG--PVLWYVLSPSGPQD-PFSIGRYGGRLSLTGPLDFEQRDRY 2342
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 82 LSSTATVNIRVTDINDKNPEF-------QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
L + AT + VTD+ND P F + LP E ++P G V RV A D D+G N
Sbjct: 449 LRAEATFVLHVTDVNDNAPTFDRQLYRPEPLP-EVALP----GSFVVRVMARDPDQGSNG 503
Query: 135 VVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
V YS+ F +D +G I T +LDYE
Sbjct: 504 QVTYSLAPGAHTRWFSIDPTSGIITTAASLDYE 536
Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 69/173 (39%), Gaps = 31/173 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH----------------- 72
G + ++A D D+G V + LL A F +DP T H
Sbjct: 907 GTPIYTLRALDPDAGINSRVTFTLLAGGGGA---FTVDPTTGHVRLMGPLGPPGGPAHEL 963
Query: 73 QGPIQDEGGLSSTATVNIRVT--DINDKN--PEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
+ +D G T+ +RV D+ + P F S Y +P G G V +V A
Sbjct: 964 ELEARDGGSPPRTSHFRLRVVVQDLGTRGLAPHFDSPTYRVDLPSGTTPGTQVLQVRAQA 1023
Query: 128 ADEGQNAVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D G + Y + D PF ++ TG + ALD E Q+LY +V +S
Sbjct: 1024 PDGGP---ITYHLAADGPSSPFGLEPQTGWLWVRAALDREAQELYTLKVMAVS 1073
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD-EGQNAVVYYSVPEDIP 145
V +RV D N+ P F P ++PE D G A+ A+DAD G N+ V Y + P
Sbjct: 1419 VQVRVQDENEHAPAFARDPLALALPENPDPGAALYTFRASDADGPGPNSDVRYRLLRQEP 1478
Query: 146 FV----VDANTGDIRTNKALDYEKQQLYL 170
V +DA TG + + LD E L
Sbjct: 1479 PVPALRLDARTGALSAPRGLDREATPALL 1507
>gi|449691455|ref|XP_004212679.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog,
partial [Hydra magnipapillata]
Length = 898
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 59/92 (64%), Gaps = 2/92 (2%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVY 137
+G + ++T+ I +TD+ND+ P+F PY V E Q +G VG V ATD DEG+N+++
Sbjct: 30 DGERTGSSTIKIIITDVNDEAPKFNDGPYLRVVQENQKEGAIVGYVTATDQDEGENSIIT 89
Query: 138 YSVPEDIP-FVVDANTGDIRTNKALDYEKQQL 168
YS+ + FV+D NTG IRT+K LD E +
Sbjct: 90 YSLLQSAERFVIDPNTGLIRTSKVLDRESDKF 121
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 80/183 (43%), Gaps = 40/183 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y + ++ + G + V ATD+D G+ ++ Y LL +A F +DP
Sbjct: 58 YLRVVQENQKEGAIVGYVTATDQDEGENSIITYSLLQ----SAERFVIDPNTGLIRTSKV 113
Query: 69 ----------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
AT+H G + L+S+ V I VTD ND+ P F YE ++
Sbjct: 114 LDRESDKFNNFTIIVAATDHGG----KNSLTSSVEVIILVTDANDQYPYFVPKVYEATLL 169
Query: 113 EGQ-DGLAVGRVHATDADEGQ--NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQ 166
E G V V A D DE N + YS+ + P F +D +TG I LDYEK+
Sbjct: 170 ECTFIGDHVTTVTAKDDDEINTVNTELIYSITSGNTPRRFRIDPDTGLITVAHRLDYEKE 229
Query: 167 QLY 169
+ Y
Sbjct: 230 KRY 232
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 10/98 (10%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV---P 141
ATV + + D ND +P+F+ Y+ V E + G + ATD+D G N + + +
Sbjct: 252 ATVTVLINDCNDNSPQFELPTYQGDVKEDVKIGFVLIEATATDSDIGINGMFDFFIVDAD 311
Query: 142 EDIPFVV------DANTGDIRTNKALDYEKQQLYLERV 173
E+ F + + N I+ + LD EKQ Y R+
Sbjct: 312 ENYHFTIVKKSSLEQNIALIKVDWRLDREKQNQYTFRI 349
>gi|24580686|ref|NP_523446.2| dachsous [Drosophila melanogaster]
gi|22945533|gb|AAF51468.3| dachsous [Drosophila melanogaster]
Length = 3556
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 31/182 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD----------NNTDAASYFNLDP 68
Y + + ++QV A+D D+G + YR++D +++D + +F + P
Sbjct: 1041 YSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFP 1100
Query: 69 ATEH---QGPI----QDEGGLSSTATVN------------IRVTDINDKNPEFQSLPYEF 109
+ + P+ +D L+ AT N +RV D ND +P+FQ YEF
Sbjct: 1101 NSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEF 1160
Query: 110 SVPEG-QDGLAVGRVHATDADEGQNAVVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQ 167
+ E + G VG V A+D D G+NA + YS +P + F V TG+I T + LD E ++
Sbjct: 1161 RIEENLRRGSVVGVVTASDLDLGENAAIRYSLLPINSSFQVHPVTGEISTREPLDRELRE 1220
Query: 168 LY 169
LY
Sbjct: 1221 LY 1222
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 24/176 (13%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + + G +++QV A D+D G + Y L + A +F +DP T
Sbjct: 508 LYHANVMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRS 567
Query: 71 ---------EHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ +GG LSSTATV + + D+ND P F Y SV E + G
Sbjct: 568 HIDCETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVG 627
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
+ +V A+D D G NA+V Y++ E F V + +G+I LD+E++ Y
Sbjct: 628 RCILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSY 683
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV----- 140
TVNI + D+ND P F Y +VPE G +V +V+A+D D +N +V Y++
Sbjct: 271 TVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQS 330
Query: 141 PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ F +D TG I NKALD+E ++L+
Sbjct: 331 DKEQMFRIDPRTGAIYINKALDFETKELH 359
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 77/168 (45%), Gaps = 33/168 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI---------- 76
G + V A+D D G+ + Y LL N S F + P T + P+
Sbjct: 1169 GSVVGVVTASDLDLGENAAIRYSLLPIN----SSFQVHPVTGEISTREPLDRELRELYDL 1224
Query: 77 ----QDEGGLSSTATVNIR--VTDINDKNPEFQSLPYE--FSVPEGQD-GLAVGRVHATD 127
+D+G +A V +R V+D+ND PE P E SV E Q G V RV A D
Sbjct: 1225 VVEARDQGTPVRSARVPVRIHVSDVNDNAPEIAD-PQEDVVSVREEQPPGTEVVRVRAVD 1283
Query: 128 ADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
D GQNA + YS+ + F +D +G IRT LD+E++ +Y
Sbjct: 1284 RDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHEERSIY 1331
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
VNI V D+ND PEF++ SVPE + G + HA D D G + V YS+ ++
Sbjct: 917 VNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKESGK 976
Query: 146 --FVVDANTGDIRTNKALDYEKQQLY 169
F +DA +G + ++ LDYE Q +
Sbjct: 977 GLFAIDARSGHLILSQHLDYESSQRH 1002
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 71/164 (43%), Gaps = 28/164 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------------HQGPIQ--- 77
++ V ATD D G FG V YR++ N A F +D +T P+
Sbjct: 739 IVAVVATDPDYGNFGQVSYRIVAGN--EAGIFRIDRSTGEIFVVRPDMLSVRTQPMHMLN 796
Query: 78 ----DEGGLSSTA--TVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADE 130
D G L S A V + + D + P F+ Y + V E G VG V A D
Sbjct: 797 ISATDGGNLRSNADAVVFLSIIDAMQRPPIFEKARYNYYVKEDIPRGTVVGSVIAASGDV 856
Query: 131 GQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYE-KQQLYL 170
+ V YS+ P F ++ N+G+IR K LD+E K Q+ L
Sbjct: 857 AHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLL 900
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+S A + I + D ND +P+F + +V EG + G V +VHA D+D G NA + Y +
Sbjct: 2302 LASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHI 2361
Query: 141 PE---DIPFVVD-ANTGDIRTNKALDYEKQQLYLERVF 174
+ D FV++ A +G +RTN LD E + +Y ++
Sbjct: 2362 VDGNHDNAFVIEPAFSGIVRTNIVLDREIRDIYKLKII 2399
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 71/166 (42%), Gaps = 25/166 (15%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY--------------RLLDNNTDA 60
D FY + +G +++V A+D D G +V Y R
Sbjct: 612 DQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEICI 671
Query: 61 ASYFNLDPATEHQGPI--QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
A + + + ++ P+ D GGLS+TA + +++TD+ND P F Y+ S+ E
Sbjct: 672 AGELDFERRSSYEFPVLATDRGGLSTTAMIKMQLTDVNDNRPVFYPREYKVSLRESPKAS 731
Query: 119 A------VGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
+ + V ATD D G V Y + E F +D +TG+I
Sbjct: 732 SQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGIFRIDRSTGEI 777
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L ++ ++ +R+TD+ND PEF+ Y +V E D G +V +V A D DEG N+ + YS+
Sbjct: 484 LHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAHDRDEGLNSALTYSL 543
Query: 141 PEDIP-----FVVDANTGDIRTNKALDYEKQ 166
E F +D TG I T +D E +
Sbjct: 544 AETPETHAQWFQIDPQTGLITTRSHIDCETE 574
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 83/195 (42%), Gaps = 51/195 (26%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
S + G++ D LG +++Q+ A D D G V RL+ ++L T+ Q
Sbjct: 1955 SKYTGSVQEDA-PLGTSVVQISAVDADLG----VNARLV---------YSLANETQWQFA 2000
Query: 76 IQDEGGL------------------------------SSTATVNIRVTDINDKNPEFQSL 105
I + GL S+T V I V DIND P F+
Sbjct: 2001 IDGQSGLITTVGKLDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERY 2060
Query: 106 PYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPED-----IPFVVDANTGDIRTNK 159
PY VP Q G + +V A DAD G NA + YS+ + F ++ +TG + ++
Sbjct: 2061 PYIGQVPALIQPGQTLLKVQALDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSASQ 2120
Query: 160 ALDYEKQQ-LYLERV 173
+L E + L+LE V
Sbjct: 2121 SLASESGKLLHLEVV 2135
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 86 ATVNIRVTDINDKNPEFQ-SLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
AT+ I V D+ND +PEF+ Y SVPE + + V A+D DEG NA + YS+
Sbjct: 1831 ATIYITVGDVNDNSPEFRPGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITGGN 1890
Query: 143 -DIPFVVDANTGDIRTNKALDYEKQQLY 169
F +D+++G++ + + LD E+ Y
Sbjct: 1891 LGNKFSIDSSSGEL-SARPLDREQHSRY 1917
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 22/145 (15%)
Query: 18 FYGAMAR----DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN------TDAAS----- 62
F +M R + ELG L A DKDSG G V Y L+ + DA S
Sbjct: 931 FEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKESGKGLFAIDARSGHLIL 990
Query: 63 --YFNLDPATEHQGPIQDEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ + + + H + G LS+ T+ + V D+ND P F+ Y +V E +
Sbjct: 991 SQHLDYESSQRHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRS 1050
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV 140
+ +V+A+D D G NA + Y +
Sbjct: 1051 INAQIIQVNASDLDTGNNARITYRI 1075
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 61/148 (41%), Gaps = 27/148 (18%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLD----PATEHQGPIQDEGGLSSTATVNIRVTDI 95
D+ SG LV RLLD + S F L+ T P SS TV I V D+
Sbjct: 1429 DRHSGN--LVVARLLDR--EVQSEFRLEIRALDTTASNNP------QSSAITVKIEVADV 1478
Query: 96 NDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP--------- 145
ND PE+ P + V E G + ATDAD G N + Y + P
Sbjct: 1479 NDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQA 1538
Query: 146 ---FVVDANTGDIRTNKALDYEKQQLYL 170
F +D+ TG + LD+E Q YL
Sbjct: 1539 MSLFRMDSLTGALSLQAPLDFEAVQEYL 1566
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 19/101 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------- 71
Y A + +G +++QV A+D D+ + GLVEY + +D F +DP T
Sbjct: 291 YFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAIYINKA 350
Query: 72 --------HQGPI----QDEGGLSSTATVNIRVTDINDKNP 100
H+ + E L +TA V+IRVTD+ND P
Sbjct: 351 LDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQP 391
Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 25/157 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--FNLDPAT---------------- 70
+G ++ + A+D D G FG + Y + +D +S+ F +D +
Sbjct: 2877 VGSSVFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESGLVTSAFVFDYEQRQR 2936
Query: 71 -EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG---QDGLAVGRVHAT 126
+ + D GG ++ V + + ++ P+F Y F +P G VG+V AT
Sbjct: 2937 YDMELLASDMGGKKASVAVRVEIESRDEFTPQFTERTYRFVLPAAVALPQGYVVGQVTAT 2996
Query: 127 DADEGQNAVVYY--SVPEDIPFVVDANTGDIRTNKAL 161
D+D G + V Y S P F V+ ++G + + L
Sbjct: 2997 DSDSGPDGRVVYQLSAPHS-HFKVNRSSGAVLIKRKL 3032
Score = 42.7 bits (99), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 74/171 (43%), Gaps = 38/171 (22%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------------ 77
G + QV A D D+G + Y ++D N D A F ++PA G ++
Sbjct: 2338 GTFVAQVHAFDSDAGSNARLRYHIVDGNHDNA--FVIEPA--FSGIVRTNIVLDREIRDI 2393
Query: 78 --------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEF-SVPEGQD-GLAVGRVHA 125
DEG ++ TAT+ +++ D+ND P F P +V E + G + + A
Sbjct: 2394 YKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTFP--PNNLVTVSEATELGAVITSISA 2451
Query: 126 TDADEGQNAVVYYSVPE---DIP----FVVDANTGDIRTNKALDYEKQQLY 169
D D A+ Y E DI F +D +G + + LDYE QQ Y
Sbjct: 2452 NDVDT-YPALTYRLGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQQEY 2501
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI 144
+ I V D ND P F+ Y SV E G +V ++ A DAD G NA + YS+ +
Sbjct: 1936 CNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLANET 1995
Query: 145 --PFVVDANTGDIRTNKALDYEKQQLY 169
F +D +G I T LD E Q Y
Sbjct: 1996 QWQFAIDGQSGLITTVGKLDRELQASY 2022
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 16/126 (12%)
Query: 54 LDNNTDAASYFNLDPA--TEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
LD ++ A SY + A + HQ P L S + + D ND P+F Y +
Sbjct: 2818 LDYDSGAKSYELIIRACDSHHQRP------LCSLQPFRLELHDENDNEPKFPLTEYVHFL 2871
Query: 112 PEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIP----FVVDANTGDIRTNKALDY 163
E + G +V R HA+D D+G + YS+ P D F VD+ +G + + DY
Sbjct: 2872 AENEPVGSSVFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSESGLVTSAFVFDY 2931
Query: 164 EKQQLY 169
E++Q Y
Sbjct: 2932 EQRQRY 2937
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 37/183 (20%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT---------EHQ 73
R++ G +++V+A D+D G+ + Y ++ ++D F++DP + +H+
Sbjct: 1267 REEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHE 1326
Query: 74 -------GPIQDEGGLSSTATVN---IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGR 122
G +GG TV + V D+ND P F S F V E G VG
Sbjct: 1327 ERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGS 1386
Query: 123 VHATD--ADEGQNAV--------VYYSVPE------DIPFVVDANTGDIRTNKALDYEKQ 166
+ + AD +N+V V Y++ + F +D ++G++ + LD E Q
Sbjct: 1387 ISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQ 1446
Query: 167 QLY 169
+
Sbjct: 1447 SEF 1449
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 66/172 (38%), Gaps = 39/172 (22%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLL-------DNNTDAASYFNLDPAT---EHQGPIQD 78
+G + ATD D+G G ++YRL+ ++ A S F +D T Q P+
Sbjct: 1500 VGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDF 1559
Query: 79 EG-------------------GLSSTATVNIRVTDINDKNPEFQS-------LPYEFSVP 112
E L ++ TV +R+ D ND P F S F
Sbjct: 1560 EAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISD 1619
Query: 113 EGQDGLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKAL 161
+ G V + A D D G N + Y + + F +++ TG I K+L
Sbjct: 1620 ATRIGEVVAHIVAVDEDSGDNGQLTYEITGGNGEGRFRINSQTGIIELVKSL 1671
>gi|13786140|ref|NP_112610.1| cadherin EGF LAG seven-pass G-type receptor 3 precursor [Rattus
norvegicus]
gi|22095544|sp|O88278.1|CELR3_RAT RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 3;
AltName: Full=Multiple epidermal growth factor-like
domains protein 2; Short=Multiple EGF-like domains
protein 2; Flags: Precursor
gi|3449288|dbj|BAA32459.1| MEGF2 [Rattus norvegicus]
Length = 3313
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 85/176 (48%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGP 75
Y A R+ +++V ATDKD GLV Y ++ N+ +F +D T + P
Sbjct: 541 YVAQVREDVRPHTVVLRVTATDKDKDANGLVHYNIISGNSRG--HFAIDSLTGEIQVMAP 598
Query: 76 I--------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ QD G ++T +I+V DIND +P F S P++ SV E G
Sbjct: 599 LDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHSPIFVSTPFQVSVLENAPLG 658
Query: 118 LAVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+V + A DAD G+N+ + YS V D PFV+++ TG + + LD E + Y
Sbjct: 659 HSVIHIQAVDADHGENSRLEYSLTGVASDTPFVINSATGWVSVSGPLDRESVEHYF 714
Score = 59.3 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 56/185 (30%), Positives = 86/185 (46%), Gaps = 32/185 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN---NTDAASYFNLDPAT----- 70
Y R+ E G ++Q++ATD D+ + YR + + T AA+ F +DP +
Sbjct: 429 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGSPAARTAAAAAFEIDPRSGLIST 488
Query: 71 ------EH------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH QG Q+ G S+T V+I V D ND P+F Y V
Sbjct: 489 SGRVDREHMESYELVVEASDQG--QEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVR 546
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E + V RV ATD D+ N +V+Y++ F +D+ TG+I+ LD+E ++
Sbjct: 547 EDVRPHTVVLRVTATDKDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVMAPLDFEAERE 606
Query: 169 YLERV 173
Y R+
Sbjct: 607 YALRI 611
Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQG 74
+++Q+ ATD+D+ G V+Y N D F ++P + E
Sbjct: 970 SVLQISATDRDAHANGRVQYTF-QNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTA 1028
Query: 75 PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G L + ++ + V D+ND P F + +E V E G V ++ A D D+G
Sbjct: 1029 YAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDDG 1088
Query: 132 QNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE +Q Y+
Sbjct: 1089 PNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYV 1130
Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V+I +TD N P FQS Y S+ E + G V + A+D D G+NA + Y + +++P
Sbjct: 835 VHINITDANTHRPVFQSAHYSVSMNEDRPVGSTVVVISASDDDVGENARITYLLEDNLPQ 894
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DA++G I LDYE Q Y
Sbjct: 895 FRIDADSGAITLQAPLDYEDQVTY 918
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEH 72
S Y + +G T++ + A+D D G+ + Y L DN F +D A
Sbjct: 851 SAHYSVSMNEDRPVGSTVVVISASDDDVGENARITYLLEDN----LPQFRIDADSGAITL 906
Query: 73 QGPIQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQD 116
Q P+ E ++ T + R V D+ND P+F + Y V E
Sbjct: 907 QAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAP 966
Query: 117 GL-AVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ++ ATD D N V Y+ D F ++ +G +RT + LD E +Y
Sbjct: 967 PFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVY 1024
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 29/180 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT------- 70
Y + + G +++V A D D G+ G + Y L N+ + F++DP +
Sbjct: 321 YQTLVPENEAAGTAVLRVVAQDPDPGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 380
Query: 71 --------EHQGPI--QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
H + QD G LS+T V + V D ND P F+ Y ++ E ++G
Sbjct: 381 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRENVEEG 440
Query: 118 LAVGRVHATDADEGQNAVVYY--------SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ ++ ATD D NA + Y F +D +G I T+ +D E + Y
Sbjct: 441 YPILQLRATDGDAPPNANLRYRFVGSPAARTAAAAAFEIDPRSGLISTSGRVDREHMESY 500
Score = 43.5 bits (101), Expect = 0.039, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 70/176 (39%), Gaps = 28/176 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI--------- 76
LG +++ ++A D D G+ +EY L +D F ++ AT GP+
Sbjct: 657 LGHSVIHIQAVDADHGENSRLEYSLTGVASDTP--FVINSATGWVSVSGPLDRESVEHYF 714
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDAD 129
+D G LS++A+V + V D+ND PEF Y + E + V T D
Sbjct: 715 FGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNE-DAAVGTSVVSVTAVD 773
Query: 130 EGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
N+ + Y + G + LDY KQ+ Y + V S A
Sbjct: 774 RDANSAISYQITGGNTRNRFAISTQGGMGLVTLALPLDY-KQERYFKLVLTASDRA 828
Score = 42.4 bits (98), Expect = 0.078, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVD 149
+++P+F Y+ VPE + G AV RV A D D G+ + YS+ + F +D
Sbjct: 311 NRHPQFPQYNYQTLVPENEAAGTAVLRVVAQDPDPGEAGRLVYSLAALMNSRSLELFSID 370
Query: 150 ANTGDIRTNKALDYEKQQLYLERV 173
+G IRT ALD E + + RV
Sbjct: 371 PQSGLIRTAAALDRESMERHYLRV 394
Score = 37.4 bits (85), Expect = 2.4, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 20/154 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPI- 76
+G + Q+ A D D G + Y++++ N + + +LD + I
Sbjct: 1073 VGSVVAQITAVDPDDGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIV 1132
Query: 77 --QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFS--VPEGQDGLA---VGRVHATDAD 129
L S ATV++R+ D ND +P + F+ V D +GR+ A D D
Sbjct: 1133 VQATSAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPD 1192
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALD 162
+ + ++ VV+ +G++R ++ LD
Sbjct: 1193 VSDHLFYSFERGNELQLLVVNQTSGELRLSRKLD 1226
>gi|444707751|gb|ELW48953.1| Cadherin-10 [Tupaia chinensis]
Length = 764
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 85/186 (45%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 140 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 198
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F V E
Sbjct: 199 PNMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESS 258
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G +G V ATDAD G+NA V Y + + DI D G I K LDYE ++
Sbjct: 259 PVGTPIGSVKATDADTGKNAEVEYRIIDGDGTDMFDIITEKDTQEGVITVKKPLDYESRR 318
Query: 168 LYLERV 173
LY +V
Sbjct: 319 LYTLKV 324
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 124 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 183
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 184 YFSVEPETGIIRT 196
>gi|4887715|gb|AAA79329.2| adherin [Drosophila melanogaster]
Length = 3503
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 31/182 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD----------NNTDAASYFNLDP 68
Y + + ++QV A+D D+G + YR++D +++D + +F + P
Sbjct: 988 YSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFP 1047
Query: 69 ATEH---QGPI----QDEGGLSSTATVN------------IRVTDINDKNPEFQSLPYEF 109
+ + P+ +D L+ AT N +RV D ND +P+FQ YEF
Sbjct: 1048 NSGWIYLRAPLDRETRDRYQLTILATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEF 1107
Query: 110 SVPEG-QDGLAVGRVHATDADEGQNAVVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQ 167
+ E + G VG V A+D D G+NA + YS +P + F V TG+I T + LD E ++
Sbjct: 1108 RIEENLRRGSVVGVVTASDLDLGENAAIRYSLLPINSSFQVHPVTGEISTREPLDRELRE 1167
Query: 168 LY 169
LY
Sbjct: 1168 LY 1169
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 24/176 (13%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + + G +++QV A D+D G + Y L + A +F +DP T
Sbjct: 455 LYHANVMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRS 514
Query: 71 ---------EHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ +GG LSSTATV + + D+ND P F Y SV E + G
Sbjct: 515 HIDCETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVG 574
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
+ +V A+D D G NA+V Y++ E F V + +G+I LD+E++ Y
Sbjct: 575 RCILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSY 630
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV----- 140
TVNI + D+ND P F Y +VPE G +V +V+A+D D +N +V Y++
Sbjct: 218 TVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQS 277
Query: 141 PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ F +D TG I NKALD+E ++L+
Sbjct: 278 DKEQMFRIDPRTGAIYINKALDFETKELH 306
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 77/168 (45%), Gaps = 33/168 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI---------- 76
G + V A+D D G+ + Y LL N S F + P T + P+
Sbjct: 1116 GSVVGVVTASDLDLGENAAIRYSLLPIN----SSFQVHPVTGEISTREPLDRELRELYDL 1171
Query: 77 ----QDEGGLSSTATVNIR--VTDINDKNPEFQSLPYE--FSVPEGQD-GLAVGRVHATD 127
+D+G +A V +R V+D+ND PE P E SV E Q G V RV A D
Sbjct: 1172 VVEARDQGTPVRSARVPVRIHVSDVNDNAPEIAD-PQEDVVSVREEQPPGTEVVRVRAVD 1230
Query: 128 ADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
D GQNA + YS+ + F +D +G IRT LD+E++ +Y
Sbjct: 1231 RDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHEERSIY 1278
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
VNI V D+ND PEF++ SVPE + G + HA D D G + V YS+ ++
Sbjct: 864 VNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKESGK 923
Query: 146 --FVVDANTGDIRTNKALDYEKQQLY 169
F +DA +G + ++ LDYE Q +
Sbjct: 924 GLFAIDARSGHLILSQHLDYESSQRH 949
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 71/164 (43%), Gaps = 28/164 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------------HQGPIQ--- 77
++ V ATD D G FG V YR++ N A F +D +T P+
Sbjct: 686 IVAVVATDPDYGNFGQVSYRIVAGNE--AGIFRIDRSTGEIFVVRPDMLSVRTQPMHMLN 743
Query: 78 ----DEGGLSSTA--TVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADE 130
D G L S A V + + D + P F+ Y + V E G VG V A D
Sbjct: 744 ISATDGGNLRSNADAVVFLSIIDAMQRPPIFEKARYNYYVKEDIPRGTVVGSVIAASGDV 803
Query: 131 GQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYE-KQQLYL 170
+ V YS+ P F ++ N+G+IR K LD+E K Q+ L
Sbjct: 804 AHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLL 847
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+S A + I + D ND +P+F + +V EG + G V +VHA D+D G NA + Y +
Sbjct: 2249 LASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVSQVHAFDSDAGSNARLRYHI 2308
Query: 141 PE---DIPFVVD-ANTGDIRTNKALDYEKQQLYLERVF 174
+ D FV++ A +G +RTN LD E + +Y ++
Sbjct: 2309 VDGNHDNAFVIEPAFSGIVRTNIVLDREIRDIYKLKII 2346
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 71/166 (42%), Gaps = 25/166 (15%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY--------------RLLDNNTDA 60
D FY + +G +++V A+D D G +V Y R
Sbjct: 559 DQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEICI 618
Query: 61 ASYFNLDPATEHQGPI--QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
A + + + ++ P+ D GGLS+TA + +++TD+ND P F Y+ S+ E
Sbjct: 619 AGELDFERRSSYEFPVLATDRGGLSTTAMIKMQLTDVNDNRPVFYPREYKVSLRESPKAS 678
Query: 119 A------VGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
+ + V ATD D G V Y + E F +D +TG+I
Sbjct: 679 SQASSTPIVAVVATDPDYGNFGQVSYRIVAGNEAGIFRIDRSTGEI 724
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 83/195 (42%), Gaps = 51/195 (26%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
S + G++ D LG +++Q+ A D D G V RL+ ++L T+ Q
Sbjct: 1902 SKYTGSVQEDA-PLGTSVVQISAVDADLG----VNARLV---------YSLANETQWQFA 1947
Query: 76 IQDEGGL------------------------------SSTATVNIRVTDINDKNPEFQSL 105
I + GL S+T V I V DIND P F+
Sbjct: 1948 IDGQSGLITTVGKLDRELQASYNFMVLATDGGRYEVRSATVPVQINVLDINDNRPIFERY 2007
Query: 106 PYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPED-----IPFVVDANTGDIRTNK 159
PY VP Q G + +V A DAD G NA + YS+ + F ++ +TG + ++
Sbjct: 2008 PYIGQVPALIQPGQTLLKVQAIDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSASQ 2067
Query: 160 ALDYEKQQ-LYLERV 173
+L E + L+LE V
Sbjct: 2068 SLASESGKLLHLEVV 2082
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L ++ ++ +R+TD+ND PEF+ Y +V E D G +V +V A D DEG N+ + YS+
Sbjct: 431 LHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAHDRDEGLNSALTYSL 490
Query: 141 PEDIP------FVVDANTGDIRTNKALDYEKQ 166
E P F +D TG I T +D E +
Sbjct: 491 AE-TPETHAQWFQIDPQTGLITTRSHIDCETE 521
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 86 ATVNIRVTDINDKNPEFQ-SLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
AT+ I V D+ND +PEF+ Y S+PE + + V A+D DEG NA + YS+
Sbjct: 1778 ATIYITVGDVNDNSPEFRPGSCYGLSIPENSEPGVIHTVVASDLDEGPNADLIYSITGGN 1837
Query: 143 -DIPFVVDANTGDIRTNKALDYEKQQLY 169
F +D+++G++ + + LD E+ Y
Sbjct: 1838 LGNKFSIDSSSGEL-SARPLDREQHSRY 1864
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 22/145 (15%)
Query: 18 FYGAMAR----DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN------TDAAS----- 62
F +M R + ELG L A DKDSG G V Y L+ + DA S
Sbjct: 878 FEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKESGKGLFAIDARSGHLIL 937
Query: 63 --YFNLDPATEHQGPIQDEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ + + + H + G LS+ T+ + V D+ND P F+ Y +V E +
Sbjct: 938 SQHLDYESSQRHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRS 997
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV 140
+ +V+A+D D G NA + Y +
Sbjct: 998 INAQIIQVNASDLDTGNNARITYRI 1022
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 60/150 (40%), Gaps = 25/150 (16%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLD----PATEHQGPIQDEGGLSSTATVNIRVT 93
A D D LV RLLD + S F L+ T P SS TV I V
Sbjct: 1372 AFDIDRHSGNLVVARLLDR--EVQSEFRLEIRALDTTASNNP------QSSAITVKIEVA 1423
Query: 94 DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------- 145
D+ND PE+ P + V E G + ATDAD G N + Y + P
Sbjct: 1424 DVNDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQE 1483
Query: 146 -----FVVDANTGDIRTNKALDYEKQQLYL 170
F +D+ TG + LD+E Q YL
Sbjct: 1484 QAMSLFSMDSLTGALSLQAPLDFEAVQEYL 1513
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 19/101 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------- 71
Y A + +G +++QV A+D D+ + GLVEY + +D F +DP T
Sbjct: 238 YFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAIYINKA 297
Query: 72 --------HQGPI----QDEGGLSSTATVNIRVTDINDKNP 100
H+ + E L +TA V+IRVTD+ND P
Sbjct: 298 LDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQP 338
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 25/157 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--FNLDPAT---------------- 70
+G ++ + A+D D G FG + Y + +D +S+ F +D +
Sbjct: 2824 VGSSVFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFQVDSESGLVTSAFVFDYEQRQR 2883
Query: 71 -EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG---QDGLAVGRVHAT 126
+ + D GG ++ V + + ++ P+F Y F +P G VG+V AT
Sbjct: 2884 YDMELLASDMGGKKASVAVRVEIESRDEFTPQFTERTYRFVLPAAVALPQGYVVGQVTAT 2943
Query: 127 DADEGQNAVVYY--SVPEDIPFVVDANTGDIRTNKAL 161
D+D G + V Y S P F V+ ++G + + L
Sbjct: 2944 DSDSGPDGRVVYQLSAPHS-HFKVNRSSGAVLIKRKL 2979
Score = 42.4 bits (98), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 38/182 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
+ A + + G + QV A D D+G + Y ++D N D A F ++PA G ++
Sbjct: 2274 FVATVSEGNNKGTFVSQVHAFDSDAGSNARLRYHIVDGNHDNA--FVIEPA--FSGIVRT 2329
Query: 78 -------------------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEF-SVPEGQ 115
DEG ++ TAT+ +++ D+ND P F P +V E
Sbjct: 2330 NIVLDREIRDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTFP--PNNLVTVSEAT 2387
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE---DIP----FVVDANTGDIRTNKALDYEKQQ 167
+ G + + A D D A+ Y E DI F +D +G + + LDYE QQ
Sbjct: 2388 ELGAVITSISANDVDT-YPALTYRLGAESTVDIENMSIFALDRYSGKLVLKRRLDYELQQ 2446
Query: 168 LY 169
Y
Sbjct: 2447 EY 2448
Score = 42.4 bits (98), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI 144
+ I V D ND P F+ Y SV E G +V ++ A DAD G NA + YS+ +
Sbjct: 1883 CNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVVQISAVDADLGVNARLVYSLANET 1942
Query: 145 --PFVVDANTGDIRTNKALDYEKQQLY 169
F +D +G I T LD E Q Y
Sbjct: 1943 QWQFAIDGQSGLITTVGKLDRELQASY 1969
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 16/126 (12%)
Query: 54 LDNNTDAASYFNLDPA--TEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
LD ++ A SY + A + HQ P L S + + D ND P+F Y +
Sbjct: 2765 LDYDSGAKSYELIIRACDSHHQRP------LCSLQPFRLELHDENDNEPKFPLTEYVHFL 2818
Query: 112 PEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIP----FVVDANTGDIRTNKALDY 163
E + G +V R HA+D D+G + YS+ P D F VD+ +G + + DY
Sbjct: 2819 AENEPVGSSVFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFQVDSESGLVTSAFVFDY 2878
Query: 164 EKQQLY 169
E++Q Y
Sbjct: 2879 EQRQRY 2884
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 37/183 (20%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT---------EHQ 73
R++ G +++V+A D+D G+ + Y ++ ++D F++DP + +H+
Sbjct: 1214 REEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHE 1273
Query: 74 -------GPIQDEGGLSSTATVN---IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGR 122
G +GG TV + V D+ND P F S F V E G VG
Sbjct: 1274 ERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGS 1333
Query: 123 VHATD--ADEGQNAV--------VYYSVPE------DIPFVVDANTGDIRTNKALDYEKQ 166
+ + AD +N+V V Y++ + F +D ++G++ + LD E Q
Sbjct: 1334 ISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQ 1393
Query: 167 QLY 169
+
Sbjct: 1394 SEF 1396
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 67/172 (38%), Gaps = 39/172 (22%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLL-------DNNTDAASYFNLDPAT---EHQGPIQD 78
+G + ATD D+G G ++YRL+ ++ A S F++D T Q P+
Sbjct: 1447 VGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMSLFSMDSLTGALSLQAPLDF 1506
Query: 79 EG-------------------GLSSTATVNIRVTDINDKNPEFQS-------LPYEFSVP 112
E L ++ TV +R+ D ND P F S F
Sbjct: 1507 EAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGGKTASLFISD 1566
Query: 113 EGQDGLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKAL 161
+ G V + A D D G N + Y + + F +++ TG I K+L
Sbjct: 1567 ATRIGEVVAHIVAVDEDSGDNGQLTYEITGGNGEGRFRINSQTGIIELVKSL 1618
>gi|410900464|ref|XP_003963716.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-23-like [Takifugu rubripes]
Length = 3370
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 80/165 (48%), Gaps = 30/165 (18%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGPI----QDEG 80
+LG T+++V ATD DSG+F +EY L+ D F + P+T P+ +D
Sbjct: 2421 DLGTTIVRVSATDADSGRFAAIEYSLV----DGEGKFAIKPSTGEIYILSPLDRETKDHY 2476
Query: 81 GLSSTATVN----------------IRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRV 123
L++ A N + V D+ND P F Y SV E + G +V V
Sbjct: 2477 TLTAVARDNPGSSPNNRRENSVQVLVTVLDVNDYRPRFTERVYNTSVFENEPSGTSVITV 2536
Query: 124 HATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQ 166
ATD DEG+N V YS+ P F++D NTG +R+ + L +Q
Sbjct: 2537 RATDLDEGENGAVLYSMLGPHSEAFILDPNTGLVRSRRLLQSSEQ 2581
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 79/168 (47%), Gaps = 26/168 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE--HQGPI----------- 76
G +++QV+ATD D G+ G V YR+L N++ + F++D T +GP
Sbjct: 1123 GTSILQVQATDADQGENGRVLYRILTGNSN--NLFSIDRQTGLVSRGPRPLDRETSNSHV 1180
Query: 77 -------QDEGGLSSTATVNIRVTDINDKNPEFQSLPY-EFSVPEGQD-GLAVGRVHATD 127
DEG + S+ V I V D ND+ P F Y + E G +V V ATD
Sbjct: 1181 LEVEAYNSDEGNMRSSVRVIIYVNDANDEVPVFTQQQYNRLGLRETAGIGTSVIVVRATD 1240
Query: 128 ADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
D G V Y+V D F VD +TG + T LDYE + YL V
Sbjct: 1241 PDTGDGGAVAYAVVSGSDRKFEVDVSTGLVTTVDYLDYETKTTYLMNV 1288
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 35/169 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-------------------------LDNNTDAASYF 64
G + ++A+D+DSG G VEY + LD T A ++
Sbjct: 1765 GPRVWTLRASDEDSGLNGKVEYSITGGDHQNEFMISPVEGELRVRKDVELDRETTA--FY 1822
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRV 123
N+ G +S+ V + V DIND +P +LP+ SV EG +V RV
Sbjct: 1823 NITVTARDLG----TPSRNSSVVVGVHVRDINDNDPVLLNLPHNTSVREGAPIHTSVARV 1878
Query: 124 HATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
A DAD G+NA++ Y++ D F ++ +G ++ N+ LD E+ Y
Sbjct: 1879 QAEDADSGRNALLTYNITAGNLDGAFYINDTSGVVQVNRPLDRERVAEY 1927
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 73/165 (44%), Gaps = 30/165 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL-DPATEHQGPI------------ 76
G TL+ V A D D G G V Y+LL + Y L DP+T G I
Sbjct: 2317 GTTLLSVSAVDPDKGPNGQVIYQLL--HLPRGGYVRLEDPST---GKIIANQTVDFEQVQ 2371
Query: 77 --------QDEGGLSSTAT--VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHA 125
QD G A V +R+ D+ND NP F Y+ V E D G + RV A
Sbjct: 2372 WLNFTIRAQDHGSPPRIAELPVFLRIVDVNDNNPVFLQPSYQEPVFENVDLGTTIVRVSA 2431
Query: 126 TDADEGQNAVVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
TDAD G+ A + YS V + F + +TG+I LD E + Y
Sbjct: 2432 TDADSGRFAAIEYSLVDGEGKFAIKPSTGEIYILSPLDRETKDHY 2476
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 70/164 (42%), Gaps = 36/164 (21%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G +L+ + ATD D+G FG+V Y +D F+LD E G +
Sbjct: 480 GTSLLHILATDADAGTFGIVRYYF----SDEPDQFSLD---EETGWVILRASLDYELMRR 532
Query: 77 -------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDA 128
+D GG +T + + V D+ND P FQ Y S+ E + + V RV ATD
Sbjct: 533 FTLTVLAKDGGGEETTGRIRVNVLDVNDNGPLFQKEAYVGSLRENEQAVQPVARVRATDE 592
Query: 129 DEGQNAVVYYSVPEDIPF-------VVDANTGDIRTNKALDYEK 165
D N + Y+V F +VD I + LDYE+
Sbjct: 593 DSPPNNFLTYTVASASAFAGYFSIIMVDG-YAVISVTRPLDYEQ 635
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV-PEDI 144
TVNI++ D+ND P F PY +PE G ++ V+ATD D+G V +S P
Sbjct: 123 TVNIQIGDVNDNAPIFHGQPYTVHIPENTPVGRSIFMVNATDPDQGTGGSVLFSFQPPSS 182
Query: 145 PFVVDANTGDIRTNKALDYEKQQLY 169
F +D G + K LDYE Y
Sbjct: 183 FFTIDGARGTVTVTKPLDYETTSAY 207
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 78/168 (46%), Gaps = 32/168 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQ--------- 77
G +++ V+ATD D G+ G V Y +L +++A F LDP T + +Q
Sbjct: 2530 GTSVITVRATDLDEGENGAVLYSMLGPHSEA---FILDPNTGLVRSRRLLQSSEQFNLTV 2586
Query: 78 ---DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSV----PEGQDGLAVGRVHATDA 128
D+G L TA + I V D+ND P F P ++ E GL V VHATD+
Sbjct: 2587 VATDQGRPPLWGTADLIITVIDVNDNRPVFVR-PANGTIIHITEEQPPGLPVYEVHATDS 2645
Query: 129 DEGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYEKQQLY 169
DEG N V Y+ + F +D +G I T LD EK LY
Sbjct: 2646 DEGVNGEVRYAFLQTGASNRDWENFHIDPISGVITTTVKLDREKLALY 2693
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 27/160 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD------------PATEHQG--- 74
G ++++V ATD+D G ++ Y + N D F +D P E Q
Sbjct: 1549 GTSVLRVMATDRDIGPNAMLFYYITAGNQDLT--FRMDRMTGEMVTRPAPPDRERQQEYI 1606
Query: 75 ---PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD--GLAVGRVHATD 127
++D+G LSS T+ + + D ND PEF Y + EG D G + V A D
Sbjct: 1607 LNVTVEDDGTPPLSSPTTIYVHIVDENDNAPEFPEEEYVTVLSEGPDTVGATIATVTAID 1666
Query: 128 ADEGQNAVVYYSVPED---IPFVVDANTGDIRTNKALDYE 164
DEG N + Y++ + F +++ TG I K LD+E
Sbjct: 1667 PDEGLNGTLRYAITQGNLIQTFHINSITGRITAVKELDFE 1706
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVP 141
+++ TV + + D+ND +P+F +LP+ VPEG +G AV +V D D +N ++ ++
Sbjct: 876 TASTTVFVNLLDLNDNDPKFLNLPFVAEVPEGLLNGSAVFKVQVEDPDHDKNGLITMALQ 935
Query: 142 EDIP---FVVDANTGDIRTNKALDYEKQQLYLERVF 174
+P F ++ +TG + + LD E+ LY R+
Sbjct: 936 MGMPRLDFYLNTSTGVLTSTSVLDREQIGLYHLRII 971
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 69/159 (43%), Gaps = 28/159 (17%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT--------------EHQGP------ 75
V A D D G +V+Y+LL D F +DP T Q P
Sbjct: 1990 VLAKDNDIGPNAVVKYQLLGARVD---LFTVDPNTGVILVRPGSRLDREAFQEPRVELFL 2046
Query: 76 -IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQN 133
+D GGL+S+ + + + D ND P F Y +PE G+ V ++ ATDAD G N
Sbjct: 2047 VAEDIGGLNSSVPLTVAILDENDNPPVFSPSSYSVRLPENSPTGVVVTQLSATDADSGSN 2106
Query: 134 AVVYYSVPEDIP--FVVDANTGDIRT-NKALDYEKQQLY 169
+ Y + FVV+ +G + N +LD E + Y
Sbjct: 2107 GWLMYRLESGAQDRFVVEPLSGAVLVGNTSLDREDRGSY 2145
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 73/157 (46%), Gaps = 34/157 (21%)
Query: 30 GVTLMQVKATDKDSGK-FGLV----------EYRLLDNNTDAASYFNLDPATEHQ----- 73
G T++ V ATD D+ + FG ++RL + + + LD + +
Sbjct: 691 GATVLLVNATDLDASREFGQASLIYSLEGSSQFRLNSRSGEITTTALLDRELKSEYILIV 750
Query: 74 -------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV----PEGQDGLAVGR 122
GP Q G ATVNI + DIND P ++ PY +V P D ++V
Sbjct: 751 RAVDGGVGPQQKTG----IATVNITILDINDNAPVWRDEPYHANVVEMSPINTDVISVS- 805
Query: 123 VHATDADEGQNAVVYYSVPEDIPF-VVDANTGDIRTN 158
+ +D G+N V YS+ D PF ++++TG IRT+
Sbjct: 806 -FGSXSDNGENGTVVYSIRPDNPFYTINSSTGKIRTS 841
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 70/165 (42%), Gaps = 29/165 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNN-------------TDAASYFNLDPATEH--- 72
+G T+ V A D D G G + Y + N A + + + H
Sbjct: 1655 VGATIATVTAIDPDEGLNGTLRYAITQGNLIQTFHINSITGRITAVKELDFEISNGHYAL 1714
Query: 73 ------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYE--FSVPEGQDGLAVGRVH 124
Q P +D L+S+ TV + V D+ND P F YE F V EGQ G V +
Sbjct: 1715 VVTATDQCPNRDLR-LTSSTTVLVNVLDVNDVTPSFPRT-YEGPFEVTEGQPGPRVWTLR 1772
Query: 125 ATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQ 166
A+D D G N V YS+ F++ G++R K ++ +++
Sbjct: 1773 ASDEDSGLNGKVEYSITGGDHQNEFMISPVEGELRVRKDVELDRE 1817
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 78/177 (44%), Gaps = 30/177 (16%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------- 77
+K +G + V A D D+G GL+ + L+ N + F + G +
Sbjct: 1435 EKTPMGEKVAVVLARDIDAGLNGLINFTLVAGNME--DVFKIKTVNHTYGEVYVNAELDR 1492
Query: 78 ---DEGGLSSTATVN------------IRVTDINDKNPEFQSLP-YEFSVPEG-QDGLAV 120
D L AT N I + D+ND P +S Y S+ E G +V
Sbjct: 1493 ESVDRYLLKVRATDNGSPPRHTDHSLTINILDVNDNAPVIESQKGYNVSISENVGGGTSV 1552
Query: 121 GRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKA-LDYEKQQLYLERV 173
RV ATD D G NA+++Y + +D+ F +D TG++ T A D E+QQ Y+ V
Sbjct: 1553 LRVMATDRDIGPNAMLFYYITAGNQDLTFRMDRMTGEMVTRPAPPDRERQQEYILNV 1609
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 76/183 (41%), Gaps = 54/183 (29%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--FNLDP------------------- 68
G+ + +V ATD D G G V Y L + F++DP
Sbjct: 2634 GLPVYEVHATDSDEGVNGEVRYAFLQTGASNRDWENFHIDPISGVITTTVKLDREKLALY 2693
Query: 69 -----ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEF-----QSLPYE-FSVPE-GQD 116
A + P+ E +T + + + DI+D P F SLPY+ ++PE
Sbjct: 2694 SLIIVARDMGQPVPYE----TTQPLQVALLDIDDNEPVFLKPPRGSLPYQKMTIPEHSPP 2749
Query: 117 GLAVGRV-HATDADEGQNAVVYYSVPEDIPFVVDANT---------GDIRTNKALDYEKQ 166
G VG V A DADEG NAVVYY F+ N+ G+++ + LD E+
Sbjct: 2750 GTMVGNVTRAVDADEGSNAVVYY-------FIAGGNSDGNFGLSLDGELKLYRDLDREEI 2802
Query: 167 QLY 169
+Y
Sbjct: 2803 PVY 2805
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV- 140
+ TATV + V D+ND P F YE + E G ++ +V ATDAD+G+N V Y +
Sbjct: 1088 TGTATVFVEVQDVNDNRPIFLQNSYETGILESVPQGTSILQVQATDADQGENGRVLYRIL 1147
Query: 141 --PEDIPFVVDANTGDI-RTNKALDYEKQQLYLERV 173
+ F +D TG + R + LD E ++ V
Sbjct: 1148 TGNSNNLFSIDRQTGLVSRGPRPLDRETSNSHVLEV 1183
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--QDGLAVGRVHATDADEGQNAVVYYSV 140
+ST+T+ ++V D+ND+ P F Y S+ E +D + V R+ +D D G NA + Y +
Sbjct: 981 TSTSTLTVKVLDVNDETPTFNPRLYNVSLKESVPRDHI-VSRLACSDNDAGLNAELSYFI 1039
Query: 141 P---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+D F V G +RT LD E Q Y
Sbjct: 1040 TGGNQDGKFSVGFRDGIVRTVVRLDRETQAAY 1071
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 78/193 (40%), Gaps = 31/193 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-LDPATEHQG 74
+L + R+ + ++ +V+A D DSG+ L+ Y + N D A Y N +
Sbjct: 1858 NLPHNTSVREGAPIHTSVARVQAEDADSGRNALLTYNITAGNLDGAFYINDTSGVVQVNR 1917
Query: 75 PIQDEGGLSSTATVNIR-------------------VTDINDKNPEFQSLPYEFSVPEGQ 115
P+ E T+ ++ + D ND P F Y + E
Sbjct: 1918 PLDRERVAEYRLTITVKDNPENSRIARRDSDLLVIAILDENDNRPVFTRTTYRAEIMENS 1977
Query: 116 ---DGLAV--GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI--RTNKALDYEK 165
+ + V G V A D D G NAVV Y + D+ F VD NTG I R LD E
Sbjct: 1978 LAGNTVTVLNGPVLAKDNDIGPNAVVKYQLLGARVDL-FTVDPNTGVILVRPGSRLDREA 2036
Query: 166 QQLYLERVFLISK 178
Q +FL+++
Sbjct: 2037 FQEPRVELFLVAE 2049
Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 72/172 (41%), Gaps = 36/172 (20%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG----------PIQDEGGLSST 85
++A DKD G + + L NN++ YF L P T QG P+ E S +
Sbjct: 377 IQAEDKDEGVNSMFQVFLTGNNSE---YFTLSP-TAVQGRADIRMRVAMPLDYEHIRSYS 432
Query: 86 ---------------ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
A V I + + ND P F Y S+PE G ++ + ATDAD
Sbjct: 433 FSLYANESMSDHVGFARVFIELINENDNRPIFSKPLYNISLPENTAPGTSLLHILATDAD 492
Query: 130 EGQNAVV-YYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
G +V YY E F +D TG + +LDYE L R F ++ A
Sbjct: 493 AGTFGIVRYYFSDEPDQFSLDEETGWVILRASLDYE-----LMRRFTLTVLA 539
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 76/179 (42%), Gaps = 28/179 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL------------ 66
Y R+ + + +V+ATD+DS + Y + + A YF++
Sbjct: 570 YVGSLRENEQAVQPVARVRATDEDSPPNNFLTYTVASASA-FAGYFSIIMVDGYAVISVT 628
Query: 67 DPATEHQGP--------IQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
P Q P + +GG L+ST + + V D ND PEF Y + E
Sbjct: 629 RPLDYEQVPNGMIHLTVMAKDGGIPALNSTVPITVEVIDENDNPPEFSKSSYIVKILENI 688
Query: 116 D-GLAVGRVHATDADEGQ---NAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ G V V+ATD D + A + YS+ F +++ +G+I T LD E + Y+
Sbjct: 689 NAGATVLLVNATDLDASREFGQASLIYSLEGSSQFRLNSRSGEITTTALLDRELKSEYI 747
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 14/103 (13%)
Query: 76 IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFS-----VPEG-QDGLAVGRVHATDAD 129
+ D+ G A + I V D+ND P F+ P+ S + EG Q G + V A D D
Sbjct: 2272 VIDKSGSVPNARLTINVLDVNDNAPRFR--PFGVSNFTEKILEGAQPGTTLLSVSAVDPD 2329
Query: 130 EGQNAVVYYSVPEDIP-----FVVDANTGDIRTNKALDYEKQQ 167
+G N V Y + +P + D +TG I N+ +D+E+ Q
Sbjct: 2330 KGPNGQVIYQLLH-LPRGGYVRLEDPSTGKIIANQTVDFEQVQ 2371
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 52/124 (41%), Gaps = 28/124 (22%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-----------------LDNNT-----DAASYFNLD 67
GV + Q+ ATD DSG G + YRL L NT D SY +
Sbjct: 2090 GVVVTQLSATDADSGSNGWLMYRLESGAQDRFVVEPLSGAVLVGNTSLDREDRGSYRLVV 2149
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
AT+ P +S TAT+ + + D+ND P F +V E G+ V + A
Sbjct: 2150 TATDRGTP-----PMSGTATLTVILDDVNDSRPRFIEPVTMINVNESTPPGVVVATLTAE 2204
Query: 127 DADE 130
D D+
Sbjct: 2205 DPDQ 2208
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 28/161 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA---------------TEHQ 73
+G ++ V ATD D G G V + +S+F +D A + +Q
Sbjct: 153 VGRSIFMVNATDPDQGTGGSVLFSF----QPPSSFFTIDGARGTVTVTKPLDYETTSAYQ 208
Query: 74 GPI----QDE-GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+ QD+ LS A + I +TD+ D +P F +LPY ++ E G V ++ A D
Sbjct: 209 LTVNATDQDKLRPLSRLANLAISITDVQDMDPIFTNLPYSTNIEEDVPLGYEVRKITAID 268
Query: 128 ADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEK 165
D G+ + Y++ + F +D +G + + LD E
Sbjct: 269 QDLGRPRGIGYTIVSGNTNSVFALDYISGSLTVSGQLDREN 309
Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 69/174 (39%), Gaps = 35/174 (20%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRL----------------------LDNNTDAA 61
R+ +G +++ V+ATD D+G G V Y + LD T
Sbjct: 1224 RETAGIGTSVIVVRATDPDTGDGGAVAYAVVSGSDRKFEVDVSTGLVTTVDYLDYETKTT 1283
Query: 62 SYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAV 120
N+ AT+ P TV + + + D+ F S YE S+ E G+ V
Sbjct: 1284 YLMNVS-ATDQAPPFH-----QGFCTVYVTLLNELDEAVAFFSAGYEASLRENIATGMEV 1337
Query: 121 GRVHATDADEGQNAVVYYSVPEDIP-----FVVDANTGDIRTNKALDYEKQQLY 169
+V A AD N + Y P+ P F +D+ TG I LD EK LY
Sbjct: 1338 VQVQAQSAD-NLNQLTYRFDPDTSPAALALFKIDSVTGRITVTGLLDREKGDLY 1390
>gi|344272208|ref|XP_003407927.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-10-like [Loxodonta
africana]
Length = 788
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 85/186 (45%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 164 IYTATVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 222
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T TVNI +TD+ND P F V E
Sbjct: 223 PNMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHLRVLESS 282
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
A+G V ATDAD G+NA V Y + + DI D G I K LDYE ++
Sbjct: 283 PVXTAIGNVKATDADTGKNAEVEYRIIDGDGTDMFDIITEKDTQEGIITVKKPLDYESRR 342
Query: 168 LYLERV 173
LY +V
Sbjct: 343 LYTLKV 348
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKIHDINDNEPTFPEEIYTATVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|351698157|gb|EHB01076.1| Cadherin EGF LAG seven-pass G-type receptor 3 [Heterocephalus
glaber]
Length = 3767
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 85/176 (48%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGP 75
Y A R+ +++V ATD+D GLV Y ++ N+ +F +D T + P
Sbjct: 441 YVAQVREDVHPHTVVLRVTATDRDKDANGLVHYNIISGNSHG--HFAIDSLTGEIQVVAP 498
Query: 76 I--------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ QD G ++T +I+V DIND P F S P++ SV E G
Sbjct: 499 LDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLENAPLG 558
Query: 118 LAVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+V + A DAD G+NA + YS V D PFV+++ TG + + +LD E + Y
Sbjct: 559 HSVIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATGWVSVSGSLDRESVEHYF 614
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQG 74
+++Q+ ATD+D+ G V+Y N D F ++P + E
Sbjct: 870 SVLQISATDRDAHANGRVQY-TFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTA 928
Query: 75 PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G L + ++ + V D+ND P F + +E V E G V ++ A D DEG
Sbjct: 929 YAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDEG 988
Query: 132 QNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE Q YL
Sbjct: 989 PNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEACQEYL 1030
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 32/185 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPAT----- 70
Y R+ E G ++Q++ATD D+ + YR + T AA+ F +DP +
Sbjct: 329 YRETLRENVEEGYPILQLRATDGDAPPNANLHYRFVGPPAARTAAAAAFEIDPRSGLIST 388
Query: 71 ------EH------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH QG ++ G S+T V+I V D ND P+F Y V
Sbjct: 389 SGRVDREHMESYELVVEASDQG--KEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVR 446
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E V RV ATD D+ N +V+Y++ F +D+ TG+I+ LD+E ++
Sbjct: 447 EDVHPHTVVLRVTATDRDKDANGLVHYNIISGNSHGHFAIDSLTGEIQVVAPLDFEAERE 506
Query: 169 YLERV 173
Y R+
Sbjct: 507 YALRI 511
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V+I +TD N P FQS Y S+ E + G V + A+D D G+NA + Y + +++P
Sbjct: 735 VHINITDANTHRPVFQSAHYSVSMNEDRPVGSTVVVISASDDDVGENARITYLLEDNLPQ 794
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DA++G I LDYE Q Y
Sbjct: 795 FRIDADSGAITLQAPLDYEDQVTY 818
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 35/183 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPATEHQGPI- 76
Y + + G +++V A D DSG+ G + Y L N+ + F++DP H G I
Sbjct: 221 YQTLVPENEAAGTAVLRVVAQDPDSGEAGRLVYSLAALMNSRSLELFSIDP---HSGLIR 277
Query: 77 -------------------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG- 114
QD G LS+T V + V D ND +P F+ Y ++ E
Sbjct: 278 TAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRENV 337
Query: 115 QDGLAVGRVHATDADEGQNAVVYY--------SVPEDIPFVVDANTGDIRTNKALDYEKQ 166
++G + ++ ATD D NA ++Y F +D +G I T+ +D E
Sbjct: 338 EEGYPILQLRATDGDAPPNANLHYRFVGPPAARTAAAAAFEIDPRSGLISTSGRVDREHM 397
Query: 167 QLY 169
+ Y
Sbjct: 398 ESY 400
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEH 72
S Y + +G T++ + A+D D G+ + Y L DN F +D A
Sbjct: 751 SAHYSVSMNEDRPVGSTVVVISASDDDVGENARITYLLEDN----LPQFRIDADSGAITL 806
Query: 73 QGPIQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQD 116
Q P+ E ++ T + R V D+ND P+F + Y V E
Sbjct: 807 QAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAP 866
Query: 117 GL-AVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ++ ATD D N V Y+ D F ++ +G +RT + LD E +Y
Sbjct: 867 PFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVY 924
Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 72/181 (39%), Gaps = 38/181 (20%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL-----------------------LDNNTDAASYFN 65
LG +++ ++A D D G+ +EY L LD + +F
Sbjct: 557 LGHSVIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATGWVSVSGSLDRESVEHYFFG 616
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
++ A +H P+ LS++A+V + V D+ND PEF Y + E G +V V
Sbjct: 617 VE-ARDHGSPL-----LSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGTSVVSVT 670
Query: 125 ATDADEGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKF 179
A D D N+ + Y + G + LDY KQ+ Y + V S
Sbjct: 671 AVDRDA--NSAISYQITGGNTRNRFAISTQGGVGLVTLALPLDY-KQERYFKLVLTASDR 727
Query: 180 A 180
A
Sbjct: 728 A 728
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 99 NPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDAN 151
+P+F Y+ VPE + G AV RV A D D G+ + YS+ + F +D +
Sbjct: 213 HPKFPQYNYQTLVPENEAAGTAVLRVVAQDPDSGEAGRLVYSLAALMNSRSLELFSIDPH 272
Query: 152 TGDIRTNKALDYEKQQLYLERV 173
+G IRT ALD E + + RV
Sbjct: 273 SGLIRTAAALDRESMERHYLRV 294
Score = 35.8 bits (81), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 68/161 (42%), Gaps = 28/161 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLD--PATEHQGP 75
+G + Q+ A D D G + Y++++ N + + +LD E+
Sbjct: 973 VGSVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEACQEYLIV 1032
Query: 76 IQDEGG-LSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRVHA 125
+Q L S ATV++R+ D ND +P + F + P G +GR+ A
Sbjct: 1033 VQATSAPLVSRATVHVRLIDQNDNSPVLNNFQILFNNYVSNHSDTFPSG----IIGRIPA 1088
Query: 126 TDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
D D + + ++ VV+ +G++R ++ LD +
Sbjct: 1089 YDPDVSDHLFYSFERGNELQLLVVNQTSGELRLSRKLDNNR 1129
>gi|410951053|ref|XP_003982216.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 [Felis
catus]
Length = 3316
Score = 72.8 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 86/176 (48%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQ--GP 75
Y A R+ +++V ATD+D GLV Y ++ N+ +F +D T E Q P
Sbjct: 550 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRG--HFAIDSLTGEIQVVAP 607
Query: 76 I--------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ QD G ++T +I+V DIND P F S P++ SV E G
Sbjct: 608 LDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLENAPLG 667
Query: 118 LAVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+V + A DAD G+NA + YS V D+PFV+++ TG + + LD E + Y
Sbjct: 668 HSVIHIQAVDADHGENARLEYSLTGVAPDMPFVINSATGWVSVSGPLDRESVEHYF 723
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQG 74
+++Q+ ATD+D+ G V+Y N D F ++P + E
Sbjct: 979 SVLQISATDRDAHANGRVQYTF-QNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTA 1037
Query: 75 PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G L + ++ + V D+ND P F + +E V E G V ++ A D DEG
Sbjct: 1038 YAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDEG 1097
Query: 132 QNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE +Q Y+
Sbjct: 1098 PNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYV 1139
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 32/185 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL---DNNTDAASYFNLDPAT----- 70
Y R+ E G ++Q++ATD D+ + YR + AA+ F +DP +
Sbjct: 438 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLIST 497
Query: 71 ------EH------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH QG Q+ G S+T V+I V D ND P+F Y V
Sbjct: 498 SGRVDREHMESYELVVEASDQG--QEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVR 555
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E + V RV ATD D+ N +V+Y++ F +D+ TG+I+ LD+E ++
Sbjct: 556 EDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVVAPLDFEAERE 615
Query: 169 YLERV 173
Y R+
Sbjct: 616 YALRI 620
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V+I +TD N P FQS Y SV E + G V + A+D D G+NA + Y + +++P
Sbjct: 844 VHINITDANTHRPVFQSAHYSVSVNEDRPVGSTVVVISASDDDVGENARITYLLEDNLPQ 903
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DA++G I LDYE Q Y
Sbjct: 904 FRIDADSGAITLQAPLDYEDQVTY 927
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 29/180 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDP--------- 68
Y A+ + G +++V A D D+G+ G + Y L N+ + F++DP
Sbjct: 330 YQALVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPLSGLIRTEA 389
Query: 69 ATEHQG--------PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
A + + QD G LS+T V + VTD ND P F+ Y ++ E ++G
Sbjct: 390 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVTDRNDHAPVFEQAQYRETLRENVEEG 449
Query: 118 LAVGRVHATDADEGQNAVVYY--------SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ ++ ATD D NA + Y F +D +G I T+ +D E + Y
Sbjct: 450 YPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESY 509
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEH 72
S Y + +G T++ + A+D D G+ + Y L DN F +D A
Sbjct: 860 SAHYSVSVNEDRPVGSTVVVISASDDDVGENARITYLLEDN----LPQFRIDADSGAITL 915
Query: 73 QGPIQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQD 116
Q P+ E ++ T + R V D+ND P+F + Y V E
Sbjct: 916 QAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAP 975
Query: 117 GL-AVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ++ ATD D N V Y+ D F ++ +G +RT + LD E +Y
Sbjct: 976 PFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVY 1033
Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 56/115 (48%), Gaps = 12/115 (10%)
Query: 71 EHQGP----IQDEGGLSSTATVN-IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVH 124
+H GP I+ + G+ T + IR +++P+F Y+ VPE + G AV RV
Sbjct: 289 QHPGPRPPGIRAQSGIWRIPTASRIRPRRAANRHPQFPQYNYQALVPENEAAGTAVLRVV 348
Query: 125 ATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLERV 173
A D D G+ + YS+ + F +D +G IRT ALD E + + RV
Sbjct: 349 AQDPDAGEAGRLVYSLAALMNSRSLELFSIDPLSGLIRTEAALDRESMERHYLRV 403
Score = 42.0 bits (97), Expect = 0.10, Method: Composition-based stats.
Identities = 47/178 (26%), Positives = 69/178 (38%), Gaps = 32/178 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQDEG----- 80
LG +++ ++A D D G+ +EY L D F ++ AT GP+ E
Sbjct: 666 LGHSVIHIQAVDADHGENARLEYSLTGVAPDMP--FVINSATGWVSVSGPLDRESVEHYF 723
Query: 81 -----------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR--VHATD 127
LS++A+V + V D+ND PEF Y + E AVG V T
Sbjct: 724 FGVEARDHGTPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDA---AVGTTVVSVTA 780
Query: 128 ADEGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
D N+ + Y + G + LDY KQ+ Y + V S A
Sbjct: 781 VDRDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLDY-KQERYFKLVLTASDRA 837
Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 65/158 (41%), Gaps = 28/158 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPI- 76
+G + Q+ A D D G + Y++++ N + + +LD + I
Sbjct: 1082 VGSVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIV 1141
Query: 77 --QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRVHA 125
L S ATV++R+ D ND +P + F + P G +GR+ A
Sbjct: 1142 VQATSAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSG----VIGRIPA 1197
Query: 126 TDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALD 162
D D + + ++ VV+ +G++R ++ LD
Sbjct: 1198 YDPDVSDHLFYSFERGNELQLLVVNQTSGELRLSRKLD 1235
>gi|307210796|gb|EFN87178.1| Protocadherin-like wing polarity protein stan [Harpegnathos
saltator]
Length = 3166
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 85/176 (48%), Gaps = 29/176 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLDPATEHQGPIQD--------- 78
+GVT++ V ATD D GK + Y L D+ A + F+++ T G I
Sbjct: 822 VGVTVLVVSATDSDVGKNAQITYSLATDSGEQAVNEFSINSQT---GAITTTRALDRELV 878
Query: 79 ----------EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVH 124
+GG LS T V I VTD+ND P F++ Y+ S+PE G +V RV
Sbjct: 879 SSYLLTVTARDGGVPPLSDTTDVEISVTDVNDNAPVFEAPQYQGSIPEDVLVGTSVLRVA 938
Query: 125 ATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
ATDAD N V Y++ + D F +D TG +RT K+LD E Y + I +
Sbjct: 939 ATDADSDLNGRVKYALEDDGDGAFAIDPTTGIVRTAKSLDRESVARYSLKAVAIDR 994
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 85/189 (44%), Gaps = 41/189 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPATE 71
Y A R+ +G T++ VKATD+D+G+ VEY ++ +++ A+ F +DP
Sbjct: 371 YDASVREGVPVGSTVVTVKATDQDTGRNAEVEYSIVCTTAGGSTAHSEEAAIFRIDP--- 427
Query: 72 HQGPIQDEGGL-------------------------SSTATVNIRVTDINDKNPEFQSLP 106
G + L S+ AT+ +RV D ND P+F
Sbjct: 428 RSGVVTTRTALDREQTEVYTVLLSVTDQATPPSARRSANATLVVRVLDDNDNYPQFTERT 487
Query: 107 YEFSVPEGQDGLA---VGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKA 160
Y +V E D V R+ ATDAD G NA V Y++ F +D+ +GD+ K
Sbjct: 488 YSAAVLEDLDYTTNPIVARIRATDADAGSNAAVRYAIIGGNTQNTFSIDSMSGDVALVKP 547
Query: 161 LDYEKQQLY 169
LDYE + Y
Sbjct: 548 LDYESTRSY 556
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 80/171 (46%), Gaps = 27/171 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPI----Q 77
+ +++ATD D+G V Y ++ NT D A LD + I Q
Sbjct: 504 VARIRATDADAGSNAAVRYAIIGGNTQNTFSIDSMSGDVALVKPLDYESTRSYKIVIRAQ 563
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNA 134
D G S+T + + V D+ND P F + ++ SV E G +V RV A DADEG+NA
Sbjct: 564 DGGSPARSNTTQLLVMVRDVNDNAPRFYTSHFQESVSENVPLGYSVLRVQAYDADEGKNA 623
Query: 135 VVYYSV---------PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
++ Y++ E+ P V+ TG I T K LD E+ Y + F I
Sbjct: 624 LIRYTIGARDVTGAFTENFPITVNTETGWIYTTKQLDREQCSKYSKYQFTI 674
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 7/100 (7%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG + TA V + V+D N+ +P F++ PY SV E G+ V V ATD+D G+NA +
Sbjct: 783 DSGGRTDTALVYVNVSDANNFSPVFENAPYSVSVFEDAPVGVTVLVVSATDSDVGKNAQI 842
Query: 137 YYSVPEDI------PFVVDANTGDIRTNKALDYEKQQLYL 170
YS+ D F +++ TG I T +ALD E YL
Sbjct: 843 TYSLATDSGEQAVNEFSINSQTGAITTTRALDRELVSSYL 882
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 76/187 (40%), Gaps = 40/187 (21%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
Y A ++ E GV + V+A D ++G L+D + A LDP T G +
Sbjct: 265 LYVAAVEEEKEPGVYVTSVRARDPENGAVRYSMSSLIDARSQA--LLALDPIT---GRVT 319
Query: 78 DEGGL----------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
L + T T+ + V D ND P F+ Y+ SV EG
Sbjct: 320 TRARLDRENVDVHYFRVLAVDDSFPPRTGTTTLQVNVLDANDHAPSFEWPEYDASVREGV 379
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSV------------PEDIPFVVDANTGDIRTNKALD 162
G V V ATD D G+NA V YS+ E F +D +G + T ALD
Sbjct: 380 PVGSTVVTVKATDQDTGRNAEVEYSIVCTTAGGSTAHSEEAAIFRIDPRSGVVTTRTALD 439
Query: 163 YEKQQLY 169
E+ ++Y
Sbjct: 440 REQTEVY 446
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 78/172 (45%), Gaps = 30/172 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------E 71
+G ++++V ATD DS G V+Y L D+ A F +DP T
Sbjct: 930 VGTSVLRVAATDADSDLNGRVKYALEDDGDGA---FAIDPTTGIVRTAKSLDRESVARYS 986
Query: 72 HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+ D G LSS + I++ DIND P F++ + E G VG + A D
Sbjct: 987 LKAVAIDRGSPALSSVVPMIIKIEDINDSPPAFENDKIVLYIAENSPVGSTVGEIFAHDP 1046
Query: 129 DEGQNAVVYYSV---PEDIPFVVD----ANTGDIRTNKALDYEKQQLYLERV 173
DEG NAVV YS+ + F ++ A+ ++ T + LDYE + E V
Sbjct: 1047 DEGPNAVVQYSIIGGEDSNSFALNIRQGADRAELITLEELDYESPKKKFELV 1098
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 34/174 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL--------------LDNNTDAASYFN--------L 66
LG ++++V+A D D GK L+ Y + + NT+ +
Sbjct: 605 LGYSVLRVQAYDADEGKNALIRYTIGARDVTGAFTENFPITVNTETGWIYTTKQLDREQC 664
Query: 67 DPATEHQGPI----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVG 121
+++Q I E S +ATV + VTD+ND +P F+ YE V E G V
Sbjct: 665 SKYSKYQFTIIAADSGEEAKSMSATVILTVTDVNDNDPYFEPKNYEAVVSEDDPPGTPVT 724
Query: 122 RVHATDADEGQNAVVYYSVPED-----IPFVVDANTGDIRTNKALDYEKQQLYL 170
V ATD DE +A ++Y + G I + LDY++++ ++
Sbjct: 725 SVTATDPDE--DARIHYEITGGNTRGRFSIASQNGRGLITVAQPLDYKQEKRFV 776
>gi|363733446|ref|XP_420617.3| PREDICTED: protocadherin Fat 4 [Gallus gallus]
Length = 5019
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 23/161 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F++DP + E +
Sbjct: 1790 GSKIMQLTAMDADEGANALVTYTIISGADDS---FHVDPESGDLIATKRLDRERRSKYSL 1846
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQ 132
D+G SS +NI V+D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1847 LVRADDGLQSSDMRINITVSDVNDHIPKFSKPVYSFDIPEDATPGSLVAAILATDDDSGI 1906
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYL 170
N + Y+V ED F ++ TG +ALDYE QQ Y+
Sbjct: 1907 NGEITYTVSEDDEEGMFFLNPVTGVFNLTRALDYEAQQYYI 1947
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 79/166 (47%), Gaps = 22/166 (13%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------E 71
+ H +G + V A D+D+ GL+ Y + N N T +
Sbjct: 3134 ESHSVGAVIRTVSARDRDAAMNGLIRYNISSGNEAGNFAINTTTGTLTLAKPLDFELCQK 3193
Query: 72 HQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
H+ + D G +S T +V I V D+ND +P F Y +V E G V R++A+
Sbjct: 3194 HELIVTATDGGWVSRTGFCSVTINVIDVNDNSPTFSPEDYFPNVLENAPSGTTVIRLNAS 3253
Query: 127 DADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
DAD G NAV+ Y++ D+ FV+D NTG I T LDYE +Q Y
Sbjct: 3254 DADSGPNAVIAYAIQSSDSDL-FVIDPNTGTITTQGFLDYETKQSY 3298
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 79/165 (47%), Gaps = 30/165 (18%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LD-----------PAT 70
L+ V A D+DSG G + Y +++ NT+ + N LD A+
Sbjct: 2721 LLTVAAVDRDSGLNGQLIYEIIEGNTENSFSINRATGEIRSVRPLDREKLSRYTLTIKAS 2780
Query: 71 EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
+ P+Q S+T V I V D ND P F + + SVPE G V RV +D D
Sbjct: 2781 DKGTPLQ-----STTVKVIINVLDENDNAPRFSQI-FSASVPENAPLGFTVTRVTTSDED 2834
Query: 130 EGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
G NA+ YS+ + +PFV++ +TGDI ++ L+ E Y RV
Sbjct: 2835 IGMNAISRYSIRDTSLPFVINPSTGDITVSRLLNREDTDRYRIRV 2879
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 75/178 (42%), Gaps = 38/178 (21%)
Query: 30 GVTLMQVKATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP---IQDEGGLSS 84
G L+ ATD DSG G+ YR++ N + N+ +G + +GGL
Sbjct: 136 GRQLILDTATDADSGTNGVDHSSYRIVSGNEEGRFRLNITLNPSGEGAFLHLVSQGGLDR 195
Query: 85 TAT----------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
AT VN+ V DIND P F Y+ VPE G +V
Sbjct: 196 EATPSYQLLVQVEDKGEPRRRGYLQVNVTVQDINDNPPVFSQTLYQARVPEDAPVGASVL 255
Query: 122 RVHATDADEGQNAVVYYSV----------PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V A DADEG NA + Y + +PF VD +G IR + LDYE Q Y
Sbjct: 256 QVAAADADEGTNADIRYRLEGGDGGGGEGASSLPFEVDPESGVIRIRERLDYELCQQY 313
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 76/160 (47%), Gaps = 25/160 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------EHQGP------IQ 77
+++V A+D D G GL+ Y ++ N + F +D +T +H+ IQ
Sbjct: 1263 VLRVSASDVDEGTNGLIHYSVIKGNEEKQ--FAIDSSTGQVTLVGKLDHEATASYSLVIQ 1320
Query: 78 --DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D G LSST T++I V D ND +P F V E G V V ATD+D G
Sbjct: 1321 AVDSGAVSLSSTCTLSIDVLDENDNSPSFPKSTLSVDVLENMRVGELVSSVTATDSDSGD 1380
Query: 133 NAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
NA ++YS+ F + NTG I K LD+E Q LY
Sbjct: 1381 NADLHYSITGTNNHGTFSISPNTGSIFLAKKLDFETQSLY 1420
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 85/172 (49%), Gaps = 30/172 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGP---- 75
G L+QV ATD D G G V Y ++ D + F +D P + P
Sbjct: 2204 GTDLIQVLATDGDEGTNGQVRYSIVSG--DTGNQFRIDSVTGVITVAKPLDREKKPSYML 2261
Query: 76 -IQDEGGLSS----TATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDA 128
+Q SS T TVNI + D+ND P F+ PY +VPE + L + +V A D
Sbjct: 2262 SVQSSDRGSSPRTDTTTVNIVLKDVNDYVPTFELSPYNVNVPENLETLPKVILQVVARDD 2321
Query: 129 DEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D+G N+ + Y S E+ F++ A +G++R ++LD E+++ Y V LI+
Sbjct: 2322 DQGLNSKLTYVLVSGNEEGAFILSA-SGELRLVQSLDRERKEQY---VLLIT 2369
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 84/188 (44%), Gaps = 23/188 (12%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF---NLDPAT 70
D L Y + + +V ATDKDSG G + Y +++ N DA F L +
Sbjct: 1031 DQLSYEITILESEPVNSRFFKVHATDKDSGVNGEIAYSIIEGNAGDAFGIFPDGQLYIKS 1090
Query: 71 EHQGPIQ----------DEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQDGL 118
E +Q D ATVNI V D+ND P F S Y F E Q G
Sbjct: 1091 ELDRELQERYILLVVASDRAVEPLNATVNITVILEDVNDNRPLFNSTNYVFYFEEEQSGG 1150
Query: 119 A-VGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLER---V 173
+ VG+++A D D G N V YS P F ++ TG+IR+ D ++ L +R V
Sbjct: 1151 SYVGKINAVDKDFGPNGEVRYSFEHMQPDFELNTITGEIRSTHQFD--REALMRQRGAAV 1208
Query: 174 FLISKFAT 181
F ++ AT
Sbjct: 1209 FSLTVIAT 1216
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 69/161 (42%), Gaps = 20/161 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEG------------ 80
+ + +ATD DSG +EY LL + S +D G + E
Sbjct: 2103 VFKAQATDPDSGPNSYIEYSLLRPLGNKFSIGTIDGEVRLIGELDREAVSNYTLTVVATD 2162
Query: 81 ----GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
LSS+ V + V DIND NP F Y + E G + +V ATD DEG N
Sbjct: 2163 KGQPSLSSSTDVVVIVLDINDNNPLFAQKLYRVELEENTLTGTDLIQVLATDGDEGTNGQ 2222
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V YS+ F +D+ TG I K LD EK+ Y+ V
Sbjct: 2223 VRYSIVSGDTGNQFRIDSVTGVITVAKPLDREKKPSYMLSV 2263
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 73/170 (42%), Gaps = 28/170 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
S + A + LG T+ +V +D+D G + Y + D + F ++P+T G
Sbjct: 2808 SQIFSASVPENAPLGFTVTRVTTSDEDIGMNAISRYSIRDTSLP----FVINPST---GD 2860
Query: 76 IQ-------------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
I + G + + V + VTD+ND P F Y PE
Sbjct: 2861 ITVSRLLNREDTDRYRIRVSAHDSGWTVSTDVTVFVTDVNDNAPRFTKPSYYLECPELPG 2920
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYE 164
GL V +V ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 2921 IGLKVTQVSATDPDEGSNGHVFYFIKSQSEFFRINATTGEIFNKQYLRYQ 2970
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 61/117 (52%), Gaps = 13/117 (11%)
Query: 60 AASYFNLDPATEHQG---PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
A+ F+L QG P++D+ ATV I + DIND P+F Y+ ++ E
Sbjct: 1205 GAAVFSLTVIATDQGLPKPLKDQ------ATVQIYMKDINDNAPKFLKDLYQATISELAA 1258
Query: 117 GLA-VGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
L V RV A+D DEG N +++YSV E+ F +D++TG + LD+E Y
Sbjct: 1259 NLTQVLRVSASDVDEGTNGLIHYSVIKGNEEKQFAIDSSTGQVTLVGKLDHEATASY 1315
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 75/164 (45%), Gaps = 32/164 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++++ A+D DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3244 GTTVIRLNASDADSGPNAVIAYAIQSSDSD---LFVIDPNT---GTITTQGFLDYETKQS 3297
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHAT 126
S A+VNI++ N+ P F S Y F V E +G VG V A+
Sbjct: 3298 YHLTIKAFNVPDEERCSFASVNIQLEGTNEYVPRFVSKLYYFEVSEAASEGTIVGEVFAS 3357
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQ 167
D D G + V+Y + F +D +G I + LD EK++
Sbjct: 3358 DRDLGTDGEVHYLIFGNSRKKGFQIDERSGQIYVSGPLDREKEE 3401
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 73/171 (42%), Gaps = 32/171 (18%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDN---------NTDAASY---FNLDPATEH 72
+ + G T+ Q KA D D G G+V Y L N T A S +++ T
Sbjct: 938 ENWKAGHTIFQAKALDPDEGVNGMVLYSLKQNPKGLFSINEQTGAISLIGQLDINAGTYQ 997
Query: 73 QGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+ + G LSST + + V D+ND P F L YE ++ E + +VHATD
Sbjct: 998 VEILASDMGVPQLSSTFVLTVSVHDVNDNPPVFDQLSYEITILESEPVNSRFFKVHATDK 1057
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYL 170
D G N + YS +++ N GD + LD E Q+ Y+
Sbjct: 1058 DSGVNGEIAYS-------IIEGNAGDAFGIFPDGQLYIKSELDRELQERYI 1101
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 67/143 (46%), Gaps = 13/143 (9%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-ATEHQGPIQDEGGLSSTATVN 89
VT QV D SGK + LD A +F+L AT+ P LSS A VN
Sbjct: 660 VTPRQVFRLDPVSGKLSTISQ--LDREEQA--HFSLQVLATDLGSP-----PLSSVARVN 710
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP--EDIPF 146
+ + D+ND +P F + Y + E + G V V ATD D G N V YS+ + F
Sbjct: 711 VSLLDVNDNSPVFYPVQYFAHIQENEPAGTYVTTVSATDPDMGPNGTVKYSISAGDTSRF 770
Query: 147 VVDANTGDIRTNKALDYEKQQLY 169
V TG I T ALD E++ Y
Sbjct: 771 QVHGKTGIITTKIALDREEKTAY 793
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 75/178 (42%), Gaps = 28/178 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y + ++ +G ++ ++A+ G VEY ++ + S L H G IQ
Sbjct: 1668 YITILKEGEPIGTNVISIEASSP-RGSEAQVEYYIVSVRCEDKSLGRLFTIGRHTGVIQT 1726
Query: 79 EGGL------------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
L + A V I + DIND P F + + +V E
Sbjct: 1727 AAILDREQGVRLYLVDVYAIEKSSVLPRTQRAEVEITLQDINDNPPVFPTDMLDLTVEEN 1786
Query: 115 -QDGLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
DG + ++ A DADEG NA+V Y++ D F VD +GD+ K LD E++ Y
Sbjct: 1787 IGDGSKIMQLTAMDADEGANALVTYTIISGADDSFHVDPESGDLIATKRLDRERRSKY 1844
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 20/159 (12%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY-------FNLDPATEHQGP------- 75
G + + ATD DSG G + Y + +++ + + FNL A +++
Sbjct: 1891 GSLVAAILATDDDSGINGEITYTVSEDDEEGMFFLNPVTGVFNLTRALDYEAQQYYILTI 1950
Query: 76 -IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQN 133
+D GG +T V + DIND P F Y S+ E G A+ TDAD+G N
Sbjct: 1951 RAEDGGGQFATIRVYFNILDINDNPPVFSMTSYSTSLMENLAPGSAILNFSVTDADDGSN 2010
Query: 134 AVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ + +S+ F +D N+G + + LD E Q Y
Sbjct: 2011 SQLSFSIASGDSMGHFGID-NSGVLSIQQPLDRESQSFY 2048
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 27/144 (18%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP-- 75
Y A + G ++ V ++D D+ + ++ RL N S F ++P+T
Sbjct: 2402 MYSATVPEDAPTGTDILLVNSSDADASRNAVI--RLTGGN----SQFTINPSTGQIITSA 2455
Query: 76 --------------IQDEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQD 116
+ +GG LSS+ +V + V D+ND P+FQ PY VP
Sbjct: 2456 LLDRETRENYTLIVVASDGGYPRALSSSTSVLVAVADVNDNPPKFQHHPYVTHVPSPTTS 2515
Query: 117 GLAVGRVHATDADEGQNAVVYYSV 140
G V V TDAD G NA ++YS+
Sbjct: 2516 GSFVFAVTVTDADAGSNAELHYSL 2539
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
SS + + V D+ND PEF+ P+ + E + V A D D G N + Y +
Sbjct: 2683 FSSYKKLEVTVVDVNDNAPEFEQDPFIAEIVENLSPRKLLTVAAVDRDSGLNGQLIYEII 2742
Query: 142 E---DIPFVVDANTGDIRTNKALDYEKQQLY 169
E + F ++ TG+IR+ + LD EK Y
Sbjct: 2743 EGNTENSFSINRATGEIRSVRPLDREKLSRY 2773
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 69/164 (42%), Gaps = 26/164 (15%)
Query: 30 GVTLMQVKATD-KDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---------------- 72
G L++V A D KD G VEY + D + + F LD +T
Sbjct: 3033 GTNLIKVTAVDDKDFGLNSEVEYFVSDES--KTNKFRLDRSTGWISVSSSLMADLNKKFL 3090
Query: 73 -QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+ +D+G LSS V I VT+ N PEF ++PE G + V A D
Sbjct: 3091 FKVKAKDKGNPPLSSEVAVEIVVTEENYHTPEFSQSHMSVTIPESHSVGAVIRTVSARDR 3150
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
D N ++ Y++ E F ++ TG + K LD+E Q +
Sbjct: 3151 DAAMNGLIRYNISSGNEAGNFAINTTTGTLTLAKPLDFELCQKH 3194
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD-------PATEHQGP------- 75
G + V TD D+G + Y L+ N A F++D A E G
Sbjct: 2516 GSFVFAVTVTDADAGSNAELHYSLMGKN---AEKFHIDSARGAILAANELSGESEVTISV 2572
Query: 76 -IQDEGGLSSTATVNIRVTDINDKN-PEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
++D G T + + V +N P+ Q+ F+ PE Q G V + + A G
Sbjct: 2573 HVRDGGRYPKTDSTTVTVRFVNRAEFPQVQAEQETFTFPENQAVGTLVTTISGSSARGG- 2631
Query: 133 NAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYL 170
++ YY ++ F+VD TG + +ALD+E Q Y+
Sbjct: 2632 -SLSYYIASGNLGNTFIVDQVTGQLSVGQALDFEAIQKYV 2670
Score = 39.3 bits (90), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYY 138
G ++ VNI V D+ND +P F +V E + G + + A D DEG N +V Y
Sbjct: 905 GAVTGDTIVNITVKDLNDNSPHFIHAVESVNVVENWKAGHTIFQAKALDPDEGVNGMVLY 964
Query: 139 SVPEDIP--FVVDANTGDIRTNKALD 162
S+ ++ F ++ TG I LD
Sbjct: 965 SLKQNPKGLFSINEQTGAISLIGQLD 990
Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 18/154 (11%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI----QD 78
++QV A D D G + Y L+ N + A + LD + Q + D
Sbjct: 2313 ILQVVARDDDQGLNSKLTYVLVSGNEEGAFILSASGELRLVQSLDRERKEQYVLLITAAD 2372
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAV 135
G L+ T T+ + V D+ND P F Y +VPE G + V+++DAD +NAV
Sbjct: 2373 SGSPALTGTGTITVTVDDVNDNVPTFAFNMYSATVPEDAPTGTDILLVNSSDADASRNAV 2432
Query: 136 VYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ + + F ++ +TG I T+ LD E ++ Y
Sbjct: 2433 IRLT-GGNSQFTINPSTGQIITSALLDRETRENY 2465
Score = 38.9 bits (89), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 69/169 (40%), Gaps = 26/169 (15%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQ 73
+ +G + V ATD DSG + Y + N F++ P T E Q
Sbjct: 1360 ENMRVGELVSSVTATDSDSGDNADLHYSITGTNNHGT--FSISPNTGSIFLAKKLDFETQ 1417
Query: 74 G------PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVH 124
+D+G SST +V I V D ND P F + S+ E G +V V
Sbjct: 1418 SLYKLNITAKDQGRPPRSSTMSVVIYVRDFNDNPPNFPAGDIFKSIIENIPVGSSVISVT 1477
Query: 125 ATDADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
A D+D N + Y++ + P F +D G I TN +D E L+
Sbjct: 1478 ANDSDADINGQLTYAIIQQTPRGNHFRIDEVRGTIFTNAEIDREFANLF 1526
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 67/174 (38%), Gaps = 20/174 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G V+Y + +T + LD
Sbjct: 728 YFAHIQENEPAGTYVTTVSATDPDMGPNGTVKYSISAGDTSRFQVHGKTGIITTKIALDR 787
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V I V D D P F Y F V E G VG
Sbjct: 788 EEKTAYQLQIVATDGGHLQSQNQAIVTITVLDTQDNPPVFSQGMYGFVVFENVALGYHVG 847
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A+ D N + Y D F ++ TG I T +D E+Q Y +V
Sbjct: 848 TVFASTMDLNTN-ISYLITTGDQRGMFAINKVTGQITTASIIDREEQAFYQLKV 900
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
+STA V+I + D+ND P F S P +PE V + ATD D G N+ + YS+
Sbjct: 2066 TSTAQVSIILLDVNDSPPSFIS-PKLTYIPENTPIDTIVFKAQATDPDSGPNSYIEYSLL 2124
Query: 141 -PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
P F + G++R LD E Y V K
Sbjct: 2125 RPLGNKFSIGTIDGEVRLIGELDREAVSNYTLTVVATDK 2163
Score = 35.8 bits (81), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 63/159 (39%), Gaps = 29/159 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD--------------------- 67
+G +++ V A D D+ G + Y ++ T ++F +D
Sbjct: 1469 VGSSVISVTANDSDADINGQLTYAII-QQTPRGNHFRIDEVRGTIFTNAEIDREFANLFE 1527
Query: 68 ---PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVH 124
AT+ P+ E + V I V D ND P F S + P G + +
Sbjct: 1528 LTVKATDQAVPV--ESRRFALKNVTILVMDQNDNVPVFISQNALAADPSVMIGSILTTII 1585
Query: 125 ATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKAL 161
A D DEG N V Y + + F+VD +GD+R AL
Sbjct: 1586 AADPDEGANGEVEYEIINGDTKTFIVDRYSGDLRVASAL 1624
Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 74/201 (36%), Gaps = 60/201 (29%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTA-- 86
LG + + ATD+DSG + Y ++ N +F++ +EH G + G S TA
Sbjct: 499 LGSYVRGLTATDRDSGLNANLRYSIVSGN--ELGWFHI---SEHSGLVTTAGPGSGTAGH 553
Query: 87 ------------------TVNIR------------------VTDINDKNPEF-QSLPYEF 109
+NI + DIND P F Q Y+
Sbjct: 554 AGGASVTSGLDRETTSQVVLNISARDQGVQPKFSYAQLVVTILDINDNKPRFSQPEGYQV 613
Query: 110 SVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDIPFVV---------------DANTG 153
S+ E G + + A D D G N + +S+ E P VV D +G
Sbjct: 614 SLAENSPSGTELLVLSAVDGDLGDNGTIRFSLQEAEPAVVAVGPSSVTPRQVFRLDPVSG 673
Query: 154 DIRTNKALDYEKQQLYLERVF 174
+ T LD E+Q + +V
Sbjct: 674 KLSTISQLDREEQAHFSLQVL 694
>gi|195350165|ref|XP_002041612.1| GM16650 [Drosophila sechellia]
gi|194123385|gb|EDW45428.1| GM16650 [Drosophila sechellia]
Length = 2943
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 31/182 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD----------NNTDAASYFNLDP 68
Y + + ++QV A+D D+G + YR++D +++D + +F + P
Sbjct: 457 YSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSHHFGIFP 516
Query: 69 ATEH---QGPI----QDEGGLSSTATVN------------IRVTDINDKNPEFQSLPYEF 109
+ + P+ +D L+ AT N +RV D ND +P+FQ YEF
Sbjct: 517 NSGWIYLRAPLDREARDRYQLTILATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEF 576
Query: 110 SVPEG-QDGLAVGRVHATDADEGQNAVVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQ 167
+ E + G VG V A+D D G+NA + YS +P + F V TG+I T + LD E ++
Sbjct: 577 RIEENLRRGSVVGVVTASDLDLGENAAIRYSLLPINSSFQVHPVTGEISTREPLDRELRE 636
Query: 168 LY 169
LY
Sbjct: 637 LY 638
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
VNI V D+ND PEF++ SVPE + G + HA D D G + V YS+ +D
Sbjct: 333 VNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKDSGK 392
Query: 146 --FVVDANTGDIRTNKALDYEKQQLY 169
F +DA +G + ++ LDYE Q +
Sbjct: 393 GLFAIDARSGHLILSQHLDYESSQRH 418
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 71/164 (43%), Gaps = 28/164 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------------HQGPIQ--- 77
++ V ATD D G FG V YR++ N A F +D +T P+
Sbjct: 155 IVAVVATDPDYGNFGQVSYRIVAGNE--AGIFRIDRSTGEIFVVRPDMLSVRTQPMHMLN 212
Query: 78 ----DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADE 130
D G L S A V + + D + P F+ Y + V E G VG V A D
Sbjct: 213 ISATDGGNLRSNADAVVFLSIIDAMQRPPIFEKARYNYYVKEDIPRGTVVGSVIAASGDA 272
Query: 131 GQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYE-KQQLYL 170
+ V YS+ P F ++ N+G+IR K LD+E K Q+ L
Sbjct: 273 AHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLL 316
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+S A + I + D ND +P+F + +V EG + G V +VHA D+D G NA + Y +
Sbjct: 1701 LASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHI 1760
Query: 141 PE---DIPFVVD-ANTGDIRTNKALDYEKQQLYLERVF 174
+ D FV++ A +G +RTN LD E + +Y ++
Sbjct: 1761 VDGNHDNAFVIEPAFSGIVRTNIVLDREIRDIYKLKII 1798
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 86 ATVNIRVTDINDKNPEFQ-SLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
AT+ I V D+ND +PEF+ Y SVPE + + V A+D DEG NA + YS+
Sbjct: 1230 ATIYITVGDVNDNSPEFRPGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITGGN 1289
Query: 143 -DIPFVVDANTGDIRTNKALDYEKQQLY 169
F +D+++GD+ + + LD E+ Y
Sbjct: 1290 LGNKFSIDSSSGDL-SARPLDREQNSRY 1316
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVP 141
S+T V I V DIND P F+ PY VP Q G + +V A DAD G NA + YS+
Sbjct: 1437 SATVPVQINVLDINDNRPVFERYPYIGQVPALIQPGQTLLKVQALDADLGANAEIVYSLN 1496
Query: 142 ED-----IPFVVDANTGDIRTNKALDYEKQQ-LYLERV 173
+ F ++ +TG + +++L E + L+LE V
Sbjct: 1497 AENSAVSAKFRINPSTGALSASQSLASESGKLLHLEVV 1534
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 22/145 (15%)
Query: 18 FYGAMAR----DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN------TDAAS----- 62
F +M R + ELG L A DKDSG G V Y L+ ++ DA S
Sbjct: 347 FEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVTYSLVKDSGKGLFAIDARSGHLIL 406
Query: 63 --YFNLDPATEHQGPI-QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ + + + H + +GG LS+ T+ + V D+ND P F+ Y +V E +
Sbjct: 407 SQHLDYESSQRHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKEEYSVNVSESRS 466
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV 140
+ +V+A+D D G NA + Y +
Sbjct: 467 INAQIIQVNASDLDTGNNARITYRI 491
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 61/146 (41%), Gaps = 25/146 (17%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLD----PATEHQGPIQDEGGLSSTATVNIRVTDI 95
D+ SG LV RLLD + S F L+ T P SS TV I V D+
Sbjct: 830 DRHSGN--LVVARLLDR--EVQSEFRLEIRALDTTATNNP------QSSAITVKIEVADV 879
Query: 96 NDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP--------- 145
ND PE+ P + V E G + ATDAD G N + Y + P
Sbjct: 880 NDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQA 939
Query: 146 -FVVDANTGDIRTNKALDYEKQQLYL 170
F +D+ TG + LD+E Q YL
Sbjct: 940 IFSMDSLTGALSLQAPLDFEAVQEYL 965
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 25/145 (17%)
Query: 36 VKATDKDSGKFGLVEY--------------RLLDNNTDAASYFNLDPATEHQGPI--QDE 79
V A+D D G +V Y R A + + + ++ P+ D
Sbjct: 49 VSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSYEFPVLATDR 108
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSV------PEGQDGLAVGRVHATDADEGQN 133
GGLS+TA + +++TD+ND P F Y+ S+ P + V ATD D G
Sbjct: 109 GGLSTTAMIKMQLTDVNDNRPVFYPREYKVSLRESPKAPSQASSTPIVAVVATDPDYGNF 168
Query: 134 AVVYYSV---PEDIPFVVDANTGDI 155
V Y + E F +D +TG+I
Sbjct: 169 GQVSYRIVAGNEAGIFRIDRSTGEI 193
Score = 42.7 bits (99), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 25/157 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--FNLDPAT---------------- 70
+G ++ + A+D D G FG + Y + +D +S+ F +D +
Sbjct: 2264 VGSSVFRAHASDLDKGPFGQLNYSIGPVPSDESSWKMFRVDSESGLVTSAFVFDYEQRQR 2323
Query: 71 -EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG---QDGLAVGRVHAT 126
+ + D GG ++ V + + ++ P+F Y F +P G VG+V AT
Sbjct: 2324 YDMELLASDMGGKKASVAVRVEIESRDEFTPQFTERTYRFVLPAAVALPQGYVVGQVTAT 2383
Query: 127 DADEGQNAVVYY--SVPEDIPFVVDANTGDIRTNKAL 161
D+D G + V Y S P F V+ ++G + + L
Sbjct: 2384 DSDSGPDGRVVYQLSAPHS-HFKVNRSSGAVLIKRKL 2419
Score = 42.7 bits (99), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 70/165 (42%), Gaps = 42/165 (25%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI---------- 76
G + V A+D D G+ + Y LL N S F + P T + P+
Sbjct: 585 GSVVGVVTASDLDLGENAAIRYSLLPIN----SSFQVHPVTGEISTREPLDRELRELYDL 640
Query: 77 ----QDEGGLSSTATVNIRV-TDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
+D+G +A V +R+ D+ SV E Q G V RV A D D
Sbjct: 641 VVEARDQGTPVRSARVPVRIHEDV-------------VSVREEQPPGTEVVRVRAVDRDN 687
Query: 131 GQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
GQNA + YS+ + F +D +G IRT LD+E++ +Y
Sbjct: 688 GQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHEERSIY 732
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI 144
+ I V D ND P F+ Y SV E +V ++ A DAD G NA + YS+ +
Sbjct: 1335 CNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLSTSVVQISAVDADLGVNARLVYSLANET 1394
Query: 145 --PFVVDANTGDIRTNKALDYEKQQLY 169
F +D+ +G I T LD E Q Y
Sbjct: 1395 QWQFAIDSQSGLITTVGKLDRELQASY 1421
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 16/126 (12%)
Query: 54 LDNNTDAASYFNLDPA--TEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
LD ++ A SY + A + HQ P L S + + D ND P+F Y +
Sbjct: 2205 LDYDSGAKSYELIIRACDSHHQRP------LCSLQPFRLELHDENDNEPKFPLSEYVHFL 2258
Query: 112 PEGQD-GLAVGRVHATDADEGQNAVVYYS---VPEDIP----FVVDANTGDIRTNKALDY 163
E + G +V R HA+D D+G + YS VP D F VD+ +G + + DY
Sbjct: 2259 AENEPVGSSVFRAHASDLDKGPFGQLNYSIGPVPSDESSWKMFRVDSESGLVTSAFVFDY 2318
Query: 164 EKQQLY 169
E++Q Y
Sbjct: 2319 EQRQRY 2324
Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 85/196 (43%), Gaps = 37/196 (18%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT---------EHQ 73
R++ G +++V+A D+D+G+ + Y ++ ++D F++DP + +H+
Sbjct: 668 REEQPPGTEVVRVRAVDRDNGQNASITYSIVKGRDSDGHGLFSIDPTSGVIRTRVVLDHE 727
Query: 74 -------GPIQDEGGLSSTATVN---IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGR 122
G +GG TV + V D+ND P F S F V E G VG
Sbjct: 728 ERSIYRLGVAASDGGSPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGS 787
Query: 123 VHATD--ADEGQNAV--------VYYSVPE------DIPFVVDANTGDIRTNKALDYEKQ 166
+ + AD +N+V V Y++ + F +D ++G++ + LD E Q
Sbjct: 788 ISPIERPADVVRNSVEKSFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQ 847
Query: 167 QLYLERVFLISKFATS 182
+ + + AT+
Sbjct: 848 SEFRLEIRALDTTATN 863
Score = 38.9 bits (89), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 69/167 (41%), Gaps = 42/167 (25%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------------ 77
G + QV A D D+G + Y ++D N D A F ++PA G ++
Sbjct: 1737 GTFVAQVHAFDSDAGSNARLRYHIVDGNHDNA--FVIEPA--FSGIVRTNIVLDREIRDI 1792
Query: 78 --------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEF-SVPEGQD----GLAVGR 122
DEG ++ TAT+ +++ D+ND P F P +V E D R
Sbjct: 1793 YKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTFP--PNNLVTVSEANDVDTYPALTYR 1850
Query: 123 VHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ A + +N + F +D +G + + LDYE QQ Y
Sbjct: 1851 LGAESTVDIENMSI---------FALDRYSGKLVLKRRLDYELQQEY 1888
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 67/170 (39%), Gaps = 37/170 (21%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLD-----NNTDAASYFNLDPAT---EHQGPIQDEG 80
+G + ATD D+G G ++YRL+ N + + F++D T Q P+ E
Sbjct: 901 VGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAIFSMDSLTGALSLQAPLDFEA 960
Query: 81 -------------------GLSSTATVNIRVTDINDKNPEFQS-------LPYEFSVPEG 114
L ++ TV ++V D ND P+F S F
Sbjct: 961 VQEYLLIVQALDQSSNVTERLQTSVTVRLQVLDANDNAPQFVSPNANGGKTASLFISDAT 1020
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKAL 161
+ G V + A D D G N + Y + + F +++ TG I K+L
Sbjct: 1021 RIGEVVAHIVAVDEDSGDNGRLTYEITGGNGEGRFRINSQTGVIELVKSL 1070
>gi|301612243|ref|XP_002935628.1| PREDICTED: cadherin-9-like [Xenopus (Silurana) tropicalis]
Length = 780
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 87/181 (48%), Gaps = 31/181 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + E+G +++QV A D D +G +++ + YF++DP +
Sbjct: 154 YYASVPEMSEVGTSVIQVTALDNDDPSYG-NSAKIVYSIIQGQPYFSIDPESGIIKTALP 212
Query: 71 -------EH-QGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
EH Q IQ + GGLS T TVNI +TD+ND P F Y+FS E
Sbjct: 213 DMNRENREHYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSIYQFSSTESAA 272
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQL 168
G A+GR+ A D D G+NA ++Y + + DI + G I K LD+E ++L
Sbjct: 273 IGKAIGRIKANDEDMGKNAEIHYKIIDGDEEGHFDIITDQETQEGIITVKKLLDFESRRL 332
Query: 169 Y 169
+
Sbjct: 333 H 333
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 73/176 (41%), Gaps = 47/176 (26%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA---------------------------- 60
+G + ++KA D+D GK + Y+++D + +
Sbjct: 273 IGKAIGRIKANDEDMGKNAEIHYKIIDGDEEGHFDIITDQETQEGIITVKKLLDFESRRL 332
Query: 61 ------ASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
AS N++P H GP +D TATV + + D D+ P F Y V E
Sbjct: 333 HTFEVEASNMNVEPRFFHLGPFKD------TATVKVVLQDA-DEAPVFSKSFYVIEVDED 385
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEK 165
++G VG+V A D D +N V YS+ + F + + G I K+LD E+
Sbjct: 386 AKEGNIVGQVTAQDPDSSKNP-VRYSIDRNTDIEKMFSIYSGNGSIFLEKSLDREE 440
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G+ + Y + F++D NTGDI+ K LD E++ +Y+
Sbjct: 58 GSDTQYVGKLH-TDHDKGEGNLKYILSGDGAGSVFIIDENTGDIQAAKRLDREEKSMYVL 116
Query: 172 RVFLISK 178
R I +
Sbjct: 117 RAMAIDR 123
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE + G +V +V A D D+ G +A + YS+ + P
Sbjct: 137 IKIHDINDNEPKFTKDVYYASVPEMSEVGTSVIQVTALDNDDPSYGNSAKIVYSIIQGQP 196
Query: 146 -FVVDANTGDIRT 157
F +D +G I+T
Sbjct: 197 YFSIDPESGIIKT 209
>gi|119576776|gb|EAW56372.1| cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog,
Drosophila) [Homo sapiens]
Length = 2924
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 85/181 (46%), Gaps = 26/181 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS-YFNLDPAT---EHQG 74
Y R+ E+G ++ V+ATD D+ + YRLL+ + + S F +DP + +G
Sbjct: 295 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRSGVIRTRG 354
Query: 75 PI------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D G S+TA V + V D ND P+F Y V E
Sbjct: 355 PVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYVVQVREDVT 414
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLER 172
G V RV A+D D+G NAVV+YS+ F +DA TG + LDYE + Y R
Sbjct: 415 PGAPVLRVTASDRDKGSNAVVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLR 474
Query: 173 V 173
V
Sbjct: 475 V 475
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LD 67
Y R+ G +++V A+D+D G +V Y ++ N Y + LD
Sbjct: 405 YVVQVREDVTPGAPVLRVTASDRDKGSNAVVHYSIMSGNARGQFYLDAQTGALDVVSPLD 464
Query: 68 PATEHQGPIQ---DEGG---LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
T + ++ +GG LS+ + V ++V DIND P F S P++ +V E G
Sbjct: 465 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 524
Query: 120 VGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V A DAD G NA + Y V D PF ++ TG I LD E+ Y
Sbjct: 525 VLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFY 577
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------------AASYFNLDPATEHQ-- 73
+G +++ V A D+D+ ++ Y++ NT + LD E Q
Sbjct: 626 VGTSVVTVSAVDRDA--HSVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYV 683
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G TA + + VTD N P FQS Y +V E + G V + ATD D G
Sbjct: 684 LAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 743
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + IP F +DA+TG + T LDYE Q Y
Sbjct: 744 ENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSY 782
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 33/181 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPATE---- 71
Y A + G + ++A D D G+ G +EY L D+ ++ +F+LDP T
Sbjct: 187 YQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSN--QFFSLDPVTGAVTT 244
Query: 72 -------------HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ QD G S+ AT+ I VTD ND +P F+ Y+ S+ E +
Sbjct: 245 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 304
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV-------PEDIPFVVDANTGDIRTNKALDYEKQQL 168
G V V ATD D NA + Y + P ++ F +D +G IRT +D E+ +
Sbjct: 305 VGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEV-FEIDPRSGVIRTRGPVDREEVES 363
Query: 169 Y 169
Y
Sbjct: 364 Y 364
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLDPATEHQGPIQD- 78
+++Q+ ATD+DSG G V Y + + LD Q ++
Sbjct: 834 SVLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAY 893
Query: 79 --EGGLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
+ G+ T V + V D+ND P F+ ++ V E GLAV RV ATD DEG
Sbjct: 894 AVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGT 953
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 954 NAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYEDRPEYV 994
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSSTA 86
G T++ + ATD+D+G+ + Y + D+ F +D A Q + E +S T
Sbjct: 729 GTTVVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTL 784
Query: 87 TVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
+ R V D+ND P+F Y+ SV E +V ++ ATD D
Sbjct: 785 AITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRD 844
Query: 130 EGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N V+Y+ D F+V++ +G +RT + LD E Y+ R + + K
Sbjct: 845 SGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYAVDK 897
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 32/163 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G+ + +V ATD D G + Y++++ N F LD + + D
Sbjct: 937 IGLAVARVTATDPDEGTNAQIMYQIVEGNI--PEVFQLDIFSGELTALVDLDYEDRPEYV 994
Query: 79 ------EGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRV 123
L S ATV++R+ D ND P + F S P G A+GRV
Sbjct: 995 LVIQATSAPLVSRATVHVRLLDRNDNPPVLGNFEILFNNYVTNRSSSFPGG----AIGRV 1050
Query: 124 HATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
A D D + + ++ V ++A+TG+++ ++ALD +
Sbjct: 1051 PAHDPDISDSLTYSFERGNELSLVLLNASTGELKLSRALDNNR 1093
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 32/136 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASY-------------FN 65
LG ++ V+A D D+G +EYRL ++N T S F
Sbjct: 521 LGYLVLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFYSFG 580
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
++ A +H P L+++A+V++ V D+ND NP F Y + E G +V V
Sbjct: 581 VE-ARDHGTP-----ALTASASVSVTVLDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVS 634
Query: 125 ATDADEGQNAVVYYSV 140
A D D ++V+ Y +
Sbjct: 635 AVDRDA--HSVITYQI 648
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 100 PEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV------PEDIPFVVDANT 152
P+FQ Y+ +VPE Q G V + A D DEG+ + Y++ + F +D T
Sbjct: 180 PQFQPPSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPVT 239
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G + T + LD E + ++ RV
Sbjct: 240 GAVTTAEELDRETKSTHVFRV 260
>gi|13325064|ref|NP_001399.1| cadherin EGF LAG seven-pass G-type receptor 2 precursor [Homo
sapiens]
gi|22095550|sp|Q9HCU4.1|CELR2_HUMAN RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 2;
AltName: Full=Cadherin family member 10; AltName:
Full=Epidermal growth factor-like protein 2;
Short=EGF-like protein 2; AltName: Full=Flamingo homolog
3; AltName: Full=Multiple epidermal growth factor-like
domains protein 3; Short=Multiple EGF-like domains
protein 3; Flags: Precursor
gi|9828190|gb|AAG00080.1|AF234887_1 FLAMINGO 1 [Homo sapiens]
gi|21929188|dbj|BAC06168.1| seven transmembrane helix receptor [Homo sapiens]
Length = 2923
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 85/181 (46%), Gaps = 26/181 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS-YFNLDPAT---EHQG 74
Y R+ E+G ++ V+ATD D+ + YRLL+ + + S F +DP + +G
Sbjct: 294 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRSGVIRTRG 353
Query: 75 PI------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D G S+TA V + V D ND P+F Y V E
Sbjct: 354 PVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYVVQVREDVT 413
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLER 172
G V RV A+D D+G NAVV+YS+ F +DA TG + LDYE + Y R
Sbjct: 414 PGAPVLRVTASDRDKGSNAVVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLR 473
Query: 173 V 173
V
Sbjct: 474 V 474
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LD 67
Y R+ G +++V A+D+D G +V Y ++ N Y + LD
Sbjct: 404 YVVQVREDVTPGAPVLRVTASDRDKGSNAVVHYSIMSGNARGQFYLDAQTGALDVVSPLD 463
Query: 68 PATEHQGPIQ---DEGG---LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
T + ++ +GG LS+ + V ++V DIND P F S P++ +V E G
Sbjct: 464 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 523
Query: 120 VGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V A DAD G NA + Y V D PF ++ TG I LD E+ Y
Sbjct: 524 VLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFY 576
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------------AASYFNLDPATEHQ-- 73
+G +++ V A D+D+ ++ Y++ NT + LD E Q
Sbjct: 625 VGTSVVTVSAVDRDA--HSVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYV 682
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G TA + + VTD N P FQS Y +V E + G V + ATD D G
Sbjct: 683 LAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 742
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + IP F +DA+TG + T LDYE Q Y
Sbjct: 743 ENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSY 781
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 33/181 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPATE---- 71
Y A + G + ++A D D G+ G +EY L D+ ++ +F+LDP T
Sbjct: 186 YQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSN--QFFSLDPVTGAVTT 243
Query: 72 -------------HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ QD G S+ AT+ I VTD ND +P F+ Y+ S+ E +
Sbjct: 244 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 303
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV-------PEDIPFVVDANTGDIRTNKALDYEKQQL 168
G V V ATD D NA + Y + P ++ F +D +G IRT +D E+ +
Sbjct: 304 VGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEV-FEIDPRSGVIRTRGPVDREEVES 362
Query: 169 Y 169
Y
Sbjct: 363 Y 363
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLDPATEHQGPIQD- 78
+++Q+ ATD+DSG G V Y + + LD Q ++
Sbjct: 833 SVLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAY 892
Query: 79 --EGGLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
+ G+ T V + V D+ND P F+ ++ V E GLAV RV ATD DEG
Sbjct: 893 AVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGT 952
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 953 NAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYEDRPEYV 993
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSSTA 86
G T++ + ATD+D+G+ + Y + D+ F +D A Q + E +S T
Sbjct: 728 GTTVVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTL 783
Query: 87 TVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
+ R V D+ND P+F Y+ SV E +V ++ ATD D
Sbjct: 784 AITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRD 843
Query: 130 EGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N V+Y+ D F+V++ +G +RT + LD E Y+ R + + K
Sbjct: 844 SGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYAVDK 896
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 32/163 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G+ + +V ATD D G + Y++++ N F LD + + D
Sbjct: 936 IGLAVARVTATDPDEGTNAQIMYQIVEGNI--PEVFQLDIFSGELTALVDLDYEDRPEYV 993
Query: 79 ------EGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRV 123
L S ATV++R+ D ND P + F S P G A+GRV
Sbjct: 994 LVIQATSAPLVSRATVHVRLLDRNDNPPVLGNFEILFNNYVTNRSSSFPGG----AIGRV 1049
Query: 124 HATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
A D D + + ++ V ++A+TG+++ ++ALD +
Sbjct: 1050 PAHDPDISDSLTYSFERGNELSLVLLNASTGELKLSRALDNNR 1092
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 32/136 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASY-------------FN 65
LG ++ V+A D D+G +EYRL ++N T S F
Sbjct: 520 LGYLVLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFYSFG 579
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
++ A +H P L+++A+V++ V D+ND NP F Y + E G +V V
Sbjct: 580 VE-ARDHGTP-----ALTASASVSVTVLDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVS 633
Query: 125 ATDADEGQNAVVYYSV 140
A D D ++V+ Y +
Sbjct: 634 AVDRDA--HSVITYQI 647
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 100 PEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV------PEDIPFVVDANT 152
P+FQ Y+ +VPE Q G V + A D DEG+ + Y++ + F +D T
Sbjct: 179 PQFQPPSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPVT 238
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G + T + LD E + ++ RV
Sbjct: 239 GAVTTAEELDRETKSTHVFRV 259
>gi|345305479|ref|XP_001509569.2| PREDICTED: protocadherin-20-like [Ornithorhynchus anatinus]
Length = 981
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 82/163 (50%), Gaps = 26/163 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQGPIQ 77
L ++ ATD DSG+ G V Y L DA SYF+LD T +++ ++
Sbjct: 584 LTKLHATDADSGERGAVSYFL---GPDAPSYFSLDKLTGVLTVSTQLDREEKEKYRYTVR 640
Query: 78 D-EGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQ 132
+ GL S ATV I V D ND +P F + + F +PE GL +G + TDAD G+
Sbjct: 641 AVDSGLPPRESVATVAITVLDKNDNSPRFINKDFSFFIPENFPGLGEIGVISVTDADSGR 700
Query: 133 NAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
N V SV DI FV+D G +R +LD E+Q Y+ V
Sbjct: 701 NGWVALSVMNRSDI-FVIDTGNGMLRAKVSLDREQQSSYILWV 742
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 71/167 (42%), Gaps = 30/167 (17%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDN---------NTDAASYFNLDPATEHQGPIQD 78
E+GV + TD DSG+ G V +++ N + +LD + +
Sbjct: 687 EIGV----ISVTDADSGRNGWVALSVMNRSDIFVIDTGNGMLRAKVSLDREQQSSYILWV 742
Query: 79 E---GG---LSSTATVNIRVTDINDKNPEFQSLP-----YEFSVPEGQDGLAVGRVHATD 127
E GG LSS A + I + DIND NP P Y +P G + V+A D
Sbjct: 743 EAVDGGEPALSSIAKITILLLDIND-NPPLVLFPQSNMSYLLVLPSTLPGSPITEVYAVD 801
Query: 128 ADEGQNAVVYYSV-----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D G NAV+ YS+ P F +D TG+I +AL LY
Sbjct: 802 KDTGMNAVIAYSIIGRRGPRPESFRIDPKTGNITLEEALMQNDYGLY 848
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 7/133 (5%)
Query: 44 GKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI----QDEGGLSSTATVNIRVTDINDKN 99
G F L Y++ N + LD T+ I + G ++ ++V D ND
Sbjct: 503 GPFRLSPYQVYSNEYLLETTKPLDYETQQLYEIAVVAWNSEGFRVQKSIQVQVLDDNDNA 562
Query: 100 PEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIR 156
P F E S+ E A + ++HATDAD G+ V Y + D P F +D TG +
Sbjct: 563 PVFAQSLIELSIEENNAPDAFLTKLHATDADSGERGAVSYFLGPDAPSYFSLDKLTGVLT 622
Query: 157 TNKALDYEKQQLY 169
+ LD E+++ Y
Sbjct: 623 VSTQLDREEKEKY 635
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 59/147 (40%), Gaps = 29/147 (19%)
Query: 38 ATDKDSGKFGLVEYRLLD------------NNTDAASYFNLDPATEHQGP-------IQD 78
A D D G G+ YRLLD N + Y + A + + + +
Sbjct: 264 AVDPDVGANGVQTYRLLDYHGVFTLDVEENENGERTPYLIIMGALDRETQDRYVTVIVAE 323
Query: 79 EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEGQNA 134
+GG L +AT+ I + D+ND P F +V G V V A D D G NA
Sbjct: 324 DGGTPPLLGSATLTIGIGDVNDNCPLFADSQVNVTVFGNATVGAPVAAVRAVDRDLGSNA 383
Query: 135 VVYYSVPEDIP------FVVDANTGDI 155
+ Y+ + +P F +D TG I
Sbjct: 384 QIAYAYSQKVPQPSKDLFHLDEVTGII 410
>gi|326918941|ref|XP_003205743.1| PREDICTED: protocadherin Fat 4-like [Meleagris gallopavo]
Length = 5008
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 23/161 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F++DP + E +
Sbjct: 1795 GSKIMQLTAMDADEGANALVTYTIISGADDS---FHVDPESGDLIATKRLDRERRSKYSL 1851
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQ 132
D+G SS +NI V+D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1852 LVRADDGLQSSDMRINITVSDVNDHIPKFSKPVYSFDIPEDATPGSLVAAILATDDDSGI 1911
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYL 170
N + Y+V ED F ++ TG +ALDYE QQ Y+
Sbjct: 1912 NGEITYTVSEDDEEGMFFLNPVTGVFNLTRALDYEAQQYYI 1952
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 77/166 (46%), Gaps = 22/166 (13%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------E 71
+ H +G + V A D+D+ GL+ Y + N N T +
Sbjct: 3124 ESHSVGAVIRTVSARDRDAAMNGLIRYNISSGNEAGNFAINTTTGTLTLAKPLDFELCQK 3183
Query: 72 HQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
H + D G +S T +V I V D+ND +P F Y V E G V R++A+
Sbjct: 3184 HDLIVTATDGGWVSRTGFCSVTINVIDVNDNSPAFSPEDYFPKVLENAPSGTTVIRLNAS 3243
Query: 127 DADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
DAD G NAV+ Y++ D+ FV+D NTG I T LDYE +Q Y
Sbjct: 3244 DADSGPNAVIAYAIQSSDSDL-FVIDPNTGTITTQGFLDYETKQSY 3288
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 24/162 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
L+ V A D+DSG G + Y +++ NT+ + FN++ AT I+
Sbjct: 2711 LLTVAAVDRDSGLNGQLIYEIIEGNTENS--FNINRATGEIRSIRPLDREKLSQYTLTIK 2768
Query: 78 --DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G S+T V I V D ND P F + + SVPE G V RV +D D G
Sbjct: 2769 ASDKGTPLQSTTVKVIINVLDENDNAPRFSQI-FSASVPENAPLGFTVTRVTTSDEDIGM 2827
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA+ YS+ + +PF+++ +TGDI ++ L+ E Y RV
Sbjct: 2828 NAISRYSIRDTSLPFIINPSTGDITVSRLLNREDTDRYRIRV 2869
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 75/178 (42%), Gaps = 38/178 (21%)
Query: 30 GVTLMQVKATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP---IQDEGGLSS 84
G L+ ATD DSG G+ YR++ N + N+ +G + +GGL
Sbjct: 141 GRQLILDTATDADSGTNGVDHSSYRIVSGNEEGRFRLNITLNPSGEGAFLHLVSQGGLDR 200
Query: 85 TAT----------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
AT VN+ V DIND P F Y+ VPE G +V
Sbjct: 201 EATPSYQLLVQVEDKGEPRRRGYLQVNVTVQDINDNPPVFSQTLYQARVPEDAPVGASVL 260
Query: 122 RVHATDADEGQNAVVYYSV----------PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V A DADEG NA + Y + +PF VD +G IR + LDYE Q Y
Sbjct: 261 QVAAADADEGTNADIRYRLEGGDGGGGEGASSLPFEVDPESGVIRIREHLDYELCQQY 318
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 76/160 (47%), Gaps = 25/160 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------EHQGP------IQ 77
+++V A+D D G GL+ Y ++ N + F +D +T +H+ IQ
Sbjct: 1268 VLRVSASDVDEGTNGLIHYSVIKGNEEKQ--FAIDSSTGQVTLVGKLDHEATASYSLVIQ 1325
Query: 78 --DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D G LSST T++I V D ND +P F V E G V V ATD+D G
Sbjct: 1326 AVDSGAVPLSSTCTLSIDVLDENDNSPSFPKSILSVDVLENMRVGELVSSVTATDSDSGD 1385
Query: 133 NAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
NA ++YS+ F + NTG I K LD+E Q LY
Sbjct: 1386 NADLHYSITGTNNHGTFSISPNTGSIFLAKKLDFETQSLY 1425
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 85/188 (45%), Gaps = 23/188 (12%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF--------- 64
D L Y + + +V+A+DKDSG G + Y +++ N DA F
Sbjct: 1036 DQLSYEITILESEPVNSRFFKVQASDKDSGVNGEIAYSIIEGNAGDAFGIFPDGQLYIKS 1095
Query: 65 NLDPATEHQGPI----QDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQDGL 118
LD + + + D ATVNI V D+ND P F S Y F E Q G
Sbjct: 1096 ELDRELQERYVLLVVASDRAVEPLNATVNITVILEDVNDNRPLFNSTNYVFYFEEEQSGG 1155
Query: 119 A-VGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLER---V 173
+ VG+++A D D G N V YS P F ++ TG+IR+ D ++ L +R V
Sbjct: 1156 SYVGKINAVDKDFGPNGEVRYSFEHMQPDFELNTITGEIRSTHQFD--REALMRQRGAAV 1213
Query: 174 FLISKFAT 181
F ++ AT
Sbjct: 1214 FSLTVIAT 1221
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 77/171 (45%), Gaps = 32/171 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++++ A+D DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3234 GTTVIRLNASDADSGPNAVIAYAIQSSDSD---LFVIDPNT---GTITTQGFLDYETKQS 3287
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHAT 126
S A+VNI++ N+ P F S Y F V E +G VG V A+
Sbjct: 3288 YHLTIKAFNVPDEERCSFASVNIQLEGTNEYVPRFVSKLYYFEVSEAASEGTIVGEVFAS 3347
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
D D G + V+Y + F +D +G I + LD EK++ RV
Sbjct: 3348 DRDLGTDGEVHYLIFGNSRKKGFQIDGRSGQIYVSGPLDREKEERISLRVL 3398
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 13/117 (11%)
Query: 60 AASYFNLDPATEHQG---PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
A+ F+L QG P++D+ ATV I + DIND P+F Y+ +V E
Sbjct: 1210 GAAVFSLTVIATDQGLPKPLKDQ------ATVQIYMKDINDNAPKFLKDLYQATVSELAA 1263
Query: 117 GLA-VGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
L V RV A+D DEG N +++YSV E+ F +D++TG + LD+E Y
Sbjct: 1264 NLTQVLRVSASDVDEGTNGLIHYSVIKGNEEKQFAIDSSTGQVTLVGKLDHEATASY 1320
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 71/163 (43%), Gaps = 14/163 (8%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-----------NTDAASYF 64
S + A + LG T+ +V +D+D G + Y + D + +
Sbjct: 2798 SQIFSASVPENAPLGFTVTRVTTSDEDIGMNAISRYSIRDTSLPFIINPSTGDITVSRLL 2857
Query: 65 NLDPATEHQGPIQ-DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR 122
N + ++ + + G + + V + VTD+ND P F Y PE GL V +
Sbjct: 2858 NREDTDRYRIRVSAHDSGWTVSTDVTVFVTDVNDNAPRFTKPSYYLECPELPGIGLKVTQ 2917
Query: 123 VHATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYE 164
V ATD DEG N ++Y + F ++A TG+I + L Y+
Sbjct: 2918 VSATDPDEGSNGHIFYFIKSQSEFFRINATTGEIFNKQYLRYQ 2960
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 70/147 (47%), Gaps = 13/147 (8%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-ATEHQGPIQDEGGLSSTATVN 89
VT QV D SGK + LD A +F+L AT+ P LSS A VN
Sbjct: 665 VTPRQVFRLDPVSGKLSTISQ--LDREEQA--HFSLQVLATDLGSP-----PLSSVARVN 715
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP--EDIPF 146
+ + D+ND +P F + Y + E + G V V ATD D G N V YS+ + F
Sbjct: 716 VSLLDVNDNSPVFYPVQYFAHIQENEPAGTYVTTVSATDPDMGPNGTVKYSISAGDTSRF 775
Query: 147 VVDANTGDIRTNKALDYEKQQLYLERV 173
V + TG I T ALD E++ Y +V
Sbjct: 776 QVHSKTGIITTKIALDREERTAYQLQV 802
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 23/161 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEY--------RLLDNNTDAASYFNLDPATEHQGPIQDEGG 81
G L+QV A D D G G V + LD + + + P D
Sbjct: 2209 GTDLIQVLAADGDEGTNGQVHSVTGVITVAKPLDRERKPSYMLTVQSSDRGSSPRTD--- 2265
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDADEGQNAVVYY- 138
T TVNI + D+ND P F+ PY +VPE + L + +V A D D+G N+ + Y
Sbjct: 2266 ---TTTVNIVLKDVNDYIPTFELSPYNVNVPENLETLPKVILQVVARDDDQGLNSKLTYV 2322
Query: 139 --SVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
S E+ F + A +G++R ++LD E ++ Y V LI+
Sbjct: 2323 LVSGNEEGAFTLSA-SGELRLVQSLDRETKEQY---VLLIT 2359
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 74/178 (41%), Gaps = 28/178 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y + ++ +G ++ ++A G VEY ++ + S L H G IQ
Sbjct: 1673 YITILKEGEPIGTNVISIEAASP-RGSEAQVEYYIVSVRCEDKSLGRLFTIGRHTGVIQT 1731
Query: 79 EGGL------------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
L + A V I + DIND P F + + +V E
Sbjct: 1732 AAILDREQGVRLYLVDVYAIEKSSILPRTQRAEVEITLQDINDNPPVFPTDMLDLTVEEN 1791
Query: 115 -QDGLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
DG + ++ A DADEG NA+V Y++ D F VD +GD+ K LD E++ Y
Sbjct: 1792 IGDGSKIMQLTAMDADEGANALVTYTIISGADDSFHVDPESGDLIATKRLDRERRSKY 1849
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 72/159 (45%), Gaps = 20/159 (12%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY-------FNLDPATEHQGP------- 75
G + + ATD DSG G + Y + +++ + + FNL A +++
Sbjct: 1896 GSLVAAILATDDDSGINGEITYTVSEDDEEGMFFLNPVTGVFNLTRALDYEAQQYYILTI 1955
Query: 76 -IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQN 133
+D GG +T V + DIND P F Y S+ E G A+ TDAD+G N
Sbjct: 1956 RAEDGGGQFTTIRVYFNILDINDNPPVFSMTSYSTSLMENLAPGSAILNFSVTDADDGSN 2015
Query: 134 AVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ + +S+ F +D N+G + + LD EKQ Y
Sbjct: 2016 SQLSFSIASGDSVGHFGID-NSGVLSIQQPLDREKQSFY 2053
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 72/171 (42%), Gaps = 32/171 (18%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDN---------NTDAASY---FNLDPATEH 72
+ + G T+ Q KA D D G G+V Y L N T A S +++ T
Sbjct: 943 ENWKAGHTIFQAKALDPDEGVNGMVLYSLKQNPKGLFSINEQTGAISLIGQLDINAGTYQ 1002
Query: 73 QGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+ + G LSST + + V D+ND P F L YE ++ E + +V A+D
Sbjct: 1003 VEILASDMGVPQLSSTFILTVSVHDVNDNPPVFDQLSYEITILESEPVNSRFFKVQASDK 1062
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYL 170
D G N + YS +++ N GD + LD E Q+ Y+
Sbjct: 1063 DSGVNGEIAYS-------IIEGNAGDAFGIFPDGQLYIKSELDRELQERYV 1106
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 27/144 (18%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP-- 75
Y A + G ++ V ++D D+ + ++ RL N S F ++P+T
Sbjct: 2392 MYSAAVPEDAPTGTDILLVNSSDADASRNAVI--RLTGGN----SQFTINPSTGQIITSA 2445
Query: 76 --------------IQDEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQD 116
+ +GG LSS+ +V + V D+ND P+FQ PY VP
Sbjct: 2446 LLDRETRENYTLVVVASDGGYPKALSSSTSVLVAVADVNDNPPKFQHHPYVTHVPSPTTS 2505
Query: 117 GLAVGRVHATDADEGQNAVVYYSV 140
G V V TDAD G NA ++YS+
Sbjct: 2506 GSFVFAVTVTDADTGSNAELHYSL 2529
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 63/158 (39%), Gaps = 29/158 (18%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEG------------ 80
+ + +ATD DSG +EY LL + S +D G + E
Sbjct: 2108 VFKAQATDPDSGPNSYIEYSLLRPLGNKFSIGTIDGEVRLIGELDREAVSNYTLTVVATD 2167
Query: 81 ----GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
LSS+ V + V DIND NP F Y + E G + +V A D DEG N
Sbjct: 2168 KGQPSLSSSTDVIVIVLDINDNNPIFAQKLYRVELEENTLTGTDLIQVLAADGDEGTNGQ 2227
Query: 136 VYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V+ + TG I K LD E++ Y+ V
Sbjct: 2228 VH------------SVTGVITVAKPLDRERKPSYMLTV 2253
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 69/164 (42%), Gaps = 26/164 (15%)
Query: 30 GVTLMQVKATD-KDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---------------- 72
G L++V A D KD G VEY L D + + F LD +T
Sbjct: 3023 GTNLIKVTAVDDKDFGLNSEVEYFLSDES--KTNKFRLDRSTGWISVSSSLMADLNKKFL 3080
Query: 73 -QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+ +D+G LSS V I VT+ N PEF ++PE G + V A D
Sbjct: 3081 FKVKAKDKGNPPLSSEVAVEIVVTEENYHTPEFSQSHMTVTIPESHSVGAVIRTVSARDR 3140
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
D N ++ Y++ E F ++ TG + K LD+E Q +
Sbjct: 3141 DAAMNGLIRYNISSGNEAGNFAINTTTGTLTLAKPLDFELCQKH 3184
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
SS + + V D+ND PEF+ P+ + E + V A D D G N + Y +
Sbjct: 2673 FSSYKKLEVTVVDVNDNAPEFEQDPFIAEIVENLSPRKLLTVAAVDRDSGLNGQLIYEII 2732
Query: 142 E---DIPFVVDANTGDIRTNKALDYEKQQLY 169
E + F ++ TG+IR+ + LD EK Y
Sbjct: 2733 EGNTENSFNINRATGEIRSIRPLDREKLSQY 2763
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 18/154 (11%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI----QD 78
++QV A D D G + Y L+ N + A + LD T+ Q + D
Sbjct: 2303 ILQVVARDDDQGLNSKLTYVLVSGNEEGAFTLSASGELRLVQSLDRETKEQYVLLITAAD 2362
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAV 135
G L+ T T+ + V D+ND P F Y +VPE G + V+++DAD +NAV
Sbjct: 2363 SGSPALTGTGTITVTVDDVNDNVPTFAFNMYSAAVPEDAPTGTDILLVNSSDADASRNAV 2422
Query: 136 VYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ + + F ++ +TG I T+ LD E ++ Y
Sbjct: 2423 IRLT-GGNSQFTINPSTGQIITSALLDRETRENY 2455
Score = 39.3 bits (90), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYY 138
G ++ VNI V D+ND +P F +V E + G + + A D DEG N +V Y
Sbjct: 910 GAVTGDTIVNITVKDLNDNSPHFIHAVESVNVVENWKAGHTIFQAKALDPDEGVNGMVLY 969
Query: 139 SVPEDIP--FVVDANTGDIRTNKALD 162
S+ ++ F ++ TG I LD
Sbjct: 970 SLKQNPKGLFSINEQTGAISLIGQLD 995
Score = 38.9 bits (89), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 69/169 (40%), Gaps = 26/169 (15%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQ 73
+ +G + V ATD DSG + Y + N F++ P T E Q
Sbjct: 1365 ENMRVGELVSSVTATDSDSGDNADLHYSITGTNNHGT--FSISPNTGSIFLAKKLDFETQ 1422
Query: 74 G------PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVH 124
+D+G SST +V I V D ND P F + S+ E G +V V
Sbjct: 1423 SLYKLNITAKDQGRPPRSSTMSVVIYVRDFNDNPPNFPAGDIFKSIIENIPVGSSVISVT 1482
Query: 125 ATDADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
A D+D N + Y++ + P F +D G I TN +D E L+
Sbjct: 1483 ANDSDADINGQLTYAIIQQTPRGNHFRIDEVRGTIFTNAEIDREFANLF 1531
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 67/174 (38%), Gaps = 20/174 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G V+Y + +T + LD
Sbjct: 733 YFAHIQENEPAGTYVTTVSATDPDMGPNGTVKYSISAGDTSRFQVHSKTGIITTKIALDR 792
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V I V D D P F Y F V E G VG
Sbjct: 793 EERTAYQLQVVATDGGHLQSQNQAIVTITVLDTQDNPPVFNQGMYGFVVFENVALGYHVG 852
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A+ D N + Y D F ++ TG I T +D E+Q Y +V
Sbjct: 853 TVFASTMDLNTN-ISYLITTGDQRGMFAINRVTGQITTASIIDREEQAFYQLKV 905
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
+STA V+I + D+ND P F S P +PE V + ATD D G N+ + YS+
Sbjct: 2071 TSTAQVSIILLDVNDSPPSFIS-PKLTYIPENTPIDTVVFKAQATDPDSGPNSYIEYSLL 2129
Query: 141 -PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
P F + G++R LD E Y V K
Sbjct: 2130 RPLGNKFSIGTIDGEVRLIGELDREAVSNYTLTVVATDK 2168
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD-------PATEHQGP------- 75
G + V TD D+G + Y L+ N A F++D A E G
Sbjct: 2506 GSFVFAVTVTDADTGSNAELHYSLVGKN---AEKFHIDSARGAILAANELAGESEVTISV 2562
Query: 76 -IQDEGGLSSTATVNIRVTDINDKN-PEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
++D G T + + V ++ P+ Q+ F+ PE Q G V + + A G
Sbjct: 2563 HVRDGGRYPKTDSTTVTVRFVSRAEFPQVQAEQETFTFPENQAVGTLVTTISGSSARGG- 2621
Query: 133 NAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYL 170
++ YY ++ F+VD TG + +ALD+E Q Y+
Sbjct: 2622 -SLSYYIASGNLGNTFIVDQVTGQLSVGQALDFEAIQKYV 2660
Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 63/159 (39%), Gaps = 29/159 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD--------------------- 67
+G +++ V A D D+ G + Y ++ T ++F +D
Sbjct: 1474 VGSSVISVTANDSDADINGQLTYAII-QQTPRGNHFRIDEVRGTIFTNAEIDREFANLFE 1532
Query: 68 ---PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVH 124
AT+ P+ E + V I V D ND P F S + P G + +
Sbjct: 1533 LTVKATDQAVPV--ESRRFALKNVTILVMDQNDNVPVFISQNALAADPSVMIGSVLTTII 1590
Query: 125 ATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKAL 161
A D DEG N V Y + + F+VD +GD+R AL
Sbjct: 1591 AADPDEGANGEVEYEIINGDTKTFIVDRYSGDLRVASAL 1629
>gi|71891737|dbj|BAA13407.2| KIAA0279 protein [Homo sapiens]
Length = 2854
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 85/181 (46%), Gaps = 26/181 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS-YFNLDPAT---EHQG 74
Y R+ E+G ++ V+ATD D+ + YRLL+ + + S F +DP + +G
Sbjct: 225 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRSGVIRTRG 284
Query: 75 PI------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D G S+TA V + V D ND P+F Y V E
Sbjct: 285 PVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYVVQVREDVT 344
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLER 172
G V RV A+D D+G NAVV+YS+ F +DA TG + LDYE + Y R
Sbjct: 345 PGAPVLRVTASDRDKGSNAVVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLR 404
Query: 173 V 173
V
Sbjct: 405 V 405
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LD 67
Y R+ G +++V A+D+D G +V Y ++ N Y + LD
Sbjct: 335 YVVQVREDVTPGAPVLRVTASDRDKGSNAVVHYSIMSGNARGQFYLDAQTGALDVVSPLD 394
Query: 68 PATEHQGPIQ---DEGG---LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
T + ++ +GG LS+ + V ++V DIND P F S P++ +V E G
Sbjct: 395 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 454
Query: 120 VGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V A DAD G NA + Y V D PF ++ TG I LD E+ Y
Sbjct: 455 VLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFY 507
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------------AASYFNLDPATEHQ-- 73
+G +++ V A D+D+ ++ Y++ NT + LD E Q
Sbjct: 556 VGTSVVTVSAVDRDA--HSVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYV 613
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G TA + + VTD N P FQS Y +V E + G V + ATD D G
Sbjct: 614 LAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 673
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + IP F +DA+TG + T LDYE Q Y
Sbjct: 674 ENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSY 712
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 33/181 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPATE---- 71
Y A + G + ++A D D G+ G +EY L D+ ++ +F+LDP T
Sbjct: 117 YQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSN--QFFSLDPVTGAVTT 174
Query: 72 -------------HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ QD G S+ AT+ I VTD ND +P F+ Y+ S+ E +
Sbjct: 175 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 234
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV-------PEDIPFVVDANTGDIRTNKALDYEKQQL 168
G V V ATD D NA + Y + P ++ F +D +G IRT +D E+ +
Sbjct: 235 VGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEV-FEIDPRSGVIRTRGPVDREEVES 293
Query: 169 Y 169
Y
Sbjct: 294 Y 294
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLDPATEHQGPIQD- 78
+++Q+ ATD+DSG G V Y + + LD Q ++
Sbjct: 764 SVLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAY 823
Query: 79 --EGGLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
+ G+ T V + V D+ND P F+ ++ V E GLAV RV ATD DEG
Sbjct: 824 AVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGT 883
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 884 NAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYEDRPEYV 924
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSSTA 86
G T++ + ATD+D+G+ + Y + D+ F +D A Q + E +S T
Sbjct: 659 GTTVVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTL 714
Query: 87 TVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
+ R V D+ND P+F Y+ SV E +V ++ ATD D
Sbjct: 715 AITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRD 774
Query: 130 EGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N V+Y+ D F+V++ +G +RT + LD E Y+ R + + K
Sbjct: 775 SGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYAVDK 827
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 32/163 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G+ + +V ATD D G + Y++++ N F LD + + D
Sbjct: 867 IGLAVARVTATDPDEGTNAQIMYQIVEGNI--PEVFQLDIFSGELTALVDLDYEDRPEYV 924
Query: 79 ------EGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRV 123
L S ATV++R+ D ND P + F S P G A+GRV
Sbjct: 925 LVIQATSAPLVSRATVHVRLLDRNDNPPVLGNFEILFNNYVTNRSSSFPGG----AIGRV 980
Query: 124 HATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
A D D + + ++ V ++A+TG+++ ++ALD +
Sbjct: 981 PAHDPDISDSLTYSFERGNELSLVLLNASTGELKLSRALDNNR 1023
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 32/136 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASY-------------FN 65
LG ++ V+A D D+G +EYRL ++N T S F
Sbjct: 451 LGYLVLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFYSFG 510
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
++ A +H P L+++A+V++ V D+ND NP F Y + E G +V V
Sbjct: 511 VE-ARDHGTP-----ALTASASVSVTVLDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVS 564
Query: 125 ATDADEGQNAVVYYSV 140
A D D ++V+ Y +
Sbjct: 565 AVDRDA--HSVITYQI 578
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 100 PEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV------PEDIPFVVDANT 152
P+FQ Y+ +VPE Q G V + A D DEG+ + Y++ + F +D T
Sbjct: 110 PQFQPPSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPVT 169
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G + T + LD E + ++ RV
Sbjct: 170 GAVTTAEELDRETKSTHVFRV 190
>gi|167538373|ref|XP_001750851.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770672|gb|EDQ84355.1| predicted protein [Monosiga brevicollis MX1]
Length = 10056
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 5/126 (3%)
Query: 47 GLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLP 106
GL+ + LD +A + L ++ P D LSST+T+ I V DIND+ P F++
Sbjct: 7399 GLLLAQGLDR--EATANHTLVVTAQNTVPSTDGKILSSTSTIQIEVLDINDRIPSFEASF 7456
Query: 107 YEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS-VPEDI-PFVVDANTGDIRTNKALDY 163
Y+ +VPE + G + ++ A D D G N V YS +P+++ F +DA TG +R N +LDY
Sbjct: 7457 YDVAVPENEAIGETIEQLVAFDPDAGANGTVSYSLLPDNLTAFSIDATTGRLRVNASLDY 7516
Query: 164 EKQQLY 169
E QQ +
Sbjct: 7517 ETQQSF 7522
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 40/182 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVE-----------------YRLLDNNTDAASYF------ 64
E+G L V +D D+G FG+V +RL +N A
Sbjct: 4602 EIGTRLATVLVSDADTGAFGVVSVAIASVTFAGVDAPTNLFRLEQSNASVAVLVANGRLD 4661
Query: 65 ---------NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
+ D + + D GG+++ A++++R+TD+ND P F + Y + EG+
Sbjct: 4662 RERTIITASSNDVRVDVLLLLSDTGGVTTQASISVRLTDVNDNPPSFAAASYSVVIAEGE 4721
Query: 116 DG-LAVGRVHATDADEGQNAVVYYSVPED--IPF---VVDANTGD--IRTNKALDYEKQQ 167
G L + ATD D N + ++ ++ +PF VV T + ++ALDYE Q
Sbjct: 4722 VGPLPDLEIRATDLDRAANEALTLTLIDEASLPFSSEVVPGLTASLLLSVDRALDYEAQS 4781
Query: 168 LY 169
+
Sbjct: 4782 EW 4783
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 76 IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNA 134
+ D GL + V +RV D ND P F + Y + E D G V A DAD A
Sbjct: 8405 VSDGFGLHTIVPVTLRVVDRNDNAPVFDDIAYSCQLQEDADVGALCTAVRAVDADAMPEA 8464
Query: 135 VVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERV 173
V YS+ F V+A++G++R + LD E + Y+ V
Sbjct: 8465 RVSYSLVTSFGDTFTVNASSGEVRLSGTLDRETRDSYVLEV 8505
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDAD-EGQNAVVYYS 139
LSS A + I +TD+ND P F +VPE LA + A D+D G N+VV +
Sbjct: 1422 ALSSRANLTITLTDVNDNPPAFTHGNLSCTVPENSAPLACVTLVAWDSDGPGNNSVVRFR 1481
Query: 140 -VPEDI-PFVVDANTGDIRTNKALDYE 164
V D+ F VDA TG +R + LD E
Sbjct: 1482 LVAGDLDAFEVDALTGLVRMRRPLDAE 1508
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 20/158 (12%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNN--TDAASYFNL------DPATEHQGPIQ----DE 79
+ +QV+ATD D G+ + + + D TD + L D T ++ + D
Sbjct: 8005 SCVQVEATDLDVGENARLTWLVNDTRFATDTMGFITLQSGAVLDFETTNRVAVSVTVTDA 8064
Query: 80 G--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQ--NAV 135
G LSSTA + + +T +ND PEF ++ +V E + + + ATDAD NA+
Sbjct: 8065 GVPALSSTALLFVTITPVNDNAPEFTRHVFDCTVTENEVNASCASLSATDADANAPDNAL 8124
Query: 136 VY----YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y + VVDA +G +R + LD E Q Y
Sbjct: 8125 RYGLVSDAASSAAGAVVDAESGKVRLTRTLDRETQAEY 8162
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 15/133 (11%)
Query: 43 SGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEF 102
SG + E RL +T+ + F + H ++ V + + D ND +P F
Sbjct: 3511 SGVITVAEERLDYESTNKSWSFTVLVTDSHS---------TTRVPVTVHILDANDNSPVF 3561
Query: 103 QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTG----DIR 156
+S + G + + +DAD G+NA + YS+ +++PF V A++ D+
Sbjct: 3562 ESTRPVTVAEDAPAGSLISSILVSDADAGRNAALTYSINGSDNLPFRVQASSNASGVDLL 3621
Query: 157 TNKALDYEKQQLY 169
T ALD+E Q Y
Sbjct: 3622 TAGALDFETQASY 3634
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 75/186 (40%), Gaps = 43/186 (23%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY + +G T+ Q+ A D D+G G V Y LL +N A F++D T
Sbjct: 7456 FYDVAVPENEAIGETIEQLVAFDPDAGANGTVSYSLLPDNLTA---FSIDATTGRLRVNA 7512
Query: 71 ----EHQGPIQ------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
E Q + D G L ST V ++V D+ND P V E + L
Sbjct: 7513 SLDYETQQSFEFTVRATDAGTPPLYSTVPVRVQVLDLNDNAPVLVVNSTSLLVSE-NNAL 7571
Query: 119 AVG---RVHATDADEG--QNAVVYYSVPEDI---------------PFVVDANTGDIRTN 158
A +V ATDAD N+ V +SV ++ VD TGD+R
Sbjct: 7572 AAPIALQVMATDADAAGSANSRVRFSVTTEVLSATTGRWALANGESLVAVDVVTGDLRLQ 7631
Query: 159 KALDYE 164
LDYE
Sbjct: 7632 TVLDYE 7637
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 73/164 (44%), Gaps = 21/164 (12%)
Query: 21 AMARDKHEL---GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY-------------F 64
A+A EL G L Q+ ATD DSG FG V + LL + +
Sbjct: 3364 ALAASASELTSPGTILGQLLATDADSGSFGTVGFELLGPAVELKRFRLSATGQLQLITTL 3423
Query: 65 NLDPATEHQGPIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
+ + A EH+ + D GGL + A + V + D++P + F+V E + G +G
Sbjct: 3424 DYESAVEHRLSVNAIDGGGLITPAVYVLTVRNEPDESP-IAPVELTFNVSETAEVGHLLG 3482
Query: 122 RVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEK 165
V A D D G +++ Y +PF ++A+ + LDYE
Sbjct: 3483 SVLANDPD-GLDSLGYALSTPTVPFAINASGVITVAEERLDYES 3525
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLP---YEFSVPE--GQDGLAVGRVHATDADEGQNAVV 136
L + AT ++ VTD ND PE + P Y +PE + V V A DAD G N +
Sbjct: 8729 LCANATYDVTVTDENDNVPELINRPSAGYACQLPENTATESACVSLV-AQDADAGDNGRL 8787
Query: 137 YYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
+++ +D F + AN G + +ALD E+Q +Y
Sbjct: 8788 TFALVDDFGGRFRMGAN-GTLTVARALDRERQSVY 8821
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 67/153 (43%), Gaps = 34/153 (22%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLS--STATVNIRVTDIND 97
D +SGK L R LD T A N+ + D G + + AT+ + V D ND
Sbjct: 8142 DAESGKVRLT--RTLDRETQAEYTLNVS--------VHDLGMPTRWAYATLILTVDDAND 8191
Query: 98 KNPEFQSLPYEFSVPEGQDGLAVGR------VHATDADEGQNAVVYYSVPE--DIPFVVD 149
P+F ++P S+ E VG+ V ATD D G +AV+ YS+ D F ++
Sbjct: 8192 NGPKFSAVP-SCSLWEANGREPVGQQQACPAVAATDDDVGWHAVIEYSLDSTFDGLFWIE 8250
Query: 150 ANTGDIRTN-------------KALDYEKQQLY 169
++G + TN K LD E Q Y
Sbjct: 8251 PDSGIVYTNTTRQTQGGNDAGMKQLDREAQATY 8283
Score = 39.7 bits (91), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 96 NDKNPEFQSLPYEFSVPEGQDGLAVG-RVHATDADEGQNAVVYYSVPED--IPFVVDANT 152
ND P F Y+F V E D V V ATDAD G + V Y + D + +V+D T
Sbjct: 6904 NDFAPVFAQSLYDFQVNEAADPTQVALAVAATDADPGPHGRVSYKIQPDTVVDWVID-ET 6962
Query: 153 GDIRTNKALDYEKQQLY 169
G +R + LD E+ Y
Sbjct: 6963 GVLRPTRGLDRERVAQY 6979
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 76/185 (41%), Gaps = 27/185 (14%)
Query: 3 PCPIPSALE-MTSDSLFYGAMARDKHELGV-------TLMQVKATDKDSGKFGLVEYR-- 52
P I S E T+++L A D E G TL ATD + G V
Sbjct: 7773 PSYICSVFENATANTLCVLVNASDGDEPGTPRAAIDYTLTGTGATDFTIDRLGAVTVAAT 7832
Query: 53 -LLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
+L+ + A N+ AT+ P + SS + I + D N P F S P
Sbjct: 7833 GVLNRDERAVYRLNVT-ATDRGSPPR-----SSLTNLLISILDSNTHAPVFTSSPSVHVS 7886
Query: 112 PEGQDG-LAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYE 164
G V +V ATDAD G NA+++YS+ +P F +DA TG + LD E
Sbjct: 7887 EAATVGPTPVFQVVATDADLGSNALLHYSL---LPGNGAESFTLDAQTGQLFVASPLDRE 7943
Query: 165 KQQLY 169
+ Y
Sbjct: 7944 ARDAY 7948
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA----VGRVHATDADEGQNAVVYY---S 139
++ + V D+ND+ P + S + VPEG L+ VGRV A D D + +
Sbjct: 3653 SIQVLVLDVNDEAPVWTSANTLY-VPEGAANLSSPRLVGRVTAVDPDSPDLTFAFVGGEA 3711
Query: 140 VPEDIPFVVDANTGDIRTNKALDYE 164
+ F +D+ +G+I ALDYE
Sbjct: 3712 CNASMAFALDSASGNISAFAALDYE 3736
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 58/133 (43%), Gaps = 15/133 (11%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIND 97
+ D ++G L RLLD T+A L AT+H P LS A+V + V D+ND
Sbjct: 8587 SVDNETGVLTL--QRLLDFETEAFLTLTL-VATDHGQP-----RLSGRASVAVNVIDVND 8638
Query: 98 KNPEFQSLPYEFSVPEGQDGL----AVGRVHATDADEGQNAVVYYSVPEDIP--FVVDAN 151
P F S P V L AV RV +DA ++ + Y + F VDA
Sbjct: 8639 NAPVFAS-PNPVCVLSESAALGTRCAVVRVTDSDAPGTAHSNISYRLAAATADHFRVDAR 8697
Query: 152 TGDIRTNKALDYE 164
TG + LD E
Sbjct: 8698 TGQLILRSLLDRE 8710
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 18/89 (20%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------------- 77
V+L V+A+D+D+G FG + Y ++ +A F+LD A+ +Q
Sbjct: 3070 VSLATVRASDEDTGAFGKLSYT-MEVAPNATVPFSLDAASGELTLVQQVRYHEQASFSFH 3128
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEF 102
D G ++ V +RV+D+ND P F
Sbjct: 3129 ILASDGGQRTARLPVTVRVSDVNDHAPVF 3157
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV---- 140
AT IR+TD+ND P + + S E G +G++ ATDAD G V + +
Sbjct: 3344 ATATIRLTDVNDNAPVWNTTALAASASELTSPGTILGQLLATDADSGSFGTVGFELLGPA 3403
Query: 141 PEDIPFVVDANTGDIRTNKALDYEK 165
E F + A TG ++ LDYE
Sbjct: 3404 VELKRFRLSA-TGQLQLITTLDYES 3427
Score = 36.2 bits (82), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 26/167 (15%)
Query: 23 ARDKHEL---GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LDP 68
+R+ EL G V A+D D G FG +E L +N D A N LD
Sbjct: 1553 SRELSELVPVGTIYANVTASDADVGIFGALELALHTSNPDPALSLNDDGTALIIRRVLDF 1612
Query: 69 AT------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA--V 120
T ++ ++D GG +++ + + V D ND NP S P + ++ E + V
Sbjct: 1613 ETVDRQRQRYELFVRDGGGRNTSVSFELTVLDAND-NPPVISAPDDVTLTEDNSLVPRLV 1671
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFV---VDANTGDIRTNKALDYE 164
V A+DAD + + + + + FV + A + ++ LD E
Sbjct: 1672 ATVSASDADSFEGDMQFLVIAPPLGFVFSRISAVSATLQAAAPLDRE 1718
>gi|348504574|ref|XP_003439836.1| PREDICTED: cadherin-24-like [Oreochromis niloticus]
Length = 1178
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 85/179 (47%), Gaps = 29/179 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y AM + +G +++QV A D D +G RL+ T +F++DP T
Sbjct: 211 YVAMVPEMANIGTSIIQVTARDADDPTYG-NSARLVYAITHGQDFFSVDPQTGILRTAVP 269
Query: 71 EHQGPIQDE--------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
+ QDE GGLS T TV +R++D+ND P F+ + FSV E
Sbjct: 270 DMDRETQDEYLVVLQAKDMGGHLGGLSGTTTVTVRLSDVNDNPPHFRRSAWSFSVSELAA 329
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGD--IRTNKALDYEKQQLY 169
G+ VGR+ ATD D G+NA + +++ E F V + I NK LDYE + Y
Sbjct: 330 PGVEVGRLTATDPDLGENAQLEFTILDTEEAEIFNVTRRDKEAVIVLNKILDYETRNSY 388
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 79/179 (44%), Gaps = 48/179 (26%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL----------------------- 66
GV + ++ ATD D G+ +E+ +LD T+ A FN+
Sbjct: 331 GVEVGRLTATDPDLGENAQLEFTILD--TEEAEIFNVTRRDKEAVIVLNKILDYETRNSY 388
Query: 67 -----------DPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
DP +GP +D+ ATV + V + D+ P F Y V E
Sbjct: 389 TFSVEVTNPIVDPRYIRKGPFKDQ------ATVRVMVLNA-DEPPRFSQALYHLDVSENC 441
Query: 116 DGL-AVGRVHATDADEGQNAVVYYSV-PEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ +VGRV+A D D GQ+ + YS+ P+ P F + ++TG I T LD E++Q +
Sbjct: 442 PPVCSVGRVYAVDPDTGQSTNIRYSIDPQSDPEALFRIASDTGFINTVMELDREQEQWH 500
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 63/128 (49%), Gaps = 24/128 (18%)
Query: 50 EYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF 109
EYRL+ TD + L+P++E IRV DIND P F S PY
Sbjct: 170 EYRLVATATDRETGRALEPSSE----------------FIIRVQDINDNPPVFPSEPYVA 213
Query: 110 SVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVP--EDIPFVVDANTGDIRTNKA-LD 162
VPE + G ++ +V A DAD+ G +A + Y++ +D F VD TG +RT +D
Sbjct: 214 MVPEMANIGTSIIQVTARDADDPTYGNSARLVYAITHGQDF-FSVDPQTGILRTAVPDMD 272
Query: 163 YEKQQLYL 170
E Q YL
Sbjct: 273 RETQDEYL 280
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
G + + +GR+H TD D+G + Y E + FV+D+ TG+I K+LD E++ Y
Sbjct: 115 GPEPVLIGRLH-TDMDKGDGSTKYMLEGEGVGSVFVIDSKTGNIHVTKSLDREEKDEY 171
>gi|301607154|ref|XP_002933176.1| PREDICTED: cadherin-12-like [Xenopus (Silurana) tropicalis]
Length = 766
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 87/185 (47%), Gaps = 31/185 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G ++QVKATD D +G R++ + YF++DP T
Sbjct: 138 YVASVPEMSPVGAYVLQVKATDADDPTYG-SSARVVYSILQGQPYFSIDPKTGVIRTALP 196
Query: 71 --------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
++Q IQ + GGL+ T TVNI +TD+ND P F + VPE
Sbjct: 197 NMDREVKEQYQVLIQAKDMGGQLGGLAGTTTVNITLTDVNDNPPRFPKSIFHLKVPEASP 256
Query: 117 -GLAVGRVHATDADEGQNAVVYYS-VPEDIPFVVDANTGD------IRTNKALDYEKQQL 168
G +G++ A D D G+NA + YS VP D + D T D I K LD+E ++
Sbjct: 257 VGSPIGKIRAVDPDFGRNAEIEYSIVPGDGGNLFDIKTDDDTQEGIIFLIKPLDFETKKA 316
Query: 169 YLERV 173
Y +V
Sbjct: 317 YTFKV 321
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY SVPE G V +V ATDAD+ G +A V YS+ + P
Sbjct: 121 IKVQDINDNEPKFLDGPYVASVPEMSPVGAYVLQVKATDADDPTYGSSARVVYSILQGQP 180
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F +D TG IRT +D E ++ Y
Sbjct: 181 YFSIDPKTGVIRTALPNMDREVKEQY 206
Score = 42.4 bits (98), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 59/140 (42%), Gaps = 7/140 (5%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH-QGPIQDEGGLSSTATV 88
G L +K TD D+ + + + LD T A F ++ H G ATV
Sbjct: 286 GGNLFDIK-TDDDTQEGIIFLIKPLDFETKKAYTFKVEATNVHLDHRFNSVGPFKDIATV 344
Query: 89 NIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYY---SVPEDI 144
I V D+ D+ P F Y V E G +G V A D D G + + Y D
Sbjct: 345 KINVLDV-DEPPVFSKPFYTMEVYEDTPTGTIIGAVTAQDLDIGTSPIQYSIDAQTDADN 403
Query: 145 PFVVDANTGDIRTNKALDYE 164
FVVDAN G + TN LD E
Sbjct: 404 NFVVDANEGTVATNALLDRE 423
>gi|301781314|ref|XP_002926069.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3-like [Ailuropoda melanoleuca]
Length = 4091
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 85/176 (48%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGP 75
Y A R+ +++V ATD+D GLV Y ++ N+ +F +D T + P
Sbjct: 565 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRG--HFAIDSLTGEIQVVAP 622
Query: 76 I--------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ QD G ++T +I+V DIND P F S P++ SV E G
Sbjct: 623 LDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLENAPLG 682
Query: 118 LAVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+V + A DAD G+NA + YS V D+PFV+++ TG + + LD E + Y
Sbjct: 683 HSVIHIQAVDADHGENARLEYSLTGVAPDMPFVINSATGWVSVSGPLDRESVEHYF 738
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQG 74
+++Q+ ATD+D+ G V+Y N D F ++P + E
Sbjct: 994 SVLQISATDRDAHANGRVQY-TFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTA 1052
Query: 75 PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G L + ++ + V D+ND P F + +E V E G V ++ A D DEG
Sbjct: 1053 YAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDEG 1112
Query: 132 QNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE +Q Y+
Sbjct: 1113 PNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYV 1154
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 84/185 (45%), Gaps = 32/185 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPAT----- 70
Y R+ E G ++Q++ATD D+ + YR + A++ F +DP +
Sbjct: 453 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARAAASAAFEIDPRSGLIST 512
Query: 71 ------EH------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH QG Q+ G S+T V+I V D ND P+F Y V
Sbjct: 513 SGRVDREHMESYELVVEASDQG--QEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVR 570
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E + V RV ATD D+ N +V+Y++ F +D+ TG+I+ LD+E ++
Sbjct: 571 EDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVVAPLDFEAERE 630
Query: 169 YLERV 173
Y R+
Sbjct: 631 YALRI 635
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V+I +TD N P FQS Y +V E + G V + A+D D G+NA + Y + +++P
Sbjct: 859 VHINITDANTHRPVFQSAHYSVNVNEDRPVGSTVVVISASDDDVGENARITYLLEDNLPQ 918
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F ++A++G I LDYE Q Y
Sbjct: 919 FRINADSGAITLQAPLDYEDQVTY 942
Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 72/181 (39%), Gaps = 34/181 (18%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN------NTDAASYFNLDPA 69
S Y + +G T++ + A+D D G+ + Y L DN N D+ A
Sbjct: 875 SAHYSVNVNEDRPVGSTVVVISASDDDVGENARITYLLEDNLPQFRINADSG-------A 927
Query: 70 TEHQGPIQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPE 113
Q P+ E ++ T + R V D+ND P+F + Y V E
Sbjct: 928 ITLQAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSE 987
Query: 114 GQDGL-AVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQL 168
+V ++ ATD D N V Y+ D F ++ +G +RT + LD E +
Sbjct: 988 DAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPV 1047
Query: 169 Y 169
Y
Sbjct: 1048 Y 1048
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
+S + V R N ++P+F Y+ VPE + G AV RV A D D G+ + YS+
Sbjct: 322 ISPASRVRRRRCAAN-RHPQFPQYNYQALVPENEVAGTAVLRVAAQDPDAGEAGRLVYSL 380
Query: 141 PEDIP------FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ F +D +G IRT ALD E + + RV
Sbjct: 381 AALMNSRSLELFSIDPLSGLIRTEAALDRESMERHYLRV 419
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 71/178 (39%), Gaps = 32/178 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGPI--------- 76
LG +++ ++A D D G+ +EY L D F ++ AT GP+
Sbjct: 681 LGHSVIHIQAVDADHGENARLEYSLTGVAPDMP--FVINSATGWVSVSGPLDRESVEHYF 738
Query: 77 -----QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR--VHATD 127
+D G LS++A+V + V D+ND PEF Y + E AVG V T
Sbjct: 739 FGVEARDHGIPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDA---AVGTTVVSVTA 795
Query: 128 ADEGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
D N+ + Y + G + LDY KQ+ Y + V S A
Sbjct: 796 VDRDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLDY-KQERYFKLVLTASDRA 852
Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 66/161 (40%), Gaps = 28/161 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPI- 76
+G + Q+ A D D G + Y++++ N + + +LD + I
Sbjct: 1097 VGSVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIV 1156
Query: 77 --QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRVHA 125
L S ATV++R+ D ND +P + F + P G +GR+ A
Sbjct: 1157 VQATSAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSG----VIGRIPA 1212
Query: 126 TDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
D D + + ++ VV+ +G++R ++ LD +
Sbjct: 1213 YDPDVSDHLFYSFERGNELQLLVVNQTSGELRLSRKLDNNR 1253
>gi|301756110|ref|XP_002913894.1| PREDICTED: protocadherin-23-like [Ailuropoda melanoleuca]
Length = 3357
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 78/172 (45%), Gaps = 30/172 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD--NNTDAASYFNLDPATEHQGPI 76
Y A + +G +QVKA+D D+G +G VEY L D + DA+ F +DP H G I
Sbjct: 655 YNATLAEHAPVGHCFLQVKASDADAGLYGFVEYSLYDGFQSYDASPAFQIDP---HDGRI 711
Query: 77 ---------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EG 114
+D GGLS+ A V + + D+ND P F Y S+ +
Sbjct: 712 CVSQDIDRERDPATYDLLVKAKDGGGLSAQAFVRVEMEDVNDNEPVFNPSTYVMSISGQT 771
Query: 115 QDGLAVGRVHATDADEG-QNAVVYYSVPEDIP--FVVDANTGDIRTNKALDY 163
Q G + V ATD D G V Y +P D+ F +D+ TG I L +
Sbjct: 772 QPGTEIINVLATDRDSGIYGTVAYELIPGDLSSLFTIDSTTGIIYLTSTLSH 823
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 80/162 (49%), Gaps = 31/162 (19%)
Query: 35 QVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ------ 77
++ A D+DSGK G + Y LL + +F ++P T E QG Q
Sbjct: 1199 KITAIDRDSGKNGQLSYFLLSD----GKFFKMNPNTGEFISWVALDHELQGHHQVTVLVT 1254
Query: 78 DEGGLSSTAT--VNIRVTDINDKNPEF-QSLPYE---FSVPEGQD-GLAVGRVHATDADE 130
D G AT V + VTD+ND +P F Q LP E V EGQ + V V A D DE
Sbjct: 1255 DHGSPPRNATMVVYVSVTDVNDNSPYFPQCLPGEELHVKVLEGQPVNMLVTTVFAKDFDE 1314
Query: 131 GQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
G NA V YSV + F +DAN+G+IRT L Y+++ Y
Sbjct: 1315 GNNAEVVYSVSSEDSSDHFKIDANSGEIRTTTILSYDRRPSY 1356
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 31/184 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
F A ++ +G + + A D D G+ G V Y ++ N + A F LD ++
Sbjct: 1610 FPIAHIKEDATVGSLVHHISAQDPDEGRNGRVTYSIISGNENMA--FMLDKSSGLLTTTC 1667
Query: 71 --EHQGPIQ--------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+++ Q D+G LSS+ T+ I V D+ND+ P FQ YE SV E Q+ G
Sbjct: 1668 PLDYEIKAQHILTLLALDDGIPALSSSQTLTITVLDVNDEAPVFQQKLYEASVKENQNPG 1727
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLE 171
V RV A D D G N+ + + +P F ++ +TG + T ALD E ++++
Sbjct: 1728 QFVTRVEAMDRDSGINSKFQFEI---MPGASSGFFKINPDTGVVVTTTALDREVREVFSL 1784
Query: 172 RVFL 175
RV +
Sbjct: 1785 RVLV 1788
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL-- 82
+ E GV + V A+D D+G G V YR++D NTD YF ++ E G + L
Sbjct: 1827 ENQEPGV-VYTVLASDMDAGNNGAVRYRVIDGNTDG--YFAIN---ETSGELSTTHALDR 1880
Query: 83 --------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
+S + +RV D ND P F +L Y+ SV E Q G V
Sbjct: 1881 EQISNFTLVILCSDLGDPPRTSLVQLQVRVLDDNDHGPSFPTLLYQASVREDAQVGTVVL 1940
Query: 122 RVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLER 172
+ A D DEG N Y + ++ F +DA G +RT LD E + ++ R
Sbjct: 1941 VLSAMDRDEGLNGQTEYFLVDETSGAFTIDAVAGTLRTRHTLDREARSQHMFR 1993
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 25/178 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA-----T 70
+L Y A R+ ++G ++ + A D+D G G EY L+D + A F +D T
Sbjct: 1922 TLLYQASVREDAQVGTVVLVLSAMDRDEGLNGQTEYFLVDETSGA---FTIDAVAGTLRT 1978
Query: 71 EH------------QGPIQD---EGGLSSTATVNIRVTDINDKNPEFQSLPYE-FSVPEG 114
H + +D +G S+T + + V D+ND +P + P+E F P+
Sbjct: 1979 RHTLDREARSQHMFRAAARDRSVQGSRSTTVIIKVHVMDVNDNDPVWGQNPFEIFLFPQS 2038
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLE 171
+ A+D D G N V +S E F +D TG++R E ++L+
Sbjct: 2039 PTNQTTAVLTASDPDLGPNGTVIFSFAETQSMFSIDKYTGEVRLQHCPSSEYFPIWLQ 2096
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 76/184 (41%), Gaps = 32/184 (17%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQ-- 73
SL Y A ++ LG + V ATD+D G + Y ++ N +F+L+ T
Sbjct: 2654 SLKYHAHVKESTPLGSHITVVSATDRDVGSHAEIIYHIISGNEKG--HFHLEETTGVLYL 2711
Query: 74 -GPIQDEGGLSSTATVN---------------IRVTDINDKNPEFQSLPYEFSVPEGQDG 117
P+ E T TV I V D ND P+F +VPE
Sbjct: 2712 IKPLDYEETTKFTLTVQASDEEKKHFSFTVVFINVLDDNDHAPQFMFSSLTCAVPENVPV 2771
Query: 118 LA-VGRVHATDADEGQNAVVYYSV----------PEDI-PFVVDANTGDIRTNKALDYEK 165
+ V V A+D+D G + YSV P D PF++D TGDI T + LDYE
Sbjct: 2772 FSTVCSVRASDSDAGPYGELVYSVVSPCSVTHGLPRDRDPFLIDPLTGDIHTQQVLDYEN 2831
Query: 166 QQLY 169
Y
Sbjct: 2832 DSKY 2835
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 77/170 (45%), Gaps = 24/170 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A ++ G + +V+A D+DSG ++ ++ + + +F ++P T
Sbjct: 1715 LYEASVKENQNPGQFVTRVEAMDRDSGINSKFQFEIMPGAS--SGFFKINPDTGVVVTTT 1772
Query: 71 ----------EHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
+ ++D G LSSTAT+ V D ND PE ++ V E Q+
Sbjct: 1773 ALDREVREVFSLRVLVRDGGVPSLSSTATILCTVEDENDHAPEIIVPGHDIEVLENQEPG 1832
Query: 119 AVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEK 165
V V A+D D G N V Y V + D F ++ +G++ T ALD E+
Sbjct: 1833 VVYTVLASDMDAGNNGAVRYRVIDGNTDGYFAINETSGELSTTHALDREQ 1882
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 49 VEYRLLDNNTD---AASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSL 105
V Y +L ++ D AAS+ + A++H P LSSTATV I V D+ND P+F SL
Sbjct: 2601 VGYLVLLHSLDREAAASHKLVILASDHGFP-----PLSSTATVAIEVLDVNDNPPKFHSL 2655
Query: 106 PYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL 161
Y V E G + V ATD D G +A + Y + E F ++ TG + K L
Sbjct: 2656 KYHAHVKESTPLGSHITVVSATDRDVGSHAEIIYHIISGNEKGHFHLEETTGVLYLIKPL 2715
Query: 162 DYEK 165
DYE+
Sbjct: 2716 DYEE 2719
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 23/158 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAA-------------SYFNLDPATEHQGPIQ-- 77
++QV A D DSG GL EY +L N A + + + + + +Q
Sbjct: 2248 IIQVFAADPDSGMNGLPEYSILSGNQGEAFRIDTLSGVITANALLDYELTSSYSLTVQAT 2307
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNA 134
D+G LSST+ + I+VTDIND P F L + E G+ V ++ D D A
Sbjct: 2308 DKGMPRLSSTSVIKIQVTDINDNAPAFL-LSEAVEIAENSLPGVVVTQISVHDVDLNP-A 2365
Query: 135 VVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
++ E P F +D NTG + K LD+E+ Y
Sbjct: 2366 FIFNFAKESNPGTKFAIDRNTGTVVLVKTLDFEEASEY 2403
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 89 NIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---PEDIP 145
+ + DIND +P F S P + G V + A D DEG+N V YS+ E++
Sbjct: 1594 KVVILDINDHSPTFMSFPIAHIKEDATVGSLVHHISAQDPDEGRNGRVTYSIISGNENMA 1653
Query: 146 FVVDANTGDIRTNKALDYEKQQLYL 170
F++D ++G + T LDYE + ++
Sbjct: 1654 FMLDKSSGLLTTTCPLDYEIKAQHI 1678
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 68/162 (41%), Gaps = 30/162 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G ++ V ATD+DSG +G V Y L+ D +S F +D T G I
Sbjct: 774 GTEIINVLATDRDSGIYGTVAYELIPG--DLSSLFTIDSTT---GIIYLTSTLSHLESTT 828
Query: 77 -------QDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHAT 126
+D GGL+S A + I + EF+ Y FSV E + VG V A
Sbjct: 829 LLLMVCARDGGGLTSVVNADITIHILQTTLAPAEFERPKYTFSVYEDVPEDSPVGTVKAK 888
Query: 127 DADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQ 166
++ + Y D+ F + G IRT K LD+E Q
Sbjct: 889 ESLNSSEPIFYRISSGDLDRKFSIHPWLGVIRTQKPLDHETQ 930
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 25/149 (16%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASY------FNLDPATE--HQGPI------- 76
T+ V+A+D D+G +G + Y ++ + F +DP T H +
Sbjct: 2774 TVCSVRASDSDAGPYGELVYSVVSPCSVTHGLPRDRDPFLIDPLTGDIHTQQVLDYENDS 2833
Query: 77 --------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATD 127
+D+G ++T V + + I++ P F Y F++PE +GRV A+D
Sbjct: 2834 KYCLTVQAKDKGDSTATLMVWLDIEGIDEFEPIFTQEEYFFNLPEKNKARELIGRVEASD 2893
Query: 128 ADEGQNAVVYYSVPEDIP-FVVDANTGDI 155
AD G + VV YS+ P F+V+ G+I
Sbjct: 2894 ADAGMDGVVLYSLETPSPFFLVNKTNGNI 2922
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 20/125 (16%)
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
AT+ P LS+ T+ +RV D+ND+ P F Y SV E G AV V A+D
Sbjct: 496 ATDAGSPXXXSPPLSTEETLLLRVADLNDQPPVFSREHYLASVSEAAAPGTAVVWVSASD 555
Query: 128 ADEG-------QNAVVYYSV---PEDI---------PFVVDANTGDIRTNKALDYEKQQL 168
ADE + A+V+ +V PE + F +D +G I T ++LD E Q+
Sbjct: 556 ADEAGTDHARLRYALVHLTVRCNPEGVWPSAAECGPSFTIDPESGMISTFRSLDREVQEA 615
Query: 169 YLERV 173
RV
Sbjct: 616 VELRV 620
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPE 142
S+ VNI V D+ND +P F E +P+ G A+ A D D G+N + Y++
Sbjct: 948 SSTEVNITVIDVNDNHPVFPKASDEIQIPQTTFPGTALYLARAQDKDSGKNGFIRYTIAS 1007
Query: 143 DIP--FVVDANTGDIRTNKAL 161
P F +D+ G + N++L
Sbjct: 1008 QNPSIFAIDSGLGAVYLNESL 1028
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 56/132 (42%), Gaps = 20/132 (15%)
Query: 48 LVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPY 107
LV + LD AA +++ G ++ V +RV D ND P F+ Y
Sbjct: 243 LVLLQRLDREAAAAHELHIEAWARRTGHLR----------VELRVLDENDNPPVFEQSEY 292
Query: 108 EFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVP---------EDIPFVVDANTGDIRT 157
+V E + G V RV ATD D G N V YS+ + F V+ +G +R
Sbjct: 293 RAAVREDARPGAEVCRVRATDRDLGPNGHVRYSLRARQALGPLGDAAYFTVEELSGVVRV 352
Query: 158 NKALDYEKQQLY 169
+ LD E Q +
Sbjct: 353 QRPLDREAQAWH 364
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G + + V + + D+ND P F+ Y SV EGQ + +V A D D G N + YS
Sbjct: 2208 GHRAYSKVAVLIQDVNDNLPCFEQSVYHVSVSEGQFHNAPIIQVFAADPDSGMNGLPEYS 2267
Query: 140 V---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ + F +D +G I N LDYE Y
Sbjct: 2268 ILSGNQGEAFRIDTLSGVITANALLDYELTSSY 2300
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 10/88 (11%)
Query: 85 TATVNIRVTDINDKNPEFQS----LPYEFS-VPEGQDGLAVGRVHATDADEGQNAVVYYS 139
+ +V + V D ND +P F L E S VP+G +G++ A D D G+N + Y
Sbjct: 1161 STSVIVHVLDENDNSPTFLHDVLFLKVEESPVPQG----VIGKITAIDRDSGKNGQLSYF 1216
Query: 140 VPEDIPFV-VDANTGDIRTNKALDYEKQ 166
+ D F ++ NTG+ + ALD+E Q
Sbjct: 1217 LLSDGKFFKMNPNTGEFISWVALDHELQ 1244
>gi|395504722|ref|XP_003756696.1| PREDICTED: protocadherin alpha-2 [Sarcophilus harrisii]
Length = 805
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 38/165 (23%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP---------------------- 75
A+D D+G L+ YRL + + YF+LD T +
Sbjct: 157 ASDADTGSNSLLSYRL-----NPSEYFSLDVQTNEELSQSLSLVLRKALDREETSKIDLL 211
Query: 76 -IQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADE 130
I +GG L+ T + I+V D+ND PEF Y+ + E +G V +++A+DADE
Sbjct: 212 LIATDGGKPELTGTVHLRIKVLDVNDNEPEFDQTLYKVRLLENTTNGTLVIKLNASDADE 271
Query: 131 GQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
G N+ + YS D+P F +D +TG+IR LDYE+++ Y
Sbjct: 272 GLNSEITYSFSSDVPLTVHNKFKIDPSTGEIRIKGELDYEEEKSY 316
Score = 35.8 bits (81), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 26/170 (15%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA----- 69
DS + +A D L L+ ++ G+ L Y + ++++ + L P
Sbjct: 471 DSHIFTLLASDPDALENALISYFLVEQQVGERPLSSY--VSVHSESGKVYALQPLDHEEL 528
Query: 70 --TEHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD--------G 117
+ Q +D G L + ++ + V D ND P LP V + + G
Sbjct: 529 ELLQFQVSARDAGFPPLVTNVSLQVFVLDENDNAPVV--LPPHTGVNQVTELVSQSVAVG 586
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDI-----PFVVDANTGDIRTNKALD 162
V +V A DAD G NA + Y + ++ PF V TG+I T +AL+
Sbjct: 587 HVVAKVRAVDADSGYNAWLCYEMQPEMGAGRSPFRVGLYTGEISTTRALE 636
>gi|432891560|ref|XP_004075584.1| PREDICTED: protocadherin-16-like [Oryzias latipes]
Length = 3188
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 83/178 (46%), Gaps = 31/178 (17%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI 76
L+Y + E + L ++ATD D+G G + YR+ D + F+LD H G +
Sbjct: 1696 LYYNVEVPENQE-ALPLFTLRATDPDAGSSGEINYRIAAG--DPSGDFHLD---RHSGVL 1749
Query: 77 --------------------QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
QD+G LSST+TV + V DIND +P+FQS Y + EG
Sbjct: 1750 STSRPLDREKTAGYSLTIVAQDQGRPSLSSTSTVKVAVLDINDNSPQFQSNSYTADISEG 1809
Query: 115 QD-GLAVGRVHATDADEGQNAVVYY--SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G V V A DAD G N+ V Y S FV+D NTG I T LD E+ Y
Sbjct: 1810 VPIGSLVLEVKARDADFGPNSQVMYFLSRGSKSMFVIDENTGRIITAAPLDRERTASY 1867
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 77/168 (45%), Gaps = 26/168 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASY-----------FNLD 67
+G ++ V A D D G+ G V YR+ L++NT + S FNL
Sbjct: 1501 MGFVVLFVIARDADQGENGRVTYRIQSGNTRGTFSLNSNTGSLSISKPLDREEQDVFNLT 1560
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
E G Q SS+ + I V D+ND+ P F+ YE + E Q G V V A+
Sbjct: 1561 IVAEDHGIPQH----SSSQLLRIHVIDVNDETPLFEEAQYEAQISENQPAGTTVLTVSAS 1616
Query: 127 DADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
D+D+G N + Y F +++ TG I T K+LD E Q Y V+
Sbjct: 1617 DSDQGINGQITYGGISHGAFSINSVTGVITTTKSLDRESQDCYTVTVY 1664
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 74/162 (45%), Gaps = 26/162 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------EHQGP-- 75
G ++QV A DKD G G + Y +L + + S+F++D T ++ P
Sbjct: 476 GSFVLQVTARDKDQGPNGDISYSILKDQSVYHSWFSIDSVTGIITTSSQLDYEKNPNPSI 535
Query: 76 --IQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
+ +GG LSSTA VNI + DIND P F+ Y S+ E G + V A DAD
Sbjct: 536 TVVASDGGNPPLSSTAVVNILLQDINDNEPVFERNFYNVSIKENTAPGTCILEVTAVDAD 595
Query: 130 EGQNAVVYYSVPE------DIPFVVDANTGDIRTNKALDYEK 165
G V YS+ F + TG I TN LD ++
Sbjct: 596 GGTFGSVTYSLASGSNIAISSQFTIGKETGQICTNAVLDRDQ 637
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 77/167 (46%), Gaps = 23/167 (13%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT------ 70
FY ++ G +++V A D D G FG V Y L +N +S F + T
Sbjct: 571 FYNVSIKENTAPGTCILEVTAVDADGGTFGSVTYSLASGSNIAISSQFTIGKETGQICTN 630
Query: 71 ----EHQGP--------IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDG 117
QGP D GGLSS A V + + DIND P F L Y ++ + G
Sbjct: 631 AVLDRDQGPDSFDFTVMAVDGGGLSSEAYVRVDLEDINDNRPAFYPLGYAVNLSTQSAPG 690
Query: 118 LAVGRVHATDADEGQNA-VVYYSVP-EDIP-FVVDANTGDIRTNKAL 161
V +V A D D G+N + Y +VP D P F ++ +TG I ++++
Sbjct: 691 TYVAKVMAYDPDLGENGRITYKTVPGGDSPYFTLNKDTGVISLSRSI 737
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 17/168 (10%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF--------NLDPAT 70
Y A + G T++ V A+D D G G + Y + + + + +LD +
Sbjct: 1596 YEAQISENQPAGTTVLTVSASDSDQGINGQITYGGISHGAFSINSVTGVITTTKSLDRES 1655
Query: 71 EHQGPIQ---DEGGLS---STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVH 124
+ + +GGL + ATV I+V D+ND P F L Y VPE Q+ L + +
Sbjct: 1656 QDCYTVTVYAKDGGLPPNYAKATVKIKVVDVNDNAPIFGRLYYNVEVPENQEALPLFTLR 1715
Query: 125 ATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
ATD D G + + Y + P F +D ++G + T++ LD EK Y
Sbjct: 1716 ATDPDAGSSGEINYRIAAGDPSGDFHLDRHSGVLSTSRPLDREKTAGY 1763
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 70/144 (48%), Gaps = 21/144 (14%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDN-----------------NTDAASYFNLDPATEHQ 73
VT++ A D+D G FG++ Y +LD+ T +A F +
Sbjct: 2619 VTILH--AIDQDRGAFGMLTYHMLDSPKEGVEGILINQTSGEVRTRSAFDFEKKNSFHFV 2676
Query: 74 GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQ 132
D G S+T TV + +T ++ +P F S F VPEG + G +G V A D DEG
Sbjct: 2677 AIAVDPGNYSATVTVQVYITGEDEYDPVFTSSELLFEVPEGAKKGQVIGTVQARDEDEGV 2736
Query: 133 NAVVYYSVPEDIP-FVVDANTGDI 155
+ +V YS+ E P F V+++TG I
Sbjct: 2737 DGIVLYSLSESSPYFEVNSSTGTI 2760
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 54/89 (60%), Gaps = 6/89 (6%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE--- 142
T++I V DIND P FQ Y + E Q G ++ +V A+D+DEGQN +V Y +
Sbjct: 228 TLDITVQDINDNAPVFQQSRYHTIISENLQPGNSILQVFASDSDEGQNGMVSYEINRRQS 287
Query: 143 --DIPFVVDANTGDIRTNKALDYEKQQLY 169
D FV+D+++G I NK LD+E ++++
Sbjct: 288 DPDQYFVIDSHSGVITLNKPLDFEMRRVH 316
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 74/167 (44%), Gaps = 28/167 (16%)
Query: 30 GVTLMQVKATDKD-SGKFGLVEYRLLDNNTDAASYFNLDPATE-----HQGPIQDEGGL- 82
G ++ +ATD+D SG ++Y +L + LDP T H+ + L
Sbjct: 1392 GSSVYTFQATDRDGSGANSAIKYSILHQSPSTPGLLTLDPVTGILSLGHKLDYETTSTLI 1451
Query: 83 ----------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHA 125
S+ T ++ VTD ND P F S P SV E Q G V V A
Sbjct: 1452 LVVKATDSAVDVSQRRWSSVTASVYVTDENDNLPVFMS-PTAVSVMEDQTMGFVVLFVIA 1510
Query: 126 TDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLY 169
DAD+G+N V Y + F +++NTG + +K LD E+Q ++
Sbjct: 1511 RDADQGENGRVTYRIQSGNTRGTFSLNSNTGSLSISKPLDREEQDVF 1557
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 27/164 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQDEGGLSST- 85
G ++ + A+D DS G V+Y + ++ D F +D T Q P+ + LS T
Sbjct: 2513 GTEILHLSASDPDSAPNGEVQYFI--SSGDETHLFQMDSWTGALRLQRPLDSKTQLSHTI 2570
Query: 86 -------------ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEG 131
A V+I V DIND P F S+ E Q + V +HA D D G
Sbjct: 2571 VVQAVDGQGHYALAPVHIEVKDINDHKPFFPLQHITASIKENQPENSLVTILHAIDQDRG 2630
Query: 132 QNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
++ Y + D P +++ +G++RT A D+EK+ +
Sbjct: 2631 AFGMLTYHM-LDSPKEGVEGILINQTSGEVRTRSAFDFEKKNSF 2673
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 58/122 (47%), Gaps = 25/122 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGPI 76
G ++ V ATD+DSG G + YR++ + F +DP+ EH +
Sbjct: 2291 GSAIITVTATDRDSGNNGKITYRVM---STTKGIFYIDPSNGTLFTGQNTEFDYEHPSIL 2347
Query: 77 -----QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDAD 129
QD+G LSST TV I+V+D+ND P F+ Y +V E DGL V D
Sbjct: 2348 VVVEAQDQGFPPLSSTTTVQIQVSDVNDNAPIFKQSKYTATVSE--DGLLGSTVLTLDPV 2405
Query: 130 EG 131
+G
Sbjct: 2406 DG 2407
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
L + ++ I VTD+ND P F Y ++PE G V +V A D D+G N + YS+
Sbjct: 440 LRAESSFIIEVTDVNDNPPLFDQPVYRQAIPEVVFPGSFVLQVTARDKDQGPNGDISYSI 499
Query: 141 PEDIP-----FVVDANTGDIRTNKALDYEK 165
+D F +D+ TG I T+ LDYEK
Sbjct: 500 LKDQSVYHSWFSIDSVTGIITTSSQLDYEK 529
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 62/137 (45%), Gaps = 20/137 (14%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT---------DAASYFNLD--PATEH 72
R+ G V A D+DSG G + Y L N + ++ LD + H
Sbjct: 1108 RENLPAGTGFGHVLAKDRDSGPNGRLSYSFLHPNRHFQINTHTGEISTRMTLDREQQSSH 1167
Query: 73 QGPI--QDEGGLSSTAT--VNIRVTDINDKNPEF-QSLPYE---FSVPEGQD-GLAVGRV 123
Q + D G S TAT V I V D ND +P F P + V EGQ G+ +G +
Sbjct: 1168 QLAVVVHDGGSPSRTATGTVFITVLDDNDNDPTFIHGQPGKSIIIQVTEGQSPGVLLGTL 1227
Query: 124 HATDADEGQNAVVYYSV 140
A D DEG+N V+YS+
Sbjct: 1228 QAKDPDEGENGTVFYSL 1244
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYS-V 140
+ +ATV I VTD ND +P F +V E G G V A D D G N + YS +
Sbjct: 1079 TGSATVRISVTDENDNSPRFTQERIFMAVRENLPAGTGFGHVLAKDRDSGPNGRLSYSFL 1138
Query: 141 PEDIPFVVDANTGDIRTNKALDYEKQ 166
+ F ++ +TG+I T LD E+Q
Sbjct: 1139 HPNRHFQINTHTGEISTRMTLDREQQ 1164
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 70/160 (43%), Gaps = 26/160 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGPI 76
G + +V A D D G+ G + Y+ + + YF L+ T PI
Sbjct: 690 GTYVAKVMAYDPDLGENGRITYKTVPGGD--SPYFTLNKDTGVISLSRSIYGKANSVIPI 747
Query: 77 ----QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDAD 129
QD GGL + A VNI + P F+ Y F+V E G VG V A+ +
Sbjct: 748 VVSAQDGGGLFALVNAKVNISIVAGLVAPPVFEQTQYHFTVSEDALRGTMVGTVQAS-SK 806
Query: 130 EGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQ 166
G + + Y++ P F VD +TG +RT+ LD+E Q
Sbjct: 807 TGISRDISYAISSGDPTGYFTVDPDTGALRTSLPLDHESQ 846
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 62/146 (42%), Gaps = 24/146 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------- 71
Y + + + G +++QV A+D D G+ G+V Y + +D YF +D +
Sbjct: 248 YHTIISENLQPGNSILQVFASDSDEGQNGMVSYEINRRQSDPDQYFVIDSHSGVITLNKP 307
Query: 72 --------HQGPIQDEGGLS----STATVNIRVTDINDKNPE----FQSLPYEFSVPEG- 114
H+ IQ + + S A V + V D ND P F S + EG
Sbjct: 308 LDFEMRRVHELVIQAQDNATQPEVSNAFVTVHVRDYNDNQPTMTIIFLSEDGSPRISEGA 367
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV 140
Q G V R+ TD D G+ A V S+
Sbjct: 368 QPGQYVARISVTDPDYGEYANVNVSL 393
Score = 38.9 bits (89), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD-EGQNAVVYYSV 140
SS ++I + D ND PEF P + E D G +V ATD D G N+ + YS+
Sbjct: 1357 SSLVHLDIIIEDNNDHTPEFAEDPITIVISENMDPGSSVYTFQATDRDGSGANSAIKYSI 1416
Query: 141 PEDIP-----FVVDANTGDIRTNKALDYE 164
P +D TG + LDYE
Sbjct: 1417 LHQSPSTPGLLTLDPVTGILSLGHKLDYE 1445
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE 142
S A + + V D+ND P F Y+ +V E G A+ V ATD D G N + Y V
Sbjct: 2257 SEANLTVLVDDVNDNAPSFTHDLYQVTVVEHLPAGSAIITVTATDRDSGNNGKITYRVMS 2316
Query: 143 DIP--FVVDANTGDIRT--NKALDYEKQQLYL 170
F +D + G + T N DYE + +
Sbjct: 2317 TTKGIFYIDPSNGTLFTGQNTEFDYEHPSILV 2348
>gi|307188566|gb|EFN73294.1| Protocadherin-like wing polarity protein stan [Camponotus
floridanus]
Length = 3165
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 83/176 (47%), Gaps = 29/176 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLDPATEHQGPIQD--------- 78
+GVT++ V ATD D GK + Y L DN + F ++P T G I
Sbjct: 819 VGVTVLVVSATDSDVGKNAQITYSLATDNGEQTINEFTINPQT---GAITTTKALDRELI 875
Query: 79 ----------EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVH 124
+GG LS T V I VTD+ND P F++ Y S+PE G +V R+
Sbjct: 876 PSYLLTVTARDGGIPPLSDTTDVEISVTDVNDNAPVFEAPQYLGSIPEDVLVGTSVVRIA 935
Query: 125 ATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
ATDAD N V Y++ + D F +D+ TG +RT K LD E Y + I +
Sbjct: 936 ATDADTDLNGRVRYALEDDGDGAFAIDSMTGIVRTAKPLDRESVARYTLKAAAIDR 991
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 81/186 (43%), Gaps = 35/186 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----EHQG 74
Y A R+ +G T++ VKATD+D+G+ VEY ++ + D AT G
Sbjct: 371 YDATVREGVPVGSTVVTVKATDQDTGRNAEVEYCIISTTAGDTTTHTEDAATFRIDSRSG 430
Query: 75 PIQDEGGL-------------------------SSTATVNIRVTDINDKNPEFQSLPYEF 109
+ L S+ AT+ +RV D ND P+F Y
Sbjct: 431 VVTTRTPLDREVIEVYTVVLSVTDQATPPSTRRSTNATLMVRVLDDNDNYPQFTERTYSA 490
Query: 110 SVPEGQDGLA---VGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDY 163
SV E D + V R+ ATDAD G NA V Y++ F +D+ +GD+ K LDY
Sbjct: 491 SVSEDLDYTSNPVVARIRATDADAGANAAVRYAIIGGNTQNTFSIDSMSGDVALVKPLDY 550
Query: 164 EKQQLY 169
E + Y
Sbjct: 551 ESIRNY 556
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 76/164 (46%), Gaps = 27/164 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPI----Q 77
+ +++ATD D+G V Y ++ NT D A LD + I Q
Sbjct: 504 VARIRATDADAGANAAVRYAIIGGNTQNTFSIDSMSGDVALVKPLDYESIRNYKIVIRAQ 563
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNA 134
D G S+T + + V D+ND P F + ++ SV E G +V RV A DADE NA
Sbjct: 564 DGGSPARSNTTQLLVMVKDVNDNAPRFYTSHFQESVSENVPLGYSVLRVQAYDADESNNA 623
Query: 135 VVYYSV---------PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ Y++ E+ P V+A TG I T K LD E+ Y
Sbjct: 624 LIKYNIGARDFTGASTENFPITVNAETGWIYTTKQLDREQCSRY 667
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 85/180 (47%), Gaps = 27/180 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEG-------- 80
+G +++++ ATD D+ G V Y L D+ A + ++ P+ E
Sbjct: 927 VGTSVVRIAATDADTDLNGRVRYALEDDGDGAFAIDSMTGIVRTAKPLDRESVARYTLKA 986
Query: 81 --------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
LSS V +++ DIND P F+S + E G VG ++A D DEG
Sbjct: 987 AAIDRGSPALSSVVPVIVKIEDINDSPPAFESDKIILYIAENSPIGSTVGEIYAHDPDEG 1046
Query: 132 QNAVVYYSV--PEDI-PFVVD----ANTGDIRTNKALDYEKQQLYLERVFLISKFATSYL 184
QNAVV+YS+ EDI F + A+ ++ T + LDYE + E LI + A+S L
Sbjct: 1047 QNAVVHYSIIGGEDINSFTLHIRQGADRAELITLEELDYESPKKKFE---LIVRAASSPL 1103
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 55/100 (55%), Gaps = 7/100 (7%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG + TA V + V+D N+ +P F++ PY SV E G+ V V ATD+D G+NA +
Sbjct: 780 DSGGRTDTALVYVNVSDANNFSPVFENAPYSVSVFEDAPVGVTVLVVSATDSDVGKNAQI 839
Query: 137 YYSVPED------IPFVVDANTGDIRTNKALDYEKQQLYL 170
YS+ D F ++ TG I T KALD E YL
Sbjct: 840 TYSLATDNGEQTINEFTINPQTGAITTTKALDRELIPSYL 879
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 74/187 (39%), Gaps = 40/187 (21%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
Y A ++ E GV + V+A D ++G L+D + A LD T G +
Sbjct: 265 LYVAAVEEEKEKGVYVTTVRARDPENGAVRYSMNSLIDARSQA--LLALDSVT---GRVT 319
Query: 78 DEGGL----------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
L + T T+ + V D ND P F+ Y+ +V EG
Sbjct: 320 THDRLDRENVDVHYFRVLAVDDSFPPRTGTTTLQVNVLDANDHTPSFEWSEYDATVREGV 379
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSV-----------PEDIP-FVVDANTGDIRTNKALD 162
G V V ATD D G+NA V Y + ED F +D+ +G + T LD
Sbjct: 380 PVGSTVVTVKATDQDTGRNAEVEYCIISTTAGDTTTHTEDAATFRIDSRSGVVTTRTPLD 439
Query: 163 YEKQQLY 169
E ++Y
Sbjct: 440 REVIEVY 446
Score = 39.3 bits (90), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 31/171 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL-------------------DPA 69
LG ++++V+A D D L++Y + + AS N +
Sbjct: 605 LGYSVLRVQAYDADESNNALIKYNIGARDFTGASTENFPITVNAETGWIYTTKQLDREQC 664
Query: 70 TEHQGPI----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVH 124
+ +Q + E S++ATV + VTD+ND +P F+ YE + E G V V
Sbjct: 665 SRYQFIVIAMDSGEEPKSASATVILTVTDVNDNDPYFEPKNYEAVISEDDPPGTPVASVT 724
Query: 125 ATDADEGQNAVVYYSVPED-----IPFVVDANTGDIRTNKALDYEKQQLYL 170
ATD DE +A ++Y + G I + LDY++++ ++
Sbjct: 725 ATDPDE--DARIHYEITGGNTRGRFSIASQNGRGLITVAQPLDYKQEKRFV 773
>gi|348581860|ref|XP_003476695.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 isoform 2
[Cavia porcellus]
Length = 3309
Score = 72.0 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 86/176 (48%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQ--GP 75
Y A R+ +++V ATD+D GLV Y ++ N+ +F +D T E Q P
Sbjct: 540 YVAQVREDVRPHTVVLRVTATDQDKDANGLVHYNIISGNSRG--HFAIDSLTGEIQVVAP 597
Query: 76 I--------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ QD G ++T +I+V DIND P F S P++ SV E G
Sbjct: 598 LDFEAEREYVLRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLENAPLG 657
Query: 118 LAVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+V + A DAD G+NA + YS V D PFV+++ TG + + +LD E + Y
Sbjct: 658 HSVIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATGWVSVSGSLDRESVEHYF 713
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQG 74
+++Q+ ATD+D+ G V+Y N D F ++P + E
Sbjct: 969 SVLQISATDRDAHANGRVQYTF-QNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTA 1027
Query: 75 PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G L + ++ + V D+ND P F + +E V E G V ++ A D DEG
Sbjct: 1028 YAVDRGVPPLRTPVSIQVIVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDEG 1087
Query: 132 QNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE +Q Y+
Sbjct: 1088 PNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYV 1129
Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 32/185 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPAT----- 70
Y R+ E G ++Q++ATD D+ + YR + AA+ F +DP +
Sbjct: 428 YRETLRENVEEGYPILQLRATDGDAPLNANLHYRFVGPPATRKAAAAAFEIDPRSGLIST 487
Query: 71 ------EH------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH QG Q+ G S+T V+I V D ND P+F Y V
Sbjct: 488 SGRVDREHMESYELVVEASDQG--QEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVR 545
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E + V RV ATD D+ N +V+Y++ F +D+ TG+I+ LD+E ++
Sbjct: 546 EDVRPHTVVLRVTATDQDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVVAPLDFEAERE 605
Query: 169 YLERV 173
Y+ R+
Sbjct: 606 YVLRI 610
Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V+I +TD N P FQS Y S+ E + G V + A+D D G+NA + Y + +++P
Sbjct: 834 VHINITDANTHRPVFQSAHYSVSMNEDRPVGSTVVVISASDDDVGENARITYLLEDNLPQ 893
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DA++G I LDYE Q Y
Sbjct: 894 FRIDADSGAITLQAPLDYEDQVTY 917
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 35/183 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPATEHQGPI- 76
Y + + G T+++V A D DSG+ G + Y L N+ + F++DP H G I
Sbjct: 320 YQTLVPENEAAGTTVLRVVAQDPDSGEAGRLVYSLAALMNSRSLELFSIDP---HSGLIR 376
Query: 77 -------------------QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG- 114
QD G LS+T V + V D ND +P F+ Y ++ E
Sbjct: 377 TAAALDRESMERHYLRVTAQDHGLPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRENV 436
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV--------PEDIPFVVDANTGDIRTNKALDYEKQ 166
++G + ++ ATD D NA ++Y F +D +G I T+ +D E
Sbjct: 437 EEGYPILQLRATDGDAPLNANLHYRFVGPPATRKAAAAAFEIDPRSGLISTSGRVDREHM 496
Query: 167 QLY 169
+ Y
Sbjct: 497 ESY 499
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEH 72
S Y + +G T++ + A+D D G+ + Y L DN F +D A
Sbjct: 850 SAHYSVSMNEDRPVGSTVVVISASDDDVGENARITYLLEDN----LPQFRIDADSGAITL 905
Query: 73 QGPIQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQD 116
Q P+ E ++ T + R V D+ND P+F + Y V E
Sbjct: 906 QAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVTSHYTGLVSEDAP 965
Query: 117 GL-AVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ++ ATD D N V Y+ D F ++ +G +RT + LD E +Y
Sbjct: 966 PFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVY 1023
Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 49/174 (28%), Positives = 71/174 (40%), Gaps = 24/174 (13%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LD-PATEHQG-- 74
LG +++ ++A D D G+ +EY L D N LD + EH
Sbjct: 656 LGHSVIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATGWVSVSGSLDRESVEHYFFG 715
Query: 75 -PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE 130
+D G LS++A+V + V D+ND PEF + Y + E G +V V A D D
Sbjct: 716 VEARDYGSPPLSASASVTVTVLDVNDNRPEFTTKEYHLRLNEDAAVGTSVVSVTAVDRD- 774
Query: 131 GQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
NA+ Y + G + LDY KQ+ Y + V S A
Sbjct: 775 ANNAISYQITGGNTRNRFAISTQGGVGLVTLALPLDY-KQERYFKLVLTASDRA 827
Score = 40.0 bits (92), Expect = 0.41, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 99 NPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDAN 151
+P+F Y+ VPE + G V RV A D D G+ + YS+ + F +D +
Sbjct: 312 HPQFPQYNYQTLVPENEAAGTTVLRVVAQDPDSGEAGRLVYSLAALMNSRSLELFSIDPH 371
Query: 152 TGDIRTNKALDYEKQQLYLERV 173
+G IRT ALD E + + RV
Sbjct: 372 SGLIRTAAALDRESMERHYLRV 393
Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 65/158 (41%), Gaps = 28/158 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPI- 76
+G + Q+ A D D G + Y++++ N + + +LD + I
Sbjct: 1072 VGSVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIV 1131
Query: 77 --QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRVHA 125
L S ATV++R+ D ND +P + F + P G +GR+ A
Sbjct: 1132 VQATSAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSG----TIGRIPA 1187
Query: 126 TDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALD 162
D D + + ++ VV+ +G++R ++ LD
Sbjct: 1188 YDPDVSDHLFYSFERGNELQLLVVNQTSGELRLSRKLD 1225
>gi|348581858|ref|XP_003476694.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 isoform 1
[Cavia porcellus]
Length = 3302
Score = 72.0 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 86/176 (48%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQ--GP 75
Y A R+ +++V ATD+D GLV Y ++ N+ +F +D T E Q P
Sbjct: 540 YVAQVREDVRPHTVVLRVTATDQDKDANGLVHYNIISGNSRG--HFAIDSLTGEIQVVAP 597
Query: 76 I--------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ QD G ++T +I+V DIND P F S P++ SV E G
Sbjct: 598 LDFEAEREYVLRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLENAPLG 657
Query: 118 LAVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+V + A DAD G+NA + YS V D PFV+++ TG + + +LD E + Y
Sbjct: 658 HSVIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATGWVSVSGSLDRESVEHYF 713
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQG 74
+++Q+ ATD+D+ G V+Y N D F ++P + E
Sbjct: 969 SVLQISATDRDAHANGRVQYTF-QNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTA 1027
Query: 75 PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G L + ++ + V D+ND P F + +E V E G V ++ A D DEG
Sbjct: 1028 YAVDRGVPPLRTPVSIQVIVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDEG 1087
Query: 132 QNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE +Q Y+
Sbjct: 1088 PNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYV 1129
Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 32/185 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPAT----- 70
Y R+ E G ++Q++ATD D+ + YR + AA+ F +DP +
Sbjct: 428 YRETLRENVEEGYPILQLRATDGDAPLNANLHYRFVGPPATRKAAAAAFEIDPRSGLIST 487
Query: 71 ------EH------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH QG Q+ G S+T V+I V D ND P+F Y V
Sbjct: 488 SGRVDREHMESYELVVEASDQG--QEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVR 545
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E + V RV ATD D+ N +V+Y++ F +D+ TG+I+ LD+E ++
Sbjct: 546 EDVRPHTVVLRVTATDQDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVVAPLDFEAERE 605
Query: 169 YLERV 173
Y+ R+
Sbjct: 606 YVLRI 610
Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V+I +TD N P FQS Y S+ E + G V + A+D D G+NA + Y + +++P
Sbjct: 834 VHINITDANTHRPVFQSAHYSVSMNEDRPVGSTVVVISASDDDVGENARITYLLEDNLPQ 893
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DA++G I LDYE Q Y
Sbjct: 894 FRIDADSGAITLQAPLDYEDQVTY 917
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 35/183 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPATEHQGPI- 76
Y + + G T+++V A D DSG+ G + Y L N+ + F++DP H G I
Sbjct: 320 YQTLVPENEAAGTTVLRVVAQDPDSGEAGRLVYSLAALMNSRSLELFSIDP---HSGLIR 376
Query: 77 -------------------QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG- 114
QD G LS+T V + V D ND +P F+ Y ++ E
Sbjct: 377 TAAALDRESMERHYLRVTAQDHGLPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRENV 436
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV--------PEDIPFVVDANTGDIRTNKALDYEKQ 166
++G + ++ ATD D NA ++Y F +D +G I T+ +D E
Sbjct: 437 EEGYPILQLRATDGDAPLNANLHYRFVGPPATRKAAAAAFEIDPRSGLISTSGRVDREHM 496
Query: 167 QLY 169
+ Y
Sbjct: 497 ESY 499
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEH 72
S Y + +G T++ + A+D D G+ + Y L DN F +D A
Sbjct: 850 SAHYSVSMNEDRPVGSTVVVISASDDDVGENARITYLLEDN----LPQFRIDADSGAITL 905
Query: 73 QGPIQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQD 116
Q P+ E ++ T + R V D+ND P+F + Y V E
Sbjct: 906 QAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVTSHYTGLVSEDAP 965
Query: 117 GL-AVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ++ ATD D N V Y+ D F ++ +G +RT + LD E +Y
Sbjct: 966 PFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVY 1023
Score = 42.0 bits (97), Expect = 0.11, Method: Composition-based stats.
Identities = 49/174 (28%), Positives = 71/174 (40%), Gaps = 24/174 (13%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LD-PATEHQG-- 74
LG +++ ++A D D G+ +EY L D N LD + EH
Sbjct: 656 LGHSVIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATGWVSVSGSLDRESVEHYFFG 715
Query: 75 -PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE 130
+D G LS++A+V + V D+ND PEF + Y + E G +V V A D D
Sbjct: 716 VEARDYGSPPLSASASVTVTVLDVNDNRPEFTTKEYHLRLNEDAAVGTSVVSVTAVDRD- 774
Query: 131 GQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
NA+ Y + G + LDY KQ+ Y + V S A
Sbjct: 775 ANNAISYQITGGNTRNRFAISTQGGVGLVTLALPLDY-KQERYFKLVLTASDRA 827
Score = 40.0 bits (92), Expect = 0.41, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 99 NPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDAN 151
+P+F Y+ VPE + G V RV A D D G+ + YS+ + F +D +
Sbjct: 312 HPQFPQYNYQTLVPENEAAGTTVLRVVAQDPDSGEAGRLVYSLAALMNSRSLELFSIDPH 371
Query: 152 TGDIRTNKALDYEKQQLYLERV 173
+G IRT ALD E + + RV
Sbjct: 372 SGLIRTAAALDRESMERHYLRV 393
Score = 38.1 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 65/158 (41%), Gaps = 28/158 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPI- 76
+G + Q+ A D D G + Y++++ N + + +LD + I
Sbjct: 1072 VGSVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIV 1131
Query: 77 --QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRVHA 125
L S ATV++R+ D ND +P + F + P G +GR+ A
Sbjct: 1132 VQATSAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSG----TIGRIPA 1187
Query: 126 TDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALD 162
D D + + ++ VV+ +G++R ++ LD
Sbjct: 1188 YDPDVSDHLFYSFERGNELQLLVVNQTSGELRLSRKLD 1225
>gi|332029981|gb|EGI69806.1| Protocadherin-like wing polarity protein stan [Acromyrmex
echinatior]
Length = 3164
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 84/186 (45%), Gaps = 35/186 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-------NNTDAASYFNLDPAT- 70
Y A R+ +G T++ VKATD+D+G+ VEY ++ + + + F +DP +
Sbjct: 371 YDASVREGVPVGSTVITVKATDQDTGRNAEVEYSIVSIMAGSSITHMEDTATFRIDPRSG 430
Query: 71 --EHQGPIQDE-------------------GGLSSTATVNIRVTDINDKNPEFQSLPYEF 109
+ P+ E SS AT+ +RV D ND P+F Y
Sbjct: 431 VVTTRTPLDREQTEIYTVVLSVTDQATPPSARRSSNATLVVRVLDDNDNYPQFTERTYSA 490
Query: 110 SVPEGQD---GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDY 163
+VPE D + R+ A DAD G NA V Y++ F +D+ GD+ K LDY
Sbjct: 491 TVPEDLDYTTNPVIARIRAMDADAGANAAVRYAIIGGNTQNTFSIDSMNGDVTLVKPLDY 550
Query: 164 EKQQLY 169
E + Y
Sbjct: 551 ESTRSY 556
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 78/169 (46%), Gaps = 33/169 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLDPATEHQGPIQD--------- 78
+GVT++ V ATD D GK + Y L DN + F ++ T G I
Sbjct: 819 IGVTVLVVSATDADVGKNAQITYSLATDNGEQVITEFTINSQT---GAITTTKALDRESV 875
Query: 79 ----------EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL---AVGR 122
+GG LS T V I VTD+ND P F++ Y S+ E D L +V R
Sbjct: 876 PSYLLTVTARDGGVPSLSDTTDVEISVTDVNDNAPVFEAPQYHGSILE--DVLLSTSVLR 933
Query: 123 VHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
V ATDAD N V Y + + D F +D+ TG IRT K LD E Y
Sbjct: 934 VAATDADTDLNGRVRYGLEDDGDGAFTIDSTTGIIRTAKILDRESVAYY 982
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 56/100 (56%), Gaps = 7/100 (7%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D G + TA V + V+D N+ +PEF++ PY SV E G+ V V ATDAD G+NA +
Sbjct: 780 DTGSRTDTALVYVNVSDANNYSPEFENAPYSVSVFEDAPIGVTVLVVSATDADVGKNAQI 839
Query: 137 YYSVPED------IPFVVDANTGDIRTNKALDYEKQQLYL 170
YS+ D F +++ TG I T KALD E YL
Sbjct: 840 TYSLATDNGEQVITEFTINSQTGAITTTKALDRESVPSYL 879
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 74/164 (45%), Gaps = 27/164 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPI----Q 77
+ +++A D D+G V Y ++ NT D LD + I Q
Sbjct: 504 IARIRAMDADAGANAAVRYAIIGGNTQNTFSIDSMNGDVTLVKPLDYESTRSYKIVIRAQ 563
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNA 134
D G S+T + + V D+ND P F + ++ SV E G ++ RV A DADEG NA
Sbjct: 564 DGGSPARSNTTQLLVMVRDVNDNAPRFYTSHFQESVSESVPVGYSILRVQAYDADEGNNA 623
Query: 135 VVYYSV---------PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ Y++ E+ P V A TG I T K LD E+ Y
Sbjct: 624 LIKYTIGARDFTGASTENFPITVKAETGWIYTTKQLDREQCSKY 667
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 84/185 (45%), Gaps = 35/185 (18%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN--------------------N 57
++G++ D L ++++V ATD D+ G V Y L D+ +
Sbjct: 917 YHGSILEDVL-LSTSVLRVAATDADTDLNGRVRYGLEDDGDGAFTIDSTTGIIRTAKILD 975
Query: 58 TDAASYFNLDP-ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
++ +Y+ L AT+ P LSS V I++ DIND P F++ + E
Sbjct: 976 RESVAYYTLKAVATDRGSP-----ALSSIVPVTIKIEDINDSPPAFENDKIILYITENSP 1030
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTG----DIRTNKALDYEKQQL 168
G VG ++A D DEG NAVV YS+ + F ++ G ++ T + LDYE +
Sbjct: 1031 IGSTVGEIYAHDPDEGPNAVVQYSIIGGEDSNSFSLNVRQGADRAELITLEELDYESPKK 1090
Query: 169 YLERV 173
E V
Sbjct: 1091 KFELV 1095
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 75/187 (40%), Gaps = 40/187 (21%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
Y A ++ E G+ + VKA D ++G L+D + A LDP T G +
Sbjct: 265 LYLAAVEEEKEPGMYVTSVKARDPENGAVRYSMSSLVDARSQA--LLALDPVT---GRVT 319
Query: 78 DEGGL----------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
L + T T+ + V D ND P F+ Y+ SV EG
Sbjct: 320 TRARLDRENVDVHYFRVLAVDDSFPPRTGTTTLQVNVLDANDHTPSFEGPEYDASVREGV 379
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSV------------PEDIPFVVDANTGDIRTNKALD 162
G V V ATD D G+NA V YS+ + F +D +G + T LD
Sbjct: 380 PVGSTVITVKATDQDTGRNAEVEYSIVSIMAGSSITHMEDTATFRIDPRSGVVTTRTPLD 439
Query: 163 YEKQQLY 169
E+ ++Y
Sbjct: 440 REQTEIY 446
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 31/171 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL-------------------DPA 69
+G ++++V+A D D G L++Y + + AS N +
Sbjct: 605 VGYSILRVQAYDADEGNNALIKYTIGARDFTGASTENFPITVKAETGWIYTTKQLDREQC 664
Query: 70 TEHQGPI----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVH 124
+++Q + E S++ATV + VTD+ND +P F+ YE V E G V V
Sbjct: 665 SKYQFTVIAADSGEEPKSASATVFLTVTDVNDNDPYFEPKTYEAVVSEDSLAGTPVTTVT 724
Query: 125 ATDADEGQNAVVYYSVP---EDIPFVVDANTGD--IRTNKALDYEKQQLYL 170
ATD DE ++ ++Y + F + + G I + LDY++++ ++
Sbjct: 725 ATDPDE--DSRIHYEITGGNTRGRFSISSQNGRGLITIAQTLDYKQEKRFV 773
>gi|327269525|ref|XP_003219544.1| PREDICTED: neural-cadherin-like [Anolis carolinensis]
Length = 2539
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 78/172 (45%), Gaps = 31/172 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------------ 70
+G ++MQV ATD DSG G V Y +L +++ YF +D +
Sbjct: 777 IGTSVMQVLATDADSGLNGEVHYSILKDSSGDYQYFTIDSTSGVISTLASFDREKRASYL 836
Query: 71 -EHQGPIQDEGGL--------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAV 120
E Q E + TA V I ++D+ND P F L YE V E QD G AV
Sbjct: 837 IEVQSQDSSESARPGIYGQPNTDTAYVRIFISDVNDNCPAFPHLVYETDVDEDQDVGYAV 896
Query: 121 GRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ATD DEG NA + Y + E F V+ G I + LDYE+++ Y
Sbjct: 897 LTATATDKDEGSNAKLRYQITSGNEQGDFYVEPEKGTILIAQHLDYEQERHY 948
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 6/98 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+S TV + +TD+ND P F S YE SVPEG G +V +V ATDAD G N V+YS+
Sbjct: 742 LASFTTVYVNITDVNDNVPFFTSSTYEVSVPEGAGIGTSVMQVLATDADSGLNGEVHYSI 801
Query: 141 PEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERV 173
+D F +D+ +G I T + D EK+ YL V
Sbjct: 802 LKDSSGDYQYFTIDSTSGVISTLASFDREKRASYLIEV 839
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 89/195 (45%), Gaps = 41/195 (21%)
Query: 14 SDSLFYGAMARDKHELGVTLMQVKATDKD---SGKFGLVEYRLLDN--NTDAASYFNLDP 68
SD F G + D T+M++ A D D +GK ++ Y ++ N N + F+++P
Sbjct: 1090 SDGCFMGQIPEDS-PADSTVMEMLAIDLDDPAAGKNAVLTYNIIQNVKNEINLNLFSVNP 1148
Query: 69 ATEHQGPI---------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPY 107
T G I +D GGL+ T T I VTDIND P F Y
Sbjct: 1149 VT---GTIYTVLSTLDREKRDKYLVVVEAKDGGGLTGTGTATILVTDINDHAPAFTQKIY 1205
Query: 108 EFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDAN----TGDIRTNK 159
V EG V V ATD DEG+NAVV +S+ +D F ++ + G IR K
Sbjct: 1206 TAFVSEGASVNTLVAEVSATDEDEGENAVVTFSILDGDDDHKFYIETDKANKCGVIRLRK 1265
Query: 160 ALDYEKQQLYLERVF 174
+D+EK ERVF
Sbjct: 1266 EIDFEKPH---ERVF 1277
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPY---EFSVPEGQD-GLAVGRVHATDADEGQNAVVY 137
L S A V + + DIN+ P F+ Y V E Q G V RV A DAD GQN V
Sbjct: 421 LCSFAEVVVGINDINNNKPIFRECAYYSDNTWVLENQPPGTYVLRVEAYDADLGQNGEVK 480
Query: 138 YSVPE---DIP-FVVDANTGDIRTNKALDYEKQQLYLERVF 174
YS+ +P F +D ++G I T ++ D EKQ+ Y+ V
Sbjct: 481 YSLMHRDGSLPGFSIDPDSGVITTTRSFDREKQREYMLSVI 521
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 71/173 (41%), Gaps = 20/173 (11%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF-----------N 65
L Y + ++G ++ ATDKD G + Y++ N Y +
Sbjct: 880 LVYETDVDEDQDVGYAVLTATATDKDEGSNAKLRYQITSGNEQGDFYVEPEKGTILIAQH 939
Query: 66 LDPATEHQGPIQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AV 120
LD E +Q +G + V I V +IND+ P F Y SV E L V
Sbjct: 940 LDYEQERHYKLQLVTSDGKWENHTLVVINVININDEAPVFSQDEYHGSVLEELADLPVLV 999
Query: 121 GRVHATDADE--GQNAVVY--YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ATD D+ Q Y + F ++ TG+I N+ LD EK+ ++
Sbjct: 1000 LQVSATDPDQETKQGGFCYSLHGQGAQSEFSINELTGEITANERLDREKRSMW 1052
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 38/178 (21%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI----------QDE 79
G +++V+A D D G+ G V+Y L+ + F++DP + G I Q E
Sbjct: 460 GTYVLRVEAYDADLGQNGEVKYSLMHRDGSLPG-FSIDPDS---GVITTTRSFDREKQRE 515
Query: 80 GGLSSTAT------------VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
LS AT + I + D ND +P+F++ Y++ + E G + A
Sbjct: 516 YMLSVIATDQAQEPLIGMCQITIYIADENDNDPKFENSRYQYFLREDTPVGTSFLCATAH 575
Query: 127 DADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATS 182
D D+G NA + YS+ + P F ++ +TG + N + + F I+++ T+
Sbjct: 576 DDDQGANAAITYSMVQQEPEYFKINPSTGWVYVNHV---------ISQTFQINRYITA 624
Score = 42.7 bits (99), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 76 IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF-----SVPEGQDGLAVGRVHATDADE 130
++ E LSS V + +TD ND PEFQ Y S+P G L +V ATD D
Sbjct: 206 MERESLLSSVTEVIVHITDENDCFPEFQQSIYSRENILESIPIGTSLL---QVLATDCDS 262
Query: 131 GQNA-VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
G N+ ++Y+ D + G I +N+ LD+E+ E V +
Sbjct: 263 GSNSEIIYFLQTADFSITPE---GVISSNQQLDFEQSNHMYEFVVI 305
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 19/95 (20%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN------------LDPATEHQGPI 76
LG ++QV D DSG G YRLL N +D + F+ LD T Q +
Sbjct: 1324 LGTKVVQVIGIDLDSGLNGRFSYRLL-NKSDPSGRFSVANDGWVIVAGELDYETVAQYQL 1382
Query: 77 ----QDEG--GLSSTATVNIRVTDINDKNPEFQSL 105
D G LSS+ATV + + D+ND PEF +L
Sbjct: 1383 VVIATDMGQPALSSSATVLVALQDVNDNGPEFDAL 1417
Score = 36.6 bits (83), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 82/191 (42%), Gaps = 43/191 (22%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDS-GKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI 76
++G++ + +L V ++QV ATD D K G Y L + A S F+++ T G I
Sbjct: 984 YHGSVLEELADLPVLVLQVSATDPDQETKQGGFCYSL--HGQGAQSEFSINELT---GEI 1038
Query: 77 ----------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLP---YEFSV 111
+D GL+ A V I V D+ND P F + +
Sbjct: 1039 TANERLDREKRSMWRFLVLATDEDGEGLTGFADVIIEVLDVNDNAPLFLCASDGCFMGQI 1098
Query: 112 PEGQDG-LAVGRVHATDADE---GQNAVVYYSVPEDIP-------FVVDANTGDIRTN-K 159
PE V + A D D+ G+NAV+ Y++ +++ F V+ TG I T
Sbjct: 1099 PEDSPADSTVMEMLAIDLDDPAAGKNAVLTYNIIQNVKNEINLNLFSVNPVTGTIYTVLS 1158
Query: 160 ALDYEKQQLYL 170
LD EK+ YL
Sbjct: 1159 TLDREKRDKYL 1169
Score = 35.8 bits (81), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 18/110 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y R+ +G + + A D D G + Y ++ + YF ++P+T
Sbjct: 555 YQYFLREDTPVGTSFLCATAHDDDQGANAAITYSMVQQEPE---YFKINPSTGWVYVNHV 611
Query: 71 -------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
D G SST + + +TD+ +++P++ Y ++PE
Sbjct: 612 ISQTFQINRYITATDGGNRSSTVELTVTITDVLNQSPQWDESSYSITIPE 661
Score = 35.8 bits (81), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 24/150 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL------------------LDNNTDAASYFNLDPAT 70
+G +L+QV ATD DSG + Y L LD Y + A
Sbjct: 248 IGTSLLQVLATDCDSGSNSEIIYFLQTADFSITPEGVISSNQQLDFEQSNHMYEFVVIAV 307
Query: 71 EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYE-FSVPEGQDGLAVGRVHATDAD 129
+ P + + TA+V IR+ ++ND++P F YE F + G V + A D D
Sbjct: 308 DQGHPAR-----TGTASVRIRMANVNDESPVFSQSVYETFLSEDAGPGTLVATILAKDPD 362
Query: 130 EGQNAVVYYSVPEDIPFVVDANTGDIRTNK 159
+ E+ F +D+ G +R +
Sbjct: 363 GDGVMYLISGGNEEGNFELDSRKGILRLRR 392
>gi|16518999|gb|AAL25099.1|AF427498_1 cadherin EGF LAG seven-pass G-type receptor [Mus musculus]
Length = 3301
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 84/176 (47%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGP 75
Y A R+ +++V ATDKD GLV Y ++ N+ +F +D T + P
Sbjct: 541 YVAQVREDVRPHTVVLRVTATDKDKDANGLVHYNIISGNSRG--HFAIDSLTGEIQVMAP 598
Query: 76 I--------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ QD G ++T +I+V DIND P F S P++ SV E G
Sbjct: 599 LDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIFVSTPFQVSVLENAPLG 658
Query: 118 LAVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+V + A DAD G+N+ + YS V D PFV+++ TG + + LD E + Y
Sbjct: 659 HSVIHIQAVDADHGENSRLEYSLTGVASDTPFVINSATGWVSVSGPLDRESVEHYF 714
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 56/185 (30%), Positives = 86/185 (46%), Gaps = 32/185 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN---NTDAASYFNLDPAT----- 70
Y R+ E G ++Q++ATD D+ + YR + + T AA+ F +DP +
Sbjct: 429 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGSPAVRTAAAAAFEIDPRSGLIST 488
Query: 71 ------EH------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH QG Q+ G S+T V+I V D ND P+F Y V
Sbjct: 489 SGRVDREHMESYELVVEASDQG--QEPGPRSATVRVHITVLDENDNAPQFGEKRYVAQVR 546
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E + V RV ATD D+ N +V+Y++ F +D+ TG+I+ LD+E ++
Sbjct: 547 EDVRPHTVVLRVTATDKDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVMAPLDFEAERE 606
Query: 169 YLERV 173
Y R+
Sbjct: 607 YALRI 611
Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQG 74
+++Q+ ATD+D+ G V+Y N D F ++P + E
Sbjct: 970 SVLQISATDRDAHANGRVQYTF-QNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTA 1028
Query: 75 PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G L + ++ + V D+ND P F + +E V E G V ++ A D D+G
Sbjct: 1029 YAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDDG 1088
Query: 132 QNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE +Q Y+
Sbjct: 1089 PNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYV 1130
Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V+I +TD N P FQS Y S+ E + G V + A+D D G+NA + Y + +++P
Sbjct: 835 VHINITDANTHRPVFQSAHYSVSMNEDRPVGSTVVVISASDDDVGENARITYLLEDNLPQ 894
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DA++G I LDYE Q Y
Sbjct: 895 FRIDADSGAITLQAPLDYEDQVTY 918
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 29/180 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT------- 70
Y + + G ++++V A D D G+ G + Y L N+ + F++DP +
Sbjct: 321 YQTLVPENEAAGTSVLRVVAQDPDPGEAGRLIYSLAALMNSRSLELFSIDPQSGLIRTAA 380
Query: 71 --------EHQGPI--QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
H + QD G LS+T V + V D ND P F+ Y ++ E ++G
Sbjct: 381 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRENVEEG 440
Query: 118 LAVGRVHATDADEGQNAVVYY--------SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ ++ ATD D NA + Y F +D +G I T+ +D E + Y
Sbjct: 441 YPILQLRATDGDAPPNANLRYRFVGSPAVRTAAAAAFEIDPRSGLISTSGRVDREHMESY 500
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEH 72
S Y + +G T++ + A+D D G+ + Y L DN F +D A
Sbjct: 851 SAHYSVSMNEDRPVGSTVVVISASDDDVGENARITYLLEDN----LPQFRIDADSGAITL 906
Query: 73 QGPIQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQD 116
Q P+ E ++ T + R V D+ND P+F + Y V E
Sbjct: 907 QAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAP 966
Query: 117 GL-AVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ++ ATD D N V Y+ D F ++ +G +RT + LD E +Y
Sbjct: 967 PFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVY 1024
Score = 43.5 bits (101), Expect = 0.034, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 70/176 (39%), Gaps = 28/176 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI--------- 76
LG +++ ++A D D G+ +EY L +D F ++ AT GP+
Sbjct: 657 LGHSVIHIQAVDADHGENSRLEYSLTGVASDTP--FVINSATGWVSVSGPLDRESVEHYF 714
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDAD 129
+D G LS++A+V + V D+ND PEF Y + E + V T D
Sbjct: 715 FGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNE-DAAVGTSVVSVTAVD 773
Query: 130 EGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
N+ + Y + G + LDY KQ+ Y + V S A
Sbjct: 774 RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLDY-KQERYFKLVLTASDRA 828
Score = 41.2 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVD 149
+++P+F Y+ VPE + G +V RV A D D G+ + YS+ + F +D
Sbjct: 311 NRHPQFPQYNYQTLVPENEAAGTSVLRVVAQDPDPGEAGRLIYSLAALMNSRSLELFSID 370
Query: 150 ANTGDIRTNKALDYEKQQLYLERV 173
+G IRT ALD E + + RV
Sbjct: 371 PQSGLIRTAAALDRESMERHYLRV 394
Score = 37.4 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 20/154 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPI- 76
+G + Q+ A D D G + Y++++ N + + +LD + I
Sbjct: 1073 VGSVVAQITAVDPDDGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIV 1132
Query: 77 --QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFS--VPEGQDGLA---VGRVHATDAD 129
L S ATV++R+ D ND +P + F+ V D +GR+ A D D
Sbjct: 1133 VQATSAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPD 1192
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALD 162
+ + ++ VV+ +G++R ++ LD
Sbjct: 1193 VSDHLFYSFERGNELQLLVVNRTSGELRLSRKLD 1226
>gi|148689369|gb|EDL21316.1| cadherin EGF LAG seven-pass G-type receptor 3, isoform CRA_a [Mus
musculus]
Length = 3302
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 84/176 (47%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGP 75
Y A R+ +++V ATDKD GLV Y ++ N+ +F +D T + P
Sbjct: 541 YVAQVREDVRPHTVVLRVTATDKDKDANGLVHYNIISGNSRG--HFAIDSLTGEIQVMAP 598
Query: 76 I--------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ QD G ++T +I+V DIND P F S P++ SV E G
Sbjct: 599 LDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIFVSTPFQVSVLENAPLG 658
Query: 118 LAVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+V + A DAD G+N+ + YS V D PFV+++ TG + + LD E + Y
Sbjct: 659 HSVIHIQAVDADHGENSRLEYSLTGVASDTPFVINSATGWVSVSGPLDRESVEHYF 714
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 56/185 (30%), Positives = 86/185 (46%), Gaps = 32/185 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN---NTDAASYFNLDPAT----- 70
Y R+ E G ++Q++ATD D+ + YR + + T AA+ F +DP +
Sbjct: 429 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGSPAVRTAAAAAFEIDPRSGLIST 488
Query: 71 ------EH------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH QG Q+ G S+T V+I V D ND P+F Y V
Sbjct: 489 SGRVDREHMESYELVVEASDQG--QEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVR 546
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E + V RV ATD D+ N +V+Y++ F +D+ TG+I+ LD+E ++
Sbjct: 547 EDVRPHTVVLRVTATDKDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVMAPLDFEAERE 606
Query: 169 YLERV 173
Y R+
Sbjct: 607 YALRI 611
Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQG 74
+++Q+ ATD+D+ G V+Y N D F ++P + E
Sbjct: 970 SVLQISATDRDAHANGRVQYTF-QNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTA 1028
Query: 75 PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G L + ++ + V D+ND P F + +E V E G V ++ A D D+G
Sbjct: 1029 YAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDDG 1088
Query: 132 QNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE +Q Y+
Sbjct: 1089 PNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYV 1130
Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V+I +TD N P FQS Y S+ E + G V + A+D D G+NA + Y + +++P
Sbjct: 835 VHINITDANTHRPVFQSAHYSVSMNEDRPVGSTVVVISASDDDVGENARITYLLEDNLPQ 894
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DA++G I LDYE Q Y
Sbjct: 895 FRIDADSGAITLQAPLDYEDQVTY 918
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 29/180 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT------- 70
Y + + G ++++V A D D G+ G + Y L N+ + F++DP +
Sbjct: 321 YQTLVPENEAAGTSVLRVVAQDPDPGEAGRLIYSLAALMNSRSLELFSIDPQSGLIRTAA 380
Query: 71 --------EHQGPI--QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
H + QD G LS+T V + V D ND P F+ Y ++ E ++G
Sbjct: 381 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRENVEEG 440
Query: 118 LAVGRVHATDADEGQNAVVYY--------SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ ++ ATD D NA + Y F +D +G I T+ +D E + Y
Sbjct: 441 YPILQLRATDGDAPPNANLRYRFVGSPAVRTAAAAAFEIDPRSGLISTSGRVDREHMESY 500
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEH 72
S Y + +G T++ + A+D D G+ + Y L DN F +D A
Sbjct: 851 SAHYSVSMNEDRPVGSTVVVISASDDDVGENARITYLLEDN----LPQFRIDADSGAITL 906
Query: 73 QGPIQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQD 116
Q P+ E ++ T + R V D+ND P+F + Y V E
Sbjct: 907 QAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAP 966
Query: 117 GL-AVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ++ ATD D N V Y+ D F ++ +G +RT + LD E +Y
Sbjct: 967 PFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVY 1024
Score = 43.5 bits (101), Expect = 0.034, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 70/176 (39%), Gaps = 28/176 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI--------- 76
LG +++ ++A D D G+ +EY L +D F ++ AT GP+
Sbjct: 657 LGHSVIHIQAVDADHGENSRLEYSLTGVASDTP--FVINSATGWVSVSGPLDRESVEHYF 714
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDAD 129
+D G LS++A+V + V D+ND PEF Y + E + V T D
Sbjct: 715 FGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNE-DAAVGTSVVSVTAVD 773
Query: 130 EGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
N+ + Y + G + LDY KQ+ Y + V S A
Sbjct: 774 RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLDY-KQERYFKLVLTASDRA 828
Score = 41.2 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVD 149
+++P+F Y+ VPE + G +V RV A D D G+ + YS+ + F +D
Sbjct: 311 NRHPQFPQYNYQTLVPENEAAGTSVLRVVAQDPDPGEAGRLIYSLAALMNSRSLELFSID 370
Query: 150 ANTGDIRTNKALDYEKQQLYLERV 173
+G IRT ALD E + + RV
Sbjct: 371 PQSGLIRTAAALDRESMERHYLRV 394
Score = 37.4 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 20/154 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPI- 76
+G + Q+ A D D G + Y++++ N + + +LD + I
Sbjct: 1073 VGSVVAQITAVDPDDGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIV 1132
Query: 77 --QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFS--VPEGQDGLA---VGRVHATDAD 129
L S ATV++R+ D ND +P + F+ V D +GR+ A D D
Sbjct: 1133 VQATSAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPD 1192
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALD 162
+ + ++ VV+ +G++R ++ LD
Sbjct: 1193 VSDHLFYSFERGNELQLLVVNRTSGELRLSRKLD 1226
>gi|449280308|gb|EMC87635.1| Protocadherin-20, partial [Columba livia]
Length = 899
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 75/160 (46%), Gaps = 26/160 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQGP 75
L ++ ATD DSG+ G V Y L DA SYF+LD T +
Sbjct: 502 LTKLHATDADSGERGQVSYFL---GPDAPSYFSLDKTTGVLTVSTQLDREEKEKYRYTVK 558
Query: 76 IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQ 132
D G S ATV I V D ND +P F + + F VPE G +G + TDAD GQ
Sbjct: 559 AVDSGFPPRESIATVTITVLDKNDNSPRFINKDFSFFVPENFPGFGEIGVISVTDADAGQ 618
Query: 133 NAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
N V SV DI FV+D G +R +LD E+Q Y+
Sbjct: 619 NGWVALSVLNGSDI-FVIDTGKGVLRAKVSLDREQQSSYV 657
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 67/165 (40%), Gaps = 37/165 (22%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP---------------------- 75
A D D G G+ YRL DN F LD G
Sbjct: 182 ALDPDVGTNGVQTYRLRDN----YGVFTLDVEENESGERTPYLIVMGALDRETREEYVTV 237
Query: 76 -IQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
I ++GG L +AT+ I ++DIND P+F +V G V VHA D D
Sbjct: 238 IIAEDGGIPPLVGSATLTIGISDINDNCPQFSDSQLNVTVYGNSSLGTRVTTVHAVDMDL 297
Query: 131 GQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
G NA + YS + +P F +D +TG I + +D + +L+
Sbjct: 298 GSNAQITYSYSQKVPQPSRDLFHLDESTGTISLSNKVDGDAPRLH 342
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 73/168 (43%), Gaps = 32/168 (19%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA----------ASYFNLDPATEHQGPIQ 77
E+GV + TD D+G+ G V +L N +D + +LD + +
Sbjct: 605 EIGV----ISVTDADAGQNGWVALSVL-NGSDIFVIDTGKGVLRAKVSLDREQQSSYVLW 659
Query: 78 DE---GG---LSSTATVNIRVTDINDKNPEFQSLP-----YEFSVPEGQDGLAVGRVHAT 126
E GG LSSTA + I + DIND NP P Y +P G + V+A
Sbjct: 660 IEAVDGGDPALSSTAKITILLLDIND-NPPLVLFPQSNMSYLLVLPSTLPGSPITEVYAV 718
Query: 127 DADEGQNAVVYYSV-----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D D G NAV+ YS+ P F +D TG+I ++L LY
Sbjct: 719 DKDTGMNAVIAYSIIGRRGPRPESFRIDPKTGNITLEESLMQNDYGLY 766
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYS 139
G + ++V D ND +P F E S+ E A + ++HATDAD G+ V Y
Sbjct: 462 GFRVNKIIKVQVLDDNDNSPVFSQQLVELSIEENNVPNAFLTKLHATDADSGERGQVSYF 521
Query: 140 VPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+ D P F +D TG + + LD E+++ Y
Sbjct: 522 LGPDAPSYFSLDKTTGVLTVSTQLDREEKEKY 553
>gi|148689370|gb|EDL21317.1| cadherin EGF LAG seven-pass G-type receptor 3, isoform CRA_b [Mus
musculus]
Length = 3301
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 84/176 (47%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGP 75
Y A R+ +++V ATDKD GLV Y ++ N+ +F +D T + P
Sbjct: 541 YVAQVREDVRPHTVVLRVTATDKDKDANGLVHYNIISGNSRG--HFAIDSLTGEIQVMAP 598
Query: 76 I--------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ QD G ++T +I+V DIND P F S P++ SV E G
Sbjct: 599 LDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIFVSTPFQVSVLENAPLG 658
Query: 118 LAVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+V + A DAD G+N+ + YS V D PFV+++ TG + + LD E + Y
Sbjct: 659 HSVIHIQAVDADHGENSRLEYSLTGVASDTPFVINSATGWVSVSGPLDRESVEHYF 714
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 56/185 (30%), Positives = 86/185 (46%), Gaps = 32/185 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN---NTDAASYFNLDPAT----- 70
Y R+ E G ++Q++ATD D+ + YR + + T AA+ F +DP +
Sbjct: 429 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGSPAVRTAAAAAFEIDPRSGLIST 488
Query: 71 ------EH------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH QG Q+ G S+T V+I V D ND P+F Y V
Sbjct: 489 SGRVDREHMESYELVVEASDQG--QEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVR 546
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E + V RV ATD D+ N +V+Y++ F +D+ TG+I+ LD+E ++
Sbjct: 547 EDVRPHTVVLRVTATDKDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVMAPLDFEAERE 606
Query: 169 YLERV 173
Y R+
Sbjct: 607 YALRI 611
Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQG 74
+++Q+ ATD+D+ G V+Y N D F ++P + E
Sbjct: 970 SVLQISATDRDAHANGRVQYTF-QNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTA 1028
Query: 75 PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G L + ++ + V D+ND P F + +E V E G V ++ A D D+G
Sbjct: 1029 YAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDDG 1088
Query: 132 QNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE +Q Y+
Sbjct: 1089 PNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYV 1130
Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V+I +TD N P FQS Y S+ E + G V + A+D D G+NA + Y + +++P
Sbjct: 835 VHINITDANTHRPVFQSAHYSVSMNEDRPVGSTVVVISASDDDVGENARITYLLEDNLPQ 894
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DA++G I LDYE Q Y
Sbjct: 895 FRIDADSGAITLQAPLDYEDQVTY 918
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 29/180 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT------- 70
Y + + G ++++V A D D G+ G + Y L N+ + F++DP +
Sbjct: 321 YQTLVPENEAAGTSVLRVVAQDPDPGEAGRLIYSLAALMNSRSLELFSIDPQSGLIRTAA 380
Query: 71 --------EHQGPI--QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
H + QD G LS+T V + V D ND P F+ Y ++ E ++G
Sbjct: 381 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRENVEEG 440
Query: 118 LAVGRVHATDADEGQNAVVYY--------SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ ++ ATD D NA + Y F +D +G I T+ +D E + Y
Sbjct: 441 YPILQLRATDGDAPPNANLRYRFVGSPAVRTAAAAAFEIDPRSGLISTSGRVDREHMESY 500
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEH 72
S Y + +G T++ + A+D D G+ + Y L DN F +D A
Sbjct: 851 SAHYSVSMNEDRPVGSTVVVISASDDDVGENARITYLLEDN----LPQFRIDADSGAITL 906
Query: 73 QGPIQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQD 116
Q P+ E ++ T + R V D+ND P+F + Y V E
Sbjct: 907 QAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAP 966
Query: 117 GL-AVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ++ ATD D N V Y+ D F ++ +G +RT + LD E +Y
Sbjct: 967 PFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVY 1024
Score = 43.5 bits (101), Expect = 0.034, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 70/176 (39%), Gaps = 28/176 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI--------- 76
LG +++ ++A D D G+ +EY L +D F ++ AT GP+
Sbjct: 657 LGHSVIHIQAVDADHGENSRLEYSLTGVASDTP--FVINSATGWVSVSGPLDRESVEHYF 714
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDAD 129
+D G LS++A+V + V D+ND PEF Y + E + V T D
Sbjct: 715 FGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNE-DAAVGTSVVSVTAVD 773
Query: 130 EGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
N+ + Y + G + LDY KQ+ Y + V S A
Sbjct: 774 RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLDY-KQERYFKLVLTASDRA 828
Score = 41.2 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVD 149
+++P+F Y+ VPE + G +V RV A D D G+ + YS+ + F +D
Sbjct: 311 NRHPQFPQYNYQTLVPENEAAGTSVLRVVAQDPDPGEAGRLIYSLAALMNSRSLELFSID 370
Query: 150 ANTGDIRTNKALDYEKQQLYLERV 173
+G IRT ALD E + + RV
Sbjct: 371 PQSGLIRTAAALDRESMERHYLRV 394
Score = 37.4 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 20/154 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPI- 76
+G + Q+ A D D G + Y++++ N + + +LD + I
Sbjct: 1073 VGSVVAQITAVDPDDGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIV 1132
Query: 77 --QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFS--VPEGQDGLA---VGRVHATDAD 129
L S ATV++R+ D ND +P + F+ V D +GR+ A D D
Sbjct: 1133 VQATSAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPD 1192
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALD 162
+ + ++ VV+ +G++R ++ LD
Sbjct: 1193 VSDHLFYSFERGNELQLLVVNRTSGELRLSRKLD 1226
>gi|154147662|ref|NP_001093700.1| protocadherin 20 precursor [Xenopus (Silurana) tropicalis]
gi|134026222|gb|AAI36069.1| pcdh20 protein [Xenopus (Silurana) tropicalis]
Length = 894
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 77/167 (46%), Gaps = 26/167 (15%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------- 70
+ +E L ++ ATD DS + G V Y L DA SYF LD T
Sbjct: 489 ENNEPNAFLAKLYATDADSNESGQVSYFL---GPDAPSYFTLDSVTGILSVSTILDREEK 545
Query: 71 ---EHQGPIQDEGGLS--STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVH 124
+D G S S ATV+I V D ND NP F S + F VPE G +G +
Sbjct: 546 EKYRFTVKARDAGFPSRESVATVHITVLDKNDNNPRFISKDFSFFVPENFPGFGEIGVIS 605
Query: 125 ATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
TDAD GQN + S+ DI FV+D G +R +LD E+Q Y
Sbjct: 606 VTDADSGQNGWIALSIGNGSDI-FVIDNGKGLLRAKVSLDREQQSSY 651
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 73/166 (43%), Gaps = 28/166 (16%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRL--------LDNNTDAA-SYFNLDPATEHQGPIQD 78
E+GV + TD DSG+ G + + +DN + +LD + +
Sbjct: 600 EIGV----ISVTDADSGQNGWIALSIGNGSDIFVIDNGKGLLRAKVSLDREQQSSYTLWV 655
Query: 79 E---GG---LSSTATVNIRVTDINDKNPEF----QSLPYEFSVPEGQDGLAVGRVHATDA 128
E GG LSSTA + I + D+ND P ++ Y +P G V V+A D
Sbjct: 656 EAVDGGDPTLSSTAKITILLLDVNDNPPMVLFPQSNMSYLLVLPSTLPGSPVTEVYAVDK 715
Query: 129 DEGQNAVVYYSV-----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D G NAV+ YS+ P+ F +D TG+I +AL LY
Sbjct: 716 DTGMNAVIAYSIIGRRGPKPESFRIDPITGNITLEEALMINDCGLY 761
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 37/158 (23%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGP------------ 75
A D D G G+ YRL+D + F LD P GP
Sbjct: 177 AYDPDGGTNGVQTYRLVDYH----GVFTLDVEENESGERTPYLIIMGPLDRETKAEYETT 232
Query: 76 -IQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADE 130
I ++GG L +AT++I ++D+ND P+F + ++ G V VHA D D
Sbjct: 233 IIAEDGGSPPLVGSATLSILISDVNDNCPQFNASQINATLYGNSTIGTQVVTVHAMDRDL 292
Query: 131 GQNAVVYYSVPEDIP------FVVDANTGDIRTNKALD 162
G NA++ Y+ E +P F +D G I+ +K +D
Sbjct: 293 GPNALITYAFSERVPQAVKEYFHLDELKGIIKLSKRID 330
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSVPEDIP- 145
+ +++ D ND +P F E ++ E + A + +++ATDAD ++ V Y + D P
Sbjct: 464 LKVQILDENDNSPVFTESTVEITIEENNEPNAFLAKLYATDADSNESGQVSYFLGPDAPS 523
Query: 146 -FVVDANTGDIRTNKALDYEKQQLY 169
F +D+ TG + + LD E+++ Y
Sbjct: 524 YFTLDSVTGILSVSTILDREEKEKY 548
>gi|125719165|ref|NP_536685.2| cadherin EGF LAG seven-pass G-type receptor 3 precursor [Mus
musculus]
gi|341940343|sp|Q91ZI0.2|CELR3_MOUSE RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 3; Flags:
Precursor
Length = 3301
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 84/176 (47%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGP 75
Y A R+ +++V ATDKD GLV Y ++ N+ +F +D T + P
Sbjct: 541 YVAQVREDVRPHTVVLRVTATDKDKDANGLVHYNIISGNSRG--HFAIDSLTGEIQVMAP 598
Query: 76 I--------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ QD G ++T +I+V DIND P F S P++ SV E G
Sbjct: 599 LDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIFVSTPFQVSVLENAPLG 658
Query: 118 LAVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+V + A DAD G+N+ + YS V D PFV+++ TG + + LD E + Y
Sbjct: 659 HSVIHIQAVDADHGENSRLEYSLTGVASDTPFVINSATGWVSVSGPLDRESVEHYF 714
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 56/185 (30%), Positives = 86/185 (46%), Gaps = 32/185 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN---NTDAASYFNLDPAT----- 70
Y R+ E G ++Q++ATD D+ + YR + + T AA+ F +DP +
Sbjct: 429 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGSPAVRTAAAAAFEIDPRSGLIST 488
Query: 71 ------EH------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH QG Q+ G S+T V+I V D ND P+F Y V
Sbjct: 489 SGRVDREHMESYELVVEASDQG--QEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVR 546
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E + V RV ATD D+ N +V+Y++ F +D+ TG+I+ LD+E ++
Sbjct: 547 EDVRPHTVVLRVTATDKDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVMAPLDFEAERE 606
Query: 169 YLERV 173
Y R+
Sbjct: 607 YALRI 611
Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQG 74
+++Q+ ATD+D+ G V+Y N D F ++P + E
Sbjct: 970 SVLQISATDRDAHANGRVQYTF-QNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTA 1028
Query: 75 PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G L + ++ + V D+ND P F + +E V E G V ++ A D D+G
Sbjct: 1029 YAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDDG 1088
Query: 132 QNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE +Q Y+
Sbjct: 1089 PNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYV 1130
Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V+I +TD N P FQS Y S+ E + G V + A+D D G+NA + Y + +++P
Sbjct: 835 VHINITDANTHRPVFQSAHYSVSMNEDRPVGSTVVVISASDDDVGENARITYLLEDNLPQ 894
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DA++G I LDYE Q Y
Sbjct: 895 FRIDADSGAITLQAPLDYEDQVTY 918
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 29/180 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT------- 70
Y + + G ++++V A D D G+ G + Y L N+ + F++DP +
Sbjct: 321 YQTLVPENEAAGTSVLRVVAQDPDPGEAGRLIYSLAALMNSRSLELFSIDPQSGLIRTAA 380
Query: 71 --------EHQGPI--QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
H + QD G LS+T V + V D ND P F+ Y ++ E ++G
Sbjct: 381 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRENVEEG 440
Query: 118 LAVGRVHATDADEGQNAVVYY--------SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ ++ ATD D NA + Y F +D +G I T+ +D E + Y
Sbjct: 441 YPILQLRATDGDAPPNANLRYRFVGSPAVRTAAAAAFEIDPRSGLISTSGRVDREHMESY 500
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEH 72
S Y + +G T++ + A+D D G+ + Y L DN F +D A
Sbjct: 851 SAHYSVSMNEDRPVGSTVVVISASDDDVGENARITYLLEDN----LPQFRIDADSGAITL 906
Query: 73 QGPIQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQD 116
Q P+ E ++ T + R V D+ND P+F + Y V E
Sbjct: 907 QAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAP 966
Query: 117 GL-AVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ++ ATD D N V Y+ D F ++ +G +RT + LD E +Y
Sbjct: 967 PFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVY 1024
Score = 43.5 bits (101), Expect = 0.034, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 70/176 (39%), Gaps = 28/176 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI--------- 76
LG +++ ++A D D G+ +EY L +D F ++ AT GP+
Sbjct: 657 LGHSVIHIQAVDADHGENSRLEYSLTGVASDTP--FVINSATGWVSVSGPLDRESVEHYF 714
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDAD 129
+D G LS++A+V + V D+ND PEF Y + E + V T D
Sbjct: 715 FGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNE-DAAVGTSVVSVTAVD 773
Query: 130 EGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
N+ + Y + G + LDY KQ+ Y + V S A
Sbjct: 774 RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLDY-KQERYFKLVLTASDRA 828
Score = 41.2 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVD 149
+++P+F Y+ VPE + G +V RV A D D G+ + YS+ + F +D
Sbjct: 311 NRHPQFPQYNYQTLVPENEAAGTSVLRVVAQDPDPGEAGRLIYSLAALMNSRSLELFSID 370
Query: 150 ANTGDIRTNKALDYEKQQLYLERV 173
+G IRT ALD E + + RV
Sbjct: 371 PQSGLIRTAAALDRESMERHYLRV 394
Score = 37.4 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 20/154 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPI- 76
+G + Q+ A D D G + Y++++ N + + +LD + I
Sbjct: 1073 VGSVVAQITAVDPDDGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIV 1132
Query: 77 --QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFS--VPEGQDGLA---VGRVHATDAD 129
L S ATV++R+ D ND +P + F+ V D +GR+ A D D
Sbjct: 1133 VQATSAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPD 1192
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALD 162
+ + ++ VV+ +G++R ++ LD
Sbjct: 1193 VSDHLFYSFERGNELQLLVVNRTSGELRLSRKLD 1226
>gi|195470324|ref|XP_002087458.1| GE15963 [Drosophila yakuba]
gi|194173559|gb|EDW87170.1| GE15963 [Drosophila yakuba]
Length = 3556
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 88/182 (48%), Gaps = 31/182 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD----------NNTDAASYFNLDP 68
Y + + ++QV A+D D+G + YR++D +++D + +F + P
Sbjct: 1041 YSVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFP 1100
Query: 69 ATEH---QGPI----QDEGGLSSTATVN------------IRVTDINDKNPEFQSLPYEF 109
+ + P+ +D L AT N +RV D ND +P+FQ YEF
Sbjct: 1101 NSGWIYLRAPLDRETRDRYQLMVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEF 1160
Query: 110 SVPEG-QDGLAVGRVHATDADEGQNAVVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQ 167
+ E + G VG V A+D D G+NA + YS +P + F V TG+I T + LD E ++
Sbjct: 1161 RIEENLRRGSVVGVVTASDLDLGENAAIRYSLLPINSSFQVHPVTGEISTREPLDRELRE 1220
Query: 168 LY 169
LY
Sbjct: 1221 LY 1222
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 81/176 (46%), Gaps = 24/176 (13%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + + G +++QV A D+D G + Y L + A +F +DP T
Sbjct: 508 LYHANVMEVADPGTSVLQVLAHDRDEGLNSALTYSLAETPETHAQWFQIDPQTGLITTRS 567
Query: 71 ---------EHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
I +GG LSSTATV + + D+ND P F Y SV E + G
Sbjct: 568 HIDCETEPVPQLTVIARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVG 627
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
+ +V A+D D G NA+V Y++ E F V + +G+I LD+E++ Y
Sbjct: 628 RCILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEICIAGELDFERRSSY 683
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV----- 140
TVNI + D+ND P F Y +VPE G +V +V+A+D D +N +V Y++
Sbjct: 271 TVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQS 330
Query: 141 PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ F +D TG I NKALD+E ++L+
Sbjct: 331 DKEQMFRIDPRTGAIYINKALDFETKELH 359
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 78/168 (46%), Gaps = 33/168 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI---------- 76
G + V A+D D G+ + Y LL N S F + P T + P+
Sbjct: 1169 GSVVGVVTASDLDLGENAAIRYSLLPIN----SSFQVHPVTGEISTREPLDRELRELYDL 1224
Query: 77 ----QDEGGLSSTATVNIR--VTDINDKNPEFQSLPYE--FSVPEGQD-GLAVGRVHATD 127
+D+G +A V +R V+D+ND PE P E SV E Q G V RV A D
Sbjct: 1225 VVEARDQGTPVRSARVPVRIHVSDVNDNAPEIAD-PQEDVVSVREEQPPGTEVVRVRAVD 1283
Query: 128 ADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
D GQNA + YS+ + F +D ++G IRT LD+E++ +Y
Sbjct: 1284 RDHGQNASITYSIVKGRDSDGHGLFSIDPSSGVIRTRVVLDHEERSIY 1331
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 72/164 (43%), Gaps = 28/164 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------------HQGPIQ--- 77
++ V ATD DSG FG V YR++ N A F +D +T P+
Sbjct: 739 IVAVVATDPDSGNFGQVSYRIVAGN--EAGIFRIDRSTGEIFVARPDMLSVRTQPMHMLN 796
Query: 78 ----DEGGLSSTA--TVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADE 130
D G L S A V + + D + P F+ Y + V E G VG V A D
Sbjct: 797 ISATDGGNLRSNADAVVFLSIIDAMQRPPIFEKARYNYYVKEDIPRGTVVGSVIAASGDI 856
Query: 131 GQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYE-KQQLYL 170
+ V YS+ P F ++ N+G+IR K LD+E K Q+ L
Sbjct: 857 AHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHEAKSQVLL 900
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
VNI V D+ND PEF++ SVPE + G + HA D D G + V YS+ D
Sbjct: 917 VNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVSYSLVGDSGK 976
Query: 146 --FVVDANTGDIRTNKALDYEKQQLY 169
F +DA +G + ++ LDYE Q +
Sbjct: 977 RLFAIDARSGHLILSQHLDYESSQRH 1002
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 25/166 (15%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY--------------RLLDNNTDA 60
D FY + +G +++V A+D D G +V Y R
Sbjct: 612 DQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTIGEGFKHLTEFEVRSASGEICI 671
Query: 61 ASYFNLDPATEHQGPI--QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV------P 112
A + + + ++ P+ D GGLS+TA + +++TD+ND P F Y+ S+ P
Sbjct: 672 AGELDFERRSSYEFPVLATDRGGLSTTAMIKMQLTDVNDNRPVFYPREYKVSLRESPKAP 731
Query: 113 EGQDGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
+ V ATD D G V Y + E F +D +TG+I
Sbjct: 732 TQASSTPIVAVVATDPDSGNFGQVSYRIVAGNEAGIFRIDRSTGEI 777
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L++ A + I + D ND +P+F + +V EG + G V +VHA D+D G NA + Y +
Sbjct: 2302 LATYAELVIELEDENDNSPKFSQKQFAATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHI 2361
Query: 141 PE---DIPFVVD-ANTGDIRTNKALDYEKQQLYLERVF 174
+ D FV++ A +G +RTN LD E + +Y ++
Sbjct: 2362 VDGNHDNAFVIEPAFSGIVRTNIVLDREIRDIYKLKII 2399
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 80/192 (41%), Gaps = 50/192 (26%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y ++ LG +++Q+ A D D G V RL+ ++L T+ Q I
Sbjct: 1957 YTGSVQEDAPLGTSVLQINAVDADLG----VNARLV---------YSLANETQWQFAIDS 2003
Query: 79 EGGL------------------------------SSTATVNIRVTDINDKNPEFQSLPYE 108
+ GL S+T V I V DIND P F+ PY
Sbjct: 2004 QSGLITTVGKLDRELQASYNFMVLAMDGGRYEVRSATVPVQINVLDINDNRPVFERYPYI 2063
Query: 109 FSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPED-----IPFVVDANTGDIRTNKALD 162
VP Q G + +V A DAD G NA + YS+ + F ++ +TG + +++L
Sbjct: 2064 GQVPALIQPGQTLLKVQALDADLGANAEIVYSLNAENSAVSAKFRINPSTGALSASQSLA 2123
Query: 163 YEKQQ-LYLERV 173
E + L+LE +
Sbjct: 2124 SESGKLLHLEVI 2135
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L ++ ++ +R+TD+ND PEF+ Y +V E D G +V +V A D DEG N+ + YS+
Sbjct: 484 LHASKSIFLRITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAHDRDEGLNSALTYSL 543
Query: 141 PEDIP-----FVVDANTGDIRTNKALDYEKQ 166
E F +D TG I T +D E +
Sbjct: 544 AETPETHAQWFQIDPQTGLITTRSHIDCETE 574
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 22/145 (15%)
Query: 18 FYGAMAR----DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN------TDAAS----- 62
F +M R + ELG L A DKDSG G V Y L+ ++ DA S
Sbjct: 931 FEASMVRISVPESAELGAPLYAAHAHDKDSGSSGQVSYSLVGDSGKRLFAIDARSGHLIL 990
Query: 63 --YFNLDPATEHQGPIQDEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ + + + H + G LS+ T+ + V D+ND P F+ Y +V E +
Sbjct: 991 SQHLDYESSQRHSLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKEEYSVNVSESRS 1050
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV 140
+ +V+A+D D G NA + Y +
Sbjct: 1051 INAQIIQVNASDLDTGNNARITYRI 1075
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 86 ATVNIRVTDINDKNPEFQ-SLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
AT+ I V D+ND +PEF+ Y SVPE + + V A+D DEG NA + YS+
Sbjct: 1831 ATIYITVGDVNDNSPEFRPGSCYGLSVPENSEPGVIHTVVASDLDEGPNADLIYSITGGN 1890
Query: 143 -DIPFVVDANTGDIRTNKALDYEKQQLY 169
F +D+++G++ + + LD E+ Y
Sbjct: 1891 LGNKFSIDSSSGEL-SARPLDREQHSRY 1917
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 61/148 (41%), Gaps = 27/148 (18%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLD----PATEHQGPIQDEGGLSSTATVNIRVTDI 95
D+ SG LV RLLD + S F L+ T P SS TV I V D+
Sbjct: 1429 DRHSGN--LVVARLLDR--EVQSEFRLEIRALDTTATNNP------QSSAITVKIEVADV 1478
Query: 96 NDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP--------- 145
ND PE+ P + V E G + ATDAD G N + Y + P
Sbjct: 1479 NDNAPEWPQDPIDLQVSEATPVGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQA 1538
Query: 146 ---FVVDANTGDIRTNKALDYEKQQLYL 170
F +D+ TG + LD+E Q YL
Sbjct: 1539 MTLFSMDSLTGSLSLQAPLDFETVQEYL 1566
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 19/101 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------- 71
Y A + +G +++QV A+D D+ + GLVEY + +D F +DP T
Sbjct: 291 YFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDPRTGAIYINKA 350
Query: 72 --------HQGPI----QDEGGLSSTATVNIRVTDINDKNP 100
H+ + E L +TA V+IRVTD+ND P
Sbjct: 351 LDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQP 391
Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 25/157 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--FNLDPAT---------------- 70
+G ++ + A+D D G FG + Y + +D +S+ F +D T
Sbjct: 2877 VGSSVFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSETGLVTSAFVFDYEQRQR 2936
Query: 71 -EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG---QDGLAVGRVHAT 126
+ + D GG + V + + ++ P+F Y F +P G VG+V AT
Sbjct: 2937 YDMELLASDMGGKKAGVAVRVEIESRDEFTPQFTERTYRFVLPAAVALPQGYVVGQVTAT 2996
Query: 127 DADEGQNAVVYY--SVPEDIPFVVDANTGDIRTNKAL 161
D+D G + V Y S P F V+ ++G + + L
Sbjct: 2997 DSDSGPDGRVVYQLSAPHS-HFKVNRSSGAVLIKRKL 3032
Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 40/183 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
+ A + + G + QV A D D+G + Y ++D N D A F ++PA G ++
Sbjct: 2327 FAATVSEGNNKGTFVAQVHAFDSDAGSNARLRYHIVDGNHDNA--FVIEPA--FSGIVRT 2382
Query: 78 -------------------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEF-SVPEGQ 115
DEG ++ TAT+ +++ D+ND P F P +V E
Sbjct: 2383 NIVLDREIRDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTFP--PNNLVTVSEAT 2440
Query: 116 D-GLAVGRVHATDADE--------GQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQ 166
+ G + + A D D G ++ V + F +D +G + + LDYE Q
Sbjct: 2441 ELGAVITSISANDVDTYPALTYRLGADSTV--DIENMSIFALDRYSGKLVLKRRLDYELQ 2498
Query: 167 QLY 169
Q Y
Sbjct: 2499 QEY 2501
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI 144
+ I V D ND P F+ Y SV E G +V +++A DAD G NA + YS+ +
Sbjct: 1936 CNITIFVEDQNDNAPRFKLSKYTGSVQEDAPLGTSVLQINAVDADLGVNARLVYSLANET 1995
Query: 145 --PFVVDANTGDIRTNKALDYEKQQLY 169
F +D+ +G I T LD E Q Y
Sbjct: 1996 QWQFAIDSQSGLITTVGKLDRELQASY 2022
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 16/126 (12%)
Query: 54 LDNNTDAASYFNLDPA--TEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
LD ++ A SY + A + HQ P L S + + D ND +P+F Y +
Sbjct: 2818 LDYDSGAKSYELIIRACDSHHQRP------LCSLQPFRLELHDENDNDPKFPLSEYVHFL 2871
Query: 112 PEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIP----FVVDANTGDIRTNKALDY 163
E + G +V R HA+D D+G + YS+ P D F VD+ TG + + DY
Sbjct: 2872 AENEPVGSSVFRAHASDLDKGPFGQLNYSIGPAPSDESSWKMFRVDSETGLVTSAFVFDY 2931
Query: 164 EKQQLY 169
E++Q Y
Sbjct: 2932 EQRQRY 2937
Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 85/196 (43%), Gaps = 37/196 (18%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT---------EHQ 73
R++ G +++V+A D+D G+ + Y ++ ++D F++DP++ +H+
Sbjct: 1267 REEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGLFSIDPSSGVIRTRVVLDHE 1326
Query: 74 -------GPIQDEGGLSSTATVN---IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGR 122
G +GG TV + V D+ND P F S F V E G VG
Sbjct: 1327 ERSIYRLGVAASDGGSPPRETVRMLRVEVLDLNDNRPTFTSSSLVFRVREDAALGHVVGS 1386
Query: 123 VHATD--ADEGQNAV--------VYYSVPE------DIPFVVDANTGDIRTNKALDYEKQ 166
+ + AD +N+V V Y++ + F +D ++G++ + LD E Q
Sbjct: 1387 ISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNLVVARLLDREVQ 1446
Query: 167 QLYLERVFLISKFATS 182
+ + + AT+
Sbjct: 1447 SEFRLEIRALDTTATN 1462
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 70/172 (40%), Gaps = 39/172 (22%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLL-------DNNTDAASYFNLDPAT---EHQGPIQD 78
+G + ATD D+G G ++YRL+ ++ A + F++D T Q P+
Sbjct: 1500 VGTIIHNFTATDADTGTNGDLQYRLIRYFPQLNESQEQAMTLFSMDSLTGSLSLQAPLDF 1559
Query: 79 EG-------------------GLSSTATVNIRVTDINDKNPEFQS------LPYEFSVPE 113
E L ++ TV +RV D ND P+F S S+ +
Sbjct: 1560 ETVQEYLLIVQALDQSSNVTERLQTSVTVRLRVLDANDNAPQFVSPNSSGGKTASLSISD 1619
Query: 114 G-QDGLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKAL 161
+ G V + A D D G N + Y + + F +++ TG I K+L
Sbjct: 1620 ATRIGEVVAHIVAVDRDSGDNGRLTYEITGGNGEGRFRINSQTGIIELVKSL 1671
>gi|330370538|gb|AEC12441.1| putative cadherin 1 [Oscarella carmela]
Length = 1668
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPED- 143
A+++I V+DIN+ NP F SL Y + E G V +V ATDADEG N VV Y V D
Sbjct: 280 ASLDINVSDINNNNPTFDSLLYSGKIAENNAVGAVVLKVEATDADEGTNGVVRYFVSADT 339
Query: 144 -IPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
+PFV+D+ +G + LD+E Q+ Y+ +++
Sbjct: 340 PVPFVIDSVSGVVSATAVLDFETQEDYVFKIY 371
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
+G +S+ +V + + DIND PE + + E + V +V ATD D G N ++ Y
Sbjct: 480 DGLFTSSTSVTVNLDDINDVAPELELISDERIFENVANSTFVVQVSATDEDIGANKIIRY 539
Query: 139 SVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
S+ P F +D +G+I N LDYE Y
Sbjct: 540 SLSGQRPAEAFRIDPVSGEIFVNSTLDYESVPRY 573
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
Y ++ LGV L+ V A D DSG FG V Y LD +D F++DP + G
Sbjct: 21 LYVTSKKENVGLGVDLLNVSANDADSGAFGAVRYS-LDPTSDT---FDVDPMSALDG--- 73
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQ 103
GG + A + I + D+ND +P FQ
Sbjct: 74 --GGDAGFADLVITIGDVNDNDPIFQ 97
>gi|195120792|ref|XP_002004905.1| GI19343 [Drosophila mojavensis]
gi|193909973|gb|EDW08840.1| GI19343 [Drosophila mojavensis]
Length = 3570
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 83/183 (45%), Gaps = 28/183 (15%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------- 68
Y A + +G +++QV A+D D G G ++Y L D + + S F +DP
Sbjct: 1008 LYQASILEDALVGTSVIQVSASDPDIGLNGRIKYLLSDRDVEDGS-FVIDPTSGTIRTNK 1066
Query: 69 -------ATEHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
AT H I + G LSST V IR+ D+ND P F S VPE G
Sbjct: 1067 GLDRESVATYHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVG 1126
Query: 118 LAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIR----TNKALDYEKQQLYL 170
VG +HA D DEG NAVV+YS+ + F + G R T LDYE +
Sbjct: 1127 SVVGEIHAHDPDEGVNAVVHYSIIGGDDSNSFSLVTRPGSERAQLLTMTELDYESSRKRF 1186
Query: 171 ERV 173
E V
Sbjct: 1187 ELV 1189
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY---FNLDPATEH--- 72
Y A + +G T++ V ATD D G + Y L + + + S F ++P T
Sbjct: 899 YSAPVFEDAPVGTTVLVVSATDSDVGINAQITYSLNEESINGLSSPDPFTINPQTGAIIT 958
Query: 73 QGPIQDE-------------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
P+ E GG LS T V I VTD+ND P F++ Y+ S+ E
Sbjct: 959 SAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEISVTDVNDNAPAFKNPLYQASILEDAL 1018
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G +V +V A+D D G N + Y + ED FV+D +G IRTNK LD E Y
Sbjct: 1019 VGTSVIQVSASDPDIGLNGRIKYLLSDRDVEDGSFVIDPTSGTIRTNKGLDRESVATY 1076
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 77/165 (46%), Gaps = 25/165 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------- 76
T+ ++ATD D G + Y ++ NT S F++D + +
Sbjct: 599 TVAHIRATDADQGNNAAIRYAIIGGNTQ--SQFSIDSMSGDVSLVKPLDYESVRSYRLVI 656
Query: 77 --QDEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
QD G S + T + V D ND P F + ++ SV E G + RV A D+DEG
Sbjct: 657 RAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEG 716
Query: 132 QNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA + YS+ E + P VDA TG ++T K LD E+Q + +V
Sbjct: 717 ANAEISYSISERDDNFPLAVDARTGWVQTIKPLDREEQNRFAFQV 761
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 36/186 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL-------------------LDNNT- 58
+ A R+ +G T++ ++ATD+D GK +EY + +D+ +
Sbjct: 468 FEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGLGAAQDQEMPIFRIDSRSG 527
Query: 59 ----------DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYE 108
+A+ ++L Q E ++TA+V +++ D ND P+F Y
Sbjct: 528 VISTRSSLDREASDSYHLLVTASDMAAAQSERK-TATASVMVKILDDNDNYPQFSERTYT 586
Query: 109 FSVPEGQ--DGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDY 163
VPE Q D V + ATDAD+G NA + Y++ F +D+ +GD+ K LDY
Sbjct: 587 VQVPEDQWGDDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLVKPLDY 646
Query: 164 EKQQLY 169
E + Y
Sbjct: 647 ESVRSY 652
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 56/104 (53%), Gaps = 13/104 (12%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD---GLAVGRVHATDADEGQNA 134
D GG S TATV+I +TD N+ P F++ PY S P +D G V V ATD+D G NA
Sbjct: 870 DSGGRSDTATVHINITDANNFAPIFENAPY--SAPVFEDAPVGTTVLVVSATDSDVGINA 927
Query: 135 VVYYSVPEDI--------PFVVDANTGDIRTNKALDYEKQQLYL 170
+ YS+ E+ PF ++ TG I T+ LD E YL
Sbjct: 928 QITYSLNEESINGLSSPDPFTINPQTGAIITSAPLDRETTSGYL 971
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
S T T+ + V D ND +P F++ +E S+ EG G V + ATD D G+NA + Y +
Sbjct: 444 SGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIE 503
Query: 142 -----------EDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+++P F +D+ +G I T +LD E Y
Sbjct: 504 AVTDGLGAAQDQEMPIFRIDSRSGVISTRSSLDREASDSY 543
Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 81/165 (49%), Gaps = 25/165 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL--LDNN----TDAASYF-----NLDPATEHQGPIQ 77
+G +++V+A D D G + Y + D+N DA + + LD +++ Q
Sbjct: 701 VGYNIIRVQAYDSDEGANAEISYSISERDDNFPLAVDARTGWVQTIKPLDREEQNRFAFQ 760
Query: 78 ---DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADE 130
+GG+ S++++V I V D+ND +P F YE +V E Q G V V ATD DE
Sbjct: 761 VVAKDGGVPPKSASSSVVITVQDVNDNDPSFNPKYYEANVGEDQPPGTPVTTVTATDPDE 820
Query: 131 GQNAVVYYSVPEDIP---FVVDANTGD--IRTNKALDYEKQQLYL 170
++ ++Y + F + + G I + LDY++++ +L
Sbjct: 821 --DSRLHYEISTGNTRGRFAITSQNGRGLITIAQPLDYKQEKRFL 863
>gi|47227865|emb|CAG09028.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1753
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 83/163 (50%), Gaps = 24/163 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI------------- 76
L ++A D+DSGK G++ Y++ D++ F+LD + P+
Sbjct: 1005 LFTLRANDQDSGKSGIINYKITVG--DSSGDFHLDKLSGVLSTSRPLDREVRARYMLTVT 1062
Query: 77 -QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
QD+G LSSTATV + V DIND +P+F+S Y +PE G V V ATD D+G
Sbjct: 1063 AQDQGHPPLSSTATVEVSVLDINDHSPQFESSAYTADIPEDIPIGSHVLDVKATDLDQGP 1122
Query: 133 NAVVYY--SVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
N+ V Y S F++D +TG I T LD EK Y +V
Sbjct: 1123 NSRVLYFLSSSSHSSFIIDQDTGSIITAAPLDREKIASYTFKV 1165
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 77/171 (45%), Gaps = 32/171 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------------ 70
+G + VKATD D G+ G V YR+ NT F+L+P T
Sbjct: 795 VGFVALYVKATDADEGENGRVTYRIQSGNTGGK--FSLNPNTGSLSILKPLDREEQDIFN 852
Query: 71 ------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRV 123
+H P Q SS + + V D+ND+ P F+ YE V E Q G +V V
Sbjct: 853 LTITAEDHGMPQQ-----SSAQLLCVHVIDVNDEVPWFEETQYEAQVSENQPSGTSVLTV 907
Query: 124 HATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
A+D D G N V YS + F ++ TG I T KALD E ++ Y V+
Sbjct: 908 SASDLDLGPNGQVTYSGISEEDFNINPVTGVITTTKALDRELREYYTVTVY 958
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 75/177 (42%), Gaps = 33/177 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y A + G +++ V A+D D G G V Y + FN++P T G I
Sbjct: 890 YEAQVSENQPSGTSVLTVSASDLDLGPNGQVTYSGISEED-----FNINPVT---GVITT 941
Query: 78 ------------------DEGGLS---STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+GGL + ATV IRV D ND P F L Y VPE +
Sbjct: 942 TKALDRELREYYTVTVYAKDGGLPPNYAKATVRIRVLDENDNTPYFGRLYYSIEVPENLE 1001
Query: 117 GLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ + + A D D G++ ++ Y + F +D +G + T++ LD E + Y+
Sbjct: 1002 AMPLFTLRANDQDSGKSGIINYKITVGDSSGDFHLDKLSGVLSTSRPLDREVRARYM 1058
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 74/170 (43%), Gaps = 32/170 (18%)
Query: 11 EMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT 70
T D +F ++ G V A D+D+G G + YRLL + +F ++P T
Sbjct: 354 RFTQDRVFMAV--KENLPAGTGFGHVSAADRDAGPNGRLSYRLLHPD----RHFQINPHT 407
Query: 71 -----------EHQGP------IQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYE--- 108
E Q +QD G S+T T I V D ND +P F P
Sbjct: 408 GEMSTKTVLDREQQSSYQLVVLVQDGGSPPRSATGTAFITVLDDNDNDPAFTHSPSGKKL 467
Query: 109 -FSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGD 154
V E Q G+ VG + A D DEG+N V+YS+ P F ++ N+G+
Sbjct: 468 ILQVTESQSSGVLVGTLQAKDPDEGENGTVFYSLIGPRADRFSLNPNSGE 517
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE 142
S+ T + +TD ND P F+S P SV E Q G V ATDADEG+N V Y +
Sbjct: 763 SSVTARVYITDENDNPPVFRS-PASVSVMEDQPVGFVALYVKATDADEGENGRVTYRIQS 821
Query: 143 DI---PFVVDANTGDIRTNKALDYEKQQLY 169
F ++ NTG + K LD E+Q ++
Sbjct: 822 GNTGGKFSLNPNTGSLSILKPLDREEQDIF 851
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATD 127
AT+ G ++ G +ATV + +TD ND +P F +V E G G V A D
Sbjct: 326 ATQGHGQLKKTG----SATVRVSLTDENDNSPRFTQDRVFMAVKENLPAGTGFGHVSAAD 381
Query: 128 ADEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLY 169
D G N + Y + D F ++ +TG++ T LD E+Q Y
Sbjct: 382 RDAGPNGRLSYRLLHPDRHFQINPHTGEMSTKTVLDREQQSSY 424
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 25/173 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL-------------LDNNTDAASYFN 65
Y A R+ ++QV A D D G+ G V Y L L + A+ +
Sbjct: 1408 YVAYIREAQGYDFPIIQVAAVDLDQGQNGQVIYSLRSSSRSGLFKIDPLTGSITTAAIMD 1467
Query: 66 LDPATEHQGPIQ--DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAV 120
+ TE + + D G L+ +AT+ + +TD+ND +P LP E VPE G +
Sbjct: 1468 REIWTETKLVVTATDRGTPRLAGSATLTVIITDLNDNSPMI-PLPQEIHVPENTLIGTVI 1526
Query: 121 GRVHATDADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
RV D D G ++Y++ D+ F + G + LDYE++ Y
Sbjct: 1527 TRVTGNDVDSG--PALFYTLNLDVNSQDMFGIHRYGGGVSLTGPLDYEERTWY 1577
Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 88 VNIRVTDINDKNPEFQSLPYE-FSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV--PED 143
V+I +TDIND P F YE +PE + G V RV A D D G N + + + P
Sbjct: 125 VHISITDINDNPPVFSPSSYESLLLPEPTEMGTVVYRVQAEDQDSGANGQLSFDLYSPSG 184
Query: 144 I--PFVVDANTGDIRTNKALDYEKQQLY 169
F +D ++G+IR +L YE Y
Sbjct: 185 TQRSFSIDRSSGEIRLVGSLRYESTPRY 212
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY--- 138
SS VNI + D+ND P FQ Y + E Q + +V A D D+GQN V Y
Sbjct: 1384 SSYMAVNIILQDVNDNLPRFQLQNYVAYIREAQGYDFPIIQVAAVDLDQGQNGQVIYSLR 1443
Query: 139 SVPEDIPFVVDANTGDIRTNKALDYE 164
S F +D TG I T +D E
Sbjct: 1444 SSSRSGLFKIDPLTGSITTAAIMDRE 1469
Score = 38.9 bits (89), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 70/164 (42%), Gaps = 32/164 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDA------------ASYFNLD 67
+G ++ VKATD D G V Y L +D +T + ASY
Sbjct: 1106 IGSHVLDVKATDLDQGPNSRVLYFLSSSSHSSFIIDQDTGSIITAAPLDREKIASYTFKV 1165
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHAT- 126
AT+ P+ +STA V I V D+ND P F P +V G ++ RV AT
Sbjct: 1166 CATD-SSPLNPR---NSTAEVTISVQDVNDNAPFFIQDPLIVNVSIGS--VSSRRVLATM 1219
Query: 127 ---DADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQ 166
D D G N V+Y + F +++ TGDI+ + L Q
Sbjct: 1220 RAEDKDFGANGSVFYRFANPVKGFTINSLTGDIQATEKLQSLSQ 1263
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 72/197 (36%), Gaps = 28/197 (14%)
Query: 4 CPIPSALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY 63
P+P + + ++L +G + +V D DSG L N+ D
Sbjct: 1508 IPLPQEIHVPENTL-----------IGTVITRVTGNDVDSGPALFYTLNLDVNSQDMFGI 1556
Query: 64 FNLDPATEHQGPIQDEGGLSSTATVN-------------IRVTDINDKNPEFQSLPYEFS 110
GP+ E T TV+ + V D+ND P F Y+ +
Sbjct: 1557 HRYGGGVSLTGPLDYEERTWYTVTVSTSDSKHHSEANLTVLVDDVNDNAPTFTQDMYQVT 1616
Query: 111 VPEG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRT-NKALDYEKQ 166
V E G AV V ATD D G N + Y V F +D + G++ + K + +
Sbjct: 1617 VAEHLPAGSAVVTVTATDRDSGDNGKIIYRVMSSTKGIFYIDPSNGNVLSIRKFCNVNIR 1676
Query: 167 QLYLERVFLISKFATSY 183
LY+ V T +
Sbjct: 1677 YLYIYCVLFFIHTGTLF 1693
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQ-NAVVYYSV 140
S+ +NI V D ND P+F P +PE + G +V ATD D + N+ + YS+
Sbjct: 651 STLVHLNIEVEDSNDHAPQFPEDPITVVIPESMESGSSVYTFQATDKDGSEANSELSYSI 710
Query: 141 PEDIP-----FVVDANTGDIRTNKALDYE 164
P +D++TG + + LD+E
Sbjct: 711 LHQWPSAHGLLSLDSSTGVLSIAQKLDHE 739
Score = 36.2 bits (82), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 67/168 (39%), Gaps = 38/168 (22%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------------------- 68
GV + ++A D D G+ G V Y L+ D F+L+P
Sbjct: 478 GVLVGTLQAKDPDEGENGTVFYSLIGPRADR---FSLNPNSGELHSSSALSHSERAEYSL 534
Query: 69 ---ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF-SVPEGQDGLAVGRVH 124
AT+ P + S++ ++ I+V +N P + S F SV + G +G V
Sbjct: 535 MVTATDRGQPPR-----STSCSLTIQVLSMN--RPSYDSHLVTFNSVEQTAPGSIIGSVR 587
Query: 125 ATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ V Y + D FVVD TGD+ + LDYE+ Y
Sbjct: 588 HQGGTSKEGEVTYTVIGGTDRDGTFVVDRLTGDVLLARPLDYEQYSRY 635
>gi|332836068|ref|XP_003313012.1| PREDICTED: protocadherin-16 [Pan troglodytes]
Length = 3305
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 82/162 (50%), Gaps = 28/162 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGP- 75
G +++V A D D G G V Y L +F++DP + E Q
Sbjct: 501 GSFVVRVTARDPDQGTNGQVTYSLAPGAH--THWFSIDPTSGIITTAASLDYELEPQPQL 558
Query: 76 --IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ +GGL +S+ATVN+ + D+ND P+FQ Y S+PEG Q G +V ATDAD
Sbjct: 559 TVVATDGGLPPLASSATVNVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDAD 618
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEK 165
G ++ YS+ + PF +DA++GD+ T + LD ++
Sbjct: 619 SGPFGLLSYSLGAGLGSSGSPPFRIDAHSGDVCTTRTLDRDQ 660
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 78/177 (44%), Gaps = 27/177 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + R+ G +L+ ++ATD D G G V Y + + + F+LDP T
Sbjct: 1666 YSVLLRENSPPGTSLLTLRATDPDVGANGQVTYGGVSSES-----FSLDPDTGVLTTLRA 1720
Query: 71 ---EHQGPI------QDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQDGLA 119
E Q I QD G V +RV D ND P F S VPEGQD
Sbjct: 1721 LDREEQEEIILTVYAQDRGSPPRLTHVTVRVAVEDENDHAPTFGSAHLSLEVPEGQDPQT 1780
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ + A+D D G N + Y + + P FV+D +G+ T + LD E + + R+
Sbjct: 1781 LTMLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQLRI 1837
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 21/147 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNT--DAASYFNLDPAT-----------EHQGPI 76
G + + A D D+G FG + Y LL+ + F L+ +T EH
Sbjct: 2729 GTLVTTLHAIDGDAGAFGRLRYSLLEAGPGPEGREAFALNSSTGELRARVPFDYEHTESF 2788
Query: 77 Q------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ D G LS++ TV++ VT ++ +P F + + F VPEG + G ++G V ATD D
Sbjct: 2789 RLLVGAADAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQVPEGARRGHSLGHVQATDED 2848
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDI 155
G + +V YS+ P F ++ TG +
Sbjct: 2849 GGADGLVLYSLATSSPYFGINQTTGAL 2875
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 64/146 (43%), Gaps = 26/146 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY--------------RLLDNNTDAASY 63
FY A + + G +QV ATD DSG FGL+ Y R+ ++ D +
Sbjct: 594 FYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGSSGSPPFRIDAHSGDVCTT 653
Query: 64 FNLDPATEHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEG 114
LD QGP D GGL S V + ++D ND P+F Y S+ +
Sbjct: 654 RTLD---RDQGPSSFDFTVTAVDGGGLKSMVYVKVFLSDENDNRPQFYPREYAASISAQS 710
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV 140
G AV R+ A D D+G + + Y +
Sbjct: 711 PPGTAVLRLRAHDPDQGSHGRLSYHI 736
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL---------------DPATEHQGPI 76
TL ++A+D D G G ++YR+LD + A +L +PA + +
Sbjct: 1780 TLTMLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQLRIEA 1839
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQN 133
D G LS+T + + V D ND P F Y VPE G + ++ A D D G N
Sbjct: 1840 WDGGQPALSATLLLTVTVLDANDHAPAFPVPAYSVEVPEDVPAGTLLLQLQAHDPDAGAN 1899
Query: 134 AVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSYL 184
V Y + F+++ ++G++RT ALD E+ Y V + A L
Sbjct: 1900 GHVTYYLGAGTAGAFLLEPSSGELRTAAALDREQCPSYTFSVSAVDGAAAGPL 1952
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 28/167 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQ 73
+G L+ V+A+D D G GLV + + ++ D + F LD ++ HQ
Sbjct: 2624 VGAELLHVEASDADPGPHGLVRFTV--SSGDPSGLFELDESSGTLRLAHALDCETQARHQ 2681
Query: 74 GPIQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
+Q G + A V I V D+ND P F S+ E Q G V +HA D D
Sbjct: 2682 LVVQAADPAGAHFALAPVTIEVQDVNDHGPAFPLNLLSTSLAENQPPGTLVTTLHAIDGD 2741
Query: 130 EGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYEKQQLY 169
G + YS+ E P F ++++TG++R DYE + +
Sbjct: 2742 AGAFGRLRYSLLEAGPGPEGREAFALNSSTGELRARVPFDYEHTESF 2788
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 67/158 (42%), Gaps = 30/158 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPI--- 76
G L+Q++A D D+G G V Y L A F L+P++ Q P
Sbjct: 1883 GTLLLQLQAHDPDAGANGHVTYYL---GAGTAGAFLLEPSSGELRTAAALDREQCPSYTF 1939
Query: 77 -------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-----GQDGLAVGRVH 124
G LS+T +V I V D+ND P F + P +P LA+ +
Sbjct: 1940 SVSAVDGAAAGPLSTTVSVTITVRDVNDHAPTFPTSPLRLRLPRPGPSFSTPTLALATLR 1999
Query: 125 ATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKA 160
A D D G NA + Y + P VD+ TG+IR ++
Sbjct: 2000 AEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARS 2037
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 73/167 (43%), Gaps = 32/167 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQ----- 73
G ++QV+A D G + Y L A+S F L+P + E Q
Sbjct: 1028 GTQVLQVQAQAPDGGP---ITYHLAAEG--ASSPFGLEPQSGWLWVRAALDREAQELYIL 1082
Query: 74 ------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
G + G + TATV + + + N+ +P P +V E Q G +VGRV AT
Sbjct: 1083 KVMAVSGSKAELGQQTGTATVRVSILNQNEHSPRLSEDPTFLAVAENQPPGTSVGRVFAT 1142
Query: 127 DADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
D D G N + YS+ + F + TG++ T + LD E+Q Y
Sbjct: 1143 DRDSGPNGRLTYSLQQLSEDSKAFRIHPQTGEVTTLQTLDREQQSSY 1189
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 74/167 (44%), Gaps = 27/167 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYFN-LDP----------- 68
G + V A D D G+ V YRL L ++T A S LD
Sbjct: 1573 GPAALHVVARDPDLGEAARVSYRLASGGDGHFRLHSSTGALSVVRPLDREQRAEHVLTVV 1632
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
A++H P + S+T + + V D+ND+ P FQ Y + E G ++ + ATD
Sbjct: 1633 ASDHGSPPR-----SATQVLTVSVADVNDEAPTFQQQEYSVLLRENSPPGTSLLTLRATD 1687
Query: 128 ADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
D G N V Y F +D +TG + T +ALD E+Q+ + V+
Sbjct: 1688 PDVGANGQVTYGGVSSESFSLDPDTGVLTTLRALDREEQEEIILTVY 1734
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A +++ + DIND P F Y V E G V +V A+DAD G N V Y +
Sbjct: 251 ALLDVTLLDINDHAPAFNQSRYHAVVSESLAPGSPVLQVFASDADAGVNGAVTYEINRRQ 310
Query: 143 ---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D PF +DA+TG ++ + LD+E+++++
Sbjct: 311 SEGDGPFSIDAHTGLLQLERPLDFEQRRVH 340
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 76/176 (43%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------P 68
Y A + G +++++A D D G G + Y +L N+ F LD P
Sbjct: 702 YAASISAQSPPGTAVLRLRAHDPDQGSHGRLSYHILAGNS--PPLFTLDEQSGLLTVAWP 759
Query: 69 ATEHQGPI-------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGL 118
+ QD GGL + +A VNI + P F+ L Y FSVPE G
Sbjct: 760 LARRANSVVQLEIGAQDGGGLQAEPSARVNISIVPGTPTPPIFEQLQYVFSVPEDVAPGT 819
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
+VG V A + G+ A V S+ P F +DA +G ++T + LD E LE
Sbjct: 820 SVGIVQAHNP-PGRLAPVTLSLSGGDPRGLFSLDAVSGLLQTLRPLDRELLGPVLE 874
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 72/172 (41%), Gaps = 29/172 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH----------QGPIQD- 78
G + ++A D DSG V + LL A F +DP T H GP D
Sbjct: 922 GTPIYTLRALDPDSGVNSRVTFTLLAGGGGA---FTVDPTTGHVRLMRPLGPSGGPAHDL 978
Query: 79 -----EGG---LSSTATVNIRVTDINDKN--PEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+GG +S + + V D+ + P F S Y +P G G V +V A
Sbjct: 979 ELEARDGGSPPRTSHFRLRVVVQDVGTRGLAPRFNSPTYRVDLPSGTTAGTQVLQVQAQA 1038
Query: 128 ADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D G + Y+ E PF ++ +G + ALD E Q+LY+ +V +S
Sbjct: 1039 PDGG--PITYHLAAEGASSPFGLEPQSGWLWVRAALDREAQELYILKVMAVS 1088
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 78/172 (45%), Gaps = 35/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G ++ +V ATD+DSG G + Y L + D+ + F + P T E Q
Sbjct: 1133 GTSVGRVFATDRDSGPNGRLTYSLQQLSEDSKA-FRIHPQTGEVTTLQTLDREQQSSYQL 1191
Query: 76 ---IQDEGG--LSSTATVNIRVTDINDKNPEF--------QSLPYEF--SVPEGQDGLAV 120
+QD G S+T TV++ V D+ND +P F LP + VP G V
Sbjct: 1192 LVQVQDGGSPPRSTTGTVHVAVLDLNDNSPTFLQASGAAGGGLPIQVPDRVPPGT---LV 1248
Query: 121 GRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ A D DEG+N + Y++ P F + ++G++ T L ++ Y+
Sbjct: 1249 TTLQAKDPDEGENGTILYTLTGPGSELFSLHPHSGELLTAAPLIRAERPHYV 1300
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 70/180 (38%), Gaps = 39/180 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + L L+QV+A D D G G + Y L + A F++DP
Sbjct: 2188 YVAFLPESRPLEGPLLQVEADDLDQGSGGQISYSLAASQP-ARGLFHVDPTTGTITTTAI 2246
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
AT+ P L +AT+ + V D ND P P+E V E
Sbjct: 2247 LDREIWAETRLVLMATDRGSP-----ALVGSATLTVMVIDTNDNRPTIPQ-PWELRVSED 2300
Query: 114 GQDGLAVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + +V D D G V++Y S P+D PF V G + LD+E+ Y
Sbjct: 2301 ALLGSEIAQVTGNDVDSG--PVLWYVLSPSGPQD-PFSVGRYGGRVSLTGPLDFEQCDRY 2357
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 72/178 (40%), Gaps = 40/178 (22%)
Query: 30 GVTLMQVKATDKDSGK-FGLVEYRLLDNNTDAASYFNLDP----ATEHQGPIQDEGGL-- 82
G TL+ ++ATD D + V+Y ++ N F L+P A E GP G
Sbjct: 2505 GSTLLTLEATDADGSRSHAAVDYSIISGNW--GRVFQLEPRLAEAGESAGPGPRALGCLV 2562
Query: 83 ---------------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
SS V + V D+ND P F Y +VPE
Sbjct: 2563 LLEPLDFESLTQYNLTVAAADRGQPPQSSVVPVTVTVLDVNDNPPVFTRASYRVAVPEDT 2622
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
G + V A+DAD G + +V ++V P F +D ++G +R ALD E Q +
Sbjct: 2623 PVGAELLHVEASDADPGPHGLVRFTVSSGDPSGLFELDESSGTLRLAHALDCETQARH 2680
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 15/93 (16%)
Query: 82 LSSTATVNIRVTDINDKNPEF-------QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
L + A + +TD+ND P F + LP E ++P G V RV A D D+G N
Sbjct: 464 LRAEAAFVLHITDVNDNAPAFDRQLYRPEPLP-EVALP----GSFVVRVTARDPDQGTNG 518
Query: 135 VVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
V YS+ F +D +G I T +LDYE
Sbjct: 519 QVTYSLAPGAHTHWFSIDPTSGIITTAASLDYE 551
Score = 35.8 bits (81), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 56/127 (44%), Gaps = 28/127 (22%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------------ATEHQGP--------IQ 77
TD+DSG G + Y L A F++DP A H G +
Sbjct: 2407 CTDRDSGANGHISYHL----ASPADGFSVDPNNGTLFTIVGTVALGHDGSGAVDVVLEAR 2462
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQ-N 133
D G G ++ ATV++++ D ND P F Y +V E G + + ATDAD + +
Sbjct: 2463 DHGAPGRAARATVHVQLQDQNDHAPSFTLSHYRVAVTEDLPPGSTLLTLEATDADGSRSH 2522
Query: 134 AVVYYSV 140
A V YS+
Sbjct: 2523 AAVDYSI 2529
>gi|149018495|gb|EDL77136.1| cadherin EGF LAG seven-pass G-type receptor 3 [Rattus norvegicus]
Length = 3148
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 85/176 (48%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGP 75
Y A R+ +++V ATDKD GLV Y ++ N+ +F +D T + P
Sbjct: 541 YVAQVREDVRPHTVVLRVTATDKDKDANGLVHYNIISGNSRG--HFAIDSLTGEIQVMAP 598
Query: 76 I--------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ QD G ++T +I+V DIND +P F S P++ SV E G
Sbjct: 599 LDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHSPIFVSTPFQVSVLENAPLG 658
Query: 118 LAVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+V + A DAD G+N+ + YS V D PFV+++ TG + + LD E + Y
Sbjct: 659 HSVIHIQAVDADHGENSRLEYSLTGVASDTPFVINSATGWVSVSGPLDRESVEHYF 714
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 86/185 (46%), Gaps = 32/185 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN---NTDAASYFNLDPAT----- 70
Y R+ E G ++Q++ATD D+ + YR + + T AA+ F +DP +
Sbjct: 429 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGSPAARTAAAAAFEIDPRSGLIST 488
Query: 71 ------EH------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH QG Q+ G S+T V+I V D ND P+F Y V
Sbjct: 489 SGRVDREHMESYELVVEASDQG--QEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVR 546
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E + V RV ATD D+ N +V+Y++ F +D+ TG+I+ LD+E ++
Sbjct: 547 EDVRPHTVVLRVTATDKDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVMAPLDFEAERE 606
Query: 169 YLERV 173
Y R+
Sbjct: 607 YALRI 611
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQG 74
+++Q+ ATD+D+ G V+Y N D F ++P + E
Sbjct: 970 SVLQISATDRDAHANGRVQY-TFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTA 1028
Query: 75 PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G L + ++ + V D+ND P F + +E V E G V ++ A D D+G
Sbjct: 1029 YAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDDG 1088
Query: 132 QNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE +Q Y+
Sbjct: 1089 PNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYV 1130
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V+I +TD N P FQS Y S+ E + G V + A+D D G+NA + Y + +++P
Sbjct: 835 VHINITDANTHRPVFQSAHYSVSMNEDRPVGSTVVVISASDDDVGENARITYLLEDNLPQ 894
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DA++G I LDYE Q Y
Sbjct: 895 FRIDADSGAITLQAPLDYEDQVTY 918
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 29/180 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT------- 70
Y + + G +++V A D D G+ G + Y L N+ + F++DP +
Sbjct: 321 YQTLVPENEAAGTAVLRVVAQDPDPGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 380
Query: 71 --------EH--QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
H + QD G LS+T V + V D ND P F+ Y ++ E ++G
Sbjct: 381 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRENVEEG 440
Query: 118 LAVGRVHATDADEGQNAVVYYSV--------PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ ++ ATD D NA + Y F +D +G I T+ +D E + Y
Sbjct: 441 YPILQLRATDGDAPPNANLRYRFVGSPAARTAAAAAFEIDPRSGLISTSGRVDREHMESY 500
Score = 42.7 bits (99), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEH 72
S Y + +G T++ + A+D D G+ + Y L DN F +D A
Sbjct: 851 SAHYSVSMNEDRPVGSTVVVISASDDDVGENARITYLLEDN----LPQFRIDADSGAITL 906
Query: 73 QGPIQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQD 116
Q P+ E ++ T + R V D+ND P+F + Y V E
Sbjct: 907 QAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAP 966
Query: 117 GL-AVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ++ ATD D N V Y+ D F ++ +G +RT + LD E +Y
Sbjct: 967 PFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVY 1024
Score = 42.4 bits (98), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 73/177 (41%), Gaps = 30/177 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGPI--------- 76
LG +++ ++A D D G+ +EY L +D F ++ AT GP+
Sbjct: 657 LGHSVIHIQAVDADHGENSRLEYSLTGVASDTP--FVINSATGWVSVSGPLDRESVEHYF 714
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDA 128
+D G LS++A+V + V D+ND PEF Y + E G +V V A D
Sbjct: 715 FGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGTSVVSVTAVDR 774
Query: 129 DEGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
D N+ + Y + G + LDY KQ+ Y + V S A
Sbjct: 775 DA--NSAISYQITGGNTRNRFAISTQGGMGLVTLALPLDY-KQERYFKLVLTASDRA 828
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI 144
+T R +++P+F Y+ VPE + G AV RV A D D G+ + YS+ +
Sbjct: 300 STNQARSRRAANRHPQFPQYNYQTLVPENEAAGTAVLRVVAQDPDPGEAGRLVYSLAALM 359
Query: 145 P------FVVDANTGDIRTNKALDYEKQQLYLERV 173
F +D +G IRT ALD E + + RV
Sbjct: 360 NSRSLELFSIDPQSGLIRTAAALDRESMERHYLRV 394
>gi|194758613|ref|XP_001961556.1| GF14875 [Drosophila ananassae]
gi|190615253|gb|EDV30777.1| GF14875 [Drosophila ananassae]
Length = 3563
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 79/175 (45%), Gaps = 30/175 (17%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL-- 82
+ + ++QV A+D D+G + YR++D D + + +H G + G +
Sbjct: 1044 ESRSINTQIIQVNASDLDTGNNARITYRIVDAGVDNVTTSSSSDVAQHFGIFPNSGWIYL 1103
Query: 83 --------------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
+ A V IRV D ND +P+FQ YEF + E +
Sbjct: 1104 RALLDRETRDRYQLTVLATDNGTPAAHAKARVVIRVLDANDNDPKFQRTKYEFRIEENLR 1163
Query: 116 DGLAVGRVHATDADEGQNAVVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G VG V ATD D G+NA V YS + + F V TG+I T + LD E +++Y
Sbjct: 1164 RGSVVGVVTATDLDLGENAAVRYSLLTANSSFQVHPVTGEISTREPLDRELREMY 1218
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 81/176 (46%), Gaps = 24/176 (13%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + + G +++QV A D+D G ++ Y L + A +F +D T
Sbjct: 505 LYHANVMEVADPGTSVLQVLAHDRDEGLNSVISYSLAETPETHAQWFQIDSQTGLITTRS 564
Query: 71 ---------EHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
I +GG LSS+ATV + + D+ND P F Y SV E + G
Sbjct: 565 HIDCETEPVPQLTVIARDGGVPPLSSSATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVG 624
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
+ ++ A+D D G NA+V Y++ E F V + +G+I LD+EK+ Y
Sbjct: 625 RCILKISASDPDCGVNAMVNYTLGEGFKHLTEFEVRSASGEICIAGELDFEKRSSY 680
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 79/168 (47%), Gaps = 33/168 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI---------- 76
G + V ATD D G+ V Y LL N S F + P T + P+
Sbjct: 1165 GSVVGVVTATDLDLGENAAVRYSLLTAN----SSFQVHPVTGEISTREPLDRELREMYEL 1220
Query: 77 ----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYE--FSVPEGQD-GLAVGRVHATD 127
+D+G S+ V+IRVTD+ND +PE P E SV E Q G V R+ A D
Sbjct: 1221 IVEARDQGTPVRSARVPVSIRVTDVNDNSPEIAD-PQEDVVSVREEQPPGTEVVRIRAID 1279
Query: 128 ADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
D GQNA + YS+ + F +D TG IRT LD+E++ +Y
Sbjct: 1280 RDNGQNASITYSIVKGRDSDGHGLFSIDPKTGMIRTRVVLDHEERSIY 1327
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 75/164 (45%), Gaps = 28/164 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQGP 75
++ V ATD DSG FG V YR++ N A F +D ++ H
Sbjct: 736 VVAVVATDPDSGTFGKVSYRIVSGND--AGIFRIDRSSGEIFVARPDMLSVRAQPTHMLN 793
Query: 76 IQ--DEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADE 130
I D GL SS A V + + D + P F+ Y + V E G VG V AT D
Sbjct: 794 ISAIDGAGLRSSSDAVVFLSIIDAMQRPPIFEKARYNYYVKEDIPRGTVVGSVIATSGDT 853
Query: 131 GQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYE-KQQLYL 170
+ + YS+ P F ++AN+G+IR K LD+E K Q+ L
Sbjct: 854 AHRSPMRYSIYSGDPDGYFSIEANSGNIRIAKPLDHEAKSQVLL 897
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV----- 140
TVNI + D+ND P F Y +VPE G +V +V+A+D D +N +V Y++
Sbjct: 268 TVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQS 327
Query: 141 PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ F +D TG I NK LD+E ++L+
Sbjct: 328 DKEKMFRIDPRTGAIYINKPLDFETKELH 356
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
VNI V D+ND PEF++ SVPE + G + HA D D G + V YS+ D
Sbjct: 914 VNIEVEDVNDNAPEFETNMVRISVPENAELGAPLYAAHAHDRDSGSSGQVTYSLARDSGK 973
Query: 146 --FVVDANTGDIRTNKALDYEKQQLY 169
F +DA +G + + LDYE Q +
Sbjct: 974 RLFSIDARSGHLVLSHHLDYETSQRH 999
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Query: 73 QGPIQDEGGLSSTATVNIRVTDINDKNPEFQ-SLPYEFSVPEGQDGLAVGRVHATDADEG 131
+GP EG ATV + + D+ND PEF+ Y SVPE + + V A D DEG
Sbjct: 1820 EGP---EGQHFDVATVQVTIEDVNDNAPEFRPGSCYGLSVPENTEPGVIHTVVAIDLDEG 1876
Query: 132 QNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA + YS+ F +DA +G++R + LD E+ Y +V
Sbjct: 1877 PNADLVYSIAAGNLGNKFSIDARSGELRV-QPLDREQHSRYTLQV 1920
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L ++ ++ +++TD+ND PEF+ Y +V E D G +V +V A D DEG N+V+ YS+
Sbjct: 481 LHASKSIFLKITDVNDNPPEFEQDLYHANVMEVADPGTSVLQVLAHDRDEGLNSVISYSL 540
Query: 141 PEDIP-----FVVDANTGDIRTNKALDYEKQ 166
E F +D+ TG I T +D E +
Sbjct: 541 AETPETHAQWFQIDSQTGLITTRSHIDCETE 571
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 28/170 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--FNLDPAT---------------- 70
+G ++ + +A+D D G FG + Y + +D +S+ F +DP T
Sbjct: 2884 VGSSVFRAQASDLDRGPFGQLNYSIGPAPSDESSWKLFRVDPVTGLMTSDAVFDYEQRQR 2943
Query: 71 -EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG---QDGLAVGRVHAT 126
+ Q D GG + V I + ++ P+F Y F +P G VG+V AT
Sbjct: 2944 YDLQLEASDMGGKKARVGVRIEIESKDEFAPQFTERTYRFVLPAAVALPQGFVVGQVTAT 3003
Query: 127 DADEGQNAVVYY--SVPEDIPFVVDANTGDIRTNKALDYEKQQ---LYLE 171
D D G + V Y S P F V+ ++G I + + + +YL+
Sbjct: 3004 DGDSGPDGRVVYQLSAPHS-NFKVNRSSGAILIKRKFKLDSDRDGNMYLD 3052
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 25/166 (15%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY--------------RLLDNNTDA 60
D FY + +G ++++ A+D D G +V Y R
Sbjct: 609 DQSFYNVSVAENEPVGRCILKISASDPDCGVNAMVNYTLGEGFKHLTEFEVRSASGEICI 668
Query: 61 ASYFNLDPATEHQGPI--QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE----- 113
A + + + ++ P+ D GGLS+TA + +++TD+ND P F Y S+ E
Sbjct: 669 AGELDFEKRSSYEFPVIATDRGGLSTTAMIKMQLTDVNDNRPVFYPREYNVSLKESSQSP 728
Query: 114 -GQDGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
V V ATD D G V Y + + F +D ++G+I
Sbjct: 729 AQSSSAPVVAVVATDPDSGTFGKVSYRIVSGNDAGIFRIDRSSGEI 774
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 19/101 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------- 71
Y A + +G +++QV A+D D+ + GLVEY + +D F +DP T
Sbjct: 288 YFATVPENATVGTSVLQVYASDTDADENGLVEYAINRRQSDKEKMFRIDPRTGAIYINKP 347
Query: 72 --------HQGPI----QDEGGLSSTATVNIRVTDINDKNP 100
H+ + E L +TA V+IRVTD+ND P
Sbjct: 348 LDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQP 388
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 53/93 (56%), Gaps = 5/93 (5%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L++ A + + + D ND +P+F + +V EG + G V +V A DAD G NA + Y +
Sbjct: 2308 LAAYAELVVELEDENDNSPQFSQRKFVATVSEGNNKGTFVAQVQAFDADAGANARLRYHI 2367
Query: 141 PE---DIPFVVD-ANTGDIRTNKALDYEKQQLY 169
+ D F+++ A +G ++TN LD E + +Y
Sbjct: 2368 VDGNHDNAFIIEPAFSGIVKTNIVLDREIRDIY 2400
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 25/157 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNN------TDAAS-----YFNLDPATEHQGPI 76
ELG L A D+DSG G V Y L ++ DA S +LD T + +
Sbjct: 942 ELGAPLYAAHAHDRDSGSSGQVTYSLARDSGKRLFSIDARSGHLVLSHHLDYETSQRHTL 1001
Query: 77 ---QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
+GG LSS T+ + V D+ND P F+ Y +V E + + +V+A+D D
Sbjct: 1002 TVTATDGGIPPLSSNLTILLDVQDVNDNPPVFEREEYFVNVSESRSINTQIIQVNASDLD 1061
Query: 130 EGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQ 166
G NA + Y +VDA ++ T+ + D +
Sbjct: 1062 TGNNARITYR-------IVDAGVDNVTTSSSSDVAQH 1091
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
S++ V I V D+ND P F+ PY V P Q G + +V A D D G N V YS+
Sbjct: 2037 SASVPVQIHVLDVNDNRPVFERYPYLGKVAPLIQPGQTLLKVQAHDEDLGANGEVTYSLK 2096
Query: 142 EDI-----PFVVDANTGDIRTNKALDYEKQQL 168
D F ++ +TG + +++L E +L
Sbjct: 2097 GDASGISGKFRINPSTGALSASQSLASESGKL 2128
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPED--I 144
+ + V D ND P F+ Y SV E G V ++ A+DAD G NA + YS+ +
Sbjct: 1937 ITVFVEDQNDNAPRFELSKYTASVQEDAPPGTRVAQITASDADLGVNARLVYSLANESQW 1996
Query: 145 PFVVDANTGDIRTNKALDYEKQQLY 169
F +D+++G I T LD E Q Y
Sbjct: 1997 QFAIDSSSGLITTIGKLDRELQASY 2021
Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 71/178 (39%), Gaps = 39/178 (21%)
Query: 23 ARDKHELGVTLMQVKATDKDSGKFGLVEYRLL-------DNNTDAASYFNLDPAT---EH 72
A++ +G + ATD D+G G ++YRLL ++ A S F++DP T
Sbjct: 1490 AKETTPVGSIIHNFTATDADTGTNGELQYRLLRYFPNVNESQEAATSLFSMDPLTGSLSL 1549
Query: 73 QGPIQDEG-------------------GLSSTATVNIRVTDINDKNPEFQSLPYE----- 108
P+ E L ++ TV +R+ D+ND P F S
Sbjct: 1550 LAPLDFEAVPEYLLIVQALDQSSNVTERLQTSVTVRLRIVDVNDNAPHFVSPKAANGKGA 1609
Query: 109 --FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKAL 161
F + G V + A D D G+N + Y + + F ++ TG I K+L
Sbjct: 1610 SIFINDATRIGEVVAHIVAVDEDTGENGRITYEISGGNGEGRFRINPQTGVIELAKSL 1667
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 74/172 (43%), Gaps = 40/172 (23%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------------ 77
G + QV+A D D+G + Y ++D N D A F ++PA G ++
Sbjct: 2344 GTFVAQVQAFDADAGANARLRYHIVDGNHDNA--FIIEPA--FSGIVKTNIVLDREIRDI 2399
Query: 78 --------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEF-SVPEGQD-GLAVGRVHA 125
DEG ++ TAT+ +++ D+ND P F P SV E + G + + A
Sbjct: 2400 YNLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTFP--PNNLVSVSEATELGAVITSISA 2457
Query: 126 TDADEGQNAVVYYSVPE--------DIPFVVDANTGDIRTNKALDYEKQQLY 169
D D A+ Y + DI F +D +G + + LDYE Q Y
Sbjct: 2458 NDVDT-YPALTYRLAADSAVEAENLDI-FALDRYSGKLILKRHLDYEMNQEY 2507
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 37/183 (20%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT---------EHQ 73
R++ G +++++A D+D+G+ + Y ++ ++D F++DP T +H+
Sbjct: 1263 REEQPPGTEVVRIRAIDRDNGQNASITYSIVKGRDSDGHGLFSIDPKTGMIRTRVVLDHE 1322
Query: 74 -------GPIQDEGGLSSTATVNI---RVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGR 122
G +GG TV I V D+ND P F S F V E G VG
Sbjct: 1323 ERSIYRLGVAATDGGSPPRETVRILRVEVLDLNDNRPTFTSSSLVFRVREDAVVGHVVGS 1382
Query: 123 VHATD--ADEGQNAVVYYS-----------VPEDI---PFVVDANTGDIRTNKALDYEKQ 166
+ ++ + QN++ +S + +D+ F +D ++G++ +K LD E Q
Sbjct: 1383 ISPSERPVESVQNSLEPFSEQLRITYTLTPLTKDLIEGAFDIDRHSGNLVVSKLLDREVQ 1442
Query: 167 QLY 169
+
Sbjct: 1443 SEF 1445
Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 28/163 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPI--- 76
G TL++V+A D+D G G V Y L + + + F ++P+T G +
Sbjct: 2072 GQTLLKVQAHDEDLGANGEVTYSLKGDASGISGKFRINPSTGALSASQSLASESGKLLQL 2131
Query: 77 ----QDEGG--LSSTATVNIRVTDINDKNP--EFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
+D+G +SS V + V + P FQ+ Y V E G + +V A
Sbjct: 2132 EVIARDKGTPPMSSVGLVELLVGEATPGAPVLHFQNETYRVRVAENSASGTKLLQVVALR 2191
Query: 128 ADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKA--LDYEK 165
+D G+ V +S ED F +DA++G++R NK LD+++
Sbjct: 2192 SD-GRRQKVQFSFGAGNEDGVFSLDASSGEVRVNKPHLLDFDR 2233
>gi|91090474|ref|XP_968232.1| PREDICTED: similar to cadherin [Tribolium castaneum]
Length = 3246
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 86/187 (45%), Gaps = 31/187 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-- 76
Y A + +G T++ V ATD D G + Y L ++ D + F ++P T G I
Sbjct: 845 YTASVFEDAAVGTTVLVVSATDNDVGLNAQITYSLGEDG-DHPAEFTINPQT---GAIIT 900
Query: 77 -----------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
+GG LS T V I +TD+ND P F+ Y SV E
Sbjct: 901 TRTLDRETTSGYLLTVTARDGGNPPLSDTTDVEISLTDVNDNYPVFKQAAYSGSVLEDAL 960
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLYLE 171
G +V +V ATDAD G N + YS+ E D FV+D +G IRTNK LD E +Y
Sbjct: 961 VGTSVVQVSATDADVGLNGKISYSLSEKDKEDGSFVIDPTSGVIRTNKGLDRESVAVYEL 1020
Query: 172 RVFLISK 178
+ I +
Sbjct: 1021 EAYAIDR 1027
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 78/171 (45%), Gaps = 31/171 (18%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI---------------- 76
+ +KATD D G + Y ++ NT S F +D T +
Sbjct: 540 IAHIKATDADQGNNAAIRYAIISGNTQ--SQFAIDSLTGDVSLVKPLDYETLRSYRLVIR 597
Query: 77 -QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
QD G S+T + I V D+ND P F + ++ S+ E G ++ +V A DADEG
Sbjct: 598 AQDGGSPARSNTTQLLINVKDVNDNAPRFYTSLFQESIQENAPAGYSIVKVQAYDADEGP 657
Query: 133 NAVVYYSVP---------EDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
NA + Y++ ED P VD++TG I T K LD E Q ++ +V
Sbjct: 658 NADIKYTIAPRDSIGASTEDFPLTVDSHTGWITTTKELDREDQSKFMFQVI 708
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 82/188 (43%), Gaps = 39/188 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY-------FNLDP--- 68
Y A ++ +G T++ +KATD+D GK VEY + N S F +DP
Sbjct: 407 YDASIKESVSVGSTVITLKATDQDVGKNADVEYSIQSINGGGISSEEEDNKAFKIDPKTG 466
Query: 69 ---------------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPY 107
AT+ P SS+A+V I + D ND P+F Y
Sbjct: 467 VITTRLMLDRETTEVYTLIVAATDLASP--QTARKSSSASVVIHILDDNDNYPQFSERTY 524
Query: 108 EFSVPEGQDGLA---VGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKAL 161
++ E D + + + ATDAD+G NA + Y++ F +D+ TGD+ K L
Sbjct: 525 TVALDEDIDWTSNPVIAHIKATDADQGNNAAIRYAIISGNTQSQFAIDSLTGDVSLVKPL 584
Query: 162 DYEKQQLY 169
DYE + Y
Sbjct: 585 DYETLRSY 592
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 73/166 (43%), Gaps = 28/166 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------E 71
+G +++QV ATD D G G + Y L + + + S F +DP + E
Sbjct: 961 VGTSVVQVSATDADVGLNGKISYSLSEKDKEDGS-FVIDPTSGVIRTNKGLDRESVAVYE 1019
Query: 72 HQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+ D G LSS+ V I + DIND P F S + E G VG +HA D
Sbjct: 1020 LEAYAIDRGSPTLSSSVPVTIHIDDINDSPPAFDSDKIVLYIAENSPIGSTVGEIHAKDP 1079
Query: 129 DEGQNAVVYYSV-----PEDIPFVV--DANTGDIRTNKALDYEKQQ 167
DEG NA+V YS+ + V + D+ T LDYE +
Sbjct: 1080 DEGVNAIVQYSIIGGEDSQSFSLVTRPGSEKADLLTMTELDYESAK 1125
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG + TATV + +TD N+ P F++ PY SV E G V V ATD D G NA +
Sbjct: 816 DSGGRTDTATVYVNITDANNFAPVFENAPYTASVFEDAAVGTTVLVVSATDNDVGLNAQI 875
Query: 137 YYSVPED----IPFVVDANTGDIRTNKALDYEKQQLYLERV 173
YS+ ED F ++ TG I T + LD E YL V
Sbjct: 876 TYSLGEDGDHPAEFTINPQTGAIITTRTLDRETTSGYLLTV 916
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 74/187 (39%), Gaps = 40/187 (21%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
Y A ++ + GV + VKA D ++ LLD+ T F +DP T G I
Sbjct: 301 LYVASVLEECDPGVVVTSVKARDPENSPISYSMSSLLDSRTQGM--FEIDPKT---GTIT 355
Query: 78 DEGGL----------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
+ L S T + I V D ND P F+ Y+ S+ E
Sbjct: 356 TKVKLDREMVDVHYFRVTAMDDSFPPRSGTTMLQINVLDANDHAPTFEMNEYDASIKESV 415
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSV------------PEDIPFVVDANTGDIRTNKALD 162
G V + ATD D G+NA V YS+ ++ F +D TG I T LD
Sbjct: 416 SVGSTVITLKATDQDVGKNADVEYSIQSINGGGISSEEEDNKAFKIDPKTGVITTRLMLD 475
Query: 163 YEKQQLY 169
E ++Y
Sbjct: 476 RETTEVY 482
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 33/174 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT--EHQGPIQ---------- 77
G ++++V+A D D G ++Y + ++ AS + P T H G I
Sbjct: 642 GYSIVKVQAYDADEGPNADIKYTIAPRDSIGASTEDF-PLTVDSHTGWITTTKELDREDQ 700
Query: 78 ----------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVH 124
D+G S++A+V I V D+ND +P F+ YE V E G V V
Sbjct: 701 SKFMFQVIATDQGTPPQSASASVIITVQDVNDNDPVFEPKIYESVVSEDDPPGTPVATVT 760
Query: 125 ATDADEGQNAVVYYSVPEDIP---FVVDANTGD--IRTNKALDYEKQQLYLERV 173
ATDADE + ++Y + F + + G I + LDY++++ Y+ V
Sbjct: 761 ATDADE--DTRLHYELTNGNTRGRFAITSQNGRGVITVAQPLDYKQEKRYILTV 812
>gi|335294261|ref|XP_003357178.1| PREDICTED: protocadherin-16 [Sus scrofa]
Length = 3300
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 84/162 (51%), Gaps = 28/162 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGP- 75
G +++V A D D G G V Y L A +F++DP++ E Q
Sbjct: 487 GSFVVRVTAQDPDQGTNGQVTYSLAPGAH--AHWFSIDPSSGIITTAASLDYELEPQPQL 544
Query: 76 --IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ +GGL +S+ATV++ + D+ND P+FQ Y S+PEG Q G +V ATDAD
Sbjct: 545 IVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDAD 604
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEK 165
G ++ YS+ + PF +DA++GD+ T + LD ++
Sbjct: 605 SGPFGLLSYSLGAGLGASGSPPFRIDAHSGDVCTTRTLDRDQ 646
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 81/178 (45%), Gaps = 30/178 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + R+ GV+L+ ++ATD D G G V Y + + F+LDP T
Sbjct: 1652 YSVLLRENSPPGVSLLTLRATDPDLGANGHVTYGGVSGES-----FSLDPDTGVLTTLRA 1706
Query: 71 ---EHQGPIQ-----DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
E Q I +GG L + TV + V D ND P F S VPEGQD
Sbjct: 1707 LDREEQEKINLTVYARDGGSPPLLAHVTVRVAVDDENDHAPAFGSAHLSLEVPEGQDPQT 1766
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQ---QLYLE 171
+ + A+D D G N + Y + + P FV+D +G+ T + LD E + QL +E
Sbjct: 1767 LATLRASDPDAGANGQLQYRILDGDPAGAFVLDLASGEFGTMRPLDREVEPAFQLKIE 1824
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 74/162 (45%), Gaps = 28/162 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA---------------TEHQ 73
+G L+QV+A+D D G GL+ + L ++ D F LD + T HQ
Sbjct: 2615 VGAELLQVEASDADPGPHGLIRFTL--SSGDPLGLFELDESSGDLRLARPLDCETQTRHQ 2672
Query: 74 GPIQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
+Q G + A V I V D+ND P F S+ E Q G V +HA D D
Sbjct: 2673 LVVQAADPAGAHFALAPVTIEVQDVNDHGPAFPLSLLSTSLAENQPPGTLVTTLHAVDGD 2732
Query: 130 EGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYE 164
G ++YS+ E P F ++++TG++R A DYE
Sbjct: 2733 AGAFGRLHYSLLEAGPGPEGREAFALNSSTGELRARVAFDYE 2774
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 76/160 (47%), Gaps = 24/160 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG---PIQDE--------- 79
TL ++A+D D+G G ++YR+LD D A F LD A+ G P+ E
Sbjct: 1766 TLATLRASDPDAGANGQLQYRILDG--DPAGAFVLDLASGEFGTMRPLDREVEPAFQLKI 1823
Query: 80 ----GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEG 131
GG LS+T V + V D ND P F Y VPE G + ++ A D D G
Sbjct: 1824 EARDGGQPALSATLLVTVTVLDANDHAPTFPEPAYSVEVPEDAPAGTLLLQLQAHDPDAG 1883
Query: 132 QNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
N V Y + F+++ ++G++RT ALD E+ Y
Sbjct: 1884 ANGHVTYYLGAGAAGAFLLEPSSGELRTATALDREQCPSY 1923
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 22/161 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT--DAASYFNLDPAT--- 70
SL ++A ++ G + + A D D+G FG + Y LL+ + F L+ +T
Sbjct: 2707 SLLSTSLAENQPP-GTLVTTLHAVDGDAGAFGRLHYSLLEAGPGPEGREAFALNSSTGEL 2765
Query: 71 --------EHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
EH G Q D G LS++ TV++ VT ++ +P F + + F VPEG +
Sbjct: 2766 RARVAFDYEHTGSFQLLVGATDAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQVPEGAR 2825
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDI 155
G ++G V ATD D G + +V Y + P F ++ TG +
Sbjct: 2826 RGHSLGHVQATDEDGGADGLVLYFLATPSPYFGINQTTGAL 2866
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 63/146 (43%), Gaps = 26/146 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY--------------RLLDNNTDAASY 63
FY A + + G +QV ATD DSG FGL+ Y R+ ++ D +
Sbjct: 580 FYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGASGSPPFRIDAHSGDVCTT 639
Query: 64 FNLDPATEHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEG 114
LD QGP D GGL S V + V+D ND P F Y S+ +
Sbjct: 640 RTLD---RDQGPSSFDFTVTAVDGGGLKSMVYVKVFVSDENDNPPRFYPREYAASLSAQS 696
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV 140
G AV RV A D D+G + + Y +
Sbjct: 697 TPGTAVLRVRAHDPDQGPHGRLSYHI 722
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A +++ + DIND P F Y +V E G V +V+A+DAD G N V Y +
Sbjct: 237 ALLDVTLLDINDHAPAFNQSRYHGTVSESLAPGSPVLQVYASDADAGANGAVTYEINRRQ 296
Query: 143 ---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D PF +DA+TG +R + LD+E+++++
Sbjct: 297 SEGDGPFSIDAHTGLLRLERPLDFEQRRVH 326
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 74/167 (44%), Gaps = 32/167 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQ----- 73
G ++QV+A D G V Y L + +S F L+P + E Q
Sbjct: 1014 GTRVLQVQARAPDGGP---VTYHLAADGP--SSPFGLEPQSGWLWVRAALDREAQELYTL 1068
Query: 74 ------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
G + G ++TATV + + ND +P P +V E Q G +VGRV AT
Sbjct: 1069 RVMAVSGSKAELGQQTATATVRVSILSQNDHSPRLSEEPTFLAVAENQLPGTSVGRVFAT 1128
Query: 127 DADEGQNAVVYYS---VPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
D D G N + YS + ED F + TG++ T + LD E+Q Y
Sbjct: 1129 DRDSGPNGRLTYSLRQLSEDSKVFRIHPQTGEVTTLQTLDRERQSSY 1175
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 72/173 (41%), Gaps = 31/173 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGPI---------- 76
G + ++A D DSG G V + LL A F +DP T H GP+
Sbjct: 908 GTPIYTLRALDPDSGANGRVTFTLLAGGGGA---FTVDPTTGHIRLMGPLGPLGGPAHEL 964
Query: 77 ----QDEGGLSSTATVNIRVT--DINDKN--PEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D G T+ +RV D+ + P F S Y +P G G V +V A
Sbjct: 965 ELEARDGGSPPRTSHFRLRVVVQDLGSRGLAPHFDSPTYRVDLPSGTSPGTRVLQVQARA 1024
Query: 128 ADEGQNAVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D G V Y + D PF ++ +G + ALD E Q+LY RV +S
Sbjct: 1025 PDGGP---VTYHLAADGPSSPFGLEPQSGWLWVRAALDREAQELYTLRVMAVS 1074
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 46/178 (25%)
Query: 30 GVTLMQVKATDKDSGK-FGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------ 82
G TL+ ++ATD D + V+Y ++ N F+L+P G + GGL
Sbjct: 2496 GSTLLTLEATDADGSRSHATVDYSIVSGNR--GRVFHLEPRLAEAG---ESGGLGPRALG 2550
Query: 83 ------------------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
SS V + V D+ND P F Y +VP
Sbjct: 2551 CLVLLEPLDFESLTQYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASYRVAVP 2610
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQ 166
E G + +V A+DAD G + ++ +++ P F +D ++GD+R + LD E Q
Sbjct: 2611 EDTPVGAELLQVEASDADPGPHGLIRFTLSSGDPLGLFELDESSGDLRLARPLDCETQ 2668
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 70/160 (43%), Gaps = 27/160 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDA------------ASYFNLDP 68
G + V A D D G+ V YRL L +T A A Y
Sbjct: 1559 GPAALHVVARDPDLGEAARVSYRLAAGGDGCFRLHPSTGALSVVRPLDREQRAEYLLTVV 1618
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
A++H P + S+T + I V D+ND+ P FQ Y + E G+++ + ATD
Sbjct: 1619 ASDHGSPPR-----SATQLLTISVADVNDEAPTFQQQEYSVLLRENSPPGVSLLTLRATD 1673
Query: 128 ADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQ 167
D G N V Y F +D +TG + T +ALD E+Q+
Sbjct: 1674 PDLGANGHVTYGGVSGESFSLDPDTGVLTTLRALDREEQE 1713
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG---- 74
Y A + G +++V+A D D G G + Y +L N+ F LD EH G
Sbjct: 688 YAASLSAQSTPGTAVLRVRAHDPDQGPHGRLSYHILAGNS--PPLFALD---EHSGLLTV 742
Query: 75 --PI--------------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ QD GGL + A VN+ + P F+ L Y FSVPE
Sbjct: 743 AWPLARRANSVVQLEIGAQDGGGLQAEPRARVNVSIVPGTPSPPVFEQLQYVFSVPEDVA 802
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
G +VG V A + G+ V ++ P F +D TG + T + LD E LE
Sbjct: 803 PGTSVGVVQAHNP-PGRLGPVTLALSGGDPRGLFSLDGATGLLETLRPLDRELLGPVLE 860
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 33/171 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G ++ +V ATD+DSG G + Y L + D+ F + P T E Q
Sbjct: 1119 GTSVGRVFATDRDSGPNGRLTYSLRQLSEDS-KVFRIHPQTGEVTTLQTLDRERQSSYQL 1177
Query: 76 ---IQDEGG--LSSTATVNIRVTDINDKNPEF--------QSLPYEFSVPEG-QDGLAVG 121
+QD G S+T TV+I V D+ND +P F LP + VP+G G V
Sbjct: 1178 LVQVQDGGSPPRSTTGTVHITVLDLNDNSPTFLQASGAAGGGLPVQ--VPDGVPPGTLVT 1235
Query: 122 RVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ A D D G+N + Y++ P F + ++G++ T L ++ Y+
Sbjct: 1236 TLQAKDPDAGENGTILYTLTGPGSELFSLHPHSGELLTAAPLIRAERPHYV 1286
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 66/147 (44%), Gaps = 28/147 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------- 68
Y AM + G ++ V ATD+DSG G + Y L A F++DP
Sbjct: 2378 LYQAMLLEHAPPGSAILSVSATDRDSGANGHISYHL----ASPAEGFSVDPNNGTLFTAA 2433
Query: 69 ---ATEHQGP--------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG- 114
A H+GP +D G G + ATV++++ D ND P F Y +V E
Sbjct: 2434 GTAAWGHEGPGVVDVVLEARDHGTPGRVARATVHVQLQDQNDHAPSFTLPHYRVAVSEDL 2493
Query: 115 QDGLAVGRVHATDADEGQ-NAVVYYSV 140
G + + ATDAD + +A V YS+
Sbjct: 2494 PPGSTLLTLEATDADGSRSHATVDYSI 2520
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 30/158 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGP---- 75
G L+Q++A D D+G G V Y L AA F L+P++ Q P
Sbjct: 1869 GTLLLQLQAHDPDAGANGHVTYYL---GAGAAGAFLLEPSSGELRTATALDREQCPSYAF 1925
Query: 76 ------IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-----VGRVH 124
G LS+T V + V D+ND P F + P +P L+ + +
Sbjct: 1926 TVNAVDAAAAGPLSTTVPVTVTVRDVNDHAPTFPTSPLRLRLPRPGPSLSTPTLPLATLR 1985
Query: 125 ATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKA 160
A D D G NA + Y + P VD+ TG+IR ++
Sbjct: 1986 AEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARS 2023
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 68/178 (38%), Gaps = 35/178 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + L L+QV+A D D G G V Y L + A F++DP
Sbjct: 2174 YVAFLPESRPLEGPLLQVEADDPDQGPSGQVSYSLAASQP-ARGLFHVDPATGTITTTAI 2232
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
AT+ P L +AT+ + V D ND P P+E V E
Sbjct: 2233 LDREIWAETRLVLMATDKGSP-----ALVGSATLTVLVVDTNDNRPTIPQ-PWELRVSED 2286
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + +V D D G A+ Y P + PF V G + LDYE++ Y
Sbjct: 2287 ALLGSEIAQVTGNDVDSGP-ALWYVLSPSGQRGPFSVGRYGGRLSLTGPLDYEQRDRY 2343
Score = 42.4 bits (98), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 82 LSSTATVNIRVTDINDKNPEF-------QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
L + A + VTD+ND P F + LP E ++P G V RV A D D+G N
Sbjct: 450 LRAEAAFVLHVTDVNDNAPTFDRQLYRPEPLP-EVALP----GSFVVRVTAQDPDQGTNG 504
Query: 135 VVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
V YS+ F +D ++G I T +LDYE
Sbjct: 505 QVTYSLAPGAHAHWFSIDPSSGIITTAASLDYE 537
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD-EGQNAVVYYSV----P 141
V +RV D N+ P F P ++PE + G A+ A+DAD G N+ V Y + P
Sbjct: 1420 VQVRVQDENEHTPAFARDPLALALPENPEPGAALYTFRASDADGPGPNSDVRYRLLRQEP 1479
Query: 142 EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+DA TG + + LD E L
Sbjct: 1480 PAPALRLDARTGALSAPRGLDREATPALL 1508
Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 63/163 (38%), Gaps = 15/163 (9%)
Query: 4 CPIPSALEMTSDSLFYGAMAR---DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA 60
P P L ++ D+L +A+ + + G L V + G F + Y + T
Sbjct: 2275 IPQPWELRVSEDALLGSEIAQVTGNDVDSGPALWYVLSPSGQRGPFSVGRYGGRLSLTGP 2334
Query: 61 ASYFNLD----PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQ 115
Y D H GP Q A + + V D+ND P F QSL +
Sbjct: 2335 LDYEQRDRYHLQLLAHDGPHQGH------ANLTVLVEDVNDNAPTFSQSLYQAMLLEHAP 2388
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRT 157
G A+ V ATD D G N + Y + F VD N G + T
Sbjct: 2389 PGSAILSVSATDRDSGANGHISYHLASPAEGFSVDPNNGTLFT 2431
>gi|270014310|gb|EFA10758.1| starry night [Tribolium castaneum]
Length = 3257
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 86/187 (45%), Gaps = 31/187 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-- 76
Y A + +G T++ V ATD D G + Y L ++ D + F ++P T G I
Sbjct: 845 YTASVFEDAAVGTTVLVVSATDNDVGLNAQITYSLGEDG-DHPAEFTINPQT---GAIIT 900
Query: 77 -----------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
+GG LS T V I +TD+ND P F+ Y SV E
Sbjct: 901 TRTLDRETTSGYLLTVTARDGGNPPLSDTTDVEISLTDVNDNYPVFKQAAYSGSVLEDAL 960
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLYLE 171
G +V +V ATDAD G N + YS+ E D FV+D +G IRTNK LD E +Y
Sbjct: 961 VGTSVVQVSATDADVGLNGKISYSLSEKDKEDGSFVIDPTSGVIRTNKGLDRESVAVYEL 1020
Query: 172 RVFLISK 178
+ I +
Sbjct: 1021 EAYAIDR 1027
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 78/171 (45%), Gaps = 31/171 (18%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI---------------- 76
+ +KATD D G + Y ++ NT S F +D T +
Sbjct: 540 IAHIKATDADQGNNAAIRYAIISGNTQ--SQFAIDSLTGDVSLVKPLDYETLRSYRLVIR 597
Query: 77 -QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
QD G S+T + I V D+ND P F + ++ S+ E G ++ +V A DADEG
Sbjct: 598 AQDGGSPARSNTTQLLINVKDVNDNAPRFYTSLFQESIQENAPAGYSIVKVQAYDADEGP 657
Query: 133 NAVVYYSVP---------EDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
NA + Y++ ED P VD++TG I T K LD E Q ++ +V
Sbjct: 658 NADIKYTIAPRDSIGASTEDFPLTVDSHTGWITTTKELDREDQSKFMFQVI 708
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 82/188 (43%), Gaps = 39/188 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY-------FNLDP--- 68
Y A ++ +G T++ +KATD+D GK VEY + N S F +DP
Sbjct: 407 YDASIKESVSVGSTVITLKATDQDVGKNADVEYSIQSINGGGISSEEEDNKAFKIDPKTG 466
Query: 69 ---------------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPY 107
AT+ P SS+A+V I + D ND P+F Y
Sbjct: 467 VITTRLMLDRETTEVYTLIVAATDLASP--QTARKSSSASVVIHILDDNDNYPQFSERTY 524
Query: 108 EFSVPEGQDGLA---VGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKAL 161
++ E D + + + ATDAD+G NA + Y++ F +D+ TGD+ K L
Sbjct: 525 TVALDEDIDWTSNPVIAHIKATDADQGNNAAIRYAIISGNTQSQFAIDSLTGDVSLVKPL 584
Query: 162 DYEKQQLY 169
DYE + Y
Sbjct: 585 DYETLRSY 592
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 73/166 (43%), Gaps = 28/166 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------E 71
+G +++QV ATD D G G + Y L + + + S F +DP + E
Sbjct: 961 VGTSVVQVSATDADVGLNGKISYSLSEKDKEDGS-FVIDPTSGVIRTNKGLDRESVAVYE 1019
Query: 72 HQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+ D G LSS+ V I + DIND P F S + E G VG +HA D
Sbjct: 1020 LEAYAIDRGSPTLSSSVPVTIHIDDINDSPPAFDSDKIVLYIAENSPIGSTVGEIHAKDP 1079
Query: 129 DEGQNAVVYYSV-----PEDIPFVV--DANTGDIRTNKALDYEKQQ 167
DEG NA+V YS+ + V + D+ T LDYE +
Sbjct: 1080 DEGVNAIVQYSIIGGEDSQSFSLVTRPGSEKADLLTMTELDYESAK 1125
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG + TATV + +TD N+ P F++ PY SV E G V V ATD D G NA +
Sbjct: 816 DSGGRTDTATVYVNITDANNFAPVFENAPYTASVFEDAAVGTTVLVVSATDNDVGLNAQI 875
Query: 137 YYSVPED----IPFVVDANTGDIRTNKALDYEKQQLYLERV 173
YS+ ED F ++ TG I T + LD E YL V
Sbjct: 876 TYSLGEDGDHPAEFTINPQTGAIITTRTLDRETTSGYLLTV 916
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 74/187 (39%), Gaps = 40/187 (21%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
Y A ++ + GV + VKA D ++ LLD+ T F +DP T G I
Sbjct: 301 LYVASVLEECDPGVVVTSVKARDPENSPISYSMSSLLDSRTQGM--FEIDPKT---GTIT 355
Query: 78 DEGGL----------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
+ L S T + I V D ND P F+ Y+ S+ E
Sbjct: 356 TKVKLDREMVDVHYFRVTAMDDSFPPRSGTTMLQINVLDANDHAPTFEMNEYDASIKESV 415
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSV------------PEDIPFVVDANTGDIRTNKALD 162
G V + ATD D G+NA V YS+ ++ F +D TG I T LD
Sbjct: 416 SVGSTVITLKATDQDVGKNADVEYSIQSINGGGISSEEEDNKAFKIDPKTGVITTRLMLD 475
Query: 163 YEKQQLY 169
E ++Y
Sbjct: 476 RETTEVY 482
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 33/174 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT--EHQGPIQ---------- 77
G ++++V+A D D G ++Y + ++ AS + P T H G I
Sbjct: 642 GYSIVKVQAYDADEGPNADIKYTIAPRDSIGASTEDF-PLTVDSHTGWITTTKELDREDQ 700
Query: 78 ----------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVH 124
D+G S++A+V I V D+ND +P F+ YE V E G V V
Sbjct: 701 SKFMFQVIATDQGTPPQSASASVIITVQDVNDNDPVFEPKIYESVVSEDDPPGTPVATVT 760
Query: 125 ATDADEGQNAVVYYSVPEDIP---FVVDANTGD--IRTNKALDYEKQQLYLERV 173
ATDADE + ++Y + F + + G I + LDY++++ Y+ V
Sbjct: 761 ATDADE--DTRLHYELTNGNTRGRFAITSQNGRGVITVAQPLDYKQEKRYILTV 812
>gi|241148648|ref|XP_002405854.1| protocadherin-16, putative [Ixodes scapularis]
gi|215493769|gb|EEC03410.1| protocadherin-16, putative [Ixodes scapularis]
Length = 3222
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 24/157 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGPIQDE------ 79
LG ++QV ++D+D+ + Y +N F +DP T + GP+ E
Sbjct: 1084 LGAFVIQVTSSDRDAAENANATYSFTEN---PGERFAIDPLTGNVTVAGPLDRELRDEYL 1140
Query: 80 -------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADE- 130
G + + + + D+ND P F+ + Y F +PE Q G + VGRV ATDAD+
Sbjct: 1141 LKVAAVDGSWKAETPLTVSLQDVNDNAPRFERMAYRFRLPELQSGGSFVGRVAATDADKT 1200
Query: 131 GQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEK 165
G NA V YS+ P D+ F VD TG++ + + L Y +
Sbjct: 1201 GPNAAVSYSLRRPSDL-FRVDPATGEVLSKQPLRYRR 1236
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 75/161 (46%), Gaps = 28/161 (17%)
Query: 33 LMQVKATDKDSGKFGLVEY-------------------RLLDNNTDAASYFNLDPATEHQ 73
+M VKA D+D G+ VEY R L + ASY L A +
Sbjct: 347 VMAVKAVDRDEGRNSYVEYSVSPEHTFSLGPVDGLLRVRGLLDREQRASYELLVTARDRG 406
Query: 74 GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
P++ ++ + +R+ D ND +P F Y +V E G +V RV ATD DEG
Sbjct: 407 HPVR-----VASQRLRVRLLDENDNSPVFDPRQYSAAVSENSSVGASVLRVSATDQDEGA 461
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYL 170
+ V YS+ P F V +TG +R ++LDYE++ YL
Sbjct: 462 SGQVRYSIIAGDPNHDFSVGQDTGVLRVRRSLDYERRTRYL 502
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVV 136
DE LSS +++++TD+ND PEF+ Y SV E Q G V ++HA D D G N +
Sbjct: 936 DEPALSSAVRIDVQLTDVNDNVPEFERDVYNTSVREEQSAGQLVAQLHARDGDSGVNGKL 995
Query: 137 YYSVP--------EDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y + +D+PF +DA TG++RT LD E Y
Sbjct: 996 RYELRPLPTSRDFDDLPFEIDAATGELRTTARLDRETVAHY 1036
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 29/165 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL---------- 82
L+ V ATD DSG G V Y + NT F ++P H G + L
Sbjct: 1407 LLTVSATDADSGLNGEVRYSIESGNT--GDSFAMEP---HNGALTISAVLDYETVPEFRL 1461
Query: 83 ------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
++AT+ + VTD+ND P+F + ++ V E + G V ++ A+DAD
Sbjct: 1462 NVSACDAAFHRKCASATLTVIVTDVNDCPPQFNATHFDAYVAENEPPGTTVTQLSASDAD 1521
Query: 130 EGQNAVVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
G+N +V Y+ V F VD +G + + DYE+ Y+ V
Sbjct: 1522 SGRNRIVQYALVGGSSDFAVDPQSGVVTAQSSFDYEQTSEYVLEV 1566
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 73/162 (45%), Gaps = 23/162 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQ 73
+G T+ ++A D D G V + + + +DA +F +DP T +H
Sbjct: 31 VGSTVAVLQADDPD--LEGSVRFSIAEGQSDAG-HFRIDPQTGALLLVEALDRELQAQHL 87
Query: 74 GPIQDEGGLSST-ATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEG 131
+ GL ST A V+I VTD ND P F Y F + E Q G VG V A DAD G
Sbjct: 88 FSVTATDGLQSTEALVSIEVTDTNDNLPLFGEAAYSFDLWEDTQRGAQVGAVSAVDADLG 147
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYL 170
N V YSV D F ++ TG LDYE Q Y+
Sbjct: 148 LNRQVSYSVLSDWANDVFSLNPQTGVFTLTSHLDYELYQHYV 189
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 25/182 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL--DNNTD-----------AASYFN 65
Y A + +G ++++V ATD+D G G V Y ++ D N D +
Sbjct: 435 YSAAVSENSSVGASVLRVSATDQDEGASGQVRYSIIAGDPNHDFSVGQDTGVLRVRRSLD 494
Query: 66 LDPATEHQGPIQDE--GGLSS-----TATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDG 117
+ T + +Q E G SS TATV I VTD+ND P F PYE V E
Sbjct: 495 YERRTRYLLTLQAEDCAGASSELRFDTATVTISVTDVNDNAPAFLDSPYELHVVENAATP 554
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLYLERVF 174
+ + + A DAD+ + ++Y + ED+ F ++ +G++ + LD E + YL V
Sbjct: 555 VVLLTLAAHDADQLPSGPIHYRL-EDLGHGAFRINGTSGELSLERPLDRELRDRYLLTVL 613
Query: 175 LI 176
+
Sbjct: 614 AV 615
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 76/155 (49%), Gaps = 18/155 (11%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTD-----------AASYFNLDPATEHQGPI-- 76
G T+ Q+ A+D DSG+ +V+Y L+ ++D A S F+ + +E+ +
Sbjct: 1509 GTTVTQLSASDADSGRNRIVQYALVGGSSDFAVDPQSGVVTAQSSFDYEQTSEYVLEVVA 1568
Query: 77 QDEGGLS-STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNA 134
+ G L S+ + + VT N+ P F ++F+V E G AVGRV ATD D G
Sbjct: 1569 SNPGSLQYSSCQLRVHVTGKNEFFPRFVQPVFQFAVSESTVVGTAVGRVLATDEDSGPEG 1628
Query: 135 VVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQ 166
VY+ D F + +TG I ++ LD E Q
Sbjct: 1629 DVYFLFVGSSNDRGFRIQPSTGVITVSRTLDREAQ 1663
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 75/165 (45%), Gaps = 26/165 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT--------------EHQ 73
+ G + V A D D G V Y +L + A F+L+P T +H
Sbjct: 131 QRGAQVGAVSAVDADLGLNRQVSYSVLSDW--ANDVFSLNPQTGVFTLTSHLDYELYQHY 188
Query: 74 GPI---QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+ QD G LSSTATV + V D+ND P F + Y V E G ++ RV ATD
Sbjct: 189 VLVVQAQDSGTPSLSSTATVYVNVLDLNDNAPLFDPMSYSDEVLENVTVGSSLLRVSATD 248
Query: 128 ADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
D G N + YS+ E P + AN G I T LD E++ LY
Sbjct: 249 LDSGDNGRIVYSIAEGDPGGQLAILAN-GTIVTRLPLDRERKSLY 292
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG-LAVGRVHATDADEGQNAVVYYSV- 140
+ T TV++ V+D+ND PEF Y S+ E Q V R+ ATDAD G+NA + YS+
Sbjct: 623 TGTGTVSVFVSDVNDNAPEFDRSRYVASLAENQPADHPVTRITATDADVGRNARIRYSLH 682
Query: 141 -PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ F VDA +G +R +D E+ + Y R+
Sbjct: 683 GEQGSRFSVDAESGLVRARVPMDREECERYELRL 716
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 77/176 (43%), Gaps = 23/176 (13%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL-----------LDNNT----- 58
D + Y + +G +L++V ATD DSG G + Y + L N T
Sbjct: 223 DPMSYSDEVLENVTVGSSLLRVSATDLDSGDNGRIVYSIAEGDPGGQLAILANGTIVTRL 282
Query: 59 ----DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
+ S ++L Q P + LSS+ V I + D+ND PEF + P SV E
Sbjct: 283 PLDRERKSLYSLVVRATDQAP-EVHKRLSSSVQVTIVLKDVNDMVPEFVT-PNVTSVQEN 340
Query: 115 QDG-LAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V A D DEG+N+ V YSV + F + G +R LD E++ Y
Sbjct: 341 APANTIVMAVKAVDRDEGRNSYVEYSVSPEHTFSLGPVDGLLRVRGLLDREQRASY 396
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 79/183 (43%), Gaps = 26/183 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL--LDNNTDAASY-FNLDPATEHQGP 75
Y R++ G + Q+ A D DSG G + Y L L + D F +D AT
Sbjct: 965 YNTSVREEQSAGQLVAQLHARDGDSGVNGKLRYELRPLPTSRDFDDLPFEIDAATGELRT 1024
Query: 76 I-----------------QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+DEG L+ TATV + V+D ND P F L + +V E
Sbjct: 1025 TARLDRETVAHYRFLVEARDEGDPSLTGTATVLVSVSDKNDNPPRFTRL-FSVNVTENAP 1083
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERV 173
G V +V ++D D +NA YS E+ F +D TG++ LD E + YL +V
Sbjct: 1084 LGAFVIQVTSSDRDAAENANATYSFTENPGERFAIDPLTGNVTVAGPLDRELRDEYLLKV 1143
Query: 174 FLI 176
+
Sbjct: 1144 AAV 1146
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 26/147 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQDE---------- 79
+ ++ ATD D G+ + Y L + + S F++D + + P+ E
Sbjct: 661 VTRITATDADVGRNARIRYSL---HGEQGSRFSVDAESGLVRARVPMDREECERYELRLV 717
Query: 80 ---GGL----SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
GL S+T + + VTD ND P F S VP G + G V ATDAD G
Sbjct: 718 AHDDGLTVRHSATVELVVLVTDQNDNRPTFASANTSVVVPSGAEPGHFVLGARATDADSG 777
Query: 132 QNA--VVYYSVPEDIPFVVDANTGDIR 156
N V + S P+ F + +TG IR
Sbjct: 778 PNGQLVFHLSGPDVDKFQIQQDTGVIR 804
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 22/162 (13%)
Query: 25 DKHELGVTLMQVKATD-KDSGKFGLVEYRLLDNN-TD------AASYFNL-DPATEHQGP 75
D +G+++++V A D +D G + Y + D N TD + + + P QG
Sbjct: 1293 DNAAVGLSVVRVTARDDQDVGVNAELMYSIFDGNGTDLLDIHQTSGWLTVAKPLPRQQGQ 1352
Query: 76 I-------QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHA 125
+ D+G S+ V++ +T N +P F +L Y+ +PE + + + V A
Sbjct: 1353 MFALKVRATDQGVPPKSADTVVSVTITGENQFSPVFTALSYQIIIPENEPVHSELLTVSA 1412
Query: 126 TDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYE 164
TDAD G N V YS+ F ++ + G + + LDYE
Sbjct: 1413 TDADSGLNGEVRYSIESGNTGDSFAMEPHNGALTISAVLDYE 1454
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT- 126
AT+H P LSS TV + V D N+ P+F+ Y +P+ GL+V RV A
Sbjct: 1254 ATDHGKP-----PLSSETTVYVSVVDANNHVPKFEQTTYFSPLPDNAAVGLSVVRVTARD 1308
Query: 127 DADEGQNAVVYYSV 140
D D G NA + YS+
Sbjct: 1309 DQDVGVNAELMYSI 1322
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDAD-EGQNAVVYYSVPEDIP 145
V + V D ND P FQ+ PY S+ E G V + A D D EG V +S+ E
Sbjct: 2 VTVTVLDRNDSPPRFQNGPYTISLSEDAPVGSTVAVLQADDPDLEGS---VRFSIAEGQS 58
Query: 146 ----FVVDANTGDIRTNKALDYEKQQLYL 170
F +D TG + +ALD E Q +L
Sbjct: 59 DAGHFRIDPQTGALLLVEALDRELQAQHL 87
>gi|431913398|gb|ELK15073.1| Cadherin EGF LAG seven-pass G-type receptor 3 [Pteropus alecto]
Length = 2408
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 84/176 (47%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGP 75
Y A R+ +++V ATD+D GLV Y ++ N+ +F +D T + P
Sbjct: 300 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRG--HFAIDSLTGEIQVVAP 357
Query: 76 I--------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ QD G ++T +I+V DIND P F S P++ SV E G
Sbjct: 358 LDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLENAPLG 417
Query: 118 LAVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+V + A DAD G+NA + YS V D PFV+++ TG + + LD E + Y
Sbjct: 418 HSVIHIQAVDADHGENARLEYSLTGVASDTPFVINSATGWVSVSGPLDRESVEHYF 473
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQG 74
+++Q+ ATD+D+ G V+Y N D F ++P + E
Sbjct: 729 SVLQISATDRDAHANGRVQY-TFQNGEDGDGDFTIEPTSGIVRTVRRLDREAMPVYELTA 787
Query: 75 PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G L + ++ + V D+ND P F + +E V E G V ++ A D DEG
Sbjct: 788 YAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDEG 847
Query: 132 QNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE +Q Y+
Sbjct: 848 PNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYV 889
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 84/185 (45%), Gaps = 32/185 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY---FNLDPAT----- 70
Y R+ E G ++Q++ATD D+ + YR + + A+ F +DP +
Sbjct: 188 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPSAARAAAAAAFEIDPRSGLIST 247
Query: 71 ------EH------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH QG Q+ G S+T V+I V D ND P+F Y V
Sbjct: 248 SGRVDREHMESYELVVEASDQG--QEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVR 305
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E + V RV ATD D+ N +V+Y++ F +D+ TG+I+ LD+E ++
Sbjct: 306 EDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVVAPLDFEAERE 365
Query: 169 YLERV 173
Y R+
Sbjct: 366 YALRI 370
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V+I +TD N P FQS Y SV E + G V + A+D D G+NA + Y + +++P
Sbjct: 594 VHINITDANTHRPVFQSAHYSVSVNEDRPVGSTVVVISASDDDVGENARITYLLEDNLPQ 653
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DA++G I LDYE Q Y
Sbjct: 654 FRIDADSGAITLQATLDYEDQVTY 677
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 29/180 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT------- 70
Y A+ + G +++V A D D+G+ G + Y L N+ + F++D +
Sbjct: 80 YQALVPENEASGTVVLRVAAQDPDAGEAGRLVYSLAALMNSRSLELFSIDAQSGLIRTEA 139
Query: 71 --------EH--QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
H + QD G LS+T V + V D ND +P F+ Y ++ E ++G
Sbjct: 140 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVVDRNDHSPVFEQAQYRETLRENVEEG 199
Query: 118 LAVGRVHATDADEGQNAVVYY--------SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ ++ ATD D NA + Y F +D +G I T+ +D E + Y
Sbjct: 200 YPILQLRATDGDAPPNANLRYRFVGPSAARAAAAAAFEIDPRSGLISTSGRVDREHMESY 259
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDIP--- 145
+R +++P+F Y+ VPE + G V RV A D D G+ + YS+ +
Sbjct: 63 VRPRRAANRHPQFPQYNYQALVPENEASGTVVLRVAAQDPDAGEAGRLVYSLAALMNSRS 122
Query: 146 ---FVVDANTGDIRTNKALDYEKQQLYLERV 173
F +DA +G IRT ALD E + + RV
Sbjct: 123 LELFSIDAQSGLIRTEAALDRESMERHYLRV 153
Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 73/177 (41%), Gaps = 30/177 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGPI--------- 76
LG +++ ++A D D G+ +EY L +D F ++ AT GP+
Sbjct: 416 LGHSVIHIQAVDADHGENARLEYSLTGVASDTP--FVINSATGWVSVSGPLDRESVEHYF 473
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDA 128
+D G LS++A+V + V D+ND PEF Y + E G +V V A D
Sbjct: 474 FGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGTSVVSVTAVDR 533
Query: 129 DEGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
D N+ + Y + G + LDY KQ+ Y + V S A
Sbjct: 534 DA--NSAISYQITGGNTRNRFAISTQGGIGLVTLALPLDY-KQERYFKLVLTASDRA 587
Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 74/174 (42%), Gaps = 20/174 (11%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN----NTDAAS-YFNLDPAT 70
S Y + +G T++ + A+D D G+ + Y L DN DA S L
Sbjct: 610 SAHYSVSVNEDRPVGSTVVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQATL 669
Query: 71 EHQGPI--------QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-A 119
+++ + +D G + T V + V D+ND P+F + Y V E +
Sbjct: 670 DYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFTS 729
Query: 120 VGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
V ++ ATD D N V Y+ D F ++ +G +RT + LD E +Y
Sbjct: 730 VLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAMPVY 783
>gi|348570608|ref|XP_003471089.1| PREDICTED: protocadherin-11 X-linked-like [Cavia porcellus]
Length = 1102
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 81/175 (46%), Gaps = 26/175 (14%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------ 70
LF + + G L ++ ATD D+G+ + Y L DA S FNLDP T
Sbjct: 469 LFISLSVPENNSPGTQLTKISATDADNGQNAEISYLL---GVDAPSEFNLDPRTGVLTAV 525
Query: 71 -----EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--Q 115
E Q +D G L + ATV + V D ND +P F Y F VPE +
Sbjct: 526 NKLDREKQEKYYFTVLAKDNGIPSLMTNATVFVTVLDQNDNSPVFTHNEYNFYVPENLPR 585
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLY 169
G VG + TD D G+N+ V S+ + F +D TG IR N + D EKQ+ Y
Sbjct: 586 HG-TVGLITVTDPDYGENSAVTLSISDMSDEFTIDPQTGVIRPNISFDREKQESY 639
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS 139
L+ ++ + ++V D ND P F L SVPE G + ++ ATDAD GQNA + Y
Sbjct: 445 SLNQSSLLLVKVKDENDNAPVFTQLFISLSVPENNSPGTQLTKISATDADNGQNAEISYL 504
Query: 140 VPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+ D P F +D TG + LD EKQ+ Y
Sbjct: 505 LGVDAPSEFNLDPRTGVLTAVNKLDREKQEKY 536
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 78 DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
++GG SSTA + + V+D ND +P F+ E S+PE G +V ++HATDAD G+N
Sbjct: 222 EDGGFPQRSSTAILQVSVSDTNDNHPVFREQEIEVSIPENAPIGTSVTQLHATDADIGEN 281
Query: 134 AVVYYSVPEDIP------FVVDANTGDIRTNKALDYEK 165
A +++ I F ++ TG I + LD E+
Sbjct: 282 ARIHFYFSNLISNIAKKLFHLNTTTGLITIKELLDREE 319
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 64/150 (42%), Gaps = 30/150 (20%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP---------------I 76
T+ + TD D G+ V + +D + F +DP T P +
Sbjct: 588 TVGLITVTDPDYGENSAVTLSI----SDMSDEFTIDPQTGVIRPNISFDREKQESYTFYV 643
Query: 77 QDEGG----LSSTATVNIRVTDINDKNPEF----QSLPYEFSVPEGQDGLAVGRVHATDA 128
+ E G SSTA + I V D+ND P F + YE +P G + +V ATD
Sbjct: 644 KAEDGGRVSHSSTAKITINVVDVNDNKPGFVVPSSNHSYELVLPSTNPGTVIFKVVATDN 703
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDI 155
D G N+ + YS+ FV+D TG+I
Sbjct: 704 DTGLNSELRYSIVGGNTKGLFVIDQKTGNI 733
>gi|449278207|gb|EMC86141.1| Protocadherin Fat 4, partial [Columba livia]
Length = 4990
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 78/166 (46%), Gaps = 22/166 (13%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------E 71
+ H +G + V A D+D+ GL+ Y + N N T +
Sbjct: 3108 ESHSVGTVIRTVSAQDRDAAMNGLIRYNISSGNEAGIFAINTTTGTLTLAKPLDFELCQK 3167
Query: 72 HQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
H+ + D G +S T V + V D+ND +P F Y +V E G V R++AT
Sbjct: 3168 HELVVTATDGGWVSRTGYCRVTVNVIDVNDNSPAFNPEDYFPNVLENAPSGTTVIRLNAT 3227
Query: 127 DADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
DAD G NAV+ Y++ D+ FV+D NTG I T LDYE +Q Y
Sbjct: 3228 DADSGPNAVIAYAIQSSDSDL-FVIDPNTGTITTQGFLDYETKQSY 3272
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 77/164 (46%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G ++Q+ A D D G LV Y ++ D+ F++DP + E +
Sbjct: 1762 GSKILQLTAMDADEGANALVTYTIISGADDS---FHIDPESGDLIATKRLDRERRSKYSL 1818
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQ 132
D+G SS +NI V+D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1819 LVRADDGLQSSDMRINITVSDVNDHIPKFSRPVYSFDIPEDATPGSLVAAILATDDDSGI 1878
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y+V ED F ++ TG +ALDYE QQ Y+ V
Sbjct: 1879 NGEITYTVSEDDEEGMFFLNPVTGVFNLTRALDYEAQQYYILTV 1922
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 75/179 (41%), Gaps = 39/179 (21%)
Query: 30 GVTLMQVKATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP---IQDEGGLSS 84
G L+ ATD DSG G+ YR++ N + N+ +G + GGL
Sbjct: 109 GRQLILDTATDADSGTNGVDHSSYRIVAGNEEGCFRLNITLNPSGEGAFLHLVSRGGLDR 168
Query: 85 TAT----------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
AT VN+ V DIND P F Y+ VPE G +V
Sbjct: 169 EATPTYQLLVQVEDKGEPRRRGYLQVNVTVQDINDNPPIFSQTLYQARVPEDAPVGASVL 228
Query: 122 RVHATDADEGQNAVVYYSVPE-----------DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V A DADEG NA + Y + +PF VD +G IR + LDYE +Q Y
Sbjct: 229 QVAAADADEGTNADIRYRLEGGDGGGGGEGAGSLPFEVDPESGVIRIRECLDYEMRQQY 287
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 77/165 (46%), Gaps = 30/165 (18%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LD-----------PAT 70
++ V A D+DSG G + Y +++ N + + N LD A+
Sbjct: 2695 ILTVAAVDRDSGLNGQLNYEIIEGNMENSFSINRATGEIRSVRPLDREKLSQYTLTIKAS 2754
Query: 71 EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
+ P+Q S+T V I + D ND P F + + SVPE G V RV +D D
Sbjct: 2755 DKGTPLQ-----STTVKVIINILDENDNAPRFSQI-FSASVPENAPLGFTVTRVTTSDED 2808
Query: 130 EGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
G NAV YS+ + +PF ++ +TGDI ++ L+ E Y RV
Sbjct: 2809 IGVNAVSRYSIRDTSLPFTINPSTGDITISRPLNREDTDRYRIRV 2853
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEG------------ 80
+ + +ATD DSG +EY LL + S ++D G + E
Sbjct: 2075 VFKAQATDPDSGPNSYIEYSLLRPLGNKFSIGSIDGEVRLTGELDREAVSNYTLTVVATD 2134
Query: 81 ----GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
LSS+ V + V DIND NP F Y+ V E G + +V ATD DEG N
Sbjct: 2135 KGQPSLSSSTDVVVIVLDINDNNPLFAQKLYKVEVGENTLTGTDLIQVFATDGDEGTNGQ 2194
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y++ D F +D+ TG I K LD EK+ Y
Sbjct: 2195 VRYAIVSGDADNEFRIDSVTGVITVAKPLDREKKPSY 2231
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 75/160 (46%), Gaps = 25/160 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------EHQGP------IQ 77
+++V A+D D G GL+ Y ++ N + F +D +T +H+ IQ
Sbjct: 1235 VLRVSASDVDEGINGLIHYSVIKGNEE--KRFAIDSSTGQVTLVGKLDHEATASYLLVIQ 1292
Query: 78 --DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D G LSST ++I V D ND +P F V E G V V ATD+D G
Sbjct: 1293 AVDSGAVSLSSTCMLSIDVLDENDNSPSFPKTTLLVDVLENMRVGELVSSVTATDSDSGD 1352
Query: 133 NAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
NA ++YS+ F + NTG I K LD+E Q LY
Sbjct: 1353 NADLHYSITGTNNHGTFSISPNTGSIFLAKKLDFETQSLY 1392
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 87/188 (46%), Gaps = 23/188 (12%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF---NLDPAT 70
D L Y + + +V+A+DKDSG G + Y +++ NT DA F L +
Sbjct: 1003 DQLSYEITILESEPVNSRFFKVQASDKDSGVNGEIAYSIIEGNTGDAFGIFPDGQLYIKS 1062
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DG 117
E +Q+ L++T V + + D+ND P F S Y F E Q G
Sbjct: 1063 ELDRELQERYILLVVASDRAVEPLNATVNVTVILEDVNDNRPLFNSTNYVFYFEEEQRGG 1122
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLER---V 173
+VG+++A D D G N + YS P F ++ TG+IR+ D ++ L +R V
Sbjct: 1123 SSVGKINAVDKDFGPNGEIRYSFEHMHPDFELNTVTGEIRSTHQFD--REALMRQRGAAV 1180
Query: 174 FLISKFAT 181
F ++ AT
Sbjct: 1181 FSLTVIAT 1188
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 77/173 (44%), Gaps = 38/173 (21%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------------------------AASYF 64
G ++ ++ A DKD G G + Y + D A+ F
Sbjct: 1122 GSSVGKINAVDKDFGPNGEIRYSFEHMHPDFELNTVTGEIRSTHQFDREALMRQRGAAVF 1181
Query: 65 NLDPATEHQG---PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-V 120
+L QG P++D+ ATV I V DIND P+F Y+ +V E L V
Sbjct: 1182 SLTVIATDQGLPKPLRDQ------ATVQIYVKDINDNAPKFLKDLYQATVSELAANLTQV 1235
Query: 121 GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
RV A+D DEG N +++YSV E+ F +D++TG + LD+E YL
Sbjct: 1236 LRVSASDVDEGINGLIHYSVIKGNEEKRFAIDSSTGQVTLVGKLDHEATASYL 1288
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 27/165 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGP---- 75
G L+QV ATD D G G V Y ++ DA + F +D P + P
Sbjct: 2176 GTDLIQVFATDGDEGTNGQVRYAIVSG--DADNEFRIDSVTGVITVAKPLDREKKPSYTL 2233
Query: 76 -IQ--DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDA 128
+Q D G ++T TVNI + D+ND P F+ PY +VPE + L + +V A D
Sbjct: 2234 TVQSADRGSSPRTNTTTVNIILKDVNDYVPTFELSPYSVNVPENLETLPKVILQVVARDD 2293
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D+G N+ + Y + E+ F + A +G++R ++LD E ++ Y+
Sbjct: 2294 DQGLNSKLTYVLVGGNEEGAFTLSA-SGELRLVQSLDREMKEQYI 2337
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 72/167 (43%), Gaps = 22/167 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y + D + F ++P+T
Sbjct: 2782 SQIFSASVPENAPLGFTVTRVTTSDEDIGVNAVSRYSIRDTSLP----FTINPSTGDITI 2837
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
P+ E G + + V I V D+ND P F Y PE GL
Sbjct: 2838 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVMDVNDNAPRFTKPSYYLDCPELPGVGL 2897
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYE 164
V +V ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 2898 KVTQVSATDPDEGSNGQVFYFIKSQSEFFRINATTGEIFNKQYLRYQ 2944
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 73/164 (44%), Gaps = 32/164 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++++ ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3218 GTTVIRLNATDADSGPNAVIAYAIQSSDSD---LFVIDPNT---GTITTQGFLDYETKQS 3271
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHAT 126
S A+VNI++ N+ P F S Y F V E G VG V A+
Sbjct: 3272 YHLMVKAFNIPDEERCSFASVNIQLEGTNEYVPRFVSKLYYFEVSEAASKGTVVGEVFAS 3331
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQ 167
D D G + V+Y F +D +G I + LD EK++
Sbjct: 3332 DRDMGTDGEVHYLTFGNSRKKGFQIDEKSGQIYVSGPLDREKEE 3375
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 68/171 (39%), Gaps = 32/171 (18%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGG--- 81
+ + G T+ Q KA D D G G+V Y L N S A GP+ G
Sbjct: 910 ENWKAGHTIFQAKAVDPDEGVNGMVLYSLKQNPKGLFSINEQTGAISLIGPLDINAGSYQ 969
Query: 82 ------------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
LSS + + V D+ND P F L YE ++ E + +V A+D
Sbjct: 970 VEILASDMGVPQLSSNFILTVSVHDVNDNPPVFDQLSYEITILESEPVNSRFFKVQASDK 1029
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYL 170
D G N + YS +++ NTGD + LD E Q+ Y+
Sbjct: 1030 DSGVNGEIAYS-------IIEGNTGDAFGIFPDGQLYIKSELDRELQERYI 1073
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 18/155 (11%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI----QD 78
++QV A D D G + Y L+ N + A + LD + Q + D
Sbjct: 2285 ILQVVARDDDQGLNSKLTYVLVGGNEEGAFTLSASGELRLVQSLDREMKEQYILLITAAD 2344
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAV 135
G L+ T T+ + V D+ND P F Y +VPE G + V+++DAD NAV
Sbjct: 2345 SGSPALTGTGTIAVTVDDVNDNVPTFAFNMYSATVPEDAPTGTDILLVNSSDADASTNAV 2404
Query: 136 VYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ Y + D F ++ +TG I T+ LD E ++ Y
Sbjct: 2405 ISYKLTGGDSQFTINPSTGQIITSALLDRESRENY 2439
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP-- 75
Y A + G ++ V ++D D+ ++ Y+L T S F ++P+T
Sbjct: 2374 MYSATVPEDAPTGTDILLVNSSDADASTNAVISYKL----TGGDSQFTINPSTGQIITSA 2429
Query: 76 --------------IQDEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQD 116
+ +GG LSS+ +V + V D+ND P+FQ PY VP
Sbjct: 2430 LLDRESRENYTLVVVASDGGFPRALSSSTSVLVAVADVNDNPPKFQHHPYVTHVPSPTTS 2489
Query: 117 GLAVGRVHATDADEGQNAVVYYSV 140
G V V TDAD G NA ++YS+
Sbjct: 2490 GSFVFAVTVTDADAGSNAELHYSL 2513
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1730 AEVEITLQDINDNPPVFPTDMLDLTVEENIGDGSKILQLTAMDADEGANALVTYTIISGA 1789
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ K LD E++ Y
Sbjct: 1790 DDSFHIDPESGDLIATKRLDRERRSKY 1816
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 20/159 (12%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY-------FNLDPATEHQGP------- 75
G + + ATD DSG G + Y + +++ + + FNL A +++
Sbjct: 1863 GSLVAAILATDDDSGINGEITYTVSEDDEEGMFFLNPVTGVFNLTRALDYEAQQYYILTV 1922
Query: 76 -IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQN 133
+D GG +T V + DIND P F Y S+ E G A+ TDAD+G N
Sbjct: 1923 RAEDGGGQFTTIRVYFNILDINDNPPVFSMTSYSTSLMENLSPGSAILNFSVTDADDGSN 1982
Query: 134 AVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ + +S+ F +D N+G + + LD E Q Y
Sbjct: 1983 SQLSFSIASGDSGGQFGID-NSGVLSIRQPLDRESQSFY 2020
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 69/172 (40%), Gaps = 32/172 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLD----------NNTDAASYFNLDPATEHQGPIQ-- 77
G L+ + ATD D G G V + L + ++ F LDP + I
Sbjct: 594 GTELLVLSATDGDLGDNGTVRFSLQEAEPALAVVGPSSVTPRRVFRLDPVSGKLSTISQL 653
Query: 78 ---------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
D G L S VN+ + D+ND +P F + Y + E + G
Sbjct: 654 DREEQAHFSLQVLATDLGSPPLFSITRVNVSLLDVNDNSPVFYPVQYFAHIQENEPAGTY 713
Query: 120 VGRVHATDADEGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD D G N V YS+ + F V TG I T ALD E++ Y
Sbjct: 714 VTTVSATDPDLGPNGTVKYSISAGDTSRFQVHGQTGVITTKIALDREEKTAY 765
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
SS + + V D+ND PEF+ P+ + E + V A D D G N + Y +
Sbjct: 2657 FSSYKKLEVMVIDVNDNAPEFEQDPFVAEIMENLSPRKILTVAAVDRDSGLNGQLNYEII 2716
Query: 142 E---DIPFVVDANTGDIRTNKALDYEKQQLY 169
E + F ++ TG+IR+ + LD EK Y
Sbjct: 2717 EGNMENSFSINRATGEIRSVRPLDREKLSQY 2747
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 70/166 (42%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRLLDNNTDAASYFNLDPATEH-------------- 72
+G L++V A D KD G VEY + D + + F LD +T
Sbjct: 3005 RVGTNLIKVTAVDDKDFGLNSEVEYFVSDES--KTNKFRLDRSTGWISVSSSLMADLNKN 3062
Query: 73 ---QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
+ +D+G LSS V I VT+ N PEF ++PE G + V A
Sbjct: 3063 FLFKVKAKDKGNPPLSSEVAVEIVVTEENYHTPEFSQSHMSVTIPESHSVGTVIRTVSAQ 3122
Query: 127 DADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
D D N ++ Y++ E F ++ TG + K LD+E Q +
Sbjct: 3123 DRDAAMNGLIRYNISSGNEAGIFAINTTTGTLTLAKPLDFELCQKH 3168
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYY 138
G ++ A VNI V D+ND +P F +V E + G + + A D DEG N +V Y
Sbjct: 877 GAITGDAMVNITVKDLNDNSPHFIHAVESVNVVENWKAGHTIFQAKAVDPDEGVNGMVLY 936
Query: 139 SVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
S+ ++ F ++ TG I LD +E
Sbjct: 937 SLKQNPKGLFSINEQTGAISLIGPLDINAGSYQVE 971
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 30/163 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G + V TD D+G + Y L+ N++ F++DPA +G I
Sbjct: 2490 GSFVFAVTVTDADAGSNAELHYSLMGKNSEK---FHIDPA---RGAILAANPLAGESEVT 2543
Query: 77 -----QDEGGLSSTATVNIRVTDINDKN-PEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
+D G T + + V +N P Q+ F+ PE Q G V + + A
Sbjct: 2544 ISVHVRDGGKYPKTDSTTVTVRFVNKAEFPHVQADQETFTFPENQAVGTLVTTISGSSAR 2603
Query: 130 EGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYL 170
G ++ YY ++ F+VD TG + +ALD+E Q Y+
Sbjct: 2604 GG--SLSYYIASGNLGSTFLVDQVTGQLSVGRALDFEAIQKYV 2644
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 9/148 (6%)
Query: 38 ATDKDSGKFGLVEYRLLDN----NTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVT 93
A+ G+FG+ +L + ++ S+++L P+ +STA V+I +
Sbjct: 1990 ASGDSGGQFGIDNSGVLSIRQPLDRESQSFYSLVVQVHDMAPLP-ASRFTSTAQVSIILL 2048
Query: 94 DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDA 150
D+ND P F S P VPE V + ATD D G N+ + YS+ P F + +
Sbjct: 2049 DVNDSPPSFIS-PKVTYVPENTPIDTIVFKAQATDPDSGPNSYIEYSLLRPLGNKFSIGS 2107
Query: 151 NTGDIRTNKALDYEKQQLYLERVFLISK 178
G++R LD E Y V K
Sbjct: 2108 IDGEVRLTGELDREAVSNYTLTVVATDK 2135
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG + Y + N F++ P T E Q
Sbjct: 1335 RVGELVSSVTATDSDSGDNADLHYSITGTNNHGT--FSISPNTGSIFLAKKLDFETQSLY 1392
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G SST +V I V D ND P F S+ E G +V V A D
Sbjct: 1393 KLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPNFPPGDIFKSIVENVPVGSSVISVTAHD 1452
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + Y++ + +P F +D G I TN +D E L+
Sbjct: 1453 PDADINGQLTYAIIQQMPRGNHFRIDEVRGTIFTNAEIDREFANLF 1498
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 67/174 (38%), Gaps = 20/174 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G V+Y + +T + LD
Sbjct: 700 YFAHIQENEPAGTYVTTVSATDPDLGPNGTVKYSISAGDTSRFQVHGQTGVITTKIALDR 759
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V I V D D P F Y F V E G VG
Sbjct: 760 EEKTAYQLQIMATDGGHLHSQNQAIVTITVLDTQDNPPVFSQGMYSFVVFENVALGYHVG 819
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A+ D N + Y D F ++ TG I T +D E+Q Y +V
Sbjct: 820 TVFASTMDLNTN-ISYLITTGDQRGMFAINRVTGQITTASIIDREEQAFYQLKV 872
>gi|340374587|ref|XP_003385819.1| PREDICTED: hypothetical protein LOC100641168 [Amphimedon
queenslandica]
Length = 7953
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 30/169 (17%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL-------- 82
V ++ V ATD D+G G + Y L ++ + F +D T G I G L
Sbjct: 5032 VYIVTVNATDPDNGSNGSITYSL----SNTVTLFRIDGVT---GDIYAIGSLDRETTSSQ 5084
Query: 83 --------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDA 128
+S+A VN+ V D+ND +P F PY S+PE + G + V ATDA
Sbjct: 5085 VFVVYAADGGNPSRTSSAAVNVSVIDVNDNSPMFIGDPYSGSIPENEAGYNILTVEATDA 5144
Query: 129 DEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
D G N+ + Y + F +D++TG +R+ LD+E + Y +V +
Sbjct: 5145 DYGSNSQITYILQTHTDLFSIDSSTGQLRSLVGLDFESRCFYQLQVVAV 5193
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 72/161 (44%), Gaps = 25/161 (15%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------EHQG----PIQDE 79
V ATD DS G + Y N D YF +D T E Q + +
Sbjct: 4933 VSATDLDSTSNGEISYSF--ENPDTLQYFTIDNTTGVIRTASELNREEQQSYTLTVLATD 4990
Query: 80 GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVV 136
G L+ +ATV++ V DIND P F + Y SV E + + V+ATD D G N +
Sbjct: 4991 AGDIPLTGSATVDVSVLDINDNTPSFSATEYSASVLENIPNVYIVTVNATDPDNGSNGSI 5050
Query: 137 YYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
YS+ + F +D TGDI +LD E +VF++
Sbjct: 5051 TYSLSNTVTLFRIDGVTGDIYAIGSLDRETTS---SQVFVV 5088
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 18/159 (11%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--------FNLDPATE--HQGPI-- 76
+G ++ + ATD D V + L DN T S LD ++ H PI
Sbjct: 3382 IGSLVLPLSATDADDNGDEPVSFMLADNYTGPFSLDSNLVIVSAGLDRESQMIHYLPIIA 3441
Query: 77 --QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
+ G +T + I + D+ND P+F + P FSV E G +VG + ATD D+ N
Sbjct: 3442 FNPNSTGPITTQNLTITLIDVNDNIPQFSADPILFSVLENHTLGQSVGVLTATDIDQLSN 3501
Query: 134 AVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
A + Y++ + +PF ++ TG+I +LDYE Y
Sbjct: 3502 AKLTYTLSQPDPSLPFAINPLTGEINLTSSLDYELVTSY 3540
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP-F 146
I VTD+ND P F Y+ SVPE V V ATD D N + YS P+ + F
Sbjct: 4900 ITVTDVNDNTPSFSQDSYQGSVPENLLDEYVATVSATDLDSTSNGEISYSFENPDTLQYF 4959
Query: 147 VVDANTGDIRTNKALDYEKQQLYLERVF 174
+D TG IRT L+ E+QQ Y V
Sbjct: 4960 TIDNTTGVIRTASELNREEQQSYTLTVL 4987
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 77 QDEGGLS--STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
QD G S S V I V D ND P F Y +VPE G + V A D D G N
Sbjct: 6182 QDSGTPSRQSNVPVTINVADANDNAPVFSQDMYPATVPEDASFGSTILTVQARDVDSGSN 6241
Query: 134 AVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQ 166
+ + Y + + F++DA TG I LDYE +
Sbjct: 6242 SRIVYEITGTVTFIIDATTGVISLVGELDYETE 6274
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 78/182 (42%), Gaps = 42/182 (23%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A ++ +G + V A D D+ F Y L+ ++ D YF + P
Sbjct: 3069 YTASINERVPIGTLVETVLAFDDDNSPF---TYSLVGDDVD---YFTIGPNSGEVRTARE 3122
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
A+E P +S A + I V DIND P F Y+F + E
Sbjct: 3123 IDYEMKPVFSLLVVASEVAMP-----NMSGYANLLIHVNDINDNRPLFDQDEYQFELLEN 3177
Query: 115 -QDGLAVGRVHATDADEGQNAVVYYSV-----PEDIP-FVVDANTGDIRTNKALDYEKQQ 167
G +VG V A+DAD G NA + YS+ P P F +++ +G+I + ++ D E+
Sbjct: 3178 LPPGTSVGTVSASDADSGINADISYSILSVHPPSHYPSFTINSTSGEITSTQSFDREETD 3237
Query: 168 LY 169
Y
Sbjct: 3238 EY 3239
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 70/160 (43%), Gaps = 35/160 (21%)
Query: 34 MQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP-----IQ 77
+ + ATD D G +G++ Y ++ S F +D T E GP +
Sbjct: 2749 LIINATDDDQGSYGMITYSMVTQ----GSLFKIDSTTGSISVSAAIDFEMVGPTYMFTVS 2804
Query: 78 DEGGLSSTATVNIRVT----DINDKNPEFQSLPYEFS-----VPEGQDGLAVGRVHATDA 128
GL +T + VT D+N+ P F L Y S VP G + L V ATD
Sbjct: 2805 ASDGLKNTHVITTNVTANIMDVNEFPPVFNRLDYSDSAVCENVPLGTEVLT---VQATDG 2861
Query: 129 DEGQNAVVYYSVPED---IPFVVDANTGDIRTNKALDYEK 165
D G ++YS+ + F V++ TG I TN ++D++
Sbjct: 2862 DAGSFGQIFYSIDSNSISCCFDVNSTTGVIYTNSSIDFDT 2901
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY 137
+G SS VN+R+ D+ND P F Y S+PE V V ATD DEG+N V
Sbjct: 6390 DGLHSSNVIVNMRILDVNDNQPSFTQSIYTESIPEIYPVNTFVTTVTATDPDEGENGTVT 6449
Query: 138 YSVPEDI---PFVVDANTGDIRTNKALDYEKQQLY 169
Y++ F + + G IR N LD+E Y
Sbjct: 6450 YAIVGGNVGEAFTIMPSNGMIRVNGPLDHETVSSY 6484
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+STATV + + DIND P F Y +PE G + +V ATDAD + Y +
Sbjct: 5326 LTSTATVYVSIIDINDNPPIFLQRSYSREIPESTPVGTQILQVMATDADFIDQGNLRYQI 5385
Query: 141 PEDIP-FVVDANTGDIRTNKALDYEKQQLYLERVFLISKF 179
+P F + + TG I +A+D+E + R F + F
Sbjct: 5386 LNFVPLFNISSRTGAIYLAEAVDFETIE-STTRTFSVEVF 5424
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 17/163 (10%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLDP 68
Y + + ++Q+ A+D DSG + + L+D++ AS + +
Sbjct: 3579 YNVSVLESIKTSSVIIQLSASDVDSGSNADITFSLIDSSLPFYINGSYVLLGASSLDRES 3638
Query: 69 ATEHQ-GPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRV 123
+E+ + +GG +STA V + V D+ND +P + S+PE Q G V
Sbjct: 3639 VSEYTFNVVATDGGHPSRNSTAQVIVTVQDVNDNSPVIDLVYLNDSIPENTQIGTVVAIF 3698
Query: 124 HATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
+ TDAD G NA+ ++ + F VD + G +R +LD++
Sbjct: 3699 NVTDADIGPNALTTLTLSGEFSHFEVDQD-GVVRLRTSLDFDT 3740
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 25/159 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD-------PATEHQGPIQD--- 78
L ++ + +TD D+ V Y+L++ D FN+ + +++G IQ
Sbjct: 3284 LNTVILTLVSTDADTPPNSHVTYQLVN---DFNGNFNITGDKLIVASSLDYEG-IQSYNL 3339
Query: 79 -----EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQ 132
G L+S A V + V D+ND P F S P E S+PE G V + ATDAD+
Sbjct: 3340 VVMLTNGNLTSYANVTVNVLDVNDNAPIFTS-PSEVSIPEDAPIGSLVLPLSATDADDNG 3398
Query: 133 NAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
+ V + + ++ PF +D+N + + LD E Q ++
Sbjct: 3399 DEPVSFMLADNYTGPFSLDSNL--VIVSAGLDRESQMIH 3435
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 25/161 (15%)
Query: 11 EMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT 70
+ ++D + + + + H LG ++ + ATD D + Y L + D + F ++P T
Sbjct: 3468 QFSADPILFSVL--ENHTLGQSVGVLTATDIDQLSNAKLTYTL--SQPDPSLPFAINPLT 3523
Query: 71 -----------------EHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
+ D G L STA V + V+DIND +P F S Y SV
Sbjct: 3524 GEINLTSSLDYELVTSYSFNAIVTDGGEPALFSTALVIVNVSDINDNSPIFTSDVYNVSV 3583
Query: 112 PEG-QDGLAVGRVHATDADEGQNAVVYYS-VPEDIPFVVDA 150
E + + ++ A+D D G NA + +S + +PF ++
Sbjct: 3584 LESIKTSSVIIQLSASDVDSGSNADITFSLIDSSLPFYING 3624
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 16/101 (15%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSV----PEGQDGLAVGRVHATDADEGQNAVVYY 138
SS+A V+I V DIND P F Y+ +V P GQ L + N+ + Y
Sbjct: 6077 SSSAPVSIVVIDINDNAPLFDLPFYQLNVSEDTPVGQSLLT--VSASDSDVSSINSALTY 6134
Query: 139 SVPEDI----------PFVVDANTGDIRTNKALDYEKQQLY 169
S+ + I PF ++++TG I ALDYEK+Q++
Sbjct: 6135 SLRDIIDMSGSGQSLLPFTINSSTGVITLTMALDYEKEQMF 6175
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 49/110 (44%), Gaps = 14/110 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL-------LDNNTDAASYFN-LDPA 69
Y A + G T++ V+A D DSG + Y + +D T S LD
Sbjct: 6213 MYPATVPEDASFGSTILTVQARDVDSGSNSRIVYEITGTVTFIIDATTGVISLVGELDYE 6272
Query: 70 TEHQ---GPIQDEGGLS---STATVNIRVTDINDKNPEFQSLPYEFSVPE 113
TE + + G+ STA VNI VT++ND P F + Y F+V E
Sbjct: 6273 TETSIVFDVLARDSGIQEQVSTAVVNITVTNVNDNPPSFLNQVYNFTVYE 6322
Score = 35.8 bits (81), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 96 NDKNPEFQSLPYEFSVPEGQD-GLAVGRV-HATDADEGQNAVVYYS-VPEDIPFVVDANT 152
N P F S Y F++ E VG + +ATD D+G ++ YS V + F +D+ T
Sbjct: 2722 NAHAPVFTSTDYSFTINENTAIDTPVGLIINATDDDQGSYGMITYSMVTQGSLFKIDSTT 2781
Query: 153 GDIRTNKALDYE 164
G I + A+D+E
Sbjct: 2782 GSISVSAAIDFE 2793
>gi|345786948|ref|XP_533840.3| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Canis lupus familiaris]
Length = 3438
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 57/176 (32%), Positives = 86/176 (48%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQ--GP 75
Y A R+ +++V ATD+D GLV Y ++ N+ +F +D T E Q P
Sbjct: 672 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRG--HFAIDSLTGEIQVVAP 729
Query: 76 I--------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ QD G ++T +I+V DIND P F S P++ SV E G
Sbjct: 730 LDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLENAPLG 789
Query: 118 LAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+V + A DAD G+NA + YS+ D+PFV+++ TG + + LD E + Y
Sbjct: 790 HSVIHIQAVDADHGENARLEYSLTGMAPDMPFVINSATGWVSVSGPLDRESVEHYF 845
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQG 74
+++Q+ ATD+D+ G V+Y N D F ++P + E
Sbjct: 1101 SVLQISATDRDAHANGRVQYTF-QNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTA 1159
Query: 75 PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G L + ++ + V D+ND P F + +E V E G V ++ A D DEG
Sbjct: 1160 YAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDEG 1219
Query: 132 QNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE +Q Y+
Sbjct: 1220 PNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYV 1261
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 54/185 (29%), Positives = 84/185 (45%), Gaps = 32/185 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL---DNNTDAASYFNLDPAT----- 70
Y R+ E G ++Q++ATD D+ + YR + A++ F +DP +
Sbjct: 560 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARAAASAAFEIDPRSGLIST 619
Query: 71 ------EH------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH QG Q+ G S+T V+I V D ND P+F Y V
Sbjct: 620 SGRVDREHMESYELVVEASDQG--QEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVR 677
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E + V RV ATD D+ N +V+Y++ F +D+ TG+I+ LD+E ++
Sbjct: 678 EDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVVAPLDFEAERE 737
Query: 169 YLERV 173
Y R+
Sbjct: 738 YALRI 742
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V+I +TD N P FQS Y SV E + G V + A+D D G+NA + Y + +++P
Sbjct: 966 VHINITDANTHRPVFQSAHYSVSVNEDRPVGSTVVVISASDDDVGENARITYLLEDNLPQ 1025
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DA++G I LDYE Q Y
Sbjct: 1026 FRIDADSGAITLQAPLDYEDQVTY 1049
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 29/180 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDP--------- 68
Y A+ + G T+++V A D D+G+ G + Y L N+ + F++DP
Sbjct: 452 YQALVPENEAAGTTVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPLSGLIRTEA 511
Query: 69 ATEHQG--------PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
A + + QD G LS+T V + VTD ND P F+ Y ++ E ++G
Sbjct: 512 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVTDRNDHAPVFEQAQYRETLRENVEEG 571
Query: 118 LAVGRVHATDADEGQNAVVYY--------SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ ++ ATD D NA + Y F +D +G I T+ +D E + Y
Sbjct: 572 YPILQLRATDGDAPPNANLRYRFVGPPAARAAASAAFEIDPRSGLISTSGRVDREHMESY 631
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEH 72
S Y + +G T++ + A+D D G+ + Y L DN F +D A
Sbjct: 982 SAHYSVSVNEDRPVGSTVVVISASDDDVGENARITYLLEDN----LPQFRIDADSGAITL 1037
Query: 73 QGPIQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQD 116
Q P+ E ++ T + R V D+ND P+F + Y V E
Sbjct: 1038 QAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAP 1097
Query: 117 GL-AVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ++ ATD D N V Y+ D F ++ +G +RT + LD E +Y
Sbjct: 1098 PFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVY 1155
Score = 42.4 bits (98), Expect = 0.075, Method: Composition-based stats.
Identities = 47/178 (26%), Positives = 69/178 (38%), Gaps = 32/178 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQDEG----- 80
LG +++ ++A D D G+ +EY L D F ++ AT GP+ E
Sbjct: 788 LGHSVIHIQAVDADHGENARLEYSLTGMAPDMP--FVINSATGWVSVSGPLDRESVEHYF 845
Query: 81 -----------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR--VHATD 127
LS++A+V + V D+ND PEF Y + E AVG V T
Sbjct: 846 FGVEARDHGTPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDA---AVGTTVVSVTA 902
Query: 128 ADEGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
D N+ + Y + G + LDY KQ+ Y + V S A
Sbjct: 903 VDRDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLDY-KQERYFKLVLTASDRA 959
Score = 40.0 bits (92), Expect = 0.37, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP--- 145
+R +++P+F Y+ VPE + G V RV A D D G+ + YS+ +
Sbjct: 435 VRPRRAANRHPQFPQYNYQALVPENEAAGTTVLRVVAQDPDAGEAGRLVYSLAALMNSRS 494
Query: 146 ---FVVDANTGDIRTNKALDYEKQQLYLERV 173
F +D +G IRT ALD E + + RV
Sbjct: 495 LELFSIDPLSGLIRTEAALDRESMERHYLRV 525
Score = 38.1 bits (87), Expect = 1.6, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 65/158 (41%), Gaps = 28/158 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPI- 76
+G + Q+ A D D G + Y++++ N + + +LD + I
Sbjct: 1204 VGSVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIV 1263
Query: 77 --QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRVHA 125
L S ATV++R+ D ND +P + F + P G +GR+ A
Sbjct: 1264 VQATSAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSG----VIGRIPA 1319
Query: 126 TDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALD 162
D D + + ++ VV+ +G++R ++ LD
Sbjct: 1320 YDPDVSDHLFYSFERGNELQLLVVNQTSGELRLSRKLD 1357
>gi|348518810|ref|XP_003446924.1| PREDICTED: protocadherin-16-like [Oreochromis niloticus]
Length = 3281
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 85/179 (47%), Gaps = 21/179 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-----------ASYFNL 66
FYG + +++ V L +KATD DSG G +EYR+ + D ++ L
Sbjct: 1737 FYG-LEVPENQAPVELCILKATDPDSGPGGELEYRIAAGDPDGDFQLHASTGALSTSRGL 1795
Query: 67 DPATEHQGPIQ----DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLA 119
D T + ++ D G LS+T TV + V D+ND NP F Y + E +G
Sbjct: 1796 DRETHAKYTLEVVATDRGSPALSATVTVEVNVLDVNDNNPVFSKSSYSVEISEDATEGAQ 1855
Query: 120 VGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
V V ATDADE N V Y + + F VD + G I T+ LD EK Y +VF +
Sbjct: 1856 VLEVSATDADEDLNGKVLYFLSREAHGAFTVDEHNGRITTSAPLDREKLASYSFQVFAV 1914
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 79/166 (47%), Gaps = 22/166 (13%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPI- 76
+G ++ V A D D G+ G V YR+ N +A F+L+P T E Q
Sbjct: 1541 VGFVILYVMARDSDEGENGRVSYRIQAGN--SAGRFSLNPDTGSLSILKSLDREEQEVFN 1598
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D G LS++ + ++V D+ND+ P F +E V E Q G +V V ATD
Sbjct: 1599 LTIVAEDHGTPQLSTSQVLCVQVIDVNDEAPVFLRAEFEAQVMENQGPGASVLTVTATDR 1658
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
D+G N + Y + F+++ TG I T K LD E Q Y V+
Sbjct: 1659 DQGSNGQITYGGVSEEGFIINPVTGTITTTKELDTELQDHYTLTVY 1704
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 78/169 (46%), Gaps = 23/169 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-ASYFNLDPAT---- 70
S FY A ++ G ++V ATD+D G FG + Y L ++ + + F ++ T
Sbjct: 554 SNFYNASIKENTPAGTCFLEVSATDEDRGSFGTISYNLGSSSGNTLPTQFTINKETGQLC 613
Query: 71 --------EHQGPI------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQ 115
E Q D GGLSS A V + V DIND P F + Y S+
Sbjct: 614 TSTALDRDEGQDKFDLTVTATDGGGLSSVARVRVTVVDINDNRPIFYPVLYTVSLSTHSA 673
Query: 116 DGLAVGRVHATDADEGQNA-VVYYSVPEDIP--FVVDANTGDIRTNKAL 161
G +V +V A D D G+N V Y +VP F ++ +TG I +++L
Sbjct: 674 PGTSVVKVTANDPDVGENGRVTYRTVPGGGSSFFTLNKDTGVISLSRSL 722
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 25/155 (16%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--- 77
A R+ + + A D D+G FG ++Y +L+ + F +D ++ G I+
Sbjct: 2684 ASIRENQPANSAVTVLHAIDHDTGVFGQLKYYMLERSGAGKESFAVD---QNSGEIRSKI 2740
Query: 78 -----------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
D G S+T TV + VT ++ +P F S + F VPEG + G +
Sbjct: 2741 PFDFEKVNTFSFVAVAVDSGNHSATVTVQVFVTGEDEYDPLFTSSDFSFEVPEGAKKGQS 2800
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTG 153
+G+V A+D DEG + +V YS+ P F V+ TG
Sbjct: 2801 IGQVQASDEDEGVDGIVLYSLTASSPYFDVNKTTG 2835
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 73/164 (44%), Gaps = 26/164 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------EHQGP-- 75
G ++QV A DKD G G V Y LL + +F++DP T P
Sbjct: 461 GSFVLQVTARDKDQGPNGDVRYSLLKGKNSHSDWFSIDPVTGIITTATALDFESEPAPSV 520
Query: 76 ---IQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
D G LSSTA V+I + D+ND P F S Y S+ E G V ATD D
Sbjct: 521 TVVAMDSGRPPLSSTAKVDIVLQDVNDNTPVFSSNFYNASIKENTPAGTCFLEVSATDED 580
Query: 130 EGQNAVVYYSVPED----IP--FVVDANTGDIRTNKALDYEKQQ 167
G + Y++ +P F ++ TG + T+ ALD ++ Q
Sbjct: 581 RGSFGTISYNLGSSSGNTLPTQFTINKETGQLCTSTALDRDEGQ 624
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV----- 140
T+ + VTDIND P F Y + E G ++ +V ATD DEG N +V Y +
Sbjct: 213 TLEVTVTDINDHAPVFNQSRYHSIISESLPQGSSILQVFATDEDEGDNGLVLYEINRRQS 272
Query: 141 -PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
PE FV+D +G I NK LDYE ++++
Sbjct: 273 DPEHY-FVIDVKSGVITLNKPLDYELKRVH 301
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 77/174 (44%), Gaps = 32/174 (18%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EH 72
R+ G +V ATD+D+G + YRLL +TD +F ++ T E
Sbjct: 1104 RENLHAGTGFGRVSATDRDAGLNARLTYRLL--HTD--RHFQINSQTGEISTRLALDREQ 1159
Query: 73 QGPIQ-----DEGGL---SSTATVNIRVTDINDKNPEF-QSLP-----YEFSVPEG-QDG 117
Q Q +GG S+T T +I V D ND P F + P V EG G
Sbjct: 1160 QSSYQVIVVVQDGGTPPRSATGTAHITVLDENDHAPSFIHARPDRDNNTSLQVTEGLPSG 1219
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+G V A D DEG+N +YYS+ F ++ TG++RT L ++ Y
Sbjct: 1220 TVIGTVAAKDPDEGENGTIYYSLSGSRAERFSINPTTGELRTASPLRLTERAEY 1273
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNA-VVYY 138
G + +ATV + VTD ND +P +V E G GRV ATD D G NA + Y
Sbjct: 1073 GRTGSATVRVTVTDENDNSPRLSQERVFLAVRENLHAGTGFGRVSATDRDAGLNARLTYR 1132
Query: 139 SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ D F +++ TG+I T ALD E+Q Y
Sbjct: 1133 LLHTDRHFQINSQTGEISTRLALDREQQSSY 1163
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 69/162 (42%), Gaps = 27/162 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------EHQGPIQD---- 78
G +++ V ATD+D G G + Y + F ++P T E +QD
Sbjct: 1647 GASVLTVTATDRDQGSNGQITYGGVSEEG-----FIINPVTGTITTTKELDTELQDHYTL 1701
Query: 79 -----EGGLS---STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADE 130
+GGL + V + V D+ND P F Y VPE Q + + + ATD D
Sbjct: 1702 TVYARDGGLPPNFAKTVVRVAVQDVNDNAPIFAKPFYGLEVPENQAPVELCILKATDPDS 1761
Query: 131 GQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
G + Y + P F + A+TG + T++ LD E Y
Sbjct: 1762 GPGGELEYRIAAGDPDGDFQLHASTGALSTSRGLDRETHAKY 1803
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 8/116 (6%)
Query: 59 DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ S +NL +G Q SS+ I + D+ND P F Y ++ EG G
Sbjct: 2535 ETKSLYNLTVVVSDRGVPQR----SSSVAAVITIGDVNDNPPAFTRAEYTVTLIEGATAG 2590
Query: 118 LAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ R+ ATD D NA V YS+ E F VD +G ++ +ALD E Q ++
Sbjct: 2591 TEIIRLTATDPDSTPNAEVQYSISSGNEVNLFTVDPWSGALKLQRALDREHQPTHV 2646
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 36/163 (22%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G ++++V A D D G+ G V YR + +S+F L+ T G I
Sbjct: 675 GTSVVKVTANDPDVGENGRVTYRTVPGG--GSSFFTLNKDT---GVISLSRSLHGKANTV 729
Query: 77 -------QDEGGLSSTATVNIRVTDIND----KNPEFQSLPYEFSVPEG-QDGLAVGRVH 124
+D GGL TA VN RV +P F+ Y F+V E G AVG V
Sbjct: 730 ISMVISAEDGGGL--TAPVNARVNVSVVGGSVASPVFEQAQYFFTVSEDVLRGTAVGVVR 787
Query: 125 ATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
A+ A G+ ++YS+ P F VD+ +G IR+ LD+E
Sbjct: 788 AS-AKTGEALDIFYSISSGDPHGYFTVDSASGTIRSALPLDHE 829
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 74/174 (42%), Gaps = 33/174 (18%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
+L GA A G ++++ ATD DS V+Y + N + F +DP +
Sbjct: 2582 TLIEGATA------GTEIIRLTATDPDSTPNAEVQYSISSGN--EVNLFTVDPWSGALKL 2633
Query: 71 ------EHQGPIQ-------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG 117
EHQ P D G + A V + V D+ND +P F S+ E Q
Sbjct: 2634 QRALDREHQ-PTHVVIVQATDGQGHFALAPVIVEVKDVNDNHPFFPVDVLIASIRENQPA 2692
Query: 118 -LAVGRVHATDADEGQNAVVYYSVPEDI-----PFVVDANTGDIRTNKALDYEK 165
AV +HA D D G + Y + E F VD N+G+IR+ D+EK
Sbjct: 2693 NSAVTVLHAIDHDTGVFGQLKYYMLERSGAGKESFAVDQNSGEIRSKIPFDFEK 2746
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE 142
S+ T + VTD ND P F S P SV E Q G + V A D+DEG+N V Y +
Sbjct: 1509 SSVTARVFVTDENDNAPVFSS-PSAVSVMEDQPVGFVILYVMARDSDEGENGRVSYRIQA 1567
Query: 143 DIP---FVVDANTGDIRTNKALDYEKQQLY 169
F ++ +TG + K+LD E+Q+++
Sbjct: 1568 GNSAGRFSLNPDTGSLSILKSLDREEQEVF 1597
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV 140
L + ++ I+VTD+ND P F Y ++PE G V +V A D D+G N V YS+
Sbjct: 425 LRAESSFTIQVTDVNDNPPLFDQQAYRQTIPEVVYPGSFVLQVTARDKDQGPNGDVRYSL 484
Query: 141 -----PEDIPFVVDANTGDIRTNKALDYEKQ 166
F +D TG I T ALD+E +
Sbjct: 485 LKGKNSHSDWFSIDPVTGIITTATALDFESE 515
Score = 42.4 bits (98), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDI 144
A + I V DIND P F Y+ ++PE G AV V ATD D G+N + Y V
Sbjct: 2336 ANITILVEDINDNAPAFTHDLYQVTLPEHTPPGSAVITVTATDRDSGENGRITYKVMSST 2395
Query: 145 P--FVVDANTGDIRTNKALDYEKQQ 167
F +D G + N ++++ ++
Sbjct: 2396 KEGFYIDPGNGTLFINHRVEFDPER 2420
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 61/146 (41%), Gaps = 24/146 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------- 71
Y ++ + G +++QV ATD+D G GLV Y + +D YF +D +
Sbjct: 233 YHSIISESLPQGSSILQVFATDEDEGDNGLVLYEINRRQSDPEHYFVIDVKSGVITLNKP 292
Query: 72 --------HQGPIQDEGGLS----STATVNIRVTDINDKNPE----FQSLPYEFSVPEG- 114
H+ +Q S + A V I V D ND P F S + EG
Sbjct: 293 LDYELKRVHELVVQARDNASHPEVTNAFVTIHVRDYNDNQPTMTIIFLSEDGSPRISEGA 352
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV 140
Q G V R+ TD D G+ A V S+
Sbjct: 353 QPGQYVARISVTDPDYGEYANVNVSL 378
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 69/172 (40%), Gaps = 31/172 (18%)
Query: 14 SDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQ 73
S S + ++ D E G +++V ATD D G V Y L + +A F +D EH
Sbjct: 1838 SKSSYSVEISEDATE-GAQVLEVSATDADEDLNGKVLYFL---SREAHGAFTVD---EHN 1890
Query: 74 GPIQDEGGL-----------------------SSTATVNIRVTDINDKNPEFQSLPYEFS 110
G I L +S+A V + V D+ND P F P
Sbjct: 1891 GRITTSAPLDREKLASYSFQVFAVDLSPAAPRNSSAQVTVTVLDVNDNTPFFIQDPLVIE 1950
Query: 111 VPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKAL 161
V + + + A D D G N V+Y + F +++ TG+I+ + L
Sbjct: 1951 VSNRRSQRVLATMKAEDKDFGANGSVFYRFATPVKGFSINSLTGEIQATERL 2002
Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 23/104 (22%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G ++ V ATD+DSG+ G + Y+++ + + F +DP + + P
Sbjct: 2368 GSAVITVTATDRDSGENGRITYKVMSSTKEG---FYIDPGNGTLFINHRVEFDPERPSVS 2424
Query: 76 ----IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
+D G LSS TV ++++D+ND P F Y +V E
Sbjct: 2425 IVIEARDRGLPPLSSFTTVQVQISDVNDNAPVFHQSEYRATVSE 2468
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 74/184 (40%), Gaps = 32/184 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQ--------- 77
G + V A D D G+ G + Y L + A F+++P T P++
Sbjct: 1219 GTVIGTVAAKDPDEGENGTIYYSL---SGSRAERFSINPTTGELRTASPLRLTERAEYAF 1275
Query: 78 -----DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
D G LSST + I+V + +P+ L + EG G +G V D
Sbjct: 1276 TVTAADHGAPTLSSTCQLRIQVLSSSRSSPKPNVLSMTLNTVEGAVPGSVIGSVRPPDQH 1335
Query: 130 EG---QNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQ---LYLERVFLISKFA 180
E + V Y V D F+VD GD+ + LDYEK L++E F
Sbjct: 1336 ESALLEGQVTYLVVGGTDRDGTFMVDHLKGDVYVVRELDYEKGSRYTLHIEVSDFSQAFP 1395
Query: 181 TSYL 184
+S+L
Sbjct: 1396 SSHL 1399
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 89 NIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP-- 145
N+ + D+ND P FQ Y + E Q + + +V A D D+GQN V YS+
Sbjct: 2134 NLILQDVNDNLPRFQLQNYVAYMKEAQGYEMPIIQVVAEDVDQGQNGQVTYSIQSSSMSG 2193
Query: 146 -FVVDANTGDIRTNKALDYE 164
F +D TG I T +D E
Sbjct: 2194 LFKIDPVTGSITTAAIMDRE 2213
>gi|345327140|ref|XP_001505705.2| PREDICTED: protocadherin Fat 4 [Ornithorhynchus anatinus]
Length = 1703
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 78/162 (48%), Gaps = 24/162 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQDEG--------- 80
++ V A D+DSG G ++Y ++ N + +F + AT P+ E
Sbjct: 367 VLAVAAADRDSGPNGQLDYGIVAGNEEG--HFAIHRATGEIRSTRPLDRESVPRYRLTVR 424
Query: 81 -------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
S+TA V + V D ND +P F L + SVPE G V R +D DEGQ
Sbjct: 425 ASDRGDPPRSATARVVVNVLDENDHSPRFSQL-FSASVPENAPVGFTVTRATTSDEDEGQ 483
Query: 133 NAVVYYSVPED-IPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NAV YS+ + +PF +D +TGDI ++ LD E Y RV
Sbjct: 484 NAVSRYSIADSGLPFAIDPSTGDITVSRPLDREDVARYRIRV 525
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 24/167 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + +G T+ + +D+D G+ + Y + D+ F +DP+T
Sbjct: 454 SQLFSASVPENAPVGFTVTRATTSDEDEGQNAVSRYSIADSGLP----FAIDPSTGDITV 509
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V + VTD+ND P F+ Y PE + G
Sbjct: 510 SRPLDREDVARYRIRVSAHDSGWTVSTDVAVAVTDVNDNAPRFREPSYFLECPELPEVGS 569
Query: 119 AVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDY 163
V RV ATD DEG N V+Y + P + F VDA TG+I + L Y
Sbjct: 570 GVARVAATDPDEGPNGQVFYLLKSPSEF-FRVDAVTGEIFNKQPLRY 615
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 28/177 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
SLF +++ D G ++ +D D+ LV Y+L T S F+++P+T
Sbjct: 45 SLFTASISEDA-PAGTDVLLANCSDADASSNALVSYQL----TGGESQFSINPSTGQIIT 99
Query: 73 QGPIQDE-------------GG----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-G 114
GP+ E GG LSS+ATV + V D+ND P FQ PY VP
Sbjct: 100 SGPLDRETQANYTLIVVARDGGDPLALSSSATVLVSVADVNDNPPRFQHHPYVTHVPSPA 159
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
GL V V TD D G N+ +++S+ F +D G I + L E + +
Sbjct: 160 AAGLFVFAVTVTDPDTGPNSELHFSLSGSHSERFRIDPTRGAITAAEPLAGEAEVTF 216
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 71/160 (44%), Gaps = 22/160 (13%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLDPATEHQGP 75
+G + + A D D + GL+ Y + N + A + + H+
Sbjct: 782 VGAVVCVLAARDADPAENGLLAYAVSAGNGEGLFAVNASTGVLTLAGALDYETGRSHEVT 841
Query: 76 IQ-DEGGLSST---ATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE 130
+ +GG ++ V + V D+ND P F Y V E G V + ATDAD
Sbjct: 842 VSATDGGWAARTGFCAVTVDVLDVNDNPPVFAGAEYTPEVAENAPSGTPVVTLRATDADS 901
Query: 131 GQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQ 167
G NAVV Y++ E D+ F VD NTG + T LDYE ++
Sbjct: 902 GPNAVVAYALHEADGDL-FAVDPNTGVVSTQGFLDYETRR 940
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 71/171 (41%), Gaps = 32/171 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G ++ ++ATD DSG +V Y L + + D F +DP T G + +G L
Sbjct: 888 GTPVVTLRATDADSGPNAVVAYALHEADGD---LFAVDPNT---GVVSTQGFLDYETRRE 941
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
+ A V +RVT +N+ P F S Y F V E G VG+V A
Sbjct: 942 HRLTVKAFNVPDEERCAFAAVTVRVTGVNEYIPRFVSAAYGFEVSEAAPPGTPVGQVFAG 1001
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
D D G + V Y + F V+ TG I LD E++ RV
Sbjct: 1002 DRDRGPDGEVSYLLFGESRRKGFRVERETGQISVAGPLDREREGTVALRVL 1052
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 78/171 (45%), Gaps = 38/171 (22%)
Query: 29 LGVTLMQVKATDKDSGKFGL---VEYRLLDNNTDAASYFNLDPATEH---QGPIQDE--- 79
+G ++QV A D G FGL VEY L + A+ F LD T P+ +
Sbjct: 676 VGTRVIQVAAADD--GDFGLNSRVEYLL--TGQEPAARFGLDAETGWVSVAAPLTGDVDR 731
Query: 80 ----------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRV--- 123
GG LS+ ATV I VT+ N PEF VPE LAVG V
Sbjct: 732 TFRLSVTARDGGRPPLSAGATVRILVTEANAHTPEFPRDRVRVEVPE---TLAVGAVVCV 788
Query: 124 -HATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
A DAD +N ++ Y+V E + F V+A+TG + ALDYE + +
Sbjct: 789 LAARDADPAENGLLAYAVSAGNGEGL-FAVNASTGVLTLAGALDYETGRSH 838
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 10/112 (8%)
Query: 63 YFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV----PEGQDGL 118
Y DPA GP L+ T TV + V D ND P F + S+ P G D L
Sbjct: 5 YAESDPACSLPGP--GSPALTGTGTVIVTVEDENDNTPTFARSLFTASISEDAPAGTDVL 62
Query: 119 AVGRVHATDADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ +DAD NA+V Y + + F ++ +TG I T+ LD E Q Y
Sbjct: 63 L---ANCSDADASSNALVSYQLTGGESQFSINPSTGQIITSGPLDRETQANY 111
Score = 42.7 bits (99), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV- 140
SS + + V D+ND P+F+ P+ + E V V A D D G N + Y +
Sbjct: 329 FSSYERLEVEVQDVNDNAPDFREDPFVAEIAENLPPRRVLAVAAADRDSGPNGQLDYGIV 388
Query: 141 --PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E+ F + TG+IR+ + LD E Y
Sbjct: 389 AGNEEGHFAIHRATGEIRSTRPLDRESVPRY 419
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 72/176 (40%), Gaps = 31/176 (17%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNN----TDAAS--YFNLDP-----------AT 70
E+G + +V ATD D G G V Y L + DA + FN P A
Sbjct: 566 EVGSGVARVAATDPDEGPNGQVFYLLKSPSEFFRVDAVTGEIFNKQPLRYLNGTGSVHAN 625
Query: 71 EHQGPI--QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHA 125
H + D G L S TV + V D ND P F S Y VP+ G V +V A
Sbjct: 626 RHSFVVTCSDRGSPPLLSETTVTVHVVDGNDHPPRFLSAGYSTPVPKDVSVGTRVIQVAA 685
Query: 126 T-DADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D D G N+ V Y + P F +DA TG + L + ++R F +S
Sbjct: 686 ADDGDFGLNSRVEYLLTGQEPAARFGLDAETGWVSVAAPLTGD-----VDRTFRLS 736
>gi|118084813|ref|XP_425621.2| PREDICTED: protocadherin-20 [Gallus gallus]
Length = 941
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 75/160 (46%), Gaps = 26/160 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQGP 75
L ++ ATD DSG+ G V Y L DA SYF+LD T +
Sbjct: 544 LTKLHATDADSGERGEVSYFL---GPDAPSYFSLDKTTGVLTVATQLDREEKEKYRYTVK 600
Query: 76 IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQ 132
D G S ATV I V D ND +P F + + F VPE G +G + TDAD GQ
Sbjct: 601 AVDSGFPPRESIATVTITVLDKNDNSPRFINKDFSFFVPENFPGFGEIGVISVTDADAGQ 660
Query: 133 NAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
N V SV DI FV+D G +R +LD E+Q Y+
Sbjct: 661 NGWVALSVLNGSDI-FVIDTGKGVLRAKVSLDREQQSSYV 699
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 73/168 (43%), Gaps = 32/168 (19%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA----------ASYFNLDPATEHQGPIQ 77
E+GV + TD D+G+ G V +L N +D + +LD + +
Sbjct: 647 EIGV----ISVTDADAGQNGWVALSVL-NGSDIFVIDTGKGVLRAKVSLDREQQSSYVLW 701
Query: 78 DE---GG---LSSTATVNIRVTDINDKNPEFQSLP-----YEFSVPEGQDGLAVGRVHAT 126
E GG LSSTA + I + DIND NP P Y +P G + V+A
Sbjct: 702 IEAVDGGDPALSSTAKITILLLDIND-NPPLVLFPQSNMSYLLVLPSTLPGSPITEVYAV 760
Query: 127 DADEGQNAVVYYSV-----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D D G NAV+ YS+ P F +D TG+I ++L LY
Sbjct: 761 DKDTGMNAVIAYSIIGRRGPRPESFRIDPKTGNITLEESLMQNDYGLY 808
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 66/165 (40%), Gaps = 37/165 (22%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP---------------------- 75
A D D G G+ YRL DN F LD G
Sbjct: 224 ALDPDVGTNGVQTYRLRDN----YGVFTLDVEENESGERTPYLIVMGALDRETREEYVTV 279
Query: 76 -IQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADE 130
I ++GG L +AT+ I ++DIND P+F ++ G V VHA D D
Sbjct: 280 IIAEDGGTPPLVGSATLTIGISDINDNCPQFSDTQLNITLYGNSSLGTHVATVHAVDLDL 339
Query: 131 GQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
G NA + YS + +P F +D +TG I + +D +L+
Sbjct: 340 GSNAQITYSYSQKVPQPSRDLFHLDESTGVITLSSKVDGNTPRLH 384
>gi|345307957|ref|XP_001508966.2| PREDICTED: protocadherin Fat 2 [Ornithorhynchus anatinus]
Length = 4144
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI 144
ATV +RV D ND P F++LPY SVPEG D G V +V ATD D G N V Y ED
Sbjct: 2049 ATVRVRVEDANDNRPTFENLPYFTSVPEGTDPGDVVFQVSATDRDLGANGTVTYGFAEDY 2108
Query: 145 P-FVVDANTGDIRTNKALDYEKQQLYLERVF 174
F +D GDI K LDY YL +V
Sbjct: 2109 QYFRIDPYLGDISLRKPLDYRALNKYLLKVI 2139
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 83/172 (48%), Gaps = 27/172 (15%)
Query: 14 SDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT--- 70
S +FY ++ R+ L +++Q+ A D+DS G + + ++ N F +DP T
Sbjct: 1133 SRPVFYPSV-REDAPLNTSVLQLDAWDQDSSSKGKLTFHIISGNQHGN--FAIDPITGLL 1189
Query: 71 ------------EH--QGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
EH + + D G GL ST+ V I+V D+ND +P F ++ +PE
Sbjct: 1190 STSRQLDRENKAEHILEVAVMDNGEPGLQSTSRVVIQVLDVNDNHPAFSHKLFKVRLPER 1249
Query: 115 QDGLA---VGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKAL 161
+G + R+ A+D DEG N + YS+ E+ F + TG + +++
Sbjct: 1250 SNGRVFEPLYRLVASDRDEGPNGQITYSLEENDEGNFSIHPTTGVVYSSRVF 1301
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG-LAVGRVHATDADEGQNAVVYYS 139
G S ATV++ V DIND P F Y SV EG V R+ A D D G+N V Y
Sbjct: 2246 GSFSEATVHVEVEDINDNPPVFSQTVYTASVSEGLPAHTPVIRLLAADRDSGRNGAVSYQ 2305
Query: 140 VPEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ ED F VD TG + T + LDYE ++ + +V
Sbjct: 2306 IVEDGSDASEFFQVDGRTGQMATARELDYELRRQFRVKV 2344
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV-- 140
++ TV + + D N+ P F Y + E G +V V ATD D G+N V YS+
Sbjct: 437 TSTTVFVDIVDCNNHAPMFSQSSYHGTFDENISPGTSVLTVTATDNDSGENGFVTYSIAY 496
Query: 141 PEDIPFVVDANTGDIRTNKALDYE-KQQLYLERVF 174
P+ +PF +D +G I T+K +DYE Q+LY +V+
Sbjct: 497 PKSVPFSIDPYSGIISTSKLMDYELMQRLYHFQVW 531
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 73/161 (45%), Gaps = 25/161 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------EHQGP------- 75
T+ + ATD DSG G++ Y L + N AS F++D T +H+
Sbjct: 728 TIAHLTATDHDSGFNGMLVYSLAEGN--EASCFDIDLETGLLRVVAPLDHEASSFYVLNV 785
Query: 76 -IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEG 131
+ D G SS + + V D ND P F Y +PE Q G V R+ A DAD+
Sbjct: 786 TVHDLGIPQKSSWKQLAVNVGDANDNVPRFPPGGYRVRIPEDTQPGTTVMRLRADDADKE 845
Query: 132 QNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
N V Y++ P D F V A TG++ +LD E Y+
Sbjct: 846 DNGKVRYALLTPSD-KFSVHAVTGELVVTGSLDRESWPRYV 885
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 68/145 (46%), Gaps = 21/145 (14%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------ 68
D Y A + G ++++ A D D G +G V+Y ++ N A+ F +D
Sbjct: 2477 DQHVYEAELAENAMAGTKVIELLAVDPDDGPYGTVDYIII--NKLASEKFAVDAKGRITT 2534
Query: 69 --------ATEHQGPIQ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
+TE I+ D GG + TV I +TD+ND P+F++ Y SV
Sbjct: 2535 LQELDRENSTERVIAIKIMARDGGGKVAFCTVKIILTDVNDNPPQFKASEYTVSVQSNVG 2594
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV 140
G V +V A DADEG NA V YSV
Sbjct: 2595 KGAPVIQVLAYDADEGLNADVTYSV 2619
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 13/136 (9%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKN 99
D+D+G + + +D+ T ++ HQ E L S +VNI+V D+ND
Sbjct: 2738 DRDTGALKV--NKSVDHETTRWYQLDVMAHCSHQ-----ETELVSLVSVNIQVKDVNDNQ 2790
Query: 100 PEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIPFV-----VDANTG 153
P F++ PY+ + E G V +V A D D G + V YS+ + +V +D +G
Sbjct: 2791 PVFEADPYKAFLMENMPVGTTVIQVTANDQDTGSDGQVTYSLAAESDWVGELFAIDRESG 2850
Query: 154 DIRTNKALDYEKQQLY 169
I T K LD E ++ Y
Sbjct: 2851 WITTRKELDCEARETY 2866
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 67/165 (40%), Gaps = 24/165 (14%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQ--- 73
L+ G +A D G ++QV A D D+G V Y L + A F LDP T
Sbjct: 3010 LYTGRVAEDVPP-GHFILQVSAVDADAGVNAQVTYSL---HGPGADEFRLDPYTGELFTL 3065
Query: 74 --------------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
D GG S A V + V D+ND P F V +
Sbjct: 3066 TALDREEKDRYHLVAKATDGGGRSCQADVILGVDDVNDNAPRFTISHCSVVVFDNTTVKT 3125
Query: 119 AVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKAL 161
V V A D DEG NA V YS+ D F V+A TG IR KAL
Sbjct: 3126 PVAVVSARDPDEGPNAQVTYSLTNSADGRFSVEATTGVIRLEKAL 3170
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 75/186 (40%), Gaps = 35/186 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + +G T++QV A D+D+G G V Y L + F +D
Sbjct: 2798 YKAFLMENMPVGTTVIQVTANDQDTGSDGQVTYSLAAESDWVGELFAIDRESGWITTRKE 2857
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
A++H IQ LSS A V + V+D ND P F S Y SV E
Sbjct: 2858 LDCEARETYQFHVVASDHGRTIQ----LSSQALVEVTVSDENDNAPRFTSEVYRGSVIEN 2913
Query: 115 QD-GLAVGRVHATDAD-EGQNAVVYYSVPEDIPF----VVDAN-TGDIRTNKALDYEKQQ 167
+ G + + DAD QN V + E P ++ A+ I + K LD E +
Sbjct: 2914 SEPGQLIATLRTLDADISEQNRQVACYITEGDPLGQFDIIQADENWKISSKKPLDREDIE 2973
Query: 168 LYLERV 173
Y RV
Sbjct: 2974 KYFLRV 2979
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 74/181 (40%), Gaps = 24/181 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFN--- 65
Y A + G +++V+A D DSG+ +EY +L N D S FN
Sbjct: 2379 YEANVSELATCGHLVLKVQALDPDSGETTRLEYLILSGNEDRHFTINSSSGIISMFNLCR 2438
Query: 66 --LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGR 122
LDPA + D G ST V I T+ N +P F YE + E G V
Sbjct: 2439 RHLDPAYRLRVAASD-GVFRSTVPVYINTTNANKYSPAFDQHVYEAELAENAMAGTKVIE 2497
Query: 123 VHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERVFLISKF 179
+ A D D+G V Y + + F VDA G I T + LD E ERV I
Sbjct: 2498 LLAVDPDDGPYGTVDYIIINKLASEKFAVDAK-GRITTLQELDRENST---ERVIAIKIM 2553
Query: 180 A 180
A
Sbjct: 2554 A 2554
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 23/146 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD-------------- 78
++++ A D+DSG+ G V Y+++++ +DA+ +F +D T ++
Sbjct: 2286 VIRLLAADRDSGRNGAVSYQIVEDGSDASEFFQVDGRTGQMATARELDYELRRQFRVKVS 2345
Query: 79 -----EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQ 132
E LSS A V ++V D+ND PEF+ YE +V E G V +V A D D G+
Sbjct: 2346 AADDGEPALSSEALVVVQVVDVNDNPPEFRQPQYEANVSELATCGHLVLKVQALDPDSGE 2405
Query: 133 NAVVYY---SVPEDIPFVVDANTGDI 155
+ Y S ED F +++++G I
Sbjct: 2406 TTRLEYLILSGNEDRHFTINSSSGII 2431
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVY 137
+G ++ V + V DIND +P+ + + Y V E G + +V A DAD G NA V
Sbjct: 2983 DGKFQASTQVEVFVLDINDNSPKCRQILYTGRVAEDVPPGHFILQVSAVDADAGVNAQVT 3042
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
YS+ P F +D TG++ T ALD E++ Y
Sbjct: 3043 YSLHGPGADEFRLDPYTGELFTLTALDREEKDRY 3076
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 72/174 (41%), Gaps = 31/174 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDN--------------------NTDAASYFNLD-P 68
G ++ ++A D D+G G V+Y L+DN N + + +NL
Sbjct: 936 GTLVLFLEAFDPDAGPGGEVKYALVDNAQGTFQVDKWTGAVTLERELNFETRALYNLTVE 995
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDK--NPEFQSLPYEFSVPEGQ-DGLAVGRVHA 125
A++ P+ SST V + V D+N+ P F S SV E G V A
Sbjct: 996 ASDGGKPLSR----SSTCYVEVSVLDVNENLHPPHFASFVSRGSVQENSPRGTLVMTAAA 1051
Query: 126 TDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
D D G++ + Y + E F +D TG IRT LD E+ Y V +
Sbjct: 1052 QDPDPGRDGELQYFLREGTGLATFSIDHETGTIRTVGPLDRERTPHYWLTVLAV 1105
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 67/162 (41%), Gaps = 28/162 (17%)
Query: 29 LGVTLMQVKATDK---------DSGKFGLVEYRLLDNNTDAASYFN--LDPATEHQGPIQ 77
L ++L+ + T+K D GKF L N+ + Y N LD H+ +
Sbjct: 3233 LQLSLLTREGTEKSGYRIVGGNDHGKFRL-------NSRTGSLYVNGSLDFEVSHEHYLS 3285
Query: 78 DE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE 130
E LS TV I VTD+ND P+F Y + E G + + A D D
Sbjct: 3286 IECSRKGASSLSDVMTVVINVTDVNDHEPKFTQELYSTDIREDAAVGETILTLTAVDEDG 3345
Query: 131 GQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
N+ V YS+ P F + G+I + LD+E+ Y
Sbjct: 3346 PMNSNVTYSLVGGDPQGHFAIHPKRGEIHVARPLDWEETPSY 3387
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 69/162 (42%), Gaps = 26/162 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE----------HQGPIQDE 79
GV +++V ATDKD GK GL+ + + F LDP + GP Q
Sbjct: 1458 GVEIIRVSATDKDKGK-GLIYTLHGSADPRSTRLFQLDPGSGTLVTVGKLDLDSGPSQHI 1516
Query: 80 GGL----------SSTATVNIRVTDINDKNPEFQSLPYEF-SVPEGQDGLAVGRVHATDA 128
+ + V IRV D N P F SL YE ++ G V +V A
Sbjct: 1517 LTIMVRDQEVPIKRNFVWVTIRVEDSNAHPPHFASLHYEATTLDSAAPGTEVLQVRALVE 1576
Query: 129 DEG-QNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQ 166
D G +A V+YS+ ++ F +D +G I + L+ KQ
Sbjct: 1577 DHGVSSAQVHYSIQAGNDESFFSIDQLSGVITVARKLNQSKQ 1618
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L ++ V I++ D ND P F Y ++P+ + V ATDAD GQNA YY+
Sbjct: 131 LEASTHVRIQILDRNDLKPLFSPPSYRVTIPDNTPPKRTICTVSATDADLGQNAGFYYAF 190
Query: 141 -PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKF 179
P F V +G + L + + RV + +
Sbjct: 191 NPRSELFAVHPTSGAVTVTGKLSAIHRGRHELRVLAVDRM 230
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--DEGGLSSTA 86
L +V+ DKD G F + Y L + + Y + T +Q I+ + G + A
Sbjct: 1682 LSAITYEVREGDKD-GVFAVNAYSGLISTRKSLDYEKI---TSYQLKIRGINMAGAFADA 1737
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEG--QDGLAVGRVH------ATDADEGQNAVVYY 138
V I V D ND P F + + E + L +G H ATDAD+ NA++ Y
Sbjct: 1738 AVLIYVIDENDHAPAFTQPTFVGYISEAAPEHSLVMGPEHSPLVVRATDADQDANALLVY 1797
Query: 139 SV--PEDIP-FVVDANTGDIRTNKALDYEK 165
+ PE + F +D + G + +DYE+
Sbjct: 1798 EIREPEALKYFAIDESMGTLTMVAEVDYEQ 1827
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 63/160 (39%), Gaps = 20/160 (12%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLL-----------------DNNTDAASYFNLDPATEH 72
G T+M+++A D D G V Y LL + D S+ E
Sbjct: 831 GTTVMRLRADDADKEDNGKVRYALLTPSDKFSVHAVTGELVVTGSLDRESWPRYVLTVEA 890
Query: 73 QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEG 131
+ + L S V + + D+ND +P VPE G V + A D D G
Sbjct: 891 RDQPTVDPQLFSVTDVVVTLEDVNDNSPRCIPQLNRLKVPEDAPPGTLVLFLEAFDPDAG 950
Query: 132 QNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
V Y++ ++ F VD TG + + L++E + LY
Sbjct: 951 PGGEVKYALVDNAQGTFQVDKWTGAVTLERELNFETRALY 990
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 77/192 (40%), Gaps = 34/192 (17%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSG-KFGLVEYRLLDNNTDAASYFNLDP------ 68
SL Y A D G ++QV+A +D G V Y + N + S+F++D
Sbjct: 1551 SLHYEATTLDSAAPGTEVLQVRALVEDHGVSSAQVHYSIQAGNDE--SFFSIDQLSGVIT 1608
Query: 69 -ATEHQGPIQDEGGLSSTAT------------VNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
A + QD L+ AT VNI + + P F Y + E
Sbjct: 1609 VARKLNQSKQDGFSLTVQATDGSAPQLQDSTVVNIHIAPSDHTPPRFSKEEYFVEIRESA 1668
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEK---QQL 168
G + V AT + + Y V E D F V+A +G I T K+LDYEK QL
Sbjct: 1669 AIGSPLTLVSATSL-----SAITYEVREGDKDGVFAVNAYSGLISTRKSLDYEKITSYQL 1723
Query: 169 YLERVFLISKFA 180
+ + + FA
Sbjct: 1724 KIRGINMAGAFA 1735
Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 24/134 (17%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGL-VEYRLLDNNTDAASYFNLD-------- 67
L Y + ++ LG +++++ +D+DS + G +R+ + N A D
Sbjct: 3424 LNYSIVVQESAPLGTSVLELTVSDRDSPENGPPYSFRIAERNDGLAFRITQDGVLMTAAV 3483
Query: 68 ---PATEH---QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSV----PEGQ 115
A E Q + D G L S+A V+I+VT+ + P +LP E + PE Q
Sbjct: 3484 LRRAAKEQYLLQVQVSDSGDPPLWSSAYVHIQVTERSRYPP--TALPLEIFIATGEPEFQ 3541
Query: 116 DGLAVGRVHATDAD 129
G+ VG++HATD D
Sbjct: 3542 GGV-VGKIHATDQD 3554
>gi|395510863|ref|XP_003759687.1| PREDICTED: cadherin-18-like [Sarcophilus harrisii]
Length = 790
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI ++D+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLSDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + Y++ I + G + K L+YEK++ Y
Sbjct: 289 KIKANDADTGTNAEMKYTIINGDGIGVFSISTDKETREGILSLKKPLNYEKKKSY 343
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 353 HLDFRFSHLGPFKD------VTMLKIIVGDV-DEPPLFSMPSYVMDVHENEKIGTVVGTV 405
Query: 124 HATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D + V Y YS +D F +DANTG I+T K LD E+ Y
Sbjct: 406 AAQDPDSANSLVRYFIDYSSEDDRYFNIDANTGTIKTAKVLDREETPWY 454
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 57/137 (41%), Gaps = 26/137 (18%)
Query: 25 DKHE---LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------E 71
D HE +G + V A D DS LV Y +D +++ YFN+D T
Sbjct: 391 DVHENEKIGTVVGTVAAQDPDSAN-SLVRY-FIDYSSEDDRYFNIDANTGTIKTAKVLDR 448
Query: 72 HQGPI---------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
+ P +D L S V IRV D+ND PE Y+ V E + G +
Sbjct: 449 EETPWYNITVAASEKDNPSLLSHVVVGIRVLDVNDNPPELAK-EYDIVVCENSKPGQVIH 507
Query: 122 RVHATDADEGQNAVVYY 138
+ ATD D+ N ++
Sbjct: 508 TISATDKDDFANGPRFH 524
Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYVL 126
Query: 172 RVFLISKFATSYL 184
I ++ L
Sbjct: 127 HAQAIDRWTNKPL 139
>gi|348514391|ref|XP_003444724.1| PREDICTED: protocadherin gamma-A11-like [Oreochromis niloticus]
Length = 684
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 21/173 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------- 64
Y A R+ +G T+M+V ATD D G G + Y + A F
Sbjct: 236 IYKASIRENSAVGTTVMRVTATDADHGSNGRITYSISSILDSARGLFEVNGENGEIRLKG 295
Query: 65 NLD--PATEHQGPIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLA 119
N+D A Q I+ D+GGL + V I V D+ND P+ + + E + G
Sbjct: 296 NIDYEKARTFQINIRASDDGGLVDSCKVKIDVIDMNDNKPDIHIMSKSNVITEDAKPGTT 355
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
V +HA DAD G+N V ++ E+IPFV+ + T D + T LD E Y
Sbjct: 356 VTMIHAKDADSGENGKVQCTMNENIPFVMKSTTSDFYSLMTESDLDRESASEY 408
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 26/170 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDN-----NTDAASYFNL--------DPATEHQGPI 76
G T+ + A D DSG+ G V+ + +N + + +++L + A+E+ +
Sbjct: 353 GTTVTMIHAKDADSGENGKVQCTMNENIPFVMKSTTSDFYSLMTESDLDRESASEYNITV 412
Query: 77 --QDEG--GLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEG 131
DEG LSS+ T+ ++++D+ND P F Q F G+++ V A+D D G
Sbjct: 413 ICSDEGVPSLSSSVTLTLQISDVNDNAPVFEQQFLTAFVNENNSPGMSLLTVKASDMDYG 472
Query: 132 QNAVVYY--------SVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA + Y + F V+ G+I ++ DYE+ + + RV
Sbjct: 473 SNARISYFLEDSQLNGMSASAYFSVNVERGEIVAVRSFDYEQTKEFHIRV 522
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY 137
E ++ T + I V D ND P F Y+ S+ E G V RV ATDAD G N +
Sbjct: 209 EPQMTGTMQILITVLDANDNAPVFTQPIYKASIRENSAVGTTVMRVTATDADHGSNGRIT 268
Query: 138 YSVPEDIP-----FVVDANTGDIRTNKALDYEKQQLY 169
YS+ + F V+ G+IR +DYEK + +
Sbjct: 269 YSISSILDSARGLFEVNGENGEIRLKGNIDYEKARTF 305
>gi|449499705|ref|XP_004186240.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Taeniopygia
guttata]
Length = 5033
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 76/161 (47%), Gaps = 23/161 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G ++Q+ A D D G LV Y ++ D+ F++DP + E +
Sbjct: 1802 GSKILQLTAMDADEGANALVTYTIISGADDS---FHIDPESGELIATKRLDRERRSKYSL 1858
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQ 132
D+G SS +NI V+D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1859 LVRADDGLQSSDVRINITVSDVNDHIPKFSKPVYSFDIPEDATPGSLVAAILATDDDSGI 1918
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYL 170
N + Y++ ED F ++ TG +ALDYE QQ Y+
Sbjct: 1919 NGEITYTISEDDEEGIFFLNPVTGVFNLTRALDYEAQQYYI 1959
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 79/167 (47%), Gaps = 24/167 (14%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY----------------FNLDP 68
+ + +G + V A D+D+ GL+ Y + N +A + F LD
Sbjct: 3148 ESYSVGTVVRTVSARDRDAAMNGLIRYNISSGN-EAGIFAINTTTGTLTLAKPLDFELDQ 3206
Query: 69 ATEHQGPIQDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHA 125
E D G +S T +V + V D+ND +P F Y +V E G V ++A
Sbjct: 3207 KHELVVTATDGGWVSRTGYCSVTVNVIDVNDNSPAFSPEEYFPTVLENAPSGTTVICLNA 3266
Query: 126 TDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
TDAD G NAV+ Y++ D+ FV+D NTG I T LDYE +Q Y
Sbjct: 3267 TDADSGSNAVIAYAIQSSDSDL-FVIDPNTGTITTQGFLDYETKQSY 3312
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 80/162 (49%), Gaps = 24/162 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V A D+DSG G + Y +++ NT+ + F+++ AT I+
Sbjct: 2735 ILTVAAVDRDSGLNGQLNYEIIEGNTENS--FSINRATGEIRSIRPLDREKLSQYTLTIK 2792
Query: 78 -DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
+ G+ S+T V I V D ND P F + + SVPE G V RV +D D G
Sbjct: 2793 ASDKGIPLQSTTVKVIINVLDENDNAPRFSQI-FSASVPENAPLGFTVARVTTSDEDIGV 2851
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NAV YS+ + +PF ++ +TGDI ++ L+ E Y RV
Sbjct: 2852 NAVSRYSIRDTSLPFTINPSTGDITISRPLNREDTDRYRIRV 2893
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 75/179 (41%), Gaps = 39/179 (21%)
Query: 30 GVTLMQVKATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP---IQDEGGLSS 84
G L+ ATD DSG G+ YR++ N + N+ +G + GGL
Sbjct: 147 GRQLILDTATDADSGTNGVDHGSYRIVAGNEEGRFRLNITLNPSGEGAFLHLVSRGGLDR 206
Query: 85 TAT----------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
AT VN+ + DIND P F Y+ VPE G +V
Sbjct: 207 EATPTYQLLVQVEDKGEPRRRGYLQVNVTIQDINDNPPIFSQTLYQARVPEDAPVGASVL 266
Query: 122 RVHATDADEGQNAVVYYSV-----------PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V A DADEG NA + Y + +PF VD +G IR + LDYE +Q Y
Sbjct: 267 QVTAADADEGTNADIRYRLEGGDGSGAGDGAGSLPFEVDPESGVIRIRERLDYEVRQQY 325
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 22/167 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y + D + F ++P+T
Sbjct: 2822 SQIFSASVPENAPLGFTVARVTTSDEDIGVNAVSRYSIRDTSLP----FTINPSTGDITI 2877
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
P+ E G + + V I V+D+ND P F Y PE GL
Sbjct: 2878 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVSDVNDNAPRFTKPSYYLECPELPGIGL 2937
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYE 164
V +V ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 2938 KVTQVSATDPDEGSNGQVFYFIKSQSEFFRINATTGEIFNKQYLRYQ 2984
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 86/188 (45%), Gaps = 23/188 (12%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF---NLDPAT 70
D L Y + + +V+A+DKDSG G + Y +++ N DA F L +
Sbjct: 1043 DQLSYEITILESEPVNSRFFKVQASDKDSGVNGEIAYSIIEGNAGDAFGIFPDGQLYIKS 1102
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
E +Q+ L++T V + + D+ND P F S Y F E Q G
Sbjct: 1103 ELDRELQERYVLLVVASDRAVEPLNATVNVTVILEDVNDNRPLFNSTNYVFYFEEEQRGG 1162
Query: 119 A-VGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLER---V 173
+ VG+++A D D G N V YS P F ++ TG+IR+ D ++ L +R V
Sbjct: 1163 SYVGKINAVDKDFGPNGEVRYSFEHMQPDFELNTVTGEIRSTHQFD--REALMRQRGAAV 1220
Query: 174 FLISKFAT 181
F ++ AT
Sbjct: 1221 FSLTVIAT 1228
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 75/160 (46%), Gaps = 25/160 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQGPIQ 77
+++V A+D D G GL++Y ++ N + + F +D +T + IQ
Sbjct: 1275 VLRVSASDVDEGVNGLIQYSVIKGNEE--NQFVIDTSTGQVTLVGRLDYEATASYSLVIQ 1332
Query: 78 --DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D G LSST ++I V D ND +P F V E G V V ATD+D G
Sbjct: 1333 AVDSGAVSLSSTCMLSIDVLDENDNSPSFPKSTLLVDVLENMRVGELVSSVTATDSDSGD 1392
Query: 133 NAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
NA ++YS+ F + NTG I K LD+E Q LY
Sbjct: 1393 NADLHYSITGTNNHGTFSISPNTGSIFLAKKLDFETQYLY 1432
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 68/157 (43%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEG------------ 80
+ + +ATD DSG +EY LL + S +D G + E
Sbjct: 2115 VFKAQATDPDSGPNSYIEYSLLPPPGNKFSIGTIDGEVRLTGELDREAVANYTLTVVATD 2174
Query: 81 ----GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
LSS+ V + V DIND NP F Y+ V E G + +V A D DEG N
Sbjct: 2175 KGQPSLSSSTDVVVIVLDINDNNPLFAQKLYKVEVAENTLTGTDLIQVLAADGDEGTNGQ 2234
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y++ + F +D+ TG I K LD EK+ Y
Sbjct: 2235 VRYAIVSGDANSEFRIDSVTGVITVAKPLDREKKPSY 2271
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 60/117 (51%), Gaps = 13/117 (11%)
Query: 60 AASYFNLDPATEHQG---PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
A+ F+L QG P++D+ ATV I + DIND P+F Y+ ++ E
Sbjct: 1217 GAAVFSLTVIATDQGLPKPLKDQ------ATVQIYMKDINDNAPKFLKDLYQATISELAA 1270
Query: 117 GLA-VGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
L V RV A+D DEG N ++ YSV E+ FV+D +TG + LDYE Y
Sbjct: 1271 NLTQVLRVSASDVDEGVNGLIQYSVIKGNEENQFVIDTSTGQVTLVGRLDYEATASY 1327
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 73/164 (44%), Gaps = 32/164 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3258 GTTVICLNATDADSGSNAVIAYAIQSSDSD---LFVIDPNT---GTITTQGFLDYETKQS 3311
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHAT 126
S ATVNI++ N+ P F S Y F V E G VG V A+
Sbjct: 3312 YHLTVKAFNVPDEERCSFATVNIQLEGTNEYVPRFVSKLYYFEVSEAASKGTVVGEVFAS 3371
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQ 167
D D G + V+Y + F +D +G I + LD EK++
Sbjct: 3372 DRDMGIDGEVHYLIFGNSRKKGFQIDEKSGQIYVSGPLDREKEE 3415
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 27/165 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGP---- 75
G L+QV A D D G G V Y ++ DA S F +D P + P
Sbjct: 2216 GTDLIQVLAADGDEGTNGQVRYAIVSG--DANSEFRIDSVTGVITVAKPLDREKKPSYTL 2273
Query: 76 -IQDEGGLSS----TATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDA 128
+Q SS T TV+I + D+ND P F+ PY +VPE + L + +V A D
Sbjct: 2274 TVQSSDRGSSPRTDTTTVSIVLKDVNDFIPTFELSPYSVNVPENLETLPKVILQVVARDD 2333
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D+G N+ + Y + E+ F + + +G++R ++LD E ++ YL
Sbjct: 2334 DQGLNSKLTYMLVAGNEEGAFTL-SGSGELRLVQSLDREAKEQYL 2377
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 70/172 (40%), Gaps = 32/172 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLD----------NNTDAASYFNLDPATEHQGPIQ-- 77
G L+ + ATD D G G V + L + + F LDP + I
Sbjct: 634 GTELLVLSATDGDLGDNGTVRFSLQEAEPALVAVGPSPVTPRQMFRLDPVSGKLSTISQL 693
Query: 78 ---------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
D G LSS A VN+ + D+ND +P F + Y + E + G
Sbjct: 694 DREEQSHFSLQVLATDLGSPPLSSVARVNVTILDVNDNSPVFYPVQYFAHIQENEPAGTY 753
Query: 120 VGRVHATDADEGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V + ATD D G N V YS+ + F V TG I T ALD E++ Y
Sbjct: 754 VTTLSATDPDLGPNGTVKYSISAGDTSRFQVHGQTGVITTKIALDREEKTAY 805
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 65/166 (39%), Gaps = 32/166 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGG-------- 81
G T+ Q KA D D G G+V Y L N S A GP+ G
Sbjct: 955 GHTIFQAKALDPDEGVNGVVLYSLKQNPKGLFSINEQTGAISLTGPLDINAGSYQVEILA 1014
Query: 82 -------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
LSS + + V D+ND P F L YE ++ E + +V A+D D G N
Sbjct: 1015 SDMGVPQLSSAFILTVSVHDVNDNPPVFDQLSYEITILESEPVNSRFFKVQASDKDSGVN 1074
Query: 134 AVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYL 170
+ YS +++ N GD + LD E Q+ Y+
Sbjct: 1075 GEIAYS-------IIEGNAGDAFGIFPDGQLYIKSELDRELQERYV 1113
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1770 AEVEITLQDINDNPPVFPTDMLDLTVEENIGDGSKILQLTAMDADEGANALVTYTIISGA 1829
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +G++ K LD E++ Y
Sbjct: 1830 DDSFHIDPESGELIATKRLDRERRSKY 1856
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 18/155 (11%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI----QD 78
++QV A D D G + Y L+ N + A + LD + Q + D
Sbjct: 2325 ILQVVARDDDQGLNSKLTYMLVAGNEEGAFTLSGSGELRLVQSLDREAKEQYLLLVTAAD 2384
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAV 135
G L+ T T+ + V D+ND P F Y +VPE G + V+++DAD NAV
Sbjct: 2385 TGSPALTGTGTIAVTVDDVNDNVPTFAFNMYFATVPEDAPTGTDILLVNSSDADASTNAV 2444
Query: 136 VYYSV-PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ Y + + F ++ +TG I T+ LD E ++ Y
Sbjct: 2445 ISYRLMGGNSQFTINPSTGQIITSALLDREARENY 2479
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRL----------LDNNTDAAS-----YFNLDPATE 71
+G L++V A D KD G VEY + LD NT S +L+
Sbjct: 3045 RVGTNLIKVTAVDDKDFGLNSEVEYFIADESKTNKFRLDRNTGWISVSSSLMADLNKNFL 3104
Query: 72 HQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+ +D+G LSS A V I VT+ N PEF ++PE G V V A D
Sbjct: 3105 FKVKAKDKGNPPLSSEAAVEIVVTEENYHTPEFSQSRMSVTIPESYSVGTVVRTVSARDR 3164
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
D N ++ Y++ E F ++ TG + K LD+E Q +
Sbjct: 3165 DAAMNGLIRYNISSGNEAGIFAINTTTGTLTLAKPLDFELDQKH 3208
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
SS + I V D+ND PEF+ P+ + E + V A D D G N + Y +
Sbjct: 2697 FSSYKKLEISVIDVNDNVPEFERDPFIAEIAENLSPRKILTVAAVDRDSGLNGQLNYEII 2756
Query: 142 E---DIPFVVDANTGDIRTNKALDYEKQQLY 169
E + F ++ TG+IR+ + LD EK Y
Sbjct: 2757 EGNTENSFSINRATGEIRSIRPLDREKLSQY 2787
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 68/175 (38%), Gaps = 33/175 (18%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
Y A + G ++ V ++D D+ ++ YRL+ N S F ++P+T G I
Sbjct: 2414 MYFATVPEDAPTGTDILLVNSSDADASTNAVISYRLMGGN----SQFTINPST---GQII 2466
Query: 78 DEGGLSSTATVNIRVT-----------------------DINDKNPEFQSLPYEFSVPE- 113
L A N + D+ND P+FQ PY VP
Sbjct: 2467 TSALLDREARENYTLVVVASDGGFPTALSSSTSVLVSVDDVNDNPPKFQHHPYVTHVPSP 2526
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQ 166
G V V TDAD G NA ++YS+ F +D G I K L E +
Sbjct: 2527 TTSGSFVFAVTVTDADAGSNAELHYSLVGKNSEKFHIDPARGAILAAKPLVGESE 2581
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 80 GGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
G ++ A VNI V D+ND +P F Q + V + G + + A D DEG N VV Y
Sbjct: 917 GAITGDAVVNITVKDLNDNSPHFIQVVESVNVVENWKAGHTIFQAKALDPDEGVNGVVLY 976
Query: 139 SVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
S+ ++ F ++ TG I LD +E
Sbjct: 977 SLKQNPKGLFSINEQTGAISLTGPLDINAGSYQVE 1011
Score = 42.7 bits (99), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 20/159 (12%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY-------FNLDPATEHQGP------- 75
G + + ATD DSG G + Y + +++ + + FNL A +++
Sbjct: 1903 GSLVAAILATDDDSGINGEITYTISEDDEEGIFFLNPVTGVFNLTRALDYEAQQYYILTV 1962
Query: 76 -IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQN 133
+D GG + V + D+ND P F S+ E G A+ TDAD+G N
Sbjct: 1963 RAEDGGGQFTAIRVYFNILDVNDNPPVFGMASCSTSLMENLPPGSAILNFTVTDADDGPN 2022
Query: 134 AVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ + +S+ F +D N G + K LD E Q Y
Sbjct: 2023 SQLSFSIASGDSAGQFGID-NRGVLSIRKPLDRESQSFY 2060
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 70/164 (42%), Gaps = 32/164 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G + V TD D+G + Y L+ N++ F++DPA +G I
Sbjct: 2530 GSFVFAVTVTDADAGSNAELHYSLVGKNSEK---FHIDPA---RGAILAAKPLVGESEVT 2583
Query: 77 -----QDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D G T TV +R D + P Q+ F+ PE Q G V V + A
Sbjct: 2584 LSVHVRDSGRYPKTDSTTVTVRFVD-KAEFPRVQAEQETFTFPENQAVGTLVTTVSGSSA 2642
Query: 129 DEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYL 170
G ++ YY ++ F+VD TG + +ALD+E Q Y+
Sbjct: 2643 RGG--SLSYYIASGNLGSTFLVDQVTGQLSVGRALDFESVQKYV 2684
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 9/148 (6%)
Query: 38 ATDKDSGKFGLVEYRLLDN----NTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVT 93
A+ +G+FG+ +L + ++ S+++L P+ +STA V+I +
Sbjct: 2030 ASGDSAGQFGIDNRGVLSIRKPLDRESQSFYSLVVQVHDMAPLP-ASRYTSTAQVSIILL 2088
Query: 94 DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDA 150
D+ND P F S P VPE V + ATD D G N+ + YS+ P F +
Sbjct: 2089 DVNDSPPSFIS-PKLTYVPENTPIDTVVFKAQATDPDSGPNSYIEYSLLPPPGNKFSIGT 2147
Query: 151 NTGDIRTNKALDYEKQQLYLERVFLISK 178
G++R LD E Y V K
Sbjct: 2148 IDGEVRLTGELDREAVANYTLTVVATDK 2175
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 68/174 (39%), Gaps = 36/174 (20%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------- 70
+ +G + V ATD DSG + Y + N F++ P T
Sbjct: 1372 ENMRVGELVSSVTATDSDSGDNADLHYSITGTNNHGT--FSISPNTGSIFLAKKLDFETQ 1429
Query: 71 ---------EHQG-PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
+ QG P+Q SST +V I V D ND P F S+ E G +
Sbjct: 1430 YLYKLNITAKDQGRPLQ-----SSTMSVVIHVRDFNDNPPHFPPGDIFKSIVENVPVGSS 1484
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
V V A D D N + Y++ + +P F +D G I TN +D E L+
Sbjct: 1485 VISVTAHDPDADINGQLTYAIIQQMPRGNHFRIDEVRGTIFTNAEIDREFANLF 1538
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 67/174 (38%), Gaps = 20/174 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + + ATD D G G V+Y + +T + LD
Sbjct: 740 YFAHIQENEPAGTYVTTLSATDPDLGPNGTVKYSISAGDTSRFQVHGQTGVITTKIALDR 799
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V I V D D P F Y F V E G VG
Sbjct: 800 EEKTAYQLQIVATDGGHLQSQNQAIVTITVLDTQDNPPVFSQGTYSFVVFENVALGYHVG 859
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A+ D N + Y D F ++ TG I T +D E+Q Y +V
Sbjct: 860 TVFASTMDLNTN-ISYLITTGDQRGVFAINRVTGQITTASIIDREEQAFYQLKV 912
Score = 36.2 bits (82), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD ND P F S + P G + + A D DEG N V Y + +
Sbjct: 1561 VTILVTDQNDNVPVFVSQNALAADPSVVIGSILTTIIAADPDEGANGEVEYEIVNGDTET 1620
Query: 146 FVVDANTGDIRTNKAL 161
F+VD +GD+R AL
Sbjct: 1621 FIVDRYSGDLRVASAL 1636
>gi|391333242|ref|XP_003741028.1| PREDICTED: protocadherin-like wing polarity protein stan-like
[Metaseiulus occidentalis]
Length = 2673
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 28/174 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
+Y A R+ +G T++ +ATD D+G+ ++ Y L DA F +D +
Sbjct: 256 YYEASIRESSPVGSTILTARATDSDAGQNAVISYS-LQVGFDATDIFAIDATSGVIYTKA 314
Query: 71 --------EHQGPIQDEGG------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
E+ I+ E G L+STA +++ + D ND P+F Y VPE
Sbjct: 315 SLDREKIPEYSIIIRAEDGAPVQKRLTSTAQLHLVIQDDNDNYPQFSERTYSVEVPENIS 374
Query: 117 GL---AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
+ + R+ ATDADE +NA + YS+ F +D TG IR LDYE
Sbjct: 375 WIDKPEITRIEATDADENENAALRYSIIGGNTQGHFSIDPLTGSIRAVSPLDYE 428
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 31/173 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQGP 75
+ +++ATD D + + Y ++ NT +F++DP T
Sbjct: 381 ITRIEATDADENENAALRYSIIGGNTQG--HFSIDPLTGSIRAVSPLDYETLTNYRLVAR 438
Query: 76 IQDEGGLSSTATVNI--RVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQ 132
+QD G S + T N+ V DIND +P F + + SV E + G +V +V A D D +
Sbjct: 439 VQDGGSPSRSNTTNVLVNVLDINDNDPRFYATEFHESVSENVEKGHSVIQVQAFDTDAAE 498
Query: 133 NAVVYYSV-------PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
NA + YS+ + +P ++ +TG IR LD+E + Y + F+I++
Sbjct: 499 NAKITYSLLTVDGSDSDTLPVYIEPDTGYIRIRTLLDHENRTDY--KFFVIAR 549
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 72/165 (43%), Gaps = 27/165 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP----------------ATEH 72
LG +++QV A D+D G V Y + D F++DP AT H
Sbjct: 797 LGTSIVQVSALDEDQGLNAQVRYTFTGGD-DGQGAFSIDPTSGLVRTAKQLDREAVATYH 855
Query: 73 QGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+ + G +S+T + + V DIND P F S + VPE G +G + A D
Sbjct: 856 LKAVAVDRGSPQMSTTVPITVFVEDINDSPPRFDSDRIQIFVPENVPLGSVIGTIEAKDP 915
Query: 129 DEGQNAVVYYSV-----PEDIPFVVDANTG-DIRTNKALDYEKQQ 167
DEG NAVV Y++ E + A+ DI + DYE +
Sbjct: 916 DEGPNAVVTYTIVGGPDAESFSLITKASGPVDIVSRLEFDYESSK 960
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 76/178 (42%), Gaps = 34/178 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-- 76
Y A + +G T++ ++A D D G V Y L DA + F ++P T G I
Sbjct: 684 YTASVFEDIPVGTTVLVIEAIDNDVGDNARVTYTL----EDAVNAFKIEPTT---GAIVT 736
Query: 77 ------------------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
QD+G LS + +V I V D+ND P+F Y V E
Sbjct: 737 SLPLDRESVSGYTLVITAQDDGRPPLSDSTSVEIEVIDVNDNAPKFAMASYTSDVSEDAL 796
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G ++ +V A D D+G NA V Y+ F +D +G +RT K LD E Y
Sbjct: 797 LGTSIVQVSALDEDQGLNAQVRYTFTGGDDGQGAFSIDPTSGLVRTAKQLDREAVATY 854
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
++ T T+ + V D ND P F+ YE S+ E G + ATD+D GQNAV+ YS+
Sbjct: 232 VTGTTTLQVSVLDENDHAPHFEQGYYEASIRESSPVGSTILTARATDSDAGQNAVISYSL 291
Query: 141 -----PEDIPFVVDANTGDIRTNKALDYEK 165
DI F +DA +G I T +LD EK
Sbjct: 292 QVGFDATDI-FAIDATSGVIYTKASLDREK 320
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVV 136
D GG + TAT+ I VTD N+ P F PY SV E G V + A D D G NA V
Sbjct: 655 DYGGRTDTATLYINVTDANNHRPTFVKTPYTASVFEDIPVGTTVLVIEAIDNDVGDNARV 714
Query: 137 YYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLY 169
Y++ + + F ++ TG I T+ LD E Y
Sbjct: 715 TYTLEDAVNAFKIEPTTGAIVTSLPLDRESVSGY 748
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 34/183 (18%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDA----------ASYFNLDPATEHQGPI 76
E G +++QV+A D D+ + + Y LL + +D+ Y + +H+
Sbjct: 481 EKGHSVIQVQAFDTDAAENAKITYSLLTVDGSDSDTLPVYIEPDTGYIRIRTLLDHENRT 540
Query: 77 --------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHA 125
+D G S+TATV ++V D+ND +P F+ Y ++ E G V VHA
Sbjct: 541 DYKFFVIARDNGKPQRSATATVVLQVQDVNDNDPTFEQKSYYATLSEKDPPGTPVITVHA 600
Query: 126 TDADEGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
+D D +++ + YS+P + + G + + LD++ LE F ++ A
Sbjct: 601 SDPD--KDSRIQYSIPSGNHRDRFGIISQNGNGIVSIAQPLDFK-----LENRFALTIQA 653
Query: 181 TSY 183
+ Y
Sbjct: 654 SDY 656
>gi|242004578|ref|XP_002423159.1| class D atypical G-protein coupled receptor GPRstn1, putative
[Pediculus humanus corporis]
gi|212506116|gb|EEB10421.1| class D atypical G-protein coupled receptor GPRstn1, putative
[Pediculus humanus corporis]
Length = 3235
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 81/181 (44%), Gaps = 37/181 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y A R+ +G ++ V+ATD+D K + Y D + + FN+D T G +
Sbjct: 456 YEAAVREGVAIGTIVITVRATDQDINKNAEIVYSFKDPDEE----FNIDGKT---GVVTT 508
Query: 79 EGGL------------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
L ++TA +N+RV D ND P+F Y SVPE
Sbjct: 509 RKALDREVTANYALTVIASDSPPVGERKTATALLNVRVLDDNDNYPQFTERTYTVSVPED 568
Query: 115 QDGL---AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQL 168
D + V ATDADEG+NA + Y + F++D+ TGD+ K LDYE +
Sbjct: 569 MDASLSPVIATVKATDADEGKNAAIRYVIIGGNTQAQFLIDSLTGDVILAKPLDYEVLKS 628
Query: 169 Y 169
Y
Sbjct: 629 Y 629
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 79/176 (44%), Gaps = 31/176 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGPI--------- 76
L + VKATD D GK + Y ++ NT A F +D T P+
Sbjct: 573 LSPVIATVKATDADEGKNAAIRYVIIGGNTQAQ--FLIDSLTGDVILAKPLDYEVLKSYR 630
Query: 77 -----QDEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
QD G S + T + V D+ND P F S ++ SV E G ++ +V A D+
Sbjct: 631 LVIRAQDGGNPSKSNTTQLLVNVKDVNDNEPRFYSTLFQESVLESVPVGYSIVKVQAYDS 690
Query: 129 DEGQNAVVYYSVPE---------DIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
DEG N + YS+ E ++P +D+ +G I+T K LD E Y +V +
Sbjct: 691 DEGANVALKYSLSERDEFGTPTNELPLTIDSVSGWIQTTKPLDREMTSKYQFQVIV 746
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 81/181 (44%), Gaps = 21/181 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--QGPI 76
Y A + +G T++ V+A+D D G+ + Y L + F+++P T +
Sbjct: 882 YTAQVFEDAPVGTTVLVVQASDGDVGQNAQITYSLTSGAEFSVDSFSINPQTGAVVTTKL 941
Query: 77 QDEGGLSS---TAT--------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
D +SS T T V I V D+ND +P F S Y + E G +V +V
Sbjct: 942 LDRETVSSYLLTVTARDGGKNYVEITVKDVNDNSPVFSSATYSGVISEDALVGTSVLQVQ 1001
Query: 125 ATDADEGQNAVVYY-------SVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
ATD D G N + Y S D FV+D G IRT+K LD E Y +V+ I
Sbjct: 1002 ATDIDSGLNGRIRYAFNPPGSSGAVDNSFVIDPTLGVIRTSKNLDRESVPFYSLKVYAID 1061
Query: 178 K 178
+
Sbjct: 1062 R 1062
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 71/152 (46%), Gaps = 29/152 (19%)
Query: 14 SDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA--SYFNLDPATE 71
S + + G ++ D +G +++QV+ATD DSG G + Y + A + F +DP
Sbjct: 979 SSATYSGVISEDAL-VGTSVLQVQATDIDSGLNGRIRYAFNPPGSSGAVDNSFVIDPTL- 1036
Query: 72 HQGPIQ--------------------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEF 109
G I+ D G L S VNI++ D+ND P F+S F
Sbjct: 1037 --GVIRTSKNLDRESVPFYSLKVYAIDRGTPSLYSVVNVNIKIEDVNDSPPVFESEKIVF 1094
Query: 110 SVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
+PE G VG V A D DEG NA++ YS+
Sbjct: 1095 YIPENSPIGSTVGEVRAKDPDEGVNAIIQYSI 1126
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG S ATV + VTD N+ +P F++ PY V E G V V A+D D GQNA +
Sbjct: 853 DTGGRSDIATVYVNVTDANNYSPVFENAPYTAQVFEDAPVGTTVLVVQASDGDVGQNAQI 912
Query: 137 YYSVPEDIPFVVDA-----NTGDIRTNKALDYEKQQLYLERV 173
YS+ F VD+ TG + T K LD E YL V
Sbjct: 913 TYSLTSGAEFSVDSFSINPQTGAVVTTKLLDRETVSSYLLTV 954
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVP 141
S T T+ I V D ND P F+S YE +V EG G V V ATD D +NA + YS
Sbjct: 432 SGTTTLQINVIDANDHAPVFESDSYEAAVREGVAIGTIVITVRATDQDINKNAEIVYSFK 491
Query: 142 E-DIPFVVDANTGDIRTNKALDYE 164
+ D F +D TG + T KALD E
Sbjct: 492 DPDEEFNIDGKTGVVTTRKALDRE 515
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 50/108 (46%), Gaps = 13/108 (12%)
Query: 76 IQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD--GLAVGRVHATDADE 130
I ++GG S+TA V I V D+ND +P F YE V E QD G V V ATD DE
Sbjct: 745 IVEDGGEPPKSATANVIINVQDVNDNDPVFNPKIYEVVVSE-QDPPGTLVASVTATDPDE 803
Query: 131 GQNAVVYYSVPE-----DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
N+ ++Y + N G + LDY + + Y+ V
Sbjct: 804 --NSRLHYEITNGNVRGRFSITSQNNRGLVAIAHPLDYRQDKRYILTV 849
>gi|224046028|ref|XP_002191433.1| PREDICTED: cadherin-19 [Taeniopygia guttata]
Length = 779
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 82/178 (46%), Gaps = 29/178 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------------- 70
G ++ QV ATD D +G RLL + + YF+++P T
Sbjct: 165 GTSVTQVTATDADDPSYG-NSARLLYSLLEGQPYFSVEPKTGVIRMASQMDRETKEQYLV 223
Query: 71 --EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATD 127
+ + + G LS+TATV I ++DIND PEFQ Y SV E G VG+V A D
Sbjct: 224 IIQAKDMVGQPGALSATATVTINLSDINDNPPEFQQRLYYMSVSEEAPVGTTVGKVFAED 283
Query: 128 ADEGQNAVVYYSVPEDIPFVVDANT------GDIRTNKALDYEKQQLYLERVFLISKF 179
D G N + Y + D V D T G I K +DYE Q+ Y +V ++++
Sbjct: 284 RDTGDNTAMDYFIEADSSGVFDIITNNETQEGIILLKKRVDYESQRRYSIQVKAVNRY 341
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V D+ND P+F PY +VPE +G +V +V ATDAD+ G +A + YS+ E P
Sbjct: 137 IKVRDVNDNEPQFLDGPYVATVPEMSPEGTSVTQVTATDADDPSYGNSARLLYSLLEGQP 196
Query: 146 -FVVDANTGDIRTNKALDYEKQQLYL 170
F V+ TG IR +D E ++ YL
Sbjct: 197 YFSVEPKTGVIRMASQMDRETKEQYL 222
>gi|431917279|gb|ELK16815.1| Cadherin-10 [Pteropus alecto]
Length = 810
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 84/186 (45%), Gaps = 31/186 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D +G R++ + YF+++P T
Sbjct: 164 IYTASVPEMSVVGTSVVQVTATDADDPSYG-NSARVIYSILQGQPYFSVEPETGIIRTAL 222
Query: 71 ---------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++Q IQ + GGLS T VNI +TD+ND P F V E
Sbjct: 223 PNMNRENREQYQVVIQAKDMGGQMGGLSGTTMVNITLTDVNDNPPRFPQNTIHLRVLESS 282
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQ 167
G A+G V A DAD G+NA V Y + + DI D G I K LDYE ++
Sbjct: 283 PVGTAIGSVKAIDADTGKNAEVEYRIIDGDGTDMFDIITEKDTQEGIITVKKPLDYESRR 342
Query: 168 LYLERV 173
LY +V
Sbjct: 343 LYTLKV 348
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKIHDINDNEPTFPEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F V+ TG IRT
Sbjct: 208 YFSVEPETGIIRT 220
>gi|395856533|ref|XP_003800682.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Otolemur garnettii]
Length = 4378
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 85/176 (48%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQ--GP 75
Y A R+ +++V ATD+D GLV Y ++ N+ +F +D T E Q P
Sbjct: 658 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRG--HFAIDSLTGEIQVVAP 715
Query: 76 I--------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ QD G ++T +I+V DIND P F S P++ SV E G
Sbjct: 716 LDFEAEREYVLRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLENAPLG 775
Query: 118 LAVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+V + A DAD G+NA + YS V D PFV+++ TG + + LD E + Y
Sbjct: 776 HSVIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATGWVSVSGPLDRESVEHYF 831
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 25/178 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
SL+ G ++ D +++Q+ ATD+D+ G V+Y N D F ++P +
Sbjct: 1072 SLYTGLVSEDAPPF-TSVLQISATDRDAHANGRVQY-TFQNGEDGDGDFTIEPTSGIVRT 1129
Query: 71 ------------EHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
E D G L + ++ + V D+ND P F + +E V E
Sbjct: 1130 VRRLDREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPIFPAEEFEVRVKENSI 1189
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
G V ++ A D DEG NA + Y + E +IP F +D +G++ LDYE +Q Y+
Sbjct: 1190 VGSVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYV 1247
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 86/185 (46%), Gaps = 32/185 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPAT----- 70
Y R+ E G ++Q++ATD D+ + YR + + AA+ F +DP +
Sbjct: 546 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARSAAAAAFEIDPRSGLIST 605
Query: 71 ------EH------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH QG Q+ G S+T V+I V D ND P+F Y V
Sbjct: 606 SGRVDREHMENYELVVEASDQG--QEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVR 663
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E + V RV ATD D+ N +V+Y++ F +D+ TG+I+ LD+E ++
Sbjct: 664 EDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVVAPLDFEAERE 723
Query: 169 YLERV 173
Y+ R+
Sbjct: 724 YVLRI 728
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V+I +TD N P FQS Y S+ E + G V + A+D D G+NA + Y + +++P
Sbjct: 952 VHINITDANTHRPVFQSAHYSVSMNEDRPVGSTVVVISASDDDVGENARITYFLEDNLPQ 1011
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DA++G I LDYE Q Y
Sbjct: 1012 FRIDADSGAITLQAPLDYEDQVTY 1035
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 29/180 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT------- 70
Y + + G +++V A D D+G+ G + Y L N+ + F++DP +
Sbjct: 438 YQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 497
Query: 71 --------EH--QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
H + QD G LS+T V + V D ND +P F+ Y ++ E ++G
Sbjct: 498 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRENVEEG 557
Query: 118 LAVGRVHATDADEGQNAVVYY--------SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ ++ ATD D NA + Y F +D +G I T+ +D E + Y
Sbjct: 558 YPILQLRATDGDAPPNANLRYRFVGPPAARSAAAAAFEIDPRSGLISTSGRVDREHMENY 617
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 91 RVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP---- 145
R +++P+F Y+ VPE + G AV RV A D D G+ + YS+ +
Sbjct: 422 RFRRTANRHPQFPQYNYQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSL 481
Query: 146 --FVVDANTGDIRTNKALDYEKQQLYLERV 173
F +D +G IRT ALD E + + RV
Sbjct: 482 ELFSIDPQSGLIRTAAALDRESMERHYLRV 511
Score = 42.4 bits (98), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEH 72
S Y + +G T++ + A+D D G+ + Y L DN F +D A
Sbjct: 968 SAHYSVSMNEDRPVGSTVVVISASDDDVGENARITYFLEDN----LPQFRIDADSGAITL 1023
Query: 73 QGPIQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQD 116
Q P+ E ++ T + R V D+ND P+F + Y V E
Sbjct: 1024 QAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVTSLYTGLVSEDAP 1083
Query: 117 GL-AVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ++ ATD D N V Y+ D F ++ +G +RT + LD E +Y
Sbjct: 1084 PFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVY 1141
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 72/177 (40%), Gaps = 30/177 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGPI--------- 76
LG +++ ++A D D G+ +EY L D F ++ AT GP+
Sbjct: 774 LGHSVIHIQAVDADHGENARLEYSLTGVAPDTP--FVINSATGWVSVSGPLDRESVEHYF 831
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDA 128
+D G LS++A+V + V D+ND PEF Y + E G +V V A D
Sbjct: 832 FGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGTSVVSVTAVDR 891
Query: 129 DEGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
D N+ + Y + G + LDY KQ+ Y + V S A
Sbjct: 892 DA--NSAISYQITGGNTRNRFAISTQGGVGLVTLALPLDY-KQERYFKLVLTASDRA 945
Score = 35.8 bits (81), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 66/161 (40%), Gaps = 28/161 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPI- 76
+G + Q+ A D D G + Y++++ N + + +LD + I
Sbjct: 1190 VGSVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIV 1249
Query: 77 --QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRVHA 125
L S ATV+IR+ D ND +P + F + P G +GR+ A
Sbjct: 1250 VQATSAPLVSRATVHIRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSG----IIGRIPA 1305
Query: 126 TDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
D D + + ++ VV+ +G++R ++ LD +
Sbjct: 1306 YDPDVSDHLFYSFERGNELQLLVVNQTSGELRLSRKLDNNR 1346
>gi|449484563|ref|XP_002196691.2| PREDICTED: protocadherin-20 [Taeniopygia guttata]
Length = 945
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 74/160 (46%), Gaps = 26/160 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQGP 75
L ++ ATD DSG+ G V Y L DA SYF LD T +
Sbjct: 548 LTKLHATDADSGERGQVSYFL---GPDAPSYFALDKTTGVLTVSTQLDREEKEKYRYTVK 604
Query: 76 IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQ 132
D G S ATV I V D ND +P F + + F VPE G +G + TDAD GQ
Sbjct: 605 AVDSGFPPRESIATVTITVLDKNDNSPRFINKDFSFFVPENFPGFGEIGVISVTDADAGQ 664
Query: 133 NAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
N V SV DI FV+D G +R +LD E+Q Y+
Sbjct: 665 NGWVALSVLNGSDI-FVIDTGKGVLRAKVSLDREQQSSYI 703
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 62/138 (44%), Gaps = 17/138 (12%)
Query: 42 DSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPE 101
D+GK G++ ++ + +SY A + P LSSTA + I + DIND NP
Sbjct: 682 DTGK-GVLRAKVSLDREQQSSYILWIEAVDGGDP-----ALSSTAKITILLLDIND-NPP 734
Query: 102 FQSLP-----YEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV-----PEDIPFVVDAN 151
P Y +P G + V+A D D G NAV+ YS+ P F +D
Sbjct: 735 LVLFPQSNMSYLLVLPSTLPGSPITEVYAVDKDTGMNAVIAYSIIGRRGPRPESFRIDPK 794
Query: 152 TGDIRTNKALDYEKQQLY 169
TG+I ++L LY
Sbjct: 795 TGNITLEESLMQNDYGLY 812
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 70/163 (42%), Gaps = 33/163 (20%)
Query: 38 ATDKDSGKFGLVEYRLLDN------------NTDAASYFNLDPATEHQGPIQDE------ 79
A D D G G+ YRL DN N + Y + A + + QDE
Sbjct: 228 ALDPDMGTNGVQTYRLRDNYGVFTLDVEENENGERTPYLIVMGALDRE--TQDEYVTVIV 285
Query: 80 ---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
GG L +AT+ I ++DIND P+F ++ G V VHA D D G
Sbjct: 286 AEDGGTPPLVGSATLTIGISDINDNCPQFNDSQLNVTLYGNSSLGTHVATVHAVDMDLGS 345
Query: 133 NAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
NA + YS + +P F ++ +TG I + +D + +L+
Sbjct: 346 NAQITYSYSQKVPQPSRDLFHLNESTGAIILSTKVDGDTPRLH 388
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 94 DINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSVPEDIP--FVVDA 150
D ND +P F E S+ E A + ++HATDAD G+ V Y + D P F +D
Sbjct: 521 DDNDNSPVFSEQLIELSIEENNVPNAFLTKLHATDADSGERGQVSYFLGPDAPSYFALDK 580
Query: 151 NTGDIRTNKALDYEKQQLY 169
TG + + LD E+++ Y
Sbjct: 581 TTGVLTVSTQLDREEKEKY 599
>gi|395542518|ref|XP_003773176.1| PREDICTED: protocadherin-23 [Sarcophilus harrisii]
Length = 2705
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 88/179 (49%), Gaps = 27/179 (15%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LDPA 69
A + E+G + + A D D G+ G + Y +L N + + LD
Sbjct: 956 AYVSEDEEIGSLVHHIVAKDPDEGRNGRITYHILSGNENKTFMLDEISGLLTTTCPLDYE 1015
Query: 70 TEHQGPIQ----DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR 122
T+ + D+G LS+T T+ I V DIND+ PEF+ YE +V E QD G V +
Sbjct: 1016 TQTFHVLTLLSLDDGLPALSATQTLTIYVLDINDEVPEFKQHLYEVTVAENQDPGQYVTK 1075
Query: 123 VHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLERVFL 175
V A D D G N+ +++ + IP F ++++TG++ T LD E Q+++ RV +
Sbjct: 1076 VEAVDRDSGINSQLHFEI---IPTAVSGLFKINSSTGEMVTAAILDRETQEIFTLRVLV 1131
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 79/166 (47%), Gaps = 38/166 (22%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI---------------- 76
++QV A D DSG G +EY +L N D A F +D + G I
Sbjct: 1591 IIQVFAVDLDSGLNGQIEYSILSGNQDEA--FQIDAVS---GVIATNMVLDYELTNSYSL 1645
Query: 77 ----QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVG----RVHAT 126
D+G LS+TA V I+V D+ND P F LP+E V Q+ + VG RVHA
Sbjct: 1646 VVHAADKGIPRLSATAVVKIQVVDLNDNIPAF--LPFE-RVEITQESIPVGSLVTRVHAH 1702
Query: 127 DADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
D D G A+V+ + P F +D NTG + K LD+E+ Y
Sbjct: 1703 DRDSGP-ALVFSFTKKGNPGNKFTIDHNTGAVILAKPLDFEEGHEY 1747
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 78/180 (43%), Gaps = 41/180 (22%)
Query: 34 MQVKATDKDSGKFGLVEYRLLD--NNTDAASYFNLDPATEHQGPIQD------------- 78
M VKA+D D+G++G +EY L D ++++ + F +DP + H QD
Sbjct: 1 MVVKASDADTGRYGHIEYFLYDGFHSSEKSQAFQIDPHSGHICVSQDIDREQDPASYDLL 60
Query: 79 ------------------EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLA 119
+GGLS+ A V + + D+ND P F Y S+ Q G
Sbjct: 61 VKAQDGDEKRMTHFSFIQQGGLSAQAFVRVELKDVNDNQPVFNPASYVTSISGHTQPGTE 120
Query: 120 VGRVHATDADEGQNAVVYYS-VPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
+ V ATD D G VV Y +P D F VD+ TG I L + L VFLI
Sbjct: 121 ILNVVATDRDAGIYGVVAYELIPGDFSSLFTVDSATGIIYLVSTLSH----LESTSVFLI 176
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 70/161 (43%), Gaps = 31/161 (19%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQGP--IQD 78
V ATD+DSGK G + Y LL + +F ++P T HQ + D
Sbjct: 544 VVATDRDSGKNGQLSYFLLSD----GKFFKINPNTGEIINWMALDREQQVHHQLTVLVTD 599
Query: 79 EGGLSSTATV--NIRVTDINDKNPEFQSL----PYEFSVPEGQDG-LAVGRVHATDADEG 131
G AT+ I V D+ND P F + + EGQ + V V A D D G
Sbjct: 600 HGSPPRNATMITYISVKDLNDNKPYFPQFLSGKELKIKILEGQTADMLVTTVFAKDLDSG 659
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
N + YS+ + F +DAN+G+IRT L Y + Y
Sbjct: 660 NNGEILYSLFSEESSEHFKIDANSGEIRTTTPLSYNHRPHY 700
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PED 143
V + V D+ND P F Y+ SV EGQ + +V A D D G N + YS+ +D
Sbjct: 1558 VTVLVQDVNDNVPVFHPNTYQTSVSEGQIFNTQIIQVFAVDLDSGLNGQIEYSILSGNQD 1617
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLY 169
F +DA +G I TN LDYE Y
Sbjct: 1618 EAFQIDAVSGVIATNMVLDYELTNSY 1643
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 72/178 (40%), Gaps = 32/178 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGP 75
Y A R+ +G ++ V A D DSG + Y ++ N +F +D A + P
Sbjct: 2003 YYAHVRESLPVGSQIVVVSAKDHDSGANSEITYTIISGN--EREHFQIDGETGAIDLIKP 2060
Query: 76 IQDEGGLSSTATVN---------------IRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
+ E L T TV I V D ND P+F VPE +V
Sbjct: 2061 LDYEDTLMFTLTVQASDRGTNHFAFTVVFISVLDDNDYAPQFIFSSLNCVVPENLPNFSV 2120
Query: 121 -GRVHATDADEGQNAVVYYSVP------EDIP-----FVVDANTGDIRTNKALDYEKQ 166
HA D D G + YS+ ++IP F +D TGDI T + LDYE +
Sbjct: 2121 MCTAHALDFDAGPYGQLTYSIQSPCLMNDEIPQDHDLFFIDPLTGDIYTKQILDYESE 2178
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 60/126 (47%), Gaps = 10/126 (7%)
Query: 48 LVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPY 107
LV LD T AS+ + A++H P L+STAT+ I V D+ND P F S Y
Sbjct: 1950 LVLNHPLDRET-MASHELIIMASDHGHP-----PLNSTATILIDVLDVNDNTPIFNSPEY 2003
Query: 108 EFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDY 163
V E G + V A D D G N+ + Y++ E F +D TG I K LDY
Sbjct: 2004 YAHVRESLPVGSQIVVVSAKDHDSGANSEITYTIISGNEREHFQIDGETGAIDLIKPLDY 2063
Query: 164 EKQQLY 169
E ++
Sbjct: 2064 EDTLMF 2069
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 69/162 (42%), Gaps = 30/162 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G ++ V ATD+D+G +G+V Y L+ D +S F +D AT G I
Sbjct: 118 GTEILNVVATDRDAGIYGVVAYELIPG--DFSSLFTVDSAT---GIIYLVSTLSHLESTS 172
Query: 77 -------QDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
+D GGL+S A V I + F+ Y FS+ E + VG V A
Sbjct: 173 VFLIVSARDGGGLTSVTNADVTIHILQTALAPAIFERSKYVFSIHEDMPEDSPVGTVKAR 232
Query: 127 DADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQ 166
+ V Y D F +D+ G IRT K LD+E Q
Sbjct: 233 EPLNSLETVSYRISSGDPYGSFTIDSKFGVIRTQKQLDHETQ 274
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 20/167 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------L 66
Y + + G + +V+A D+DSG + + ++ N L
Sbjct: 1058 LYEVTVAENQDPGQYVTKVEAVDRDSGINSQLHFEIIPTAVSGLFKINSSTGEMVTAAIL 1117
Query: 67 DPATEH----QGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
D T+ + ++D+G LSST T+ V D ND P+F E VPE Q+ +
Sbjct: 1118 DRETQEIFTLRVLVKDQGVPQLSSTMTILCHVKDENDHAPKFIIPNPEIQVPENQEPEII 1177
Query: 121 GRVHATDADEGQN-AVVYYSVPEDIP--FVVDANTGDIRTNKALDYE 164
+ A D D G N A+ ++ + +I F ++ +G++ T ++LD E
Sbjct: 1178 YTILAMDMDTGNNGAMQFHIIGGNIEQYFTINETSGELSTTRSLDRE 1224
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---P 141
T T + + D+ND +P F S + + + G V + A D DEG+N + Y +
Sbjct: 933 TMTAKVVILDVNDHSPSFVSSAVAYVSEDEEIGSLVHHIVAKDPDEGRNGRITYHILSGN 992
Query: 142 EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
E+ F++D +G + T LDYE Q ++
Sbjct: 993 ENKTFMLDEISGLLTTTCPLDYETQTFHV 1021
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 25/161 (15%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGP-------IQD 78
V A D DSG G + Y L + +++ +F +D P + + P D
Sbjct: 651 VFAKDLDSGNNGEILYSLF--SEESSEHFKIDANSGEIRTTTPLSYNHRPHYRMTVVASD 708
Query: 79 EGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAV 135
+G L A ++I+V ++ + P +PE + + + +TD + N
Sbjct: 709 QGMPPLQGHAVIHIQVIPLSKERPSVSRYIQHLVIPENFKPAKIMSLIKSTDYLQQHNGK 768
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ S+ E DI F +D++TGD+ ++ LDYE YL RV
Sbjct: 769 LQLSIIEEDKDIHFAIDSSTGDLFLSRELDYEMTSHYLLRV 809
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 76 IQDEGGLS---STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEG 131
IQ + G S S+ VNI + D+ND P F++ E + + G A+ HA D D G
Sbjct: 281 IQSQLGSSPVYSSTQVNITIIDVNDNPPIFRTASDEVKLLQSTLPGTALYIAHAEDKDSG 340
Query: 132 QNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQ 167
QN V Y++ F +D++TG I + + E Q
Sbjct: 341 QNGFVQYAIENQRSSIFTIDSDTGVIYLSGTIGQEMHQ 378
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 37/181 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y ++ +G ++++ A D+D G G VEY L + DA F +D + G ++
Sbjct: 1268 YQTWVKEDLAVGSVILELTAVDEDGGLNGQVEYFLTN---DALGSFTID---KMAGTLKL 1321
Query: 79 EGGL-----------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
GL +T + + + D+ND +P F P + +
Sbjct: 1322 VQGLDRETRSQFVFTVVASDCSVQNPRKTTVHLTVNIGDVNDNSPVFAQNPLDVFI---S 1378
Query: 116 DGLAVGRVHAT----DADEGQN-AVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
++V + AT D+D G N AVV++ F +D +G+++ K L E ++L
Sbjct: 1379 SQMSVNQTIATLISYDSDLGLNGAVVFHFAETQALFHIDEYSGEVQLQKQLSSEHFPIWL 1438
Query: 171 E 171
+
Sbjct: 1439 Q 1439
Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 67/160 (41%), Gaps = 30/160 (18%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG------PIQD 78
+ A D D+G G +++ ++ N + YF ++ + EH D
Sbjct: 1180 ILAMDMDTGNNGAMQFHIIGGNIE--QYFTINETSGELSTTRSLDREHISNFTLTIECSD 1237
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRV----HATDADEGQ 132
G G SS + + V D ND +P F + Y+ V E LAVG V A D D G
Sbjct: 1238 LGNPGRSSITELKVIVLDDNDHSPTFSASHYQTWVKE---DLAVGSVILELTAVDEDGGL 1294
Query: 133 NAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYL 170
N V Y + D F +D G ++ + LD E + ++
Sbjct: 1295 NGQVEYFLTNDALGSFTIDKMAGTLKLVQGLDRETRSQFV 1334
Score = 39.3 bits (90), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 26/145 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY + +G +++ V ATD+D G G + Y++L +A F++DP
Sbjct: 1782 FYQVTLPEMTPVGSSILTVSATDQDIGINGRISYKIL----SSAEGFSVDPQNGSIFIIK 1837
Query: 71 -----EHQGPIQ------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQD 116
+ IQ D G GL++ A V + + D+N+ P+F Y +V E
Sbjct: 1838 PVMLMDKTSTIQLLVEAKDGGTPGLTALALVEVEIQDVNNHPPQFTMEYYNITVSEDAAI 1897
Query: 117 GLAVGRVHATDAD-EGQNAVVYYSV 140
G + A D D +N V YS+
Sbjct: 1898 GTTLLTFSAIDLDWTHENTNVKYSI 1922
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAV 135
+D+G ++T V + V I++ P F Y F +P+ A+G+V A+DAD G + +
Sbjct: 2188 EDKGETTATLMVQVDVEGIDEYEPIFTQDQYFFGLPDIHHTRQAIGKVEASDADAGVDGL 2247
Query: 136 VYYSVPEDIPFV-VDANTGDI 155
V Y++ F+ ++ +G++
Sbjct: 2248 VLYTLATSSTFLSINKTSGNV 2268
Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSV-----PEGQDGLAVGRVHATDADEGQNAVVYY 138
STA + + V D ND P F V P+G +G V ATD D G+N + Y
Sbjct: 505 STA-ITVHVLDENDNCPIFLHDVLFLQVEENPTPQG----VIGTVVATDRDSGKNGQLSY 559
Query: 139 SVPEDIPFV-VDANTGDIRTNKALDYEKQQLYLERVFLIS 177
+ D F ++ NTG+I ALD E QQ++ + L++
Sbjct: 560 FLLSDGKFFKINPNTGEIINWMALDRE-QQVHHQLTVLVT 598
>gi|109107523|ref|XP_001100797.1| PREDICTED: protocadherin-16-like [Macaca mulatta]
Length = 3386
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 82/162 (50%), Gaps = 28/162 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGP- 75
G +++V A D D G G V Y L +F++DP + E Q
Sbjct: 577 GSFVVRVTARDPDQGTNGQVTYSLAPGAH--THWFSIDPTSGIITTAASLDYELEPQPQL 634
Query: 76 --IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ +GGL +S+ATVN+ + D+ND P+FQ Y S+PEG Q G +V ATDAD
Sbjct: 635 TVVATDGGLPPLASSATVNVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDAD 694
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEK 165
G ++ YS+ + PF +DA++GD+ T + LD ++
Sbjct: 695 SGLFGLLSYSLGAGLGSSGSPPFRIDAHSGDVCTTRTLDRDQ 736
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 27/177 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + R+ G +L+ ++ATD D G G V Y + + + F+LDP T
Sbjct: 1742 YSVLLRENSAPGTSLLTLRATDPDLGANGQVTYGGVSSGS-----FSLDPDTGVLTTLRA 1796
Query: 71 ---EHQGPI------QDEGGLS--STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
E Q I QD G + AT+ + V D ND P F S VPEGQD
Sbjct: 1797 LDREEQEEINLTVYAQDRGSPPQLTHATIRVAVEDENDHAPTFGSTHLSLEVPEGQDPQT 1856
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ + A+D D G N + Y + + P FV+D +G+ T + LD E + + R+
Sbjct: 1857 LTMLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQLRI 1913
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 28/167 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQ 73
+G L+ V+A+D D G GLV + + ++ D A F LD ++ HQ
Sbjct: 2705 VGAELLHVEASDVDPGPHGLVRFTV--SSGDPAGLFELDESSGTLRLAHALDCETQARHQ 2762
Query: 74 GPIQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
+Q G + A V I V D+ND P F S+ E Q G V +HA D D
Sbjct: 2763 LVVQAADPAGAHFALAPVTIEVQDVNDHGPAFPLNLLSTSLAENQPPGTLVTTLHAIDGD 2822
Query: 130 EGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYEKQQLY 169
G + YS+ E P F ++++TG++R A DYE + +
Sbjct: 2823 AGAFGKLRYSLLEAGPGPEGREAFALNSSTGELRARVAFDYEHTESF 2869
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 20/158 (12%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL---------------DPATEHQGPI 76
TL ++A+D D G G ++YR+LD + A +L +PA + +
Sbjct: 1856 TLTMLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQLRIEA 1915
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQN 133
+D G LS+T + + V D ND P F Y VPE G + ++ A D D G N
Sbjct: 1916 RDGGQPALSATLLLTVTVLDANDHAPAFPVPAYSVEVPEDVPAGTLLLQLQAHDPDAGAN 1975
Query: 134 AVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
V Y + F+++ ++G++RT ALD E+ Y
Sbjct: 1976 GRVTYYLGAGTAGAFLLEPSSGELRTAAALDREQCPSY 2013
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 21/147 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNT--DAASYFNLDPAT-----------EHQGPI 76
G + + A D D+G FG + Y LL+ + F L+ +T EH
Sbjct: 2810 GTLVTTLHAIDGDAGAFGKLRYSLLEAGPGPEGREAFALNSSTGELRARVAFDYEHTESF 2869
Query: 77 Q------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ D G LS++ TV++ VT ++ +P F + + F VPEG + G ++G V ATD D
Sbjct: 2870 RLLVGAADAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQVPEGARRGHSLGHVQATDED 2929
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDI 155
G + +V YS+ P F ++ TG +
Sbjct: 2930 GGADGLVLYSLATSSPYFGINQTTGAL 2956
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 64/146 (43%), Gaps = 26/146 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY--------------RLLDNNTDAASY 63
FY A + + G +QV ATD DSG FGL+ Y R+ ++ D +
Sbjct: 670 FYNASLPEGTQPGTCFLQVTATDADSGLFGLLSYSLGAGLGSSGSPPFRIDAHSGDVCTT 729
Query: 64 FNLDPATEHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEG 114
LD QGP D GGL S V + ++D ND P+F Y S+ +
Sbjct: 730 RTLD---RDQGPSSFDFTVTAVDGGGLKSMVYVKVFLSDENDNPPQFYPREYAASISAQS 786
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV 140
G AV RV A D D+G + + Y +
Sbjct: 787 PPGTAVLRVRAHDPDQGSHGRLSYHI 812
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 67/158 (42%), Gaps = 30/158 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPI--- 76
G L+Q++A D D+G G V Y L A F L+P++ Q P
Sbjct: 1959 GTLLLQLQAHDPDAGANGRVTYYL---GAGTAGAFLLEPSSGELRTAAALDREQCPSYTF 2015
Query: 77 -------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-----GQDGLAVGRVH 124
G LS+T +V I V D+ND P F + P +P LA+ +
Sbjct: 2016 AVSAVDGAAAGPLSTTVSVTITVRDVNDHAPTFPTSPLRLRLPRPGPSFSTPTLALATLR 2075
Query: 125 ATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKA 160
A D D G NA + Y + P VD+ TG+IR ++
Sbjct: 2076 AEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARS 2113
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 72/167 (43%), Gaps = 32/167 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQ----- 73
G ++QV+A D G V Y L A+S F L+P + E Q
Sbjct: 1104 GTQVLQVQAQAPDGGP---VTYHLAAEG--ASSPFGLEPQSGWLWVRAALDREAQELYIL 1158
Query: 74 ------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
G + G + TATV + + + N+ +P P +V E Q G VGRV AT
Sbjct: 1159 KVMAVSGSKAELGQQTGTATVRVSILNQNEHSPRLSEDPTFLAVAENQPPGTNVGRVFAT 1218
Query: 127 DADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
D D G N + YS+ + F + TG++ T + LD E+Q Y
Sbjct: 1219 DRDSGPNGRLTYSLQQLSEDSKAFRIHPQTGEVTTLQTLDREQQSTY 1265
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 71/160 (44%), Gaps = 27/160 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDA------------ASYFNLDP 68
G + V A D D G+ V YRL L ++T A A + +
Sbjct: 1649 GPAALHVVARDPDLGEAARVSYRLASGGDGHFRLHSSTGALSVVQPLDREQRAEHVLIVV 1708
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
A++H P + S+T + + V D+ND+ P FQ Y + E G ++ + ATD
Sbjct: 1709 ASDHGSPPR-----SATQVLTVSVADVNDEAPTFQQQEYSVLLRENSAPGTSLLTLRATD 1763
Query: 128 ADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQ 167
D G N V Y F +D +TG + T +ALD E+Q+
Sbjct: 1764 PDLGANGQVTYGGVSSGSFSLDPDTGVLTTLRALDREEQE 1803
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 76/176 (43%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------P 68
Y A + G +++V+A D D G G + Y +L N+ F LD P
Sbjct: 778 YAASISAQSPPGTAVLRVRAHDPDQGSHGRLSYHILAGNS--PPLFALDEQSGLLTVAWP 835
Query: 69 ATEHQGPI-------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGL 118
+ QD GGL + +A VNI + P F+ L Y FSVPE G
Sbjct: 836 LARRANSVVQLEIGAQDGGGLQAEPSARVNISIVPGTPTPPIFEQLQYVFSVPEDVAPGT 895
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
+VG V A + G+ A V S+ P F +DA +G ++T + LD E LE
Sbjct: 896 SVGIVQAHNP-PGRLAPVTLSLSGGDPRGLFSLDAISGLLQTLRPLDRELLGPVLE 950
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE---- 142
+++ + DIND P F Y V E G V +V A+DAD G N V Y +
Sbjct: 329 LDVTLLDINDHAPAFNQSRYHAVVSESLAPGSPVLQVFASDADAGANGAVTYEINRRQSE 388
Query: 143 -DIPFVVDANTGDIRTNKALDYEKQQLY 169
D PF +DA+TG ++ + LD+E+++++
Sbjct: 389 GDGPFSIDAHTGLLQLERPLDFEQRRVH 416
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 72/172 (41%), Gaps = 29/172 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------EHQGP-------- 75
G + ++A D DSG V + LL A F +DP T H GP
Sbjct: 998 GTPIYTLRALDPDSGVNSRVTFTLLAGGGGA---FTVDPTTGHVRLMRHLGPSGGPAHEL 1054
Query: 76 ---IQDEGGLSSTATVNIRVT--DINDKN--PEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
+D G T+ +RV D+ + P+F S Y +P G G V +V A
Sbjct: 1055 ELEARDGGSPPRTSHFRLRVVVQDVGTRGLAPQFDSPTYRVDLPSGTIPGTQVLQVQAQA 1114
Query: 128 ADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D G V Y+ E PF ++ +G + ALD E Q+LY+ +V +S
Sbjct: 1115 PDGG--PVTYHLAAEGASSPFGLEPQSGWLWVRAALDREAQELYILKVMAVS 1164
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 78/172 (45%), Gaps = 35/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G + +V ATD+DSG G + Y L + D+ + F + P T E Q
Sbjct: 1209 GTNVGRVFATDRDSGPNGRLTYSLQQLSEDSKA-FRIHPQTGEVTTLQTLDREQQSTYQL 1267
Query: 76 ---IQDEGGLS--STATVNIRVTDINDKNPEF--------QSLPYEF--SVPEGQDGLAV 120
+QD G S +T TV++ V D+ND +P F LP + VP G V
Sbjct: 1268 LVQVQDGGSPSHSTTGTVHVAVLDLNDNSPTFLQASGAAAGGLPIQVPDRVPPGT---LV 1324
Query: 121 GRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ A D DEG+N + Y++ P F ++ ++G++ T L ++ Y+
Sbjct: 1325 TTLQAKDPDEGENGTILYTLTGPGSELFSLNPHSGELLTAAPLIRAERPHYV 1376
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 70/180 (38%), Gaps = 39/180 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + L L+QV+A D D G G + Y L + A F++DP
Sbjct: 2264 YVAFLPESRPLEGPLLQVEADDLDQGSGGQISYSLAASQP-ARGLFHVDPATGTITTTAI 2322
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
AT+ P L +AT+ + V D ND P P+E V E
Sbjct: 2323 LDREIWAETRLVLMATDRGSP-----ALVGSATLTVMVIDTNDNRPTIPQ-PWELRVSED 2376
Query: 114 GQDGLAVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + +V D D G V++Y S P+D PF V G + LD+E+ Y
Sbjct: 2377 ALLGSEIAQVTGNDVDSG--PVLWYVLSPSGPQD-PFSVGRYGGRVSLTGPLDFEQCDRY 2433
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------- 68
Y M + G ++ V ATD+DSG G + Y L A F++DP
Sbjct: 2468 LYQVMLLEHTPPGSAILSVSATDRDSGANGHISYHL----ASPADGFSVDPNNGTLFTIV 2523
Query: 69 ---ATEHQGP--------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG- 114
A H G +D G G ++ ATV++++ D ND P F Y +V E
Sbjct: 2524 GTVALGHDGSGAVDVVLEARDHGTPGRAARATVHVQLQDQNDHAPSFTLPHYRVAVTEDL 2583
Query: 115 QDGLAVGRVHATDADEGQ-NAVVYYSV 140
G + + ATDAD + +A V YS+
Sbjct: 2584 PPGSTLLTLEATDADGSRTHAAVEYSI 2610
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 73/178 (41%), Gaps = 40/178 (22%)
Query: 30 GVTLMQVKATDKDSGK-FGLVEYRLLDNNTDAASYFNLDP----ATEHQGP-IQDEGGL- 82
G TL+ ++ATD D + VEY ++ N F L+P A E GP Q G L
Sbjct: 2586 GSTLLTLEATDADGSRTHAAVEYSIISGNW--GRVFQLEPRLAEAGESAGPGPQALGCLV 2643
Query: 83 ---------------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
SS V + V D+ND P F Y +VPE
Sbjct: 2644 LLEPLDFESLTQYNLTVAAADRGQPPQSSVVPVTVTVLDVNDNPPVFTRASYRVAVPEDT 2703
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
G + V A+D D G + +V ++V P F +D ++G +R ALD E Q +
Sbjct: 2704 PVGAELLHVEASDVDPGPHGLVRFTVSSGDPAGLFELDESSGTLRLAHALDCETQARH 2761
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 15/93 (16%)
Query: 82 LSSTATVNIRVTDINDKNPEF-------QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
L + A + VTD+ND P F + LP E ++P G V RV A D D+G N
Sbjct: 540 LRAEAAFVLHVTDVNDNAPAFDRQFYQPEPLP-EVALP----GSFVVRVTARDPDQGTNG 594
Query: 135 VVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
V YS+ F +D +G I T +LDYE
Sbjct: 595 QVTYSLAPGAHTHWFSIDPTSGIITTAASLDYE 627
>gi|291393635|ref|XP_002713434.1| PREDICTED: anchor protein-like [Oryctolagus cuniculus]
Length = 3307
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 85/176 (48%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQ--GP 75
Y A R+ +++V ATD+D GLV Y ++ N+ +F +D T E Q P
Sbjct: 547 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRG--HFAIDSLTGEIQVVAP 604
Query: 76 I--------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ QD G ++T +I+V DIND P F S P++ SV E G
Sbjct: 605 LDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIFVSTPFQVSVLENAPLG 664
Query: 118 LAVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+V + A DAD G+NA + YS V D PFV+++ TG + + LD E + Y
Sbjct: 665 HSVIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATGWVSVSGPLDRESVEHYF 720
Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQG 74
+++Q+ ATD+D+ G V+Y N D F ++P + E
Sbjct: 976 SVLQISATDRDAHANGRVQYTF-QNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTA 1034
Query: 75 PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G L + ++ + V D+ND P F + +E V E G V ++ A D DEG
Sbjct: 1035 YAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDEG 1094
Query: 132 QNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + + +IP F +D +G++ LDYE +Q Y+
Sbjct: 1095 PNAHIMYQIVDGNIPELFQMDIFSGELTALIDLDYEARQEYV 1136
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 56/185 (30%), Positives = 85/185 (45%), Gaps = 32/185 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL---DNNTDAASYFNLDPAT----- 70
Y R+ E G ++Q++ATD D+ + YR + T AA+ F +DP +
Sbjct: 435 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARTAAAAAFEIDPRSGLIST 494
Query: 71 ------EH------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH QG Q+ G S+T V+I V D ND P+F Y V
Sbjct: 495 SGRVDREHMESYELVVEASDQG--QEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVR 552
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E + V RV ATD D+ N +V+Y++ F +D+ TG+I+ LD+E ++
Sbjct: 553 EDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVVAPLDFEAERE 612
Query: 169 YLERV 173
Y R+
Sbjct: 613 YALRI 617
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V+I +TD N P FQS Y S+ E + G V + A+D D G+NA + Y + +++P
Sbjct: 841 VHINITDANTHRPVFQSAHYSVSMNEDRPVGSTVVVISASDDDVGENARITYFLEDNLPQ 900
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F ++A++G I LDYE Q Y
Sbjct: 901 FRINADSGAITLQAPLDYEDQVTY 924
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 47/180 (26%), Positives = 76/180 (42%), Gaps = 29/180 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT------- 70
Y + + G +++V A D D+G+ G + Y L N+ + F++DP T
Sbjct: 327 YQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQTGLIRTAA 386
Query: 71 --------EHQGPI--QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
H + QD G LS+T V + V D ND P F+ Y ++ E ++G
Sbjct: 387 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRENVEEG 446
Query: 118 LAVGRVHATDADEGQNAVVYY--------SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ ++ ATD D NA + Y F +D +G I T+ +D E + Y
Sbjct: 447 YPILQLRATDGDAPPNANLRYRFVGPPAARTAAAAAFEIDPRSGLISTSGRVDREHMESY 506
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 22/175 (12%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN------NTDAASYFNLDPA 69
S Y + +G T++ + A+D D G+ + Y L DN N D+ + L
Sbjct: 857 SAHYSVSMNEDRPVGSTVVVISASDDDVGENARITYFLEDNLPQFRINADSGA-ITLQAP 915
Query: 70 TEHQGPI--------QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL- 118
+++ + +D G + T V + V D+ND P+F + Y V E
Sbjct: 916 LDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFT 975
Query: 119 AVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ++ ATD D N V Y+ D F ++ +G +RT + LD E +Y
Sbjct: 976 SVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVY 1030
Score = 43.9 bits (102), Expect = 0.028, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVD 149
+++P+F Y+ VPE + G AV RV A D D G+ + YS+ + F +D
Sbjct: 317 NRHPQFPQYNYQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSID 376
Query: 150 ANTGDIRTNKALDYEKQQLYLERV 173
TG IRT ALD E + + RV
Sbjct: 377 PQTGLIRTAAALDRESMERHYLRV 400
Score = 42.7 bits (99), Expect = 0.057, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 69/176 (39%), Gaps = 28/176 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI--------- 76
LG +++ ++A D D G+ +EY L D F ++ AT GP+
Sbjct: 663 LGHSVIHIQAVDADHGENARLEYSLTGVAPDTP--FVINSATGWVSVSGPLDRESVEHYF 720
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDAD 129
+D G LS++A+V + V D+ND PEF Y + E + V T D
Sbjct: 721 FGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNE-DAAVGTSVVSVTAVD 779
Query: 130 EGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
N+ + Y + G + LDY KQ+ Y + V S A
Sbjct: 780 RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLDY-KQERYFKLVLTASDRA 834
Score = 39.7 bits (91), Expect = 0.52, Method: Composition-based stats.
Identities = 36/158 (22%), Positives = 65/158 (41%), Gaps = 28/158 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPI- 76
+G + Q+ A D D G + Y+++D N + + +LD + I
Sbjct: 1079 VGSVVAQITAVDPDEGPNAHIMYQIVDGNIPELFQMDIFSGELTALIDLDYEARQEYVIV 1138
Query: 77 --QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRVHA 125
L S ATV++R+ D ND +P + F + P G +GR+ A
Sbjct: 1139 VQATSAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSG----VIGRIPA 1194
Query: 126 TDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALD 162
D D + + ++ VV+ +G++R ++ LD
Sbjct: 1195 YDPDVSDHLFYSFERGNELQLLVVNQTSGELRLSRKLD 1232
>gi|397473819|ref|XP_003808397.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2 [Pan
paniscus]
Length = 3150
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 85/181 (46%), Gaps = 26/181 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS-YFNLDPAT---EHQG 74
Y R+ E+G ++ V+ATD D+ + YRLL+ + + S F +DP + +G
Sbjct: 523 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRSGVIRTRG 582
Query: 75 PI------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D G S+TA V + V D ND P+F Y V E
Sbjct: 583 PVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYVVQVREDVT 642
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLER 172
G V RV A+D D+G NA+V+YS+ F +DA TG + LDYE + Y R
Sbjct: 643 PGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLR 702
Query: 173 V 173
V
Sbjct: 703 V 703
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LD 67
Y R+ G +++V A+D+D G LV Y ++ N Y + LD
Sbjct: 633 YVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 692
Query: 68 PATEHQGPIQ---DEGG---LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
T + ++ +GG LS+ + V ++V DIND P F S P++ +V E G
Sbjct: 693 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 752
Query: 120 VGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V A DAD G NA + Y V D PF ++ TG I LD E+ Y
Sbjct: 753 VLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFY 805
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------------AASYFNLDPATEHQ-- 73
+G +++ V A D+D+ ++ Y++ NT + LD E Q
Sbjct: 854 VGTSVVTVSAVDRDA--HSVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYV 911
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G TA + + VTD N P FQS Y +V E + G V + ATD D G
Sbjct: 912 LAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 971
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + IP F +DA+TG + T LDYE Q Y
Sbjct: 972 ENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSY 1010
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 33/181 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPATE---- 71
Y A + G + ++A D D G+ G +EY L D+ ++ +F+LDP T
Sbjct: 415 YQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSN--QFFSLDPVTGAVTT 472
Query: 72 -------------HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ QD G S+ AT+ I VTD ND +P F+ Y+ S+ E +
Sbjct: 473 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 532
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV-------PEDIPFVVDANTGDIRTNKALDYEKQQL 168
G V V ATD D NA + Y + P ++ F +D +G IRT +D E+ +
Sbjct: 533 VGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEV-FEIDPRSGVIRTRGPVDREEVES 591
Query: 169 Y 169
Y
Sbjct: 592 Y 592
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLDPATEHQGPIQD- 78
+++Q+ ATD+DSG G V Y + + LD Q ++
Sbjct: 1062 SVLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAY 1121
Query: 79 --EGGLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
+ G+ T V + V D+ND P F+ ++ V E GLAV RV ATD DEG
Sbjct: 1122 AVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGT 1181
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 1182 NAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYEDRPEYV 1222
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSSTA 86
G T++ + ATD+D+G+ + Y + D+ F +D A Q + E +S T
Sbjct: 957 GTTVVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTL 1012
Query: 87 TVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
+ R V D+ND P+F Y+ SV E +V ++ ATD D
Sbjct: 1013 AITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRD 1072
Query: 130 EGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N V+Y+ D F+V++ +G +RT + LD E Y+ R + + K
Sbjct: 1073 SGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYAVDK 1125
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 32/163 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G+ + +V ATD D G + Y++++ N F LD + + D
Sbjct: 1165 IGLAVARVTATDPDEGTNAQIMYQIVEGNI--PEVFQLDIFSGELTALVDLDYEDRPEYV 1222
Query: 79 ------EGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRV 123
L S ATV++R+ D ND P + F S P G A+GRV
Sbjct: 1223 LVIQATSAPLVSRATVHVRLLDRNDNPPVLGNFEILFNNYVTNRSSSFPGG----AIGRV 1278
Query: 124 HATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
A D D + + ++ V ++A+TG+++ ++ALD +
Sbjct: 1279 PAHDPDISDSLTYSFERGNELSLVLLNASTGELKLSRALDNNR 1321
Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 32/136 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASY-------------FN 65
LG ++ V+A D D+G +EYRL ++N T S F
Sbjct: 749 LGYLVLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFYSFG 808
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
++ A +H P L+++A+V++ V D+ND NP F Y + E G +V V
Sbjct: 809 VE-ARDHGTP-----ALTASASVSVTVLDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVS 862
Query: 125 ATDADEGQNAVVYYSV 140
A D D ++V+ Y +
Sbjct: 863 AVDRDA--HSVITYQI 876
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 100 PEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV------PEDIPFVVDANT 152
P+FQ Y+ +VPE Q G V + A D DEG+ + Y++ + F +D T
Sbjct: 408 PQFQPPSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPVT 467
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G + T + LD E + ++ RV
Sbjct: 468 GAVTTAEELDRETKSTHVFRV 488
>gi|432910748|ref|XP_004078505.1| PREDICTED: neural-cadherin-like [Oryzias latipes]
Length = 3255
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 83/186 (44%), Gaps = 31/186 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA--------- 69
Y A + ++G ++ QV ATD DSG G++ Y +L + + + +F++D A
Sbjct: 1403 YEATVPEGAQVGTSVAQVSATDLDSGLHGMIHYTILKDESGDSQFFSIDSASGVIVTRAS 1462
Query: 70 ------------------TEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
+E P Q + TA V I +TD+ND P F YE SV
Sbjct: 1463 FDREQKASYLIEVQSQDSSESARPGQQGQPNTDTAYVRIFITDVNDNAPAFAQPVYEVSV 1522
Query: 112 PEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQ 167
E ++ G + V A D DEG NA + Y + F V+ G I + LDYE +Q
Sbjct: 1523 EEDKEVGFILITVTANDEDEGANAKLRYQITSGNTMGTFDVEPEVGTIFVAQPLDYEMEQ 1582
Query: 168 LYLERV 173
Y R+
Sbjct: 1583 RYELRL 1588
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 58/98 (59%), Gaps = 6/98 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV 140
L+S TV I VTD+ND P F S YE +VPEG Q G +V +V ATD D G + +++Y++
Sbjct: 1378 LASFTTVYINVTDVNDNVPFFLSSTYEATVPEGAQVGTSVAQVSATDLDSGLHGMIHYTI 1437
Query: 141 PEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERV 173
+D F +D+ +G I T + D E++ YL V
Sbjct: 1438 LKDESGDSQFFSIDSASGVIVTRASFDREQKASYLIEV 1475
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 94/203 (46%), Gaps = 40/203 (19%)
Query: 3 PCPIPSALEMTSDSLFYGAMARDKHELGVTLMQVKATDKD---SGKFGLVEYRLLDN--N 57
PCP ALE+ D F G +A + ++M+++ATD D G+ ++ Y ++ N N
Sbjct: 1723 PCP---ALEI--DGCFVGQVAENS-PADTSIMEMRATDLDDPNEGRNAMLTYSIIKNIRN 1776
Query: 58 TDAASYFN--------------LDPATEHQGPI----QDEGGLSSTATVNIRVTDINDKN 99
+ F+ LD + + + +D GGLS T T I V D+ND
Sbjct: 1777 EINLNLFSINTTTGTINTVLSSLDREVQEKYMVVVEARDGGGLSGTGTATIMVLDVNDHP 1836
Query: 100 PEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANT--- 152
P F Y V E + + V ATD D G+NAVV +S+ +D F ++ +
Sbjct: 1837 PIFTERVYSAKVTEDLEVNSEILVVSATDGDRGENAVVTFSIVGGDQDRKFFMETDKMNR 1896
Query: 153 -GDIRTNKALDYEKQQLYLERVF 174
G I+ K +D+EK Q ER F
Sbjct: 1897 RGVIKLKKKVDFEKPQ---ERTF 1916
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 23/154 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------ATEHQGPIQDEGGL 82
G +++V+A D D G G V+Y ++ + +S F+++P A Q E L
Sbjct: 1096 GTFVLRVQARDADMGLNGEVKYGIMHRD-GVSSGFDINPDSGVITTAVSFDRERQREFTL 1154
Query: 83 SSTAT------------VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
S TAT + + + D ND +P+F++ Y++ + E G + R A D D
Sbjct: 1155 SVTATDQAEEPLIGICQITVLILDQNDNDPKFENSRYQYFLREDTPVGTSFLRAAAHDDD 1214
Query: 130 EGQNAVVYYSVPEDIP--FVVDANTGDIRTNKAL 161
+G NA + YS+ P ++ +TG I N +
Sbjct: 1215 QGSNAAITYSLTNQKPAYLHINPSTGWIYVNHPI 1248
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 81 GLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYY 138
GLSS A V++ +TD ND PEF S+ ++PE G ++ +V A D D G N+ + Y
Sbjct: 847 GLSSVAEVSVHITDENDCTPEFLHSIYTRDNIPESIAAGTSLLQVLARDCDSGVNSELSY 906
Query: 139 SVPE---DIPFVVDANTGDIRTNKALDYEK 165
+P DI + G + LDYE+
Sbjct: 907 FIPSADFDI-----TSGGVVSPAHRLDYER 931
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Query: 82 LSSTATVNIRVTDINDKNPEF---QSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVY 137
LSS+A V + + DIN+ P F Q +V E Q G V RV A DAD G N V
Sbjct: 1057 LSSSAQVIVGINDINNNKPVFEECQDYSLNAAVLENQPPGTFVLRVQARDADMGLNGEVK 1116
Query: 138 YSVPE----DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFAT 181
Y + F ++ ++G I T + D E+Q R F +S AT
Sbjct: 1117 YGIMHRDGVSSGFDINPDSGVITTAVSFDRERQ-----REFTLSVTAT 1159
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 72/176 (40%), Gaps = 33/176 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y A + E+ ++ V ATD D G+ +V + ++ + D + D +G I+
Sbjct: 1844 YSAKVTEDLEVNSEILVVSATDGDRGENAVVTFSIVGGDQDRKFFMETD-KMNRRGVIKL 1902
Query: 78 --------------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG 117
++ S A I+V D ND P F P + P +
Sbjct: 1903 KKKVDFEKPQERTFNLTLKAEDNDFFSLAHCLIQVEDSNDHAPVF--FPQFYESPAMSED 1960
Query: 118 LAVG----RVHATDADEGQNAVVYYSVPEDI----PFVVDANTGDIRTNKALDYEK 165
+ VG +V A+D D GQN YS+ +D F+VD +G + +LD EK
Sbjct: 1961 VPVGTIIAQVTASDLDSGQNGHFSYSISKDSDPYNQFLVD-QSGWVVVANSLDREK 2015
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 74/178 (41%), Gaps = 52/178 (29%)
Query: 14 SDSLFYGAMARDKHELGVTLMQVKATDKD-----------------SGKFGLVEY----- 51
S + ++ A+ + +L V +++V ATD D G+F + E+
Sbjct: 1616 SQTEYHAAVTEELTQLPVFILEVSATDPDQEADQTALRYSLHGQGAGGEFTIDEHTGRIY 1675
Query: 52 --RLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF 109
R LD A F L AT+ G GL+ A V + V DIND P F E
Sbjct: 1676 AQRRLDREERPAWRF-LVLATDEGG-----AGLTGFADVLLEVRDINDNAPFFPCPALEI 1729
Query: 110 SVPEGQDGLAVGRV-------------HATDAD---EGQNAVVYYSVPEDIPFVVDAN 151
DG VG+V ATD D EG+NA++ YS+ ++I ++ N
Sbjct: 1730 ------DGCFVGQVAENSPADTSIMEMRATDLDDPNEGRNAMLTYSIIKNIRNEINLN 1781
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 20/171 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT--------DAASYF---NLD 67
Y + E+G L+ V A D+D G + Y++ NT + + F LD
Sbjct: 1518 YEVSVEEDKEVGFILITVTANDEDEGANAKLRYQITSGNTMGTFDVEPEVGTIFVAQPLD 1577
Query: 68 PATEHQGPIQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVG--R 122
E + ++ +G + V + + + ND+ P F Y +V E L V
Sbjct: 1578 YEMEQRYELRLVASDGKWENETHVLVHMVNRNDEAPVFSQTEYHAAVTEELTQLPVFILE 1637
Query: 123 VHATDAD-EGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
V ATD D E + YS+ F +D +TG I + LD E++ +
Sbjct: 1638 VSATDPDQEADQTALRYSLHGQGAGGEFTIDEHTGRIYAQRRLDREERPAW 1688
Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 75/191 (39%), Gaps = 40/191 (20%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYR-----------LLDNNTDAASYFNLDPA 69
AM+ D +G + QV A+D DSG+ G Y L+D + +LD
Sbjct: 1956 AMSEDV-PVGTIIAQVTASDLDSGQNGHFSYSISKDSDPYNQFLVDQSGWVVVANSLDRE 2014
Query: 70 TEHQGPIQ----DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR- 122
Q I D G L+ TA V + V D+ND PEF++ PY+ V E R
Sbjct: 2015 KISQHKIMVLATDAGHPPLTGTAIVMVTVLDVNDNGPEFEA-PYKPVVWENTPAPQAVRM 2073
Query: 123 ------VHATDADEGQN----AVVYYSVPEDIPFVVDANTGDIRTNKA-------LDYEK 165
+H TD D N +V + D + N D R A D E+
Sbjct: 2074 NETSFLLHITDRDTSTNGSPFSVRLLMLTSD---ATNFNLTDFRNGSAAITALRTFDRER 2130
Query: 166 QQLYLERVFLI 176
Q+ Y V +I
Sbjct: 2131 QKEYRLPVLMI 2141
Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 16/146 (10%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA--TEHQGP--------IQDE 79
G +L+QV A D DSG + Y + + D S + PA +++ P + +
Sbjct: 885 GTSLLQVLARDCDSGVNSELSYFIPSADFDITSGGVVSPAHRLDYERPNHIYEFVVVAVD 944
Query: 80 GGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPE--GQDGLAVGRVHATDADEGQNA 134
G + TA++ IRV + ND+ P F Y+ + E G D L V VHA D D +
Sbjct: 945 AGTPPRTGTASIRIRVANSNDEAPVFSQSVYKTFLSEDAGPDTL-VAIVHANDPDGDGVS 1003
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKA 160
ED F +D G I+ ++
Sbjct: 1004 YAITGGNEDSNFHLDNQKGIIKLRRS 1029
>gi|292622519|ref|XP_001921123.2| PREDICTED: neural-cadherin-like [Danio rerio]
Length = 2555
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 84/186 (45%), Gaps = 31/186 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + E+G ++ QV ATD DSG G++ Y +L + + + +F+++ T
Sbjct: 762 YEATVPEGAEIGTSVAQVSATDLDSGLHGMINYIILKDQSGDSQFFSINSYTGIIHTRAT 821
Query: 71 ---EHQG----------------PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
E +G P Q + TA V + VTD+ND P F YE SV
Sbjct: 822 FDREQKGSYLIEVQSQDSSESARPGQQGQPNTDTAYVRVFVTDVNDNAPAFSQPVYEISV 881
Query: 112 PEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQ 167
E ++ G V V A D DEG NA + Y + F V+ G I + LDYE+ Q
Sbjct: 882 EEDKEVGFVVITVTANDEDEGANAKLRYQITSGNTMGTFDVEPEVGTIFIAQRLDYEQVQ 941
Query: 168 LYLERV 173
Y R+
Sbjct: 942 RYELRL 947
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 93/195 (47%), Gaps = 41/195 (21%)
Query: 14 SDSLFYGAMARDKHELGVTLMQVKATDKD---SGKFGLVEYRLLDN--NTDAASYFNLDP 68
+D+ F G + + ++M+++ATD D +GK ++ YR++ N N + F+++P
Sbjct: 1085 TDNCFLGHVPENS-PADTSIMEMRATDLDDPKAGKNAILTYRIVQNVRNEINLNLFSINP 1143
Query: 69 ATEHQGPI---------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPY 107
T G I +D GGLS T T I ++D+ND P F Y
Sbjct: 1144 TT---GTIYTVLRSLDREVVDRYLVVVEARDGGGLSGTGTATIVISDVNDHPPVFTQRVY 1200
Query: 108 EFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANT----GDIRTNK 159
S+ E D V V ATD DEG+N+V+ +S+ ED F ++ + G +R K
Sbjct: 1201 MASMSENLDINSEVMVVAATDGDEGENSVMTFSIIGGDEDRKFFIETDKVNRRGIVRLKK 1260
Query: 160 ALDYEKQQLYLERVF 174
+D+EK ER F
Sbjct: 1261 KIDFEKPH---ERTF 1272
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 6/98 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+S TV + +TD+ND P F S YE +VPEG + G +V +V ATD D G + ++ Y +
Sbjct: 737 LASFTTVYVNITDVNDNVPFFMSSTYEATVPEGAEIGTSVAQVSATDLDSGLHGMINYII 796
Query: 141 PEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERV 173
+D F +++ TG I T D E++ YL V
Sbjct: 797 LKDQSGDSQFFSINSYTGIIHTRATFDREQKGSYLIEV 834
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 78/163 (47%), Gaps = 23/163 (14%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------ATEHQ 73
A+ + G +++V+A D D+G G V+Y ++ + A+ F ++P A
Sbjct: 446 ALVLENQPPGTFVLRVQAHDADTGVNGEVKYGIMQRD-GASPGFTINPDTGVISTAVSFD 504
Query: 74 GPIQDEGGLSSTAT------------VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAV 120
Q E LS TAT + + + D ND +P+F++ Y++ + E G +
Sbjct: 505 REKQREYTLSVTATDQAQEPLIGICQITVLIADQNDNDPKFENSRYQYFLREDTPVGTSF 564
Query: 121 GRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKAL 161
R A D D+G N+ + YS+ + P F ++ +TG I N+ +
Sbjct: 565 LRAAAHDDDQGTNSAITYSLSQQNPAYFHINPSTGWIYVNQPI 607
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVP----EGQ-DGLAVGRVHATDADEGQNAVV 136
LSS A V + + DIN+ P F + +SV E Q G V RV A DAD G N V
Sbjct: 416 LSSCAQVIVGINDINNNKPVFDEC-HNYSVNALVLENQPPGTFVLRVQAHDADTGVNGEV 474
Query: 137 YYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
Y + + F ++ +TG I T + D EKQ+ Y
Sbjct: 475 KYGIMQRDGASPGFTINPDTGVISTAVSFDREKQREY 511
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEF-SVPEGQ-DGLAVGRVHATDADEGQNAVVYY 138
GLS+ A V + +TD ND PEF Y +VPE G ++ +V A D D G NA + Y
Sbjct: 206 GLSNMAEVVVHITDENDCTPEFMHSIYSRDNVPETTPTGTSLLQVLARDCDTGLNAELSY 265
Query: 139 SVPEDIPFVVDANTGDIRTNKALDYEK-QQLYLERVFLISK 178
+ + + F + + G + ++ LDYE+ +Y V + K
Sbjct: 266 FI-QSVDFDITSQ-GVVSPSQRLDYERPNHMYECTVVAVDK 304
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 82/195 (42%), Gaps = 40/195 (20%)
Query: 18 FY--GAMARDKHELGVTLMQVKATDKDSGKFGLVEYR-----------LLDNN--TDAAS 62
FY G+M D +G + QV A D DSG+ G Y L+D + A
Sbjct: 1307 FYEAGSMFEDV-PVGTIVAQVTAMDLDSGQNGRFTYSIAPESDPFQQFLVDKSGWVVVAD 1365
Query: 63 YFNLDPATEHQGPI--QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
+ + +H+ I D G L+ +A V + V D+ND PEF++ PY V E + +
Sbjct: 1366 SLDREKVAQHRLMILATDMGSPALTGSAIVLVTVQDVNDNGPEFEA-PYRPIVWE--NTI 1422
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIPF----------VVDANTGDIRTNKAL------- 161
A +H D +A+ + PF V + N D+R A+
Sbjct: 1423 APQVIHMNDTSTLLHAIDRDTSSNGGPFSIRLLMLTSDVTNFNLTDMRNGSAMITALRSF 1482
Query: 162 DYEKQQLYLERVFLI 176
D E+Q+ YL + +I
Sbjct: 1483 DREQQKQYLLPILMI 1497
Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 81/192 (42%), Gaps = 45/192 (23%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDS------------GKFGLVEY------------RL 53
++ ++ + EL V +++V ATD D G+ E+ R
Sbjct: 979 YHASVMEELTELPVLVLEVSATDPDQEADQRAVRYSLHGQGAGSEFTIDEINGRIFAQRR 1038
Query: 54 LDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLP---YEFS 110
LD +A F L AT+ G GL+ A V + V DIND P F +
Sbjct: 1039 LDREVRSAWQF-LVLATDENG-----AGLTGFADVLVDVQDINDNAPVFLCATDNCFLGH 1092
Query: 111 VPEGQDG-LAVGRVHATDADE---GQNAVVYYSVPEDIP-------FVVDANTGDIRTN- 158
VPE ++ + ATD D+ G+NA++ Y + +++ F ++ TG I T
Sbjct: 1093 VPENSPADTSIMEMRATDLDDPKAGKNAILTYRIVQNVRNEINLNLFSINPTTGTIYTVL 1152
Query: 159 KALDYEKQQLYL 170
++LD E YL
Sbjct: 1153 RSLDREVVDRYL 1164
>gi|334325572|ref|XP_003340657.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-18-like [Monodelphis
domestica]
Length = 790
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 81/175 (46%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI ++D+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLSDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + Y++ I + G + K L+YEK++ Y
Sbjct: 289 KIKANDADTGSNADMKYTIINGDGIGVFSISTDKETREGILSLKKPLNYEKKKSY 343
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 50/109 (45%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 353 HLDFRFSHLGPFKD------VTMLKIIVGDV-DEPPLFSMPSYVMDVHENEKIGTVVGTV 405
Query: 124 HATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D + V Y+ +D F +DANTG I+T K LD E+ Y
Sbjct: 406 AAQDPDSANSLVRYFIDHHAEDDRFFNIDANTGTIKTAKVLDREETPWY 454
Score = 36.2 bits (82), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
Score = 36.2 bits (82), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 57/137 (41%), Gaps = 26/137 (18%)
Query: 25 DKHE---LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------E 71
D HE +G + V A D DS LV Y +D++ + +FN+D T
Sbjct: 391 DVHENEKIGTVVGTVAAQDPDSAN-SLVRY-FIDHHAEDDRFFNIDANTGTIKTAKVLDR 448
Query: 72 HQGPI---------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
+ P +D L S V IRV D+ND PE Y+ V E + G +
Sbjct: 449 EETPWYNITVAASEKDNPSLLSHVAVGIRVLDVNDNPPELAK-EYDIIVCENSKPGQVIH 507
Query: 122 RVHATDADEGQNAVVYY 138
+ ATD D+ N ++
Sbjct: 508 TISATDKDDFANGPRFH 524
>gi|326672579|ref|XP_002661146.2| PREDICTED: cadherin-12 [Danio rerio]
Length = 796
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPATE---- 71
Y A + +G +M+V ATD D +G V Y +L YF++DP T
Sbjct: 166 YTASVPEMSPVGTYVMKVTATDADDPTYGNSARVVYSILH----GQPYFSVDPKTGVIRT 221
Query: 72 ------------HQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
+Q IQ + GGL+ T T+NI ++D+ND P F + VPE
Sbjct: 222 ALPNMDREVKELYQVLIQAKDMGGQLGGLAGTTTINITLSDVNDNPPRFSKSIFHLRVPE 281
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYS-VPEDIPFVVDANT------GDIRTNKALDYEK 165
G AVGR+ A D D G+NA V Y+ VP D + D T G I K LDYE
Sbjct: 282 SSAVGSAVGRIKAHDLDIGKNAEVEYNIVPGDGGAMFDITTNEHNQEGIIMLKKPLDYET 341
Query: 166 QQLYLERV 173
++ Y +V
Sbjct: 342 KKAYTFKV 349
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY SVPE G V +V ATDAD+ G +A V YS+ P
Sbjct: 149 IKVQDINDNEPKFLEGPYTASVPEMSPVGTYVMKVTATDADDPTYGNSARVVYSILHGQP 208
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++LY
Sbjct: 209 YFSVDPKTGVIRTALPNMDREVKELY 234
>gi|348503351|ref|XP_003439228.1| PREDICTED: cadherin-12 [Oreochromis niloticus]
Length = 803
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + +G + QV ATD D +G V Y +L YF++DP T
Sbjct: 170 YTASVPEMSPVGTYVTQVTATDADDPTYGNSARVVYSILH----GQPYFSVDPKTGVIKT 225
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGL+ T T+NI ++D+ND P F + VPE
Sbjct: 226 ALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTTINITLSDVNDNPPRFSKSFFHLRVPE 285
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYS-VPEDIPFVVDANT------GDIRTNKALDYEK 165
G AVGR+ A D D G+NA V Y+ VP D + D T G I K LDYE
Sbjct: 286 SSAVGSAVGRIKAHDLDIGKNAEVEYTIVPGDGGAMFDITTNEHNQEGIIILRKPLDYET 345
Query: 166 QQLYLERV 173
++ Y +V
Sbjct: 346 KKAYTFKV 353
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY SVPE G V +V ATDAD+ G +A V YS+ P
Sbjct: 153 IKVQDINDNEPKFLEGPYTASVPEMSPVGTYVTQVTATDADDPTYGNSARVVYSILHGQP 212
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG I+T +D E ++ Y
Sbjct: 213 YFSVDPKTGVIKTALPNMDREVKEQY 238
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 68/179 (37%), Gaps = 33/179 (18%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL------------------------ 53
F+ + +G + ++KA D D GK VEY +
Sbjct: 278 FFHLRVPESSAVGSAVGRIKAHDLDIGKNAEVEYTIVPGDGGAMFDITTNEHNQEGIIIL 337
Query: 54 ---LDNNTDAASYFNLDPATEHQGP-IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF 109
LD T A F +D + H P Q G TATV I V D+ D+ P F Y
Sbjct: 338 RKPLDYETKKAYTFKVDASNAHLDPRFQSSGAFKDTATVKINVLDV-DEPPVFNKPSYVM 396
Query: 110 SVPEGQD-GLAVGRVHATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYE 164
V E G +G V A D D + V Y + D F +D G I TN+ LD E
Sbjct: 397 DVYEDTPAGTIIGAVTAQDLDASSSPVRYSIDWKTDLDSYFDIDPVEGTISTNELLDRE 455
Score = 36.2 bits (82), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G +AV Y E F +D TGDI ++LD E++ Y
Sbjct: 74 GSDPQYVGKLH-TDLDKGDSAVKYTLSGEGAGSIFTIDQTTGDIHALRSLDREEKPYYTL 132
Query: 172 R 172
R
Sbjct: 133 R 133
>gi|410956898|ref|XP_003985073.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Felis catus]
Length = 4915
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 75/164 (45%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F +DP + E +
Sbjct: 1724 GSKIMQLTAMDADEGANALVTYTIISGADDS---FRIDPESGDLIATKRLDRERRSKYSL 1780
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G SS +NI V+D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1781 LVRADDGLQSSDMRINITVSDVNDHTPKFSRPVYSFDIPEDTTPGSLVAAILATDDDSGV 1840
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG +ALDYE QQ Y+ V
Sbjct: 1841 NGEITYIVNEDDEDGIFFLNPVTGVFNLTRALDYEAQQYYILTV 1884
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 81/170 (47%), Gaps = 22/170 (12%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL+ Y + N + A + +
Sbjct: 3066 ATIPESHSIGAIVRTVSARDRDAAMNGLIRYSISSGNEEGIFAINSSTGILTLAKALDYE 3125
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
+H+ I D G ++ T +V + V D+ND +P F Y +V E G V
Sbjct: 3126 LCQKHEMTITATDGGWVARTGYCSVTVNVIDVNDNSPVFFPDEYFPTVLENAPSGTTVIH 3185
Query: 123 VHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y+V D+ FV+D NTG I T LD+E +Q Y
Sbjct: 3186 LNATDADSGTNAVIAYTVQSSDSDL-FVIDPNTGVITTQGFLDFETKQSY 3234
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 77/167 (46%), Gaps = 33/167 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------------------- 68
G L+ ++ATD+D G G V + L + TD S F LDP
Sbjct: 599 GTELLVLRATDRDLGDNGTVRFSLQEAETDQRS-FRLDPVSGRLSTVTSLDREEQAFYSL 657
Query: 69 ---ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVH 124
AT+ P Q SS A +N+ + D+ND +P F + Y + E + G + + V
Sbjct: 658 LVLATDLGSPPQ-----SSMARINVSLLDMNDNSPVFYPVQYFAHIQENEPGGSYITTVS 712
Query: 125 ATDADEGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ATD D G N V YS+ + F V+A +G I T ALD E++ Y
Sbjct: 713 ATDPDLGLNGTVKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAY 759
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 75/173 (43%), Gaps = 21/173 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN------TDAASY-------- 63
FY A + +++V A+D D G GL+ Y ++ N D+ S
Sbjct: 1214 FYQATISESAANLTQVLRVSASDVDEGNNGLIHYSVMKGNEERQFAIDSTSGQVTLIGKL 1273
Query: 64 -FNLDPATEHQGPIQDEGGLS--STATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
+ PA D G +S ST T+NI + D ND P F V E + G
Sbjct: 1274 DYEATPAYSLVIQAVDSGAISLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGEL 1333
Query: 120 VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD+D G NA ++YS+ F + NTG I K LD+E Q LY
Sbjct: 1334 VSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSIFLAKKLDFETQSLY 1386
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 74/168 (44%), Gaps = 22/168 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y + TD + F ++P+T
Sbjct: 2744 SQIFSAYVPENSPLGYTVTRVTTSDEDIGVNAISRYSI----TDTSLPFTINPSTGDIVI 2799
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V I VTD+ND P F Y PE + G
Sbjct: 2800 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPELTEIGS 2859
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
V +V ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 2860 KVTQVSATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQVLKYQN 2907
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 24/162 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V A DKDSG G ++Y +++ N + + F ++ AT I+
Sbjct: 2657 ILTVSAMDKDSGPNGQLDYEIVNGNKEHS--FTINHATGEIRSIRSLDREKISQYVLTIK 2714
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G S + +V I + D ND P F + + VPE G V RV +D D G
Sbjct: 2715 SSDKGSPSQSTSVKVIINILDENDNAPRFSQI-FSAYVPENSPLGYTVTRVTTSDEDIGV 2773
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA+ YS+ + +PF ++ +TGDI ++ L+ E Y RV
Sbjct: 2774 NAISRYSITDTSLPFTINPSTGDIVISRPLNREDTDRYRIRV 2815
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 73/158 (46%), Gaps = 22/158 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP---------------- 75
T++QV A D D G + Y L N D A F L + E Q
Sbjct: 2246 TILQVVARDDDQGPNSKLSYVLFGGNEDNA--FTLSASGELQVTQSLDRETKEHFVLMIT 2303
Query: 76 IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQ 132
D G L+ T T+N+ V D+ND P F S Y ++PE G V V+A+DAD
Sbjct: 2304 ATDSGSPALTGTGTINVIVDDVNDNVPTFASKMYFTTIPEDAPTGTDVLLVNASDADAST 2363
Query: 133 NAVVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
NAV+ Y + + F ++ +TG I T+ LD E ++ Y
Sbjct: 2364 NAVISYRIIGGNSQFTINPSTGQIITSALLDRETKENY 2401
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 38 ATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGGLSSTAT--- 87
ATD D G G+ YR++ N A F LD G + +GGL T
Sbjct: 159 ATDSDIGSNGVDHRSYRIIQGN--EAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQY 216
Query: 88 -------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
VN+ V DIND P F S Y+ VPE G +V +V A D
Sbjct: 217 QLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAAVGSSVLQVAAAD 276
Query: 128 ADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ADEG NA + Y + E PF +D TG I + LD+E ++ Y
Sbjct: 277 ADEGTNADIRYRLQDEGTPFQMDPETGLITVREPLDFEARRQY 319
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 71/157 (45%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +ATD DSG +EY LL+ + S +D G + D
Sbjct: 2037 VFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATD 2096
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y+ + E G + +V+A D DEG N
Sbjct: 2097 KGQPALSSSTEVVVMVLDINDNNPVFVQALYKVEINENTLTGTDIIQVYAADGDEGTNGQ 2156
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y + + + F +D+ TG I K LD EK Y
Sbjct: 2157 VRYGIVDGNANQEFRIDSVTGAITVAKPLDREKTPTY 2193
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 82/188 (43%), Gaps = 23/188 (12%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF---NLDPAT 70
D L Y + + +V+A DKDSG G + Y + + NT DA F L +
Sbjct: 997 DQLSYEVTLSESEPVNSRFFKVQAFDKDSGANGEIAYSIAEGNTGDAFGIFPDGQLYIKS 1056
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E +QD LS+T V + + D+ND P F S Y F E Q G
Sbjct: 1057 ELDRELQDRYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAG 1116
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLER---V 173
VG+V+A D D G N V YS P F + A +G+I + D ++ L +R V
Sbjct: 1117 SFVGKVNAIDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTRQFD--RESLMRQRGTAV 1174
Query: 174 FLISKFAT 181
F + AT
Sbjct: 1175 FSFTVIAT 1182
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 76/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3180 GTTVIHLNATDADSGTNAVIAYTVQSSDSD---LFVIDPNT---GVITTQGFLDFETKQS 3233
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S ATVNI++ N+ P F S Y F + E G VG V A+
Sbjct: 3234 YHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFAS 3293
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F ++ TG I + LD EK+ ERV L
Sbjct: 3294 DRDLGTDGEVHYLIFGNSRKKGFQINKKTGQIYVSGLLDREKE----ERVSL 3341
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L ATV++ + DIND P+F Y+ ++ E L V RV A+D DEG N +++YSV
Sbjct: 1190 LKDQATVHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSV 1249
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E+ F +D+ +G + LDYE Y
Sbjct: 1250 MKGNEERQFAIDSTSGQVTLIGKLDYEATPAY 1281
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 78/162 (48%), Gaps = 22/162 (13%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQGPI 76
++G L++V A D +D G VEY + LDN+T S + + +Q +
Sbjct: 2967 KVGTKLIKVTAVDDRDFGLNSEVEYLISNENHFGKFKLDNSTGWISVASSLISDLNQNFV 3026
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D+G LSS ATV I VT+ N PEF ++PE G V V A D
Sbjct: 3027 ITVTARDKGNPPLSSQATVQIIVTEENYHTPEFSQSHMSATIPESHSIGAIVRTVSARDR 3086
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQ 167
D N ++ YS+ E+ F ++++TG + KALDYE Q
Sbjct: 3087 DAAMNGLIRYSISSGNEEGIFAINSSTGILTLAKALDYELCQ 3128
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 27/165 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGPI--- 76
G ++QV A D D G G V Y ++D N A F +D P + P
Sbjct: 2138 GTDIIQVYAADGDEGTNGQVRYGIVDGN--ANQEFRIDSVTGAITVAKPLDREKTPTYSL 2195
Query: 77 ----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDA 128
D G + T+TV+I + DIND P F+ PY +VPE L + +V A D
Sbjct: 2196 TVQATDRGSNPRTDTSTVSIVLLDINDFVPMFELSPYSVNVPENLGTLPRTILQVVARDD 2255
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D+G N+ + Y + ED F + A +G+++ ++LD E ++ ++
Sbjct: 2256 DQGPNSKLSYVLFGGNEDNAFTLSA-SGELQVTQSLDRETKEHFV 2299
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 31/135 (22%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G ++ V A+D D+ ++ YR++ N S F ++P+T G I
Sbjct: 2348 GTDVLLVNASDADASTNAVISYRIIGGN----SQFTINPST---GQIITSALLDRETKEN 2400
Query: 77 -------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHA 125
D G LSS+A+V + VTD+ND P FQ PY +P G V V
Sbjct: 2401 YTLVVVSSDAGSPEPLSSSASVLVTVTDVNDNPPRFQHHPYVTHIPSPTPPGSFVFAVTV 2460
Query: 126 TDADEGQNAVVYYSV 140
TDAD G N+ ++YS+
Sbjct: 2461 TDADIGPNSELHYSL 2475
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 68/171 (39%), Gaps = 32/171 (18%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPATEHQGPIQ 77
+ + G ++ Q KA D D G G+V Y L N N + L P H G Q
Sbjct: 904 ENWQAGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFTINEKNGNISLLGPLDVHAGSYQ 963
Query: 78 DE--------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
E LSS+ + + V D+ND P F L YE ++ E + +V A D
Sbjct: 964 IEIVASDMGVPQLSSSFILTVYVHDVNDNPPVFDQLSYEVTLSESEPVNSRFFKVQAFDK 1023
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYL 170
D G N + YS+ E NTGD + LD E Q Y+
Sbjct: 1024 DSGANGEIAYSIAE-------GNTGDAFGIFPDGQLYIKSELDRELQDRYV 1067
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1692 AEVEITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTYTIISGA 1751
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ K LD E++ Y
Sbjct: 1752 DDSFRIDPESGDLIATKRLDRERRSKY 1778
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV- 140
LSS +++ V D+ND +P F+ P+ + E + V A D D G N + Y +
Sbjct: 2619 LSSYEKLDLTVLDVNDNSPVFKEDPFVSEILENLSPRKILTVSAMDKDSGPNGQLDYEIV 2678
Query: 141 --PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
++ F ++ TG+IR+ ++LD EK Y+
Sbjct: 2679 NGNKEHSFTINHATGEIRSIRSLDREKISQYV 2710
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 9/159 (5%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDE 79
G+++ +L + + T G F + + + AS + + + +Q +
Sbjct: 813 GSVSASTMDLNANISYLITTGDQKGMFAINQ---VTGQLTTASVIDREEQSFYQLKVVAS 869
Query: 80 GG-LSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVY 137
GG ++ VNI V D+ND +P F Q++ V Q G ++ + A D DEG N +V
Sbjct: 870 GGTVTGDTMVNITVKDLNDNSPHFLQAVESVNVVENWQAGHSIFQAKAVDPDEGVNGMVL 929
Query: 138 YSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
YS+ P+++ F ++ G+I LD +E V
Sbjct: 930 YSLKQNPKNL-FTINEKNGNISLLGPLDVHAGSYQIEIV 967
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 70/173 (40%), Gaps = 25/173 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNN----------TDAASYFNLDP 68
LG T++ TD D G + Y + +D N ++ S++NL
Sbjct: 1927 LGSTVLVFNVTDADDGINSQLAYSIASGDSLGQFTVDKNGVLKVLKSLDRESQSFYNL-V 1985
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
H P +STA V+I + D+ND P F S P +PE V + ATD
Sbjct: 1986 VQAHDLPQLPASRFTSTAHVSIILLDVNDNPPTFLS-PKLTYIPENTPIDTIVFKAQATD 2044
Query: 128 ADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
D G N+ + Y++ P F + G++R LD E+ Y V K
Sbjct: 2045 PDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATDK 2097
Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG + Y + N F++ P T E Q
Sbjct: 1329 RIGELVSSVTATDSDSGDNADLHYSITGTNNHGT--FSISPNTGSIFLAKKLDFETQSLY 1386
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G SST +V I V D ND P F S+ E G +V V A D
Sbjct: 1387 KLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVTAHD 1446
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + Y++ + +P F +D G I TN +D E L+
Sbjct: 1447 PDADINGQLSYTIIQQMPRGNHFGIDEVKGTIYTNAEIDREFANLF 1492
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 69/175 (39%), Gaps = 22/175 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G V+Y + + ++ LD
Sbjct: 694 YFAHIQENEPGGSYITTVSATDPDLGLNGTVKYSISAGDRSRFQVNAQSGVISTRMALDR 753
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V I V D D P F Y F V E G VG
Sbjct: 754 EEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAYSFVVFENVALGYHVG 813
Query: 122 RVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V A+ D NA + Y + + F ++ TG + T +D E+Q Y +V
Sbjct: 814 SVSASTMD--LNANISYLITTGDQKGMFAINQVTGQLTTASVIDREEQSFYQLKV 866
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV 140
SS A++ I V DIND P F Y ++ E G V V ATD D G NA + YS+
Sbjct: 456 SSVASLVIFVNDINDHPPVFAQQVYRVNLSEEAPPGSYVSGVSATDGDSGLNANLRYSI 514
>gi|344253926|gb|EGW10030.1| Cadherin EGF LAG seven-pass G-type receptor 2 [Cricetulus griseus]
Length = 2335
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 84/181 (46%), Gaps = 26/181 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS-YFNLDPAT---EHQG 74
Y R+ E+G ++ V+ATD D+ + YRLL+ + S F +DP + +G
Sbjct: 128 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGAGGSPSEVFEIDPRSGVIRTRG 187
Query: 75 PI------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D G SSTA V + V D ND P+F Y V E
Sbjct: 188 PVDREEVESYKLTVEASDQGRDPGPRSSTAAVFLSVEDDNDNAPQFSEKRYVVQVREDVT 247
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLER 172
G V RV A+D D+G NA+V+YS+ F +DA TG + LDYE + Y R
Sbjct: 248 PGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLR 307
Query: 173 V 173
+
Sbjct: 308 I 308
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-------------DAASYFN 65
Y R+ G +++V A+D+D G LV Y ++ N D S +
Sbjct: 238 YVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 297
Query: 66 LDPATEHQGPIQDEGG----LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
+ E+ I+ + G LS+ + V ++V DIND P F S P++ +V E G
Sbjct: 298 YETTKEYTLRIRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 357
Query: 120 VGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V A DAD G NA + YS V D PF ++ TG I LD E+ Y
Sbjct: 358 VLHVQAIDADAGDNARLEYSLAGVGHDFPFTINNGTGWISVAAELDREEVDFY 410
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------------AASYFNLDPATEHQ-- 73
+G +++ V A D+D+ ++ Y++ NT + LD E Q
Sbjct: 483 VGTSVVTVSAVDRDA--HSVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYV 540
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G TA + + VTD N P FQS Y +V E + G V + ATD D G
Sbjct: 541 LAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 600
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + IP F +DA+TG + T LDYE Q Y
Sbjct: 601 ENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSY 639
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 33/181 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPATE---- 71
Y A + G ++ ++A D D G+ G +EY L D+ ++ +F+LDP T
Sbjct: 20 YQATVPENQPAGTSVASLRAIDPDEGEAGRLEYTMDALFDSRSN--HFFSLDPITGTVTT 77
Query: 72 -------------HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ QD G S+ AT+ I VTD ND +P F+ Y+ S+ E +
Sbjct: 78 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 137
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV-------PEDIPFVVDANTGDIRTNKALDYEKQQL 168
G V V ATD D NA + Y + P ++ F +D +G IRT +D E+ +
Sbjct: 138 VGYEVLTVRATDGDAPPNANILYRLLEGAGGSPSEV-FEIDPRSGVIRTRGPVDREEVES 196
Query: 169 Y 169
Y
Sbjct: 197 Y 197
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLDPATEHQGPIQD- 78
+++Q+ ATD+DSG G V Y + + LD Q ++
Sbjct: 691 SVLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYILRAY 750
Query: 79 --EGGLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
+ G+ T V + V D+ND P F+ ++ V E GLAV RV ATD DEG
Sbjct: 751 AVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGT 810
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 811 NAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYEDRPEYI 851
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSSTA 86
G T++ + ATD+D+G+ + Y + D+ F +D A Q + E +S T
Sbjct: 586 GTTVVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTL 641
Query: 87 TVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
+ R V D+ND P+F Y+ SV E +V ++ ATD D
Sbjct: 642 AITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRD 701
Query: 130 EGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N V+Y+ D F+V++ +G +RT + LD E Y+ R + + K
Sbjct: 702 SGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYILRAYAVDK 754
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 79/197 (40%), Gaps = 47/197 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G+ + +V ATD D G + Y++++ N F LD + + D
Sbjct: 794 IGLAVARVTATDPDEGTNAQIMYQIVEGNI--PEVFQLDIFSGELTALVDLDYEDRPEYI 851
Query: 79 ------EGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRV 123
L S ATV++R+ D ND P + F S P G A+GRV
Sbjct: 852 LVIQATSAPLVSRATVHVRLLDRNDNPPVLGNFEILFNNYVTNRSSSFPGG----AIGRV 907
Query: 124 HATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK---------------QQ 167
A D D + + ++ V ++A TG++R ++ALD + ++
Sbjct: 908 PAHDPDISDSLTYSFERGNELSLVLLNATTGELRLSRALDNNRPLEAIMSVLVSEDLQER 967
Query: 168 LYLERVFLISKFATSYL 184
LYL R L + A L
Sbjct: 968 LYLNRSLLTAISAQRVL 984
Score = 38.9 bits (89), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 100 PEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV------PEDIPFVVDANT 152
P+FQ Y+ +VPE Q G +V + A D DEG+ + Y++ + F +D T
Sbjct: 13 PQFQPPSYQATVPENQPAGTSVASLRAIDPDEGEAGRLEYTMDALFDSRSNHFFSLDPIT 72
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G + T + LD E + ++ RV
Sbjct: 73 GTVTTAEELDRETKSTHVFRV 93
>gi|332211631|ref|XP_003254918.1| PREDICTED: protocadherin-16 [Nomascus leucogenys]
Length = 3297
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 84/162 (51%), Gaps = 28/162 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGP- 75
G +++V A D D G G V Y L+ + +F++DP + E Q
Sbjct: 488 GSFVVRVTARDPDQGTNGQVTYSLVPGAH--SHWFSIDPTSGIITTAASLDYELEPQPQL 545
Query: 76 --IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ +GGL +S+ATV++ + D+ND P+FQ Y S+PEG Q G +V ATDAD
Sbjct: 546 TVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDAD 605
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEK 165
G ++ YS+ + PF +DA++GD+ T + LD ++
Sbjct: 606 SGPFGLLSYSLGAGLGSSGSPPFRIDAHSGDVCTTRTLDRDQ 647
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 78/177 (44%), Gaps = 27/177 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + R+ G +L+ ++ATD D G G V Y + + + F+LDP T
Sbjct: 1653 YSVLLRENSPPGTSLLTLRATDPDVGANGQVTYGGVSSES-----FSLDPDTGVLTTLRA 1707
Query: 71 ---EHQGPI------QDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQDGLA 119
E Q I QD G V +RV D ND P F S VPEGQD
Sbjct: 1708 LDREEQEEINLTVYAQDRGSPPQLTHVTVRVAVEDENDHAPTFGSAHLSLEVPEGQDPQT 1767
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ + A+D D G N + Y + + P FV+D +G+ T + LD E + + R+
Sbjct: 1768 LTMLRASDPDVGANGQLQYRILDGDPSGAFVLDFTSGEFGTMRPLDREVEPAFQLRI 1824
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 21/147 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNT--DAASYFNLDPAT-----------EHQGPI 76
G + + A D D+G FG + Y LL+ + F L+ +T EH
Sbjct: 2721 GTLVTTLHAIDGDAGAFGRLRYSLLEAGPGPEGREAFALNSSTGELRARVPFDYEHTESF 2780
Query: 77 Q------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ D G LS++ TV++ VT ++ +P F + + F VPEG + G ++G V ATD D
Sbjct: 2781 RLLVGAADAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQVPEGARRGHSLGHVQATDED 2840
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDI 155
G + +V YS+ P F ++ TG +
Sbjct: 2841 GGADGLVLYSLATSSPYFGINQTTGAL 2867
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 28/167 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQ 73
+G L+ V+A+D D G GLV + + ++ D + F LD ++ HQ
Sbjct: 2616 VGAELLHVEASDADPGPHGLVRFTV--SSGDPSGLFELDESSGTLRLAHALDCETQARHQ 2673
Query: 74 GPIQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
+Q G + A V I V D+ND P F S+ E Q G V +HA D D
Sbjct: 2674 LVVQAADPAGAHFALAPVTIEVQDVNDHGPAFPLNLLSTSLAENQPPGTLVTTLHAIDGD 2733
Query: 130 EGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYEKQQLY 169
G + YS+ E P F ++++TG++R DYE + +
Sbjct: 2734 AGAFGRLRYSLLEAGPGPEGREAFALNSSTGELRARVPFDYEHTESF 2780
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 64/146 (43%), Gaps = 26/146 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY--------------RLLDNNTDAASY 63
FY A + + G +QV ATD DSG FGL+ Y R+ ++ D +
Sbjct: 581 FYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGSSGSPPFRIDAHSGDVCTT 640
Query: 64 FNLDPATEHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EG 114
LD QGP D GGL S V + ++D ND P+F Y S+ +
Sbjct: 641 RTLD---RDQGPSSFDFTVTAVDGGGLKSMVYVKVFLSDENDNPPQFYPREYAASISVQS 697
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV 140
G AV R+ A D D+G + + Y +
Sbjct: 698 PPGTAVLRLRAHDPDQGSHGRLSYHI 723
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN---------------LDPATEHQGPI 76
TL ++A+D D G G ++YR+LD + A + ++PA + +
Sbjct: 1767 TLTMLRASDPDVGANGQLQYRILDGDPSGAFVLDFTSGEFGTMRPLDREVEPAFQLRIEA 1826
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQN 133
+D G LS+T + + V D ND P F Y VPE G + ++ A D D G N
Sbjct: 1827 RDGGHPALSATLLLTVTVLDANDHAPAFPVPAYSVEVPEDVPAGTLLLQLQAHDPDAGAN 1886
Query: 134 AVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSYL 184
V Y + F+++ ++G++RT ALD E+ Y V + A L
Sbjct: 1887 GHVTYYLGAGTAGAFLLEPSSGELRTATALDREQCPSYTFSVSAVDGAAAGPL 1939
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 67/158 (42%), Gaps = 30/158 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPI--- 76
G L+Q++A D D+G G V Y L A F L+P++ Q P
Sbjct: 1870 GTLLLQLQAHDPDAGANGHVTYYL---GAGTAGAFLLEPSSGELRTATALDREQCPSYTF 1926
Query: 77 -------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-----GQDGLAVGRVH 124
G LS+T +V I V D+ND P F + P +P LA+ +
Sbjct: 1927 SVSAVDGAAAGPLSTTVSVTITVRDVNDHAPTFPTSPLRLRLPRPGPSFSTPTLALATLR 1986
Query: 125 ATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKA 160
A D D G NA + Y + P VD+ TG+IR ++
Sbjct: 1987 AEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARS 2024
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 73/167 (43%), Gaps = 32/167 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQ----- 73
G ++QV+A D G + Y L A+S F L+P + E Q
Sbjct: 1015 GTQVLQVQAQAPDGGP---ITYHLAAEG--ASSPFGLEPQSGWLWVRAALDREAQELYVL 1069
Query: 74 ------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
G + G + TATV + + + N+ +P P +V E Q G +VGRV AT
Sbjct: 1070 KVMAVSGSKAELGQQTGTATVRVSILNQNEHSPRLSEDPTFLAVAENQPPGTSVGRVFAT 1129
Query: 127 DADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
D D G N + YS+ + F + TG++ T + LD E+Q Y
Sbjct: 1130 DRDSGPNGRLTYSLQQLSEDSKAFRIHPQTGEVTTLQTLDREQQSSY 1176
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A +++ + DIND P F Y V E G V +V A+DAD G N V Y +
Sbjct: 238 ALLDVTLLDINDHAPAFNQSRYHAVVSESLGPGSPVLQVFASDADAGVNGAVTYEINRRQ 297
Query: 143 ---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D PF +DA+TG +R + LD+E+++++
Sbjct: 298 SEGDGPFFIDAHTGLLRLERPLDFEQRRVH 327
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 76/176 (43%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------P 68
Y A + G +++++A D D G G + Y +L N+ F LD P
Sbjct: 689 YAASISVQSPPGTAVLRLRAHDPDQGSHGRLSYHILAGNS--PPLFALDEQSGLLTVAWP 746
Query: 69 ATEHQGPI-------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGL 118
+ QD GGL + +A VNI + P F+ L Y FSVPE G
Sbjct: 747 LARRANSVVQLEIGAQDGGGLQAEPSARVNISIVPGTPTPPIFEQLQYVFSVPEDVAPGT 806
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
+VG V A + G+ A V S+ P F +DA +G ++T + LD E LE
Sbjct: 807 SVGIVQAHNP-PGRLAPVTLSLSGGDPRGLFSLDAVSGLLQTLRPLDRELLGPVLE 861
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 70/160 (43%), Gaps = 27/160 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYFN-LDP----------- 68
G + V A D D G+ V Y L L ++T A S LD
Sbjct: 1560 GPAALHVVARDPDLGEAARVSYWLASGGDGHFRLHSSTGALSVVRPLDREQRAEHVLTVV 1619
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
A++H P + S+T + + V D+ND+ P FQ Y + E G ++ + ATD
Sbjct: 1620 ASDHGSPPR-----SATQVLTVSVADVNDEAPTFQQQEYSVLLRENSPPGTSLLTLRATD 1674
Query: 128 ADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQ 167
D G N V Y F +D +TG + T +ALD E+Q+
Sbjct: 1675 PDVGANGQVTYGGVSSESFSLDPDTGVLTTLRALDREEQE 1714
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 78/172 (45%), Gaps = 35/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G ++ +V ATD+DSG G + Y L + D+ + F + P T E Q
Sbjct: 1120 GTSVGRVFATDRDSGPNGRLTYSLQQLSEDSKA-FRIHPQTGEVTTLQTLDREQQSSYQL 1178
Query: 76 ---IQDEGG--LSSTATVNIRVTDINDKNPEF--------QSLPYEF--SVPEGQDGLAV 120
+QD G S+T TV++ V D+ND +P F LP + VP G V
Sbjct: 1179 LVQVQDGGSPPRSTTGTVHVAVLDLNDNSPTFLQASGAAGGGLPIQVPDRVPPGT---LV 1235
Query: 121 GRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ A D DEG+N + Y++ P F + ++G++ T L ++ Y+
Sbjct: 1236 TTLQAKDPDEGENGTILYTLTGPGSELFSLHPHSGELLTAAPLIRAERPHYV 1287
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 70/172 (40%), Gaps = 29/172 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH----------QGPI--- 76
G + ++A D DSG V + LL A F +DP H GP
Sbjct: 909 GTPIYTLRALDPDSGVNSRVTFTLLAGGGGA---FTVDPTAGHVRLMRPLGPSGGPAHEL 965
Query: 77 ----QDEGGLSSTATVNIRVT--DINDKN--PEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D G T+ +RV D+ + P F S Y +P G G V +V A
Sbjct: 966 ELEARDGGSPPRTSHFRLRVVVQDVGTRGLAPRFNSPTYRVDLPSGTTAGTQVLQVQAQA 1025
Query: 128 ADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D G + Y+ E PF ++ +G + ALD E Q+LY+ +V +S
Sbjct: 1026 PDGGP--ITYHLAAEGASSPFGLEPQSGWLWVRAALDREAQELYVLKVMAVS 1075
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 65/147 (44%), Gaps = 28/147 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------- 68
Y M + G ++ V ATD+DSG G + Y L AS F++DP
Sbjct: 2379 LYQVMLLEHTPPGSAILSVSATDRDSGANGHISYHL----ASPASGFSVDPNNGTLFTIV 2434
Query: 69 ---ATEHQGP--------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG- 114
A H G +D G G ++ ATV++++ D ND P F Y +V E
Sbjct: 2435 GTVALGHDGSGAVDVVLEARDHGAPGRAARATVHVQLQDQNDHAPSFTLPHYHVAVTEDL 2494
Query: 115 QDGLAVGRVHATDADEGQ-NAVVYYSV 140
G + + ATDAD + +A V YS+
Sbjct: 2495 PPGSTLLTLEATDADGSRTHAAVDYSI 2521
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 70/180 (38%), Gaps = 39/180 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + L L+QV+A D D G G + Y L + A F++DP
Sbjct: 2175 YVAFLPESRPLEGPLLQVEADDLDQGSGGQISYSLAASQP-ARGLFHVDPTTGTITTTAI 2233
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
AT+ P L +AT+ + V D ND P P+E V E
Sbjct: 2234 LDREIWAETRLVLMATDRGSP-----ALVGSATLTVMVIDTNDNRPTIPQ-PWELRVSED 2287
Query: 114 GQDGLAVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + +V D D G V++Y S P+D PF V G + LD+E+ Y
Sbjct: 2288 ALLGSEIAQVTGNDVDSG--PVLWYVLSPSGPQD-PFSVGRYGGRVSLTGPLDFEQCDRY 2344
Score = 42.7 bits (99), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 21/96 (21%)
Query: 82 LSSTATVNIRVTDINDKNPEF-------QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
L + A + VTD+ND P F + LP E ++P G V RV A D D+G N
Sbjct: 451 LRAEAAFVLHVTDVNDNAPAFDHHLYRPEPLP-EVALP----GSFVVRVTARDPDQGTNG 505
Query: 135 VVYYSVPEDIP------FVVDANTGDIRTNKALDYE 164
V YS+ +P F +D +G I T +LDYE
Sbjct: 506 QVTYSL---VPGAHSHWFSIDPTSGIITTAASLDYE 538
Score = 42.7 bits (99), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 72/178 (40%), Gaps = 40/178 (22%)
Query: 30 GVTLMQVKATDKDSGK-FGLVEYRLLDNNTDAASYFNLDP----ATEHQGPIQDEGGL-- 82
G TL+ ++ATD D + V+Y ++ N F L+P A E GP G
Sbjct: 2497 GSTLLTLEATDADGSRTHAAVDYSIISGNW--GRVFQLEPRLAEAGESAGPGPRALGCLV 2554
Query: 83 ---------------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
SS V + V D+ND P F Y +VPE
Sbjct: 2555 LLEPLDFESLTQYNLTVAAADRGQPPQSSVVPVTVTVLDVNDNPPVFTRASYRVAVPEDT 2614
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
G + V A+DAD G + +V ++V P F +D ++G +R ALD E Q +
Sbjct: 2615 PVGAELLHVEASDADPGPHGLVRFTVSSGDPSGLFELDESSGTLRLAHALDCETQARH 2672
Score = 38.9 bits (89), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD-EGQNAVVYYSVPEDIP 145
V +RV D N+ P F P ++PE + G A+ A+DAD G N+ V Y + P
Sbjct: 1421 VQVRVQDENEHAPAFARDPLALALPENPEPGAALYTFRASDADGPGPNSDVRYRLLRQEP 1480
Query: 146 FV----VDANTGDIRTNKALDYEKQQLYL 170
V +DA TG + + LD E L
Sbjct: 1481 PVPALRLDARTGALSAPRGLDRETTPALL 1509
>gi|300798056|ref|NP_001178039.1| cadherin EGF LAG seven-pass G-type receptor 2 precursor [Rattus
norvegicus]
gi|149025694|gb|EDL81937.1| rCG28504 [Rattus norvegicus]
Length = 2919
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 84/181 (46%), Gaps = 26/181 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS-YFNLDPAT---EHQG 74
Y R+ E+G ++ V+ATD D+ + YRLL+ + S F +DP + +G
Sbjct: 294 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEVFEIDPRSGVIRTRG 353
Query: 75 PI------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D G SSTA V + V D ND P+F Y V E
Sbjct: 354 PVDREEVESYKLIVEASDQGRDPGPRSSTAVVFLSVEDDNDNAPQFSEKRYVVQVREDVT 413
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLER 172
G V RV A+D D+G NA+V+YS+ F +DA TG + LDYE + Y R
Sbjct: 414 PGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLR 473
Query: 173 V 173
+
Sbjct: 474 I 474
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 79/173 (45%), Gaps = 22/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-------------DAASYFN 65
Y R+ G +++V A+D+D G LV Y ++ N D S +
Sbjct: 404 YVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 463
Query: 66 LDPATEHQGPIQDEGG----LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
+ E+ I+ + G LS+ + V ++V DIND P F S P++ +V E G
Sbjct: 464 YETTKEYTLRIRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 523
Query: 120 VGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V A DAD G+NA + YS V D PF ++ TG I LD E+ Y
Sbjct: 524 VLHVQAIDADAGENARLEYSLAGVGHDFPFTINNGTGWISVAAELDREEVDFY 576
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------------AASYFNLDPATEHQ-- 73
+G +++ V A D+D+ ++ Y++ NT + LD E Q
Sbjct: 625 VGTSVVTVSAVDRDA--HSVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYV 682
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G TA + + VTD N P FQS Y +V E + G V + ATD D G
Sbjct: 683 LAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 742
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + IP F +DA+TG + T LDYE Q Y
Sbjct: 743 ENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSY 781
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 33/181 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPATE---- 71
Y A + G ++ ++A D D G+ G +EY L D+ ++ +F+LDP T
Sbjct: 186 YQATVPENQPAGTSVASLRAIDPDEGEAGRLEYTMDALFDSRSN--HFFSLDPITGAVTT 243
Query: 72 -------------HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ QD G S+ AT+ I VTD ND +P F+ Y+ S+ E +
Sbjct: 244 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 303
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV-------PEDIPFVVDANTGDIRTNKALDYEKQQL 168
G V V ATD D NA + Y + P ++ F +D +G IRT +D E+ +
Sbjct: 304 VGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEV-FEIDPRSGVIRTRGPVDREEVES 362
Query: 169 Y 169
Y
Sbjct: 363 Y 363
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLDPATEHQGPIQD- 78
+++Q+ ATD+DSG G V Y + + LD Q ++
Sbjct: 833 SVLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYILRAY 892
Query: 79 --EGGLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
+ G+ T V + V D+ND P F+ ++ V E GLAV RV ATD DEG
Sbjct: 893 AVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGT 952
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 953 NAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYEDRPEYI 993
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSSTA 86
G T++ + ATD+D+G+ + Y + D+ F +D A Q + E +S T
Sbjct: 728 GTTVVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTL 783
Query: 87 TVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
+ R V D+ND P+F Y+ SV E +V ++ ATD D
Sbjct: 784 AITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRD 843
Query: 130 EGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N V+Y+ D F+V++ +G +RT + LD E Y+ R + + K
Sbjct: 844 SGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYILRAYAVDK 896
Score = 42.7 bits (99), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 32/163 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G+ + +V ATD D G + Y++++ N F LD + + D
Sbjct: 936 IGLAVARVTATDPDEGTNAQIMYQIVEGNI--PEVFQLDIFSGELTALVDLDYEDRPEYI 993
Query: 79 ------EGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRV 123
L S ATV++R+ D ND P + F S P G A+GRV
Sbjct: 994 LVIQATSAPLVSRATVHVRLLDRNDNPPVLGNFEILFNNYVTNRSSSFPGG----AIGRV 1049
Query: 124 HATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
A D D + + ++ V ++A+TG++R ++ALD +
Sbjct: 1050 PAHDPDISDSLTYSFERGNELSLVLLNASTGELRLSRALDNNR 1092
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 100 PEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV------PEDIPFVVDANT 152
P+FQ Y+ +VPE Q G +V + A D DEG+ + Y++ + F +D T
Sbjct: 179 PQFQPPSYQATVPENQPAGTSVASLRAIDPDEGEAGRLEYTMDALFDSRSNHFFSLDPIT 238
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G + T + LD E + ++ RV
Sbjct: 239 GAVTTAEELDRETKSTHVFRV 259
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 32/136 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASY-------------FN 65
LG ++ V+A D D+G+ +EY L ++N T S F
Sbjct: 520 LGYLVLHVQAIDADAGENARLEYSLAGVGHDFPFTINNGTGWISVAAELDREEVDFYSFG 579
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
++ A +H P L+++A+V++ + D+ND NP F Y + E G +V V
Sbjct: 580 VE-ARDHGTP-----ALTASASVSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVS 633
Query: 125 ATDADEGQNAVVYYSV 140
A D D ++V+ Y +
Sbjct: 634 AVDRD--AHSVITYQI 647
>gi|432103917|gb|ELK30750.1| Cadherin EGF LAG seven-pass G-type receptor 2 [Myotis davidii]
Length = 2668
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 85/181 (46%), Gaps = 26/181 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS-YFNLDPAT---EHQG 74
Y R+ E+G ++ V+ATD D+ + YRLL+ + S F +DP + +G
Sbjct: 75 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSDVFEIDPRSGVIRTRG 134
Query: 75 PI------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D G S+TA+V + V D ND P+F Y V E
Sbjct: 135 PVDREEVESYQLTVEASDQGRDPGPRSATASVFLSVEDDNDNAPQFSEKRYVVQVREDVA 194
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLER 172
G V RV A+D D+G NA+V+YS+ F +DA TG + LDYE + Y R
Sbjct: 195 PGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLR 254
Query: 173 V 173
V
Sbjct: 255 V 255
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LD 67
Y R+ G +++V A+D+D G LV Y ++ N Y + LD
Sbjct: 185 YVVQVREDVAPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 244
Query: 68 PATEHQGPIQ---DEGG---LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
T + ++ +GG LS+ + V ++V DIND P F S P++ +V E G
Sbjct: 245 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 304
Query: 120 VGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V A DAD G NA + Y V D PF ++ TG I LD E+ Y
Sbjct: 305 VLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFY 357
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------------AASYFNLDPATEHQ-- 73
+G +++ V A D+D+ ++ Y++ NT + LD E Q
Sbjct: 406 VGTSVVTVSAVDRDA--HSVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYV 463
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G TA V + VTD N P FQS Y +V E + G V + ATD D G
Sbjct: 464 LAVTASDGTRQDTAQVVVNVTDANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 523
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + IP F +DA+TG + T LDYE Q Y
Sbjct: 524 ENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSY 562
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLDPATEHQGPIQD- 78
+++Q+ ATD+DSG G V Y + + LD Q ++
Sbjct: 614 SVLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAY 673
Query: 79 --EGGLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
+ G+ T V + V D+ND P F+ ++ V E GLAV RV ATD DEG
Sbjct: 674 AVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGT 733
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 734 NAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYEDRPEYV 774
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSSTA 86
G T++ + ATD+D+G+ + Y + D+ F +D A Q + E +S T
Sbjct: 509 GTTVVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTL 564
Query: 87 TVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
+ R V D+ND P+F Y+ S+ E +V ++ ATD D
Sbjct: 565 AITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSIYEDAPPFTSVLQISATDRD 624
Query: 130 EGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N V+Y+ D F+V++ +G +RT + LD E Y+ R + + K
Sbjct: 625 SGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYAVDK 677
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 15/124 (12%)
Query: 54 LDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
LD T + F + A +H P + S+ AT+ I VTD ND +P F+ Y+ S+ E
Sbjct: 28 LDRETKSTHVFRVT-AQDHGMPRR-----SALATLTILVTDTNDHDPVFEQQEYKESLRE 81
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYSV-------PEDIPFVVDANTGDIRTNKALDYEK 165
+ G V V ATD D NA + Y + P D+ F +D +G IRT +D E+
Sbjct: 82 NLEVGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSDV-FEIDPRSGVIRTRGPVDREE 140
Query: 166 QQLY 169
+ Y
Sbjct: 141 VESY 144
Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 32/163 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G+ + +V ATD D G + Y++++ N F LD + + D
Sbjct: 717 IGLAVARVTATDPDEGTNAQIMYQIVEGNI--PEVFQLDIFSGELTALVDLDYEDRPEYV 774
Query: 79 ------EGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRV 123
L S ATV++R+ D ND P + F S P G A+GRV
Sbjct: 775 LVIQATSAPLVSRATVHVRLLDRNDNPPVLGNFEILFNNYVTNRSSSFPGG----AIGRV 830
Query: 124 HATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
A D D + + ++ V ++A+TG++R ++ALD +
Sbjct: 831 PAHDPDVSDSLTYSFERGNELSLVLLNASTGELRLSRALDNNR 873
Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 32/136 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASY-------------FN 65
LG ++ V+A D D+G +EYRL ++N T S F
Sbjct: 301 LGYLVLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFYSFG 360
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
++ A +H P L+++A+V++ + D+ND NP F Y + E G +V V
Sbjct: 361 VE-ARDHGTP-----ALTASASVSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVS 414
Query: 125 ATDADEGQNAVVYYSV 140
A D D ++V+ Y +
Sbjct: 415 AVDRD--AHSVITYQI 428
>gi|348524542|ref|XP_003449782.1| PREDICTED: protocadherin-23-like [Oreochromis niloticus]
Length = 3262
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 84/174 (48%), Gaps = 21/174 (12%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LDPA 69
A + E+G L A D D G+ G+V + ++ N LD
Sbjct: 1522 AQVMEDAEVGSLLHHFVAIDGDQGENGIVSFSIISGNKKGLFTLEEKTGLLLLTAPLDYE 1581
Query: 70 TE--HQGPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR 122
TE H+ ++ D+G LSST T+ + V D+ND+ P F Y +V E +D G V R
Sbjct: 1582 TERFHRLTVRALDQGLPSLSSTQTLTVEVGDVNDQAPVFSQAIYTATVAENRDPGEPVIR 1641
Query: 123 VHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V ATD D +NAVV+YS+ P F ++ TG I T LD E+QQ + RV
Sbjct: 1642 VSATDEDSEENAVVWYSLLPGPGYELFSINPYTGLITTTSYLDREQQQHFTLRV 1695
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 79/162 (48%), Gaps = 24/162 (14%)
Query: 36 VKATDKDSGKFGLVEYRLLDN------NTDAASYFN---LDPATEHQGPIQ----DEGG- 81
VKA DKDSGK G + Y LL + NT N LD Q ++ D+G
Sbjct: 1108 VKAVDKDSGKNGQLSYLLLSDGKFFRINTKTGEIINWVALDREQYSQHSLKVMVTDQGHP 1167
Query: 82 -LSSTATVNIRVTDINDKNPEFQSLP----YEFSVPEG-QDGLAVGRVHATDADEGQNAV 135
L++TATV+I + DIND P+F LP + G Q G V + A D D G+N
Sbjct: 1168 RLNATATVHILIADINDNAPQFTHLPASKELNVQIWAGLQSGSLVTNMFAKDLDAGENGT 1227
Query: 136 VYYS-VPEDI---PFVVDANTGDIRTNKALDYEKQQLYLERV 173
V +S V ED F +D+ TGDIRT + + + Y +V
Sbjct: 1228 VIHSLVTEDDDLGHFEIDSKTGDIRTTELFSQDAKPYYTLKV 1269
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 83/177 (46%), Gaps = 30/177 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + + G +++V ATD+DS + +V Y LL F+++P T
Sbjct: 1624 IYTATVAENRDPGEPVIRVSATDEDSEENAVVWYSLLPG--PGYELFSINPYTGLITTTS 1681
Query: 71 -------EH-----QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
+H Q LSST TV V D ND PEF + S+PE L
Sbjct: 1682 YLDREQQQHFTLRVQARDSSARPLSSTTTVMCSVLDDNDNPPEFMQSSFRISLPEN---L 1738
Query: 119 AVGRVH---ATDADEGQNAVVYYSV-PEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
A G +H A+D D G+N ++YS+ ED F ++++TG I T + LD E+ Q Y
Sbjct: 1739 APGVIHTAQASDPDHGENGTIHYSILGEDYRGRFTINSHTGAISTTQVLDREETQNY 1795
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 76/163 (46%), Gaps = 23/163 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN---------------LDPATEHQGPIQ 77
+MQV A+D DSG G +EY +L N + A + + P+ +
Sbjct: 2158 IMQVFASDADSGMNGQIEYSILSGNLNGAFILDSVRGILATNVLLDREITPSYKLVLQAA 2217
Query: 78 DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAV 135
D G LSSTATV ++V D+ND +P + G V +V A D D ++
Sbjct: 2218 DRGNPPLSSTATVRVQVVDVNDNSPAIPPMEPVLITENLPAGYMVTQVTANDVD--LSST 2275
Query: 136 VYYSVPED----IPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
+ YS ++ IPF +D TG I +ALDYE+Q Y V+
Sbjct: 2276 ITYSFSDNSSTNIPFAIDRYTGVITLTRALDYEEQTEYTLTVW 2318
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 75/157 (47%), Gaps = 21/157 (13%)
Query: 37 KATDKDSGKFGLVEYRLL----------DNNTDAASYFNLDPATEHQG-----PIQDEGG 81
+A+D D G+ G + Y +L +++T A S + E Q +D G
Sbjct: 1747 QASDPDHGENGTIHYSILGEDYRGRFTINSHTGAISTTQVLDREETQNYTLTIQARDYGP 1806
Query: 82 --LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYY 138
LSS +++ + D ND P F Y S+ EG G V RV A D DEG N V Y
Sbjct: 1807 TPLSSFTQLHLVLLDQNDNIPSFTRKSYHASISEGLAAGAEVLRVSALDPDEGSNGEVTY 1866
Query: 139 SVPEDI---PFVVDANTGDIRTNKALDYEKQQLYLER 172
S+ +D F++DA TG IRT ++LD E + Y R
Sbjct: 1867 SLTDDNSQGAFLIDAFTGAIRTTRSLDRESRAQYSLR 1903
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 29/165 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +L+Q +A D D G V Y +L +N D S ++DP + E Q I
Sbjct: 467 GSSLIQFQARDADEGANSEVRYSILKSNQD--SLIDIDPESGLVTTAAALDRETQMEIWF 524
Query: 78 -------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
E LSSTATV + V D+ND P F+ Y S+ E D G +V ATDAD
Sbjct: 525 LVVAVDGGEPALSSTATVTVLVEDVNDNEPVFEQQLYNVSILEQSDVGSCFLQVAATDAD 584
Query: 130 EGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYEKQQ 167
+ + YS+ + F ++ +TG++ ++ +D + Q
Sbjct: 585 SPEFGTLLYSLSDGFDKQATHPLFQINPHTGELCVSQDIDRDTGQ 629
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 72/171 (42%), Gaps = 37/171 (21%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--FNLDPATEHQGP 75
Y ++ ++G +QV ATD DS +FG + Y L D A++ F ++P H G
Sbjct: 560 LYNVSILEQSDVGSCFLQVAATDADSPEFGTLLYSLSDGFDKQATHPLFQINP---HTGE 616
Query: 76 I---------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PE 113
+ +D GGLS+ V+I + D+ND P F Y S+
Sbjct: 617 LCVSQDIDRDTGQTVHDILIKAEDPGGLSAQTYVHIEIEDLNDNAPVFSPEEYAVSISSH 676
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYE 164
Q G + V ATD D G+ V Y D GD+ T ALD +
Sbjct: 677 AQPGTEIVIVIATDRDSGRFGQVTY----------DLLPGDMSTLFALDKQ 717
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 75/187 (40%), Gaps = 38/187 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA--------- 69
Y A + +LG L+QV A D D G GLV Y ++ N+ + LDP
Sbjct: 2570 YHAQVSENSQLGTKLVQVSAHDPDLGTNGLVRYDIISGNSKG--HLKLDPQSGLLVVNNS 2627
Query: 70 ------TEHQGPIQ-DEGGLSST------ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+++ I+ +GG SS V I V D ND P F SV E
Sbjct: 2628 LDYEKDSKYILTIRASDGGKSSENHKVAFTIVFITVLDENDNTPYFMFPTVNCSVLENLP 2687
Query: 117 GLA-VGRVHATDADEGQNAVVYYSV------------PEDI-PFVVDANTGDIRTNKALD 162
V VHA D D G + YSV PE F +D TGDI T + D
Sbjct: 2688 AFTHVCSVHAVDNDLGPYGQLTYSVMSSCFMNYGSGNPERKEAFAIDPLTGDIHTRQTFD 2747
Query: 163 YEKQQLY 169
YE++ Y
Sbjct: 2748 YERESEY 2754
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LD 67
Y A + G +++V A D D G G V Y L D+N+ A + LD
Sbjct: 1834 YHASISEGLAAGAEVLRVSALDPDEGSNGEVTYSLTDDNSQGAFLIDAFTGAIRTTRSLD 1893
Query: 68 PATEHQGPIQ-------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLA 119
+ Q ++ +G LSS A+V I+V D+ND P + P+ V
Sbjct: 1894 RESRAQYSLRAVATDGCTQGPLSSLASVTIQVEDVNDNMPVCEQTPFNAWVSMRTLPNQI 1953
Query: 120 VGRVHATDADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNK 159
V V ATD D+G+N ++Y++ E+ F ++ TG+I +
Sbjct: 1954 VTTVTATDRDQGENGTIHYALSDEENLFDINTETGEISLRR 1994
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 66/139 (47%), Gaps = 10/139 (7%)
Query: 46 FGLVEYRLLDNNTDAASYFNLDPATE---HQGPIQDEGGLSST---ATVNIRVTDINDKN 99
F LV +R+ NLD TE H + E LS+T ATV + V DIND
Sbjct: 1024 FPLVPFRIHPKTGWLYLSANLDYETESKYHFRVLATEAALSNTTAMATVTVLVLDINDNA 1083
Query: 100 PEFQSLPYEFSVPEGQD--GLAVGRVHATDADEGQNAVVYYSVPEDIPFV-VDANTGDIR 156
P F Y F+V EG GL VG V A D D G+N + Y + D F ++ TG+I
Sbjct: 1084 PVFSRDVYYFTVLEGSSPQGL-VGTVKAVDKDSGKNGQLSYLLLSDGKFFRINTKTGEII 1142
Query: 157 TNKALDYEKQQLYLERVFL 175
ALD E+ + +V +
Sbjct: 1143 NWVALDREQYSQHSLKVMV 1161
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 73/163 (44%), Gaps = 32/163 (19%)
Query: 38 ATDKDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQ--GPIQD------- 78
A D+D G+FG YR+ LD + + ++ +LD + QD
Sbjct: 147 AKDQDEGEFGTQGYRITESEMSDLFHLDYRSGSENHLSLDLVLNSKLDREAQDLYTLTIE 206
Query: 79 --EGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDADEGQ 132
+GG+ + T VNI V D ND P F Y SV E + AV +V ATD D G
Sbjct: 207 AFDGGIPARTGTLQVNIHVLDENDNPPVFNQTEYHTSVREDAPIMSAVCQVQATDYDLGD 266
Query: 133 NAVVYYSV------PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
N + Y + P ++ F ++ TG + NK LD+E Q +
Sbjct: 267 NGRLTYEINRRQSDPSEV-FSINETTGVVYLNKPLDFETQAFH 308
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 31/174 (17%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
S Y A ++ G + +V+A ++ S + + Y + N + N H G
Sbjct: 2038 SKVYNASVKENSRAGTWIAKVEANEQSSSR-QRITYTIFSGNENQVFSIN-----RHTGE 2091
Query: 76 IQ---------------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
I+ D G ++ V+I + DIND P+F+ Y +V EG
Sbjct: 2092 IRVQKDNSLDFEVNPHIQLVVLADSGLQTAHCRVSITLVDINDNAPQFEHSSYRTAVWEG 2151
Query: 115 Q-DGLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYE 164
Q + +V A+DAD G N + YS+ + F++D+ G + TN LD E
Sbjct: 2152 QVHNTYIMQVFASDADSGMNGQIEYSILSGNLNGAFILDSVRGILATNVLLDRE 2205
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 65/146 (44%), Gaps = 12/146 (8%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATV 88
L V ++Q++ K+ GK LV LD T + + + P L+S+ V
Sbjct: 2500 LEVKMVQIENQIKNVGK--LVLCNALDRETTESYALTVSVSDRGMPP------LNSSTVV 2551
Query: 89 NIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP-- 145
+ VTD ND P F S Y V E Q G + +V A D D G N +V Y +
Sbjct: 2552 MVTVTDCNDNAPVFSSTEYHAQVSENSQLGTKLVQVSAHDPDLGTNGLVRYDIISGNSKG 2611
Query: 146 -FVVDANTGDIRTNKALDYEKQQLYL 170
+D +G + N +LDYEK Y+
Sbjct: 2612 HLKLDPQSGLLVVNNSLDYEKDSKYI 2637
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV 140
LSS ++V+D+ND P F+ Y S+ E G ++ + A DADEG N+ V YS+
Sbjct: 431 LSSETVFLLKVSDMNDCYPVFEKDAYLISISEDAPQGSSLIQFQARDADEGANSEVRYSI 490
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
+D +D +G + T ALD E Q +E FL+
Sbjct: 491 LKSNQDSLIDIDPESGLVTTAAALDRETQ---MEIWFLV 526
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVV 136
D + ST VNI V D+ND P F +V + + G + HA D D G N V
Sbjct: 848 DASPVYSTTQVNITVADVNDNAPIFPKHSDTITVSQNTRPGTVLFIAHAHDYDSGANGRV 907
Query: 137 YYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y + ++ FV+D N G + N++L+ + QQ Y
Sbjct: 908 QYYLKSRKNGVFVIDRNLGTVTLNESLEMDHQQGY 942
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 26/140 (18%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDN--------NTDAASYFNLDPAT-----------EHQ 73
+ V A D D G +G + Y ++ + N + F +DP T E +
Sbjct: 2692 VCSVHAVDNDLGPYGQLTYSVMSSCFMNYGSGNPERKEAFAIDPLTGDIHTRQTFDYERE 2751
Query: 74 GP------IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHAT 126
+D+G ++T V + + +++ +P F Y F +PE + G VG V A
Sbjct: 2752 SEYCFIVEARDKGDKAATVRVQVNIKGVDEFSPVFTQKQYHFLLPENIKPGDTVGYVMAM 2811
Query: 127 DADEGQNAVVYYSVPEDIPF 146
D D G + VV YS+ PF
Sbjct: 2812 DHDGGVDGVVEYSLVNSSPF 2831
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 72/174 (41%), Gaps = 33/174 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNN-----------TDAASYFNLDPA 69
G L A D DSG G V+Y L +D N D +NL+
Sbjct: 888 GTVLFIAHAHDYDSGANGRVQYYLKSRKNGVFVIDRNLGTVTLNESLEMDHQQGYNLEIV 947
Query: 70 TEHQGPIQDEGGLSSTATVNIRVTDINDKNP-EFQSLPYEFSVPEG--QDGLAVG-RVHA 125
+ +G E LSST T+++ V ++ F++L Y + EG +D + R H
Sbjct: 948 AKDEG----EPSLSSTLTLSVNVDRTTAEDSLAFETLIYHVEIGEGYRKDARVIQVRAHR 1003
Query: 126 TDADEGQNAVVYYSVPED-----IPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
T N+ + YS+ + +PF + TG + + LDYE + Y RV
Sbjct: 1004 TRGGHISNSGIVYSLEGEPGFPLVPFRIHPKTGWLYLSANLDYETESKYHFRVL 1057
Score = 35.8 bits (81), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPED 143
++ T + + D+ND P F S + + + G + A D D+G+N +V +S+
Sbjct: 1498 ASVTAQLFLLDVNDNRPVFVSADTAQVMEDAEVGSLLHHFVAIDGDQGENGIVSFSIISG 1557
Query: 144 IP---FVVDANTGDIRTNKALDYEKQQLY 169
F ++ TG + LDYE ++ +
Sbjct: 1558 NKKGLFTLEEKTGLLLLTAPLDYETERFH 1586
>gi|432864259|ref|XP_004070252.1| PREDICTED: neural-cadherin-like [Oryzias latipes]
Length = 3342
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 84/185 (45%), Gaps = 31/185 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA------ 69
S Y A + ++G +++QV A DKD G G + Y LL++++ F +DP
Sbjct: 1778 SSIYEASVTEGAQVGTSVLQVSAHDKDLGLNGEITYSLLNDSSGDHRLFRIDPKYGVIFT 1837
Query: 70 ---------TEHQGPIQDEGGLSS------------TATVNIRVTDINDKNPEFQSLPYE 108
+ + +Q E G S TA V + ++D+ND P F YE
Sbjct: 1838 EAVFDREARSSYLLEVQSEDGEESARPGKNKQPNTDTAYVRVFISDVNDNKPVFAQRLYE 1897
Query: 109 FSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYE 164
V E D GLAV V A+D DEG N + Y + + F ++ G I + LDYE
Sbjct: 1898 VGVDEDADVGLAVVTVSASDEDEGANTKLRYQITSGNKGGAFDIEPEVGTIFIAQPLDYE 1957
Query: 165 KQQLY 169
+Q+ Y
Sbjct: 1958 QQKRY 1962
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 26/165 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------ATEHQGPIQDEGGL 82
G ++QV A D D G G V+Y L+ ++ A F + P A Q E +
Sbjct: 1474 GTFVLQVHAVDADEGANGKVKYGLMHRDS-ATPAFRIYPDTGVIVTARRFDRERQREYSI 1532
Query: 83 SSTAT------------VNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
+ TAT + +++ D ND +P+F++L YE+ + E G + RV A D D
Sbjct: 1533 TVTATDWAEEPLIGICQLTVQILDQNDNSPKFENLRYEYFLREDTLVGTSFLRVAAHDDD 1592
Query: 130 EGQNAVVYYSVPEDIPFVVDAN--TGDIRTNKALDYEKQQLYLER 172
G NA + YS+ ++ P + N TG + N+ + Q Y+ R
Sbjct: 1593 FGSNAAILYSMSQEQPEYLQVNPVTGWVYVNQPI---SQTAYITR 1634
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 31/166 (18%)
Query: 30 GVTLMQVKATDKDSGKFG---LVEYRLLDN--NTDAASYFNLDPAT-------------- 70
G +M++ A D D G ++ YR+ +N + + A F++D +T
Sbjct: 2118 GTFVMEMTAVDADDAAVGQNAILTYRITENAHSPNGAELFSIDSSTGSISVAADGLDREL 2177
Query: 71 --EHQGPIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHA 125
H I+ D GG++ TATV + VTDIND P F+ SVPE Q + + A
Sbjct: 2178 ADRHHLVIEAMDGGGMTGTATVTVAVTDINDHVPTFREEWCGASVPESTQQDAPLLELSA 2237
Query: 126 TDADEGQNAVVYYSVPE---DIPFVVDAN----TGDIRTNKALDYE 164
D DEG + + +SV + PF + ++ +R + LD+E
Sbjct: 2238 VDPDEGVHGQLSFSVVGGDVEQPFYMVSHRLEQRATLRLKRKLDFE 2283
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV 140
L++ V + +TD+ND P F S YE SV EG Q G +V +V A D D G N + YS+
Sbjct: 1756 LAAFTRVYVNITDVNDNVPFFTSSIYEASVTEGAQVGTSVLQVSAHDKDLGLNGEITYSL 1815
Query: 141 PEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERV 173
D F +D G I T D E + YL V
Sbjct: 1816 LNDSSGDHRLFRIDPKYGVIFTEAVFDREARSSYLLEV 1853
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQ-SLPY--EFSVPEGQ-DGLAVGRVHATDADEGQNAVVY 137
LSSTA V + V D+N+ P F+ L Y + SV E Q G V +VHA DADEG N V
Sbjct: 1435 LSSTARVIVGVDDVNNNKPVFEECLQYREQASVLENQPTGTFVLQVHAVDADEGANGKVK 1494
Query: 138 YSV----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y + F + +TG I T + D E+Q+ Y
Sbjct: 1495 YGLMHRDSATPAFRIYPDTGVIVTARRFDRERQREY 1530
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSV---PEGQDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
V +++TD+ND PE+ PY + P+ G V ++ A D DEG++ V Y + +
Sbjct: 1030 VKLKITDVNDNVPEWNMKPYPYLAVVPPDAPMGTFVYQLQARDGDEGRSGEVEYFLSDGG 1089
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
D F VD TG + T L ++K + YL V
Sbjct: 1090 DGCFAVDKKTGRVLTTGLL-FQKDREYLLSV 1119
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 17 LFYGAMARDKHELGVTLM----QVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH 72
L A++ K ++ +L+ + + +++G+ L R LD +D Y + A E
Sbjct: 1165 LVVSAISFQKLQISYSLLINPSSLFSIRQETGEISLT--RTLDYESDQRRYLLMVRARE- 1221
Query: 73 QGPIQDEGGLSSTATVNIRVTDINDKNPE-FQSLPYEFSVPEG-QDGLAVGRVHATDADE 130
D LS+ V + +TD ND PE FQS+ VPE ++ +V ATD D
Sbjct: 1222 -----DPDSLSTATEVQVFITDENDCLPEFFQSIYSVDGVPETVTTATSLLQVLATDCDS 1276
Query: 131 GQNA-VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
G NA + YY++ D F + + G I + LD+E+ E V +
Sbjct: 1277 GFNAELTYYTLSPD--FSISPH-GTIFPARRLDFERPNHLYEFVVM 1319
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 70/144 (48%), Gaps = 24/144 (16%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT--EHQGP--------IQDEGG 81
+L+QV ATD DSG + Y L + + + + PA + + P + +GG
Sbjct: 1265 SLLQVLATDCDSGFNAELTYYTLSPDFSISPHGTIFPARRLDFERPNHLYEFVVMAVDGG 1324
Query: 82 ---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE--GQDGLAVGRVHATDAD-EGQNAV 135
S TATV +R+ ++ND+ PEF Y V E G + L V V A D D +G
Sbjct: 1325 DEPHSGTATVRVRIANVNDEAPEFSQPVYRTFVSEDAGPNTL-VATVLAKDPDGDG---- 1379
Query: 136 VYYSVP---EDIPFVVDANTGDIR 156
+ YS+ E+ FV+D+ G IR
Sbjct: 1380 ITYSITAGNEEANFVIDSLKGLIR 1403
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 35/175 (20%)
Query: 14 SDSLFYGAMARDKHELGVTLMQVKATDKDS-GKFGLVEYRLLDNNTDAASYFNLDPAT-- 70
S S +YG++ + V ++QV A+D D G + Y + + A S+F ++ T
Sbjct: 1994 SMSEYYGSVIEELDGSPVFVLQVTASDPDKDADQGAIRYSI--HGQGAESHFMINDITGE 2051
Query: 71 ---------EHQGPIQ-------DEG-GLSSTATVNIRVTDINDKNPEFQSLPYEFSV-- 111
E + + +EG GL+ V I V DIND +P F P +
Sbjct: 2052 MYAQRTMDREERAVWRFVVMATDEEGEGLTGFTDVIISVWDINDNSPTFLCAPDNCNTNV 2111
Query: 112 ----PEGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP-------FVVDANTGDI 155
P G + + V A DA GQNA++ Y + E+ F +D++TG I
Sbjct: 2112 AENSPPGTFVMEMTAVDADDAAVGQNAILTYRITENAHSPNGAELFSIDSSTGSI 2166
Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 24/164 (14%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP- 75
++G+ ++ V A+D+D G + Y++ N A F+++P E Q
Sbjct: 1905 DVGLAVVTVSASDEDEGANTKLRYQITSGNKGGA--FDIEPEVGTIFIAQPLDYEQQKRY 1962
Query: 76 ----IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHAT----- 126
+ +G A V + V + ND+ P F Y SV E DG V + T
Sbjct: 1963 KLLVLASDGKWEDYAAVVVTVVNKNDEAPVFSMSEYYGSVIEELDGSPVFVLQVTASDPD 2022
Query: 127 -DADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
DAD+G + + F+++ TG++ + +D E++ ++
Sbjct: 2023 KDADQGAIRYSIHGQGAESHFMINDITGEMYAQRTMDREERAVW 2066
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 25/172 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY-----------FNL 66
+ GA + + L+++ A D D G G + + ++ + + Y L
Sbjct: 2217 WCGASVPESTQQDAPLLELSAVDPDEGVHGQLSFSVVGGDVEQPFYMVSHRLEQRATLRL 2276
Query: 67 DPATEHQGPIQ---------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFS-VPEGQD 116
+ + P + ++ SS I+V D ND P F ++ S +PE
Sbjct: 2277 KRKLDFENPGEQRFNLTIRVEDSDFSSLINCLIQVEDENDNAPVFVPKTHQLSALPEDVS 2336
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV-PEDIPF--VVDANTGDIRTNKALDYE 164
G +V +V ATD+D G N ++YS+ P+ P+ ++ G + K LD E
Sbjct: 2337 VGTSVVQVVATDSDSGPNGDIWYSILPQSDPYDQFTVSHAGVVAVAKPLDRE 2388
Score = 35.4 bits (80), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 63/160 (39%), Gaps = 31/160 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT--------------EHQG 74
+G + Q++A D D G+ G VEY L D F +D T E+
Sbjct: 1061 MGTFVYQLQARDGDEGRSGEVEYFLSDGGDGC---FAVDKKTGRVLTTGLLFQKDREYLL 1117
Query: 75 PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV----PEGQDGLAVGRVHATDADE 130
+ G+ S + + + P+F + Y S+ PEGQ L V +
Sbjct: 1118 SVVALDGMGSHSEPAMLSVVAGARPPQFTNSSYSISIPENTPEGQPFLVVSAISF----- 1172
Query: 131 GQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQ 167
Q + YS+ P + F + TG+I + LDYE Q
Sbjct: 1173 -QKLQISYSLLINPSSL-FSIRQETGEISLTRTLDYESDQ 1210
>gi|297664216|ref|XP_002810567.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2 [Pongo
abelii]
Length = 2958
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 85/181 (46%), Gaps = 26/181 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS-YFNLDPAT---EHQG 74
Y R+ E+G ++ V+ATD D+ + YRLL+ + + S F +DP + +G
Sbjct: 329 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRSGVIRTRG 388
Query: 75 PI------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D G S+TA V + V D ND P+F Y V E
Sbjct: 389 PVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYVVQVREDVT 448
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLER 172
G V RV A+D D+G NA+V+YS+ F +DA TG + LDYE + Y R
Sbjct: 449 PGSPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLR 508
Query: 173 V 173
V
Sbjct: 509 V 509
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LD 67
Y R+ G +++V A+D+D G LV Y ++ N Y + LD
Sbjct: 439 YVVQVREDVTPGSPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 498
Query: 68 PATEHQGPIQ---DEGG---LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
T + ++ +GG LS+ + V ++V DIND P F S P++ +V E G
Sbjct: 499 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 558
Query: 120 VGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V A DAD G NA + Y V D PF ++ TG I LD E+ Y
Sbjct: 559 VLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFY 611
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------------AASYFNLDPATEHQ-- 73
+G +++ V A D+D+ ++ Y++ NT + LD E Q
Sbjct: 660 VGTSVVTVSAVDRDA--HSVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYV 717
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G TA + + VTD N P FQS Y +V E + G V + ATD D G
Sbjct: 718 LAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 777
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + IP F +DA+TG + T LDYE Q Y
Sbjct: 778 ENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSY 816
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 33/181 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPATE---- 71
Y A + G + ++A D D G+ G +EY L D+ ++ +F+LDP T
Sbjct: 221 YQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSN--QFFSLDPITGAVTT 278
Query: 72 -------------HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ QD G S+ AT+ I VTD ND +P F+ Y+ S+ E +
Sbjct: 279 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 338
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV-------PEDIPFVVDANTGDIRTNKALDYEKQQL 168
G V V ATD D NA + Y + P ++ F +D +G IRT +D E+ +
Sbjct: 339 VGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEV-FEIDPRSGVIRTRGPVDREEVES 397
Query: 169 Y 169
Y
Sbjct: 398 Y 398
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLDPATEHQGPIQD- 78
+++Q+ ATD+DSG G V Y + + LD Q ++
Sbjct: 868 SVLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAY 927
Query: 79 --EGGLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
+ G+ T V + V D+ND P F+ ++ V E GLAV RV ATD DEG
Sbjct: 928 AVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGT 987
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 988 NAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYEDRPEYV 1028
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSSTA 86
G T++ + ATD+D+G+ + Y + D+ F +D A Q + E +S T
Sbjct: 763 GTTVVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTL 818
Query: 87 TVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
+ R V D+ND P+F Y+ SV E +V ++ ATD D
Sbjct: 819 AITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRD 878
Query: 130 EGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N V+Y+ D F+V++ +G +RT + LD E Y+ R + + K
Sbjct: 879 SGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYAVDK 931
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 32/163 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G+ + +V ATD D G + Y++++ N F LD + + D
Sbjct: 971 IGLAVARVTATDPDEGTNAQIMYQIVEGNI--PEVFQLDIFSGELTALVDLDYEDRPEYV 1028
Query: 79 ------EGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRV 123
L S ATV++R+ D ND P + F S P G A+GRV
Sbjct: 1029 LVIQATSAPLVSRATVHVRLLDRNDNPPVLGNFEILFNNYVTNRSSSFPGG----AIGRV 1084
Query: 124 HATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
A D D + + ++ V ++A+TG+++ ++ALD +
Sbjct: 1085 PAHDPDISDSLTYSFERGNELSLVLLNASTGELKLSRALDNNR 1127
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 32/136 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASY-------------FN 65
LG ++ V+A D D+G +EYRL ++N T S F
Sbjct: 555 LGYLVLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFYSFG 614
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
++ A +H P L+++A+V++ V D+ND NP F Y + E G +V V
Sbjct: 615 VE-ARDHGTP-----ALTASASVSVTVLDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVS 668
Query: 125 ATDADEGQNAVVYYSV 140
A D D ++V+ Y +
Sbjct: 669 AVDRDA--HSVITYQI 682
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 100 PEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV------PEDIPFVVDANT 152
P+FQ Y+ +VPE Q G V + A D DEG+ + Y++ + F +D T
Sbjct: 214 PQFQPPSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPIT 273
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G + T + LD E + ++ RV
Sbjct: 274 GAVTTAEELDRETKSTHVFRV 294
>gi|301612237|ref|XP_002935627.1| PREDICTED: cadherin-6-like [Xenopus (Silurana) tropicalis]
Length = 792
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 87/189 (46%), Gaps = 37/189 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + E+G ++QV A D D +G V Y +L YF+++ T
Sbjct: 165 LYTATVPEMSEVGTFVVQVTANDADDPTYGNSARVVYSILQ----GQPYFSVESETGIIK 220
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
++Q IQ + GGLS T VNI ++D+ND P F Y+F
Sbjct: 221 TALPNMDRENREQYQVVIQAKDMGGQMGGLSGTTVVNITLSDVNDNPPRFYQSTYQFRAL 280
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPED-----IPFVVDANT--GDIRTNKALDYE 164
E G ++G++ A DAD G+NA + Y + E + D T G I KALD+E
Sbjct: 281 ESSPVGSSIGKIKANDADVGENAEMEYHISEGDESNMFEIITDRITQEGAITVKKALDFE 340
Query: 165 KQQLYLERV 173
K++LY +V
Sbjct: 341 KKKLYTLKV 349
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE + G V +V A DAD+ G +A V YS+ + P
Sbjct: 149 IKIHDINDNEPIFTQDLYTATVPEMSEVGTFVVQVTANDADDPTYGNSARVVYSILQGQP 208
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 209 YFSVESETGIIKTALPNMDRENREQY 234
>gi|157820811|ref|NP_001102865.1| protocadherin beta-14 precursor [Rattus norvegicus]
gi|149017307|gb|EDL76358.1| rCG49607 [Rattus norvegicus]
Length = 799
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 20/172 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY + +G +++ + A D D G +G + Y L D F ++P +
Sbjct: 246 FYEVQVPEDTPIGSSIITISAKDLDMGNYGKISYSFLHATEDVRKTFEINPTSGEVNLRS 305
Query: 71 --------EHQGPIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
+ IQ D GGLS+ T++++V DIND PE ++PE +
Sbjct: 306 LLDFEVIQSYSVTIQATDGGGLSAKCTLSVKVLDINDNAPEVIISSVTKTIPENASETLI 365
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVD---ANTGDIRTNKALDYEKQQLY 169
D D G N + S+P+D+PF++ N + + KALD E + Y
Sbjct: 366 TLFSVRDQDSGDNGRILCSIPDDLPFILKPTFKNFFTLLSEKALDRESRAEY 417
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L++ T+ ++V+DIND P F Y V E L +G + ATD+D G NA + YS+
Sbjct: 431 LTTQHTITVQVSDINDNAPAFTQTSYTMFVHENNSPALHIGTISATDSDSGSNAHITYSL 490
Query: 141 --PEDIPFVVD------ANTGDIRTNKALDYEKQQLYLERV 173
P D +D A+ G + +ALDYE Q + RV
Sbjct: 491 MPPRDPQLALDSLISINADNGQLFALRALDYEVLQAFEFRV 531
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS-- 139
S T V I+V DIND PEF YE VPE G ++ + A D D G + YS
Sbjct: 223 SGTTLVLIKVLDINDNAPEFAQNFYEVQVPEDTPIGSSIITISAKDLDMGNYGKISYSFL 282
Query: 140 -VPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
ED+ F ++ +G++ LD+E Q Y
Sbjct: 283 HATEDVRKTFEINPTSGEVNLRSLLDFEVIQSY 315
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 77/187 (41%), Gaps = 35/187 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL---------LDN----NTDAASYFN 65
Y + + + + + ATD DSG + Y L LD+ N D F
Sbjct: 456 YTMFVHENNSPALHIGTISATDSDSGSNAHITYSLMPPRDPQLALDSLISINADNGQLFA 515
Query: 66 LDP-------ATEHQGPIQDEG--GLSSTATVNIRVTDINDKNP------EFQSLPYEFS 110
L A E + D G LSS A V + V D ND P + S PY
Sbjct: 516 LRALDYEVLQAFEFRVGATDRGSPALSSQALVRVVVLDDNDNAPFVLYPLQNASAPYTEL 575
Query: 111 VPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL---DY 163
+P + G V +V A D D GQNA + + + E F V A+ G++RT++ L D
Sbjct: 576 LPRAAEPGYLVTKVVAVDRDSGQNAWLSFQLLKATEPGLFSVWAHNGEVRTSRLLSERDA 635
Query: 164 EKQQLYL 170
K +L L
Sbjct: 636 PKHKLLL 642
>gi|195026491|ref|XP_001986268.1| GH21267 [Drosophila grimshawi]
gi|193902268|gb|EDW01135.1| GH21267 [Drosophila grimshawi]
Length = 3596
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 66/132 (50%), Gaps = 21/132 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP----------------ATEH 72
+G +++QV ATD D G G ++Y L D + + S F +DP A H
Sbjct: 1024 VGTSVIQVSATDPDIGLNGRIKYLLSDRDQEDGS-FVIDPTSGTIRTNKGLDRESVAIYH 1082
Query: 73 QGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
I + G LSST V IR+ D+ND P F S VPE G VG +HA D
Sbjct: 1083 LTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDP 1142
Query: 129 DEGQNAVVYYSV 140
DEG NAVV+YS+
Sbjct: 1143 DEGVNAVVHYSI 1154
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 84/180 (46%), Gaps = 31/180 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQ----- 73
Y A + +G T++ V ATD D G + Y L + + + S + DP T +Q
Sbjct: 904 YSASVFEDAPIGTTVLVVSATDSDVGINAQITYSLNEESINGLS--SPDPFTINQQTGAI 961
Query: 74 ---GPIQDE-------------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
P+ E GG LS T V I VTD+ND P F++ Y+ S+ E
Sbjct: 962 ITSAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEISVTDVNDNAPAFKNPLYQSSILED 1021
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G +V +V ATD D G N + Y + ED FV+D +G IRTNK LD E +Y
Sbjct: 1022 ALVGTSVIQVSATDPDIGLNGRIKYLLSDRDQEDGSFVIDPTSGTIRTNKGLDRESVAIY 1081
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 83/189 (43%), Gaps = 42/189 (22%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS--------YFNLDPAT 70
+ A R+ +G T++ ++ATD+D GK +EY + + TD A F +D
Sbjct: 473 FEASIREGATVGSTVITLRATDQDIGKNAEIEYGI-EAITDGAGVVQDQEMPIFRID--- 528
Query: 71 EHQGPIQDEGGL-------------------------SSTATVNIRVTDINDKNPEFQSL 105
G I L ++TA+V +++ D ND P+F
Sbjct: 529 SRSGVISTRSSLDRETSDSYHMLVTASDMAAAQSERKTATASVVVKILDDNDNYPQFSER 588
Query: 106 PYEFSVPEGQ--DGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKA 160
Y VPE Q D V + ATDAD+G NA + Y++ F +D+ +GD+ K
Sbjct: 589 TYTVQVPEDQWGDDNNVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLVKP 648
Query: 161 LDYEKQQLY 169
LDYE + Y
Sbjct: 649 LDYESVRSY 657
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 75/164 (45%), Gaps = 25/164 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI---------------- 76
+ ++ATD D G + Y ++ NT S F++D + +
Sbjct: 605 VAHIRATDADQGNNAAIRYAIIGGNTQ--SQFSIDSMSGDVSLVKPLDYESVRSYRLVIR 662
Query: 77 -QDEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
QD G S + T + V D ND P F + ++ SV E G + RV A D+DEG
Sbjct: 663 AQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGA 722
Query: 133 NAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA + YS+ E + P VD TG ++T K LD E+Q + +V
Sbjct: 723 NAEISYSISERDDNFPLAVDPRTGWVQTIKPLDREEQNRFAFQV 766
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 55/102 (53%), Gaps = 9/102 (8%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG S T+TV+I +TD N+ P F++ PY SV E G V V ATD+D G NA +
Sbjct: 875 DSGGRSDTSTVHINITDANNYAPIFENAPYSASVFEDAPIGTTVLVVSATDSDVGINAQI 934
Query: 137 YYSVPEDI--------PFVVDANTGDIRTNKALDYEKQQLYL 170
YS+ E+ PF ++ TG I T+ LD E YL
Sbjct: 935 TYSLNEESINGLSSPDPFTINQQTGAIITSAPLDRETTSGYL 976
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
S T T+ + V D ND +P F++ +E S+ EG G V + ATD D G+NA + Y +
Sbjct: 449 SGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIE 508
Query: 142 -----------EDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+++P F +D+ +G I T +LD E Y
Sbjct: 509 AITDGAGVVQDQEMPIFRIDSRSGVISTRSSLDRETSDSY 548
Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 29/167 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP-- 75
+G +++V+A D D G + Y + + + + +DP T E Q
Sbjct: 706 VGYNIIRVQAYDSDEGANAEISYSISERDDNFP--LAVDPRTGWVQTIKPLDREEQNRFA 763
Query: 76 ---IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDA 128
+ +GG+ S++++V I V D+ND +P F YE +V E Q G V V ATD
Sbjct: 764 FQVVAKDGGVPPKSASSSVVITVQDVNDNDPTFNPKYYEANVGEDQPPGTPVTTVTATDP 823
Query: 129 DEGQNAVVYYSVPEDIP---FVVDANTGD--IRTNKALDYEKQQLYL 170
DE ++ ++Y + F + + G I + LDY++++ +L
Sbjct: 824 DE--DSRLHYEISTGNTRGRFAITSQNGRGLITIAQPLDYKQEKRFL 868
>gi|426330697|ref|XP_004026343.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2, partial
[Gorilla gorilla gorilla]
Length = 2911
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 85/181 (46%), Gaps = 26/181 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS-YFNLDPAT---EHQG 74
Y R+ E+G ++ V+ATD D+ + YRLL+ + + S F +DP + +G
Sbjct: 282 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRSGVIRTRG 341
Query: 75 PI------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D G S+TA V + V D ND P+F Y V E
Sbjct: 342 PVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYVVQVREDVT 401
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLER 172
G V RV A+D D+G NA+V+YS+ F +DA TG + LDYE + Y R
Sbjct: 402 PGSPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLR 461
Query: 173 V 173
V
Sbjct: 462 V 462
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LD 67
Y R+ G +++V A+D+D G LV Y ++ N Y + LD
Sbjct: 392 YVVQVREDVTPGSPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 451
Query: 68 PATEHQGPIQ---DEGG---LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
T + ++ +GG LS+ + V ++V DIND P F S P++ +V E G
Sbjct: 452 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 511
Query: 120 VGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V A DAD G NA + Y V D PF ++ TG I LD E+ Y
Sbjct: 512 VLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFY 564
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------------AASYFNLDPATEHQ-- 73
+G +++ V A D+D+ ++ Y++ NT + LD E Q
Sbjct: 613 VGTSVVTVSAVDRDA--HSVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYV 670
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G TA + + VTD N P FQS Y +V E + G V + ATD D G
Sbjct: 671 LAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 730
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + IP F +DA+TG + T LDYE Q Y
Sbjct: 731 ENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSY 769
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 33/181 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPATE---- 71
Y A + G + ++A D D G+ G +EY L D+ ++ +F+LDP T
Sbjct: 174 YQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSN--QFFSLDPITGAVTT 231
Query: 72 -------------HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ QD G S+ AT+ I VTD ND +P F+ Y+ S+ E +
Sbjct: 232 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 291
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV-------PEDIPFVVDANTGDIRTNKALDYEKQQL 168
G V V ATD D NA + Y + P ++ F +D +G IRT +D E+ +
Sbjct: 292 VGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEV-FEIDPRSGVIRTRGPVDREEVES 350
Query: 169 Y 169
Y
Sbjct: 351 Y 351
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLDPATEHQGPIQD- 78
+++Q+ ATD+DSG G V Y + + LD Q ++
Sbjct: 821 SVLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAY 880
Query: 79 --EGGLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
+ G+ T V + V D+ND P F+ ++ V E GLAV RV ATD DEG
Sbjct: 881 AVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGT 940
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 941 NAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYEDRPEYV 981
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSSTA 86
G T++ + ATD+D+G+ + Y + D+ F +D A Q + E +S T
Sbjct: 716 GTTVVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTL 771
Query: 87 TVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
+ R V D+ND P+F Y+ SV E +V ++ ATD D
Sbjct: 772 AITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRD 831
Query: 130 EGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N V+Y+ D F+V++ +G +RT + LD E Y+ R + + K
Sbjct: 832 SGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYAVDK 884
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 32/163 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G+ + +V ATD D G + Y++++ N F LD + + D
Sbjct: 924 IGLAVARVTATDPDEGTNAQIMYQIVEGNI--PEVFQLDIFSGELTALVDLDYEDRPEYV 981
Query: 79 ------EGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRV 123
L S ATV++R+ D ND P + F S P G A+GRV
Sbjct: 982 LVIQATSAPLVSRATVHVRLLDRNDNPPVLGNFEILFNNYVTNRSSSFPGG----AIGRV 1037
Query: 124 HATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
A D D + + ++ V ++A+TG+++ ++ALD +
Sbjct: 1038 PAHDPDISDSLTYSFERGNELSLVLLNASTGELKLSRALDNNR 1080
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 32/136 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASY-------------FN 65
LG ++ V+A D D+G +EYRL ++N T S F
Sbjct: 508 LGYLVLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFYSFG 567
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
++ A +H P L+++A+V++ V D+ND NP F Y + E G +V V
Sbjct: 568 VE-ARDHGTP-----ALTASASVSVTVLDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVS 621
Query: 125 ATDADEGQNAVVYYSV 140
A D D ++V+ Y +
Sbjct: 622 AVDRDA--HSVITYQI 635
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 100 PEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV------PEDIPFVVDANT 152
P+FQ Y+ +VPE Q G V + A D DEG+ + Y++ + F +D T
Sbjct: 167 PQFQPPSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPIT 226
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G + T + LD E + ++ RV
Sbjct: 227 GAVTTAEELDRETKSTHVFRV 247
>gi|126291023|ref|XP_001377899.1| PREDICTED: protocadherin gamma-A5 [Monodelphis domestica]
Length = 846
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 77/175 (44%), Gaps = 25/175 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y R+ G L+ V ATD D G G V Y + + A+ F L+ T
Sbjct: 245 MYSVSVRENVPKGTLLLAVNATDSDEGINGEVTYSFRNIDDKASEIFQLNSRTGKLILGE 304
Query: 71 ------------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DG 117
E QG +D GGL ++A V +RV D+ND PE + S+PE G
Sbjct: 305 PLDYEESKIYEMEIQG--EDGGGLLTSAKVLVRVLDVNDNPPEVMVTSFSSSIPENSPPG 362
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIPFVVD---ANTGDIRTNKALDYEKQQLY 169
+ + D D G N + S+P +PF ++ AN + T++ LD E+ +Y
Sbjct: 363 TVIALLKVHDRDSGNNGHITCSIPGHLPFKLEKSYANYYSLVTDRILDREQASMY 417
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYS 139
GLS TA + + V D ND P F Y SV E G + V+ATD+DEG N V YS
Sbjct: 220 GLSGTARIRVLVLDANDNAPVFTQSMYSVSVRENVPKGTLLLAVNATDSDEGINGEVTYS 279
Query: 140 V------PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+I F +++ TG + + LDYE+ ++Y
Sbjct: 280 FRNIDDKASEI-FQLNSRTGKLILGEPLDYEESKIY 314
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 17/130 (13%)
Query: 46 FGLVEYRLLDNNTDAASYFNLDPATEHQG-PIQDEGGLSSTATVNIRVTDINDKNPEFQS 104
+ LV R+LD + AS +N+ QG P+ LS+ ++++V DIND P F
Sbjct: 401 YSLVTDRILDR--EQASMYNVTVTAIDQGTPL-----LSANTHISLQVEDINDNPPHFSQ 453
Query: 105 LPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDIPF--------VVDANTGDI 155
Y +PE G ++ V A+D+D +N+ + YS+ + I + +++ TG +
Sbjct: 454 TSYSAYIPENNPRGSSIYSVIASDSDTEENSRITYSISDYIFYGASLSSYISINSETGVL 513
Query: 156 RTNKALDYEK 165
++ DYE+
Sbjct: 514 YALRSFDYEQ 523
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 33/176 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN---NTDAASYFNLDPAT----- 70
Y A + + G ++ V A+D D+ + + Y + D +SY +++ T
Sbjct: 456 YSAYIPENNPRGSSIYSVIASDSDTEENSRITYSISDYIFYGASLSSYISINSETGVLYA 515
Query: 71 ------------EHQGPIQDEGG--LSSTATVNIRVTDINDKNPE--FQSLP------YE 108
+ Q +D G L S ++ + + D ND PE + + P E
Sbjct: 516 LRSFDYEQFRDLQLQVTAKDWGDPPLCSNVSLTLFILDQNDNAPEILYPTFPTDGSTGVE 575
Query: 109 FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKAL 161
+ + G V +V DAD GQNA + Y + + F VD +TG+IRT +A
Sbjct: 576 LAPRSAEPGYLVTKVVVVDADSGQNAWLSYHLLKATDPGLFSVDLHTGEIRTTRAF 631
Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDIPF 146
+ I V DIND P F++ E + E G+ G A D D G N++ Y + ++ F
Sbjct: 118 LEIEVMDINDNAPRFRTDEVEIKINENAAPGIRFGLPSARDPDRGVNSLQSYQLSQNKHF 177
Query: 147 VVDANTG-------DIRTNKALDYEKQQLY 169
++ +G ++ +ALD E++ ++
Sbjct: 178 SLNVLSGIDGAKYPELVLERALDREEESVH 207
>gi|444721941|gb|ELW62648.1| Protocadherin Fat 4 [Tupaia chinensis]
Length = 2618
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 82/172 (47%), Gaps = 26/172 (15%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL+ Y + N D A + +
Sbjct: 769 ATIPESHSIGAIVRTVSARDRDAAMNGLIRYSISSGNEDGIFAINSSTGVLTLAKALDYE 828
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEF---SVPEGQDGLAV 120
+H+ I D G ++ T +V I V D+ND +P F LP E+ + G V
Sbjct: 829 LCQKHEMIISATDGGWVARTGYCSVTINVIDVNDNSPVF--LPDEYFPTVLENAPSGTTV 886
Query: 121 GRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y+V D+ FV+D NTG I T LD+E +Q Y
Sbjct: 887 INLNATDADSGTNAVIAYTVQSSDSDL-FVIDPNTGVITTQGFLDFETKQSY 937
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 24/162 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V A DKDSG G ++Y ++ N + + F+++ AT I+
Sbjct: 360 ILTVSAMDKDSGPNGQLDYEIIHGNKENS--FSINHATGEIRSIRPLDREKVSHYVLTVR 417
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G S + +V I + D ND P F + + VPE G V RV +D D G
Sbjct: 418 SSDKGSPSQSTSVKVIINILDENDNAPRFSQI-FSAHVPENFPLGYTVTRVTTSDEDIGV 476
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA+ YS+ + +PF ++ +TGDI ++ LD E Y RV
Sbjct: 477 NAISRYSIMDTSLPFTINPSTGDIIISRPLDREDTDRYRIRV 518
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 22/167 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y ++D + F ++P+T
Sbjct: 447 SQIFSAHVPENFPLGYTVTRVTTSDEDIGVNAISRYSIMDTSLP----FTINPSTGDIII 502
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V I VTD+ND P F Y PE + G
Sbjct: 503 SRPLDREDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPELTEIGS 562
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
V +V ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 563 KVTQVSATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQVLRYQ 609
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 78/169 (46%), Gaps = 32/169 (18%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI---------- 76
++G L++V A D KD G VEY L ++ D F LD AT G I
Sbjct: 670 KVGTKLIKVTAIDDKDFGLNSEVEYFL--SSEDHLGKFKLDNAT---GWISVASSLISDL 724
Query: 77 ----------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRV 123
+D+G LSS ATV I VT+ N PEF ++PE G V V
Sbjct: 725 NQNFLIIVTAKDKGNPPLSSQATVQITVTEENYHTPEFSQSHMSATIPESHSIGAIVRTV 784
Query: 124 HATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D N ++ YS+ ED F ++++TG + KALDYE Q +
Sbjct: 785 SARDRDAAMNGLIRYSISSGNEDGIFAINSSTGVLTLAKALDYELCQKH 833
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 76/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 883 GTTVINLNATDADSGTNAVIAYTVQSSDSD---LFVIDPNT---GVITTQGFLDFETKQS 936
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S AT+NI++ N+ P F S Y F + E G VG V A+
Sbjct: 937 YHLTVKAFNVPDEERCSFATINIQLKGTNEYVPRFVSKLYYFEISEAAPKGTVVGEVFAS 996
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F ++ TG I + LD EK+ ERV L
Sbjct: 997 DRDLGTDGEVHYLIFGSSRKKGFQINKKTGQIYVSGLLDREKE----ERVSL 1044
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV-PEDIP 145
+N+ V D+ND P F S Y ++PE G V V+A+DAD NAV+ YS+ +
Sbjct: 21 INVIVYDVNDNVPTFASKMYFTTIPEDAPTGTDVLLVNASDADASTNAVISYSIMGGNAQ 80
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F ++ +TG I T+ LD E + Y
Sbjct: 81 FTINPSTGQIITSALLDRETKDNY 104
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 31/135 (22%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G ++ V A+D D+ ++ Y ++ N + F ++P+T G I
Sbjct: 51 GTDVLLVNASDADASTNAVISYSIMGGN----AQFTINPST---GQIITSALLDRETKDN 103
Query: 77 -------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHA 125
D G LSS+ +V I VTD+ND P FQ PY +P G V V
Sbjct: 104 YTLVVVSSDAGSPEPLSSSTSVLITVTDVNDNPPRFQHHPYVTHIPSPTLAGSFVFAVTV 163
Query: 126 TDADEGQNAVVYYSV 140
TDAD G N+ ++YS+
Sbjct: 164 TDADIGPNSELHYSL 178
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV- 140
SS ++I V D+ND +P F+ P+ + E + V A D D G N + Y +
Sbjct: 322 FSSYEKLDITVLDVNDNSPIFKEDPFISEILENLSPRKILTVSAMDKDSGPNGQLDYEII 381
Query: 141 --PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
++ F ++ TG+IR+ + LD EK Y+ V
Sbjct: 382 HGNKENSFSINHATGEIRSIRPLDREKVSHYVLTV 416
>gi|351708750|gb|EHB11669.1| Cadherin EGF LAG seven-pass G-type receptor 2 [Heterocephalus
glaber]
Length = 2976
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 85/181 (46%), Gaps = 26/181 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS-YFNLDPAT---EHQG 74
Y R+ E+G ++ V+ATD D+ + YRLL+ + + S F +DP + +G
Sbjct: 355 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRSGVIRTRG 414
Query: 75 PI------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D G S+TA V + V D ND P+F Y V E
Sbjct: 415 PVDREEVESYKLIVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYVVQVREDVA 474
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLER 172
G V R+ A+D D+G NA+V+YS+ F +DA TG + LDYE + Y R
Sbjct: 475 PGAPVLRITASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLR 534
Query: 173 V 173
V
Sbjct: 535 V 535
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LD 67
Y R+ G ++++ A+D+D G LV Y ++ N Y + LD
Sbjct: 465 YVVQVREDVAPGAPVLRITASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 524
Query: 68 PATEHQGPIQ---DEGG---LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
T + ++ +GG LS+ + V ++V DIND P F S P++ +V E G
Sbjct: 525 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 584
Query: 120 VGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V A DAD G NA + Y V D PF ++ TG I LD E+ Y
Sbjct: 585 VLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFY 637
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------------AASYFNLDPATEHQ-- 73
+G +++ V A D+D+ ++ Y++ NT + LD E Q
Sbjct: 686 VGTSVVTVSAVDRDA--HSVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYV 743
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G TA + + VTD N P FQS Y +V E + G V + ATD D G
Sbjct: 744 LAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 803
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + IP F +DA+TG + T LDYE Q Y
Sbjct: 804 ENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSY 842
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 33/181 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPATE---- 71
Y A + +G ++ ++A D D G+ G +EY L D+ ++ +F+LDP T
Sbjct: 247 YQATVPENQPVGTSVASLRAIDTDEGEAGRLEYTMDALFDSRSN--HFFSLDPITGAVTT 304
Query: 72 -------------HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ QD G S+ AT+ I VTD ND +P F+ Y+ S+ E +
Sbjct: 305 AEELDRETKSTHVFRVTAQDHGVPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 364
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV-------PEDIPFVVDANTGDIRTNKALDYEKQQL 168
G V V ATD D NA + Y + P ++ F +D +G IRT +D E+ +
Sbjct: 365 VGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEV-FEIDPRSGVIRTRGPVDREEVES 423
Query: 169 Y 169
Y
Sbjct: 424 Y 424
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLDPATEHQGPIQD- 78
+++Q+ ATD+DSG G V Y + + LD Q ++
Sbjct: 894 SVLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYILRAY 953
Query: 79 --EGGLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
+ G+ T V + V D+ND P F+ ++ V E GLAV RV ATD DEG
Sbjct: 954 AVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGT 1013
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 1014 NAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYEDRPEYI 1054
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSSTA 86
G T++ + ATD+D+G+ + Y + D+ F +D A Q + E +S T
Sbjct: 789 GTTVVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTL 844
Query: 87 TVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
+ R V D+ND P+F Y+ SV E +V ++ ATD D
Sbjct: 845 AITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRD 904
Query: 130 EGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N V+Y+ D F+V++ +G +RT + LD E Y+ R + + K
Sbjct: 905 SGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYILRAYAVDK 957
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 32/163 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G+ + +V ATD D G + Y++++ N F LD + + D
Sbjct: 997 IGLAVARVTATDPDEGTNAQIMYQIVEGNI--PEVFQLDIFSGELTALVDLDYEDRPEYI 1054
Query: 79 ------EGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRV 123
L S ATV++R+ D ND P + F S P G A+GRV
Sbjct: 1055 LVIQATSAPLVSRATVHVRLLDRNDNPPVLGNFEILFNNYVTNRSSSFPGG----AIGRV 1110
Query: 124 HATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
A D D + + ++ V ++ +TG++R ++ALD +
Sbjct: 1111 PAHDPDISDSLTYSFERGNELSLVLLNGSTGELRLSRALDNNR 1153
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 32/136 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASY-------------FN 65
LG ++ V+A D D+G +EYRL ++N T S F
Sbjct: 581 LGYLVLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFYSFG 640
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
++ A +H P L+++A+V++ + D+ND NP F Y + E G +V V
Sbjct: 641 VE-ARDHGTP-----ALTASASVSVTIVDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVS 694
Query: 125 ATDADEGQNAVVYYSV 140
A D D ++V+ Y +
Sbjct: 695 AVDRDA--HSVITYQI 708
Score = 38.9 bits (89), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 100 PEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV------PEDIPFVVDANT 152
P+FQ Y+ +VPE Q G +V + A D DEG+ + Y++ + F +D T
Sbjct: 240 PQFQPPSYQATVPENQPVGTSVASLRAIDTDEGEAGRLEYTMDALFDSRSNHFFSLDPIT 299
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G + T + LD E + ++ RV
Sbjct: 300 GAVTTAEELDRETKSTHVFRV 320
>gi|426340701|ref|XP_004034266.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 [Gorilla
gorilla gorilla]
Length = 3287
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 85/176 (48%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQ--GP 75
Y A R+ +++V ATD+D GLV Y ++ N+ +F +D T E Q P
Sbjct: 550 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRG--HFAIDSLTGEIQVVAP 607
Query: 76 I--------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ QD G ++T +I+V DIND P F S P++ SV E G
Sbjct: 608 LDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSVLENAPLG 667
Query: 118 LAVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+V + A DAD G+NA + YS V D PFV+++ TG + + LD E + Y
Sbjct: 668 HSVIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATGWVSVSGPLDRESVEHYF 723
Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQG 74
+++Q+ ATD+D+ G V+Y N D F ++P + E
Sbjct: 979 SVLQISATDRDAHANGRVQYTF-QNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTA 1037
Query: 75 PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G L + + + V D+ND P F + +E V E G V ++ A D DEG
Sbjct: 1038 YAVDRGVPPLRTPVSFQVMVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDEG 1097
Query: 132 QNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE +Q Y+
Sbjct: 1098 PNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYV 1139
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 32/185 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL---DNNTDAASYFNLDPAT----- 70
Y R+ E G ++Q++ATD D+ + YR + AA+ F +DP +
Sbjct: 438 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLIST 497
Query: 71 ------EH------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH QG Q+ G S+T V+I V D ND P+F Y V
Sbjct: 498 SGQVDREHMESYELVVEASDQG--QEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVR 555
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E + V RV ATD D+ N +V+Y++ F +D+ TG+I+ LD+E ++
Sbjct: 556 EDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVVAPLDFEAERE 615
Query: 169 YLERV 173
Y R+
Sbjct: 616 YALRI 620
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V+I +TD N P FQS Y SV E + G + + A+D D G+NA + Y + +++P
Sbjct: 844 VHINITDANTHRPVFQSAHYSVSVNEDRPVGSTIVVISASDDDVGENARITYLLEDNLPQ 903
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DA++G I LDYE Q Y
Sbjct: 904 FRIDADSGAITLQAPLDYEDQVTY 927
Score = 49.7 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 29/180 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT------- 70
Y + + G +++V A D D+G+ G + Y L N+ + F++DP +
Sbjct: 330 YQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 389
Query: 71 --------EH--QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
H + QD G LS+T V + V D ND +P F+ Y ++ E ++G
Sbjct: 390 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRENVEEG 449
Query: 118 LAVGRVHATDADEGQNAVVYY--------SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ ++ ATD D NA + Y F +D +G I T+ +D E + Y
Sbjct: 450 YPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLISTSGQVDREHMESY 509
Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEH 72
S Y + +G T++ + A+D D G+ + Y L DN F +D A
Sbjct: 860 SAHYSVSVNEDRPVGSTIVVISASDDDVGENARITYLLEDN----LPQFRIDADSGAITL 915
Query: 73 QGPIQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQD 116
Q P+ E ++ T + R V D+ND P+F + Y V E
Sbjct: 916 QAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAP 975
Query: 117 GL-AVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ++ ATD D N V Y+ D F ++ +G +RT + LD E +Y
Sbjct: 976 PFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVY 1033
Score = 43.1 bits (100), Expect = 0.049, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 69/176 (39%), Gaps = 28/176 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI--------- 76
LG +++ ++A D D G+ +EY L D F ++ AT GP+
Sbjct: 666 LGHSVIHIQAVDADHGENARLEYSLTGVAPDTP--FVINSATGWVSVSGPLDRESVEHYF 723
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDAD 129
+D G LS++A+V + V D+ND PEF Y + E + V T D
Sbjct: 724 FGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNE-DAAVGTSVVSVTAVD 782
Query: 130 EGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
N+ + Y + G + LDY KQ+ Y + V S A
Sbjct: 783 RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLDY-KQERYFKLVLTASDRA 837
Score = 41.2 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 99 NPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDAN 151
+P+F Y+ VPE + G AV RV A D D G+ + YS+ + F +D
Sbjct: 322 HPQFPQYNYQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQ 381
Query: 152 TGDIRTNKALDYEKQQLYLERV 173
+G IRT ALD E + + RV
Sbjct: 382 SGLIRTAAALDRESMERHYLRV 403
Score = 37.7 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 20/154 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPI- 76
+G + Q+ A D D G + Y++++ N + + +LD + I
Sbjct: 1082 VGSVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIV 1141
Query: 77 --QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFS--VPEGQDGLA---VGRVHATDAD 129
L S ATV++R+ D ND +P + F+ V D +GR+ A D D
Sbjct: 1142 VQATSAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPD 1201
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALD 162
+ + ++ VV+ +G++R ++ LD
Sbjct: 1202 VSDHLFYSFERGNELQLLVVNQTSGELRLSRKLD 1235
>gi|397495185|ref|XP_003818440.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 isoform 1
[Pan paniscus]
Length = 3312
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 85/176 (48%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQ--GP 75
Y A R+ +++V ATD+D GLV Y ++ N+ +F +D T E Q P
Sbjct: 550 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRG--HFAIDSLTGEIQVVAP 607
Query: 76 I--------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ QD G ++T +I+V DIND P F S P++ SV E G
Sbjct: 608 LDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSVLENAPLG 667
Query: 118 LAVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+V + A DAD G+NA + YS V D PFV+++ TG + + LD E + Y
Sbjct: 668 HSVIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATGWVSVSGPLDRESVEHYF 723
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQG 74
+++Q+ ATD+D+ G V+Y N D F ++P + E
Sbjct: 979 SVLQISATDRDAHANGRVQYTF-QNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTA 1037
Query: 75 PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G L + ++ + V D+ND P F + +E V E G V ++ A D DEG
Sbjct: 1038 YAVDRGVPPLRTPVSIQVMVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDEG 1097
Query: 132 QNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE +Q Y+
Sbjct: 1098 PNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYV 1139
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 32/185 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL---DNNTDAASYFNLDPAT----- 70
Y R+ E G ++Q++ATD D+ + YR + AA+ F +DP +
Sbjct: 438 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLIST 497
Query: 71 ------EH------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH QG Q+ G S+T V+I V D ND P+F Y V
Sbjct: 498 SGRVDREHMESYELVVEASDQG--QEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVR 555
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E + V RV ATD D+ N +V+Y++ F +D+ TG+I+ LD+E ++
Sbjct: 556 EDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVVAPLDFEAERE 615
Query: 169 YLERV 173
Y R+
Sbjct: 616 YALRI 620
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V+I +TD N P FQS Y SV E + G + + A+D D G+NA + Y + +++P
Sbjct: 844 VHINITDANTHRPVFQSAHYSVSVNEDRPVGSTIVVISASDDDVGENARITYLLEDNLPQ 903
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DA++G I LDYE Q Y
Sbjct: 904 FRIDADSGAITLQAPLDYEDQVTY 927
Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 29/180 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT------- 70
Y + + G +++V A D D+G+ G + Y L N+ + F++DP +
Sbjct: 330 YQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 389
Query: 71 --------EHQGPI--QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
H + QD G LS+T V + V D ND +P F+ Y ++ E ++G
Sbjct: 390 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRENVEEG 449
Query: 118 LAVGRVHATDADEGQNAVVYY--------SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ ++ ATD D NA + Y F +D +G I T+ +D E + Y
Sbjct: 450 YPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESY 509
Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEH 72
S Y + +G T++ + A+D D G+ + Y L DN F +D A
Sbjct: 860 SAHYSVSVNEDRPVGSTIVVISASDDDVGENARITYLLEDN----LPQFRIDADSGAITL 915
Query: 73 QGPIQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQD 116
Q P+ E ++ T + R V D+ND P+F + Y V E
Sbjct: 916 QAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAP 975
Query: 117 GL-AVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ++ ATD D N V Y+ D F ++ +G +RT + LD E +Y
Sbjct: 976 PFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVY 1033
Score = 43.1 bits (100), Expect = 0.050, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 69/176 (39%), Gaps = 28/176 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI--------- 76
LG +++ ++A D D G+ +EY L D F ++ AT GP+
Sbjct: 666 LGHSVIHIQAVDADHGENARLEYSLTGVAPDTP--FVINSATGWVSVSGPLDRESVEHYF 723
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDAD 129
+D G LS++A+V + V D+ND PEF Y + E + V T D
Sbjct: 724 FGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNE-DAAVGTSVVSVTAVD 782
Query: 130 EGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
N+ + Y + G + LDY KQ+ Y + V S A
Sbjct: 783 RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLDY-KQERYFKLVLTASDRA 837
Score = 41.2 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 99 NPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDAN 151
+P+F Y+ VPE + G AV RV A D D G+ + YS+ + F +D
Sbjct: 322 HPQFPQYNYQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQ 381
Query: 152 TGDIRTNKALDYEKQQLYLERV 173
+G IRT ALD E + + RV
Sbjct: 382 SGLIRTAAALDRESMERHYLRV 403
Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 20/154 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPI- 76
+G + Q+ A D D G + Y++++ N + + +LD + I
Sbjct: 1082 VGSVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIV 1141
Query: 77 --QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFS--VPEGQDGLA---VGRVHATDAD 129
L S ATV+IR+ D ND +P + F+ V D +GR+ A D D
Sbjct: 1142 VQATSAPLVSRATVHIRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPD 1201
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALD 162
+ + ++ VV+ +G++R ++ LD
Sbjct: 1202 VSDHLFYSFERGNELQLLVVNQTSGELRLSRKLD 1235
>gi|355559659|gb|EHH16387.1| hypothetical protein EGK_11661, partial [Macaca mulatta]
Length = 3211
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 85/176 (48%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQ--GP 75
Y A R+ +++V ATD+D GLV Y ++ N+ +F +D T E Q P
Sbjct: 541 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRG--HFAIDSLTGEIQVVAP 598
Query: 76 I--------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ QD G ++T +I+V DIND P F S P++ SV E G
Sbjct: 599 LDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSVLENAPLG 658
Query: 118 LAVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+V + A DAD G+NA + YS V D PFV+++ TG + + LD E + Y
Sbjct: 659 HSVIHIQAVDADHGENARLEYSLTGVASDTPFVINSATGWVSVSGPLDRESVEHYF 714
Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQG 74
+++Q+ ATD+D+ G V+Y N D F ++P + E
Sbjct: 970 SVLQISATDRDAHANGRVQYTF-QNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTA 1028
Query: 75 PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G L + ++ + V D+ND P F + +E V E G V ++ A D DEG
Sbjct: 1029 YAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDEG 1088
Query: 132 QNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE +Q Y+
Sbjct: 1089 PNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYV 1130
Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 32/185 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL---DNNTDAASYFNLDPAT----- 70
Y R+ E G ++Q++ATD D+ + YR + AA+ F +DP +
Sbjct: 429 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLIST 488
Query: 71 ------EH------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH QG Q+ G S+T V+I V D ND P+F Y V
Sbjct: 489 SGRVDREHMESYELVVEASDQG--QEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVR 546
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E + V RV ATD D+ N +V+Y++ F +D+ TG+I+ LD+E ++
Sbjct: 547 EDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVVAPLDFEAERE 606
Query: 169 YLERV 173
Y R+
Sbjct: 607 YALRI 611
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V+I +TD N P FQS Y SV E + G + + A+D D G+NA + Y + +++P
Sbjct: 835 VHINITDANTHRPVFQSAHYSVSVNEDRPVGSTIVVISASDDDVGENARITYLLEDNLPQ 894
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DA++G I LDYE Q Y
Sbjct: 895 FRIDADSGAITLQAPLDYEDQVTY 918
Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 29/180 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT------- 70
Y + + G +++V A D D+G+ G + Y L N+ + F++DP +
Sbjct: 321 YQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 380
Query: 71 --------EH--QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
H + QD G LS+T V + V D ND +P F+ Y ++ E ++G
Sbjct: 381 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRENVEEG 440
Query: 118 LAVGRVHATDADEGQNAVVYY--------SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ ++ ATD D NA + Y F +D +G I T+ +D E + Y
Sbjct: 441 YPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESY 500
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEH 72
S Y + +G T++ + A+D D G+ + Y L DN F +D A
Sbjct: 851 SAHYSVSVNEDRPVGSTIVVISASDDDVGENARITYLLEDN----LPQFRIDADSGAITL 906
Query: 73 QGPIQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQD 116
Q P+ E ++ T + R V D+ND P+F + Y V E
Sbjct: 907 QAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAP 966
Query: 117 GL-AVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ++ ATD D N V Y+ D F ++ +G +RT + LD E +Y
Sbjct: 967 PFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVY 1024
Score = 43.9 bits (102), Expect = 0.032, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 70/176 (39%), Gaps = 28/176 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI--------- 76
LG +++ ++A D D G+ +EY L +D F ++ AT GP+
Sbjct: 657 LGHSVIHIQAVDADHGENARLEYSLTGVASDTP--FVINSATGWVSVSGPLDRESVEHYF 714
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDAD 129
+D G LS++A+V + V D+ND PEF Y + E + V T D
Sbjct: 715 FGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNE-DAAVGTSVVSVTAVD 773
Query: 130 EGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
N+ + Y + G + LDY KQ+ Y + V S A
Sbjct: 774 RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLDY-KQERYFKLVLTASDRA 828
Score = 41.2 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 99 NPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDAN 151
+P+F Y+ VPE + G AV RV A D D G+ + YS+ + F +D
Sbjct: 313 HPQFPQYNYQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQ 372
Query: 152 TGDIRTNKALDYEKQQLYLERV 173
+G IRT ALD E + + RV
Sbjct: 373 SGLIRTAAALDRESMERHYLRV 394
Score = 37.4 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 20/154 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPI- 76
+G + Q+ A D D G + Y++++ N + + +LD + I
Sbjct: 1073 VGSVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIV 1132
Query: 77 --QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFS--VPEGQDGLA---VGRVHATDAD 129
L S ATV++R+ D ND +P + F+ V D +GR+ A D D
Sbjct: 1133 VQATSAPLVSRATVHVRLIDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPD 1192
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALD 162
+ + ++ VV+ +G++R ++ LD
Sbjct: 1193 VSDHLFYSFERGNELQLLVVNQTSGELRLSRKLD 1226
>gi|145309304|ref|NP_001398.2| cadherin EGF LAG seven-pass G-type receptor 3 precursor [Homo
sapiens]
gi|229462826|sp|Q9NYQ7.2|CELR3_HUMAN RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 3;
AltName: Full=Cadherin family member 11; AltName:
Full=Epidermal growth factor-like protein 1;
Short=EGF-like protein 1; AltName: Full=Flamingo homolog
1; Short=hFmi1; AltName: Full=Multiple epidermal growth
factor-like domains protein 2; Short=Multiple EGF-like
domains protein 2; Flags: Precursor
Length = 3312
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 85/176 (48%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQ--GP 75
Y A R+ +++V ATD+D GLV Y ++ N+ +F +D T E Q P
Sbjct: 550 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRG--HFAIDSLTGEIQVVAP 607
Query: 76 I--------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ QD G ++T +I+V DIND P F S P++ SV E G
Sbjct: 608 LDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSVLENAPLG 667
Query: 118 LAVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+V + A DAD G+NA + YS V D PFV+++ TG + + LD E + Y
Sbjct: 668 HSVIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATGWVSVSGPLDRESVEHYF 723
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQG 74
+++Q+ ATD+D+ G V+Y N D F ++P + E
Sbjct: 979 SVLQISATDRDAHANGRVQYTF-QNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTA 1037
Query: 75 PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G L + ++ + V D+ND P F + +E V E G V ++ A D DEG
Sbjct: 1038 YAVDRGVPPLRTPVSIQVMVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDEG 1097
Query: 132 QNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE +Q Y+
Sbjct: 1098 PNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYV 1139
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 32/185 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL---DNNTDAASYFNLDPAT----- 70
Y R+ E G ++Q++ATD D+ + YR + AA+ F +DP +
Sbjct: 438 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLIST 497
Query: 71 ------EH------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH QG Q+ G S+T V+I V D ND P+F Y V
Sbjct: 498 SGRVDREHMESYELVVEASDQG--QEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVR 555
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E + V RV ATD D+ N +V+Y++ F +D+ TG+I+ LD+E ++
Sbjct: 556 EDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVVAPLDFEAERE 615
Query: 169 YLERV 173
Y R+
Sbjct: 616 YALRI 620
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V+I +TD N P FQS Y SV E + G + + A+D D G+NA + Y + +++P
Sbjct: 844 VHINITDANTHRPVFQSAHYSVSVNEDRPMGSTIVVISASDDDVGENARITYLLEDNLPQ 903
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DA++G I LDYE Q Y
Sbjct: 904 FRIDADSGAITLQAPLDYEDQVTY 927
Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEH 72
S Y + +G T++ + A+D D G+ + Y L DN F +D A
Sbjct: 860 SAHYSVSVNEDRPMGSTIVVISASDDDVGENARITYLLEDN----LPQFRIDADSGAITL 915
Query: 73 QGPIQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQD 116
Q P+ E ++ T + R V D+ND P+F + Y V E
Sbjct: 916 QAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAP 975
Query: 117 GL-AVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ++ ATD D N V Y+ D F ++ +G +RT + LD E +Y
Sbjct: 976 PFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVY 1033
Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 29/180 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT------- 70
Y + + G +++V A D D+G+ G + Y L N+ + F++DP +
Sbjct: 330 YQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 389
Query: 71 --------EHQGPI--QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
H + QD G LS+T V + V D ND +P F+ Y ++ E ++G
Sbjct: 390 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRENVEEG 449
Query: 118 LAVGRVHATDADEGQNAVVYY--------SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ ++ ATD D NA + Y F +D +G I T+ +D E + Y
Sbjct: 450 YPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESY 509
Score = 43.1 bits (100), Expect = 0.050, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 69/176 (39%), Gaps = 28/176 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI--------- 76
LG +++ ++A D D G+ +EY L D F ++ AT GP+
Sbjct: 666 LGHSVIHIQAVDADHGENARLEYSLTGVAPDTP--FVINSATGWVSVSGPLDRESVEHYF 723
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDAD 129
+D G LS++A+V + V D+ND PEF Y + E + V T D
Sbjct: 724 FGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNE-DAAVGTSVVSVTAVD 782
Query: 130 EGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
N+ + Y + G + LDY KQ+ Y + V S A
Sbjct: 783 RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLDY-KQERYFKLVLTASDRA 837
Score = 41.2 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 99 NPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDAN 151
+P+F Y+ VPE + G AV RV A D D G+ + YS+ + F +D
Sbjct: 322 HPQFPQYNYQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQ 381
Query: 152 TGDIRTNKALDYEKQQLYLERV 173
+G IRT ALD E + + RV
Sbjct: 382 SGLIRTAAALDRESMERHYLRV 403
Score = 37.7 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 20/154 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPI- 76
+G + Q+ A D D G + Y++++ N + + +LD + I
Sbjct: 1082 VGSVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIV 1141
Query: 77 --QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFS--VPEGQDGLA---VGRVHATDAD 129
L S ATV++R+ D ND +P + F+ V D +GR+ A D D
Sbjct: 1142 VQATSAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPD 1201
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALD 162
+ + ++ VV+ +G++R ++ LD
Sbjct: 1202 VSDHLFYSFERGNELQLLVVNQTSGELRLSRKLD 1235
>gi|449500407|ref|XP_002196414.2| PREDICTED: protocadherin-23 [Taeniopygia guttata]
Length = 3244
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 78/172 (45%), Gaps = 30/172 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD--NNTDAASYFNLDPATEHQGPI 76
Y A + G L+QVKATD D+ +FG +EY L D N + + F +DP H G I
Sbjct: 567 YRARLPEHAARGRRLLQVKATDADADQFGEIEYSLYDGFNFYEKSKAFQIDP---HTGQI 623
Query: 77 ---------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEG 114
+D GGLS A V I + DIND P F+ Y S+
Sbjct: 624 FVSQDIDREEDQTTYDLLVKAKDGGGLSGQAFVRIEIEDINDNQPVFEQDIYVTSISSHT 683
Query: 115 QDGLAVGRVHATDADEGQNAVVYYS-VPEDIP--FVVDANTGDIRTNKALDY 163
Q G + V ATD D G +V Y VP + F VDA+TG I AL +
Sbjct: 684 QPGAEIINVVATDRDSGIFGIVTYELVPGEFSSFFTVDASTGIIYLTSALGH 735
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 25/171 (14%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ---------- 77
E+G + + A D D G+ G V Y +L N + A F LD T Q
Sbjct: 1497 EVGCLVHHIIAKDPDEGRNGQVTYHILSGNENKA--FVLDKITGLLTTAQFLDREVQECY 1554
Query: 78 -------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
D+G LS+T + I V D+ND+ P F YE +V E +D G V RV A D
Sbjct: 1555 SLTVIALDDGSPALSATQVLTIIVLDVNDETPRFLKQLYETAVHENRDPGEFVIRVEAVD 1614
Query: 128 ADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D G N+++ Y + P F +++++G++ T +LD E Q+++ +V +
Sbjct: 1615 RDAGLNSLLQYEILPGPGYEKFKMNSDSGELVTAASLDRETQEVFNIKVLV 1665
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 74/162 (45%), Gaps = 30/162 (18%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------------- 82
V+A D D+G G + Y+++ N YF L+ + G + L
Sbjct: 1714 VRAVDMDAGNNGALRYKIIGGNI--GEYFILNNTS---GKLLITRSLDREDISNFTLVIE 1768
Query: 83 ---------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQ 132
SS+A + + V D ND +P F Y+ SV E ++G A+ + A+D D G
Sbjct: 1769 CHDLGSPSKSSSAQLYLTVLDENDHSPLFAKTQYQISVTEDLEEGSAILDLSASDEDAGL 1828
Query: 133 NAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLER 172
N V YS+ +D F +D+ TG I T KALD E + Y R
Sbjct: 1829 NGEVMYSLIDDTYGAFAIDSVTGSIITTKALDREIKSQYTFR 1870
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 72/163 (44%), Gaps = 24/163 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------EHQG--- 74
G ++ V ATD+DSG FG+V Y L+ + +S+F +D +T H
Sbjct: 686 GAEIINVVATDRDSGIFGIVTYELVPG--EFSSFFTVDASTGIIYLTSALGHLAHSALFL 743
Query: 75 --PIQDEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDAD 129
+D GGL +S A V + + F+ Y FSVPE + +G V A +
Sbjct: 744 TISARDGGGLPSASNAAVTVNILKTVLAPAIFERSRYSFSVPEDAPEDSVIGTVKAREPP 803
Query: 130 EGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYL 170
AV Y D F VD G IRT K LD+E Q + +
Sbjct: 804 NSLEAVSYRICSGDPHGKFSVDPQFGIIRTKKQLDHEAQSVVV 846
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 20/167 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN--------NTDAASYF---NL 66
Y + + G +++V+A D+D+G L++Y +L N+D+ +L
Sbjct: 1592 LYETAVHENRDPGEFVIRVEAVDRDAGLNSLLQYEILPGPGYEKFKMNSDSGELVTAASL 1651
Query: 67 DPATEHQGPIQ----DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
D T+ I+ D G LSST TV V D ND +P F P E +PE Q V
Sbjct: 1652 DRETQEVFNIKVLVWDSGTPSLSSTVTVICTVLDENDHSPTFLLPPSEIFIPENQQLSVV 1711
Query: 121 GRVHATDADEGQNAVVYYS-VPEDIP--FVVDANTGDIRTNKALDYE 164
V A D D G N + Y + +I F+++ +G + ++LD E
Sbjct: 1712 YIVRAVDMDAGNNGALRYKIIGGNIGEYFILNNTSGKLLITRSLDRE 1758
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 83/178 (46%), Gaps = 21/178 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-----------ASYFNL 66
+Y A + ++QV ATD DSG G EY ++ N +A A+ L
Sbjct: 2116 YYKASVWEGQSPKTDIVQVFATDLDSGLNGETEYSIVSGNENATFLIDSVRGILAANTGL 2175
Query: 67 DPAT--EHQGPIQ--DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLA 119
D T ++ +Q D+G LS+TA V I+V D+ND P Q L E VPE G
Sbjct: 2176 DYETTSSYRLVVQAADKGNPRLSATAIVRIQVLDVNDNVPVVQPLG-EVEVPENTLPGFI 2234
Query: 120 VGRVHATDADE--GQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
V +V A+DAD + Y ++ F ++ +TG I LD+E+ +Y + +
Sbjct: 2235 VTQVSASDADSRPALHFGFIYDNSSEMKFAINQHTGVIIVVGPLDFEETAVYTLHIIV 2292
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---PEDI 144
V + + DIND +P F S P + + + + G V + A D DEG+N V Y + E+
Sbjct: 1470 VKVVILDINDNSPSFMSSPLSYVMEDVEVGCLVHHIIAKDPDEGRNGQVTYHILSGNENK 1529
Query: 145 PFVVDANTGDIRTNKALDYEKQQLY 169
FV+D TG + T + LD E Q+ Y
Sbjct: 1530 AFVLDKITGLLTTAQFLDREVQECY 1554
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 32/153 (20%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDI 95
+ A DKDSG+ G + Y LL + YF ++ S + + T+
Sbjct: 1113 ITAVDKDSGRNGQLSYFLLSD----GKYFKMN----------------SNTVIEVMSTEC 1152
Query: 96 NDKNPEFQSLPY------EFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV--PEDIP- 145
N ++ +SL +V EGQ G V + A D D G N VV YS+ EDI
Sbjct: 1153 NTRDQSMESLKEGNPSRDTGTVLEGQPSGTLVTTIFAKDFDSGNNGVVLYSIESEEDIGY 1212
Query: 146 FVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
F +DA +G++RT + L + ++ Y R+ +I+K
Sbjct: 1213 FQIDAVSGELRTTRPLSHAERSNY--RMMVIAK 1243
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 58/121 (47%), Gaps = 10/121 (8%)
Query: 48 LVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPY 107
LV LD T AAS+ + A++H P L+STATV I V D+ND P F S Y
Sbjct: 2489 LVLSSALDRET-AASHQLVLLASDHGTP-----SLNSTATVLITVLDVNDNPPVFSSSEY 2542
Query: 108 EFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDY 163
V E G + V A D D G NA + Y++ F +D TG + + LDY
Sbjct: 2543 HVHVKESIPIGSHITEVSAKDCDAGTNAEITYAIISGNDRGYFGLDGRTGSVNLTEMLDY 2602
Query: 164 E 164
E
Sbjct: 2603 E 2603
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV---PED 143
V + + D+ND P+F+ Y+ SV EGQ + +V ATD D G N YS+ E+
Sbjct: 2098 VTVLIQDVNDNAPKFEQSYYKASVWEGQSPKTDIVQVFATDLDSGLNGETEYSIVSGNEN 2157
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLY 169
F++D+ G + N LDYE Y
Sbjct: 2158 ATFLIDSVRGILAANTGLDYETTSSY 2183
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVP- 141
S+ VNI VTDIND P F + + ++ Q G AV HA D D G N + YS+
Sbjct: 860 SSTQVNISVTDINDNPPVFLTKSDKVTISHTQLPGTAVYIAHAEDKDSGLNGAIKYSIAS 919
Query: 142 -EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ F +D + G + + + EKQQ Y
Sbjct: 920 KQSDAFSIDPSLGVVNLTRTVLAEKQQEY 948
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE--GQNAVVYY 138
LS+ + +RV D+ND+ P F Y +V E G AV R+ A+DADE NA V Y
Sbjct: 434 LSAEEPLLLRVADLNDETPAFPQPHYRAAVSEAASPGTAVLRLSASDADEPGSPNAEVRY 493
Query: 139 SVPEDIPFV----VDANTGDIRTNKALDYEKQQLYLERV 173
++ D + +DA +G + T LD E+Q RV
Sbjct: 494 ALEGDAAALALLRIDARSGAVSTRARLDRERQAALELRV 532
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAV 135
+D+G +T TV + + ++ +P F Y F++PE Q G +GRV A+D+D G + V
Sbjct: 2729 KDKGDSLTTTTVQVDIEGRDEFDPVFTQEHYFFNLPEKNQAGQLIGRVTASDSDGGLDGV 2788
Query: 136 VYYSVPEDIPFV-VDANTGDIRTNKALDYEKQQL 168
V+YS+ + PF V+ +G+I + + K +
Sbjct: 2789 VHYSLLKPSPFFSVNQTSGNIYLTQTVHRRKNGI 2822
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPE---- 142
V++RV D ND P F Y + E G AV R+ ATD D G N V Y++
Sbjct: 215 VSVRVLDENDNAPAFSRGEYRARLREDAPPGTAVCRLRATDPDLGANGEVRYAINRRQSD 274
Query: 143 -DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F V+ +G +R + LD E + L+
Sbjct: 275 PDGYFAVEERSGVLRLRRPLDREARALH 302
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 28/177 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLDPAT------- 70
Y A + G ++++ A+D D E R L+ + A + +D +
Sbjct: 459 YRAAVSEAASPGTAVLRLSASDADEPGSPNAEVRYALEGDAAALALLRIDARSGAVSTRA 518
Query: 71 ----EHQGPIQ-----DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDG 117
E Q ++ +GG+ ++ +++RV D ND P F Y +PE G
Sbjct: 519 RLDRERQAALELRVVARDGGVPPRAAACRLSVRVEDANDNEPRFARAVYRARLPEHAARG 578
Query: 118 LAVGRVHATDADEGQNAVVYYSV-------PEDIPFVVDANTGDIRTNKALDYEKQQ 167
+ +V ATDAD Q + YS+ + F +D +TG I ++ +D E+ Q
Sbjct: 579 RRLLQVKATDADADQFGEIEYSLYDGFNFYEKSKAFQIDPHTGQIFVSQDIDREEDQ 635
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 74/171 (43%), Gaps = 30/171 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EH 72
G + A DKDSG G ++Y + +DA F++DP+
Sbjct: 894 GTAVYIAHAEDKDSGLNGAIKYSIASKQSDA---FSIDPSLGVVNLTRTVLAEKQQEYTL 950
Query: 73 QGPIQDEGG--LSSTATVNIRVTDINDKNPE--FQSLPYEFSVPEGQD-GLAVGRV--HA 125
Q +D G L+S T+ + + + + P FQSL Y+ V E G V +V H+
Sbjct: 951 QIAAEDCGSPPLTSLLTLTVAIEE-QEMGPTLVFQSLVYQVEVSEATSPGAQVLQVQAHS 1009
Query: 126 TDADEGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
D + ++Y P + + F + +++G I K L+YE Q+ R F
Sbjct: 1010 PDPHSVTSNLIYSLEPSTDSVAFGISSDSGWIYLRKHLNYEYTQMLSFRAF 1060
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 70/183 (38%), Gaps = 34/183 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y ++ +G + +V A D D+G + Y ++ N YF LD T
Sbjct: 2542 YHVHVKESIPIGSHITEVSAKDCDAGTNAEITYAIISGNDRG--YFGLDGRTGSVNLTEM 2599
Query: 71 -EHQGPIQ-------DEGGLS----STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
+++ ++ +GG + A V + V D ND P F +V E
Sbjct: 2600 LDYEDTMKFTLVIQATDGGTDVKNMAFAVVLVSVLDDNDYAPLFLFPSLSCTVSENLPTF 2659
Query: 119 A-VGRVHATDADEGQNAVVYYSVPEDI-----------PFVVDANTGDIRTNKALDYEKQ 166
+ V V A D D+G + YS+ F +D TGDI T + DYE Q
Sbjct: 2660 SFVCAVCALDFDKGSYGHLTYSIQSSCLAHREAAGDRDMFFIDPLTGDIHTKQMFDYESQ 2719
Query: 167 QLY 169
Y
Sbjct: 2720 NRY 2722
>gi|7407146|gb|AAF61929.1|AF231023_1 protocadherin Flamingo 1 [Homo sapiens]
Length = 3312
Score = 70.9 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 85/176 (48%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQ--GP 75
Y A R+ +++V ATD+D GLV Y ++ N+ +F +D T E Q P
Sbjct: 550 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRG--HFAIDSLTGEIQVVAP 607
Query: 76 I--------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ QD G ++T +I+V DIND P F S P++ SV E G
Sbjct: 608 LDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSVLENAPLG 667
Query: 118 LAVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+V + A DAD G+NA + YS V D PFV+++ TG + + LD E + Y
Sbjct: 668 HSVIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATGWVSVSGPLDRESVEHYF 723
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQG 74
+++Q+ ATD+D+ G V+Y N D F ++P + E
Sbjct: 979 SVLQISATDRDAHANGRVQYTF-QNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTA 1037
Query: 75 PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G L + ++ + V D+ND P F + +E V E G V ++ A D DEG
Sbjct: 1038 YAVDRGVPPLRTPVSIQVMVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDEG 1097
Query: 132 QNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE +Q Y+
Sbjct: 1098 PNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYV 1139
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 32/185 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL---DNNTDAASYFNLDPAT----- 70
Y R+ E G ++Q++ATD D+ + YR + AA+ F +DP +
Sbjct: 438 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLIST 497
Query: 71 ------EH------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH QG Q+ G S+T V+I V D ND P+F Y V
Sbjct: 498 SGRVDREHMESYELVVEASDQG--QEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVR 555
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E + V RV ATD D+ N +V+Y++ F +D+ TG+I+ LD+E ++
Sbjct: 556 EDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVVAPLDFEAERE 615
Query: 169 YLERV 173
Y R+
Sbjct: 616 YALRI 620
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V+I +TD N P FQS Y SV E + G + + A+D D G+NA + Y + +++P
Sbjct: 844 VHINITDANTHRPVFQSAHYSVSVNEDRPMGSTIVVISASDDDVGENARITYLLEDNLPQ 903
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DA++G I LDYE Q Y
Sbjct: 904 FRIDADSGAITLQAPLDYEDQVTY 927
Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEH 72
S Y + +G T++ + A+D D G+ + Y L DN F +D A
Sbjct: 860 SAHYSVSVNEDRPMGSTIVVISASDDDVGENARITYLLEDN----LPQFRIDADSGAITL 915
Query: 73 QGPIQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQD 116
Q P+ E ++ T + R V D+ND P+F + Y V E
Sbjct: 916 QAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAP 975
Query: 117 GL-AVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ++ ATD D N V Y+ D F ++ +G +RT + LD E +Y
Sbjct: 976 PFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVY 1033
Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 29/180 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT------- 70
Y + + G +++V A D D+G+ G + Y L N+ + F++DP +
Sbjct: 330 YQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 389
Query: 71 --------EHQGPI--QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
H + QD G LS+T V + V D ND +P F+ Y ++ E ++G
Sbjct: 390 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRENVEEG 449
Query: 118 LAVGRVHATDADEGQNAVVYY--------SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ ++ ATD D NA + Y F +D +G I T+ +D E + Y
Sbjct: 450 YPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESY 509
Score = 43.1 bits (100), Expect = 0.052, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 69/176 (39%), Gaps = 28/176 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI--------- 76
LG +++ ++A D D G+ +EY L D F ++ AT GP+
Sbjct: 666 LGHSVIHIQAVDADHGENARLEYSLTGVAPDTP--FVINSATGWVSVSGPLDRESVEHYF 723
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDAD 129
+D G LS++A+V + V D+ND PEF Y + E + V T D
Sbjct: 724 FGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNE-DAAVGTSVVSVTAVD 782
Query: 130 EGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
N+ + Y + G + LDY KQ+ Y + V S A
Sbjct: 783 RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLDY-KQERYFKLVLTASDRA 837
Score = 41.2 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 99 NPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDAN 151
+P+F Y+ VPE + G AV RV A D D G+ + YS+ + F +D
Sbjct: 322 HPQFPQYNYQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQ 381
Query: 152 TGDIRTNKALDYEKQQLYLERV 173
+G IRT ALD E + + RV
Sbjct: 382 SGLIRTAAALDRESMERHYLRV 403
Score = 37.7 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 20/154 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPI- 76
+G + Q+ A D D G + Y++++ N + + +LD + I
Sbjct: 1082 VGSVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIV 1141
Query: 77 --QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFS--VPEGQDGLA---VGRVHATDAD 129
L S ATV++R+ D ND +P + F+ V D +GR+ A D D
Sbjct: 1142 VQATSAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPD 1201
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALD 162
+ + ++ VV+ +G++R ++ LD
Sbjct: 1202 VSDHLFYSFERGNELQLLVVNQTSGELRLSRKLD 1235
>gi|242014336|ref|XP_002427847.1| protocadherin-16 precursor, putative [Pediculus humanus corporis]
gi|212512316|gb|EEB15109.1| protocadherin-16 precursor, putative [Pediculus humanus corporis]
Length = 5078
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 23/176 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN--------LD 67
+L + + + +G T++ +KATD D G G+VEY++ N D+ + N L
Sbjct: 3139 ALSFQVIIPENDPVGSTILTIKATDDDDGPNGMVEYKISSGNEDSKFHLNSTTGALKILK 3198
Query: 68 P------ATEHQGPIQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
P + H + G +TA V I +TD+ND P F Y+ +PE
Sbjct: 3199 PLDYDTVSNYHLNVTATDLGFEPHQATAMVTISLTDVNDNPPTFNQSVYKAYIPENSPPK 3258
Query: 119 A-VGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ +V A D D +NA+++YS+ +D+ F +D+ TG I + LDYE++ Y
Sbjct: 3259 TFIFQVQAHDIDSPKNAIIHYSIIRGTGKDV-FTIDSKTGTIFSKSRLDYEEKDEY 3313
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 24/171 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QG 74
+ + E+G +++V ++D+D G+ Y +N + F+LDP + + G
Sbjct: 2822 LFSVNVTENAEIGSFVIRVTSSDQDIGENANATYSFTEN---PGNKFSLDPLSGNVTVAG 2878
Query: 75 PI----QDE---------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-V 120
P+ QDE G S + I + D ND PEF+ Y F+ PE Q + V
Sbjct: 2879 PLDRETQDEYLLKVAAFDGAWRSETPLTITIQDQNDNAPEFEHFDYSFNFPESQSSVIFV 2938
Query: 121 GRVHATDADE-GQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQL 168
G+V ATD D+ G N+V+ YS+ P DI F +D +G+I + + L Y+ L
Sbjct: 2939 GQVIATDRDKHGANSVISYSLKHPSDI-FTIDPASGEIFSKRPLRYKYTAL 2988
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 58/121 (47%), Gaps = 8/121 (6%)
Query: 58 TDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD- 116
T + +L+ G I+ L A VN+ + D+ND P F + PY+ + EG
Sbjct: 1189 TTGKGFISLEAVVHDNGQIK----LKDKAAVNVFIDDLNDNPPVFLTTPYKVQISEGSTL 1244
Query: 117 GLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V RV+ATD DEG N VYYS+ E+ F ++ TG I K LD E Y+ V
Sbjct: 1245 ETQVLRVYATDIDEGVNGEVYYSIAMGNEEQKFSIEQGTGQITLIKDLDRETTSRYVLTV 1304
Query: 174 F 174
Sbjct: 1305 I 1305
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 73/162 (45%), Gaps = 21/162 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------ 76
L ++ +KA DKD G+ +EY L D T S +D G +
Sbjct: 2092 LNTVVLAIKAIDKDEGRNSYLEYSLYDP-TKTFSVGTIDGLLRVVGKLDRETVANYSLEV 2150
Query: 77 --QDEGGLSSTATVNI--RVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+D+G NI V D ND +P F Y S+ E G +V +V ATD DEG
Sbjct: 2151 VAKDKGDPPRYTKQNIFVNVVDENDNSPMFDPKHYSASIAENASIGASVLQVSATDVDEG 2210
Query: 132 QNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
N V YS+ E+ F + +TG +R K L++E++ YL
Sbjct: 2211 LNGKVRYSIFSGDENRDFSISEDTGVVRVAKNLNFERKPRYL 2252
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 84/185 (45%), Gaps = 31/185 (16%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL--DNNTD-----------AA 61
D Y A + +G +++QV ATD D G G V Y + D N D A
Sbjct: 2181 DPKHYSASIAENASIGASVLQVSATDVDEGLNGKVRYSIFSGDENRDFSISEDTGVVRVA 2240
Query: 62 SYFNLDPATEHQGPIQDEGGLSS--------TATVNIRVTDINDKNPEFQSLPY-----E 108
N + + ++ E ++ TAT++I V DIND P F PY E
Sbjct: 2241 KNLNFERKPRYLLTVRAEDSSNNDDDNIRYDTATMSIIVRDINDNPPVFLDSPYYAYVME 2300
Query: 109 FSVPEGQDGLAVGRVHATDADEGQ-NAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEK 165
+VP DG + V A+DAD Q N V Y + E F ++A+TGD+ ++ LD EK
Sbjct: 2301 NTVPS-PDGYFL-TVRASDADSPQYNGQVRYFLKEGDAGLFRINASTGDLYLSRPLDREK 2358
Query: 166 QQLYL 170
Q YL
Sbjct: 2359 QSEYL 2363
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDI 144
A V I VTD ND P F Y F VPE G VG + ATD DEG N V Y V D
Sbjct: 1850 AIVKIFVTDTNDNPPVFSDNAYSFDVPENTIRGTRVGEIMATDEDEGINGQVSYQVISDW 1909
Query: 145 P---FVVDANTGDIRTNKALDYEKQQLYL 170
F +++ +G LDYE+ Q Y+
Sbjct: 1910 ANDVFSLNSQSGVFTLTTRLDYEEVQHYI 1938
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 78/168 (46%), Gaps = 32/168 (19%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDNNTDA----------------------ASYFNLDP 68
+ + +KATD DS + G + YRL+ N++D ASY
Sbjct: 2732 LKVCTIKATDLDSEQNGEISYRLI-NDSDGTFSIDEKNGDIFTEVKLDRESIASYTLTVE 2790
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
A +H P L+STATV + V D ND P F L + +V E + G V RV ++D
Sbjct: 2791 AFDHGNP-----QLTSTATVLVNVLDKNDNPPRFTRL-FSVNVTENAEIGSFVIRVTSSD 2844
Query: 128 ADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERV 173
D G+NA YS E+ F +D +G++ LD E Q YL +V
Sbjct: 2845 QDIGENANATYSFTENPGNKFSLDPLSGNVTVAGPLDRETQDEYLLKV 2892
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA-------------SYFNLDP-------- 68
G L+ A DKD+G+ G ++Y ++ N D SY NL+
Sbjct: 163 GTRLLLDSAFDKDAGQNGELDYNIVGGNKDQKFRINITSNPSGEMSYLNLETTGNLDRET 222
Query: 69 -ATEHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRV 123
A H +GG L VN+ + D+ND P F Y S+ E G +V +V
Sbjct: 223 RAFYHLNISAKDGGDPPLYGYLQVNVTILDVNDNPPMFDHSDYNVSLNESVPPGTSVLQV 282
Query: 124 HATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQ 167
ATD D G NA + Y++ EDI F +D TG I T + L +QQ
Sbjct: 283 RATDNDAGDNAKITYNL-EDIGHQFSIDPETGVISTVEPLKCVRQQ 327
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 73/165 (44%), Gaps = 30/165 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------EHQGPI- 76
G + ++ ATD+D G G V Y+++ + A F+L+ + E Q I
Sbjct: 1882 GTRVGEIMATDEDEGINGQVSYQVISDW--ANDVFSLNSQSGVFTLTTRLDYEEVQHYIF 1939
Query: 77 ----QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
QD G LSST TV V D+ND P F + Y V E G V V ATD D
Sbjct: 1940 VVQAQDSGKPSLSSTLTVYFNVIDLNDNAPLFDPMSYNNEVFENVTIGTNVVTVSATDLD 1999
Query: 130 EGQNAVVYYSV-----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
GQN + Y + ED+ AN G I T K LD E + Y
Sbjct: 2000 SGQNGAIEYKIISGDENEDLAI---ANNGTIYTVKELDRETKSAY 2041
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL--DNNTDAA----------- 61
D + Y + +G ++ V ATD DSG+ G +EY+++ D N D A
Sbjct: 1972 DPMSYNNEVFENVTIGTNVVTVSATDLDSGQNGAIEYKIISGDENEDLAIANNGTIYTVK 2031
Query: 62 -------SYFNL-DPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
S +NL T+ P Q LSST V I + D+ND +PEF + P + SV E
Sbjct: 2032 ELDRETKSAYNLVVTGTDLAEPPQQR--LSSTVQVTIVLKDVNDMSPEFIT-PTKTSVSE 2088
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
V + A D DEG+N+ + YS+ + F V G +R LD E
Sbjct: 2089 NIPLNTVVLAIKAIDKDEGRNSYLEYSLYDPTKTFSVGTIDGLLRVVGKLDRE 2141
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 27/162 (16%)
Query: 33 LMQVKATD-KDSGKFGLVEYRLLDNNTDAASYFNLDPAT------EHQGPIQ-------- 77
++QVKATD +D G ++Y + N ++YFN++ T P++
Sbjct: 3049 ILQVKATDEQDFGMNAEIDYSISGGN--GSNYFNINEKTGWLTVSRANIPVKVLSRYVIN 3106
Query: 78 ----DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
D G LS A V + VT N +P F +L ++ +PE G + + ATD D+
Sbjct: 3107 VKATDRGVPPLSDEAQVTLVVTGENLYSPVFPALSFQVIIPENDPVGSTILTIKATDDDD 3166
Query: 131 GQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G N +V Y + ED F +++ TG ++ K LDY+ Y
Sbjct: 3167 GPNGMVEYKISSGNEDSKFHLNSTTGALKILKPLDYDTVSNY 3208
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 78/175 (44%), Gaps = 33/175 (18%)
Query: 28 ELGVTLMQ----------VKATDKDSGKFGLVEYRL----------------LDNNTDAA 61
++ VTL++ + A+D D G G V Y L L
Sbjct: 597 QINVTLLEDTPPNTLVAILTASDSDQGTNGSVAYFLDAEFSPKYSGPFALDSLTGQLTTK 656
Query: 62 SYFN--LDPATEHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QD 116
SY + + P E + +D+G SSTA VN+ V D+ND +PEF L Y V E
Sbjct: 657 SYLDREITPYYEIKVIAKDQGVPPRSSTAVVNLFVEDVNDNSPEFYPLKYFTIVSENIAT 716
Query: 117 GLAVGRVHATDADEGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G V +V A D DEG+N+ + YS+ D F ++ TG+I +L + L+
Sbjct: 717 GNKVLQVFAHDLDEGKNSELKYSIESGHDDLFNINPKTGEIHVLSSLKQTPKGLF 771
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
LS + TV + V D+ND +P F+ Y S+ E G V + ATD D+G NA + YS
Sbjct: 2376 LSGSGTVRVIVQDVNDHSPVFERQSYVASIMENSPIGYFVTQPVATDQDDGLNAKIKYSF 2435
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLYL 170
D F ++ NTG I T LD E+ +Y
Sbjct: 2436 FGDKADRFHLEENTGVITTATILDREETSIYF 2467
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 69/156 (44%), Gaps = 30/156 (19%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAA--------------------SYFNLDPATEH 72
++ A+D D G GLV Y + + N + Y++L
Sbjct: 1035 FFRLVASDADLGLNGLVSYEISEGNFEGKFGIFPDGYLYVKSSLDREERDYYSLIVTARD 1094
Query: 73 QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ--DGLAVGRVHATDADE 130
G E SST +V I V D ND PEF + + F V E + D VG++ ATD D
Sbjct: 1095 SG----EPSRSSTVSVVIHVIDENDNPPEFTNSTFTFHVLENEPPDSF-VGKLSATDRDI 1149
Query: 131 GQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYE 164
G+NA + +S P++ F++D G ++T D E
Sbjct: 1150 GRNAELIFSFANPQN-EFIIDPKNGFVKTLIVFDRE 1184
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 30/160 (18%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI----------QDEGGL 82
+ QV+A D DS K ++ Y ++ F +D T G I +DE L
Sbjct: 3261 IFQVQAHDIDSPKNAIIHYSIIRGT--GKDVFTIDSKT---GTIFSKSRLDYEEKDEYSL 3315
Query: 83 SSTAT-----------VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
A V + VT +N+ P+F + + F + E + G +VG + ATD D
Sbjct: 3316 EILAANPDSPMFGSTKVIVYVTGVNEFYPKFVTPVFHFEISESSEVGTSVGTIQATDEDA 3375
Query: 131 GQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQ 167
G + VYY D F + + TG I ++ LD E Q
Sbjct: 3376 GDDGKVYYLFVGSSNDKGFSIGSETGTILVSRRLDRETQN 3415
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 72/175 (41%), Gaps = 26/175 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y + L +++V ATD D G G V Y + N + F+++ T I+D
Sbjct: 1234 YKVQISEGSTLETQVLRVYATDIDEGVNGEVYYSIAMGNEEQK--FSIEQGTGQITLIKD 1291
Query: 79 --------------------EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ LS + TV I + D ND PEF +E SVPE
Sbjct: 1292 LDRETTSRYVLTVIAEDGAVQNKLSVSTTVVIDILDENDNAPEFVQTMFEISVPETTPVN 1351
Query: 118 LAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ + A D D G N+ + +S+ F +D +G + +K LDYE+ Y
Sbjct: 1352 TKLTQFKAIDMDIGINSEISFSIGAGNRRDTFHIDPTSGTLYLHKLLDYEELNSY 1406
Score = 43.1 bits (100), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYY--- 138
SS+A++ I V D+ND P F+ Y + E G V + A+D D G NA +YY
Sbjct: 469 SSSASLIILVNDVNDHEPVFEKSEYSVVLSELSPPGTYVAGITASDEDTGVNAQIYYAFV 528
Query: 139 SVPEDIPFVVDANTGDIRTNKALDYEKQ 166
S ++ F ++A++G I T +D E Q
Sbjct: 529 SGNDNNWFELNADSGLITTKTTIDREIQ 556
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 72/169 (42%), Gaps = 25/169 (14%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------EHQGP 75
+ E+G ++ ++ATD+D+G G V Y + ++ D + T E Q
Sbjct: 3357 ESSEVGTSVGTIQATDEDAGDDGKVYYLFVGSSNDKGFSIGSETGTILVSRRLDRETQNR 3416
Query: 76 I------QDEGGL----SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVH 124
+ ++ GG+ + A V I + D ND PEF YE VPE + G + V
Sbjct: 3417 VVLTVVAKNAGGIRGNDTDEAQVVISIQDGNDP-PEFLQQEYETRVPEDVRPGKIITTVK 3475
Query: 125 ATDAD-EGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D N YS+ + F +D TG I T LD EK Y
Sbjct: 3476 AIDKDVRPLNNQFSYSIINGNSEKAFKIDPQTGAIETAAELDREKIPAY 3524
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 41/95 (43%), Gaps = 3/95 (3%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVV 136
D L + + I VTD ND P + Y ++ E + L V + ATD D QN +
Sbjct: 2691 DNSALRTVLQITINVTDTNDNPPVIEKQIYSANIYEEEYPPLKVCTIKATDLDSEQNGEI 2750
Query: 137 YYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
Y + D F +D GDI T LD E Y
Sbjct: 2751 SYRLINDSDGTFSIDEKNGDIFTEVKLDRESIASY 2785
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 47/107 (43%), Gaps = 12/107 (11%)
Query: 76 IQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+ +GG LSST N+ V D ND +P F + + EG A+ V A D D G
Sbjct: 1411 VASDGGNPRLSSTTLFNVTVEDSNDNSPVFPNTALVRQILEGIPVNKAIVTVTAEDPDSG 1470
Query: 132 QNAVVYYSVPEDIP--------FVVDANTGDIRTNKALDYEKQQLYL 170
+N V YS+ P F ++ TG I T +D E +L
Sbjct: 1471 KNGEVMYSISSQEPETPGHERHFGINPKTGVIYTLLPIDREAVDTFL 1517
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 56/131 (42%), Gaps = 17/131 (12%)
Query: 29 LGVTLMQVKATDKDSG-----KFGLV---EYRLLDNNTDAASYFNL----DPAT--EHQG 74
+G+ + A D DSG KF L + R N Y N DP T +
Sbjct: 927 VGLEVYHSIAKDLDSGPNSRFKFNLTKNAQERFRINEATGVIYLNRKINDDPGTLIPIEV 986
Query: 75 PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEG 131
+ D G L S TV I + D+ND P F YE S+ E + R+ A+DAD G
Sbjct: 987 TVTDFGKPPLMSKQTVVISIKDVNDHTPVFDHTSYETSLLESTRVNKRFFRLVASDADLG 1046
Query: 132 QNAVVYYSVPE 142
N +V Y + E
Sbjct: 1047 LNGLVSYEISE 1057
>gi|88900477|ref|NP_001034722.1| cadherin-10 precursor [Danio rerio]
gi|83339286|gb|ABC12758.1| cadherin 10 type II [Danio rerio]
Length = 785
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 87/185 (47%), Gaps = 31/185 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + ++G +++V ATD D +G +L+ + YF+++P T
Sbjct: 162 YAASVPEMSDVGTFVIEVNATDADDATYG-NSAKLVYSILQGQPYFSVEPETGIVRIALP 220
Query: 71 --------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
++Q IQ + GGLS T VN+ +TD+ND P F Y S E +
Sbjct: 221 NMDREVRKDYQVVIQAKDMAGQMGGLSGTTMVNVTLTDVNDSPPRFAYSSYHLSTYESAE 280
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV-----PEDIPFVVD--ANTGDIRTNKALDYEKQQL 168
G VGR+ A D DEG+NA + Y + E + + D + G I K LDYE +++
Sbjct: 281 IGSTVGRIKANDGDEGENAEMKYRMSDGDGKEYLDIITDEISQEGVIVIKKKLDYETKRV 340
Query: 169 YLERV 173
Y +V
Sbjct: 341 YTVKV 345
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
+++ DIND P+F Y SVPE D G V V+ATDAD+ G +A + YS+ + P
Sbjct: 145 VKIHDINDNEPKFTRAVYAASVPEMSDVGTFVIEVNATDADDATYGNSAKLVYSILQGQP 204
Query: 146 -FVVDANTGDIR 156
F V+ TG +R
Sbjct: 205 YFSVEPETGIVR 216
>gi|114050897|ref|NP_001004177.2| cadherin EGF LAG seven-pass G-type receptor 2 isoform 2 precursor
[Mus musculus]
Length = 2917
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 84/181 (46%), Gaps = 26/181 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS-YFNLDPAT---EHQG 74
Y R+ E+G ++ V+ATD D+ + YRLL+ + S F +DP + +G
Sbjct: 294 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGAGGSPSDAFEIDPRSGVIRTRG 353
Query: 75 PI------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D G SSTA V + V D ND P+F Y V E
Sbjct: 354 PVDREEVESYKLTVEASDQGRDPGPRSSTAIVFLSVEDDNDNAPQFSEKRYVVQVREDVT 413
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLER 172
G V RV A+D D+G NA+V+YS+ F +DA TG + LDYE + Y R
Sbjct: 414 PGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLR 473
Query: 173 V 173
+
Sbjct: 474 I 474
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-------------DAASYFN 65
Y R+ G +++V A+D+D G LV Y ++ N D S +
Sbjct: 404 YVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 463
Query: 66 LDPATEHQGPIQDEGG----LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
+ E+ I+ + G LS+ + V ++V DIND P F S P++ +V E G
Sbjct: 464 YETTKEYTLRIRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 523
Query: 120 VGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V A DAD G NA + YS V D PF ++ TG I LD E+ Y
Sbjct: 524 VLHVQAIDADAGDNARLEYSLAGVGHDFPFTINNGTGWISVAAELDREEVDFY 576
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------------AASYFNLDPATEHQ-- 73
+G +++ V A D+D+ ++ Y++ NT + LD E Q
Sbjct: 625 VGTSVVTVSAVDRDA--HSVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYV 682
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G TA + + VTD N P FQS Y +V E + G V + ATD D G
Sbjct: 683 LAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 742
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + IP F +DA+TG + T LDYE Q Y
Sbjct: 743 ENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSY 781
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 82/181 (45%), Gaps = 33/181 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPATE---- 71
Y A + G ++ ++A D D G+ G +EY L D+ ++ +F+LDP T
Sbjct: 186 YQATVPENQPAGTSVASLRAIDPDEGEAGRLEYTMDALFDSRSN--HFFSLDPITGVVTT 243
Query: 72 -------------HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ QD G S+ AT+ I VTD ND +P F+ Y+ S+ E +
Sbjct: 244 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 303
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV-------PEDIPFVVDANTGDIRTNKALDYEKQQL 168
G V V ATD D NA + Y + P D F +D +G IRT +D E+ +
Sbjct: 304 VGYEVLTVRATDGDAPPNANILYRLLEGAGGSPSDA-FEIDPRSGVIRTRGPVDREEVES 362
Query: 169 Y 169
Y
Sbjct: 363 Y 363
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLDPATEHQGPIQD- 78
+++Q+ ATD+DSG G V Y + + LD Q ++
Sbjct: 833 SVLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAY 892
Query: 79 --EGGLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
+ G+ T V + V D+ND P F+ ++ V E GLAV RV ATD DEG
Sbjct: 893 AVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGT 952
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 953 NAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYEDRPEYV 993
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSSTA 86
G T++ + ATD+D+G+ + Y + D+ F +D A Q + E +S T
Sbjct: 728 GTTVVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTL 783
Query: 87 TVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
+ R V D+ND P+F Y+ SV E +V ++ ATD D
Sbjct: 784 AITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRD 843
Query: 130 EGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N V+Y+ D F+V++ +G +RT + LD E Y+ R + + K
Sbjct: 844 SGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYAVDK 896
Score = 42.7 bits (99), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 32/163 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G+ + +V ATD D G + Y++++ N F LD + + D
Sbjct: 936 IGLAVARVTATDPDEGTNAQIMYQIVEGNI--PEVFQLDIFSGELTALVDLDYEDRPEYV 993
Query: 79 ------EGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRV 123
L S ATV++R+ D ND P + F S P G A+GRV
Sbjct: 994 LVIQATSAPLVSRATVHVRLLDRNDNPPVLGNFEILFNNYVTNRSSSFPGG----AIGRV 1049
Query: 124 HATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
A D D + + ++ V ++A+TG++R ++ALD +
Sbjct: 1050 PAHDPDISDSLTYSFERGNELSLVLLNASTGELRLSRALDNNR 1092
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 100 PEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV------PEDIPFVVDANT 152
P+FQ Y+ +VPE Q G +V + A D DEG+ + Y++ + F +D T
Sbjct: 179 PQFQPPSYQATVPENQPAGTSVASLRAIDPDEGEAGRLEYTMDALFDSRSNHFFSLDPIT 238
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G + T + LD E + ++ RV
Sbjct: 239 GVVTTAEELDRETKSTHVFRV 259
Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 32/136 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASY-------------FN 65
LG ++ V+A D D+G +EY L ++N T S F
Sbjct: 520 LGYLVLHVQAIDADAGDNARLEYSLAGVGHDFPFTINNGTGWISVAAELDREEVDFYSFG 579
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
++ A +H P L+++A+V++ + D+ND NP F Y + E G +V V
Sbjct: 580 VE-ARDHGTP-----ALTASASVSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVS 633
Query: 125 ATDADEGQNAVVYYSV 140
A D D ++V+ Y +
Sbjct: 634 AVDRDA--HSVITYQI 647
>gi|410909490|ref|XP_003968223.1| PREDICTED: cadherin-12-like [Takifugu rubripes]
Length = 801
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 86/188 (45%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + +G + QV ATD D +G V Y +L YF++DP T
Sbjct: 170 YRASVPEMSPVGTYVTQVTATDADDPTYGNSARVVYSILH----GQPYFSVDPKTGVIKT 225
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGL+ T TVNI ++D+ND P F + VPE
Sbjct: 226 ALPNMDREVKEQYQVLIQAKDMGGQLGGLAGTTTVNITLSDVNDNPPRFSKSFFHLRVPE 285
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYS-VPEDIPFVVDANT------GDIRTNKALDYEK 165
G AVGR+ A D D G+NA V Y+ VP D + D T G I + LDYE
Sbjct: 286 SSAVGSAVGRIKAHDLDIGRNAEVEYTIVPGDGGNMFDITTNEHTQEGIIILKRGLDYES 345
Query: 166 QQLYLERV 173
++ Y +V
Sbjct: 346 KKAYTFKV 353
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY SVPE G V +V ATDAD+ G +A V YS+ P
Sbjct: 153 IKVQDINDNEPKFLEGPYRASVPEMSPVGTYVTQVTATDADDPTYGNSARVVYSILHGQP 212
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG I+T +D E ++ Y
Sbjct: 213 YFSVDPKTGVIKTALPNMDREVKEQY 238
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 68/179 (37%), Gaps = 33/179 (18%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY-------------------------- 51
F+ + +G + ++KA D D G+ VEY
Sbjct: 278 FFHLRVPESSAVGSAVGRIKAHDLDIGRNAEVEYTIVPGDGGNMFDITTNEHTQEGIIIL 337
Query: 52 -RLLDNNTDAASYFNLDPATEHQGP-IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF 109
R LD + A F +D H P Q G TATV I V D+ D+ P F Y
Sbjct: 338 KRGLDYESKKAYTFKVDATNAHLDPRFQSFGAFKDTATVKINVLDV-DEPPVFNKPSYVM 396
Query: 110 SVPEGQD-GLAVGRVHATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYE 164
V E G +G V A D D G + V Y + D F +D G I TN+ LD E
Sbjct: 397 DVYEDTPVGTIIGAVTAQDLDAGSSPVRYSIDWKSDLDNYFDIDPVEGTISTNELLDRE 455
>gi|327281345|ref|XP_003225409.1| PREDICTED: neural-cadherin-like [Anolis carolinensis]
Length = 2607
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 81/185 (43%), Gaps = 31/185 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y A + ++G + QV ATD D G+ G + Y LL + ++ ++F+LD T
Sbjct: 791 SSIYEASVTEGADVGTMVFQVSATDLDLGQNGEITYSLLPDRSEDYTFFHLDSKTGSIYT 850
Query: 71 ----------------------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYE 108
E P + S TA V + ++D+ND P F YE
Sbjct: 851 ASVFDREKKASYLLEVKSTDGSESSRPGKHGQPNSDTAYVRVFISDVNDNKPSFTKNVYE 910
Query: 109 FSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
+V E QD G V V A D DEG NA + Y + F V+ G I + LDYE
Sbjct: 911 VNVDEDQDVGSTVITVSANDEDEGTNAKLRYQITAGNTGGVFDVEPEMGAIFIARPLDYE 970
Query: 165 KQQLY 169
+ QLY
Sbjct: 971 ETQLY 975
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 55/98 (56%), Gaps = 6/98 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+S ATV I VTD+ND P F S YE SV EG D G V +V ATD D GQN + YS+
Sbjct: 769 LASFATVYINVTDVNDNVPFFTSSIYEASVTEGADVGTMVFQVSATDLDLGQNGEITYSL 828
Query: 141 ----PEDIPFV-VDANTGDIRTNKALDYEKQQLYLERV 173
ED F +D+ TG I T D EK+ YL V
Sbjct: 829 LPDRSEDYTFFHLDSKTGSIYTASVFDREKKASYLLEV 866
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 76/163 (46%), Gaps = 23/163 (14%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------- 70
A + +G +++V+ATD D G G V+Y L+ + A FN+DP T
Sbjct: 478 ASVLENQPVGTFVLRVEATDADEGTNGEVKYGLMHRD-GALPMFNIDPDTGVLTTLQIFD 536
Query: 71 ---EHQGPI------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAV 120
+ + PI Q L + + + D+ND NP F++ YE+ + E D G +
Sbjct: 537 REKQREHPITVTATDQAAEPLIGICQITVVILDVNDNNPRFENSHYEYFLREDTDVGTSF 596
Query: 121 GRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKAL 161
RV A D D G NA + YS+ + P F ++ TG + + L
Sbjct: 597 LRVAAHDDDYGSNASITYSIAKGKPKYFEINPTTGWVYATQPL 639
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY-------RLLDNNTDAASYFNLDPA 69
L A++ L +L+ +G FG+ E R +D +D Y + A
Sbjct: 178 LMLSALSHQNESLSYSLVT-----NPNGLFGINEVTGNLYLSRNMDYESDQHQYLLVVQA 232
Query: 70 TEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPY-EFSVPEG-QDGLAVGRVHATD 127
TE + G L+ST V + +TD+ND PEFQ Y + +VPE A+ +V A+D
Sbjct: 233 TE------NPGQLTSTVEVWVVITDVNDCAPEFQQSIYTKDNVPETVMVTTALLQVSASD 286
Query: 128 ADEGQNA-VVYYSVPEDIPFVVDANTGDIRTNKALDYEK-QQLYLERVFLISK 178
D +NA ++YYS+ D ++ G I LDYE+ LY V + K
Sbjct: 287 CDSEENAEILYYSLSPDFSI---SDYGAIFPATQLDYERPNHLYEFIVMAVDK 336
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 73/173 (42%), Gaps = 24/173 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGP 75
Y + ++G T++ V A D+D G + Y++ NT F+++P A P
Sbjct: 909 YEVNVDEDQDVGSTVITVSANDEDEGTNAKLRYQITAGNTGGV--FDVEPEMGAIFIARP 966
Query: 76 IQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVG- 121
+ E G A V I + + ND+ P F Y SV E DGL V
Sbjct: 967 LDYEETQLYELHLLASDGKWEDYAIVIINIVNKNDEAPVFALNEYYGSVIEELDGLPVFV 1026
Query: 122 -RVHATDADE----GQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V A D D G + + D F +D NTG I + K LD E++ L+
Sbjct: 1027 LQVVANDPDSALDGGDIRYSLHGLGADDVFAIDENTGSIYSQKILDREERALW 1079
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 67/139 (48%), Gaps = 12/139 (8%)
Query: 48 LVEYRL-LDNNTDAASYFN--LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEF-- 102
L+ + L LD + D SY + +DP P+ + G + + VTD+ND PE+
Sbjct: 3 LLRFHLHLDMHLDVVSYLHPWIDPPLT---PVLESGTDWYLVHLELTVTDVNDNVPEWAM 59
Query: 103 QSLPYEFSV-PEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNK 159
Q PY +V P G V ++ A D DE +N V Y + D F V+ +TG I+T
Sbjct: 60 QPFPYLATVSPNASAGSKVYKLLAEDQDEEENGAVEYFLVGGGDDRFEVERDTGWIKTT- 118
Query: 160 ALDYEKQQLYLERVFLISK 178
L EK++ Y+ V K
Sbjct: 119 GLSLEKEREYVLTVMAADK 137
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 74/176 (42%), Gaps = 40/176 (22%)
Query: 33 LMQVKATDKDSGKFGL---VEYRLLDN--NTDAASYFNLDPATEHQGPIQDEGGLSSTAT 87
+M++ A D D GL + YR+++N N F ++P+T G I GG+ T
Sbjct: 1134 IMEMTAVDLDDTNVGLNAILTYRIVENVKNDFDMDVFKINPST---GNIYVTGGMLDRET 1190
Query: 88 VN---------------------IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHA 125
+ I V D+ND P F + +PE V + A
Sbjct: 1191 ADKYFLTIEAKDGGGLTGTGTATIWVADVNDHIPSFTQEIWHVVIPEASTVNSEVLEISA 1250
Query: 126 TDADEGQNAVVYYSVPEDIP---FVVDANTGD----IRTNKALDYEKQQLYLERVF 174
D D G+NA++ +S+ P F ++ + D +R K LDYE+ Q ER F
Sbjct: 1251 VDGDSGENALLTFSIIGGDPDERFYIENHKEDQRASLRLKKTLDYEEIQ---ERWF 1303
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 35/174 (20%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLD-------------PATEHQG 74
+G T++ V ATD+DS G +EY + LD +D F +D AT+ G
Sbjct: 1350 VGTTIITVTATDEDSNLNGAIEYSIQLD--SDPTGQFAVDQDGHVTVSKSLDREATQAYG 1407
Query: 75 PI---QDEGGLSSTATVNIRV--TDINDKNPEFQS--LPYEFSVPEGQDGLAVGR----V 123
I D+G + T +V I + DIND P F++ +P + G + + +
Sbjct: 1408 LIVQASDQGVPAQTGSVTILIDLLDINDNGPRFEASYMPVVWENTPGPQLVDMNTTSNLI 1467
Query: 124 HATDADEGQNAVVY-YSVPEDIPFVVD-------ANTGDIRTNKALDYEKQQLY 169
A D D +N + +S+P D ++D NT I ++ D EKQ+++
Sbjct: 1468 WAFDPDSDENGPPFIFSLPPDYQNLLDFSLTDNGNNTATITALRSFDREKQKMF 1521
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 80/191 (41%), Gaps = 44/191 (23%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSG-KFGLVEYRLLDNNTDAASYFNLDPATEHQGPI 76
+YG++ + L V ++QV A D DS G + Y L + A F +D E+ G I
Sbjct: 1011 YYGSVIEELDGLPVFVLQVVANDPDSALDGGDIRYSL--HGLGADDVFAID---ENTGSI 1065
Query: 77 --------------------QDEGG--LSSTATVNIRVTDINDKNPEFQSLP-------Y 107
DEGG L+ A V I + DIND P F +P +
Sbjct: 1066 YSQKILDREERALWRFVVLATDEGGEGLTGFADVIINIWDINDNAPVFPCMPSNCNGTVF 1125
Query: 108 EFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP-------FVVDANTGDIR-TNK 159
E S PE + + V D + G NA++ Y + E++ F ++ +TG+I T
Sbjct: 1126 ENS-PEDTFIMEMTAVDLDDTNVGLNAILTYRIVENVKNDFDMDVFKINPSTGNIYVTGG 1184
Query: 160 ALDYEKQQLYL 170
LD E Y
Sbjct: 1185 MLDRETADKYF 1195
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 24/143 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE--HQGPIQ---------DEGG 81
L+QV A+D DS + + Y L + + Y + PAT+ ++ P D+G
Sbjct: 279 LLQVSASDCDSEENAEILYYSLSPDFSISDYGAIFPATQLDYERPNHLYEFIVMAVDKGD 338
Query: 82 --LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE--GQDGLAVGRVHATDAD-EGQNAVV 136
+ TATV IR+++IND+ P+F Y V E G + L + VHA D D +G V
Sbjct: 339 PPRTGTATVRIRISNINDEVPKFSQPVYRSFVSEDAGPNTL-IATVHAIDPDGDG----V 393
Query: 137 YYSVP---EDIPFVVDANTGDIR 156
YS+ + F++D G IR
Sbjct: 394 SYSITGGNQMGNFIIDPQKGLIR 416
Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 70/183 (38%), Gaps = 30/183 (16%)
Query: 6 IPSALEMTSDSLFYGAMARDKHELGVTLMQVKATD----------KDSGKFGLVEYRLLD 55
IP A + S+ L A+ D E + + D K+ + L + LD
Sbjct: 1235 IPEASTVNSEVLEISAVDGDSGENALLTFSIIGGDPDERFYIENHKEDQRASLRLKKTLD 1294
Query: 56 NNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSL-----PYEFS 110
+FNL E + SS A I V D ND P F S P+ +
Sbjct: 1295 YEEIQERWFNLTIKVE-------DLDFSSIAFCLIEVEDCNDHTPVFNSQLVQLSPFYEN 1347
Query: 111 VPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI----PFVVDANTGDIRTNKALDYEKQ 166
+P G + V ATD D N + YS+ D F VD + G + +K+LD E
Sbjct: 1348 IPVGT---TIITVTATDEDSNLNGAIEYSIQLDSDPTGQFAVDQD-GHVTVSKSLDREAT 1403
Query: 167 QLY 169
Q Y
Sbjct: 1404 QAY 1406
Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPY---EFSVPEGQD-GLAVGRVHATDADEGQNAVVY 137
LSSTA V + V D+N+ P FQ + SV E Q G V RV ATDADEG N V
Sbjct: 448 LSSTALVVVHVDDVNNNKPIFQKCQHYREHASVLENQPVGTFVLRVEATDADEGTNGEVK 507
Query: 138 YSVPED---IP-FVVDANTGDIRTNKALDYEKQQ 167
Y + +P F +D +TG + T + D EKQ+
Sbjct: 508 YGLMHRDGALPMFNIDPDTGVLTTLQIFDREKQR 541
>gi|402894358|ref|XP_003910330.1| PREDICTED: protocadherin-16 [Papio anubis]
Length = 3345
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 80/162 (49%), Gaps = 28/162 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------------EHQ 73
G +++V A D D G G V Y L +F++DP +
Sbjct: 536 GSFVVRVTARDPDQGTNGQVTYTLAPGAH--THWFSIDPTSGIITTAASLDYELEPHPQL 593
Query: 74 GPIQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ +GGL +S+ATVN+ + D+ND P+FQ Y S+PEG Q G +V ATDAD
Sbjct: 594 TVVATDGGLPPLASSATVNVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDAD 653
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEK 165
G ++ YS+ + PF +DA++GD+ T + LD ++
Sbjct: 654 SGLFGLLSYSLGAGLGSSGSPPFRIDAHSGDVCTTRTLDRDQ 695
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 27/177 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + R+ G +L+ ++ATD D G G V Y + + + F+LDP T
Sbjct: 1701 YSVLLRENSAPGTSLLTLRATDPDLGANGQVTYGGVSSGS-----FSLDPDTGVLTTLRA 1755
Query: 71 ---EHQGPI------QDEGGLS--STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
E Q I QD G + AT+ + V D ND P F S VPEGQD
Sbjct: 1756 LDREEQEEINLTVYAQDRGSPPQLTHATIRVAVEDENDHAPTFGSTHLSLEVPEGQDPQT 1815
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ + A+D D G N + Y + + P FV+D +G+ T + LD E + + R+
Sbjct: 1816 LTMLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQLRI 1872
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 28/167 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQ 73
+G L+ V+A+D D G GLV + + ++ D + F LD ++ HQ
Sbjct: 2664 VGAELLHVEASDADPGPHGLVRFTV--SSGDPSGLFELDESSGTLRLAHALDCETQARHQ 2721
Query: 74 GPIQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
+Q G + A V I V D+ND P F S+ E Q G V +HA D D
Sbjct: 2722 LVVQAADPTGAHFALAPVTIEVQDVNDHGPAFPLNLLSTSLAENQPPGTLVTTLHAIDGD 2781
Query: 130 EGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYEKQQLY 169
G + YS+ E P F ++++TG++R A DYE + +
Sbjct: 2782 AGAFGKLRYSLLEAGPGPEGREAFALNSSTGELRARVAFDYEHTESF 2828
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 20/158 (12%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL---------------DPATEHQGPI 76
TL ++A+D D G G ++YR+LD + A +L +PA + +
Sbjct: 1815 TLTMLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQLRIEA 1874
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQN 133
+D G LS+T + + V D ND P F Y VPE G + ++ A D D G N
Sbjct: 1875 RDGGQPALSATLLLTVTVLDANDHAPAFPVPAYSVEVPEDVPAGTLLLQLQAHDPDAGAN 1934
Query: 134 AVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
V Y + F+++ ++G++RT ALD E+ Y
Sbjct: 1935 GRVTYYLGAGTAGAFLLEPSSGELRTAAALDREQCPSY 1972
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 21/147 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNT--DAASYFNLDPAT-----------EHQGPI 76
G + + A D D+G FG + Y LL+ + F L+ +T EH
Sbjct: 2769 GTLVTTLHAIDGDAGAFGKLRYSLLEAGPGPEGREAFALNSSTGELRARVAFDYEHTESF 2828
Query: 77 Q------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ D G LS++ TV++ VT ++ +P F + + F VPEG + G ++G V ATD D
Sbjct: 2829 RLLVGAADAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQVPEGARRGHSLGHVQATDED 2888
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDI 155
G + +V YS+ P F ++ TG +
Sbjct: 2889 GGADGLVLYSLATSSPYFGINQTTGAL 2915
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 64/146 (43%), Gaps = 26/146 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY--------------RLLDNNTDAASY 63
FY A + + G +QV ATD DSG FGL+ Y R+ ++ D +
Sbjct: 629 FYNASLPEGTQPGTCFLQVTATDADSGLFGLLSYSLGAGLGSSGSPPFRIDAHSGDVCTT 688
Query: 64 FNLDPATEHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEG 114
LD QGP D GGL S V + ++D ND P+F Y S+ +
Sbjct: 689 RTLD---RDQGPSSFDFTVTAVDGGGLKSMVYVKVFLSDENDNPPQFYPREYAASISAQS 745
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV 140
G AV RV A D D+G + + Y +
Sbjct: 746 PPGTAVLRVRAHDPDQGSHGRLSYHI 771
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 67/158 (42%), Gaps = 30/158 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPI--- 76
G L+Q++A D D+G G V Y L A F L+P++ Q P
Sbjct: 1918 GTLLLQLQAHDPDAGANGRVTYYL---GAGTAGAFLLEPSSGELRTAAALDREQCPSYTF 1974
Query: 77 -------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-----GQDGLAVGRVH 124
G LS+T +V I V D+ND P F + P +P LA+ +
Sbjct: 1975 AVSAVDGAAAGPLSTTVSVTIIVRDVNDHAPTFPTSPLRLRLPRPGPSFSTPTLALATLR 2034
Query: 125 ATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKA 160
A D D G NA + Y + P VD+ TG+IR ++
Sbjct: 2035 AEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARS 2072
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 73/167 (43%), Gaps = 32/167 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQ----- 73
G ++QV+A D G V Y L A+S F L+P + E Q
Sbjct: 1063 GTQVLQVQAQAPDGGP---VTYHLAAEG--ASSPFGLEPQSGWLWVRAALDREAQELYIL 1117
Query: 74 ------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
G + G + TATV + + + N+ +P P +V E Q G +VGRV AT
Sbjct: 1118 KVMAVSGSKAELGQQTGTATVRVSILNQNEHSPRLSEDPTFLAVAENQPPGTSVGRVFAT 1177
Query: 127 DADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
D D G N + YS+ + F + TG++ T + LD E+Q Y
Sbjct: 1178 DRDSGPNGRLTYSLQQLSEDSKAFRIHPQTGEVTTLQTLDREQQSTY 1224
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 71/160 (44%), Gaps = 27/160 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYFN-LDP----------- 68
G + V A D D G+ V YRL L ++T A S LD
Sbjct: 1608 GPAALHVVARDPDLGEAARVSYRLASGGDGHFRLHSSTGALSVVQPLDREQRAEHILTVV 1667
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
A++H P + S+T + + V D+ND+ P FQ Y + E G ++ + ATD
Sbjct: 1668 ASDHGSPPR-----SATQVLTVSVADVNDEAPTFQQQEYSVLLRENSAPGTSLLTLRATD 1722
Query: 128 ADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQ 167
D G N V Y F +D +TG + T +ALD E+Q+
Sbjct: 1723 PDLGANGQVTYGGVSSGSFSLDPDTGVLTTLRALDREEQE 1762
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 76/176 (43%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------P 68
Y A + G +++V+A D D G G + Y +L N+ F LD P
Sbjct: 737 YAASISAQSPPGTAVLRVRAHDPDQGSHGRLSYHILAGNS--PPLFALDEQSGLLTVAWP 794
Query: 69 ATEHQGPI-------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGL 118
+ QD GGL + +A VNI + P F+ L Y FSVPE G
Sbjct: 795 LARRANSVVQLEIGAQDGGGLQAEPSARVNISIVPGTPTPPIFEQLQYVFSVPEDVAPGT 854
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
+VG V A + G+ A V S+ P F +DA +G ++T + LD E LE
Sbjct: 855 SVGIVQAHNP-PGRLAPVTLSLSGGDPRGLFSLDAISGLLQTLRPLDRELLGPVLE 909
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE---- 142
+++ + DIND P F Y V E G V +V A+DAD G N V Y +
Sbjct: 288 LDVTLLDINDHAPAFNQSRYHAVVSESLAPGSPVLQVFASDADAGANGAVTYEINRRQSE 347
Query: 143 -DIPFVVDANTGDIRTNKALDYEKQQLY 169
D PF +DA+TG ++ + LD+E+++++
Sbjct: 348 GDGPFSIDAHTGLLQLERPLDFEQRRVH 375
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 72/172 (41%), Gaps = 29/172 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH----------QGPI--- 76
G + ++A D DSG V + LL A F +DP T H GP
Sbjct: 957 GTPIYTLRALDPDSGVNSRVTFTLLAGGGGA---FTVDPTTGHVRLMRPLGPSGGPAHEL 1013
Query: 77 ----QDEGGLSSTATVNIRVT--DINDKN--PEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
+D G T+ +RV D+ + P+F S Y +P G G V +V A
Sbjct: 1014 ELEARDGGSPPRTSHFRLRVVVQDVGTRGLAPQFDSPTYRVDLPSGTIPGTQVLQVQAQA 1073
Query: 128 ADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D G V Y+ E PF ++ +G + ALD E Q+LY+ +V +S
Sbjct: 1074 PDGG--PVTYHLAAEGASSPFGLEPQSGWLWVRAALDREAQELYILKVMAVS 1123
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 35/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G ++ +V ATD+DSG G + Y L + D+ + F + P T E Q
Sbjct: 1168 GTSVGRVFATDRDSGPNGRLTYSLQQLSEDSKA-FRIHPQTGEVTTLQTLDREQQSTYQL 1226
Query: 76 ---IQDEGGLS--STATVNIRVTDINDKNPEF--------QSLPYEF--SVPEGQDGLAV 120
+QD G S +T TV++ V D+ND +P F LP + VP G V
Sbjct: 1227 LVQVQDGGSPSHSTTGTVHVAVLDLNDNSPTFLQASGAAAGGLPIQVPDRVPPGT---LV 1283
Query: 121 GRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ A D DEG+N + Y++ P F ++ ++G++ T L ++ Y+
Sbjct: 1284 TTLQAKDPDEGENGTILYTLTGPGSELFSLNPHSGELLTAAPLIRAERPHYV 1335
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 72/178 (40%), Gaps = 40/178 (22%)
Query: 30 GVTLMQVKATDKDSGK-FGLVEYRLLDNNTDAASYFNLDP----ATEHQGPIQDEGGL-- 82
G TL+ ++ATD D + VEY ++ N F L+P A E GP G
Sbjct: 2545 GSTLLTLEATDADGSRTHAAVEYSIISGNW--GRVFQLEPRLAEAGESAGPGPQALGCLV 2602
Query: 83 ---------------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
SS V + V D+ND P F Y +VPE
Sbjct: 2603 LLEPLDFESLTQYNLTVAAADRGQPPQSSVVPVTVTVLDVNDNPPVFTRASYRVAVPEDT 2662
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
G + V A+DAD G + +V ++V P F +D ++G +R ALD E Q +
Sbjct: 2663 PVGAELLHVEASDADPGPHGLVRFTVSSGDPSGLFELDESSGTLRLAHALDCETQARH 2720
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 70/180 (38%), Gaps = 39/180 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + L L+QV+A D D G G + Y L + A F++DP
Sbjct: 2223 YVAFLPESRPLEGPLLQVEADDLDQGSGGQISYSLAASQP-ARGLFHVDPATGTITTTAI 2281
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
AT+ P L +AT+ + V D ND P P+E V E
Sbjct: 2282 LDREIWAETRLVLMATDRGSP-----ALVGSATLTVMVIDTNDNRPTIPQ-PWELRVSED 2335
Query: 114 GQDGLAVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + +V D D G V++Y S P+D PF V G + LD+E+ Y
Sbjct: 2336 ALLGSEIAQVTGNDVDSG--PVLWYVLSPSGPQD-PFSVGRYGGRVSLTGPLDFEQCDRY 2392
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------- 68
Y M + G ++ V ATD+DSG G + Y L A F++DP
Sbjct: 2427 LYQVMLLEHTPPGSAILSVSATDRDSGANGHISYHL----ASPADGFSVDPNNGTLFTIV 2482
Query: 69 ---ATEHQGP--------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG- 114
A H G +D G G ++ ATV++++ D ND P F Y +V E
Sbjct: 2483 GTVALGHDGSGAVDVVLEARDHGTPGRAARATVHVQLQDQNDHAPSFTLPHYRVAVTEDL 2542
Query: 115 QDGLAVGRVHATDADEGQ-NAVVYYSV 140
G + + ATDAD + +A V YS+
Sbjct: 2543 PPGSTLLTLEATDADGSRTHAAVEYSI 2569
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 15/93 (16%)
Query: 82 LSSTATVNIRVTDINDKNPEF-------QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
L + A + VTD+ND P F + LP E ++P G V RV A D D+G N
Sbjct: 499 LRAEAAFVLHVTDVNDNAPAFDRQFYQPEPLP-EVALP----GSFVVRVTARDPDQGTNG 553
Query: 135 VVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
V Y++ F +D +G I T +LDYE
Sbjct: 554 QVTYTLAPGAHTHWFSIDPTSGIITTAASLDYE 586
Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD-EGQNAVVYYSVPEDIP 145
V +RV D N+ P F P ++PE + A+ A+DAD G N+ V Y + P
Sbjct: 1469 VQVRVQDENEHAPAFARDPLALALPENPEPSAALYTFRASDADGPGPNSDVRYRLLRQEP 1528
Query: 146 FV----VDANTGDIRTNKALDYEKQQLYL 170
V +DA TG + + LD E L
Sbjct: 1529 PVPALRLDARTGALSAPRGLDRETTPALL 1557
>gi|114050895|ref|NP_059088.2| cadherin EGF LAG seven-pass G-type receptor 2 isoform 1 precursor
[Mus musculus]
gi|148670020|gb|EDL01967.1| cadherin EGF LAG seven-pass G-type receptor 2 [Mus musculus]
gi|225356528|gb|AAI56537.1| Cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog,
Drosophila) [synthetic construct]
Length = 2919
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 84/181 (46%), Gaps = 26/181 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS-YFNLDPAT---EHQG 74
Y R+ E+G ++ V+ATD D+ + YRLL+ + S F +DP + +G
Sbjct: 294 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGAGGSPSDAFEIDPRSGVIRTRG 353
Query: 75 PI------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D G SSTA V + V D ND P+F Y V E
Sbjct: 354 PVDREEVESYKLTVEASDQGRDPGPRSSTAIVFLSVEDDNDNAPQFSEKRYVVQVREDVT 413
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLER 172
G V RV A+D D+G NA+V+YS+ F +DA TG + LDYE + Y R
Sbjct: 414 PGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLR 473
Query: 173 V 173
+
Sbjct: 474 I 474
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-------------DAASYFN 65
Y R+ G +++V A+D+D G LV Y ++ N D S +
Sbjct: 404 YVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 463
Query: 66 LDPATEHQGPIQDEGG----LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
+ E+ I+ + G LS+ + V ++V DIND P F S P++ +V E G
Sbjct: 464 YETTKEYTLRIRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 523
Query: 120 VGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V A DAD G NA + YS V D PF ++ TG I LD E+ Y
Sbjct: 524 VLHVQAIDADAGDNARLEYSLAGVGHDFPFTINNGTGWISVAAELDREEVDFY 576
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------------AASYFNLDPATEHQ-- 73
+G +++ V A D+D+ ++ Y++ NT + LD E Q
Sbjct: 625 VGTSVVTVSAVDRDA--HSVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYV 682
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G TA + + VTD N P FQS Y +V E + G V + ATD D G
Sbjct: 683 LAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 742
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + IP F +DA+TG + T LDYE Q Y
Sbjct: 743 ENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSY 781
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 82/181 (45%), Gaps = 33/181 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPATE---- 71
Y A + G ++ ++A D D G+ G +EY L D+ ++ +F+LDP T
Sbjct: 186 YQATVPENQPAGTSVASLRAIDPDEGEAGRLEYTMDALFDSRSN--HFFSLDPITGVVTT 243
Query: 72 -------------HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ QD G S+ AT+ I VTD ND +P F+ Y+ S+ E +
Sbjct: 244 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 303
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV-------PEDIPFVVDANTGDIRTNKALDYEKQQL 168
G V V ATD D NA + Y + P D F +D +G IRT +D E+ +
Sbjct: 304 VGYEVLTVRATDGDAPPNANILYRLLEGAGGSPSDA-FEIDPRSGVIRTRGPVDREEVES 362
Query: 169 Y 169
Y
Sbjct: 363 Y 363
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLDPATEHQGPIQD- 78
+++Q+ ATD+DSG G V Y + + LD Q ++
Sbjct: 833 SVLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAY 892
Query: 79 --EGGLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
+ G+ T V + V D+ND P F+ ++ V E GLAV RV ATD DEG
Sbjct: 893 AVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGT 952
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 953 NAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYEDRPEYV 993
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSSTA 86
G T++ + ATD+D+G+ + Y + D+ F +D A Q + E +S T
Sbjct: 728 GTTVVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTL 783
Query: 87 TVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
+ R V D+ND P+F Y+ SV E +V ++ ATD D
Sbjct: 784 AITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRD 843
Query: 130 EGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N V+Y+ D F+V++ +G +RT + LD E Y+ R + + K
Sbjct: 844 SGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYAVDK 896
Score = 42.7 bits (99), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 32/163 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G+ + +V ATD D G + Y++++ N F LD + + D
Sbjct: 936 IGLAVARVTATDPDEGTNAQIMYQIVEGNI--PEVFQLDIFSGELTALVDLDYEDRPEYV 993
Query: 79 ------EGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRV 123
L S ATV++R+ D ND P + F S P G A+GRV
Sbjct: 994 LVIQATSAPLVSRATVHVRLLDRNDNPPVLGNFEILFNNYVTNRSSSFPGG----AIGRV 1049
Query: 124 HATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
A D D + + ++ V ++A+TG++R ++ALD +
Sbjct: 1050 PAHDPDISDSLTYSFERGNELSLVLLNASTGELRLSRALDNNR 1092
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 100 PEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV------PEDIPFVVDANT 152
P+FQ Y+ +VPE Q G +V + A D DEG+ + Y++ + F +D T
Sbjct: 179 PQFQPPSYQATVPENQPAGTSVASLRAIDPDEGEAGRLEYTMDALFDSRSNHFFSLDPIT 238
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G + T + LD E + ++ RV
Sbjct: 239 GVVTTAEELDRETKSTHVFRV 259
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 32/136 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASY-------------FN 65
LG ++ V+A D D+G +EY L ++N T S F
Sbjct: 520 LGYLVLHVQAIDADAGDNARLEYSLAGVGHDFPFTINNGTGWISVAAELDREEVDFYSFG 579
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
++ A +H P L+++A+V++ + D+ND NP F Y + E G +V V
Sbjct: 580 VE-ARDHGTP-----ALTASASVSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVS 633
Query: 125 ATDADEGQNAVVYYSV 140
A D D ++V+ Y +
Sbjct: 634 AVDRD--AHSVITYQI 647
>gi|329112510|ref|NP_001192266.1| cadherin EGF LAG seven-pass G-type receptor 3 precursor [Bos
taurus]
Length = 3314
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 57/176 (32%), Positives = 85/176 (48%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQ--GP 75
Y A R+ +++V ATD+D GLV Y ++ N+ +F +D T E Q P
Sbjct: 548 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRG--HFAIDSLTGEIQVVAP 605
Query: 76 I--------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ QD G ++T +I+V DIND P F S P++ SV E G
Sbjct: 606 LDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLENAPLG 665
Query: 118 LAVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+V + A DAD G+N+ + YS V D PFV+++ TG + + LD E + Y
Sbjct: 666 HSVIHIQAVDADHGENSRLEYSLTGVAPDTPFVINSATGWVSVSGPLDRESVEHYF 721
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQG 74
+++Q+ ATD+D+ G V+Y N D F ++P + E
Sbjct: 977 SVLQISATDRDAHANGRVQYTF-QNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTA 1035
Query: 75 PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G L + ++ + V D+ND P F + +E V E G V ++ A D DEG
Sbjct: 1036 YAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDEG 1095
Query: 132 QNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE +Q Y+
Sbjct: 1096 PNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYI 1137
Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 55/185 (29%), Positives = 83/185 (44%), Gaps = 32/185 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL---DNNTDAASYFNLDPAT----- 70
Y R+ E G ++Q++ATD D+ + YR + AA F +DP +
Sbjct: 436 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARAAAADAFEIDPRSGLIST 495
Query: 71 ------EH------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH QG Q+ G S+T V+I V D ND P+F Y V
Sbjct: 496 SGRVDREHMESYELVVEASDQG--QEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVR 553
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E + V RV ATD D+ N +V+Y++ F +D+ TG+I+ LD+E ++
Sbjct: 554 EDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVVAPLDFEAERE 613
Query: 169 YLERV 173
Y R+
Sbjct: 614 YALRI 618
Score = 55.8 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V+I +TD N P FQS Y SV E + G V + A+D D G+NA + Y + +++P
Sbjct: 842 VHINITDANTHRPVFQSAHYSVSVNEDRPVGSTVVVISASDDDVGENARITYLLEDNLPQ 901
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +D ++G I LDYE Q Y
Sbjct: 902 FRIDTDSGAITLQAPLDYEDQVTY 925
Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 47/180 (26%), Positives = 77/180 (42%), Gaps = 29/180 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT------- 70
Y A+ + G +++V A D D+G+ G + Y L N+ + F++DP +
Sbjct: 328 YQALVPENEAAGTAVLRVVAQDPDTGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTEA 387
Query: 71 --------EHQGPI--QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
H + QD G LS+T V + V D ND P F+ Y ++ E ++G
Sbjct: 388 ALDRESMDRHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRENVEEG 447
Query: 118 LAVGRVHATDADEGQNAVVYY--------SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ ++ ATD D NA + Y F +D +G I T+ +D E + Y
Sbjct: 448 YPILQLRATDGDAPPNANLRYRFVGPPAARAAAADAFEIDPRSGLISTSGRVDREHMESY 507
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 22/175 (12%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN------NTDAASYFNLDPA 69
S Y + +G T++ + A+D D G+ + Y L DN +TD+ + L
Sbjct: 858 SAHYSVSVNEDRPVGSTVVVISASDDDVGENARITYLLEDNLPQFRIDTDSGA-ITLQAP 916
Query: 70 TEHQGPI--------QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL- 118
+++ + +D G + T V + V D+ND P+F + Y V E
Sbjct: 917 LDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAPPFT 976
Query: 119 AVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ++ ATD D N V Y+ D F ++ +G +RT + LD E +Y
Sbjct: 977 SVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVY 1031
Score = 42.7 bits (99), Expect = 0.064, Method: Composition-based stats.
Identities = 48/177 (27%), Positives = 72/177 (40%), Gaps = 30/177 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI--------- 76
LG +++ ++A D D G+ +EY L D F ++ AT GP+
Sbjct: 664 LGHSVIHIQAVDADHGENSRLEYSLTGVAPDTP--FVINSATGWVSVSGPLDRESVEHYF 721
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D G LS++A+V + V D+ND PEF Y + E G +V V A D
Sbjct: 722 FGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDATVGTSVVSVTAVDR 781
Query: 129 DEGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
D N+ + Y + G + LDY KQ+ Y + V S A
Sbjct: 782 D--ANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLDY-KQERYFKLVLTASDRA 835
Score = 40.8 bits (94), Expect = 0.25, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 99 NPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDAN 151
+P+F Y+ VPE + G AV RV A D D G+ + YS+ + F +D
Sbjct: 320 HPQFPQYNYQALVPENEAAGTAVLRVVAQDPDTGEAGRLVYSLAALMNSRSLELFSIDPQ 379
Query: 152 TGDIRTNKALDYEKQQLYLERV 173
+G IRT ALD E + RV
Sbjct: 380 SGLIRTEAALDRESMDRHYLRV 401
Score = 37.4 bits (85), Expect = 2.6, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 20/154 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPI- 76
+G + Q+ A D D G + Y++++ N + + +LD + I
Sbjct: 1080 VGSVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYIIV 1139
Query: 77 --QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFS--VPEGQDGLA---VGRVHATDAD 129
L S ATV++R+ D ND +P + F+ V D +GR+ A D D
Sbjct: 1140 VQATSAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPD 1199
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALD 162
+ + ++ VV+ +G++R ++ LD
Sbjct: 1200 VSDHLFYSFERGNELQLLVVNQTSGELRLSRKLD 1233
>gi|156361307|ref|XP_001625459.1| predicted protein [Nematostella vectensis]
gi|156212294|gb|EDO33359.1| predicted protein [Nematostella vectensis]
Length = 814
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A+ + +G TL+ V A D+D+ V Y ++ +T++ YF +D T
Sbjct: 7 LYSAIIPEDFTVGGTLLTVLARDQDAALNARVTYSIVSFSTES-DYFVIDNITGVVRSSK 65
Query: 71 ----EHQG------PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E Q +D G S+ AT+++++TD ND P FQ + YE V E G
Sbjct: 66 EFDYETQRMYSFSVRAEDRGSPIRSAIATIHVQITDTNDNRPIFQPMEYETRVSENTPLG 125
Query: 118 LAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V RV A D D NA + YS+ + F +D +TG+I T K D+EK + Y
Sbjct: 126 TIVARVKAVDKDSTSNADLIYSIQNGNNNGSFTIDNSTGEIMTRKEFDFEKTERY 180
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 75/164 (45%), Gaps = 23/164 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA-------------SYFNLDPATEHQGP 75
+G + QV A+D DS G V + +L N+D + + TE+
Sbjct: 616 IGTPVTQVTASDLDSSLNGKVLFSILGGNSDGKFVIDQNTGVVTTNKSLDYEDVTEYTLV 675
Query: 76 IQ--DEG----GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
IQ D G S +++ V +IND +P F Y S+ E G + RV A+D
Sbjct: 676 IQATDCGDPPLNSSQPGMLHVSVVNINDNSPVFSQKMYSASIDENTTVGHVILRVTASDL 735
Query: 129 DEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D N V +S+ E D FVVD NTG + TNK+LDYE Y
Sbjct: 736 DSSLNGKVLFSILEGNSDGKFVVDQNTGVVTTNKSLDYEDVTEY 779
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 28/180 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGL-VEYRLLDNNTDAASYFNLDPATEHQG 74
+L+Y + +G +++V A D+D G+ E R + + F+++ T
Sbjct: 495 TLYYTLQLSEATSIGTRILRVSANDRDDKDEGVNAEIRYFLKDAIVSKKFSINDTTGQIT 554
Query: 75 PIQ----------------DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
Q +GG L+ +++V I + D+ND P F LP + V +
Sbjct: 555 IKQAVDYEERSSYSFEVFASDGGEARLTGSSSVRITIIDVNDNRPYF--LPTRYYVQLVE 612
Query: 116 D---GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ G V +V A+D D N V +S+ D FV+D NTG + TNK+LDYE Y
Sbjct: 613 NVAIGTPVTQVTASDLDSSLNGKVLFSILGGNSDGKFVIDQNTGVVTTNKSLDYEDVTEY 672
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 77/176 (43%), Gaps = 27/176 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH------ 72
Y + LG + +VKA DKDS + Y + + N + + F +D +T
Sbjct: 114 YETRVSENTPLGTIVARVKAVDKDSTSNADLIYSIQNGNNNGS--FTIDNSTGEIMTRKE 171
Query: 73 -----------QGPIQDEG--GLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QD 116
+ D G LSS A V I V D ND PEF Y +V E
Sbjct: 172 FDFEKTERYNLTISVSDTGVPALSSLNFANVVIIVVDENDNPPEFAQKRYTATVYENFTV 231
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
G V RV A D D G NA++ YS+ D FV+ A++GDI +K LD E + Y
Sbjct: 232 GTVVLRVTAHDKDSGPNAMLKYSIHSGNTDDAFVIIADSGDISLDKPLDKETIENY 287
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 75/169 (44%), Gaps = 24/169 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LDPATEHQGPI-- 76
G ++ + A D+D G G V Y ++ ++ N LD + +Q +
Sbjct: 404 GTQVLTLFAHDRDEGINGQVFYYIVTSSVKGVFTTNSTTGVVSLTAELDRESVYQYNMLV 463
Query: 77 --QDEGGLSSTAT--VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD---A 128
QD G TA+ V + V D ND P F +L Y + E G + RV A D
Sbjct: 464 VAQDGGSPPRTASAHVKVEVLDCNDNPPVFTTLYYTLQLSEATSIGTRILRVSANDRDDK 523
Query: 129 DEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLYLERVF 174
DEG NA + Y + + I F ++ TG I +A+DYE++ Y VF
Sbjct: 524 DEGVNAEIRYFLKDAIVSKKFSINDTTGQITIKQAVDYEERSSYSFEVF 572
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA-TEHQGPIQ 77
Y A + +G +++V A DKDSG +++Y + NTD A D P+
Sbjct: 221 YTATVYENFTVGTVVLRVTAHDKDSGPNAMLKYSIHSGNTDDAFVIIADSGDISLDKPLD 280
Query: 78 DEGGLSST------------------ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
E + T VN+ V+ +N+ P F + Y S+PE G
Sbjct: 281 KETIENYTLVLIVTDMGIPPLESIKRMVVNVIVSGVNEHAPRFLNEFYNASIPENLPLGT 340
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
++ RV A + D A Y + + F+V+ TGDI + LDYE ++ Y
Sbjct: 341 SIVRVRAVEDDVSVGARFIYVIKDAASSKVFLVN-QTGDITLARELDYETRRRY 393
>gi|348503596|ref|XP_003439350.1| PREDICTED: cadherin-18 [Oreochromis niloticus]
Length = 796
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 80/172 (46%), Gaps = 31/172 (18%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EH 72
E+G +++QV ATD D +G R++ + YF++DP T EH
Sbjct: 174 EVGTSVLQVTATDADDPTYG-NSARIVYSILQGQPYFSVDPKTGIIRTALANMDREAREH 232
Query: 73 QGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
+ GGLS + T+NI +TD+ND P+F Y+ VPE Q G VG++
Sbjct: 233 YTVVIQAKDMAGQVGGLSGSTTINITLTDVNDNPPKFPQKNYQLYVPESAQVGKPVGKIK 292
Query: 125 ATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D G NA + YS+ I D G I K L++E+++ Y
Sbjct: 293 ANDEDLGVNADIRYSIINSEGANMFSISADRDTREGIISLKKPLNFERKKTY 344
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 26/139 (18%)
Query: 37 KATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIN 96
K+ D++ ++ + LD NT+ A L+P +E I+V DIN
Sbjct: 115 KSLDRERKTHYVLHAQALDRNTEEA----LEPKSEFI----------------IKVQDIN 154
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP-FVVDAN 151
D P+F P+ SVPE + G +V +V ATDAD+ G +A + YS+ + P F VD
Sbjct: 155 DNAPKFPDGPFVASVPEMSEVGTSVLQVTATDADDPTYGNSARIVYSILQGQPYFSVDPK 214
Query: 152 TGDIRTNKA-LDYEKQQLY 169
TG IRT A +D E ++ Y
Sbjct: 215 TGIIRTALANMDREAREHY 233
Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI K+LD E++ Y+
Sbjct: 69 GPDAQYVGKLHS-NSDKGDGSVRYILSGEGAGTIFIIDEVTGDIHATKSLDRERKTHYV 126
>gi|405953857|gb|EKC21435.1| Protocadherin Fat 4 [Crassostrea gigas]
Length = 2261
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 60/106 (56%), Gaps = 9/106 (8%)
Query: 76 IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAV 135
+QD+ GL++ T+ I V D+ND NP F Y FSV EG+ VG V ATD+D G NA+
Sbjct: 558 VQDQSGLTAQTTLTIIVQDVNDNNPVFIPTSYTFSVFEGRTNEPVGTVTATDSDTGANAL 617
Query: 136 VYYSV-------PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
V Y + ++ F+ +TG I T ALDYE +Q ++ V
Sbjct: 618 VNYQISPYSSTDSANLFFI--TSTGAITTATALDYEVKQRHVILVL 661
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 88/188 (46%), Gaps = 30/188 (15%)
Query: 3 PCPIPSALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAA 61
P IP++ S+F G R +G V ATD D+G LV Y++ ++TD+A
Sbjct: 582 PVFIPTSYTF---SVFEG---RTNEPVGT----VTATDSDTGANALVNYQISPYSSTDSA 631
Query: 62 SYF------------NLDPATEHQGPI---QDEGGLSS---TATVNIRVTDINDKNPEFQ 103
+ F LD + + I +GG+SS TATV I V D+ D P F
Sbjct: 632 NLFFITSTGAITTATALDYEVKQRHVILVLGTDGGVSSRTGTATVTINVQDVQDVIPLFT 691
Query: 104 SLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALD 162
E S+PE Q G +V +V A D D + +S + F +++N+G I N+ L
Sbjct: 692 ETNIERSIPERQPTGTSVAQVLAIDQDTVDSITYKFSTGDFTVFNINSNSGVITNNQLLQ 751
Query: 163 YEKQQLYL 170
YE + Y+
Sbjct: 752 YETRSRYV 759
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 68/162 (41%), Gaps = 25/162 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH-QGPIQDEGGL--------- 82
L+ VKATD DSG FG + Y + + + AS F + P+++ Q I G +
Sbjct: 391 LLDVKATDDDSGAFGDIAYTIQSVSNNGASKFTIQPSSQQGQATISCVGTVAEGEIYVIM 450
Query: 83 --------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
S++ V + VT + + P S + SV E ++ V A D
Sbjct: 451 VQATDQGQPIAERRSTSVPVEVTVTPLGTRPPVIDSAAFTISVSEAVPLSSSLWTVPARD 510
Query: 128 ADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ + + F++++ TG++RT + L+ E Y
Sbjct: 511 PEGLPLTFTITAGNNNSDFIINSTTGELRTARRLNREGTPQY 552
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 81/176 (46%), Gaps = 27/176 (15%)
Query: 25 DKHELGVTLMQVKATDKDS-GKFGLVEYRLLDNNTDAASYFNLDPAT------------- 70
+ +LGVT+ V ATD+D+ ++ Y++ +T A++YF +D T
Sbjct: 1841 ESQDLGVTIATVTATDRDTQSPHNVIRYQMFA-STPASNYFGIDSQTGNIFVKRDLTLDT 1899
Query: 71 --EHQGPIQ--DEGGLSSTATVNIRVT-DI--NDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
+ +Q D G S T+ +N VT DI N ++P F P+ ++PE G +V +
Sbjct: 1900 SNRYLMYVQAYDIGSPSKTSVINATVTIDIYRNLRDPFFSGEPFAANIPETSVIGTSVLQ 1959
Query: 123 VHATDADEGQ--NAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
V+ D+D N V ++ +D + F + G I N L + +Y R+
Sbjct: 1960 VNFGDSDTNAPFNTVTVSAIGDDKALTFFRLESNGQINVNSDLKADSLDIYTLRIL 2015
Score = 35.4 bits (80), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 25/133 (18%)
Query: 25 DKHELGVTLMQVKATDKDSG-----KFGLVEYRLLDNNTDAASYFN------------LD 67
++ G ++ QV A D+D+ KF ++ + + N+++ N +
Sbjct: 701 ERQPTGTSVAQVLAIDQDTVDSITYKFSTGDFTVFNINSNSGVITNNQLLQYETRSRYVF 760
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF----SVPEGQDGLAVGRV 123
T +G + LS+TATV I + DIN+ P Q++P ++P G + L+ +
Sbjct: 761 TVTTAEG--ESSNALSATATVTINIQDINNYPPVIQAVPSNLQFLENIPMGTELLS--SI 816
Query: 124 HATDADEGQNAVV 136
TDAD N V
Sbjct: 817 AVTDADAQINVNV 829
Score = 35.4 bits (80), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDS-GKFGLVEYRLLDNNTDAASYFNLDPATEHQ 73
D Y ++ +G QV ATD D+ + Y++ ++ T A +YF L P T H
Sbjct: 2044 DRRIYNGTVLEQDRIGRPFTQVTATDSDTQAPNNQIMYKITESETPAINYFYLHPQTGHI 2103
Query: 74 GPIQDEGGLSSTATVNIRVTD 94
Q G + NI TD
Sbjct: 2104 SLKQCLNGTDNRFIFNITATD 2124
>gi|348538599|ref|XP_003456778.1| PREDICTED: cadherin-12-like [Oreochromis niloticus]
Length = 848
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 83/185 (44%), Gaps = 31/185 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + G + QV ATD D +G R++ + YF++DP T
Sbjct: 189 YSASVPEMSPAGTYVTQVTATDADDPTYG-NSARIVYSILHGQPYFSVDPKTGIIRTALA 247
Query: 71 --------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
E+Q +Q + GGL+ST +NI +TD+ND P F + VPE
Sbjct: 248 NMDREVKEEYQVLLQAKDMGGQLGGLASTTIINITLTDVNDNPPRFTKSIFHLHVPESAS 307
Query: 117 -GLAVGRVHATDADEGQNAVVYYS-VPEDIPFVVD------ANTGDIRTNKALDYEKQQL 168
G AVGR+ A D D G NA V ++ VP D + D + G + K LDYE Q
Sbjct: 308 LGAAVGRIQAQDLDVGSNARVDFAIVPGDEGNMFDIISNGQSQEGIVVLKKTLDYETQAS 367
Query: 169 YLERV 173
Y +V
Sbjct: 368 YTFKV 372
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 54/95 (56%), Gaps = 8/95 (8%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY SVPE G V +V ATDAD+ G +A + YS+ P
Sbjct: 172 IKVQDINDNEPQFPDGPYSASVPEMSPAGTYVTQVTATDADDPTYGNSARIVYSILHGQP 231
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLYLERVFLISK 178
F VD TG IRT A +D E ++ Y +V L +K
Sbjct: 232 YFSVDPKTGIIRTALANMDREVKEEY--QVLLQAK 264
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
VG++H T+ D+G NAV Y E + F +D TGDI LD EK+ Y
Sbjct: 99 VGKLH-TEMDQGDNAVKYTLSGEGVGSVFTIDQVTGDIHAQMVLDREKKSYY 149
>gi|26337531|dbj|BAC32451.1| unnamed protein product [Mus musculus]
Length = 337
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 68/139 (48%), Gaps = 30/139 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 173 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALHNMDREA 228
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG
Sbjct: 229 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVG 288
Query: 122 RVHATDADEGQNAVVYYSV 140
++ A DAD G NA + YS+
Sbjct: 289 KIKANDADTGSNADMTYSI 307
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 207 YFSVDPKTGVIRTALHNMDREAREHY 232
Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 68 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 125
>gi|297285835|ref|XP_002808368.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3-like [Macaca mulatta]
Length = 4191
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 84/176 (47%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGP 75
Y A R+ +++V ATD+D GLV Y ++ N+ +F +D T + P
Sbjct: 621 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRG--HFAIDSLTGEIQVVAP 678
Query: 76 I--------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ QD G ++T +I+V DIND P F S P++ SV E G
Sbjct: 679 LDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSVLENAPLG 738
Query: 118 LAVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+V + A DAD G+NA + YS V D PFV+++ TG + + LD E + Y
Sbjct: 739 HSVIHIQAVDADHGENARLEYSLTGVASDTPFVINSATGWVSVSGPLDRESVEHYF 794
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQG 74
+++Q+ ATD+D+ G V+Y N D F ++P + E
Sbjct: 1050 SVLQISATDRDAHANGRVQY-TFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTA 1108
Query: 75 PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G L + ++ + V D+ND P F + +E V E G V ++ A D DEG
Sbjct: 1109 YAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDEG 1168
Query: 132 QNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE +Q Y+
Sbjct: 1169 PNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYV 1210
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 32/185 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPAT----- 70
Y R+ E G ++Q++ATD D+ + YR + AA+ F +DP +
Sbjct: 509 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLIST 568
Query: 71 ------EH------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH QG Q+ G S+T V+I V D ND P+F Y V
Sbjct: 569 SGRVDREHMESYELVVEASDQG--QEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVR 626
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E + V RV ATD D+ N +V+Y++ F +D+ TG+I+ LD+E ++
Sbjct: 627 EDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVVAPLDFEAERE 686
Query: 169 YLERV 173
Y R+
Sbjct: 687 YALRI 691
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V+I +TD N P FQS Y SV E + G + + A+D D G+NA + Y + +++P
Sbjct: 915 VHINITDANTHRPVFQSAHYSVSVNEDRPVGSTIVVISASDDDVGENARITYLLEDNLPQ 974
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DA++G I LDYE Q Y
Sbjct: 975 FRIDADSGAITLQAPLDYEDQVTY 998
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 29/180 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT------- 70
Y + + G +++V A D D+G+ G + Y L N+ + F++DP +
Sbjct: 401 YQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 460
Query: 71 --------EH--QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
H + QD G LS+T V + V D ND +P F+ Y ++ E ++G
Sbjct: 461 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRENVEEG 520
Query: 118 LAVGRVHATDADEGQNAVVYY--------SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ ++ ATD D NA + Y F +D +G I T+ +D E + Y
Sbjct: 521 YPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESY 580
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEH 72
S Y + +G T++ + A+D D G+ + Y L DN F +D A
Sbjct: 931 SAHYSVSVNEDRPVGSTIVVISASDDDVGENARITYLLEDN----LPQFRIDADSGAITL 986
Query: 73 QGPIQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQD 116
Q P+ E ++ T + R V D+ND P+F + Y V E
Sbjct: 987 QAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAP 1046
Query: 117 GL-AVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ++ ATD D N V Y+ D F ++ +G +RT + LD E +Y
Sbjct: 1047 PFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVY 1104
Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 73/177 (41%), Gaps = 30/177 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGPI--------- 76
LG +++ ++A D D G+ +EY L +D F ++ AT GP+
Sbjct: 737 LGHSVIHIQAVDADHGENARLEYSLTGVASDTP--FVINSATGWVSVSGPLDRESVEHYF 794
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDA 128
+D G LS++A+V + V D+ND PEF Y + E G +V V A D
Sbjct: 795 FGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGTSVVSVTAVDR 854
Query: 129 DEGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
D N+ + Y + G + LDY KQ+ Y + V S A
Sbjct: 855 DA--NSAISYQITGGNTRNRFAISTQGGVGLVTLALPLDY-KQERYFKLVLTASDRA 908
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 99 NPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDAN 151
+P+F Y+ VPE + G AV RV A D D G+ + YS+ + F +D
Sbjct: 393 HPQFPQYNYQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQ 452
Query: 152 TGDIRTNKALDYEKQQLYLERV 173
+G IRT ALD E + + RV
Sbjct: 453 SGLIRTAAALDRESMERHYLRV 474
>gi|47085727|ref|NP_998132.1| protocadherin Fat 1 precursor [Danio rerio]
gi|27463074|gb|AAO15696.1|AF469608_1 protocadherin [Danio rerio]
Length = 4610
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 83/175 (47%), Gaps = 23/175 (13%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------ 71
FY + G ++QV ATD D + Y LL ++ +F++D T
Sbjct: 3025 FYMESVPEDSPAGRLILQVSATDADIRSNAQISYELLGPGSE---HFSIDSETGELKTLL 3081
Query: 72 ---------HQGPIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
H+ ++ D GG A V I V D+ND P+F + PY F+V E +
Sbjct: 3082 PLDREEEEVHKMKVRALDGGGRFCEAEVEITVEDVNDNPPQFTTDPYTFTVFENTEINTP 3141
Query: 120 VGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLYLER 172
V R++A+D D G NA + YS+ + D F ++ TG +R ++ LD E Q LY R
Sbjct: 3142 VARLYASDLDTGANAEIMYSLLDSADGVFSIEEETGVVRLDRPLDRELQSLYTLR 3196
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 25/170 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNN-------TDAASYFNLDP-----ATEHQGPI 76
+G + + +ATD DSG +G + Y ++++ ++ F L+ A E PI
Sbjct: 2504 VGTLVAEAQATDDDSGTYGRLTYHIVNDIAKDKFSISENGEIFTLESLDRENALEKVIPI 2563
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEG 131
+D GG TVN+ +TDIND P+F++ Y +V + G + ++ A+D DEG
Sbjct: 2564 SLIAKDGGGKVGFCTVNVILTDINDNAPQFRAADYRVNVASDVPRGTTILKIAASDMDEG 2623
Query: 132 QNAVVYYSVPEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
NA + YS+ D F + +G I T ++L + QLY FL+
Sbjct: 2624 SNADITYSIETDADNVEGNFEIHQFSGVIVTKESLIGLENQLY---TFLV 2670
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 28/175 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------------------NTD 59
Y + +G ++QV+A DKD G G+V Y +L + + +
Sbjct: 824 YSVEISESSTVGTEVIQVEAKDKDLGDNGVVRYSILADTDQFAIDTETGIVTVKKPLDRE 883
Query: 60 AASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD--- 116
F L A Q + + L ST + I + D+ND P+F +P + V +D
Sbjct: 884 VQPVFVLKIAARDQATAEPQ--LVSTVLLKITLEDVNDNPPKF--IPPNYHVRVREDLPI 939
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
G + + A D D G ++ V YS+ + D F VD +G +R + LDYEK+Q+Y
Sbjct: 940 GTVIMWLEAHDPDVGPSSQVRYSLIDSGDGKFEVDKLSGAVRIVQNLDYEKKQVY 994
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 7/99 (7%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVP--EDI 144
V I V D+N+ PEF+ Y+ S+ E G +V V ATD D G+N V YS+
Sbjct: 447 VIIDVIDVNNNGPEFKQTSYKASLDENMPTGTSVLTVKATDLDSGENGYVTYSIANVNSQ 506
Query: 145 PFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSY 183
PFV+D +G I +++ LDYE + R++ + A+ +
Sbjct: 507 PFVIDYFSGVISSSETLDYE----LMPRIYTLKVRASGW 541
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 68/148 (45%), Gaps = 15/148 (10%)
Query: 35 QVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTD 94
+V D SG L + LD+ + L +E++G + S ++I+V D
Sbjct: 2746 EVFVVDPSSGSLKL--DKKLDHESTKWYQLTLQAQSEYEG-----SKVVSAVDISIQVKD 2798
Query: 95 INDKNPEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAVVYYSV-----PEDIP--F 146
+ND P F+S PYE F V G V +V ATD D G N V Y++ DI F
Sbjct: 2799 VNDNRPLFESNPYEAFVVENLPGGTCVIQVKATDLDSGTNGHVVYNLDPNQETRDIVELF 2858
Query: 147 VVDANTGDIRTNKALDYEKQQLYLERVF 174
+++ +G I T K LD E + Y V
Sbjct: 2859 AINSESGWITTLKELDRETRNKYTVSVL 2886
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQ---GPIQDEGG---- 81
+G ++ + A+D DSG G + Y + + DA S F +D + P+ E
Sbjct: 730 VGARIVHLSASDSDSGFNGKLVYVI--SGGDAESRFIIDMDSGWLKVFAPLDRETTDHYT 787
Query: 82 -----------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
SS+ +++++ D ND P+F Y + E G V +V A D D
Sbjct: 788 LNITVYDLVPQKSSSRLLDVKILDANDNGPQFLKETYSVEISESSTVGTEVIQVEAKDKD 847
Query: 130 EGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYLERV 173
G N VV YS+ D F +D TG + K LD E Q +++ ++
Sbjct: 848 LGDNGVVRYSILADTDQFAIDTETGIVTVKKPLDREVQPVFVLKI 892
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G + V+I + D+ND P F + Y S+ E G +V V ATDAD G N V++Y
Sbjct: 2259 GAKAEVFVDIILEDVNDNPPVFHTKLYNASLSEASVIGTSVLEVSATDADTGNNKVLFYQ 2318
Query: 140 VPEDIP-----FVVDANTGDIRTNKALDYEKQ 166
+ ED F +D +TG I T + LD+E++
Sbjct: 2319 IVEDKDKSFDYFSIDRDTGTIWTTRMLDHEEK 2350
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 23/175 (13%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G ++++V ATD D+G ++ Y+++++ + YF++D T
Sbjct: 2284 LYNASLSEASVIGTSVLEVSATDADTGNNKVLFYQIVEDKDKSFDYFSIDRDTGTIWTTR 2343
Query: 71 --------EHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDG 117
H+ I+ +GG LSS V I V D+ND P F YE +V E G
Sbjct: 2344 MLDHEEKPSHRLLIRAVDGGVPALSSEVMVLIDVMDLNDNTPVFSQNVYEATVSELAPRG 2403
Query: 118 LAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V +V A+DAD + + +S+ E F +D NTG + + + LY
Sbjct: 2404 HFVTQVQASDADISDSGKLEFSILSGNEGQNFAMDPNTGALVISNHRKPHMESLY 2458
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 78/174 (44%), Gaps = 25/174 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++V A +D+ + Y +++ N A F +DP T
Sbjct: 3233 YTATVAEDIPVGTQVLRVHAASRDTEAGTEITYAIINGNERGA--FRVDPQTGGVFVIEP 3290
Query: 71 -----EHQGPIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
H+ + E GG LS ATVNI +TD+ND +P F Y + E + G
Sbjct: 3291 LDYETAHEFYLTVEATDGGTPSLSDLATVNINLTDVNDNSPVFNQDIYSAVISEDAELGK 3350
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V A DAD + V +S+ + PF +D G+++ + LD EK Y
Sbjct: 3351 TVLTVMADDADGPSSNQVRFSIIDGNQGSPFTIDPVRGEVKVARLLDREKTSGY 3404
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 28/140 (20%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
Y A+ + ELG T++ V A D D V + ++D N S F +DP +G ++
Sbjct: 3337 IYSAVISEDAELGKTVLTVMADDADGPSSNQVRFSIIDGN--QGSPFTIDPV---RGEVK 3391
Query: 78 --------------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
D GG SS+AT+N+ V+DIND P F Y + E Q
Sbjct: 3392 VARLLDREKTSGYTLTVLASDNGGPARSSSATINVDVSDINDNPPIFSQANYSIIIQENQ 3451
Query: 116 D-GLAVGRVHATDADEGQNA 134
G +V ++ +D D N
Sbjct: 3452 PIGASVLQLTVSDRDASHNG 3471
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 80/179 (44%), Gaps = 23/179 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN-----TDAAS-----YFNLDP 68
Y R+ +G +M ++A D D G V Y L+D+ D S NLD
Sbjct: 929 YHVRVREDLPIGTVIMWLEAHDPDVGPSSQVRYSLIDSGDGKFEVDKLSGAVRIVQNLDY 988
Query: 69 ATEH----QGPIQDEG---GLSSTATVNIRVTDINDK--NPEFQSLPYEFSVPEGQD-GL 118
+ +D+G LSS+ + + V D+N+ P F S + + E G
Sbjct: 989 EKKQVYSLTAKAKDKGKPISLSSSCHIEVEVVDVNENLYRPLFPSFVDKGFIKEDVPIGT 1048
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERVF 174
+V ++ A D D+G++ + YS+ + F +D +TG IRT + LD+E Y V+
Sbjct: 1049 SVMKITAQDEDKGRDGEIRYSIRDGSGLGIFTIDEDTGVIRTQELLDHETVPHYWLTVY 1107
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 88/186 (47%), Gaps = 37/186 (19%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-- 70
TS+ ++Y ++ + V+++Q++A D D+ + Y++ N +F+++ T
Sbjct: 1136 TSEPVYYPSVMESSPK-DVSIIQIEAFDPDTKSSEKLSYKITSGNPQG--FFSINQKTGL 1192
Query: 71 --------------EH--QGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSV- 111
EH + + D+G S+T V ++V D ND +P+F Y+ +
Sbjct: 1193 VTTTSRKLDREQQDEHILEITVSDQGVPAKSTTVRVIVKVLDENDNSPQFMEKVYKIKLP 1252
Query: 112 ----PEGQDGLA---VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNK-- 159
PE + L V RV A+D DEG NA + YS+ E F ++ TG + + K
Sbjct: 1253 VREKPEKERALKRDPVYRVIASDKDEGPNAEISYSIEEGDEQGKFFIEPKTGMVYSKKAS 1312
Query: 160 -ALDYE 164
A+DY+
Sbjct: 1313 SAVDYD 1318
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE--DI 144
V I+V D ND P F Y S+PE +V +V ATDAD G N YYS E D+
Sbjct: 133 VRIQVLDTNDLRPLFSPTAYSISLPENTAIRTSVAKVMATDADIGTNGEYYYSFREWTDM 192
Query: 145 PFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
F V +G + LDY + + Y + + +
Sbjct: 193 -FSVHPTSGVVTLTGKLDYSETKQYELEILAVDR 225
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 65/159 (40%), Gaps = 22/159 (13%)
Query: 33 LMQVKATDKD------------SGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI---- 76
++++ ATD+D + F L ++RL + LD T HQ +
Sbjct: 1472 VLRISATDQDEKNKLTYTLLSSTDPFSLRKFRLDPGTGVLYTAERLDHETMHQHTLTVMV 1531
Query: 77 --QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQN 133
QD + V + V D ND P F PY V E G AV +V A D D+GQN
Sbjct: 1532 RDQDIPVKRNLVRVIVNVQDTNDNAPWFSGAPYVGRVFESAATGSAVLQVSALDKDKGQN 1591
Query: 134 AVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLY 169
A + YS+ F +D G I K LD + +
Sbjct: 1592 AEIIYSIESGNVANSFAIDPVLGTITVAKELDRNNKNRF 1630
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 70/168 (41%), Gaps = 28/168 (16%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------------- 70
E+ + ++ A+D D+G + Y LLD+ A F+++ T
Sbjct: 3137 EINTPVARLYASDLDTGANAEIMYSLLDS---ADGVFSIEEETGVVRLDRPLDRELQSLY 3193
Query: 71 EHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
+ D G LSS +++ + DIND P F+ Y +V E G V RVHA
Sbjct: 3194 TLRAQATDRGSPRHLSSQTLLSVSILDINDNPPVFERREYTATVAEDIPVGTQVLRVHAA 3253
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE-KQQLYL 170
D + Y++ E F VD TG + + LDYE + YL
Sbjct: 3254 SRDTEAGTEITYAIINGNERGAFRVDPQTGGVFVIEPLDYETAHEFYL 3301
Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 11/101 (10%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ--DGLAVGR------VHATDADEG 131
GL+S T+ I + D ND P F + V E + + + + + A D D
Sbjct: 1740 AGLASNTTLLIHLKDENDNAPVFIQDQFAGMVSESSPVNSVVLTKDNTPLVIRALDTDRD 1799
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
N+ + Y + E F +D++TG IRT LDYE++ ++
Sbjct: 1800 ANSRLVYQIVEPFAHNYFAIDSSTGAIRTISELDYEQRSVF 1840
Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEGQNAVVYYSVPE 142
A V I + D+ND P+F YE +V G+ V V+A+DAD G N+ ++YS+ E
Sbjct: 1860 ANVTIEILDVNDCPPQFSQDLYETTVLVPTYKGVEVITVNASDADSGPNSRLFYSIVE 1917
Score = 38.9 bits (89), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 88 VNIRVTDINDKNPEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDIPF 146
V + V D+ND P F +LPY+ + + + +V A DAD +NA + Y + E F
Sbjct: 2064 VTVIVEDVNDNPPVFVNLPYQALAQVDADVDHIITKVTAVDADINENAEINYHLQELNEF 2123
Query: 147 VVDANTGDIRTNKALD 162
V + G+I K LD
Sbjct: 2124 VQISTDGEISLTKKLD 2139
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 80/198 (40%), Gaps = 35/198 (17%)
Query: 3 PCPIPSALEMTSDSLFY--GAMARD--KHELGV---------TLMQVKATDKDS----GK 45
P P PS + + D FY M D H LGV ++ + DS GK
Sbjct: 1344 PKPEPSTVPLVFDEPFYTFSVMESDTVSHMLGVISLEPVDTPVWFEITGGNSDSRFEVGK 1403
Query: 46 FG--LVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQ 103
++ + LD + S++NL +G S + V I+V D N+ P+F
Sbjct: 1404 ASGTMIVAQALD--AEQKSHYNLTVNAT-------DGTRSVSTQVLIKVIDTNNHRPQFS 1454
Query: 104 SLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDIPFV-----VDANTGDIRT 157
YE V E V R+ ATD DE +N + Y + PF +D TG + T
Sbjct: 1455 KPKYEVDVSEDTPPETEVLRISATDQDE-KNKLTYTLLSSTDPFSLRKFRLDPGTGVLYT 1513
Query: 158 NKALDYEKQQLYLERVFL 175
+ LD+E + V +
Sbjct: 1514 AERLDHETMHQHTLTVMV 1531
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 32/169 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ----------- 77
+G ++M++ A D+D G+ G + Y + D + F +D E G I+
Sbjct: 1046 IGTSVMKITAQDEDKGRDGEIRYSIRDGS--GLGIFTID---EDTGVIRTQELLDHETVP 1100
Query: 78 ---------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHA 125
D G LSS V I V D+ND P+ Y SV E +++ ++ A
Sbjct: 1101 HYWLTVYATDRGVVPLSSFVEVYIEVQDVNDNAPQTSEPVYYPSVMESSPKDVSIIQIEA 1160
Query: 126 TDADEGQNAVVYYSVPEDIP---FVVDANTGDI-RTNKALDYEKQQLYL 170
D D + + Y + P F ++ TG + T++ LD E+Q ++
Sbjct: 1161 FDPDTKSSEKLSYKITSGNPQGFFSINQKTGLVTTTSRKLDREQQDEHI 1209
Score = 35.8 bits (81), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 28/157 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EH 72
G ++QV A DKD G+ + Y + N A+ F +DP E
Sbjct: 1575 GSAVLQVSALDKDKGQNAEIIYSIESGN--VANSFAIDPVLGTITVAKELDRNNKNRFEL 1632
Query: 73 QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADE 130
D+G LS TA V+I VT ++ P+F EFS + L V A+
Sbjct: 1633 TVKASDKGTPPLSGTAAVDITVTISDNAIPKFAE--KEFSAEVSETVLPGAFVSLVTAN- 1689
Query: 131 GQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYE 164
+ V+Y + + + F ++ N+G + T+ LDYE
Sbjct: 1690 -SQSSVFYQIKDGNVNGAFDINPNSGVVVTHSVLDYE 1725
>gi|126330664|ref|XP_001369066.1| PREDICTED: protocadherin Fat 4 [Monodelphis domestica]
Length = 4980
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 76/161 (47%), Gaps = 23/161 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F++DP + E +
Sbjct: 1754 GSRIMQLTAMDADEGANALVTYAIISGADDS---FHIDPESGELIATKRLDRERRSKYSL 1810
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G SS +NI ++D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1811 LVRADDGLQSSDMRINITISDVNDHIPKFSRPVYSFDIPEDTTPGSLVAAILATDDDSGV 1870
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYL 170
N + Y+V ED F ++ TG ++LDYE QQ Y+
Sbjct: 1871 NGEITYTVSEDDEDGIFFLNPVTGVFNLTRSLDYETQQYYI 1911
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 85/170 (50%), Gaps = 30/170 (17%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------- 70
+ +G + V A D+D+ GL+ Y + N D F ++ +T
Sbjct: 3100 ESQSVGSVVRTVSARDRDAAMNGLLTYHISSGNEDG--LFAINASTGALILAKPLDYELH 3157
Query: 71 -EHQGPIQ--DEGGLSSTA--TVNIRVTDINDKNPEFQSLPYEFS---VPEGQDGLAVGR 122
+H+ I D G ++ T+ ++ I V D+ND +P F +P E+S + G V R
Sbjct: 3158 QKHEMTISATDGGWVARTSYCSIIINVLDVNDNSPVF--VPEEYSPTVLENAPSGTTVMR 3215
Query: 123 VHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ YS+ D+ FV+D N+G I T LDYE +Q Y
Sbjct: 3216 LNATDADSGSNAVIAYSLQSSDSDL-FVIDPNSGIITTQGFLDYETKQSY 3264
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 24/163 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ-------------- 77
TL+ V A DKDSG G +EY +++ N + + F++ +T I+
Sbjct: 2686 TLLTVSAMDKDSGPNGQLEYSIVNGNIENS--FSIHHSTGEIKSIRSLDREKVSQYVLTV 2743
Query: 78 ---DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D+G S+T TV I V D ND P F + + VPE G V RV +D D G
Sbjct: 2744 RASDKGTPSQSTTVTVIINVLDENDNAPRFSQI-FTAPVPENAPLGYTVTRVTTSDEDVG 2802
Query: 132 QNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA+ YS+ + +PF ++ +TGDI ++ L+ E Y RV
Sbjct: 2803 VNAISRYSIIDTSLPFSINPSTGDIIISRPLNREDTDRYRIRV 2845
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 74/163 (45%), Gaps = 33/163 (20%)
Query: 38 ATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGGLSSTAT--- 87
ATD D G G+ YR++ N A F LD G + +GGL AT
Sbjct: 159 ATDADIGSNGVDHSSYRIVGGN--EAGRFRLDITLNPSGEGAFLHLVSKGGLDREATAQY 216
Query: 88 -------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
VN+ V DIND P F+S Y+ VPE G +V +V A D
Sbjct: 217 QLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFRSSHYQAGVPEDAVVGSSVLQVTAAD 276
Query: 128 ADEGQNAVVYYSVPED-IPFVVDANTGDIRTNKALDYEKQQLY 169
ADEG NA + Y + ED PF +D TG I + LDYE ++ Y
Sbjct: 277 ADEGTNADIRYQLQEDGGPFHMDPETGLITVREPLDYEARRQY 319
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 76/168 (45%), Gaps = 22/168 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y ++D + F+++P+T
Sbjct: 2774 SQIFTAPVPENAPLGYTVTRVTTSDEDVGVNAISRYSIIDTSLP----FSINPSTGDIII 2829
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V I VTD+ND P F+ Y PE + G
Sbjct: 2830 SRPLNREDTDRYRIRVSAHDSGWTVSTDVAIFVTDVNDNAPRFKKPSYYLDCPELTEIGA 2889
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
V +V ATD DEG N V+Y + F ++A TG+I +AL Y
Sbjct: 2890 KVAQVSATDPDEGSNGQVFYFIKSQSEFFRINATTGEIYNKQALKYRN 2937
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 74/157 (47%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +ATD+DSG +EY LL+ + S +D G + D
Sbjct: 2067 VFKAQATDRDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTIVATD 2126
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ V + + DIND NP F Y+ + E G + +V+A D DEG N
Sbjct: 2127 KGQPALSSSTEVAVIILDINDNNPIFAQALYKVEIDENTLTGTDIVQVYAADGDEGTNGQ 2186
Query: 136 VYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V YS+ E+ F +D+ TG + K LD EK+ Y
Sbjct: 2187 VRYSLLRGNENHEFRMDSVTGILSVAKPLDREKKAAY 2223
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 77/171 (45%), Gaps = 22/171 (12%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------ 68
D L Y + + +V+A+D+DSG G + Y +++ NT A F + P
Sbjct: 995 DQLSYEVTLSEAQPVNSLFFKVQASDQDSGANGEIAYSIVEGNTGNA--FGIFPDGQLYV 1052
Query: 69 ATEHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+E +QD LS+T V + + D+ND P F S Y F E Q+
Sbjct: 1053 KSELDRELQDRYVLVVVASDRAVEPLSATVNVTVVLEDVNDNRPLFNSTNYVFYFEEEQE 1112
Query: 117 GLA-VGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
G + VG ++A D D G N V YS P F ++A TG+I + D E
Sbjct: 1113 GGSFVGMINAIDKDFGPNGEVRYSFENMQPDFELNAITGEITSTHQFDRES 1163
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 74/164 (45%), Gaps = 32/164 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T+M++ ATD DSG ++ Y L +++D F +DP + G I +G L
Sbjct: 3210 GTTVMRLNATDADSGSNAVIAYSLQSSDSD---LFVIDP---NSGIITTQGFLDYETKQS 3263
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHAT 126
S ATVNI + N+ P F S Y F + E G VG V A+
Sbjct: 3264 YHLTVKAFNVPDEERCSFATVNIHLKGTNEYVPRFVSKLYYFEISEAASKGSVVGEVFAS 3323
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQ 167
D D G + V+Y + F +++ TG I + LD EK++
Sbjct: 3324 DRDMGTDGEVHYLIFGTSRKKGFQINSRTGQIYVSGVLDREKEE 3367
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 75/160 (46%), Gaps = 25/160 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------EHQGP------IQ 77
+++V A+D D G G + Y ++ N + F +D AT +H+ IQ
Sbjct: 1227 VLRVSASDVDEGSNGQIHYSVVKGNEE--KMFAIDSATGQVSLAGQLDHEATSSYSLLIQ 1284
Query: 78 --DEGGLS--STATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQ 132
D G +S ST T++I + D ND P F V E + G V V ATD+D G
Sbjct: 1285 AVDSGAVSLNSTCTLSIDILDENDNTPSFPKSTLFVDVLENMRIGELVTSVTATDSDSGD 1344
Query: 133 NAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
NA ++YS+ F + NTG I K LD+E Q LY
Sbjct: 1345 NADIHYSITGTNNHGTFSISPNTGGIFLAKKLDFETQPLY 1384
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 75/159 (47%), Gaps = 24/159 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI----Q 77
T++QV A D D G + Y L+ N D A + LD T+ + +
Sbjct: 2276 TILQVVARDDDQGPNSKLTYMLIGGNEDNAFILSASGELKVIQSLDRETKEKCILLITAT 2335
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSV----PEGQDGLAVGRVHATDADEG 131
D G L+ T TVN+ V D+ND P F Y ++ P G D L V+A+DAD
Sbjct: 2336 DSGSPALTGTGTVNVIVDDVNDNIPTFAHKMYSATISEDAPTGSDVLL---VNASDADAS 2392
Query: 132 QNAVVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
NAV+ Y + + F ++ +TG I T+ LD E ++ Y
Sbjct: 2393 TNAVISYRLIGGNSQFTINPSTGQIITSALLDRETKENY 2431
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 74/167 (44%), Gaps = 32/167 (19%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI---------- 76
+G L++V A D KD G VEY + +N F LD T G I
Sbjct: 2997 RVGTKLIKVTAVDDKDFGANSEVEYFI--SNESPVEKFKLDSTT---GWISVASSLMSNL 3051
Query: 77 ----------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRV 123
+D+G LSS ATV I VT+ N +PEF +VPE Q G V V
Sbjct: 3052 NQNFMMTVTARDKGNPPLSSQATVQIVVTEENYHSPEFSQSHMSTTVPESQSVGSVVRTV 3111
Query: 124 HATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQ 167
A D D N ++ Y + ED F ++A+TG + K LDYE Q
Sbjct: 3112 SARDRDAAMNGLLTYHISSGNEDGLFAINASTGALILAKPLDYELHQ 3158
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 38/174 (21%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQG 74
+ + G ++ Q KA D D G G+V Y L N + F +D P H G
Sbjct: 902 ENWQAGHSIFQAKALDPDEGVNGMVLYSLKQN---PKNLFTIDEKNGNISLLRPLDVHTG 958
Query: 75 PIQ------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV-GRVHA 125
Q D G LSS+ + + + D+ND P F L YE ++ E Q ++ +V A
Sbjct: 959 SYQVEILASDRGVPQLSSSFILTVSIHDVNDNPPVFDQLSYEVTLSEAQPVNSLFFKVQA 1018
Query: 126 TDADEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYL 170
+D D G N + YS +V+ NTG+ + LD E Q Y+
Sbjct: 1019 SDQDSGANGEIAYS-------IVEGNTGNAFGIFPDGQLYVKSELDRELQDRYV 1065
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 73/177 (41%), Gaps = 38/177 (21%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD------------------------- 59
++ E G + + A DKD G G V Y + D
Sbjct: 1109 EEQEGGSFVGMINAIDKDFGPNGEVRYSFENMQPDFELNAITGEITSTHQFDRESLMRQR 1168
Query: 60 AASYFNLDPATEHQG---PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
A+ F+ QG P++D+ A V + + DIND P+F Y+ ++ E
Sbjct: 1169 GAAVFSFTVIASDQGLPKPLKDQ------AVVQVYMKDINDNAPKFLKDLYQATISELAA 1222
Query: 117 GLA-VGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
L V RV A+D DEG N ++YSV E+ F +D+ TG + LD+E Y
Sbjct: 1223 NLTQVLRVSASDVDEGSNGQIHYSVVKGNEEKMFAIDSATGQVSLAGQLDHEATSSY 1279
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 74/162 (45%), Gaps = 27/162 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQDEGGLS--- 83
G ++QV A D D G G V Y LL N + F +D T P+ E +
Sbjct: 2168 GTDIVQVYAADGDEGTNGQVRYSLLRGNENHE--FRMDSVTGILSVAKPLDREKKAAYSL 2225
Query: 84 -------------STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDA 128
T TV I + DIND P F+ PY +VPE L + +V A D
Sbjct: 2226 TVQSVDRGSSPRMDTTTVEIILLDINDFVPVFELSPYSINVPENLGTLPKTILQVVARDD 2285
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQ 167
D+G N+ + Y + ED F++ A +G+++ ++LD E ++
Sbjct: 2286 DQGPNSKLTYMLIGGNEDNAFILSA-SGELKVIQSLDRETKE 2326
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDE 79
G+++ +L + V T G F + ++ + +S + + + +Q +
Sbjct: 811 GSVSASTMDLNTNITYVITTGDQKGVFTINQFT---GHLTTSSIIDREEQSFYQLKVVAS 867
Query: 80 GGLSSTAT-VNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVY 137
GGL + T VNI V D+ND P F Q++ + V Q G ++ + A D DEG N +V
Sbjct: 868 GGLVTGETLVNITVKDLNDNAPHFLQAVEWVNVVENWQAGHSIFQAKALDPDEGVNGMVL 927
Query: 138 YSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
YS+ P+++ F +D G+I + LD +E
Sbjct: 928 YSLKQNPKNL-FTIDEKNGNISLLRPLDVHTGSYQVE 963
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 23/166 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------------ 77
G L+ ++A+D D G G V + ++ T+ + F LDP + I
Sbjct: 597 GTDLLVIEASDGDLGDNGTVRFSFQESETEQRA-FRLDPVSGRLSTISSLDREEQAFYSL 655
Query: 78 -----DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
D G SS VN+ + D+ND +P F + Y + E + G + V A+D D
Sbjct: 656 LVLAVDLGSPAQSSLTRVNVSLLDVNDNSPVFYPVQYFAHIQENEPAGSYITTVSASDPD 715
Query: 130 EGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
G N V YS+ + F + ++T I T LD E++ Y +V
Sbjct: 716 SGPNGTVKYSISAGDTSGFQIHSHTVAISTRMVLDREEKTAYQLQV 761
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1722 AEVEITLQDINDNPPVFPTDTLDLTVEENIGDGSRIMQLTAMDADEGANALVTYAIISGA 1781
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +G++ K LD E++ Y
Sbjct: 1782 DDSFHIDPESGELIATKRLDRERRSKY 1808
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 68/159 (42%), Gaps = 20/159 (12%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LDPATEH----QG 74
G + + ATD DSG G + Y + +++ D + N LD T+
Sbjct: 1855 GSLVAAILATDDDSGVNGEITYTVSEDDEDGIFFLNPVTGVFNLTRSLDYETQQYYILTA 1914
Query: 75 PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
+D GG T V + D+ND P F Y S+ E G + + TDAD+G N
Sbjct: 1915 HAEDGGGQFMTIRVYFNILDVNDNPPVFSLTSYSTSLMENLPLGSTILIFNVTDADDGPN 1974
Query: 134 AVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ + YS+ F VD N G ++ + LD E Q Y
Sbjct: 1975 SQLSYSITSGDSLGQFTVDKN-GVLKVRQTLDRESQSFY 2012
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 75/186 (40%), Gaps = 29/186 (15%)
Query: 7 PSALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL----------LDN 56
P +TS Y + LG T++ TD D G + Y + +D
Sbjct: 1939 PPVFSLTS----YSTSLMENLPLGSTILIFNVTDADDGPNSQLSYSITSGDSLGQFTVDK 1994
Query: 57 N----------TDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLP 106
N ++ S++NL H P+ +STA V+I + D+ND P F S P
Sbjct: 1995 NGVLKVRQTLDRESQSFYNL-VIQVHDMPLPSASSYTSTAQVSIILLDVNDNAPTFIS-P 2052
Query: 107 YEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDY 163
VPE V + ATD D G N+ + Y++ P F + G++R LD
Sbjct: 2053 KLTYVPENTPTDTVVFKAQATDRDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDR 2112
Query: 164 EKQQLY 169
E+ Y
Sbjct: 2113 EEVSNY 2118
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 77/186 (41%), Gaps = 41/186 (22%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI 76
L Y ++ G + V ATD DSG + Y ++ N +F++ ++H G +
Sbjct: 476 LVYRVNLSEEAPPGSYVSGVSATDGDSGLNANLRYSIISGN--ELDWFHI---SDHSGLV 530
Query: 77 QD--EGGL----SSTATVNIR------------------VTDINDKNPEF-QSLPYEFSV 111
GGL +S +NI V D+ND+ P F Q YE SV
Sbjct: 531 TTAAAGGLDRERASQVVLNISARDQGVHPKVSYAQLVVTVLDVNDEKPVFSQEAGYEVSV 590
Query: 112 ----PEGQDGLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDY 163
P G D L + A+D D G N V +S E F +D +G + T +LD
Sbjct: 591 AENAPAGTDLLV---IEASDGDLGDNGTVRFSFQESETEQRAFRLDPVSGRLSTISSLDR 647
Query: 164 EKQQLY 169
E+Q Y
Sbjct: 648 EEQAFY 653
Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
SS + I V D+ND +P F+ P+ + E + V A D D G N + YS+
Sbjct: 2649 FSSYEKLAIAVMDVNDNSPIFKEDPFVAEILENLSPRTLLTVSAMDKDSGPNGQLEYSIV 2708
Query: 142 E---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ F + +TG+I++ ++LD EK Y+ V
Sbjct: 2709 NGNIENSFSIHHSTGEIKSIRSLDREKVSQYVLTV 2743
Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 70/174 (40%), Gaps = 20/174 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA----------ASYFNLD- 67
Y A ++ G + V A+D DSG G V+Y + +T ++ LD
Sbjct: 692 YFAHIQENEPAGSYITTVSASDPDSGPNGTVKYSISAGDTSGFQIHSHTVAISTRMVLDR 751
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V I V D D P F Y F V E G VG
Sbjct: 752 EEKTAYQLQVVATDGGHLQSPNQAIVTITVLDTQDNPPVFSQATYSFVVFENVALGYHVG 811
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A+ D N + Y D F ++ TG + T+ +D E+Q Y +V
Sbjct: 812 SVSASTMDLNTN-ITYVITTGDQKGVFTINQFTGHLTTSSIIDREEQSFYQLKV 864
Score = 42.4 bits (98), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 25/144 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP-- 75
Y A + G ++ V A+D D+ ++ YRL+ N S F ++P+T
Sbjct: 2366 MYSATISEDAPTGSDVLLVNASDADASTNAVISYRLIGGN----SQFTINPSTGQIITSA 2421
Query: 76 --------------IQDEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-D 116
+ +GG LSS+ +V++ VTD+ND P FQ PY +P
Sbjct: 2422 LLDRETKENYTLIVVSSDGGFPEPLSSSTSVSVTVTDVNDNPPRFQHHPYVTHIPSPTPS 2481
Query: 117 GLAVGRVHATDADEGQNAVVYYSV 140
G V V TD D G N+ ++YS+
Sbjct: 2482 GSFVFSVTVTDPDTGPNSELHYSL 2505
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNAVVYYSV 140
SS A++ I V DIND P F L Y ++ E G V V ATD D G NA + YS+
Sbjct: 454 SSVASLVIFVNDINDHPPVFSQLVYRVNLSEEAPPGSYVSGVSATDGDSGLNANLRYSI 512
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 69/167 (41%), Gaps = 28/167 (16%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPI 76
+G + V ATD DSG + Y + N F++ P T E Q P+
Sbjct: 1327 RIGELVTSVTATDSDSGDNADIHYSITGTNNHGT--FSISPNTGGIFLAKKLDFETQ-PL 1383
Query: 77 -------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
+D+G SST +V I V D ND P F S+ E G +V V A
Sbjct: 1384 YKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPTFPPGDIFKSITENLPIGSSVISVTAH 1443
Query: 127 DADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D D N + Y++ + +P F +D G I T+ +D E L+
Sbjct: 1444 DPDADINGQLTYAIVQQMPRGSHFGIDEVKGTIYTSAEIDREFANLF 1490
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 71/174 (40%), Gaps = 28/174 (16%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDN--------------NTDAASYFNLDPAT--- 70
E+G + QV ATD D G G V Y + N A Y N+ ++
Sbjct: 2886 EIGAKVAQVSATDPDEGSNGQVFYFIKSQSEFFRINATTGEIYNKQALKYRNVTGSSNVN 2945
Query: 71 --EHQGPI--QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRV 123
H + D G L S TV I + D ND P+F + Y V + + G + +V
Sbjct: 2946 INRHSFIVTSSDRGSPSLLSETTVTINIVDSNDNAPQFLNSKYFTPVTKNVRVGTKLIKV 3005
Query: 124 HAT-DADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
A D D G N+ V Y + + P F +D+ TG I +L Q ++ V
Sbjct: 3006 TAVDDKDFGANSEVEYFISNESPVEKFKLDSTTGWISVASSLMSNLNQNFMMTV 3059
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N V Y + +
Sbjct: 1513 VTILVTDLNDNVPIFISQNALAADPSVVIGSILTTIVAADPDEGANGEVEYEIINGDTET 1572
Query: 146 FVVDANTGDIRTNKAL 161
F+VD +GD+R + AL
Sbjct: 1573 FMVDRYSGDLRVSSAL 1588
>gi|395845723|ref|XP_003795574.1| PREDICTED: protocadherin Fat 4 isoform 1 [Otolemur garnettii]
Length = 4982
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 82/170 (48%), Gaps = 22/170 (12%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL+ Y + N + A + +
Sbjct: 3098 ATIPESHSIGAIVRTVSARDRDTAMNGLIRYSISSGNEEGIFALNSSTGILTLAKALDYE 3157
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
+H+ I D G ++ T +V + V D+ND +P F S Y +V E G V
Sbjct: 3158 LCQKHEMMISAVDGGWVARTGYCSVTVNVIDVNDNSPVFLSDEYFPTVLENAPSGTTVIH 3217
Query: 123 VHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y+V D+ FV+D NTG I T LD+E +Q Y
Sbjct: 3218 LNATDADSGTNAVIAYTVQSSDSDL-FVIDPNTGVITTQGFLDFETKQSY 3266
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F +DP + E +
Sbjct: 1756 GSKIMQLTAMDADEGANALVTYTIISGADDS---FRIDPESGDLIATKRLDRERRSKYSL 1812
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQ 132
D+G SS +NI V+D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1813 LVRADDGLQSSDVRINITVSDVNDHTPKFSRPVYSFDIPEDTIPGSLVAAILATDDDSGV 1872
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG + LD+E QQ Y+ V
Sbjct: 1873 NGEITYIVNEDDEDGIFFLNPVTGVFNLTRVLDFEAQQYYILTV 1916
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 77/175 (44%), Gaps = 25/175 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
FY A + +++V A+D D G GL+ Y ++ N + F++D ++ I
Sbjct: 1214 FYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEERQ--FSIDSSSGQVALIG 1271
Query: 78 -----------------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
D G L+ST T+NI + D ND P F V E + G
Sbjct: 1272 KLDYETTPAYSLIIQAVDSGTISLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIG 1331
Query: 118 LAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD+D G NA ++YS+ F + NTG I K LD+E Q LY
Sbjct: 1332 ELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSIFLAKKLDFETQSLY 1386
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 76/167 (45%), Gaps = 33/167 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------------------- 68
G L+ ++ATD+D G G V + L + TD S F LDP
Sbjct: 599 GTELLILRATDRDLGDNGTVGFSLQEAETDQRS-FRLDPVSGRLSTVSSLDREEQAFYSL 657
Query: 69 ---ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVH 124
AT+ P Q SS +N+ + DIND +P F + Y + E + G + + V
Sbjct: 658 LVVATDLGSPPQ-----SSMVRINVSLLDINDNSPVFYPVQYFAHIQENEPGGSYITTVS 712
Query: 125 ATDADEGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ATD D G N V YS+ + F V+A +G I T ALD E++ Y
Sbjct: 713 ATDPDLGPNGTVKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAY 759
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 22/168 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + +Y ++D + F ++P+T
Sbjct: 2776 SQIFSAHVPENSPLGYTVTRVTTSDEDIGMNAISKYSIMDTSLP----FTINPSTGDIVI 2831
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V I VTD+ND P F Y PE + G
Sbjct: 2832 SRPLNREDTDRFRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPELTEIGS 2891
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
V +V ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 2892 RVTQVSATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQILKYQN 2939
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 71/161 (44%), Gaps = 20/161 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +ATD DSG +EY LL+ + S +D G + D
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATD 2128
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y+ + E G + +V A D DEG N
Sbjct: 2129 KGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQ 2188
Query: 136 VYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V Y + + F +D+ TG I K LD EK YL V
Sbjct: 2189 VRYGIVGGNANQEFRIDSVTGAITVAKPLDREKTPTYLLTV 2229
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 38 ATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGGLSSTAT--- 87
ATD D G G+ YR++ N A F LD G + +GGL T
Sbjct: 159 ATDSDIGSNGVDHRSYRIIQGN--EAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQY 216
Query: 88 -------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
VN+ V DIND P F S Y+ VPE G +V +V A D
Sbjct: 217 QLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAAD 276
Query: 128 ADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ADEG NA + Y + E PF +D TG I + LD+E ++ Y
Sbjct: 277 ADEGTNADIRYRLQDEGTPFQMDPETGLITVREPLDFEARRQY 319
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 24/162 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V A DKDSG G ++Y ++ N + + F+++ AT I+
Sbjct: 2689 ILTVSAMDKDSGPNGQLDYEIVKGNEENS--FSINHATGEIRSIRPLDREKVSQYMLTVK 2746
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G S + ++ I + D ND P F + + VPE G V RV +D D G
Sbjct: 2747 SSDKGSPSQSTSIKVIINILDENDNAPRFSQI-FSAHVPENSPLGYTVTRVTTSDEDIGM 2805
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA+ YS+ + +PF ++ +TGDI ++ L+ E + RV
Sbjct: 2806 NAISKYSIMDTSLPFTINPSTGDIVISRPLNREDTDRFRIRV 2847
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 81/188 (43%), Gaps = 23/188 (12%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF---NLDPAT 70
D L Y + + +V+A+DKDSG G + Y + + NT DA F L +
Sbjct: 997 DQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGNTGDAFGIFPDGQLYIKS 1056
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E +QD LS+T V + + D+ND P F S Y F E Q G
Sbjct: 1057 ELDRELQDRYVLLVVAFDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQKAG 1116
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLER---V 173
VG+V A D D G N V Y+ P F + A +G+I D ++ L +R V
Sbjct: 1117 SFVGKVSAVDKDFGPNGEVRYAFEMVQPDFELHAISGEITNTHQFD--RESLMRQRGTAV 1174
Query: 174 FLISKFAT 181
F + AT
Sbjct: 1175 FSFTVIAT 1182
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 78/162 (48%), Gaps = 22/162 (13%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQGPI 76
++G L++V A D KD G VEY + LDN+T S + + +Q +
Sbjct: 2999 KVGTKLIKVTAVDDKDFGLNSEVEYFISNENHLGKFKLDNDTGWISVASSLISDLNQNFL 3058
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D+G LSS ATV I VT+ N PEF ++PE G V V A D
Sbjct: 3059 ITVTAKDKGNPPLSSQATVQITVTEENYHTPEFSQSHMSATIPESHSIGAIVRTVSARDR 3118
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQ 167
D N ++ YS+ E+ F ++++TG + KALDYE Q
Sbjct: 3119 DTAMNGLIRYSISSGNEEGIFALNSSTGILTLAKALDYELCQ 3160
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L ATV++ + DIND P F Y+ ++ E L V RV A+D DEG N +++YS+
Sbjct: 1190 LKDQATVHVYMKDINDNAPRFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSI 1249
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E+ F +D+++G + LDYE Y
Sbjct: 1250 IKGNEERQFSIDSSSGQVALIGKLDYETTPAY 1281
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 80/168 (47%), Gaps = 27/168 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGPI--- 76
G ++QV A D D G G V Y ++ N A F +D P + P
Sbjct: 2170 GTDIIQVFAADGDEGTNGQVRYGIVGGN--ANQEFRIDSVTGAITVAKPLDREKTPTYLL 2227
Query: 77 ----QDEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDA 128
D G + T+TV+I + DIND P F+ PY +VPE + L + +V A D
Sbjct: 2228 TVQATDRGSTPRTDTSTVSIVLLDINDFVPIFELSPYAVNVPENLETLPRTILQVVARDD 2287
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
D+G N+ + Y + ED F + A +G++R ++LD E ++ ++ V
Sbjct: 2288 DQGSNSKISYVLFGGNEDNAFTLSA-SGELRVIQSLDRESKEQFVLTV 2334
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 73/180 (40%), Gaps = 35/180 (19%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPATEHQGPIQ 77
+ + G ++ Q KA D D G G+V Y L N N + L P H G Q
Sbjct: 904 ENWQAGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINEKNGNISLLGPLDVHAGSYQ 963
Query: 78 DE--------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
E LSS+ + + V D+ND +P F L YE ++ E + +V A+D
Sbjct: 964 IEILASDMGVPQLSSSLILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDK 1023
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYLERVFLISKF 179
D G N + Y++ E NTGD + LD E Q Y V L+ F
Sbjct: 1024 DSGANGEIAYTIAE-------GNTGDAFGIFPDGQLYIKSELDRELQDRY---VLLVVAF 1073
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 75/172 (43%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3212 GTTVIHLNATDADSGTNAVIAYTVQSSDSD---LFVIDPNT---GVITTQGFLDFETKQS 3265
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S TVNI++ N+ P F S Y F + E G VG V A+
Sbjct: 3266 YHLTVKAFNVPDEERCSFTTVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFAS 3325
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F ++ TG I + LD EK+ ERV L
Sbjct: 3326 DRDLGIDGEVHYLIFGNSRKKGFQINKKTGQIYVSGILDREKE----ERVSL 3373
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1724 AEVEITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTYTIISGA 1783
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ K LD E++ Y
Sbjct: 1784 DDSFRIDPESGDLIATKRLDRERRSKY 1810
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV- 140
SS ++I V D+ND P F+ P+ + E + V A D D G N + Y +
Sbjct: 2651 FSSYEKLDITVLDVNDNVPIFKEDPFVSEILENLSPRKILTVSAMDKDSGPNGQLDYEIV 2710
Query: 141 --PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
E+ F ++ TG+IR+ + LD EK Y+ V
Sbjct: 2711 KGNEENSFSINHATGEIRSIRPLDREKVSQYMLTV 2745
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 67/158 (42%), Gaps = 22/158 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPIQ---- 77
T++QV A D D G + Y L N D A + LD ++ Q +
Sbjct: 2278 TILQVVARDDDQGSNSKISYVLFGGNEDNAFTLSASGELRVIQSLDRESKEQFVLTVTAT 2337
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE----GQDGLAVGRVHATDADEG 131
D G L+ T T+++ V D+ND P F S Y ++PE G D L V +
Sbjct: 2338 DSGSPALTGTGTIHVIVDDVNDNVPTFASKMYFTTIPEDAPTGTDVLLV--NASDADASA 2395
Query: 132 QNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ Y + + F ++ +TG I T+ LD E + Y
Sbjct: 2396 NAVISYRIIGGNSQFTINPSTGQIITSALLDRETKDNY 2433
Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
G ++ VNI V D+ND +P F Q++ V Q G ++ + A D DEG N +V Y
Sbjct: 871 GTVTGDTVVNITVKDLNDNSPHFLQAVESVNVVENWQAGHSIFQAKAVDPDEGVNGMVLY 930
Query: 139 SV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
S+ P+++ F ++ G+I LD +E
Sbjct: 931 SLKQNPKNL-FAINEKNGNISLLGPLDVHAGSYQIE 965
Score = 42.7 bits (99), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LSS+ +V + VTD+ND P FQ PY +P G V V TDAD G N+ + YS+
Sbjct: 2448 LSSSTSVFVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSFVFAVTVTDADIGANSELQYSL 2507
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 25/173 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT--------------------DAASYFNLDP 68
LG T++ TD D G + Y + ++ ++ S++NL
Sbjct: 1959 LGSTVLVFNVTDADDGINSQLAYSIASGDSLGQFTIDKDGVLKVLKALDRESQSFYNL-V 2017
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
H P +STA V+I + D+ND P F S P +PE V + ATD
Sbjct: 2018 VQVHDLPQLAASRFTSTAQVSIILLDVNDNPPAFLS-PKLTYIPENTPIDTVVFKAQATD 2076
Query: 128 ADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
D G N+ + Y++ P F + G++R LD E+ Y V K
Sbjct: 2077 PDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATDK 2129
Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N V Y + +
Sbjct: 1515 VTILVTDLNDNVPMFISQNALAADPSAVIGSVLTTIMAADPDEGVNGEVEYEIINGDTDT 1574
Query: 146 FVVDANTGDIRTNKAL 161
F+VD +GD+R AL
Sbjct: 1575 FIVDRYSGDLRVASAL 1590
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG + Y + N F++ P T E Q
Sbjct: 1329 RIGELVSSVTATDSDSGDNADLHYSITGTNNHGT--FSISPNTGSIFLAKKLDFETQSLY 1386
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G SST +V I V D ND P F S+ E G +V V A D
Sbjct: 1387 KLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVTAHD 1446
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + Y++ + +P F +D G I TN +D E L+
Sbjct: 1447 PDADINGQLSYTIIQQMPRGNHFGIDEIKGTIYTNAEIDREFANLF 1492
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 67/174 (38%), Gaps = 20/174 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G V+Y + + ++ LD
Sbjct: 694 YFAHIQENEPGGSYITTVSATDPDLGPNGTVKYSISAGDRSRFQVNAQSGVISTRMALDR 753
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V I V D D P F Y F V E G VG
Sbjct: 754 EEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAYSFVVFENVALGYQVG 813
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A+ D N + Y D F ++ TG + T +D E+Q Y +V
Sbjct: 814 SVSASTMDLNSN-ISYLITTGDQKGMFTINQVTGQLSTASVIDREEQSFYQLKV 866
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNAVVYYSV 140
SS A++ I V DIND P F Y ++ E G V V ATD D G NA + YS+
Sbjct: 456 SSVASLVIFVNDINDHPPVFAQQVYRVNLSEEAPPGSYVCGVSATDGDSGLNANLRYSI 514
>gi|440896003|gb|ELR48045.1| Protocadherin-16 [Bos grunniens mutus]
Length = 3188
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 82/162 (50%), Gaps = 28/162 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGP- 75
G +++V A D D G G V Y L +F++DP + E Q
Sbjct: 487 GSFVVRVTARDPDQGTNGQVTYSLAPGAH--TRWFSIDPTSGIVTTAALLDYELEPQPQL 544
Query: 76 --IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ +GGL SS+ATV++ + D+ND P+FQ Y S+PEG Q G +V ATDAD
Sbjct: 545 IVVATDGGLPPLSSSATVSVVLQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDAD 604
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEK 165
G ++ YS+ + PF +DA++GD+ T + LD ++
Sbjct: 605 SGPFGLLSYSLGAGLGTSGSPPFRIDAHSGDVCTTRTLDRDQ 646
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 22/161 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT--DAASYFNLDPAT--- 70
SL ++A ++ G + + A D D+G FG + Y LL+ + F L+ +T
Sbjct: 2599 SLLSTSLAENQPP-GTLVTTLHAIDGDAGAFGRLHYSLLEAGPGPEGREAFALNSSTGEL 2657
Query: 71 --------EHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
EH G Q D G LS++ TV++ VT ++ +P F + + F VPEG +
Sbjct: 2658 RARVAFDYEHTGSFQLLVGATDAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQVPEGAR 2717
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDI 155
G ++G V ATD D G + +V YS+ P F ++ TG +
Sbjct: 2718 RGHSLGHVQATDEDGGADGLVLYSLAASSPYFGINQTTGAL 2758
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 30/178 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + R+ G +L+ ++ATD D G G V Y + F+LDP T
Sbjct: 1544 YSVLLRENSPPGTSLLTLQATDPDLGANGQVTYGGISGEN-----FSLDPDTGVLTTLRA 1598
Query: 71 ---EHQGPIQ-----DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
E Q I +GG L + TV + V D ND P F S VPEGQD
Sbjct: 1599 LDREEQEEINLTVYARDGGSPPLLTHVTVRVAVEDENDHAPAFGSAHLSLEVPEGQDPQT 1658
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQ---QLYLE 171
+ + A+D D G N + Y + + P FV+D +G+ T + LD E + QL +E
Sbjct: 1659 LTTLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQLQIE 1716
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 73/162 (45%), Gaps = 28/162 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQ 73
+G L+ V+A+D D G GLV + L ++ D F LD ++ HQ
Sbjct: 2507 VGAELLHVEASDADPGPHGLVRFTL--SSGDPLGLFELDESSGDLRLARPLDCETQARHQ 2564
Query: 74 GPIQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
+Q G + A V I V D+ND P F S+ E Q G V +HA D D
Sbjct: 2565 LVVQAADPAGAHFALAPVTIEVQDVNDHGPAFPLSLLSTSLAENQPPGTLVTTLHAIDGD 2624
Query: 130 EGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYE 164
G ++YS+ E P F ++++TG++R A DYE
Sbjct: 2625 AGAFGRLHYSLLEAGPGPEGREAFALNSSTGELRARVAFDYE 2666
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 20/158 (12%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL---------------DPATEHQGPI 76
TL ++A+D D G G ++YR+LD + A +L +PA + Q
Sbjct: 1658 TLTTLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQLQIEA 1717
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQN 133
+D G LS+T V + V D ND P F Y VPE G + ++ A D D G N
Sbjct: 1718 RDGGQPALSATLLVTVTVLDANDHAPAFPVPSYSVEVPEDAPAGTLLLQLQAHDPDAGAN 1777
Query: 134 AVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
V Y + F+++ ++G++RT LD E+ Y
Sbjct: 1778 GRVTYYLGTGAAGAFLLEPSSGELRTATTLDREQCPSY 1815
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 63/143 (44%), Gaps = 20/143 (13%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-NTDAASYFNLDPAT------ 70
FY A + + G +QV ATD DSG FGL+ Y L T + F +D +
Sbjct: 580 FYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGTSGSPPFRIDAHSGDVCTT 639
Query: 71 ----EHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDG 117
QGP D GGL S V + V+D ND P+F Y S+ + G
Sbjct: 640 RTLDRDQGPSSFDFTVTAVDGGGLKSMVYVKVFVSDENDNPPQFYPREYAASLSAQSAPG 699
Query: 118 LAVGRVHATDADEGQNAVVYYSV 140
AV RV A D D+G + + Y +
Sbjct: 700 TAVLRVRAHDPDQGPHGRLSYHI 722
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A +++ + DIND P F Y +V E G V +V+A+DAD G N V Y +
Sbjct: 237 ALLDVTLLDINDHAPAFNQSRYHAAVSESLSPGSPVLQVYASDADAGANGAVTYEINRRQ 296
Query: 143 ---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D PF +DA+TG +R + LD+E+++++
Sbjct: 297 SEGDGPFSIDAHTGLLRLERPLDFEQRRVH 326
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 68/158 (43%), Gaps = 30/158 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPI--- 76
G L+Q++A D D+G G V Y L T AA F L+P++ Q P
Sbjct: 1761 GTLLLQLQAHDPDAGANGRVTYYL---GTGAAGAFLLEPSSGELRTATTLDREQCPSYAF 1817
Query: 77 -------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-----GQDGLAVGRVH 124
G LS+T V I V D+ND P F + P +P L + +
Sbjct: 1818 TVNAVDSAAAGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGPVFSTPILPLATLR 1877
Query: 125 ATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKA 160
A D D G NA + Y + P VD+ TG+IR +++
Sbjct: 1878 AEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVSRS 1915
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY 138
G ++TATV I + + ND +P P +V E Q G +VGRV ATD D G N + Y
Sbjct: 1081 GQQTATATVRISILNQNDHSPRLSEEPTFLAVAENQPPGTSVGRVFATDRDSGINGRLTY 1140
Query: 139 SVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
S+ + F + TG++ T + LD E+Q Y
Sbjct: 1141 SLRQLSEDSKAFRIHPQTGEVTTLQTLDRERQNSY 1175
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 70/163 (42%), Gaps = 23/163 (14%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------- 77
+ H G T + V A D D G+ V YRL A F L P+T ++
Sbjct: 1446 EDHPPGPTALHVVARDPDLGEAARVSYRL---AAGADGCFRLHPSTGALSVVRSLDREQR 1502
Query: 78 ----------DEGGLSSTAT--VNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVH 124
D G +AT + + V D+ND+ P FQ Y + E G ++ +
Sbjct: 1503 AEYVLTVVASDHGSPPRSATQLLTVSVADVNDEAPAFQQQEYSVLLRENSPPGTSLLTLQ 1562
Query: 125 ATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQ 167
ATD D G N V Y F +D +TG + T +ALD E+Q+
Sbjct: 1563 ATDPDLGANGQVTYGGISGENFSLDPDTGVLTTLRALDREEQE 1605
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
SS V + V D+ND P F Y +VPE G + V A+DAD G + +V +++
Sbjct: 2473 SSAVPVTVSVLDVNDNPPVFTRAAYRVAVPEDTPVGAELLHVEASDADPGPHGLVRFTLS 2532
Query: 142 EDIP---FVVDANTGDIRTNKALDYEKQQLY 169
P F +D ++GD+R + LD E Q +
Sbjct: 2533 SGDPLGLFELDESSGDLRLARPLDCETQARH 2563
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 33/171 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G ++ +V ATD+DSG G + Y L + D+ + F + P T E Q
Sbjct: 1119 GTSVGRVFATDRDSGINGRLTYSLRQLSEDSKA-FRIHPQTGEVTTLQTLDRERQNSYQL 1177
Query: 76 ---IQDEGG--LSSTATVNIRVTDINDKNPEF--------QSLPYEFSVPEG-QDGLAVG 121
+QD G S+T TV+I V D+ND +P F LP + VP+G G V
Sbjct: 1178 LVQVQDAGSPPRSTTGTVHIAVLDLNDNSPTFLQASGAAGGGLPIQ--VPDGVPPGTLVT 1235
Query: 122 RVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ A D DEG+N + Y + P F + ++G++ T L ++ Y+
Sbjct: 1236 TLQAKDPDEGENGTILYMLTGPGSELFSLHPHSGELLTAAPLIRAERPHYV 1286
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 76/179 (42%), Gaps = 32/179 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG---- 74
Y A + G +++V+A D D G G + Y +L N+ F LD EH G
Sbjct: 688 YAASLSAQSAPGTAVLRVRAHDPDQGPHGRLSYHILAGNS--PPLFALD---EHSGLLTV 742
Query: 75 --PI--------------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D GGL + A VNI + P F+ L Y FSVPE
Sbjct: 743 AWPLARRASSMVQLEIGARDGGGLQAEPNARVNISIVPGTPVPPVFEQLQYVFSVPEDVA 802
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
G +VG V A + G+ V ++ P F +D TG ++T + LD E LE
Sbjct: 803 PGTSVGVVQAHNP-PGRLGPVTLALSGGDPRGLFSLDGATGLLQTLRPLDRELLGPVLE 860
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 66/147 (44%), Gaps = 28/147 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------- 68
Y M + G ++ V ATD+DSG G V Y L +A F++DP
Sbjct: 2270 LYQVMLLEHTPPGSAILSVSATDRDSGANGHVSYHL----ASSAEGFSIDPNNGTLFTTV 2325
Query: 69 ---ATEHQGP--------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG- 114
A H+GP +D G ++ ATV++++ D ND P F Y +V E
Sbjct: 2326 GTVALGHEGPGMVDVVLEARDHGVPVRAARATVHVQLQDQNDHAPSFTLPHYRVAVTEDL 2385
Query: 115 QDGLAVGRVHATDADEGQ-NAVVYYSV 140
G + + ATDAD + +A V YS+
Sbjct: 2386 PPGSTLLTLEATDADGSRSHAAVDYSI 2412
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 71/180 (39%), Gaps = 39/180 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + L L+QV+A D D G G + Y L + A F++DP
Sbjct: 2066 YVAFLPESRPLEGPLLQVEADDLDQGPSGQISYSLAASQP-ARGLFHVDPATGTITTTAI 2124
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
AT+ P L +AT+ + V D ND P P+E V E
Sbjct: 2125 LDREIWAETRLVLMATDRGSP-----ALVGSATLTVMVIDTNDNRPTIPQ-PWELRVSED 2178
Query: 114 GQDGLAVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + +V D D G V++Y S P+D PF V G + LD+E++ Y
Sbjct: 2179 ALLGSEIAQVTGNDVDSG--PVLWYVLSPSGPQD-PFSVGRYGGRLSLTGPLDFEQRDRY 2235
Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 70/173 (40%), Gaps = 31/173 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH----------------- 72
G + ++A D DSG V + LL F +DP T H
Sbjct: 908 GTLIYTLRALDPDSGVNSRVTFTLLAGG---GGTFTVDPTTGHIRLMGPLGPPGGPAHEL 964
Query: 73 QGPIQDEGGLSSTATVNIRVT--DINDKN--PEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+ +D G T+ ++RV D+ + P F S Y +P G G V +V A
Sbjct: 965 ELEARDGGSPPRTSHFHLRVVVQDLGTRGLAPHFDSPTYRVDLPSGTTPGTQVVQVQARA 1024
Query: 128 ADEGQNAVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D + V Y + D PF ++ +G + ALD+E Q+LY +V +S
Sbjct: 1025 PD---GSPVTYHLAADGPGSPFGLEPQSGWLWVRAALDHEAQELYTLKVMAVS 1074
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 44/93 (47%), Gaps = 15/93 (16%)
Query: 82 LSSTATVNIRVTDINDKNPEF-------QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
L + A + VTD+ND P F + LP E ++P G V RV A D D+G N
Sbjct: 450 LRAEAAFVLHVTDVNDNAPAFDRQLYRPEPLP-EVALP----GSFVVRVTARDPDQGTNG 504
Query: 135 VVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
V YS+ F +D +G + T LDYE
Sbjct: 505 QVTYSLAPGAHTRWFSIDPTSGIVTTAALLDYE 537
>gi|395845725|ref|XP_003795575.1| PREDICTED: protocadherin Fat 4 isoform 2 [Otolemur garnettii]
Length = 4981
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 82/170 (48%), Gaps = 22/170 (12%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL+ Y + N + A + +
Sbjct: 3096 ATIPESHSIGAIVRTVSARDRDTAMNGLIRYSISSGNEEGIFALNSSTGILTLAKALDYE 3155
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
+H+ I D G ++ T +V + V D+ND +P F S Y +V E G V
Sbjct: 3156 LCQKHEMMISAVDGGWVARTGYCSVTVNVIDVNDNSPVFLSDEYFPTVLENAPSGTTVIH 3215
Query: 123 VHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y+V D+ FV+D NTG I T LD+E +Q Y
Sbjct: 3216 LNATDADSGTNAVIAYTVQSSDSDL-FVIDPNTGVITTQGFLDFETKQSY 3264
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F +DP + E +
Sbjct: 1756 GSKIMQLTAMDADEGANALVTYTIISGADDS---FRIDPESGDLIATKRLDRERRSKYSL 1812
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQ 132
D+G SS +NI V+D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1813 LVRADDGLQSSDVRINITVSDVNDHTPKFSRPVYSFDIPEDTIPGSLVAAILATDDDSGV 1872
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG + LD+E QQ Y+ V
Sbjct: 1873 NGEITYIVNEDDEDGIFFLNPVTGVFNLTRVLDFEAQQYYILTV 1916
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 77/175 (44%), Gaps = 25/175 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
FY A + +++V A+D D G GL+ Y ++ N + F++D ++ I
Sbjct: 1214 FYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEERQ--FSIDSSSGQVALIG 1271
Query: 78 -----------------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
D G L+ST T+NI + D ND P F V E + G
Sbjct: 1272 KLDYETTPAYSLIIQAVDSGTISLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIG 1331
Query: 118 LAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD+D G NA ++YS+ F + NTG I K LD+E Q LY
Sbjct: 1332 ELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSIFLAKKLDFETQSLY 1386
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 76/167 (45%), Gaps = 33/167 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------------------- 68
G L+ ++ATD+D G G V + L + TD S F LDP
Sbjct: 599 GTELLILRATDRDLGDNGTVGFSLQEAETDQRS-FRLDPVSGRLSTVSSLDREEQAFYSL 657
Query: 69 ---ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVH 124
AT+ P Q SS +N+ + DIND +P F + Y + E + G + + V
Sbjct: 658 LVVATDLGSPPQ-----SSMVRINVSLLDINDNSPVFYPVQYFAHIQENEPGGSYITTVS 712
Query: 125 ATDADEGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ATD D G N V YS+ + F V+A +G I T ALD E++ Y
Sbjct: 713 ATDPDLGPNGTVKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAY 759
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 22/168 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + +Y ++D + F ++P+T
Sbjct: 2774 SQIFSAHVPENSPLGYTVTRVTTSDEDIGMNAISKYSIMDTSLP----FTINPSTGDIVI 2829
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V I VTD+ND P F Y PE + G
Sbjct: 2830 SRPLNREDTDRFRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPELTEIGS 2889
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
V +V ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 2890 RVTQVSATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQILKYQN 2937
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 71/161 (44%), Gaps = 20/161 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +ATD DSG +EY LL+ + S +D G + D
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATD 2128
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y+ + E G + +V A D DEG N
Sbjct: 2129 KGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQ 2188
Query: 136 VYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V Y + + F +D+ TG I K LD EK YL V
Sbjct: 2189 VRYGIVGGNANQEFRIDSVTGAITVAKPLDREKTPTYLLTV 2229
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 38 ATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGGLSSTAT--- 87
ATD D G G+ YR++ N A F LD G + +GGL T
Sbjct: 159 ATDSDIGSNGVDHRSYRIIQGN--EAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQY 216
Query: 88 -------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
VN+ V DIND P F S Y+ VPE G +V +V A D
Sbjct: 217 QLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAAD 276
Query: 128 ADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ADEG NA + Y + E PF +D TG I + LD+E ++ Y
Sbjct: 277 ADEGTNADIRYRLQDEGTPFQMDPETGLITVREPLDFEARRQY 319
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 24/162 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V A DKDSG G ++Y ++ N + + F+++ AT I+
Sbjct: 2687 ILTVSAMDKDSGPNGQLDYEIVKGNEENS--FSINHATGEIRSIRPLDREKVSQYMLTVK 2744
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G S + ++ I + D ND P F + + VPE G V RV +D D G
Sbjct: 2745 SSDKGSPSQSTSIKVIINILDENDNAPRFSQI-FSAHVPENSPLGYTVTRVTTSDEDIGM 2803
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA+ YS+ + +PF ++ +TGDI ++ L+ E + RV
Sbjct: 2804 NAISKYSIMDTSLPFTINPSTGDIVISRPLNREDTDRFRIRV 2845
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 81/188 (43%), Gaps = 23/188 (12%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF---NLDPAT 70
D L Y + + +V+A+DKDSG G + Y + + NT DA F L +
Sbjct: 997 DQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGNTGDAFGIFPDGQLYIKS 1056
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E +QD LS+T V + + D+ND P F S Y F E Q G
Sbjct: 1057 ELDRELQDRYVLLVVAFDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQKAG 1116
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLER---V 173
VG+V A D D G N V Y+ P F + A +G+I D ++ L +R V
Sbjct: 1117 SFVGKVSAVDKDFGPNGEVRYAFEMVQPDFELHAISGEITNTHQFD--RESLMRQRGTAV 1174
Query: 174 FLISKFAT 181
F + AT
Sbjct: 1175 FSFTVIAT 1182
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 78/162 (48%), Gaps = 22/162 (13%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQGPI 76
++G L++V A D KD G VEY + LDN+T S + + +Q +
Sbjct: 2997 KVGTKLIKVTAVDDKDFGLNSEVEYFISNENHLGKFKLDNDTGWISVASSLISDLNQNFL 3056
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D+G LSS ATV I VT+ N PEF ++PE G V V A D
Sbjct: 3057 ITVTAKDKGNPPLSSQATVQITVTEENYHTPEFSQSHMSATIPESHSIGAIVRTVSARDR 3116
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQ 167
D N ++ YS+ E+ F ++++TG + KALDYE Q
Sbjct: 3117 DTAMNGLIRYSISSGNEEGIFALNSSTGILTLAKALDYELCQ 3158
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L ATV++ + DIND P F Y+ ++ E L V RV A+D DEG N +++YS+
Sbjct: 1190 LKDQATVHVYMKDINDNAPRFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSI 1249
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E+ F +D+++G + LDYE Y
Sbjct: 1250 IKGNEERQFSIDSSSGQVALIGKLDYETTPAY 1281
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 80/168 (47%), Gaps = 27/168 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGPI--- 76
G ++QV A D D G G V Y ++ N A F +D P + P
Sbjct: 2170 GTDIIQVFAADGDEGTNGQVRYGIVGGN--ANQEFRIDSVTGAITVAKPLDREKTPTYLL 2227
Query: 77 ----QDEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDA 128
D G + T+TV+I + DIND P F+ PY +VPE + L + +V A D
Sbjct: 2228 TVQATDRGSTPRTDTSTVSIVLLDINDFVPIFELSPYAVNVPENLETLPRTILQVVARDD 2287
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
D+G N+ + Y + ED F + A +G++R ++LD E ++ ++ V
Sbjct: 2288 DQGSNSKISYVLFGGNEDNAFTLSA-SGELRVIQSLDRESKEQFVLTV 2334
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 73/180 (40%), Gaps = 35/180 (19%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPATEHQGPIQ 77
+ + G ++ Q KA D D G G+V Y L N N + L P H G Q
Sbjct: 904 ENWQAGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINEKNGNISLLGPLDVHAGSYQ 963
Query: 78 DE--------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
E LSS+ + + V D+ND +P F L YE ++ E + +V A+D
Sbjct: 964 IEILASDMGVPQLSSSLILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDK 1023
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYLERVFLISKF 179
D G N + Y++ E NTGD + LD E Q Y V L+ F
Sbjct: 1024 DSGANGEIAYTIAE-------GNTGDAFGIFPDGQLYIKSELDRELQDRY---VLLVVAF 1073
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 75/172 (43%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3210 GTTVIHLNATDADSGTNAVIAYTVQSSDSD---LFVIDPNT---GVITTQGFLDFETKQS 3263
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S TVNI++ N+ P F S Y F + E G VG V A+
Sbjct: 3264 YHLTVKAFNVPDEERCSFTTVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFAS 3323
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F ++ TG I + LD EK+ ERV L
Sbjct: 3324 DRDLGIDGEVHYLIFGNSRKKGFQINKKTGQIYVSGILDREKE----ERVSL 3371
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1724 AEVEITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTYTIISGA 1783
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ K LD E++ Y
Sbjct: 1784 DDSFRIDPESGDLIATKRLDRERRSKY 1810
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV- 140
SS ++I V D+ND P F+ P+ + E + V A D D G N + Y +
Sbjct: 2649 FSSYEKLDITVLDVNDNVPIFKEDPFVSEILENLSPRKILTVSAMDKDSGPNGQLDYEIV 2708
Query: 141 --PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
E+ F ++ TG+IR+ + LD EK Y+ V
Sbjct: 2709 KGNEENSFSINHATGEIRSIRPLDREKVSQYMLTV 2743
Score = 43.1 bits (100), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
G ++ VNI V D+ND +P F Q++ V Q G ++ + A D DEG N +V Y
Sbjct: 871 GTVTGDTVVNITVKDLNDNSPHFLQAVESVNVVENWQAGHSIFQAKAVDPDEGVNGMVLY 930
Query: 139 SV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
S+ P+++ F ++ G+I LD +E
Sbjct: 931 SLKQNPKNL-FAINEKNGNISLLGPLDVHAGSYQIE 965
Score = 42.7 bits (99), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LSS+ +V + VTD+ND P FQ PY +P G V V TDAD G N+ + YS+
Sbjct: 2446 LSSSTSVFVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSFVFAVTVTDADIGANSELQYSL 2505
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 66/158 (41%), Gaps = 24/158 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPIQ---- 77
T++QV A D D G + Y L N D A + LD ++ Q +
Sbjct: 2278 TILQVVARDDDQGSNSKISYVLFGGNEDNAFTLSASGELRVIQSLDRESKEQFVLTVTAT 2337
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE----GQDGLAVGRVHATDADEG 131
D G L+ T T+++ V D+ND P F S Y ++PE G D L V +
Sbjct: 2338 DSGSPALTGTGTIHVIVDDVNDNVPTFASKMYFTTIPEDAPTGTDVLLV----NASDADA 2393
Query: 132 QNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V + + F ++ +TG I T+ LD E + Y
Sbjct: 2394 SANAVIRIIGGNSQFTINPSTGQIITSALLDRETKDNY 2431
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 25/173 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT--------------------DAASYFNLDP 68
LG T++ TD D G + Y + ++ ++ S++NL
Sbjct: 1959 LGSTVLVFNVTDADDGINSQLAYSIASGDSLGQFTIDKDGVLKVLKALDRESQSFYNL-V 2017
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
H P +STA V+I + D+ND P F S P +PE V + ATD
Sbjct: 2018 VQVHDLPQLAASRFTSTAQVSIILLDVNDNPPAFLS-PKLTYIPENTPIDTVVFKAQATD 2076
Query: 128 ADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
D G N+ + Y++ P F + G++R LD E+ Y V K
Sbjct: 2077 PDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATDK 2129
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N V Y + +
Sbjct: 1515 VTILVTDLNDNVPMFISQNALAADPSAVIGSVLTTIMAADPDEGVNGEVEYEIINGDTDT 1574
Query: 146 FVVDANTGDIRTNKAL 161
F+VD +GD+R AL
Sbjct: 1575 FIVDRYSGDLRVASAL 1590
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG + Y + N F++ P T E Q
Sbjct: 1329 RIGELVSSVTATDSDSGDNADLHYSITGTNNHGT--FSISPNTGSIFLAKKLDFETQSLY 1386
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G SST +V I V D ND P F S+ E G +V V A D
Sbjct: 1387 KLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVTAHD 1446
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + Y++ + +P F +D G I TN +D E L+
Sbjct: 1447 PDADINGQLSYTIIQQMPRGNHFGIDEIKGTIYTNAEIDREFANLF 1492
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 67/174 (38%), Gaps = 20/174 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G V+Y + + ++ LD
Sbjct: 694 YFAHIQENEPGGSYITTVSATDPDLGPNGTVKYSISAGDRSRFQVNAQSGVISTRMALDR 753
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V I V D D P F Y F V E G VG
Sbjct: 754 EEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAYSFVVFENVALGYQVG 813
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A+ D N + Y D F ++ TG + T +D E+Q Y +V
Sbjct: 814 SVSASTMDLNSN-ISYLITTGDQKGMFTINQVTGQLSTASVIDREEQSFYQLKV 866
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNAVVYYSV 140
SS A++ I V DIND P F Y ++ E G V V ATD D G NA + YS+
Sbjct: 456 SSVASLVIFVNDINDHPPVFAQQVYRVNLSEEAPPGSYVCGVSATDGDSGLNANLRYSI 514
>gi|348537988|ref|XP_003456474.1| PREDICTED: neural-cadherin-like [Oreochromis niloticus]
Length = 2929
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 84/189 (44%), Gaps = 37/189 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-- 76
Y A + ++G ++ QV ATD DSG G++ Y +L + + + +F++D H G I
Sbjct: 1080 YEATVPEGAQMGTSVAQVSATDLDSGLHGMIHYVILKDESGDSQFFSID---SHSGIIFT 1136
Query: 77 ----------------QDEGGLSS------------TATVNIRVTDINDKNPEFQSLPYE 108
Q + G S TA V I VTD+ND P F YE
Sbjct: 1137 RASFDREQKASYLIEVQSQDGSESARQGQQGQPNTDTAYVRIFVTDVNDNAPAFAQPVYE 1196
Query: 109 FSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYE 164
SV E ++ G + V A D DEG NA + Y + F V+ G I + LDYE
Sbjct: 1197 VSVEEDKEVGFVLITVTANDEDEGANAKLRYQITSGNTMGTFDVEPEVGTIFVAQPLDYE 1256
Query: 165 KQQLYLERV 173
+Q Y R+
Sbjct: 1257 MEQRYELRL 1265
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 58/98 (59%), Gaps = 6/98 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV 140
L+S TV + VTD+ND P F S YE +VPEG Q G +V +V ATD D G + +++Y +
Sbjct: 1055 LASFTTVYVNVTDVNDNVPFFLSSTYEATVPEGAQMGTSVAQVSATDLDSGLHGMIHYVI 1114
Query: 141 PEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERV 173
+D F +D+++G I T + D E++ YL V
Sbjct: 1115 LKDESGDSQFFSIDSHSGIIFTRASFDREQKASYLIEV 1152
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 23/154 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------ATEHQGPIQDEGGL 82
G +++V+A D D G G V+Y ++ N AS F++DP A Q E L
Sbjct: 773 GTFVLRVQAHDADMGVNGEVKYGIM-NRDGVASGFDIDPDTGVITTAVSFDRERQREYTL 831
Query: 83 SSTAT------------VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
S TAT + ++++D ND +P+F++ Y++ + E G + R A D D
Sbjct: 832 SVTATDQAEEPLIGICQITVQISDQNDNDPKFENSRYQYFLREDTPVGTSFLRAAAHDDD 891
Query: 130 EGQNAVVYYSVPEDIP--FVVDANTGDIRTNKAL 161
+G NA + YS+ P ++ +TG I N +
Sbjct: 892 QGSNAAITYSLSRQKPAYLHINPSTGWIYVNHPI 925
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 93/206 (45%), Gaps = 46/206 (22%)
Query: 3 PCPIPSALEMTSDSLFYGAMARDKHELGVTLMQVKATDKD---SGKFGLVEYRLLDN--N 57
PCP ALE+ D F G + + ++M+++A D D G+ L+ Y ++ N N
Sbjct: 1400 PCP---ALEV--DGCFVGQVPENS-PADTSVMEMRAMDLDDPNEGRNALLTYSIIKNIRN 1453
Query: 58 TDAASYFNLDPATEHQGPI---------------------QDEGGLSSTATVNIRVTDIN 96
+ F+++ T G I +D GGL+ T T I V+D+N
Sbjct: 1454 EINLNLFSINATT---GTIYTVLRSLDREMEDRYLVVVEARDGGGLAGTGTATIMVSDVN 1510
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANT 152
D P F Y V E + V V ATD DEG+NAVV +S+ ED F V+ +
Sbjct: 1511 DHPPIFTQRLYNTQVTEDLEVNSEVLVVSATDGDEGENAVVTFSIVGGDEDRKFFVETDK 1570
Query: 153 ----GDIRTNKALDYEKQQLYLERVF 174
G I+ K +D+EK ER F
Sbjct: 1571 VNRRGVIKLKKKVDFEKPN---ERTF 1593
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 82 LSSTATVNIRVTDINDKNP---EFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVY 137
LSS+A V + + DIN+ P E Q+ +V E Q G V RV A DAD G N V
Sbjct: 734 LSSSAQVIVGINDINNNKPLFKECQNYSLNAAVLENQPPGTFVLRVQAHDADMGVNGEVK 793
Query: 138 YSVPED----IPFVVDANTGDIRTNKALDYEKQQLY 169
Y + F +D +TG I T + D E+Q+ Y
Sbjct: 794 YGIMNRDGVASGFDIDPDTGVITTAVSFDRERQREY 829
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 85/199 (42%), Gaps = 48/199 (24%)
Query: 14 SDSLFYGAMARDKHELGVTLMQVKATDKD-----------------SGKFGLVEY----- 51
S + ++ A+ + +L V +++V ATD D G+F + E
Sbjct: 1293 SQTEYHAAVMEELTQLPVFILEVSATDPDQEADQSALRYSLHGQGAGGEFTIDERTGRIY 1352
Query: 52 --RLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF 109
R LD A F L AT+ G GL+ A V + V DIND P F E
Sbjct: 1353 AQRRLDREERPAWRF-LVLATDEGG-----AGLTGFADVLLEVRDINDNAPFFPCPALEV 1406
Query: 110 ------SVPEGQDG-LAVGRVHATDAD---EGQNAVVYYSVPEDIP-------FVVDANT 152
VPE +V + A D D EG+NA++ YS+ ++I F ++A T
Sbjct: 1407 DGCFVGQVPENSPADTSVMEMRAMDLDDPNEGRNALLTYSIIKNIRNEINLNLFSINATT 1466
Query: 153 GDIRTN-KALDYEKQQLYL 170
G I T ++LD E + YL
Sbjct: 1467 GTIYTVLRSLDREMEDRYL 1485
Score = 42.7 bits (99), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 81 GLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYY 138
GLSS A V + +TD ND PEF S+ ++PE G ++ +V A D D G N+ + Y
Sbjct: 524 GLSSVAEVVVHITDENDCTPEFLHSIYTRDNIPESIAPGTSLLQVLARDCDSGINSEISY 583
Query: 139 SVPEDIPFVVDANTGDIRTNKALDYEK 165
VP F + + G + + LDYE+
Sbjct: 584 FVPSS-DFSITSG-GVVSPARRLDYER 608
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 82/194 (42%), Gaps = 46/194 (23%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA----------- 69
AM+ D +G + QV A+D DSG+ G Y + +D + F +D +
Sbjct: 1633 AMSEDV-PVGTIVAQVTASDLDSGQNGRFSYSI-SKESDPYNQFLVDQSGWVVVADSLDR 1690
Query: 70 ---TEHQGPI--QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR 122
++H+ I D G L+ TA V + V D+ND PEF+ +PY+ V E R
Sbjct: 1691 EKISQHRIMILATDAGSPPLTGTAIVVVTVLDVNDNGPEFE-VPYKPVVWENTAAPQPVR 1749
Query: 123 -------VHATDADEGQNAVVYYSVPEDIPFVV------DANTGDIRTN-------KALD 162
+HATD D N S P I ++ + N D R +A D
Sbjct: 1750 MNETSLLLHATDRDTSTN-----SGPFSIRLLMLTSDATNFNLTDFRNGSAAITALRAFD 1804
Query: 163 YEKQQLYLERVFLI 176
E+Q+ Y + +I
Sbjct: 1805 RERQKEYRLPILMI 1818
Score = 39.3 bits (90), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 71/171 (41%), Gaps = 20/171 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT--------DAASYF---NLD 67
Y + E+G L+ V A D+D G + Y++ NT + + F LD
Sbjct: 1195 YEVSVEEDKEVGFVLITVTANDEDEGANAKLRYQITSGNTMGTFDVEPEVGTIFVAQPLD 1254
Query: 68 PATEHQGPIQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVG--R 122
E + ++ +G + V ++V + ND+ P F Y +V E L V
Sbjct: 1255 YEMEQRYELRLVASDGKWENETLVVVQVVNRNDEAPVFSQTEYHAAVMEELTQLPVFILE 1314
Query: 123 VHATDAD-EGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
V ATD D E + + YS+ F +D TG I + LD E++ +
Sbjct: 1315 VSATDPDQEADQSALRYSLHGQGAGGEFTIDERTGRIYAQRRLDREERPAW 1365
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 79/194 (40%), Gaps = 35/194 (18%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
Y + E+ ++ V ATD D G+ +V + ++ + D + D +G I+
Sbjct: 1520 LYNTQVTEDLEVNSEVLVVSATDGDEGENAVVTFSIVGGDEDRKFFVETD-KVNRRGVIK 1578
Query: 78 ---------------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
++ S A I+V D ND P F P + P +
Sbjct: 1579 LKKKVDFEKPNERTFNLTLKAEDADFFSLAYCLIQVEDSNDHAPVF--FPQFYESPAMSE 1636
Query: 117 GLAVG----RVHATDADEGQNAVVYYSVPEDI----PFVVDANTGDIRTNKALDYEKQQL 168
+ VG +V A+D D GQN YS+ ++ F+VD +G + +LD EK +
Sbjct: 1637 DVPVGTIVAQVTASDLDSGQNGRFSYSISKESDPYNQFLVD-QSGWVVVADSLDREK--I 1693
Query: 169 YLERVFLISKFATS 182
R+ +++ A S
Sbjct: 1694 SQHRIMILATDAGS 1707
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 16/146 (10%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT--EHQGP--------IQDE 79
G +L+QV A D DSG + Y + ++ S + PA +++ P + +
Sbjct: 562 GTSLLQVLARDCDSGINSEISYFVPSSDFSITSGGVVSPARRLDYERPNHIYEFLVVAVD 621
Query: 80 GGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPE--GQDGLAVGRVHATDADEGQNA 134
G + TA++ IRV + ND+ P F Y+ + E G D L V VHA D D +
Sbjct: 622 AGTPPRTGTASIRIRVANTNDEAPVFSQNVYKTFLSEDAGPDTL-VAIVHANDPDGDGVS 680
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKA 160
ED F++D G I+ ++
Sbjct: 681 YAITGGNEDSNFLLDNQKGIIKLRRS 706
>gi|344257579|gb|EGW13683.1| Protocadherin-16 [Cricetulus griseus]
Length = 3015
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 28/162 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGPI 76
G +++V A D D G G V Y L +F++DP + E Q +
Sbjct: 485 GSFVVRVTAQDPDQGTNGQVTYSLAPGTH--THWFSIDPTSGIITTAATLDYELEPQPQL 542
Query: 77 ---QDEGGLS---STATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+GGL S+ATV++ + D+ND P+FQ Y S+PEG Q G +V ATDAD
Sbjct: 543 IVLATDGGLPPLVSSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDAD 602
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEK 165
G ++ YS+ I PF +DA++GD+ T + LD ++
Sbjct: 603 SGSFGLLSYSLGAGIGASGSPPFRIDAHSGDVCTTRTLDRDQ 644
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 75/147 (51%), Gaps = 21/147 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDN--NTDAASYFNLDPAT-----------EHQGPI 76
G + + A D D+G FG ++Y LL+ + F+L+ +T EH G
Sbjct: 2439 GTLVTTLHAIDGDAGTFGRLQYSLLEAMPGPEGREAFSLNSSTGELRARVPFDYEHTGSF 2498
Query: 77 Q------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ D G LS++ TV++ VT ++ +P F + + F VPEG Q G ++G V ATD D
Sbjct: 2499 RLLVGAADAGNLSASVTVSVLVTGEDEYDPVFLAPTFHFQVPEGAQRGHSLGHVQATDED 2558
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDI 155
G + +V YS+ P F ++ TG +
Sbjct: 2559 GGADGLVLYSLATSSPYFGINQTTGAL 2585
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 74/162 (45%), Gaps = 29/162 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY--------------RLLDNNTDAASY 63
FY A + + G +QV ATD DSG FGL+ Y R+ ++ D +
Sbjct: 578 FYNASLPEGTQPGTCFLQVTATDADSGSFGLLSYSLGAGIGASGSPPFRIDAHSGDVCTT 637
Query: 64 FNLDPATEHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEG 114
LD QGP D GGL S V + V D ND P+F Y S+ +
Sbjct: 638 RTLD---RDQGPSSFDFTVTAIDGGGLKSIVYVKVFVADENDNPPQFYPREYAASLSAQS 694
Query: 115 QDGLAVGRVHATDADEGQNA-VVYYSVPEDIP--FVVDANTG 153
G AV RVHA D D+G + + Y+ + + P F +DA++G
Sbjct: 695 TPGTAVLRVHAHDPDQGPHGQLSYHILAGNSPPLFALDAHSG 736
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 27/173 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + R+ G +L+ +KATD D G G V Y + + F+LDP T
Sbjct: 1371 YSVLLRENSPPGTSLLTLKATDPDLGANGQVTYGGVSGES-----FSLDPNTGVLTTLRA 1425
Query: 71 ---EHQGPI------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
E Q I +D G L + A V + V D ND P F + VPEGQD
Sbjct: 1426 LDREEQEEINLTVYARDRGSPPLLTHAIVRVTVEDENDHTPTFGNTHLSLEVPEGQDPQT 1485
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ + A+D D+G N + Y + + P F +D +G+ T + LD E + +
Sbjct: 1486 LTILRASDPDKGLNGQLQYRILDGDPSGAFTLDLTSGEFGTMRPLDREVEPAF 1538
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 73/158 (46%), Gaps = 20/158 (12%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL---------------DPATEHQGPI 76
TL ++A+D D G G ++YR+LD + A +L +PA + Q
Sbjct: 1485 TLTILRASDPDKGLNGQLQYRILDGDPSGAFTLDLTSGEFGTMRPLDREVEPAFKLQIEA 1544
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQN 133
+D G LS+T V + V D ND P F Y VPE G + ++ A D D+G N
Sbjct: 1545 RDGGQPALSATLLVTVTVLDANDHAPAFPVPAYSVEVPEDAPSGTLLLQLQAHDPDDGDN 1604
Query: 134 AVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
V Y + F+++ +G++RT ALD E Y
Sbjct: 1605 GRVMYYLGAGTAGAFLLEPTSGELRTATALDREHCASY 1642
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 72/160 (45%), Gaps = 24/160 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDA---ASYFNLDPATEHQGP 75
+G L+ V+A+D D G GLV + L LD N+ A A + + HQ
Sbjct: 2334 VGAELLHVEASDADPGPHGLVRFTLSSGDPLGLFELDENSGALRLAHPLDCETQARHQLV 2393
Query: 76 IQ--DEGGLS-STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEG 131
+Q D G + V + V D+ND P F S+ E Q G V +HA D D G
Sbjct: 2394 VQAADPAGTHFALVPVTVEVLDVNDHGPAFPLNLLSTSLAENQPPGTLVTTLHAIDGDAG 2453
Query: 132 QNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYE 164
+ YS+ E +P F ++++TG++R DYE
Sbjct: 2454 TFGRLQYSLLEAMPGPEGREAFSLNSSTGELRARVPFDYE 2493
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 80/172 (46%), Gaps = 35/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G ++ +V ATD+DSG G + Y L + D+ + F + P T EHQ
Sbjct: 1117 GTSVGRVFATDRDSGPNGRLTYSLRQLSEDSKA-FRIHPQTGEVTTLQSLDREHQSSFQL 1175
Query: 76 ---IQDEGG--LSSTATVNIRVTDINDKNPEF--------QSLPYEF--SVPEGQDGLAV 120
+QD G S+T TV+I V D+ND +P F LP + VP G V
Sbjct: 1176 LVHVQDSGSPPRSTTGTVHIAVLDLNDNSPTFLQASGAAGGGLPIQVPDRVPPGT---LV 1232
Query: 121 GRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ A D DEG+N + Y++ P F + +TG++ T +L ++ Y+
Sbjct: 1233 TTLQAKDPDEGENGTILYTLTGPGSELFSLHPHTGELHTAASLIRAERPHYV 1284
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY 138
G + TATV + + + ND +P P +V E Q G +VGRV ATD D G N + Y
Sbjct: 1079 GQQTGTATVRVSILNQNDHSPRLSEEPTFLAVAENQPPGTSVGRVFATDRDSGPNGRLTY 1138
Query: 139 SVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
S+ + F + TG++ T ++LD E Q +
Sbjct: 1139 SLRQLSEDSKAFRIHPQTGEVTTLQSLDREHQSSF 1173
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A +++ + DIND P F Y V E G V +V A+DAD G N V Y +
Sbjct: 235 ALLDVTLLDINDHAPAFNQSRYHAVVSESLAPGSPVLQVFASDADAGANGAVTYEINRRQ 294
Query: 143 ---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D PF +D++TG +R + LD+E+++++
Sbjct: 295 SEGDGPFSIDSHTGLLRLERPLDFEQRRVH 324
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 65/158 (41%), Gaps = 30/158 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G L+Q++A D D G G V Y L A F L+P + EH
Sbjct: 1588 GTLLLQLQAHDPDDGDNGRVMYYL---GAGTAGAFLLEPTSGELRTATALDREHCASYAF 1644
Query: 78 --------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-----GQDGLAVGRVH 124
G LS+T + I V D+ND P F + P +P + LA+ +
Sbjct: 1645 SVNAVDGAAAGPLSTTVPITITVRDVNDHAPTFPTSPLRLRLPRSVPSLSRPTLALATLR 1704
Query: 125 ATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKA 160
A D D G NA + Y + P VD+ TG+IR ++
Sbjct: 1705 AEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARS 1742
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
SS V + V D+ND P F Y +VPE G + V A+DAD G + +V +++
Sbjct: 2300 SSAVPVTVTVLDVNDNPPVFTQASYRVTVPEDMPVGAELLHVEASDADPGPHGLVRFTLS 2359
Query: 142 EDIP---FVVDANTGDIRTNKALDYEKQQLY 169
P F +D N+G +R LD E Q +
Sbjct: 2360 SGDPLGLFELDENSGALRLAHPLDCETQARH 2390
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVP 141
SST + + V DIND+ P F Y + E G ++ + ATD D G N V Y
Sbjct: 1347 SSTQLLTVSVVDINDEAPAFPHQEYSVLLRENSPPGTSLLTLKATDPDLGANGQVTYGGV 1406
Query: 142 EDIPFVVDANTGDIRTNKALDYEKQQ 167
F +D NTG + T +ALD E+Q+
Sbjct: 1407 SGESFSLDPNTGVLTTLRALDREEQE 1432
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG---- 74
Y A + G +++V A D D G G + Y +L N+ F LD H G
Sbjct: 686 YAASLSAQSTPGTAVLRVHAHDPDQGPHGQLSYHILAGNS--PPLFALD---AHSGLLTV 740
Query: 75 --PI--------------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ QD GGL + A VNI + P F+ L Y FSVPE
Sbjct: 741 AWPLARRANSVVQLEIGAQDGGGLQAEPIARVNISIVPGTPTPPIFEQLQYVFSVPEDVA 800
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
G +VG V A + G+ V ++ P F +++ +G ++T + LD E LE
Sbjct: 801 PGTSVGIVQAHNP-PGRLGPVALTLSGGDPQGLFSLESPSGLLKTIRPLDRELLGPVLE 858
Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 70/180 (38%), Gaps = 39/180 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + L L+QV+A D D G G + Y L + A F++DP
Sbjct: 1893 YVAFLPESRPLEGPLLQVEADDLDQGSGGQISYSLAASQP-ARGLFHVDPATGTITTTAI 1951
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
AT+ P L +AT+ + V D ND P P+E V E
Sbjct: 1952 LDREIWAETRLVLMATDRGSP-----ALVGSATLTVMVIDTNDNRPTIPQ-PWELRVSED 2005
Query: 114 GQDGLAVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + +V D D G V++Y S P+D PF + G + LD+E+ Y
Sbjct: 2006 ALLGSEIAQVTGNDVDSG--PVLWYVLSPSGPQD-PFSIGRYGGRVSLTGPLDFEQCDHY 2062
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 63/147 (42%), Gaps = 28/147 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------- 68
Y M + G ++ V ATD+DSG G + Y L F++DP
Sbjct: 2097 LYQVMMLEHTPPGSAILSVSATDRDSGANGHISYHL----ASPGEGFSVDPNNGTLFTTV 2152
Query: 69 ---ATEHQGP--------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG- 114
A +GP +D G G + ATV++++ D ND P F Y +V E
Sbjct: 2153 GAVALGQEGPGVVDVVLEARDHGAPGRVARATVHVQLQDQNDYAPSFTLPHYRVAVSEDL 2212
Query: 115 QDGLAVGRVHATDADEGQ-NAVVYYSV 140
G + + ATDAD + +A V YS+
Sbjct: 2213 PPGSTLLTLEATDADGSRTHATVDYSI 2239
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 44/93 (47%), Gaps = 15/93 (16%)
Query: 82 LSSTATVNIRVTDINDKNPEF-------QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
L + A + VTD+ND P F + LP E ++P G V RV A D D+G N
Sbjct: 448 LRAEAAFVLHVTDVNDNAPAFDRQLYRPEPLP-EVALP----GSFVVRVTAQDPDQGTNG 502
Query: 135 VVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
V YS+ F +D +G I T LDYE
Sbjct: 503 QVTYSLAPGTHTHWFSIDPTSGIITTAATLDYE 535
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 66/173 (38%), Gaps = 31/173 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH----------------- 72
G + ++A D DSG V + LL F +DP T H
Sbjct: 906 GTPIYTLRALDPDSGANSQVTFSLLAGGD---GMFTVDPITGHIRLMGPLGPPGGPAYEL 962
Query: 73 QGPIQDEGGLSSTATVNIRVT----DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+ +D G T+ +RV I+ P F S Y +P G + +V A
Sbjct: 963 EVEARDGGSPPRTSHFRLRVVIQDLGIHGLAPRFDSPTYRVDLPSSTTTGTQILQVQAQA 1022
Query: 128 ADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D + V Y + D PF ++ +G + ALD E Q+LY +V +S
Sbjct: 1023 PD---GSPVTYHLAADGASNPFGLEPQSGWLWVRAALDRESQELYTLKVMAVS 1072
>gi|410967896|ref|XP_003990449.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 2 [Felis catus]
Length = 2931
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 84/181 (46%), Gaps = 26/181 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS-YFNLDPAT---EHQG 74
Y R+ E+G ++ V+ATD D+ + YRLL+ + S F +DP + +G
Sbjct: 301 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEVFEIDPRSGVIRTRG 360
Query: 75 PI------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D G S+TA V + V D ND P+F Y V E
Sbjct: 361 PVDREEVESYQLTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYVVQVREDVT 420
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLER 172
G V RV A+D D+G NA+V+YS+ F +DA TG + LDYE + Y R
Sbjct: 421 PGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLR 480
Query: 173 V 173
V
Sbjct: 481 V 481
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LD 67
Y R+ G +++V A+D+D G LV Y ++ N Y + LD
Sbjct: 411 YVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 470
Query: 68 PATEHQGPIQ---DEGG---LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
T + ++ +GG LS+ + V ++V DIND P F S P++ +V E G
Sbjct: 471 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 530
Query: 120 VGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V A DAD G NA + Y V D PF ++ TG I LD E+ Y
Sbjct: 531 VLHVQAIDADAGDNARLEYRLAGVGHDFPFAINNGTGWISVAAELDREEVDFY 583
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------------AASYFNLDPATEHQ-- 73
+G +++ V A D+D+ ++ Y++ NT + LD E Q
Sbjct: 632 VGTSVVTVSAVDRDA--HSVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYV 689
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G TA V + VTD N P FQS Y +V E + G V + ATD D G
Sbjct: 690 LAVTASDGTRQDTAQVVVNVTDANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 749
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + IP F +DA+TG + T LDYE Q Y
Sbjct: 750 ENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSY 788
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 82/180 (45%), Gaps = 31/180 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS--YFNLDPATE----- 71
Y A + G + ++A D D G+ G +EY +D D+ S +F+LDP T
Sbjct: 193 YQATVPENQPAGTPVASLRAIDPDEGEAGRLEY-TMDALFDSRSKHFFSLDPITGAVTTA 251
Query: 72 ------------HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD- 116
+ QD G S+ AT+ I VTD ND +P F+ Y+ S+ E +
Sbjct: 252 EELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLEV 311
Query: 117 GLAVGRVHATDADEGQNAVVYYSV-------PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G V V ATD D NA + Y + P ++ F +D +G IRT +D E+ + Y
Sbjct: 312 GYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEV-FEIDPRSGVIRTRGPVDREEVESY 370
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLDPATEHQGPIQD- 78
+++Q+ ATD+DSG G V Y + + LD Q ++
Sbjct: 840 SVLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYILRAY 899
Query: 79 --EGGLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
+ G+ T V + V D+ND P F+ ++ V E GLAV RV ATD DEG
Sbjct: 900 AVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGT 959
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 960 NAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYEDRPEYI 1000
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSSTA 86
G T++ + ATD+D+G+ + Y + D+ F +D A Q + E +S T
Sbjct: 735 GTTVVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTL 790
Query: 87 TVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
+ R V D+ND P+F Y+ SV E +V ++ ATD D
Sbjct: 791 AITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRD 850
Query: 130 EGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N V+Y+ D F+V++ +G +RT + LD E Y+ R + + K
Sbjct: 851 SGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYILRAYAVDK 903
Score = 42.7 bits (99), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 32/163 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G+ + +V ATD D G + Y++++ N F LD + + D
Sbjct: 943 IGLAVARVTATDPDEGTNAQIMYQIVEGNI--PEVFQLDIFSGELTALVDLDYEDRPEYI 1000
Query: 79 ------EGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRV 123
L S ATV++R+ D ND P + F S P G A+GRV
Sbjct: 1001 LVIQATSAPLVSRATVHVRLLDRNDNPPVLGNFEILFNNYVTNRSSSFPGG----AIGRV 1056
Query: 124 HATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
A D D + + ++ V ++A+TG++R ++ALD +
Sbjct: 1057 PAHDPDISDSLTYSFERGNELSLVLLNASTGELRLSRALDNNR 1099
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 32/136 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASY-------------FN 65
LG ++ V+A D D+G +EYRL ++N T S F
Sbjct: 527 LGYLVLHVQAIDADAGDNARLEYRLAGVGHDFPFAINNGTGWISVAAELDREEVDFYSFG 586
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
++ A +H P+ L+++A+V++ + D+ND NP F Y + E G +V V
Sbjct: 587 VE-ARDHGTPV-----LTASASVSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVS 640
Query: 125 ATDADEGQNAVVYYSV 140
A D D ++V+ Y +
Sbjct: 641 AVDRDA--HSVITYQI 654
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 100 PEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDANT 152
P+FQ Y+ +VPE Q G V + A D DEG+ + Y++ F +D T
Sbjct: 186 PQFQPPSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSKHFFSLDPIT 245
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G + T + LD E + ++ RV
Sbjct: 246 GAVTTAEELDRETKSTHVFRV 266
>gi|402860228|ref|XP_003894536.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Papio anubis]
Length = 4291
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 85/176 (48%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQ--GP 75
Y A R+ +++V ATD+D GLV Y ++ N+ +F +D T E Q P
Sbjct: 725 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRG--HFAIDSLTGEIQVVAP 782
Query: 76 I--------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ QD G ++T +I+V DIND P F S P++ SV E G
Sbjct: 783 LDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSVLENAPLG 842
Query: 118 LAVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+V + A DAD G+NA + YS V D PFV+++ TG + + LD E + Y
Sbjct: 843 HSVIHIQAVDADHGENARLEYSLTGVASDTPFVINSATGWVSVSGPLDRESVEHYF 898
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQG 74
+++Q+ ATD+D+ G V+Y N D F ++P + E
Sbjct: 1154 SVLQISATDRDAHANGRVQY-TFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTA 1212
Query: 75 PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G L + ++ + V D+ND P F + +E V E G V ++ A D DEG
Sbjct: 1213 YAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDEG 1272
Query: 132 QNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE +Q Y+
Sbjct: 1273 PNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYV 1314
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 32/185 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPAT----- 70
Y R+ E G ++Q++ATD D+ + YR + AA+ F +DP +
Sbjct: 613 YRETLRENVEEGYPILQLRATDGDAPLNANLRYRFVGPPAARAAAAAAFEIDPRSGLIST 672
Query: 71 ------EH------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH QG Q+ G S+T V+I V D ND P+F Y V
Sbjct: 673 SGRVDREHMESYELVVEASDQG--QEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVR 730
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E + V RV ATD D+ N +V+Y++ F +D+ TG+I+ LD+E ++
Sbjct: 731 EDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVVAPLDFEAERE 790
Query: 169 YLERV 173
Y R+
Sbjct: 791 YALRI 795
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V+I +TD N P FQS Y SV E + G + + A+D D G+NA + Y + +++P
Sbjct: 1019 VHINITDANTHRPVFQSAHYSVSVNEDRPVGSTIVVISASDDDVGENARITYLLEDNLPQ 1078
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DA++G I LDYE Q Y
Sbjct: 1079 FRIDADSGAITLQAPLDYEDQVTY 1102
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 29/180 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT------- 70
Y + + G +++V A D D+G+ G + Y L N+ + F++DP +
Sbjct: 505 YQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 564
Query: 71 --------EH--QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
H + QD G LS+T V + V D ND +P F+ Y ++ E ++G
Sbjct: 565 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRENVEEG 624
Query: 118 LAVGRVHATDADEGQNAVVYY--------SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ ++ ATD D NA + Y F +D +G I T+ +D E + Y
Sbjct: 625 YPILQLRATDGDAPLNANLRYRFVGPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESY 684
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEH 72
S Y + +G T++ + A+D D G+ + Y L DN F +D A
Sbjct: 1035 SAHYSVSVNEDRPVGSTIVVISASDDDVGENARITYLLEDN----LPQFRIDADSGAITL 1090
Query: 73 QGPIQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQD 116
Q P+ E ++ T + R V D+ND P+F + Y V E
Sbjct: 1091 QAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAP 1150
Query: 117 GL-AVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ++ ATD D N V Y+ D F ++ +G +RT + LD E +Y
Sbjct: 1151 PFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVY 1208
Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 73/177 (41%), Gaps = 30/177 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGPI--------- 76
LG +++ ++A D D G+ +EY L +D F ++ AT GP+
Sbjct: 841 LGHSVIHIQAVDADHGENARLEYSLTGVASDTP--FVINSATGWVSVSGPLDRESVEHYF 898
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDA 128
+D G LS++A+V + V D+ND PEF Y + E G +V V A D
Sbjct: 899 FGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGTSVVSVTAVDR 958
Query: 129 DEGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
D N+ + Y + G + LDY KQ+ Y + V S A
Sbjct: 959 DA--NSAISYQITGGNTRNRFAISTQGGVGLVTLALPLDY-KQERYFKLVLTASDRA 1012
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 99 NPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDAN 151
+P+F Y+ VPE + G AV RV A D D G+ + YS+ + F +D
Sbjct: 497 HPQFPQYNYQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQ 556
Query: 152 TGDIRTNKALDYEKQQLYLERV 173
+G IRT ALD E + + RV
Sbjct: 557 SGLIRTAAALDRESMERHYLRV 578
>gi|390466328|ref|XP_002751246.2| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2
[Callithrix jacchus]
Length = 2871
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 84/181 (46%), Gaps = 26/181 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS-YFNLDPAT---EHQG 74
Y R+ E+G ++ V+ATD D+ + YRLL+ + S F +DP + +G
Sbjct: 244 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEVFEIDPRSGVIRTRG 303
Query: 75 PI------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D G S+TA V + V D ND P+F Y V E
Sbjct: 304 PVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYVVQVREDVT 363
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLER 172
G V RV A+D D+G NA+V+YS+ F +DA TG + LDYE + Y R
Sbjct: 364 PGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLR 423
Query: 173 V 173
V
Sbjct: 424 V 424
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LD 67
Y R+ G +++V A+D+D G LV Y ++ N Y + LD
Sbjct: 354 YVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 413
Query: 68 PATEHQGPIQ---DEGG---LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
T + ++ +GG LS+ + V ++V DIND P F S P++ +V E G
Sbjct: 414 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 473
Query: 120 VGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V A DAD G NA + Y V D PF ++ TG I LD E+ Y
Sbjct: 474 VLHVQAVDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFY 526
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------------AASYFNLDPATEHQ-- 73
+G +++ V A D+D+ ++ Y++ NT + LD E Q
Sbjct: 575 VGTSVVTVSAVDRDA--HSVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYV 632
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G TA + + VTD N P FQS Y +V E + G V + ATD D G
Sbjct: 633 LAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 692
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + IP F +DA+TG + T LDYE Q Y
Sbjct: 693 ENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSY 731
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 33/181 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPATE---- 71
Y A + G + ++A D D G+ G +EY L D+ ++ +F+LDP T
Sbjct: 136 YQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSN--QFFSLDPITGAVTT 193
Query: 72 -------------HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ QD G S+ AT+ I VTD ND +P F+ Y+ S+ E +
Sbjct: 194 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 253
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV-------PEDIPFVVDANTGDIRTNKALDYEKQQL 168
G V V ATD D NA + Y + P ++ F +D +G IRT +D E+ +
Sbjct: 254 VGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEV-FEIDPRSGVIRTRGPVDREEVES 312
Query: 169 Y 169
Y
Sbjct: 313 Y 313
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLDPATEHQGPIQD- 78
+++Q+ ATD+DSG G V Y + + LD Q ++
Sbjct: 783 SVLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAY 842
Query: 79 --EGGLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
+ G+ T V + V D+ND P F+ ++ V E GLAV RV ATD DEG
Sbjct: 843 AVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGT 902
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 903 NAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYEDRPEYV 943
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSSTA 86
G T++ + ATD+D+G+ + Y + D+ F +D A Q + E +S T
Sbjct: 678 GTTVVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTL 733
Query: 87 TVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
+ R V D+ND P+F Y+ SV E +V ++ ATD D
Sbjct: 734 AITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRD 793
Query: 130 EGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N V+Y+ D F+V++ +G +RT + LD E Y+ R + + K
Sbjct: 794 SGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYAVDK 846
Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 32/163 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G+ + +V ATD D G + Y++++ N F LD + + D
Sbjct: 886 IGLAVARVTATDPDEGTNAQIMYQIVEGNI--PEVFQLDIFSGELTALVDLDYEDRPEYV 943
Query: 79 ------EGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRV 123
L S ATV++R+ D ND P + F S P G A+GRV
Sbjct: 944 LVIQATSAPLVSRATVHVRLLDRNDNPPVLGNFEILFNNYVTNRSSSFPGG----AIGRV 999
Query: 124 HATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
A D D + + ++ V ++A+TG++R ++ALD +
Sbjct: 1000 PAHDPDISDSLTYSFERGNELSLVLLNASTGELRLSRALDNNR 1042
Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 32/136 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASY-------------FN 65
LG ++ V+A D D+G +EYRL ++N T S F
Sbjct: 470 LGYLVLHVQAVDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFYSFG 529
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
++ A +H P L+++A+V++ V D+ND NP F Y + E G +V V
Sbjct: 530 VE-ARDHGTP-----ALTASASVSVTVLDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVS 583
Query: 125 ATDADEGQNAVVYYSV 140
A D D ++V+ Y +
Sbjct: 584 AVDRDA--HSVITYQI 597
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 100 PEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV------PEDIPFVVDANT 152
P+FQ Y+ +VPE Q G V + A D DEG+ + Y++ + F +D T
Sbjct: 129 PQFQPPSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPIT 188
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G + T + LD E + ++ RV
Sbjct: 189 GAVTTAEELDRETKSTHVFRV 209
>gi|359319304|ref|XP_536515.4| PREDICTED: cadherin-6 [Canis lupus familiaris]
Length = 930
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 73/150 (48%), Gaps = 30/150 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G ++QV ATD D +G V Y +L YF+++ T
Sbjct: 164 YTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQ----GQPYFSVESETGIIKT 219
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F PE
Sbjct: 220 ALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPE 279
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVPE 142
G +GR+ A+DAD G+NA + YS+ E
Sbjct: 280 SSPPGTPIGRIKASDADMGENAEIEYSITE 309
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F Y +VPE D G V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPIFTKDVYTATVPEMSDVGTFVVQVTATDADDPTYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 207 YFSVESETGIIKTALLNMDRENREQY 232
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H+ D D G ++ Y + F+++ NTGDI+ K LD E++ +Y+
Sbjct: 68 GSDYQYVGKLHS-DQDRGDGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYIL 126
Query: 172 RVFLISK 178
R I++
Sbjct: 127 RAQAINR 133
>gi|156404209|ref|XP_001640300.1| predicted protein [Nematostella vectensis]
gi|156227433|gb|EDO48237.1| predicted protein [Nematostella vectensis]
Length = 2493
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 76/166 (45%), Gaps = 15/166 (9%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDP 68
Y + G +++QVKA D DSG +V + + D N L+
Sbjct: 447 YHTSIAENSRWGTSVLQVKAIDPDSGPTNVVYSIVSSSGHDRCFRINPQGLITLSCTLNY 506
Query: 69 ATEHQGPIQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVH 124
T+H +G LSSTA V + VTD N PEF+ Y V E G +V V
Sbjct: 507 NTKHVYVFSVSASDGMLSSTALVYVNVTDSNTHAPEFKRRSYSAEVKEDASLGTSVLTVL 566
Query: 125 ATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
ATD D G NA + YS+ +P F VD TG I+T +LD EK Y
Sbjct: 567 ATDRDTGSNAKISYSIATLVPEFSVDETTGVIKTAGSLDREKVDTY 612
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 83/172 (48%), Gaps = 28/172 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------N 65
Y A + +G ++ V+A+D DSG G V+Y +L+++ D +++
Sbjct: 132 IYAADIPEDKSIGDFVLAVRASDADSGSNGEVKYCILNSDGDNSAFSIGEVSGAVTVMKK 191
Query: 66 LD----PATEHQGPIQDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFS----VPEGQ 115
LD P Q QD+G +ATV +++T D+ND P+F Y + VP Q
Sbjct: 192 LDREKVPTYTLQVQAQDQGNPPRSATVTVKITLLDVNDCTPQFSKKVYSATIREDVPVNQ 251
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE--DIPFV-VDANTGDIRTNKALDYE 164
V V ATD D+G N V++ + D+ F ++ G++R + LDYE
Sbjct: 252 ---LVTTVRATDCDQGSNGEVFFEIVSGNDMNFFSINRINGEVRVKQKLDYE 300
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 29/171 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A R+ + + V+ATD D G G V + ++ N ++F+++
Sbjct: 239 YSATIREDVPVNQLVTTVRATDCDQGSNGEVFFEIVSGND--MNFFSINRINGEVRVKQK 296
Query: 71 ---EHQGPI------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
E G QD+G L + TV+I + D+ND P+F S ++ +PE A
Sbjct: 297 LDYEMIGVFNLLVTAQDKGQPFLYNQTTVDIALIDVNDNAPQFVSSHFQTMIPE---NYA 353
Query: 120 VG----RVHATDADEGQNAVVYYS-VPEDIPFVVDANTGDIRTNKALDYEK 165
VG RV A D D G N + +S + D+PF ++ NTG I + LD EK
Sbjct: 354 VGQEFYRVQAYDKDHGTNGEITFSFMQNDLPFSINENTGGISIKEELDREK 404
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 75/171 (43%), Gaps = 25/171 (14%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLL-DNNTDAASYFNLDPAT---------------E 71
E+G + V A+D DSG G++ Y + N +A+YF++D T
Sbjct: 34 EVGTVVATVSASDPDSGSNGMIRYSMSPSQNLMSATYFSIDQITGVITTKRGLDREFLDR 93
Query: 72 HQGPIQDEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
H ++ E G L + I V D+ND P F+ Y +PE + G V V A+
Sbjct: 94 HFFRVKAEDGGEPSLEGYMDLTINVLDVNDNGPIFERNIYAADIPEDKSIGDFVLAVRAS 153
Query: 127 DADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
DAD G N V Y + ++ F + +G + K LD EK Y +V
Sbjct: 154 DADSGSNGEVKYCILNSDGDNSAFSIGEVSGAVTVMKKLDREKVPTYTLQV 204
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 76/173 (43%), Gaps = 34/173 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y A ++ LG +++ V ATD+D+G + Y + F++D T G I+
Sbjct: 548 YSAEVKEDASLGTSVLTVLATDRDTGSNAKISYSI----ATLVPEFSVDETT---GVIKT 600
Query: 79 EGGLSS----------TAT------------VNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
G L TAT V I + D+ND +P F YE V E +
Sbjct: 601 AGSLDREKVDTYRFEVTATDHGIPQLKAKSFVYIHIADVNDNDPVFLKPSYEAKVREDIR 660
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPED----IPFVVDANTGDIRTNKALDYE 164
G V V A+DAD G+NA + YS + F +D+ G IRT K LD E
Sbjct: 661 PGGRVIEVSASDADIGKNAQIIYSFASNGDGQGTFTIDSTQGIIRTLKPLDRE 713
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN--------NTDAASY------- 63
+ M + + +G +V+A DKD G G + + + N NT S
Sbjct: 344 FQTMIPENYAVGQEFYRVQAYDKDHGTNGEITFSFMQNDLPFSINENTGGISIKEELDRE 403
Query: 64 ----FNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
F +G EG TA + I + DIND P+F Y S+ E + G
Sbjct: 404 KVPKFTFGIKARDKGVPFKEG----TAQITITLLDINDNPPKFSQEEYHTSIAENSRWGT 459
Query: 119 AVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
+V +V A D D G VVY V D F ++ G I + L+Y + +Y+ V
Sbjct: 460 SVLQVKAIDPDSGPTNVVYSIVSSSGHDRCFRINPQ-GLITLSCTLNYNTKHVYVFSV 516
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 72/174 (41%), Gaps = 24/174 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------- 67
Y A R+ G +++V A+D D GK + Y N D F +D
Sbjct: 651 YEAKVREDIRPGGRVIEVSASDADIGKNAQIIYSFASNG-DGQGTFTIDSTQGIIRTLKP 709
Query: 68 ------PATEHQGPIQDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQDGLA 119
P E D+G A+V ++V D+ D P F+ YE +VPE +
Sbjct: 710 LDRETIPEYELTVVATDQGTPPGQASVKVKVILEDVKDSPPLFEKPLYEVTVPEDTPPRS 769
Query: 120 -VGRVHATDAD-EGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
V V A D + ++Y V + P F ++ NTG I+T LDYE Q Y
Sbjct: 770 PVITVKAKSQDLSPETGMMYSIVRGNSPQVFDINPNTGAIQTLMKLDYETQSEY 823
>gi|354501665|ref|XP_003512910.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16-like [Cricetulus
griseus]
Length = 3070
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 28/162 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGPI 76
G +++V A D D G G V Y L +F++DP + E Q +
Sbjct: 485 GSFVVRVTAQDPDQGTNGQVTYSLAPGTH--THWFSIDPTSGIITTAATLDYELEPQPQL 542
Query: 77 ---QDEGGLS---STATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+GGL S+ATV++ + D+ND P+FQ Y S+PEG Q G +V ATDAD
Sbjct: 543 IVLATDGGLPPLVSSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDAD 602
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEK 165
G ++ YS+ I PF +DA++GD+ T + LD ++
Sbjct: 603 SGSFGLLSYSLGAGIGASGSPPFRIDAHSGDVCTTRTLDRDQ 644
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 75/147 (51%), Gaps = 21/147 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDN--NTDAASYFNLDPAT-----------EHQGPI 76
G + + A D D+G FG ++Y LL+ + F+L+ +T EH G
Sbjct: 2494 GTLVTTLHAIDGDAGTFGRLQYSLLEAMPGPEGREAFSLNSSTGELRARVPFDYEHTGSF 2553
Query: 77 Q------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ D G LS++ TV++ VT ++ +P F + + F VPEG Q G ++G V ATD D
Sbjct: 2554 RLLVGAADAGNLSASVTVSVLVTGEDEYDPVFLAPTFHFQVPEGAQRGHSLGHVQATDED 2613
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDI 155
G + +V YS+ P F ++ TG +
Sbjct: 2614 GGADGLVLYSLATSSPYFGINQTTGAL 2640
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 74/162 (45%), Gaps = 29/162 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY--------------RLLDNNTDAASY 63
FY A + + G +QV ATD DSG FGL+ Y R+ ++ D +
Sbjct: 578 FYNASLPEGTQPGTCFLQVTATDADSGSFGLLSYSLGAGIGASGSPPFRIDAHSGDVCTT 637
Query: 64 FNLDPATEHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEG 114
LD QGP D GGL S V + V D ND P+F Y S+ +
Sbjct: 638 RTLD---RDQGPSSFDFTVTAIDGGGLKSIVYVKVFVADENDNPPQFYPREYAASLSAQS 694
Query: 115 QDGLAVGRVHATDADEGQNA-VVYYSVPEDIP--FVVDANTG 153
G AV RVHA D D+G + + Y+ + + P F +DA++G
Sbjct: 695 TPGTAVLRVHAHDPDQGPHGQLSYHILAGNSPPLFALDAHSG 736
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 27/173 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + R+ G +L+ +KATD D G G V Y + + F+LDP T
Sbjct: 1426 YSVLLRENSPPGTSLLTLKATDPDLGANGQVTYGGVSGES-----FSLDPNTGVLTTLRA 1480
Query: 71 ---EHQGPI------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
E Q I +D G L + A V + V D ND P F + VPEGQD
Sbjct: 1481 LDREEQEEINLTVYARDRGSPPLLTHAIVRVTVEDENDHTPTFGNTHLSLEVPEGQDPQT 1540
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ + A+D D+G N + Y + + P F +D +G+ T + LD E + +
Sbjct: 1541 LTILRASDPDKGLNGQLQYRILDGDPSGAFTLDLTSGEFGTMRPLDREVEPAF 1593
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 73/158 (46%), Gaps = 20/158 (12%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL---------------DPATEHQGPI 76
TL ++A+D D G G ++YR+LD + A +L +PA + Q
Sbjct: 1540 TLTILRASDPDKGLNGQLQYRILDGDPSGAFTLDLTSGEFGTMRPLDREVEPAFKLQIEA 1599
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQN 133
+D G LS+T V + V D ND P F Y VPE G + ++ A D D+G N
Sbjct: 1600 RDGGQPALSATLLVTVTVLDANDHAPAFPVPAYSVEVPEDAPSGTLLLQLQAHDPDDGDN 1659
Query: 134 AVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
V Y + F+++ +G++RT ALD E Y
Sbjct: 1660 GRVMYYLGAGTAGAFLLEPTSGELRTATALDREHCASY 1697
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 72/160 (45%), Gaps = 24/160 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDA---ASYFNLDPATEHQGP 75
+G L+ V+A+D D G GLV + L LD N+ A A + + HQ
Sbjct: 2389 VGAELLHVEASDADPGPHGLVRFTLSSGDPLGLFELDENSGALRLAHPLDCETQARHQLV 2448
Query: 76 IQ--DEGGLS-STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEG 131
+Q D G + V + V D+ND P F S+ E Q G V +HA D D G
Sbjct: 2449 VQAADPAGTHFALVPVTVEVLDVNDHGPAFPLNLLSTSLAENQPPGTLVTTLHAIDGDAG 2508
Query: 132 QNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYE 164
+ YS+ E +P F ++++TG++R DYE
Sbjct: 2509 TFGRLQYSLLEAMPGPEGREAFSLNSSTGELRARVPFDYE 2548
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 80/172 (46%), Gaps = 35/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G ++ +V ATD+DSG G + Y L + D+ + F + P T EHQ
Sbjct: 1117 GTSVGRVFATDRDSGPNGRLTYSLRQLSEDSKA-FRIHPQTGEVTTLQSLDREHQSSFQL 1175
Query: 76 ---IQDEGG--LSSTATVNIRVTDINDKNPEF--------QSLPYEF--SVPEGQDGLAV 120
+QD G S+T TV+I V D+ND +P F LP + VP G V
Sbjct: 1176 LVHVQDSGSPPRSTTGTVHIAVLDLNDNSPTFLQASGAAGGGLPIQVPDRVPPGT---LV 1232
Query: 121 GRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ A D DEG+N + Y++ P F + +TG++ T +L ++ Y+
Sbjct: 1233 TTLQAKDPDEGENGTILYTLTGPGSELFSLHPHTGELHTAASLIRAERPHYV 1284
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A +++ + DIND P F Y V E G V +V A+DAD G N V Y +
Sbjct: 235 ALLDVTLLDINDHAPAFNQSRYHAVVSESLAPGSPVLQVFASDADAGANGAVTYEINRRQ 294
Query: 143 ---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D PF +D++TG +R + LD+E+++++
Sbjct: 295 SEGDGPFSIDSHTGLLRLERPLDFEQRRVH 324
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY 138
G + TATV + + + ND +P P +V E Q G +VGRV ATD D G N + Y
Sbjct: 1079 GQQTGTATVRVSILNQNDHSPRLSEEPTFLAVAENQPPGTSVGRVFATDRDSGPNGRLTY 1138
Query: 139 SVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
S+ + F + TG++ T ++LD E Q +
Sbjct: 1139 SLRQLSEDSKAFRIHPQTGEVTTLQSLDREHQSSF 1173
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 65/158 (41%), Gaps = 30/158 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G L+Q++A D D G G V Y L A F L+P + EH
Sbjct: 1643 GTLLLQLQAHDPDDGDNGRVMYYL---GAGTAGAFLLEPTSGELRTATALDREHCASYAF 1699
Query: 78 --------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-----GQDGLAVGRVH 124
G LS+T + I V D+ND P F + P +P + LA+ +
Sbjct: 1700 SVNAVDGAAAGPLSTTVPITITVRDVNDHAPTFPTSPLRLRLPRSVPSLSRPTLALATLR 1759
Query: 125 ATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKA 160
A D D G NA + Y + P VD+ TG+IR ++
Sbjct: 1760 AEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARS 1797
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 75/167 (44%), Gaps = 15/167 (8%)
Query: 5 PIPSALEMTSDSLFYGAMARDKHEL---GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA 61
P P+AL + + G AR + L G ++ AT +G +V R LD A
Sbjct: 1332 PGPAALHVVARDPDLGEAARVSYRLAAGGHGHFRLHAT---TGALSVV--RPLDREQRAE 1386
Query: 62 SYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAV 120
+ A +H P + SST + + V DIND+ P F Y + E G ++
Sbjct: 1387 HVLTVV-ALDHGSPPR-----SSTQLLTVSVVDINDEAPAFPHQEYSVLLRENSPPGTSL 1440
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQ 167
+ ATD D G N V Y F +D NTG + T +ALD E+Q+
Sbjct: 1441 LTLKATDPDLGANGQVTYGGVSGESFSLDPNTGVLTTLRALDREEQE 1487
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
SS V + V D+ND P F Y +VPE G + V A+DAD G + +V +++
Sbjct: 2355 SSAVPVTVTVLDVNDNPPVFTQASYRVTVPEDMPVGAELLHVEASDADPGPHGLVRFTLS 2414
Query: 142 EDIP---FVVDANTGDIRTNKALDYEKQQLY 169
P F +D N+G +R LD E Q +
Sbjct: 2415 SGDPLGLFELDENSGALRLAHPLDCETQARH 2445
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG---- 74
Y A + G +++V A D D G G + Y +L N+ F LD H G
Sbjct: 686 YAASLSAQSTPGTAVLRVHAHDPDQGPHGQLSYHILAGNS--PPLFALD---AHSGLLTV 740
Query: 75 --PI--------------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ QD GGL + A VNI + P F+ L Y FSVPE
Sbjct: 741 AWPLARRANSVVQLEIGAQDGGGLQAEPIARVNISIVPGTPTPPIFEQLQYVFSVPEDVA 800
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
G +VG V A + G+ V ++ P F +++ +G ++T + LD E LE
Sbjct: 801 PGTSVGIVQAHNP-PGRLGPVALTLSGGDPQGLFSLESPSGLLKTIRPLDRELLGPVLE 858
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 70/180 (38%), Gaps = 39/180 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + L L+QV+A D D G G + Y L + A F++DP
Sbjct: 1948 YVAFLPESRPLEGPLLQVEADDLDQGSGGQISYSLAASQP-ARGLFHVDPATGTITTTAI 2006
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
AT+ P L +AT+ + V D ND P P+E V E
Sbjct: 2007 LDREIWAETRLVLMATDRGSP-----ALVGSATLTVMVIDTNDNRPTIPQ-PWELRVSED 2060
Query: 114 GQDGLAVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + +V D D G V++Y S P+D PF + G + LD+E+ Y
Sbjct: 2061 ALLGSEIAQVTGNDVDSG--PVLWYVLSPSGPQD-PFSIGRYGGRVSLTGPLDFEQCDHY 2117
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 63/147 (42%), Gaps = 28/147 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------- 68
Y M + G ++ V ATD+DSG G + Y L F++DP
Sbjct: 2152 LYQVMMLEHTPPGSAILSVSATDRDSGANGHISYHL----ASPGEGFSVDPNNGTLFTTV 2207
Query: 69 ---ATEHQGP--------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG- 114
A +GP +D G G + ATV++++ D ND P F Y +V E
Sbjct: 2208 GAVALGQEGPGVVDVVLEARDHGAPGRVARATVHVQLQDQNDYAPSFTLPHYRVAVSEDL 2267
Query: 115 QDGLAVGRVHATDADEGQ-NAVVYYSV 140
G + + ATDAD + +A V YS+
Sbjct: 2268 PPGSTLLTLEATDADGSRTHATVDYSI 2294
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 44/93 (47%), Gaps = 15/93 (16%)
Query: 82 LSSTATVNIRVTDINDKNPEF-------QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
L + A + VTD+ND P F + LP E ++P G V RV A D D+G N
Sbjct: 448 LRAEAAFVLHVTDVNDNAPAFDRQLYRPEPLP-EVALP----GSFVVRVTAQDPDQGTNG 502
Query: 135 VVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
V YS+ F +D +G I T LDYE
Sbjct: 503 QVTYSLAPGTHTHWFSIDPTSGIITTAATLDYE 535
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 66/173 (38%), Gaps = 31/173 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH----------------- 72
G + ++A D DSG V + LL F +DP T H
Sbjct: 906 GTPIYTLRALDPDSGANSQVTFSLLAGGD---GMFTVDPITGHIRLMGPLGPPGGPAYEL 962
Query: 73 QGPIQDEGGLSSTATVNIRVT----DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+ +D G T+ +RV I+ P F S Y +P G + +V A
Sbjct: 963 EVEARDGGSPPRTSHFRLRVVIQDLGIHGLAPRFDSPTYRVDLPSSTTTGTQILQVQAQA 1022
Query: 128 ADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D + V Y + D PF ++ +G + ALD E Q+LY +V +S
Sbjct: 1023 PD---GSPVTYHLAADGASNPFGLEPQSGWLWVRAALDRESQELYTLKVMAVS 1072
>gi|426245749|ref|XP_004016666.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16 [Ovis aries]
Length = 3155
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 82/162 (50%), Gaps = 28/162 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGP- 75
G +++V A D D G G V Y L +F++DP + E Q
Sbjct: 487 GSFVVRVTARDPDQGTNGQVTYSLAPGAH--TRWFSIDPTSGIVTTAALLDYELEPQPQL 544
Query: 76 --IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ +GGL SS+ATV++ + D+ND P+FQ Y S+PEG Q G +V ATDAD
Sbjct: 545 IVVATDGGLPPLSSSATVSVVLQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDAD 604
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEK 165
G ++ YS+ + PF +DA++GD+ T + LD ++
Sbjct: 605 SGPFGLLSYSLGAGLGTSGSPPFRIDAHSGDVCTTRTLDRDQ 646
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 22/161 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT--DAASYFNLDPAT--- 70
SL ++A ++ G + + A D D+G FG + Y LL+ + F L+ +T
Sbjct: 2611 SLLSTSLAENQPP-GTLVTTLHAIDGDAGAFGRLHYSLLEAGPGPEGREAFALNSSTGEL 2669
Query: 71 --------EHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
EH G Q D G LS++ TV++ VT ++ +P F + + F VPEG +
Sbjct: 2670 RARVAFDYEHTGSFQLLVGATDAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQVPEGAR 2729
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDI 155
G ++G V ATD D G + +V YS+ P F ++ TG +
Sbjct: 2730 RGHSLGHVQATDEDGGADGLVLYSLAASSPYFGINQTTGAL 2770
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 80/180 (44%), Gaps = 30/180 (16%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------ 70
L Y + R+ G +L+ ++ATD D G G V Y + F+LDP T
Sbjct: 1554 LEYSVLLRENSPPGTSLLTLQATDPDLGTNGQVTYGGISGEN-----FSLDPDTGVLTTL 1608
Query: 71 -----EHQGPIQ-----DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG 117
E Q I +GG L + TV + V D ND P F S VPEGQD
Sbjct: 1609 RALDREEQEEINLTVYARDGGSPPLLTHVTVRVAVEDENDHAPAFGSAHLSLEVPEGQDP 1668
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQ---QLYLE 171
+ + A+D D G N + Y + + P FV+D +G+ T + LD E + QL +E
Sbjct: 1669 QTLTTLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQLQIE 1728
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 73/162 (45%), Gaps = 28/162 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQ 73
+G L+ V+A+D D G GLV + L ++ D F LD ++ HQ
Sbjct: 2519 VGAELLHVEASDADPGPHGLVRFTL--SSGDPLGLFELDESSGDLRLARPLDCETQARHQ 2576
Query: 74 GPIQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
+Q G + A V I V D+ND P F S+ E Q G V +HA D D
Sbjct: 2577 LVVQAADPAGAHFALAPVTIEVQDVNDHGPAFPLSLLSTSLAENQPPGTLVTTLHAIDGD 2636
Query: 130 EGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYE 164
G ++YS+ E P F ++++TG++R A DYE
Sbjct: 2637 AGAFGRLHYSLLEAGPGPEGREAFALNSSTGELRARVAFDYE 2678
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 20/158 (12%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL---------------DPATEHQGPI 76
TL ++A+D D G G ++YR+LD + A +L +PA + Q
Sbjct: 1670 TLTTLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQLQIEA 1729
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQN 133
+D G LS+T V + V D ND P F Y VPE G + ++ A D D G N
Sbjct: 1730 RDGGQPALSATLLVTVTVLDANDHAPAFPVPSYSVEVPEDAPAGTLLLQLQAHDPDAGAN 1789
Query: 134 AVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
V Y + F+++ ++G++RT LD E+ Y
Sbjct: 1790 GRVTYYLGTGAAGAFLLEPSSGELRTATTLDREQCPSY 1827
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 63/143 (44%), Gaps = 20/143 (13%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-NTDAASYFNLDPAT------ 70
FY A + + G +QV ATD DSG FGL+ Y L T + F +D +
Sbjct: 580 FYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGTSGSPPFRIDAHSGDVCTT 639
Query: 71 ----EHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDG 117
QGP D GGL S V + V+D ND P+F Y S+ + G
Sbjct: 640 RTLDRDQGPSSFDFTVTAVDGGGLKSMVYVKVFVSDENDNPPQFYPREYAASLSAQSAPG 699
Query: 118 LAVGRVHATDADEGQNAVVYYSV 140
AV RV A D D+G + + Y +
Sbjct: 700 TAVLRVRAHDPDQGPHGRLSYHI 722
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 68/158 (43%), Gaps = 30/158 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPI--- 76
G L+Q++A D D+G G V Y L T AA F L+P++ Q P
Sbjct: 1773 GTLLLQLQAHDPDAGANGRVTYYL---GTGAAGAFLLEPSSGELRTATTLDREQCPSYAF 1829
Query: 77 -------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-----GQDGLAVGRVH 124
G LS+T V I V D+ND P F + P +P L + +
Sbjct: 1830 TVNAVDSAAAGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGPVLSTPTLPLATLR 1889
Query: 125 ATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKA 160
A D D G NA + Y + P VD+ TG+IR +++
Sbjct: 1890 AEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVSRS 1927
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 74/167 (44%), Gaps = 32/167 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------ATEHQ------- 73
G ++QV+A D G V Y L + S F L+P A +H+
Sbjct: 1014 GTQVLQVQARAPDGGP---VTYHLAADG--PGSPFGLEPQSGWLWVRAALDHEAQELYTL 1068
Query: 74 ------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
G + G ++TATV + + + ND +P P +V E Q G +VGRV AT
Sbjct: 1069 KVMAVSGSKAELGQQTATATVRVSILNQNDHSPRLSEEPTFLAVAENQPPGTSVGRVFAT 1128
Query: 127 DADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
D D G N + YS+ + F + TG++ T + LD E+Q Y
Sbjct: 1129 DRDSGLNGRLTYSLRQLSEDSKAFRIHPQTGEVTTLQTLDRERQSSY 1175
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A +++ + DIND P F Y +V E G V +V+A+DAD G N V Y +
Sbjct: 237 ALLDVTLLDINDHAPAFNQSRYHAAVSESLAPGSPVLQVYASDADAGANGAVTYEINRRQ 296
Query: 143 ---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D PF +DA+TG +R + LD+E+++++
Sbjct: 297 SEGDGPFSIDAHTGLLRLERPLDFEQRRVH 326
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
SS V + V D+ND P F Y +VPE G + V A+DAD G + +V +++
Sbjct: 2485 SSAVPVTVSVLDVNDNPPVFTRAAYRVAVPEDTPVGAELLHVEASDADPGPHGLVRFTLS 2544
Query: 142 EDIP---FVVDANTGDIRTNKALDYEKQQLY 169
P F +D ++GD+R + LD E Q +
Sbjct: 2545 SGDPLGLFELDESSGDLRLARPLDCETQARH 2575
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 77/179 (43%), Gaps = 32/179 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG--PI 76
Y A + G +++V+A D D G G + Y +L N+ F LD EH G P+
Sbjct: 688 YAASLSAQSAPGTAVLRVRAHDPDQGPHGRLSYHILAGNS--PPLFALD---EHSGLLPV 742
Query: 77 ------------------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
+D GGL + +A VNI + P F+ L Y FSVPE
Sbjct: 743 AWPLARRASSMVQLEIGARDGGGLQAEPSARVNISIVPGTPVPPVFEQLQYVFSVPEDVA 802
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
G +VG V A + G+ V ++ P F +D TG ++T + LD E LE
Sbjct: 803 PGTSVGVVQAHNP-PGRLGPVTVALSGGDPRGLFSLDGATGLLQTLRPLDRELLGPVLE 860
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 33/171 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G ++ +V ATD+DSG G + Y L + D+ + F + P T E Q
Sbjct: 1119 GTSVGRVFATDRDSGLNGRLTYSLRQLSEDSKA-FRIHPQTGEVTTLQTLDRERQSSYQL 1177
Query: 76 ---IQDEGG--LSSTATVNIRVTDINDKNPEF--------QSLPYEFSVPEG-QDGLAVG 121
+QD G S+T TV+I V D+ND +P F LP + VP+G G V
Sbjct: 1178 LVQVQDAGSPPRSTTGTVHIAVLDLNDNSPTFLQASGAAGGGLPIQ--VPDGVPPGTLVT 1235
Query: 122 RVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ A D DEG+N + Y + P F + ++G++ T L ++ Y+
Sbjct: 1236 TLQAKDPDEGENGTILYILTGPGSELFSLHPHSGELLTAAPLIRAERPHYV 1286
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
A++H P + S+T + + V D+ND+ P FQ L Y + E G ++ + ATD
Sbjct: 1523 ASDHGSPPR-----SATQLLTVSVADVNDEAPAFQQLEYSVLLRENSPPGTSLLTLQATD 1577
Query: 128 ADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQ 167
D G N V Y F +D +TG + T +ALD E+Q+
Sbjct: 1578 PDLGTNGQVTYGGISGENFSLDPDTGVLTTLRALDREEQE 1617
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 66/147 (44%), Gaps = 28/147 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------- 68
Y M + G ++ V ATD+DSG G V Y L A F++DP
Sbjct: 2282 LYQVMLLEHTPPGSAILSVSATDRDSGANGHVSYHL----ASPAEGFSIDPNNGTLFTTV 2337
Query: 69 ---ATEHQGP--------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG- 114
A H+GP +D G G ++ ATV++++ D ND P F Y +V E
Sbjct: 2338 GTVALGHEGPGMVDVVLEARDHGVPGRAARATVHVQLQDQNDHAPSFTLPHYRVAVTEDL 2397
Query: 115 QDGLAVGRVHATDADEGQ-NAVVYYSV 140
G + + ATDAD + +A V YS+
Sbjct: 2398 PPGSTLLTLEATDADGSRSHATVDYSI 2424
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 71/180 (39%), Gaps = 39/180 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + L L+QV+A D D G G + Y L + A F++DP
Sbjct: 2078 YVAFLPESRPLEGPLLQVEADDLDQGPSGQISYSLAASQP-ARGLFHVDPATGTITTTAI 2136
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
AT+ P L +AT+ + V D ND P P+E V E
Sbjct: 2137 LDREIWAETRLVLMATDRGSP-----ALVGSATLTVMVIDTNDNRPTIPQ-PWELRVSED 2190
Query: 114 GQDGLAVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + +V D D G V++Y S P+D PF V G + LD+E++ Y
Sbjct: 2191 ALLGSEIAQVTGNDVDSG--PVLWYVLSPSGPQD-PFSVGRYGGRLSLTGPLDFEQRDRY 2247
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 70/173 (40%), Gaps = 31/173 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH----------------- 72
G + ++A D DSG + + LL A F +DP T H
Sbjct: 908 GTLIYTLRALDPDSGVNSRIAFPLLAGGGGA---FTVDPTTGHIRLMGPLGPPGGPAHEL 964
Query: 73 QGPIQDEGGLSSTATVNIRVT--DINDKN--PEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
+ +D G T+ +RV D+ + P F S Y +P G G V +V A
Sbjct: 965 ELEARDGGSPPRTSHFRLRVVVQDLGTRGLAPHFDSPTYRVDLPSGTTPGTQVLQVQARA 1024
Query: 128 ADEGQNAVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D G V Y + D PF ++ +G + ALD+E Q+LY +V +S
Sbjct: 1025 PDGGP---VTYHLAADGPGSPFGLEPQSGWLWVRAALDHEAQELYTLKVMAVS 1074
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 44/93 (47%), Gaps = 15/93 (16%)
Query: 82 LSSTATVNIRVTDINDKNPEF-------QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
L + A + VTD+ND P F + LP E ++P G V RV A D D+G N
Sbjct: 450 LRAEAAFVLHVTDVNDNAPAFDRQLYRPEPLP-EVALP----GSFVVRVTARDPDQGTNG 504
Query: 135 VVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
V YS+ F +D +G + T LDYE
Sbjct: 505 QVTYSLAPGAHTRWFSIDPTSGIVTTAALLDYE 537
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD-EGQNAVVY 137
GGL+ TA +RV D N+ P F P ++PE + G + A+DAD G N+ V
Sbjct: 1333 GGLTVTA---VRVQDENEHAPAFARDPLALALPENPEPGATLYTFRASDADGPGPNSDVR 1389
Query: 138 YSVPEDIPFV----VDANTGDIRTNKALDYEKQQLYL 170
Y + P V +DA TG + + LD E L
Sbjct: 1390 YRLLRQEPPVPALRLDARTGALSAPRGLDRETTPALL 1426
>gi|348507435|ref|XP_003441261.1| PREDICTED: cadherin-23-like [Oreochromis niloticus]
Length = 3464
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 78/160 (48%), Gaps = 30/160 (18%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGPIQDE----- 79
+LG T+++V+ATD DSG F ++EY L+ D F + P+T P+ E
Sbjct: 2515 DLGTTIVRVRATDADSGLFAVIEYSLV----DGEGKFGIRPSTGEIYILSPLDRETKDHY 2570
Query: 80 ----------GG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRV 123
GG ++ V + V DIND P F Y SV E + G +V +
Sbjct: 2571 TLTAVARDNPGGSPNNRRENSVQVLVTVLDINDYRPRFSERVYNTSVFENEPSGTSVITI 2630
Query: 124 HATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKAL 161
ATD DEG+NA V Y++ P F +D NTG +R+ + L
Sbjct: 2631 KATDLDEGENAAVLYNMLGPHSDAFSLDPNTGLVRSRRLL 2670
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 77/165 (46%), Gaps = 21/165 (12%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY-------------FNLDPATEHQGPI 76
G +++QV+ATD D G+ G V YR+L N + S + + ++ H +
Sbjct: 1218 GTSILQVQATDADQGENGRVLYRILTGNNNLFSIDRDSGLVTRGLRALDRETSSSHMLEV 1277
Query: 77 Q----DEGGLSSTATVNIRVTDINDKNPEFQSLPY-EFSVPEGQD-GLAVGRVHATDADE 130
+ DEG + S+ V I V D ND+ P F Y + E G +V V ATD D
Sbjct: 1278 EAYNSDEGSMRSSVRVIIYVDDANDEVPVFTQQQYNRLGLRETAGIGTSVIVVRATDRDT 1337
Query: 131 GQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
G V Y++ D F VD +TG + T LDYE + YL V
Sbjct: 1338 GDGGAVAYALVSGSDRKFEVDVSTGLVTTVDYLDYETKTSYLMNV 1382
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 90/213 (42%), Gaps = 54/213 (25%)
Query: 4 CPIPSALEMTSDSL------------------FYGAMARDKHELGVTLMQVKATDKDSGK 45
CP P AL +TS + + G + + G + ++A D+DSG
Sbjct: 1816 CPKP-ALRLTSSTTVLVNVLDINDVTPTFPRAYEGPFEVTEGQPGPRVWTLRARDEDSGL 1874
Query: 46 FGLVEYRL-------------------------LDNNTDAASYFNLDPATEHQGPIQDEG 80
G VEY + LD T A ++N+ G
Sbjct: 1875 NGKVEYSITGGDFQNEFMVSPVEGELRVRKDVELDRETTA--FYNITVTARDLG----TP 1928
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS 139
+S+ V + V DIND +P +LPY SV EG +V RV A DAD G+NA++ Y+
Sbjct: 1929 SRNSSVLVGVYVLDINDNDPVLLNLPYNTSVSEGASIHTSVARVRAQDADSGRNALLTYN 1988
Query: 140 VP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ +D F ++ TG ++ N+ LD E+ Y
Sbjct: 1989 ITAGNQDGAFYINDTTGVVQVNRPLDRERVAEY 2021
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 79/167 (47%), Gaps = 32/167 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQ--------- 77
G +++ +KATD D G+ V Y +L ++DA F+LDP T + +Q
Sbjct: 2624 GTSVITIKATDLDEGENAAVLYNMLGPHSDA---FSLDPNTGLVRSRRLLQSSERFNLTV 2680
Query: 78 ---DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSV----PEGQDGLAVGRVHATDA 128
D+G L TA + I V D+ND P F P ++ E + L V VHATDA
Sbjct: 2681 VATDQGRPPLWGTADLIITVIDVNDNRPVFVR-PANGTIIHILEEQRPELVVYEVHATDA 2739
Query: 129 DEGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYEKQQL 168
DEG N V Y+ + F +DA TG I T LD EKQ L
Sbjct: 2740 DEGLNGEVRYAFLQTGAGNRDWENFHIDAVTGVITTTAKLDREKQAL 2786
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 76/168 (45%), Gaps = 31/168 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGPI---------- 76
G +L+++ ATD D+G FG+V Y TD F++D T Q +
Sbjct: 576 GTSLLRILATDGDAGTFGIVRYYF----TDEPDQFSIDEETGWVVLQASLDYELMRRFTL 631
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDADEG 131
+D GG +T V + V D+ND P FQ Y S+ E + + +V R+ ATD D
Sbjct: 632 TVLAKDGGGEETTGRVRVNVLDVNDNAPLFQKEAYVGSLRENEQTVQSVARIRATDEDSP 691
Query: 132 QNAVVYYSV------PEDIPFVVDANTGDIRTNKALDYE---KQQLYL 170
N V+ Y++ P+ ++ I + LDYE K +YL
Sbjct: 692 PNNVLTYTIISVSAFPDYFRIIMVEGYAVISVIRPLDYEMVPKGMIYL 739
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV-PEDI 144
TVNI++ D+ND P F PY ++PE G ++ V+A+D D+G V +S P
Sbjct: 219 TVNIQIGDVNDNAPNFHGQPYTVNIPEDTPVGRSIFMVNASDPDQGTGGSVLFSFQPPSA 278
Query: 145 PFVVDANTGDIRTNKALDYEKQQLY 169
F +D G + +ALDYE Y
Sbjct: 279 FFAIDGARGTVTVTRALDYETTTAY 303
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 74/160 (46%), Gaps = 27/160 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD------------PATEHQG--- 74
G ++++V ATD+D G ++ Y L N D F +D P E Q
Sbjct: 1643 GTSVVRVMATDRDIGPNAMLFYYLTAGNQDLT--FRMDRVTGEMVTRPSPPDRERQAEYQ 1700
Query: 75 ---PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD--GLAVGRVHATD 127
++D+G LS++ T+ +R+ D ND PEF Y + EG + G + V A D
Sbjct: 1701 LTVTVEDDGTPPLSTSTTIYVRIVDENDNAPEFPEEEYVTVLSEGPETVGATIATVTAID 1760
Query: 128 ADEGQNAVVYYSVPED---IPFVVDANTGDIRTNKALDYE 164
DEG N + Y++ F +++ TG I K LD+E
Sbjct: 1761 PDEGLNGTLRYAIASGNLIQTFNINSITGRITAVKELDFE 1800
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 72/165 (43%), Gaps = 30/165 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL-DPATEHQGPI------------ 76
G TL+ V A D D G G + Y+LL + Y L DP+ G I
Sbjct: 2411 GTTLLSVSAVDPDKGPNGQIIYQLL--HLPRGGYVRLEDPSV---GKIVANQTVDFEQVQ 2465
Query: 77 --------QDEGGLSSTAT--VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHA 125
QD G A V +R+ D+ND NP F Y+ V E D G + RV A
Sbjct: 2466 WLNFTIRAQDHGTPPRIAELPVYLRIVDVNDNNPVFVQPSYQEPVFENVDLGTTIVRVRA 2525
Query: 126 TDADEGQNAVVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
TDAD G AV+ YS V + F + +TG+I LD E + Y
Sbjct: 2526 TDADSGLFAVIEYSLVDGEGKFGIRPSTGEIYILSPLDRETKDHY 2570
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 78/192 (40%), Gaps = 29/192 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-LDPATEHQG 74
+L Y + + ++ +V+A D DSG+ L+ Y + N D A Y N +
Sbjct: 1952 NLPYNTSVSEGASIHTSVARVRAQDADSGRNALLTYNITAGNQDGAFYINDTTGVVQVNR 2011
Query: 75 PIQDEGGLSSTATVNIR-------------------VTDINDKNPEFQSLPYEFSVPEGQ 115
P+ E T T+ +R + D ND P F Y + E
Sbjct: 2012 PLDRERVAEYTLTITVRDNPENPRIARRDSDFLVITILDENDNRPVFTRTSYRAEITENS 2071
Query: 116 -DGLAV----GRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDI--RTNKALDYEKQ 166
G V G V A D D G+NAVV Y + P F VDA+TG I R LD E
Sbjct: 2072 AAGTTVTVLNGPVLAEDKDIGRNAVVKYHLLGPRVDLFAVDADTGVILVRQGAKLDREAF 2131
Query: 167 QLYLERVFLISK 178
Q +FL+++
Sbjct: 2132 QEPRVELFLVAE 2143
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 81/177 (45%), Gaps = 33/177 (18%)
Query: 30 GVTLMQVKATDKDSGK-FGLV----------EYRLLDNNTDAASYFNLDPATEHQ----- 73
G T++ V ATD D+ + FG ++RL + + + LD + +
Sbjct: 787 GATVLLVNATDLDASREFGQASLIYSLEGSSQFRLNSRSGEITTTALLDRELKSEYILIV 846
Query: 74 -------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHA 125
GP Q G ATVNI + DIND P ++ PY +V E V V A
Sbjct: 847 RAVDGGVGPQQKTG----IATVNITILDINDNAPMWRDEPYNANVVEMSPINTDVISVLA 902
Query: 126 TDADEGQNAVVYYSV-PEDIPFVVDANTGDIRTNKA-LDYEK---QQLYLERVFLIS 177
D D G+N V YS+ PE+ + ++++TG IRT+ LD E + L R ++S
Sbjct: 903 VDPDNGENGTVIYSINPENPFYTINSSTGKIRTSGVTLDRESTNPRDTVLMRTIVVS 959
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLD---------------------PATEHQG 74
V A DKD G+ +V+Y LL D F +D P E
Sbjct: 2084 VLAEDKDIGRNAVVKYHLLGPRVD---LFAVDADTGVILVRQGAKLDREAFQEPRVELFL 2140
Query: 75 PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQN 133
+D GGL+++ + + + D ND P F + +PE G+ V ++ ATDAD G N
Sbjct: 2141 VAEDIGGLNNSVPLTVTILDQNDNPPVFSPSSFSVRLPENSPTGVVVTQLSATDADSGSN 2200
Query: 134 AVVYY---SVPEDIPFVVDANTGDIRT-NKALDYEKQQLYLERVFLIS 177
+ Y S ED FVV+A +G + N LD E++ Y R+ +I+
Sbjct: 2201 GWLTYRLESGAED-RFVVEALSGAVLVGNTTLDREERGSY--RLVIIA 2245
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV- 140
+ TATV + V D+ND P F YE S+ E G ++ +V ATDAD+G+N V Y +
Sbjct: 1183 TGTATVFVEVQDVNDNRPIFLQNSYETSILESVPRGTSILQVQATDADQGENGRVLYRIL 1242
Query: 141 -PEDIPFVVDANTGDI-RTNKALDYEKQQLYLERV 173
+ F +D ++G + R +ALD E ++ V
Sbjct: 1243 TGNNNLFSIDRDSGLVTRGLRALDRETSSSHMLEV 1277
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
S++ TV + + D+ND +P F +LP VPEG G + R+ D DE +N ++ ++
Sbjct: 971 SASTTVFVNLLDLNDNDPTFLNLPSVAEVPEGLPIGSSFFRIQVEDPDEDKNGLITLALQ 1030
Query: 142 EDIP---FVVDANTGDIRTNKALDYEKQQLYLERVF 174
+P F ++ +TG + ++ LD E+ Y R+
Sbjct: 1031 MGMPRLDFYLNISTGVLTSSAVLDREQIGQYQLRII 1066
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 70/175 (40%), Gaps = 42/175 (24%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG--------------------- 74
++A DKD G + + L NN++ YF + P T QG
Sbjct: 473 IQAEDKDEGVNSMFQVFLTGNNSE---YFTISP-TAVQGRADIRMRVAMPLDFEQIRSFS 528
Query: 75 -------PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
I D G A V I + + ND P F Y S+PE G ++ R+ AT
Sbjct: 529 FSLYANESISDHVGF---ARVFIELINENDNRPIFSRPLYNISLPENTPPGTSLLRILAT 585
Query: 127 DADEGQNAVV-YYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
D D G +V YY E F +D TG + +LDYE L R F ++ A
Sbjct: 586 DGDAGTFGIVRYYFTDEPDQFSIDEETGWVVLQASLDYE-----LMRRFTLTVLA 635
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 76/178 (42%), Gaps = 46/178 (25%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--FNLDPAT-----------EHQGPI- 76
+ + +V ATD D G G V Y L + F++D T E Q +
Sbjct: 2729 LVVYEVHATDADEGLNGEVRYAFLQTGAGNRDWENFHIDAVTGVITTTAKLDREKQALLS 2788
Query: 77 -----QDEGG---LSSTATVNIRVTDINDKNPEF-----QSLPYE-FSVPE-GQDGLAVG 121
+D G +T + + ++DI+D P F LPY+ +VPE G VG
Sbjct: 2789 LIIVARDMGQPVPYETTQPLQVALSDIDDNEPVFLKPPRGGLPYQKLTVPEHSPPGTIVG 2848
Query: 122 RV-HATDADEGQNAVVYYSVPEDIPFVVDANT---------GDIRTNKALDYEKQQLY 169
+ A DADEG NA+VYY F+ N+ G+++ K LD E+ +Y
Sbjct: 2849 NITRAVDADEGSNAIVYY-------FIAGGNSDGNFGLSLDGELKVLKDLDREEIPVY 2899
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQ---NAVV 136
L+ST V + V D ND PEF Y +PE G V V+ATD D + A +
Sbjct: 750 ALNSTVPVTVEVIDENDNPPEFSKQSYIIKIPENIIAGATVLLVNATDLDASREFGQASL 809
Query: 137 YYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
YS+ F +++ +G+I T LD E + Y+
Sbjct: 810 IYSLEGSSQFRLNSRSGEITTTALLDRELKSEYI 843
Score = 42.7 bits (99), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 64/162 (39%), Gaps = 21/162 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------EHQGPIQ-- 77
+G + +++ D D K GL+ L Y N+ E G Q
Sbjct: 1005 IGSSFFRIQVEDPDEDKNGLITLALQMGMPRLDFYLNISTGVLTSSAVLDREQIGQYQLR 1064
Query: 78 ----DEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADE 130
D G +ST+T+ + V D+ND+ P F Y S+ E V R+ D D
Sbjct: 1065 IIAYDSGRFPRTSTSTLTVIVLDVNDETPTFNPRVYNVSLKESVPRDHTVARLSCFDNDA 1124
Query: 131 GQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G NA + Y + +D F V G +RT LD E Q Y
Sbjct: 1125 GLNAELSYFITDGNQDGKFSVGFRDGIVRTVVGLDRETQAAY 1166
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 29/182 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA-SYFNLDPAT------- 70
Y A R+ G ++QV+A D+ ++YR + + AA + F +D T
Sbjct: 1417 YEASLRENIATGTEVVQVQAQSADN--LNQLKYRFDPDTSPAALALFKIDSVTGRITVTG 1474
Query: 71 ---EHQGP------IQDEGG--LSSTATVNIRVTDINDKNPEFQ-SLPYEFSVPEGQ-DG 117
+G + D+GG ST V+I + D ND +PEF + Y ++ E G
Sbjct: 1475 LLDREKGDMYTLTVVADDGGPKKDSTVKVSITILDENDNSPEFDITSDYSVAIAENTPKG 1534
Query: 118 LAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANT--GDIRTNKALDYEKQQLYLE 171
V V D D G N ++ +++ ED+ + N G++ N LD E YL
Sbjct: 1535 KKVAVVLGRDRDAGLNGLINFTLVAGNMEDVFMIKTVNNTYGEVYVNAPLDRESVDRYLL 1594
Query: 172 RV 173
+V
Sbjct: 1595 KV 1596
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
LS A + I +TDI D +P F +LPY ++ E G V ++ A D D G+ + Y++
Sbjct: 318 LSRLAGLAITITDIQDMDPIFTNLPYSTNIEEDVPLGYEVRKITAIDQDLGRPRGIGYTI 377
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEK 165
+ F +D +G + N LD E
Sbjct: 378 ITGNTNSVFALDYISGSLTVNGQLDREN 405
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 70/174 (40%), Gaps = 35/174 (20%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRL----------------------LDNNTDAA 61
R+ +G +++ V+ATD+D+G G V Y L LD T +
Sbjct: 1318 RETAGIGTSVIVVRATDRDTGDGGAVAYALVSGSDRKFEVDVSTGLVTTVDYLDYETKTS 1377
Query: 62 SYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAV 120
N+ AT+ P TV + + + D+ F S YE S+ E G V
Sbjct: 1378 YLMNVS-ATDQAPPFH-----RGFCTVYVTLLNELDEAVAFFSAGYEASLRENIATGTEV 1431
Query: 121 GRVHATDADEGQNAVVYYSVPEDIP-----FVVDANTGDIRTNKALDYEKQQLY 169
+V A AD N + Y P+ P F +D+ TG I LD EK +Y
Sbjct: 1432 VQVQAQSADN-LNQLKYRFDPDTSPAALALFKIDSVTGRITVTGLLDREKGDMY 1484
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 49/118 (41%), Gaps = 18/118 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTD---------AASYFNLDPATEHQGPIQ--- 77
GV + Q+ ATD DSG G + YRL D A N E +G +
Sbjct: 2184 GVVVTQLSATDADSGSNGWLTYRLESGAEDRFVVEALSGAVLVGNTTLDREERGSYRLVI 2243
Query: 78 ---DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
D G LS TAT+ + + D+ND P F +V E G+ V + A D D
Sbjct: 2244 IATDRGTPPLSGTATLTVILDDVNDSRPRFIQPVTVINVNESTPRGVVVATLTAEDPD 2301
Score = 35.8 bits (81), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 76 IQDEGGLSSTATVNIRVTDINDKNPEFQ---SLPYEFSVPEG-QDGLAVGRVHATDADEG 131
+ D G A + I V D+ND P F+ + + + EG Q G + V A D D+G
Sbjct: 2366 VIDRSGSVPNARLTINVLDVNDNAPRFRPFGATNFTEKILEGAQPGTTLLSVSAVDPDKG 2425
Query: 132 QNAVVYYSVPEDIP-----FVVDANTGDIRTNKALDYEKQQ 167
N + Y + +P + D + G I N+ +D+E+ Q
Sbjct: 2426 PNGQIIYQLLH-LPRGGYVRLEDPSVGKIVANQTVDFEQVQ 2465
>gi|328721195|ref|XP_001944272.2| PREDICTED: cadherin-related tumor suppressor-like [Acyrthosiphon
pisum]
Length = 5057
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 77/172 (44%), Gaps = 32/172 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------------------- 68
G + ++ A+D+D+G+ + Y L++ TD F +DP
Sbjct: 1106 GTFVGKLSASDRDTGRNAELTYSLINCKTD----FWIDPKNGFIRTQREFDREQLIRATG 1161
Query: 69 --ATEHQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRV 123
+ + D G L VN+ V D+ND P F PY V EG G V RV
Sbjct: 1162 QNVISLEATVSDNGKHPLYDKTKVNVYVNDVNDNRPRFFRQPYRVQVSEGSPVGTHVLRV 1221
Query: 124 HATDADEGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ TD D+GQN V+Y++ +D F +D TG I N LD E + Y+ RV
Sbjct: 1222 YTTDEDDGQNGAVHYTMEDGDDDKFRIDNGTGMITINALLDRETRASYMLRV 1273
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 78/157 (49%), Gaps = 24/157 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------ATEHQGPIQDE- 79
E+G ++ + ++D D G YR +N + F +D A+ +QDE
Sbjct: 2793 EVGSFVIGITSSDLDIGVNAKATYRFTEN---PGNMFKIDSDTGKVYIASAIDREVQDEY 2849
Query: 80 --------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD- 129
G + + I + D+ND PEF+ Y+F+ PE Q G VGRV ATD D
Sbjct: 2850 LLNVVAADGSWQAETPLTITIQDVNDNAPEFEKSNYKFNFPETQKIGATVGRVIATDRDK 2909
Query: 130 EGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYE 164
+G N+VV +++ P D+ F +D GDI T +AL Y+
Sbjct: 2910 QGSNSVVSFNLKQPSDV-FFIDPIYGDIFTKRALKYK 2945
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 90/185 (48%), Gaps = 19/185 (10%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL--------LDNNTDA---ASYF 64
SL Y + +G T++ VKATD+D G GLV Y L+++T A A
Sbjct: 3099 SLSYQVFVPENEPIGSTVLTVKATDQDEGPNGLVRYSFENLSEKFKLNSDTGAITIAQIL 3158
Query: 65 NLDPATEHQ-GPIQDEGGL---SSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLA 119
+ + E++ I + G S AT++I +TDIND P F Q+L F + G
Sbjct: 3159 DFERIREYKLNVIAMDTGFEPKKSKATLSIMLTDINDNPPTFNQTLFNVFILENSPVGTF 3218
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
V ++ A D D +NA++ YS+ F ++ +G I + + DYEK++ Y + I
Sbjct: 3219 VTQMVAKDLDSPKNAIINYSITGGTGEHLFYFNSTSGAIFSKQVFDYEKEKSYSLEILAI 3278
Query: 177 SKFAT 181
+ +T
Sbjct: 3279 NPNST 3283
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 20/163 (12%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRL------------LDNNTDAASYFNLDPATEHQGP 75
E+G + +KA D D K G VEY + +D AS + + + ++
Sbjct: 2058 EIGTIVTVLKAVDDDEDKNGFVEYWINSGDEKTFTIGSIDGVLRVASSLDRETKSSYKLE 2117
Query: 76 I--QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
I +D G L+S + + + D ND +P F Y SVPE G V ++ ATD D
Sbjct: 2118 IGAKDRGDPSLNSIMKLTVNILDENDNSPIFDPRQYTSSVPENVTIGYTVVQLFATDKDV 2177
Query: 131 GQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
G NA + Y++ E++ F + +TG IR K L+YE++ Y+
Sbjct: 2178 GPNAGIRYTITNGDENLDFSIADDTGLIRVAKYLNYERKSRYV 2220
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 74/156 (47%), Gaps = 27/156 (17%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA---------------TEH--QGPIQD 78
VKATD DSG G V Y L D YF +D +EH D
Sbjct: 2282 VKATDADSGYNGRVRYYLKD-----TEYFTVDSVNGKIHLVRSLDREVQSEHLITAVAMD 2336
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAV 135
G LS T + + V D+ND +P+FQ Y + E G +V ++ ATD+D G NA
Sbjct: 2337 SGMPSLSGTGFIRVIVQDVNDHSPQFQQQNYVVYIDENSPIGYSVTQLTATDSDIGLNAK 2396
Query: 136 VYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ YS+ + F +D +TG +RT LD E+ ++Y
Sbjct: 2397 IKYSLLGNKQDKFQMDEDTGILRTLSNLDREENEVY 2432
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 74/168 (44%), Gaps = 27/168 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLL--DNNTD-----------AASYFNLDPATEHQGP 75
+G T++Q+ ATDKD G + Y + D N D A Y N + + +
Sbjct: 2163 IGYTVVQLFATDKDVGPNAGIRYTITNGDENLDFSIADDTGLIRVAKYLNYERKSRYVLT 2222
Query: 76 IQDEGGL--------SSTATVNIRVTDINDKNPEFQSLPYEFSV-----PEGQDGLAVGR 122
I+ E G S TV I V DIND P F PY V PE ++ V
Sbjct: 2223 IKAEDGPVGIDNRVNSDEVTVIITVLDINDNYPVFPDSPYTIHVLEEYIPESKE-FPVAI 2281
Query: 123 VHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
V ATDAD G N V Y + + F VD+ G I ++LD E Q +L
Sbjct: 2282 VKATDADSGYNGRVRYYLKDTEYFTVDSVNGKIHLVRSLDREVQSEHL 2329
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 74/175 (42%), Gaps = 26/175 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + G + + A D+D G G+V Y ++ + A FN+DP T
Sbjct: 1836 YSLDVSESRSRGTKIGDITAVDEDEGVNGVVTYSVISDW--ANDVFNIDPHTGAFSLTGK 1893
Query: 71 ----EHQGPI-----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
E Q I QD G LSST TV I V D ND P F++ Y V E
Sbjct: 1894 LDHEEVQHYIMTVQAQDAGKPMLSSTVTVYINVIDENDNAPVFETNSYNVDVYENATVNT 1953
Query: 119 AVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD D G N + YS+ ED F +D + G I ++ LD E Y
Sbjct: 1954 IVATVMATDRDSGINGKIKYSIQSIDQEDNDFTIDPDNGTIWPHRNLDRETVASY 2008
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 79/168 (47%), Gaps = 32/168 (19%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNN----------------------TDAASYFN 65
E+ L+ V ATD DSG +EY + N TD + ++
Sbjct: 3005 EVWSPLITVVATDHDSGVNAEIEYFVYGGNATDLVQVDRFSGLVSLKKKLIDTDLSKNYD 3064
Query: 66 L-DPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRV 123
L AT+H P + + V +T N+ NPEF SL Y+ VPE + G V V
Sbjct: 3065 LVIRATDHGVPPKQD-----ITDVTFTITSENNFNPEFSSLSYQVFVPENEPIGSTVLTV 3119
Query: 124 HATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
ATD DEG N +V YS E++ F ++++TG I + LD+E+ + Y
Sbjct: 3120 KATDQDEGPNGLVRYSF-ENLSEKFKLNSDTGAITIAQILDFERIREY 3166
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 73/182 (40%), Gaps = 20/182 (10%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH 72
T + + + +G + Q+ A D DS K ++ Y + + YFN
Sbjct: 3199 TFNQTLFNVFILENSPVGTFVTQMVAKDLDSPKNAIINYSITGGTGEHLFYFNSTSGAIF 3258
Query: 73 QGPIQD----------------EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ D LS + V + + +N+ P F + + VPE +
Sbjct: 3259 SKQVFDYEKEKSYSLEILAINPNSTLSGSTKVIVHIDGVNEYYPTFSQSVFYYDVPESAE 3318
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLER 172
G+ VG V ATD D G + VYY + D F +D NTG +R ++ LD E Q +
Sbjct: 3319 IGVNVGAVKATDLDAGNDGKVYYFLVGSSNDKGFTIDHNTGLLRVSRHLDRETQNRIILT 3378
Query: 173 VF 174
V
Sbjct: 3379 VL 3380
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 22/176 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN----------NTDAASYFNLD 67
FY +++ +++ V A DKD+GK ++ YRL+D+ + + + LD
Sbjct: 2680 FYTVSVQEETFPPTSVITVVAIDKDTGKNSIITYRLVDDMNGIFSIDDVSGEIVTNTKLD 2739
Query: 68 PATEHQGPIQ----DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAV 120
T+ + D+G L+ +A ++I V DIND P F L + +V E + G V
Sbjct: 2740 RETDDHYTLTVEAVDQGYPPLTGSAMIHITVLDINDNPPRFTRL-FSVNVTENTEVGSFV 2798
Query: 121 GRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ ++D D G NA Y E+ P F +D++TG + A+D E Q YL V
Sbjct: 2799 IGITSSDLDIGVNAKATYRFTEN-PGNMFKIDSDTGKVYIASAIDREVQDEYLLNV 2853
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 71/165 (43%), Gaps = 22/165 (13%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQ 73
+G + +KATD D + Y ++ +N ++S LD T H
Sbjct: 1744 IGSLVATLKATDPDLDS--TLTYTVIGDNDSSSSPLMLDAYTGNVRVRKPIDRETSPRHV 1801
Query: 74 GPIQDEGGLS-STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
P++ G+ S +V + D ND P F Y V E + G +G + A D DEG
Sbjct: 1802 LPVRVSDGVHHSDTSVVFVILDTNDNAPSFAKSVYSLDVSESRSRGTKIGDITAVDEDEG 1861
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N VV YSV D F +D +TG LD+E+ Q Y+ V
Sbjct: 1862 VNGVVTYSVISDWANDVFNIDPHTGAFSLTGKLDHEEVQHYIMTV 1906
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 77/177 (43%), Gaps = 29/177 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA------------------ 60
Y + +G +++V TD+D G+ G V Y + D + D
Sbjct: 1204 YRVQVSEGSPVGTHVLRVYTTDEDDGQNGAVHYTMEDGDDDKFRIDNGTGMITINALLDR 1263
Query: 61 ---ASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD- 116
ASY A ++ +Q L+++ATV + V D ND P+F+S P S+ E
Sbjct: 1264 ETRASYMLRVTAHDNGTTVQ----LNASATVTVEVLDDNDNPPKFESPPLGVSIYENATV 1319
Query: 117 GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ R ATD D G N+ V YS+ F +D TG + +K LDYE Y+
Sbjct: 1320 NTELVRFRATDPDLGVNSEVRYSIVSGNRRDTFHIDIVTGVLYLHKRLDYEDISAYV 1376
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 76 IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQ 132
++D G SS+ + VTD ND PEF ++ ++F + E + G VG++ A+D D G+
Sbjct: 1062 VRDAGTPARSSSVVAIVHVTDENDNKPEFANVTFDFHINENEPAGTFVGKLSASDRDTGR 1121
Query: 133 NAVVYYS-VPEDIPFVVDANTGDIRTNKALDYEK 165
NA + YS + F +D G IRT + D E+
Sbjct: 1122 NAELTYSLINCKTDFWIDPKNGFIRTQREFDREQ 1155
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVV 136
DE L S + + VTD+ND P F+ Y SV E +V V A D D G+N+++
Sbjct: 2652 DEPKLRSAVLLTVNVTDVNDNPPVFEYPFYTVSVQEETFPPTSVITVVAIDKDTGKNSII 2711
Query: 137 YYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
Y + +D+ F +D +G+I TN LD E Y
Sbjct: 2712 TYRLVDDMNGIFSIDDVSGEIVTNTKLDRETDDHY 2746
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 79/181 (43%), Gaps = 29/181 (16%)
Query: 14 SDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF--------- 64
S S+FY + + E+GV + VKATD D+G G V Y L+ ++ D
Sbjct: 3305 SQSVFYYDVP-ESAEIGVNVGAVKATDLDAGNDGKVYYFLVGSSNDKGFTIDHNTGLLRV 3363
Query: 65 --NLDPATEHQ----------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
+LD T+++ G I+ G + A V I + D ND PEF YE V
Sbjct: 3364 SRHLDRETQNRIILTVLAKNAGSIR--GNDTDEAQVIISIQDGNDP-PEFDQEYYECLVS 3420
Query: 113 EG-QDGLAVGRVHATDADEG-QNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQL 168
EG + G + VHA D D QN YS+ ++ F VD G I T D E
Sbjct: 3421 EGTRPGAKILTVHAVDKDAWPQNNQFSYSILYNMTKLFRVDPQNGTIETVGHFDRETINY 3480
Query: 169 Y 169
Y
Sbjct: 3481 Y 3481
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 72/165 (43%), Gaps = 39/165 (23%)
Query: 38 ATDKDSGKFGLV-EYRLLDNNTDAASYFNLDPATEHQGPIQ------------------- 77
ATDKD+G G+ +Y+++ N D + F LD + G +
Sbjct: 145 ATDKDAGANGVSSDYQIVAGNVD--NKFRLDVTSNPGGDLTYLYLQTTGKLDRETVAFYQ 202
Query: 78 -----DEGGLSST---ATVNIRVTDINDKNPEFQSLPYEF----SVPEGQDGLAVGRVHA 125
+GG+ + TVN+ + D+ND P F Y S P G L +V A
Sbjct: 203 LNISVRDGGVPTRYGFQTVNVTILDVNDNPPIFAHTDYSAWLNESAPPGTFAL---QVTA 259
Query: 126 TDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQL 168
TDAD G+N + Y +PE D F VD+ TG I T + + +Q
Sbjct: 260 TDADLGENGRIVYYLPETSDNRFRVDSETGAIYTTEVPNCPQQNC 304
Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 28/182 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y + + +G + + ATD+D+G + Y ++ N A +F++DP
Sbjct: 469 YSSTLSELSPVGTYVASITATDEDTGINAQIFYSIVSGN--AFGWFDIDPDTGLVTLKGR 526
Query: 69 -------ATEHQGPIQDEGGLSSTATVNIRVT--DINDKNPEF-QSLPYEFSVPEGQDGL 118
A E + +D G A ++V D ND+ PEF Q L + +
Sbjct: 527 LDREQMGAAEIKISARDGGPNPKWAYTQLKVIVLDENDERPEFTQELIVVKMLENVPENT 586
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEKQQLYLER 172
V + A+D D+G N V YS+ ++ F +D+ TG + LD EK Y +
Sbjct: 587 LVAMLTASDHDQGTNGSVSYSLHPEVQYKYKGAFALDSLTGQLTAKTQLDREKVLEYKIK 646
Query: 173 VF 174
V
Sbjct: 647 VL 648
Score = 42.4 bits (98), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 67/157 (42%), Gaps = 24/157 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRL----------------LDNNTDAASYFNLDPATEHQGPI 76
+ + A+D D G G V Y L L A + + + E++ +
Sbjct: 588 VAMLTASDHDQGTNGSVSYSLHPEVQYKYKGAFALDSLTGQLTAKTQLDREKVLEYKIKV 647
Query: 77 --QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEG 131
+D+G SSTATV + V D+ND +P F Y V + G + V A D DEG
Sbjct: 648 LAKDQGSPPKSSTATVILDVLDVNDNDPVFYPQQYVAFVGDNHPTGTNILTVSAYDVDEG 707
Query: 132 QNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEK 165
+NAVV Y S + F +DA G I + D K
Sbjct: 708 ENAVVEYRLASSGDSGLFYIDARDGSIYLKSSGDLTK 744
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 72/168 (42%), Gaps = 40/168 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------ 82
+G ++ Q+ ATD D G ++Y LL N D F +D E G ++ L
Sbjct: 2377 IGYSVTQLTATDSDIGLNAKIKYSLLGNKQDK---FQMD---EDTGILRTLSNLDREENE 2430
Query: 83 -----------------SSTATVNIRVTDINDKNPEF---QSLPYEFSVPEGQDGLAVGR 122
+S A + + D+ND P F QS+ Y + Q G +
Sbjct: 2431 VYYLTVVAQDSSLTEPKASVANLTVFAKDVNDNYPIFSTSQSIIYVSD--KTQSGQFIFG 2488
Query: 123 VHATDADEGQNA-VVYYSVPEDIP-FVVDANTGDI----RTNKALDYE 164
V A D D G N +VY+ + DI F +D NTG I + NK ++Y+
Sbjct: 2489 VTAIDLDSGDNGKIVYHLISGDIDMFHIDENTGVIESIQKLNKQMEYK 2536
Score = 39.3 bits (90), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDIPFV- 147
I V DIND P F+ Y ++ E G V + ATD D G NA ++YS+ F
Sbjct: 452 IYVNDINDHEPVFEKSEYSSTLSELSPVGTYVASITATDEDTGINAQIFYSIVSGNAFGW 511
Query: 148 --VDANTGDIRTNKALDYEK 165
+D +TG + LD E+
Sbjct: 512 FDIDPDTGLVTLKGRLDREQ 531
Score = 38.9 bits (89), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPED--- 143
V +++ D ND P + S P E+ + E G V + ATD D ++ + Y+V D
Sbjct: 1715 VKVKILDRNDNRPMWPSAPIEYKISEEIPIGSLVATLKATDPD--LDSTLTYTVIGDNDS 1772
Query: 144 --IPFVVDANTGDIRTNKALDYE 164
P ++DA TG++R K +D E
Sbjct: 1773 SSSPLMLDAYTGNVRVRKPIDRE 1795
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 56/134 (41%), Gaps = 23/134 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNN------TDAASYFNLD------PATEHQGPI 76
+G L +A DKD G G V YRL+ T+++ L P T I
Sbjct: 897 VGQELCVARAKDKDVGLNGRVTYRLVSKPDSLFRITESSGIVYLHKPVYTAPGTVLAAEI 956
Query: 77 Q--DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR----VHATDA 128
D G LS+ V + D+ND P F YE S+ E AV + ATD
Sbjct: 957 MATDSGNPPLSAKHVVLFTIQDVNDHTPVFDQTSYESSLSEAT---AVNSRFFGLTATDG 1013
Query: 129 DEGQNAVVYYSVPE 142
D G NA + Y++ E
Sbjct: 1014 DYGSNARLSYAIEE 1027
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 69/178 (38%), Gaps = 27/178 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGP 75
Y A D H G ++ V A D D G+ +VEYRL + Y + + + G
Sbjct: 682 YVAFVGDNHPTGTNILTVSAYDVDEGENAVVEYRLASSGDSGLFYIDARDGSIYLKSSGD 741
Query: 76 IQ-----------DEGGLSSTATVNIRVTDINDKNPEFQSLP-YEFSVPEGQDG------ 117
+ D G + ++ + D+ +F + Y F + E G
Sbjct: 742 LTKSIYRLNVTAVDRDGRRAAEDASVEIIKNVDETLKFDTTEGYSFQIYEDHSGQEDPIS 801
Query: 118 -LAVGRVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYLERV 173
VGRV D ++ V Y+ + D F VD N G + T K +D E Q Y R+
Sbjct: 802 NRQVGRVRVKDT---KSDVAYFILNGDNGNFRVDRN-GVLTTWKKIDRENQSFYSIRI 855
Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV 140
LSS ++ V D ND P+F S + E + G ++ V A D D N +V+YS+
Sbjct: 1389 LSSALAFHVTVLDCNDNPPQFPSTAIVRQIIENLEPGTSIVHVVADDPDSELNGLVHYSI 1448
Query: 141 PEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
+ P F ++ TG I T +D E Y
Sbjct: 1449 TQQQPDNDRRSFKINEKTGVISTVLPIDREYVDTY 1483
>gi|449266614|gb|EMC77656.1| Protocadherin-23, partial [Columba livia]
Length = 601
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 83/169 (49%), Gaps = 14/169 (8%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL-----------DNNTDAASYFNL 66
Y + + G +++V+A D+D+G L+ Y +L ++ + + +L
Sbjct: 282 LYKTAVHENRDPGEFVVKVEAVDRDAGLNSLLRYEILPGAGYEKFRMNSHSGEVVTTTSL 341
Query: 67 DPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHA 125
D T+ I+ SSTA + + V D ND NP F Y+ SV E ++G A+ + A
Sbjct: 342 DRETQDIFSIKGSPSRSSTAQLYLTVLDENDHNPLFAKTQYQISVREDLEEGSAILDLFA 401
Query: 126 TDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLER 172
+D D+G N V YS+ +D F +D TG I T KALD E + Y R
Sbjct: 402 SDEDDGLNGEVTYSLIDDTFGAFAIDNVTGSIVTTKALDRETKSQYTFR 450
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 81/168 (48%), Gaps = 31/168 (18%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ---------- 77
E+G + ++ A D D G+ G V Y +L N + A F LD T Q
Sbjct: 187 EVGFLVHRIVAKDPDEGRNGQVTYHILSGNENKA--FVLDKITGLLITTQLLDREIQERY 244
Query: 78 -------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
D+G LS+T + I V D+ND+ P F Y+ +V E +D G V +V A D
Sbjct: 245 ILTVMALDDGSPALSATQVLTILVLDVNDETPIFLKQLYKTAVHENRDPGEFVVKVEAVD 304
Query: 128 ADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
D G N+++ Y + +P F +++++G++ T +LD E Q ++
Sbjct: 305 RDAGLNSLLRYEI---LPGAGYEKFRMNSHSGEVVTTTSLDRETQDIF 349
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---PED 143
T I + D ND +P F S P + + + G V R+ A D DEG+N V Y + E+
Sbjct: 159 TAKIVILDTNDNSPSFTSSPLSCVMEDVEVGFLVHRIVAKDPDEGRNGQVTYHILSGNEN 218
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
FV+D TG + T + LD E Q+ Y+ V
Sbjct: 219 KAFVLDKITGLLITTQLLDREIQERYILTVM 249
>gi|73959343|ref|XP_537042.2| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2 isoform 1
[Canis lupus familiaris]
Length = 2926
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 84/181 (46%), Gaps = 26/181 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS-YFNLDPAT---EHQG 74
Y R+ E+G ++ V+ATD D+ + YRLL+ + S F +DP + +G
Sbjct: 297 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEIFEIDPRSGVIRTRG 356
Query: 75 PI------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D G S+TA V + V D ND P+F Y V E
Sbjct: 357 PVDREEVESYQLTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYVVQVREDVT 416
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLER 172
G V RV A+D D+G NA+V+YS+ F +DA TG + LDYE + Y R
Sbjct: 417 PGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLR 476
Query: 173 V 173
V
Sbjct: 477 V 477
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LD 67
Y R+ G +++V A+D+D G LV Y ++ N Y + LD
Sbjct: 407 YVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 466
Query: 68 PATEHQGPIQ---DEGG---LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
T + ++ +GG LS+ + V ++V DIND P F S P++ +V E G
Sbjct: 467 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 526
Query: 120 VGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V A DAD G NA + Y V D PF ++ TG I LD E+ Y
Sbjct: 527 VLHVQAIDADAGDNARLEYRLAGVGHDFPFAINNGTGWISVAAELDREEVDFY 579
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------------AASYFNLDPATEHQ-- 73
+G +++ V A D+D+ ++ Y++ NT + LD E Q
Sbjct: 628 VGTSVVTVSAVDRDA--HSVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYV 685
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G TA V + VTD N P FQS Y +V E + G V + ATD D G
Sbjct: 686 LAVTASDGTRQDTAQVVVNVTDANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 745
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + IP F +DA+TG + T LDYE Q Y
Sbjct: 746 ENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSY 784
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 82/180 (45%), Gaps = 31/180 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS--YFNLDPATE----- 71
Y A + G + ++A D D G+ G +EY +D D+ S +F+LDP T
Sbjct: 189 YQATVPENQPAGTPVASLRAIDPDEGEAGRLEY-TMDALFDSRSKQFFSLDPITGAVTTA 247
Query: 72 ------------HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD- 116
+ QD G S+ AT+ I VTD ND +P F+ Y+ S+ E +
Sbjct: 248 EELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLEV 307
Query: 117 GLAVGRVHATDADEGQNAVVYYSV-------PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G V V ATD D NA + Y + P +I F +D +G IRT +D E+ + Y
Sbjct: 308 GYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEI-FEIDPRSGVIRTRGPVDREEVESY 366
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLDPATEHQGPIQD- 78
+++Q+ ATD+DSG G V Y + + LD Q ++
Sbjct: 836 SVLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYILRAY 895
Query: 79 --EGGLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
+ G+ T V + V D+ND P F+ ++ V E GLAV RV ATD DEG
Sbjct: 896 AVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGT 955
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 956 NAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYEDRPEYI 996
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSSTA 86
G T++ + ATD+D+G+ + Y + D+ F +D A Q + E +S T
Sbjct: 731 GTTVVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTL 786
Query: 87 TVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
+ R V D+ND P+F Y+ SV E +V ++ ATD D
Sbjct: 787 AITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRD 846
Query: 130 EGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N V+Y+ D F+V++ +G +RT + LD E Y+ R + + K
Sbjct: 847 SGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYILRAYAVDK 899
Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 32/163 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G+ + +V ATD D G + Y++++ N F LD + + D
Sbjct: 939 IGLAVARVTATDPDEGTNAQIMYQIVEGNI--PEVFQLDIFSGELTALVDLDYEDRPEYI 996
Query: 79 ------EGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRV 123
L S ATV++R+ D ND P + F S P G A+GRV
Sbjct: 997 LVIQATSAPLVSRATVHVRLLDRNDNPPVLGNFEILFNNYVTNRSSSFPGG----AIGRV 1052
Query: 124 HATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
A D D + + ++ V ++A+TG++R ++ALD +
Sbjct: 1053 PAHDPDVSDSLTYSFERGNELSLVLLNASTGELRLSRALDNNR 1095
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 32/136 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASY-------------FN 65
LG ++ V+A D D+G +EYRL ++N T S F
Sbjct: 523 LGYLVLHVQAIDADAGDNARLEYRLAGVGHDFPFAINNGTGWISVAAELDREEVDFYSFG 582
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
++ A +H P+ L+++A+V++ + D+ND NP F Y + E G +V V
Sbjct: 583 VE-ARDHGTPV-----LTASASVSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVS 636
Query: 125 ATDADEGQNAVVYYSV 140
A D D ++V+ Y +
Sbjct: 637 AVDRDA--HSVITYQI 650
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 7/108 (6%)
Query: 73 QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
Q P+ G S+ + R + P+FQ Y+ +VPE Q G V + A D DEG
Sbjct: 155 QTPVLRAGERSTEEPMGGRRKRNVNTAPQFQPPSYQATVPENQPAGTPVASLRAIDPDEG 214
Query: 132 QNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ + Y++ F +D TG + T + LD E + ++ RV
Sbjct: 215 EAGRLEYTMDALFDSRSKQFFSLDPITGAVTTAEELDRETKSTHVFRV 262
>gi|397495187|ref|XP_003818441.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 isoform 2
[Pan paniscus]
Length = 4186
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 84/176 (47%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGP 75
Y A R+ +++V ATD+D GLV Y ++ N+ +F +D T + P
Sbjct: 620 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRG--HFAIDSLTGEIQVVAP 677
Query: 76 I--------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ QD G ++T +I+V DIND P F S P++ SV E G
Sbjct: 678 LDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSVLENAPLG 737
Query: 118 LAVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+V + A DAD G+NA + YS V D PFV+++ TG + + LD E + Y
Sbjct: 738 HSVIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATGWVSVSGPLDRESVEHYF 793
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQG 74
+++Q+ ATD+D+ G V+Y N D F ++P + E
Sbjct: 1049 SVLQISATDRDAHANGRVQY-TFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTA 1107
Query: 75 PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G L + ++ + V D+ND P F + +E V E G V ++ A D DEG
Sbjct: 1108 YAVDRGVPPLRTPVSIQVMVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDEG 1167
Query: 132 QNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE +Q Y+
Sbjct: 1168 PNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYV 1209
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 32/185 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPAT----- 70
Y R+ E G ++Q++ATD D+ + YR + AA+ F +DP +
Sbjct: 508 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLIST 567
Query: 71 ------EH------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH QG Q+ G S+T V+I V D ND P+F Y V
Sbjct: 568 SGRVDREHMESYELVVEASDQG--QEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVR 625
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E + V RV ATD D+ N +V+Y++ F +D+ TG+I+ LD+E ++
Sbjct: 626 EDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVVAPLDFEAERE 685
Query: 169 YLERV 173
Y R+
Sbjct: 686 YALRI 690
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V+I +TD N P FQS Y SV E + G + + A+D D G+NA + Y + +++P
Sbjct: 914 VHINITDANTHRPVFQSAHYSVSVNEDRPVGSTIVVISASDDDVGENARITYLLEDNLPQ 973
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DA++G I LDYE Q Y
Sbjct: 974 FRIDADSGAITLQAPLDYEDQVTY 997
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 29/180 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT------- 70
Y + + G +++V A D D+G+ G + Y L N+ + F++DP +
Sbjct: 400 YQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 459
Query: 71 --------EH--QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
H + QD G LS+T V + V D ND +P F+ Y ++ E ++G
Sbjct: 460 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRENVEEG 519
Query: 118 LAVGRVHATDADEGQNAVVYY--------SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ ++ ATD D NA + Y F +D +G I T+ +D E + Y
Sbjct: 520 YPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESY 579
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEH 72
S Y + +G T++ + A+D D G+ + Y L DN F +D A
Sbjct: 930 SAHYSVSVNEDRPVGSTIVVISASDDDVGENARITYLLEDN----LPQFRIDADSGAITL 985
Query: 73 QGPIQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQD 116
Q P+ E ++ T + R V D+ND P+F + Y V E
Sbjct: 986 QAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAP 1045
Query: 117 GL-AVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ++ ATD D N V Y+ D F ++ +G +RT + LD E +Y
Sbjct: 1046 PFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVY 1103
Score = 42.4 bits (98), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 72/177 (40%), Gaps = 30/177 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGPI--------- 76
LG +++ ++A D D G+ +EY L D F ++ AT GP+
Sbjct: 736 LGHSVIHIQAVDADHGENARLEYSLTGVAPDTP--FVINSATGWVSVSGPLDRESVEHYF 793
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDA 128
+D G LS++A+V + V D+ND PEF Y + E G +V V A D
Sbjct: 794 FGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGTSVVSVTAVDR 853
Query: 129 DEGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
D N+ + Y + G + LDY KQ+ Y + V S A
Sbjct: 854 DA--NSAISYQITGGNTRNRFAISTQGGVGLVTLALPLDY-KQERYFKLVLTASDRA 907
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 99 NPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDAN 151
+P+F Y+ VPE + G AV RV A D D G+ + YS+ + F +D
Sbjct: 392 HPQFPQYNYQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQ 451
Query: 152 TGDIRTNKALDYEKQQLYLERV 173
+G IRT ALD E + + RV
Sbjct: 452 SGLIRTAAALDRESMERHYLRV 473
Score = 36.2 bits (82), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 66/161 (40%), Gaps = 28/161 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPI- 76
+G + Q+ A D D G + Y++++ N + + +LD + I
Sbjct: 1152 VGSVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIV 1211
Query: 77 --QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRVHA 125
L S ATV+IR+ D ND +P + F + P G +GR+ A
Sbjct: 1212 VQATSAPLVSRATVHIRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSG----IIGRIPA 1267
Query: 126 TDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
D D + + ++ VV+ +G++R ++ LD +
Sbjct: 1268 YDPDVSDHLFYSFERGNELQLLVVNQTSGELRLSRKLDNNR 1308
>gi|195032868|ref|XP_001988576.1| GH10500 [Drosophila grimshawi]
gi|193904576|gb|EDW03443.1| GH10500 [Drosophila grimshawi]
Length = 3594
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 82/187 (43%), Gaps = 36/187 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA------TEH 72
Y + + ++QV A+D D+G + YR++D D AS + + +H
Sbjct: 1040 YAVNVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGADNASQSSASVSGVDTDLAQH 1099
Query: 73 QGPIQDEGGL----------------------------SSTATVNIRVTDINDKNPEFQS 104
G + G + + A V +RV D ND +P+F
Sbjct: 1100 FGIFPNSGWIYLRAALDRESRDRYELTVLATDNGTPAAHARARVLVRVLDSNDNDPKFLR 1159
Query: 105 LPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYS-VPEDIPFVVDANTGDIRTNKALD 162
Y F + E + G VG V ATDAD G+NA + YS +P + F V TG+I T + LD
Sbjct: 1160 ESYAFKIEENLRRGAVVGVVSATDADLGENAAIRYSLLPANSSFQVHPVTGEISTREPLD 1219
Query: 163 YEKQQLY 169
E ++LY
Sbjct: 1220 RELRELY 1226
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 24/175 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + + G +++QV+A D+D G + Y L D A +F +D T
Sbjct: 497 YHANVMEVADPGTSVLQVQARDRDEGNNAALSYALADTPDTHAQWFQIDTQTGLITTRSH 556
Query: 71 --------EHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
I +GG LSSTATV + + D+ND P F Y SV E + G
Sbjct: 557 IDCETEPVPQLTVIARDGGQPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGR 616
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
+ +V A+D D G NA+V Y++ E F V + +G+I LDYE++ Y
Sbjct: 617 CILKVSASDPDCGVNAMVNYTLGEGFKHLTEFEVRSASGEICIAGELDYERRNSY 671
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 79/168 (47%), Gaps = 33/168 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI---------- 76
G + V ATD D G+ + Y LL N S F + P T + P+
Sbjct: 1173 GAVVGVVSATDADLGENAAIRYSLLPAN----SSFQVHPVTGEISTREPLDRELRELYDL 1228
Query: 77 ----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYE--FSVPEGQD-GLAVGRVHATD 127
+D+G S+ A V + VTD+ND PE P E SV E Q G V R+ A D
Sbjct: 1229 VVEARDQGTPTRSARAPVRVTVTDVNDNAPEIAD-PQEDVVSVREEQPPGTEVVRIRAID 1287
Query: 128 ADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
D GQNA + YS+ + F +DANTG IRT LD+E++ +Y
Sbjct: 1288 RDHGQNASINYSLLKGRDSDGHGLFSIDANTGIIRTRVMLDHEERSIY 1335
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L TVNI + D+ND P F Y +VPE G +V +V+A+D D +N +V Y++
Sbjct: 254 LRGLMTVNITIQDVNDNQPIFNQSRYFATVPENATVGSSVLQVYASDTDADENGLVEYAI 313
Query: 141 -----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ F +DA TG + NK LD+E ++L+
Sbjct: 314 NRRQSDKEQMFRIDARTGAVYINKPLDFETKELH 347
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 35/173 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------EHQGPIQDEG 80
G + V AT D+ + V Y + + D YF+++PA+ +H+ Q
Sbjct: 831 GTVVGSVIATSSDTAQRSPVRYSIYSGDPDG--YFSIEPASGNIRIAHPLDHEAKAQVLL 888
Query: 81 GLSSTA---------TVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
+ +T+ VNI V D+ND PEF++ SVPE + G + HA D D
Sbjct: 889 NIQATSGEPPVYGHTQVNIEVEDVNDNAPEFETSMVRISVPENAELGTPLFAAHAHDKDS 948
Query: 131 GQNAVVYYSVPEDIP--------------FVVDANTGDIRTNKALDYEKQQLY 169
G + V YS+ F +DA +G + ++ LDYE Q +
Sbjct: 949 GSSGQVTYSLANGNATKSGKQKAAQASSLFAIDARSGHLVLSRHLDYETAQRH 1001
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L ++ ++ +RVTD+ND PEF+ Y +V E D G +V +V A D DEG NA + Y++
Sbjct: 472 LHASKSIFLRVTDVNDNAPEFELDVYHANVMEVADPGTSVLQVQARDRDEGNNAALSYAL 531
Query: 141 PEDIP------FVVDANTGDIRTNKALDYEKQ 166
D P F +D TG I T +D E +
Sbjct: 532 -ADTPDTHAQWFQIDTQTGLITTRSHIDCETE 562
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 25/157 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--FNLDPAT----------------- 70
G ++ + ATD D G FG + Y L+ D +S+ F +D +
Sbjct: 2897 GSSIFRAHATDLDRGAFGQLNYSLVAAEDDDSSWRLFRVDATSGIVSSAAVFDYEQRQRY 2956
Query: 71 EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD---GLAVGRVHATD 127
Q D GG S+ + + + ++ P+F Y F +P G VG+V ATD
Sbjct: 2957 NLQLRASDMGGRSARVALRVEIESRDEFTPQFTERTYRFVLPATTALPLGFIVGQVRATD 3016
Query: 128 ADEGQNAVVYY--SVPEDIPFVVDANTGDIRTNKALD 162
AD G + V Y S P F V+ ++G + + LD
Sbjct: 3017 ADSGADGRVVYQLSAPHS-HFKVNRSSGAVLIKRKLD 3052
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 86 ATVNIRVTDINDKNPEFQ-SLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
AT+ I + D+ND PEF+ Y SVPE + + V A+D DEG NA + YS+
Sbjct: 1837 ATLIISIGDVNDNAPEFRPGSCYGLSVPENSETAIIHTVVASDLDEGPNAEIVYSIIGGN 1896
Query: 143 -DIPFVVDANTGDIRTNKALDYEKQQLY 169
F +DA TG++ + ++LD E+ Y
Sbjct: 1897 LGNKFSIDARTGEL-SARSLDREQHSRY 1923
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 75/190 (39%), Gaps = 53/190 (27%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y A + +G +++++KA+D D G V RL+ ++L T+ Q I
Sbjct: 1963 YMASVAENAAIGSSVLRIKASDADLG----VNSRLV---------YSLANETQWQFAIDS 2009
Query: 79 EGGL------------------------------SSTATVNIRVTDINDKNPEFQSLPYE 108
+ GL S + V I V DIND P F+ PY
Sbjct: 2010 KSGLITTVGKLDRELQSSYSFMVLATDCGRYEVRSGSVAVQINVLDINDNKPIFERYPYS 2069
Query: 109 FSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPED---------IPFVVDANTGDIRTN 158
VP Q G + +V A DAD+G N V Y++ D F ++ NTG +
Sbjct: 2070 GQVPALIQPGQTLLKVQAHDADQGSNGEVLYALKADSLLGSAAIRSKFRINPNTGALSAT 2129
Query: 159 KALDYEKQQL 168
++L E L
Sbjct: 2130 QSLASETGNL 2139
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 71/168 (42%), Gaps = 29/168 (17%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY--------------RLLDNNTDA 60
D FY + +G +++V A+D D G +V Y R
Sbjct: 600 DQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTLGEGFKHLTEFEVRSASGEICI 659
Query: 61 ASYFNLDPATEHQGPI--QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG- 117
A + + ++ P+ D GGLS+TA + +++TD+ND P F P E++V + G
Sbjct: 660 AGELDYERRNSYEFPVLATDRGGLSTTAMIKLQLTDVNDNRPVF--YPREYNVSLRESGP 717
Query: 118 -------LAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
+ + V ATD D G V Y + E F +D +G+I
Sbjct: 718 AQASSTPMPIVAVVATDPDAGSFGQVSYRIVAGNEGGIFRIDRASGEI 765
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 60/129 (46%), Gaps = 8/129 (6%)
Query: 44 GKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQ 103
+ G + R LD + L A++ PI +G +++ V D ND P F+
Sbjct: 1905 ARTGELSARSLDREQHSRYTLQLQ-ASDRGQPITHQG----HCNISVFVEDQNDNEPRFE 1959
Query: 104 SLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKA 160
Y SV E G +V R+ A+DAD G N+ + YS+ + F +D+ +G I T
Sbjct: 1960 LAKYMASVAENAAIGSSVLRIKASDADLGVNSRLVYSLANETQWQFAIDSKSGLITTVGK 2019
Query: 161 LDYEKQQLY 169
LD E Q Y
Sbjct: 2020 LDRELQSSY 2028
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 45/104 (43%), Gaps = 19/104 (18%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRV----HATDADEGQNAVVYY 138
SS TV I V D+ND P + P E V E L VG + ATDAD G N + Y
Sbjct: 1472 SSAITVKIEVADVNDNAPTWPHDPIELEVSE---SLMVGSIIYNFTATDADSGTNGELQY 1528
Query: 139 SVPEDIP------------FVVDANTGDIRTNKALDYEKQQLYL 170
+ P F +D+ TG + LDYE + YL
Sbjct: 1529 RLLRYTPQLNETLEKTTPIFAMDSLTGSLSLQAPLDYESLKEYL 1572
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
LSS A + + + D ND +P+F + + EG G V +V A DADE N+ + Y +
Sbjct: 2317 LSSYAELIVELEDENDNSPQFSQRQFVATAWEGNSKGTFVAQVQAFDADENANSRMRYHI 2376
Query: 141 PE---DIPFVVD-ANTGDIRTNKALDYEKQQLYLERVF 174
+ D FV++ A +G +RTN LD E + +Y ++
Sbjct: 2377 VDGNHDNAFVIEPAFSGIVRTNIVLDREIRDVYSLKII 2414
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 64/156 (41%), Gaps = 33/156 (21%)
Query: 18 FYGAMAR----DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT---------DAASYF 64
F +M R + ELG L A DKDSG G V Y L + N A+S F
Sbjct: 919 FETSMVRISVPENAELGTPLFAAHAHDKDSGSSGQVTYSLANGNATKSGKQKAAQASSLF 978
Query: 65 NLDPATEHQG-----------------PIQDEG--GLSSTATVNIRVTDINDKNPEFQSL 105
+D + H D G LS+ T+ + V D+ND P F+
Sbjct: 979 AIDARSGHLVLSRHLDYETAQRHSLIVTATDAGLPPLSADLTILVDVQDVNDNPPVFERD 1038
Query: 106 PYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
Y +V E + + +V+A+D D G NA + Y +
Sbjct: 1039 EYAVNVSESRSINAQIIQVNASDLDTGNNARITYRI 1074
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 75/182 (41%), Gaps = 38/182 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
+ A A + + G + QV+A D D + Y ++D N D A F ++PA G ++
Sbjct: 2342 FVATAWEGNSKGTFVAQVQAFDADENANSRMRYHIVDGNHDNA--FVIEPA--FSGIVRT 2397
Query: 78 -------------------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
DEG ++ T+T+ + + D+ND P F SV E +
Sbjct: 2398 NIVLDREIRDVYSLKIIATDEGVPQMTGTSTIRVHIVDVNDNQPTFPP-SNVVSVSEATE 2456
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPEDIP--------FVVDANTGDIRTNKALDYEKQQ 167
G + V A D D + Y + D P F +D +G + + LDYE QQ
Sbjct: 2457 LGAVIASVSANDVD--TYPTLTYRLGRDSPVEVENLAVFGLDRYSGKLVLKRRLDYELQQ 2514
Query: 168 LY 169
Y
Sbjct: 2515 EY 2516
Score = 42.7 bits (99), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 19/101 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------- 71
Y A + +G +++QV A+D D+ + GLVEY + +D F +D T
Sbjct: 279 YFATVPENATVGSSVLQVYASDTDADENGLVEYAINRRQSDKEQMFRIDARTGAVYINKP 338
Query: 72 --------HQGPI--QDEGG--LSSTATVNIRVTDINDKNP 100
H+ + +D G L +TA V+IRVTD+ND P
Sbjct: 339 LDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQP 379
Score = 38.9 bits (89), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 12/124 (9%)
Query: 54 LDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
LD ++ A SY + A + P L S + + D ND P+F Y + E
Sbjct: 2837 LDYDSGATSYELIIRACDSHQP----RSLCSLQPFQLSLHDENDNAPQFPLGEYVHFLGE 2892
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYSV--PED-----IPFVVDANTGDIRTNKALDYEK 165
+ G ++ R HATD D G + YS+ ED F VDA +G + + DYE+
Sbjct: 2893 NEPAGSSIFRAHATDLDRGAFGQLNYSLVAAEDDDSSWRLFRVDATSGIVSSAAVFDYEQ 2952
Query: 166 QQLY 169
+Q Y
Sbjct: 2953 RQRY 2956
>gi|443732026|gb|ELU16918.1| hypothetical protein CAPTEDRAFT_222008 [Capitella teleta]
Length = 4878
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 82/171 (47%), Gaps = 26/171 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + +G +M+V ATD DSG G V Y + + D +F +D AT
Sbjct: 1931 YSDQVWENATIGTQIMEVSATDVDSGMNGWVRYSITGGDID--HHFEVDQATGIISVAKA 1988
Query: 71 ---EHQG------PIQDEGG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ- 115
E QG +D+ LSSTA V + + D ND P+F S P F+V E
Sbjct: 1989 LDRETQGHYNLAIEARDQSADTRDQLSSTAVVTVILKDCNDHAPQFLS-PGFFTVSEDSV 2047
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQ 166
G +V +V +D DEGQN VV +++ + F + N G IR N+ LD E +
Sbjct: 2048 IGASVYQVITSDLDEGQNGVVEFTLNDLSSFTIGKNDGVIRLNRDLDREME 2098
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 84/162 (51%), Gaps = 24/162 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDA--ASYFNLDPATEHQGPIQ---------- 77
G+ LM A D+D GK G V+Y LLD + D + F + P + +Q
Sbjct: 583 GIALMTFTAMDRDEGKNGSVQY-LLDPSVDLLYPAMFQVHPESGTLRNLQEFDRESFSDY 641
Query: 78 -------DEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATD 127
DEG L SSTAT+ I V D+ND P F Y SV EG G++V +V A+D
Sbjct: 642 TVRVIAVDEGELPLSSTATLFITVDDLNDNPPVFYPSSYYASVLEGIGTGVSVVQVTASD 701
Query: 128 ADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQL 168
AD+G NAV+ +S+ + F ++ TG I+T +AL +K L
Sbjct: 702 ADDGNNAVILFSLSHNSNSFEIERETGWIKTTEALTSKKYTL 743
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 18/159 (11%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLD------NNTDAASYFNLDPATEHQGPIQ----- 77
+G ++ QV +D D G+ G+VE+ L D D N D E + ++
Sbjct: 2048 IGASVYQVITSDLDEGQNGVVEFTLNDLSSFTIGKNDGVIRLNRDLDREMESSVEFVVIV 2107
Query: 78 -DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
D+G ++S+ T + + D ND +PE Y +V E G + ++ATDAD G N
Sbjct: 2108 NDKGTPAMTSSLTFTVAIDDANDNSPEVNPQTYSATVDEDIPIGSRLLEIYATDADVGLN 2167
Query: 134 AVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
A + Y+V P F++D++TG++ K LDYE++ Y
Sbjct: 2168 ADLRYTVISGDPNRDFLLDSHTGELSVQKRLDYERKTRY 2206
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 76 IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNA 134
+ D+G S A V + VTD+NDK PEF Y F +PE + G +G++ ATD DEG NA
Sbjct: 1795 VADDGNQRSEAKVIVEVTDVNDKTPEFTEPIYAFDIPENTRTGARLGQISATDLDEGSNA 1854
Query: 135 VVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLYL 170
+ YS+ + ++G + ALDYE+ LY+
Sbjct: 1855 ELTYSLITHWGRDKVSLHPHSGVVTLIGALDYEEVPLYI 1893
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 19/174 (10%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD----------NNTDAASYF 64
DS F + + +L + + Q+ A D D+G +G V Y +++ +N + +
Sbjct: 2242 DSPFVAYVQENVIQLPLHVAQISARDDDTGAYGRVTYSIIEGERSLFKINSSNGEITALR 2301
Query: 65 NLDPAT----EHQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
LD E D G L+ T ++IRV D ND P F+ Y V E Q +
Sbjct: 2302 TLDREEMDHYELTISAMDAGSPRLTGTGMISIRVGDDNDNKPRFEHDQYSAEVMENQAAM 2361
Query: 119 -AVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
V +V ATD D G+NA + YS+ D F +D ++G++ T +L+ E++ +Y
Sbjct: 2362 TTVVKVTATDRDTGKNADIKYSLQNDASGRFGIDQSSGEVFTLMSLNREERDVY 2415
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 68/168 (40%), Gaps = 35/168 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT--EHQG------------- 74
G L Q+ ATD D G + Y L+ +++ D + H G
Sbjct: 1837 GARLGQISATDLDEGSNAELTYSLI-------THWGRDKVSLHPHSGVVTLIGALDYEEV 1889
Query: 75 -------PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVH 124
+QD G LSST+TV I V D ND P F Y V E G + V
Sbjct: 1890 PLYILTVKVQDSGPISLSSTSTVLINVIDTNDNAPIFDPSTYSDQVWENATIGTQIMEVS 1949
Query: 125 ATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
ATD D G N V YS+ D F VD TG I KALD E Q Y
Sbjct: 1950 ATDVDSGMNGWVRYSITGGDIDHHFEVDQATGIISVAKALDRETQGHY 1997
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 77/177 (43%), Gaps = 26/177 (14%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------ 70
++ A + E+G L VKA D+D G G VEY + N A F++D +
Sbjct: 1298 MYENASISEATEVGRELFTVKAIDEDLGLNGFVEYSIAGGNVGTA--FHIDSNSGRLSLA 1355
Query: 71 -----EHQG----PIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLP-YEFSVPEGQD 116
E Q IQ D G + ST + + + D ND P F S P F +
Sbjct: 1356 SPLDYEQQSLYILEIQAHDLGTPAMVSTVSCWVNIRDENDHAPLFSSSPIVGFVTEDAPV 1415
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
+V + A D D G N V Y++ P F +DA TG I T K+LD+E + Y
Sbjct: 1416 STSVLLISAIDGDSGSNGNVLYTLKRQEPPGRAFEIDAQTGVITTAKSLDHEMAESY 1472
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 76/184 (41%), Gaps = 28/184 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y R+ LG + V ATD D+G + Y + N +F + T
Sbjct: 467 YSKEFREDLPLGSFVASVTATDNDTGINAAITYEITSGND--LGWFEIGSNTGLVITAKP 524
Query: 71 ---EHQGPIQ-----DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGL 118
E +Q +G + SS+ T++I +TD+ND+ P F S PEG + G+
Sbjct: 525 LDREQTSRVQLTILARDGAVMSYSSSTTLSITITDVNDEAPTFSPSESSLSFPEGTRAGI 584
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLER 172
A+ A D DEG+N V Y + + F V +G +R + D E Y R
Sbjct: 585 ALMTFTAMDRDEGKNGSVQYLLDPSVDLLYPAMFQVHPESGTLRNLQEFDRESFSDYTVR 644
Query: 173 VFLI 176
V +
Sbjct: 645 VIAV 648
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 76/170 (44%), Gaps = 36/170 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP----ATEHQGPIQD----- 78
++G + V A D DSG + Y +L + F +DP + ++G ++
Sbjct: 1207 DVGSQIATVSANDADSGVNAELHYSILGGD----GTFAIDPLLGQISLNKGVDRETHDSY 1262
Query: 79 ----------EGGLSSTATVNIRVTDINDKNPEFQSLPYE-FSVPEGQDGLAVGR----V 123
E LS T V++ + D ND PEF + YE S+ E + VGR V
Sbjct: 1263 RLTIMAMDNGEPPLSGTTIVSVSLLDFNDNRPEF--VMYENASISEATE---VGRELFTV 1317
Query: 124 HATDADEGQNAVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLYL 170
A D D G N V YS+ F +D+N+G + LDYE+Q LY+
Sbjct: 1318 KAIDEDLGLNGFVEYSIAGGNVGTAFHIDSNSGRLSLASPLDYEQQSLYI 1367
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 79/178 (44%), Gaps = 31/178 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL-DNN-------------------- 57
Y + +G T V+A+D DSG+ G+V+Y L+ D+N
Sbjct: 3292 YTFTVSESASVGYTFGSVRASDLDSGQDGIVQYSLVGDSNLKGFSVDIDTGVLVISDAID 3351
Query: 58 TDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQD 116
+A S LD A ++ GP+ G + V + ++D ND P+F YE S+ E +
Sbjct: 3352 REATSEIVLDVAAKNHGPVT--GDDLALCQVRVTISDANDP-PQFTQSVYEGSIREDARV 3408
Query: 117 GLAVGRVHATDADEGQNAV--VYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G V +V A D D QN+ YS+ F V+ +G + TN LD EK Y
Sbjct: 3409 GTTVLKVSAVDNDL-QNSFRSFRYSITTGNHGEMFSVNQGSGWVTTNARLDREKHGTY 3465
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 71/167 (42%), Gaps = 35/167 (20%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------------------- 68
+ ++QV A D D+G + Y L N A F +D
Sbjct: 2671 LNVLQVTAVDADTGDNARITYALEAGN--EAGMFVIDKTSGGIRTQMRLDRETVDAYQLV 2728
Query: 69 --ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHA 125
AT+H P Q +STATV + V+D ND P F S + +PE G V + +
Sbjct: 2729 VTATDHGNPRQ-----TSTATVEVHVSDKNDHPPLF-SQHFNVRLPESTPVGSFVLCITS 2782
Query: 126 TDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYL 170
TDAD G+NA Y+ F +D+ +G+I LD E + Y+
Sbjct: 2783 TDADIGENAANSYAFISSTNGQFAIDSASGNITVATPLDRESKDEYI 2829
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV-PED 143
+ V++R+ D+ND P F + ++ E D G + V A DAD G NA ++YS+ D
Sbjct: 1177 SAVDVRIKDLNDNPPVFAQSISQLTLYENTDVGSQIATVSANDADSGVNAELHYSILGGD 1236
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLY 169
F +D G I NK +D E Y
Sbjct: 1237 GTFAIDPLLGQISLNKGVDRETHDSY 1262
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 29/176 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR----------LLDNNT---------- 58
Y A + +G L+++ ATD D G + Y LLD++T
Sbjct: 2140 YSATVDEDIPIGSRLLEIYATDADVGLNADLRYTVISGDPNRDFLLDSHTGELSVQKRLD 2199
Query: 59 -DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--Q 115
+ + ++L + E QG Q LS ATV+I + D+ND P F P+ V E Q
Sbjct: 2200 YERKTRYDLVVSVEDQGDPQ----LSDRATVSIDIEDVNDCIPLFVDSPFVAYVQENVIQ 2255
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
L V ++ A D D G V YS+ E F ++++ G+I + LD E+ Y
Sbjct: 2256 LPLHVAQISARDDDTGAYGRVTYSIIEGERSLFKINSSNGEITALRTLDREEMDHY 2311
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 26/161 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ----------- 77
+G T+ +V ATD DSG G + Y + + N F +DP + ++
Sbjct: 3092 IGSTIGKVTATDNDSGPNGEISYAIANGND--LGLFVIDPTEGYISTVKELDYEQTHSVQ 3149
Query: 78 ------DEGGLSSTA--TVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDA 128
D G T I +TD ND P+F Y SV E G V + A DA
Sbjct: 3150 LNITASDHGSRVKTVWKVFIITITDENDNGPQFDEAIYRTSVEENSPRGTVVFVLTAHDA 3209
Query: 129 DEGQNAVVYYSVPED----IPFVVDANTGDIRTNKALDYEK 165
D+ N ++ YS+ D +D N ++T+ LDYE
Sbjct: 3210 DDPPNDLIKYSMMGDDQALTLLSLDGNILSVKTSAGLDYES 3250
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 18/153 (11%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----DAASYFNLDPATEHQGPIQDE---- 79
+G ++ + +TD D G+ Y + + D+AS N+ AT +DE
Sbjct: 2773 VGSFVLCITSTDADIGENAANSYAFISSTNGQFAIDSASG-NITVATPLDRESKDEYILD 2831
Query: 80 -----GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE-GQ 132
G +S +V+I + D+ND P+F Y FS+ G G +VG+V ATDAD G
Sbjct: 2832 VAANDGAYNSETSVSIFILDVNDNQPQFDMNRYSFSIVGGSPVGTSVGQVSATDADAPGP 2891
Query: 133 NAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
N+ V+Y + F + +G + + K + ++
Sbjct: 2892 NSDVFYRFKQPTSLFTIHPESGVVSSRKEVQFQ 2924
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG-LAVGRVHATDADEGQNAVVYYSV 140
LS+ + + + D ND P F + SV EG+ G L V +V A DAD G NA + Y++
Sbjct: 2634 LSAYHNLILDILDENDNAPVFSQHFFNTSVAEGEYGSLNVLQVTAVDADTGDNARITYAL 2693
Query: 141 P---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
E FV+D +G IRT LD E Y
Sbjct: 2694 EAGNEAGMFVIDKTSGGIRTQMRLDRETVDAY 2725
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 64/165 (38%), Gaps = 18/165 (10%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y + E+ V A D D G G V Y ++ N + D A P+
Sbjct: 985 YEVSVSEAEEVNSRFFDVTAVDSDIGLNGHVTYEIVGGNKERKFGIFPDGALYITQPLDR 1044
Query: 79 EG----------------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVG 121
E SS V I V D ND +P+F + + F + E G +VG
Sbjct: 1045 EAVSLYVLTIRARDMGSPQRSSLTNVTISVLDNNDNDPKFSNKTFSFELVENSPRGTSVG 1104
Query: 122 RVHATDADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEK 165
V+A+D D G+NA + Y + E F +D +G + D E
Sbjct: 1105 TVYASDRDTGRNAEMSYHIDGESSGFAIDPRSGMLVATVPFDRES 1149
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 72/179 (40%), Gaps = 33/179 (18%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG 74
D Y + ++G + V A+D D G + Y + N YF +D T G
Sbjct: 2971 DEKSYSMSIEENWQVGRVVGTVTASDADIGANAELTYSVTSGN--GTDYFVIDAET---G 3025
Query: 75 PIQDEGGLSSTATVNIRVT----------------------DINDKNPEF--QSLPYEFS 110
I ++S ++T +IN P F Y+ S
Sbjct: 3026 VISLSASVASKVNKKFQLTVAASDRGAAPRSSSTSVMVSVLEINRNAPRFTGSDQAYQTS 3085
Query: 111 VPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPE--DIP-FVVDANTGDIRTNKALDYEK 165
VPE + G +G+V ATD D G N + Y++ D+ FV+D G I T K LDYE+
Sbjct: 3086 VPESRLIGSTIGKVTATDNDSGPNGEISYAIANGNDLGLFVIDPTEGYISTVKELDYEQ 3144
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 23/142 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y A + T+++V ATD+D+GK ++Y L DA+ F +D ++ +
Sbjct: 2350 YSAEVMENQAAMTTVVKVTATDRDTGKNADIKYSL---QNDASGRFGIDQSSGEVFTLMS 2406
Query: 78 ----------------DEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
D G L SST ++ ++V D ND P+F Y + + + G
Sbjct: 2407 LNREERDVYNLVAVATDSGSLPLSSTVSIIVKVNDDNDNVPKFLLDEYNVQIRDPTRAGW 2466
Query: 119 AVGRVHATDADEGQNAVVYYSV 140
+ V A DAD G++A + YS+
Sbjct: 2467 FITGVTALDADAGESARIRYSL 2488
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 64/155 (41%), Gaps = 15/155 (9%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTD-----AASYFNLDPATEHQG-----PIQDE 79
GV+++QV A+D D G ++ + L N+ + A + D
Sbjct: 691 GVSVVQVTASDADDGNNAVILFSLSHNSNSFEIERETGWIKTTEALTSKKYTLAVSASDA 750
Query: 80 GGL--SSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVV 136
GGL + +A V I V + P F Q Y FS+ E +GR GQ ++
Sbjct: 751 GGLPAAESAIVEISVVREQEPAPIFSQPAGYSFSISEDNTAHVIGRSAGQVRASGQGQLL 810
Query: 137 YYSVPED--IPFVVDANTGDIRTNKALDYEKQQLY 169
Y + D FVV + G I+T K +D E Q Y
Sbjct: 811 YSIINGDDNGDFVVGSINGQIKTAKGIDREIVQFY 845
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 61/137 (44%), Gaps = 23/137 (16%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQ 73
++ +G + A D D+G G + YRL+ ++S F +D P ++
Sbjct: 886 KENWPVGHDVHLASAVDPDAGSNGRLTYRLMPG---SSSVFVIDEVTGMITVAQPLSQLT 942
Query: 74 GPIQD------EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRV 123
+ D +GG LSS TV+I + DIND P F YE SV E ++ V
Sbjct: 943 DSVVDLFVEAKDGGVPSLSSQQTVHIHIEDINDHTPAFDLKSYEVSVSEAEEVNSRFFDV 1002
Query: 124 HATDADEGQNAVVYYSV 140
A D+D G N V Y +
Sbjct: 1003 TAVDSDIGLNGHVTYEI 1019
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE--DIP- 145
I V DIND P FQ + Y E G V V ATD D G NA + Y + D+
Sbjct: 450 IVVNDINDHQPVFQKVSYSKEFREDLPLGSFVASVTATDNDTGINAAITYEITSGNDLGW 509
Query: 146 FVVDANTGDIRTNKALDYEK 165
F + +NTG + T K LD E+
Sbjct: 510 FEIGSNTGLVITAKPLDREQ 529
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV 140
+ S + I + N+ P F Y S+ E Q G VG V A+DAD G NA + YSV
Sbjct: 2950 MRSEVPLTISILPSNENTPLFDEKSYSMSIEENWQVGRVVGTVTASDADIGANAELTYSV 3009
Query: 141 PEDIP---FVVDANTGDI 155
FV+DA TG I
Sbjct: 3010 TSGNGTDYFVIDAETGVI 3027
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVP 141
++ TV I + D ND P+F S +E ++ E + G V + A DAD Q V YS+
Sbjct: 1703 TNKCTVQITLLDTNDSPPQFTSDLFELTMSEDSKQGDEVATLVARDAD--QTGSVTYSIR 1760
Query: 142 E--DIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
E + F +D G IR +LD E + Y E + +
Sbjct: 1761 EGSEKKFDIDPLRGVIRVIGSLDRESKP-YFELIIV 1795
Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPED--I 144
VN+ + D ND P F Y + E G + +V ATD D G N + YS+ D
Sbjct: 218 VNVTIKDYNDHPPLFDQSDYSAEINETASPGTYILKVTATDQDIGPNGQITYSIVSDDYN 277
Query: 145 PFVVDANTGDIRTNKAL 161
F +D TG++ T K L
Sbjct: 278 QFGIDPLTGEVSTLKPL 294
>gi|426249950|ref|XP_004018709.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Ovis aries]
Length = 4184
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 84/176 (47%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGP 75
Y A R+ +++V ATD+D GLV Y ++ N+ +F +D T + P
Sbjct: 528 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRG--HFAIDSLTGEIQVVAP 585
Query: 76 I--------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ QD G ++T +I+V DIND P F S P++ SV E G
Sbjct: 586 LDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLENAPLG 645
Query: 118 LAVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+V + A DAD G+N+ + YS V D PFV+++ TG + + LD E + Y
Sbjct: 646 HSVIHIQAVDADHGENSRLEYSLTGVAPDTPFVINSATGWVSVSGPLDRESVEHYF 701
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQG 74
+++Q+ ATD+D+ G V+Y N D F ++P + E
Sbjct: 957 SVLQISATDRDAHANGRVQY-TFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTA 1015
Query: 75 PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G L + ++ + V D+ND P F + +E V E G V ++ A D DEG
Sbjct: 1016 YAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDEG 1075
Query: 132 QNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE +Q Y+
Sbjct: 1076 PNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYV 1117
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 83/185 (44%), Gaps = 32/185 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPAT----- 70
Y R+ E G ++Q++ATD D+ + YR + AA F +DP +
Sbjct: 416 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARAAAADAFEIDPRSGLIST 475
Query: 71 ------EH------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH QG Q+ G S+T V+I V D ND P+F Y V
Sbjct: 476 SGRVDREHMESYELVVEASDQG--QEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVR 533
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E + V RV ATD D+ N +V+Y++ F +D+ TG+I+ LD+E ++
Sbjct: 534 EDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVVAPLDFEAERE 593
Query: 169 YLERV 173
Y R+
Sbjct: 594 YALRI 598
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V+I +TD N P FQS Y SV E + G V + A+D D G+NA + Y + +++P
Sbjct: 822 VHINITDANTHRPVFQSAHYSVSVNEDRPVGSTVVVISASDDDVGENARITYLLEDNLPQ 881
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DA++G I LDYE Q Y
Sbjct: 882 FRIDADSGAITLQAPLDYEDQVTY 905
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 77/180 (42%), Gaps = 29/180 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT------- 70
Y A+ + G +++V A D D+G+ G + Y L N+ + F++DP +
Sbjct: 308 YQALVPENEAAGTAVLRVVAQDPDTGEAGRLVYSLAALMNSRSLDLFSIDPQSGLIRTEA 367
Query: 71 --------EH--QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
H + QD G LS+T V + V D ND P F+ Y ++ E ++G
Sbjct: 368 ALDRESMDRHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRENVEEG 427
Query: 118 LAVGRVHATDADEGQNAVVYY--------SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ ++ ATD D NA + Y F +D +G I T+ +D E + Y
Sbjct: 428 YPILQLRATDGDAPPNANLRYRFVGPPAARAAAADAFEIDPRSGLISTSGRVDREHMESY 487
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEH 72
S Y + +G T++ + A+D D G+ + Y L DN F +D A
Sbjct: 838 SAHYSVSVNEDRPVGSTVVVISASDDDVGENARITYLLEDN----LPQFRIDADSGAITL 893
Query: 73 QGPIQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQD 116
Q P+ E ++ T + R V D+ND P+F + Y V E
Sbjct: 894 QAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAP 953
Query: 117 GL-AVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ++ ATD D N V Y+ D F ++ +G +RT + LD E +Y
Sbjct: 954 PFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVY 1011
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 72/177 (40%), Gaps = 30/177 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGPI--------- 76
LG +++ ++A D D G+ +EY L D F ++ AT GP+
Sbjct: 644 LGHSVIHIQAVDADHGENSRLEYSLTGVAPDTP--FVINSATGWVSVSGPLDRESVEHYF 701
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDA 128
+D G LS++A+V + V D+ND PEF Y + E G +V V A D
Sbjct: 702 FGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDATVGTSVVSVTAVDR 761
Query: 129 DEGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
D N+ + Y + G + LDY KQ+ Y + V S A
Sbjct: 762 DA--NSAISYQITGGNTRNRFAISTQGGVGLVTLALPLDY-KQERYFKLVLTASDRA 815
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 99 NPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDAN 151
+P+F Y+ VPE + G AV RV A D D G+ + YS+ + F +D
Sbjct: 300 HPQFPQYNYQALVPENEAAGTAVLRVVAQDPDTGEAGRLVYSLAALMNSRSLDLFSIDPQ 359
Query: 152 TGDIRTNKALDYEKQQLYLERV 173
+G IRT ALD E + RV
Sbjct: 360 SGLIRTEAALDRESMDRHYLRV 381
>gi|301767670|ref|XP_002919249.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 2-like [Ailuropoda melanoleuca]
Length = 2924
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 84/181 (46%), Gaps = 26/181 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS-YFNLDPAT---EHQG 74
Y R+ E+G ++ V+ATD D+ + YRLL+ + S F +DP + +G
Sbjct: 295 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEIFEIDPRSGVIRTRG 354
Query: 75 PI------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D G S+TA V + V D ND P+F Y V E
Sbjct: 355 PVDREEVESYQLTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYVVQVREDVT 414
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLER 172
G V RV A+D D+G NA+V+YS+ F +DA TG + LDYE + Y R
Sbjct: 415 PGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLR 474
Query: 173 V 173
V
Sbjct: 475 V 475
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 22/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-------------DAASYFN 65
Y R+ G +++V A+D+D G LV Y ++ N D S +
Sbjct: 405 YVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 464
Query: 66 LDPATEHQGPIQDEGG----LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
+ E+ ++ + G LS+ + V ++V DIND P F S P++ +V E G
Sbjct: 465 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 524
Query: 120 VGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V A DAD G NA + Y V D PF ++ TG I LD E+ Y
Sbjct: 525 VLHVQAIDADAGDNARLEYRLAGVGHDFPFAINNGTGWISVAAELDREEVDFY 577
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------------AASYFNLDPATEHQ-- 73
+G +++ V A D+D+ ++ Y++ NT + LD E Q
Sbjct: 626 VGTSVVTVSAVDRDA--HSVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYV 683
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G TA V + VTD N P FQS Y +V E + G V + ATD D G
Sbjct: 684 LAVTASDGTRQDTAQVVVNVTDANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 743
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + IP F +DA+TG + T LDYE Q Y
Sbjct: 744 ENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSY 782
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 82/180 (45%), Gaps = 31/180 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS--YFNLDPATE----- 71
Y A + G + ++A D D G+ G +EY +D D+ S +F+LDP T
Sbjct: 187 YQATVPENQPAGTPVASLRAIDPDEGEAGRLEY-TMDALFDSRSKHFFSLDPITGAVTTA 245
Query: 72 ------------HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD- 116
+ QD G S+ AT+ I VTD ND +P F+ Y+ S+ E +
Sbjct: 246 EELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLEV 305
Query: 117 GLAVGRVHATDADEGQNAVVYYSV-------PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G V V ATD D NA + Y + P +I F +D +G IRT +D E+ + Y
Sbjct: 306 GYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEI-FEIDPRSGVIRTRGPVDREEVESY 364
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLDPATEHQGPIQD- 78
+++Q+ ATD+DSG G V Y + + LD Q ++
Sbjct: 834 SVLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAY 893
Query: 79 --EGGLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
+ G+ T V + V D+ND P F+ ++ V E GLAV RV ATD DEG
Sbjct: 894 AVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGT 953
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 954 NAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYEDRPEYI 994
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSSTA 86
G T++ + ATD+D+G+ + Y + D+ F +D A Q + E +S T
Sbjct: 729 GTTVVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTL 784
Query: 87 TVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
+ R V D+ND P+F Y+ SV E +V ++ ATD D
Sbjct: 785 AITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRD 844
Query: 130 EGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N V+Y+ D F+V++ +G +RT + LD E Y+ R + + K
Sbjct: 845 SGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYAVDK 897
Score = 42.7 bits (99), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 32/163 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G+ + +V ATD D G + Y++++ N F LD + + D
Sbjct: 937 IGLAVARVTATDPDEGTNAQIMYQIVEGNI--PEVFQLDIFSGELTALVDLDYEDRPEYI 994
Query: 79 ------EGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRV 123
L S ATV++R+ D ND P + F S P G A+GRV
Sbjct: 995 LVIQATSAPLVSRATVHVRLLDRNDNPPVLGNFEILFNNYVTNRSSSFPGG----AIGRV 1050
Query: 124 HATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
A D D + + ++ V ++A+TG++R ++ALD +
Sbjct: 1051 PAHDPDISDSLTYSFERGNELSLVLLNASTGELRLSRALDNNR 1093
Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 32/136 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASY-------------FN 65
LG ++ V+A D D+G +EYRL ++N T S F
Sbjct: 521 LGYLVLHVQAIDADAGDNARLEYRLAGVGHDFPFAINNGTGWISVAAELDREEVDFYSFG 580
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
++ A +H P+ L+++A+V++ + D+ND NP F Y + E G +V V
Sbjct: 581 VE-ARDHGTPM-----LTASASVSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVS 634
Query: 125 ATDADEGQNAVVYYSV 140
A D D ++V+ Y +
Sbjct: 635 AVDRDA--HSVITYQI 648
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 100 PEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDANT 152
P+FQ Y+ +VPE Q G V + A D DEG+ + Y++ F +D T
Sbjct: 180 PQFQPPSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSKHFFSLDPIT 239
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G + T + LD E + ++ RV
Sbjct: 240 GAVTTAEELDRETKSTHVFRV 260
>gi|76879890|dbj|BAE45762.1| putative protein product of Nbla00548 [Homo sapiens]
Length = 656
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 20/169 (11%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL++Y + N + A + +
Sbjct: 388 ATIPESHSIGSIVRTVSARDRDAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYE 447
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
+H+ I D G ++ T +V + V D+ND +P F S Y +V E G V
Sbjct: 448 LCQKHEMTISAIDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIH 507
Query: 123 VHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y+V FV+D NTG I T LD+E +Q Y
Sbjct: 508 LNATDADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQGFLDFETKQSY 556
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 22/167 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y ++D A+ F ++P+T
Sbjct: 66 SQIFSAHVPENSPLGYTVTRVTTSDEDIGINAISRYSIMD----ASLPFTINPSTGDIVI 121
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V I VTDIND P F Y PE + G
Sbjct: 122 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNAPRFSRTSYYLDCPELTEIGS 181
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
V +V ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 182 KVTQVFATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQILKYQ 228
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 78/162 (48%), Gaps = 22/162 (13%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQG-- 74
++G L++V A D KD G VEY + LDN+T S + + +Q
Sbjct: 289 KVGTKLIRVTAIDDKDFGLNSEVEYFISNDNHLGKFKLDNDTGWISVASSLISDLNQNFF 348
Query: 75 ---PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D+G LSS ATV+I VT+ N PEF ++PE G V V A D
Sbjct: 349 ITVTAKDKGNPPLSSQATVHITVTEENYHTPEFSQSHMSATIPESHSIGSIVRTVSARDR 408
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQ 167
D N ++ YS+ E+ F ++++TG + KALDYE Q
Sbjct: 409 DAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYELCQ 450
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 69/159 (43%), Gaps = 32/159 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 502 GTTVIHLNATDADSGTNAVIAYTVQSSDSD---LFVIDPNT---GVITTQGFLDFETKQS 555
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S ATVNI++ N+ P F S Y F + E G VG V A+
Sbjct: 556 YHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFAS 615
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALD 162
D D G + V+Y + F ++ TG I + LD
Sbjct: 616 DRDLGTDGEVHYLIFGNSRKKGFQINKKTGQIYVSGILD 654
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
S++ V I + D ND P F + + VPE G V RV +D D G NA+ YS+
Sbjct: 46 STSVKVMINILDENDNAPRFSQI-FSAHVPENSPLGYTVTRVTTSDEDIGINAISRYSIM 104
Query: 142 E-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ +PF ++ +TGDI ++ L+ E Y RV
Sbjct: 105 DASLPFTINPSTGDIVISRPLNREDTDRYRIRV 137
>gi|355687592|gb|EHH26176.1| hypothetical protein EGK_16078 [Macaca mulatta]
Length = 4981
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 83/170 (48%), Gaps = 22/170 (12%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL++Y + N + A + +
Sbjct: 3096 ATIPESHSVGSIVRTVSARDRDAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYE 3155
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
+H+ I D G ++ T +V + V D+ND +P F S Y +V E G V
Sbjct: 3156 LCQKHEMTISAIDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIH 3215
Query: 123 VHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y+V D+ FVVD NTG I T LD+E +Q Y
Sbjct: 3216 LNATDADSGTNAVIAYTVQSSDSDL-FVVDPNTGVITTQGFLDFETKQSY 3264
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F +DP + E +
Sbjct: 1756 GSKIMQLTAMDADEGANALVTYTIISGADDS---FRIDPESGDLIATRRLDRERRSKYSL 1812
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQ 132
D+G SS +NI V+D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1813 LVRADDGLQSSDMRINITVSDVNDHTPKFSRPMYSFDIPEDTIPGSLVAAILATDDDSGV 1872
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG + LDYE QQ Y+ V
Sbjct: 1873 NGEITYIVNEDDEDGIFFLNPITGVFNLTRVLDYEVQQYYILTV 1916
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 24/162 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V A DKDSG G ++Y +++ N + + FN++ AT ++
Sbjct: 2687 ILTVSAVDKDSGPNGQLDYEIVNGNMENS--FNINHATGEIRSVRPLDREKVSYYVLTIK 2744
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G S + +V I + D ND P F + + VPE G V RV +D D G
Sbjct: 2745 SSDKGSPSQSTSVKVMINILDENDNAPRFSQI-FSAHVPENSPLGYTVTRVTTSDEDIGI 2803
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA+ YS+ + +PF ++ +TGDI ++ L+ E Y RV
Sbjct: 2804 NAISRYSIMDTSLPFTINPSTGDIVISRPLNREDTDRYRIRV 2845
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 75/173 (43%), Gaps = 21/173 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-----------AASYFNL 66
FY A + +++V A+D D G GL+ Y ++ N + A L
Sbjct: 1214 FYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEERQFAIDITSGQVALIGKL 1273
Query: 67 D----PATEHQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
D PA D G L+ST T+NI + D ND P F V E + G
Sbjct: 1274 DYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGEL 1333
Query: 120 VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD+D G NA +YYS+ F + NTG I K LD+E Q LY
Sbjct: 1334 VSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGSIFLAKKLDFETQSLY 1386
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 75/162 (46%), Gaps = 23/162 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI----QDEGGL--- 82
G L+ ++ATD D G G V + L + TD S F LDP + I ++E
Sbjct: 599 GTELLMLRATDGDLGDNGTVRFSLQEAETDRRS-FRLDPVSGRLSTISSLDREEQAFYSL 657
Query: 83 ------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
SS +N+ + DIND +P F + Y + E + G + + V ATD D
Sbjct: 658 LVLATDLGSPPQSSMTRINVSLLDINDNSPVFYPVQYFAHIKENEPGGSYITTVSATDPD 717
Query: 130 EGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V YS+ + F V+A +G I T ALD E++ Y
Sbjct: 718 LGTNGTVKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAY 759
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 22/168 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y ++D + F ++P+T
Sbjct: 2774 SQIFSAHVPENSPLGYTVTRVTTSDEDIGINAISRYSIMDTSLP----FTINPSTGDIVI 2829
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V I VTD+ND P F Y PE + G
Sbjct: 2830 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPELTEIGS 2889
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
V +V ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 2890 KVTQVFATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQILKYQN 2937
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 74/155 (47%), Gaps = 18/155 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPIQD--- 78
T++QV A D D G + Y L N D A + LD T+ Q +
Sbjct: 2278 TILQVVARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELGVTQSLDRETKEQFVLMITAV 2337
Query: 79 EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNA 134
+GG L+ T T+N+ V D+ND P F S Y ++PE G V V+A+DAD NA
Sbjct: 2338 DGGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIPEDAPTGTDVLLVNASDADASTNA 2397
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
VV + + F ++ +TG I T+ LD E + Y
Sbjct: 2398 VVRI-IGGNSQFTINPSTGQIITSALLDRETKDNY 2431
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 38 ATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGGLSSTAT--- 87
ATD D G G+ YR++ N A F LD G + +GGL T
Sbjct: 159 ATDSDIGSNGVDHRSYRIIRGN--EAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQY 216
Query: 88 -------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
VN+ V DIND P F S Y+ VPE G +V +V A D
Sbjct: 217 QLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAAD 276
Query: 128 ADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ADEG NA + Y + E PF +D TG I + LD+E ++ Y
Sbjct: 277 ADEGTNADIRYRLQDEGTPFQMDPETGLITVREPLDFEARRQY 319
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +A+D DSG +EY LL+ + S +D G + D
Sbjct: 2069 VFKAQASDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATD 2128
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y+ + E G + +V A D DEG N
Sbjct: 2129 KGQPSLSSSTEVIVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQ 2188
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y + + F +D+ TG I K LD EK Y
Sbjct: 2189 VRYGIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTY 2225
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 76/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3210 GTTVIHLNATDADSGTNAVIAYTVQSSDSD---LFVVDPNT---GVITTQGFLDFETKQS 3263
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S ATVN+++ N+ P F S Y F + E G VG V A+
Sbjct: 3264 YHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFAS 3323
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F ++ TG I + LD EK+ ERV L
Sbjct: 3324 DRDLGTDGEVHYLIFGNSRKKGFQINKKTGQIYVSGILDREKE----ERVSL 3371
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 71/168 (42%), Gaps = 18/168 (10%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF---NLDPAT 70
D L Y + + +V+A+DKDSG G + Y + + NT DA F L +
Sbjct: 997 DQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGNTGDAFGIFPDGQLYIKS 1056
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E +QD LS+T V + + D+ND P F S Y F E Q G
Sbjct: 1057 ELDRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAG 1116
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
VG+V A D D G N V YS P F + +G+I D E
Sbjct: 1117 SFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHTISGEITNTYQFDRE 1164
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L ATV++ + DIND P+F Y+ ++ E L V RV A+D DEG N +++YS+
Sbjct: 1190 LKDQATVHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSI 1249
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E+ F +D +G + LDYE Y
Sbjct: 1250 IKGNEERQFAIDITSGQVALIGKLDYEATPAY 1281
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 77/162 (47%), Gaps = 22/162 (13%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQG-- 74
++G L++V A D KD G VEY + LDN+T S + + +Q
Sbjct: 2997 KVGTKLIKVIAIDDKDFGLNSEVEYFISNDNHLGKFKLDNDTGWISVASSLISDLNQNFC 3056
Query: 75 ---PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D+G LSS ATV I VT+ N PEF ++PE G V V A D
Sbjct: 3057 ITVTAKDKGNPPLSSQATVEITVTEENYHTPEFSQSHMSATIPESHSVGSIVRTVSARDR 3116
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQ 167
D N ++ YS+ E+ F ++++TG + KALDYE Q
Sbjct: 3117 DAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYELCQ 3158
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 27/165 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGPI--- 76
G ++QV A D D G G V Y +++ NT+ F +D P + P
Sbjct: 2170 GTDIIQVFAADGDEGTNGQVRYGIVNGNTNQE--FRIDSVTGAITVAKPLDREKTPTYHL 2227
Query: 77 ----QDEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDA 128
D G + T+TV+I + DIND P F+ PY +VPE L + +V A D
Sbjct: 2228 TVQAADRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPENLRTLPRTILQVVARDD 2287
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D+G N+ + Y + ED F + A +G++ ++LD E ++ ++
Sbjct: 2288 DQGSNSKLSYVLFGGNEDNAFTLSA-SGELGVTQSLDRETKEQFV 2331
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 71/174 (40%), Gaps = 32/174 (18%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGG--- 81
+ + G ++ Q KA D D G G+V Y L N + + + GP+ + G
Sbjct: 904 ENWQAGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINGKNGTISLLGPLDVQAGSYQ 963
Query: 82 ------------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
LSS+ + + V D+ND +P F L YE ++ E + +V A+D
Sbjct: 964 IEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDK 1023
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYLERV 173
D G N + Y++ E NTGD + LD E Q Y+ V
Sbjct: 1024 DSGANGEIAYTIAE-------GNTGDAFGIFPDGQLYIKSELDRELQDRYVLMV 1070
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1724 AEVEITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTYTIISGA 1783
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ + LD E++ Y
Sbjct: 1784 DDSFRIDPESGDLIATRRLDRERRSKY 1810
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LSS+ +V + VTD+ND P FQ PY +P G V V TDAD G N+ ++YS+
Sbjct: 2446 LSSSTSVLVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSFVFAVTVTDADIGPNSELHYSL 2505
Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 70/164 (42%), Gaps = 35/164 (21%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD--EGGLS---------- 83
+ ATD DSG + Y ++ N +F++ +EH G + GGL
Sbjct: 497 ISATDGDSGLNANLRYSIVSGN--GLGWFHI---SEHSGLVTTGAAGGLDRELASQIVLN 551
Query: 84 ------------STATVNIRVTDINDKNPEF-QSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
S A + + + D+ND+ P F Q Y+ SV E G + + ATD D
Sbjct: 552 ISARDQGVHPKVSYAQLVVTLLDVNDEKPRFSQPEGYDVSVVENAPTGTELLMLRATDGD 611
Query: 130 EGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V +S+ E F +D +G + T +LD E+Q Y
Sbjct: 612 LGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFY 655
Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
G ++ VNI V D+ND +P F Q++ V Q G ++ + A D DEG N +V Y
Sbjct: 871 GTVTGDTMVNITVKDLNDNSPHFLQAIESVDVVENWQAGHSIFQAKAVDPDEGVNGMVLY 930
Query: 139 SV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
S+ P+++ F ++ G I LD + +E
Sbjct: 931 SLKQNPKNL-FAINGKNGTISLLGPLDVQAGSYQIE 965
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
SS ++I V D+ND P F+ P+ + E + V A D D G N + Y +
Sbjct: 2649 FSSYEKLDITVLDVNDNAPIFKEDPFVSEILENLSPRKILTVSAVDKDSGPNGQLDYEIV 2708
Query: 142 E---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ F ++ TG+IR+ + LD EK Y+
Sbjct: 2709 NGNMENSFNINHATGEIRSVRPLDREKVSYYV 2740
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N V Y + +
Sbjct: 1515 VTILVTDLNDNVPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEVEYEIINGDTDT 1574
Query: 146 FVVDANTGDIRTNKAL 161
F+VD +GD+R AL
Sbjct: 1575 FIVDRYSGDLRVASAL 1590
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG + Y + N F++ P T E Q
Sbjct: 1329 RIGELVSSVTATDSDSGDNADLYYSITGTNNHGT--FSISPNTGSIFLAKKLDFETQSLY 1386
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G SST +V I V D ND P F S+ E G +V V A D
Sbjct: 1387 KLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVTAHD 1446
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + Y++ + +P F +D G I TN +D E L+
Sbjct: 1447 PDADINGQLSYTIIQQMPRGNHFTIDEVKGTIYTNAEIDREFANLF 1492
Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 68/174 (39%), Gaps = 20/174 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G V+Y + + ++ LD
Sbjct: 694 YFAHIKENEPGGSYITTVSATDPDLGTNGTVKYSISAGDRSRFQVNAQSGVISTRMALDR 753
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V I V D D P F + Y F V E G VG
Sbjct: 754 EEKTAYQLQIIATDGGNLQSPNQAIVTITVLDTQDNPPVFGQVAYSFVVFENVALGYHVG 813
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A+ D N + Y D F ++ TG + T +D E+Q Y +V
Sbjct: 814 SVSASTMDLNSN-ISYLITTGDQKGMFAINQVTGQLTTANVIDREEQSFYQLKV 866
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 5/123 (4%)
Query: 59 DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
++ S++NL H P +STA V+I + D+ND P F S P +PE
Sbjct: 2009 ESQSFYNL-VVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLS-PKLTYIPENTPID 2066
Query: 118 LAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
V + A+D D G N+ + Y++ P F + G++R LD E+ Y V
Sbjct: 2067 TVVFKAQASDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2126
Query: 176 ISK 178
K
Sbjct: 2127 TDK 2129
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNAVVYYSV 140
SS A++ I V DIND P F Y ++ E G V + ATD D G NA + YS+
Sbjct: 456 SSVASLVIFVNDINDHPPVFSQQVYRVNLSEEAPPGSYVSGISATDGDSGLNANLRYSI 514
>gi|426227200|ref|XP_004007709.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 1, partial [Ovis aries]
Length = 2580
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 79/158 (50%), Gaps = 9/158 (5%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-ATEHQGPI 76
FY + +++QV ATD+DSG G + Y + + +NL A + P+
Sbjct: 634 FYQGSVFEDAPPSTSVLQVSATDRDSGPNGRLLYTFQGGDDGDGAVYNLRALAVDRGSPV 693
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAV 135
LS++ + + V DIND P F+ E V E G V R+ A+D DEG NA
Sbjct: 694 S----LSASVEIQVTVLDINDNPPVFEKDELELFVEENSPVGSVVARIRASDPDEGPNAQ 749
Query: 136 VYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
+ Y + E ++P F +D +GD+R LD+E ++ Y+
Sbjct: 750 IMYQIVEGNVPEVFQLDLLSGDLRALMELDFEVRREYV 787
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 70/144 (48%), Gaps = 25/144 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---------------------NN 57
Y R+ E+G ++ ++ATD + + YRLL+ +
Sbjct: 100 YRERVRENLEVGYEVLTIRATDGAAPSNANMRYRLLEGARGIFEIDERSGVVRTRAVVDR 159
Query: 58 TDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QD 116
+ ASY L A + QG ++ G LS+TATV+I V D ND P+F Y VPE
Sbjct: 160 EEEASYQLLVEAND-QG--RNPGPLSATATVHIVVEDENDNYPQFSEKRYVVQVPEDVAV 216
Query: 117 GLAVGRVHATDADEGQNAVVYYSV 140
V RV ATD D+GQNA ++YS+
Sbjct: 217 NTPVLRVQATDRDQGQNAAIHYSI 240
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 79/182 (43%), Gaps = 45/182 (24%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNT-------------------DAASYFNLDPATEHQ 73
+++V+ATD+D G+ + Y ++ N D + + + E+
Sbjct: 220 VLRVQATDRDQGQNAAIHYSIVSGNLKGHGNLKGQFYLHSLSGSLDVINPLDFETIREYT 279
Query: 74 GPIQDEGG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
I+ + G ++S+ V+++V D+ND P F S P++ +V E G +V + A D
Sbjct: 280 LRIKAQDGGRPPLINSSGLVSVQVLDVNDNAPIFVSSPFQAAVLENVPLGHSVLHIQAVD 339
Query: 128 ADEGQNAVVYYSVPE--------------------DIPFVVDANTGDIRTNKALDYEKQQ 167
AD G+NA + Y + + D PF + ++G I LD E+ +
Sbjct: 340 ADAGENARLRYRLVDTASASVGGGGSGPAAPPLAADFPFQIHNSSGWITVCAELDREEVE 399
Query: 168 LY 169
Y
Sbjct: 400 HY 401
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 37/170 (21%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDP------------------ 68
G +++++A D D G+ G + Y+ L D ++ YF +D
Sbjct: 3 GTAVIELRAHDPDEGEAGRLGYQMEALFDERSNG--YFLIDADTGLVSTARPLDRETKDT 60
Query: 69 ------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A +H P + S+ + + V+D ND +P F+ Y V E + G V
Sbjct: 61 HVLKVSAVDHGSPRR-----SAATYLTVTVSDTNDHSPVFEQSEYRERVRENLEVGYEVL 115
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+ ATD NA + Y + E F +D +G +RT +D E++ Y
Sbjct: 116 TIRATDGAAPSNANMRYRLLEGARGIFEIDERSGVVRTRAVVDREEEASY 165
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 21/124 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT---------DAASYFNL----DPATEHQ-- 73
+G +++ ++A D+D+ ++ Y+L NT L D E Q
Sbjct: 450 VGSSVLTLRALDRDANS--VITYQLTGGNTRNRFALSSQSGGGLITLALPPDYKQERQEV 507
Query: 74 --GPIQDEGGLSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
G + G+ S TA V I VTD N P FQS Y S+ E + G ++ + ATD D
Sbjct: 508 VGGTVTASDGMRSHTAQVFINVTDANTHRPVFQSSHYTVSISEDRPVGTSIATISATDED 567
Query: 130 EGQN 133
G+N
Sbjct: 568 TGEN 571
>gi|403284522|ref|XP_003933617.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 2, partial [Saimiri boliviensis boliviensis]
Length = 2897
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 84/181 (46%), Gaps = 26/181 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS-YFNLDPAT---EHQG 74
Y R+ E+G ++ V+ATD D+ + YRLL+ + S F +DP + +G
Sbjct: 269 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEVFEIDPRSGVIRTRG 328
Query: 75 PI------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D G S+TA V + V D ND P+F Y V E
Sbjct: 329 PVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYVVQVREDVT 388
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLER 172
G V RV A+D D+G NA+V+YS+ F +DA TG + LDYE + Y R
Sbjct: 389 PGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLR 448
Query: 173 V 173
V
Sbjct: 449 V 449
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LD 67
Y R+ G +++V A+D+D G LV Y ++ N Y + LD
Sbjct: 379 YVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 438
Query: 68 PATEHQGPIQ---DEGG---LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
T + ++ +GG LS+ + V ++V DIND P F S P++ +V E G
Sbjct: 439 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 498
Query: 120 VGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V A DAD G NA + Y V D PF ++ TG I LD E+ Y
Sbjct: 499 VLHVQAIDADAGDNARLEYHLAGVGHDFPFTINNGTGWISVAAELDREEVDFY 551
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------------AASYFNLDPATEHQ-- 73
+G +++ V A D+D+ ++ Y++ NT + LD E Q
Sbjct: 600 VGTSVVTVSAVDRDA--HSVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYV 657
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G TA + + VTD N P FQS Y +V E + G V + ATD D G
Sbjct: 658 LAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 717
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + IP F +DA+TG + T LDYE Q Y
Sbjct: 718 ENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSY 756
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 33/181 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPATE---- 71
Y A + G + ++A D D G+ G +EY L D+ ++ +F+LDP T
Sbjct: 161 YQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSN--QFFSLDPITGAVTT 218
Query: 72 -------------HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ QD G S+ AT+ I VTD ND +P F+ Y+ S+ E +
Sbjct: 219 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 278
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV-------PEDIPFVVDANTGDIRTNKALDYEKQQL 168
G V V ATD D NA + Y + P ++ F +D +G IRT +D E+ +
Sbjct: 279 VGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEV-FEIDPRSGVIRTRGPVDREEVES 337
Query: 169 Y 169
Y
Sbjct: 338 Y 338
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLDPATEHQGPIQD- 78
+++Q+ ATD+DSG G V Y + + LD Q ++
Sbjct: 808 SVLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAY 867
Query: 79 --EGGLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
+ G+ T V + V D+ND P F+ ++ V E GLAV RV ATD DEG
Sbjct: 868 AVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGT 927
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 928 NAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYEDRPEYV 968
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSSTA 86
G T++ + ATD+D+G+ + Y + D+ F +D A Q + E +S T
Sbjct: 703 GTTVVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTL 758
Query: 87 TVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
+ R V D+ND P+F Y+ SV E +V ++ ATD D
Sbjct: 759 AITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRD 818
Query: 130 EGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N V+Y+ D F+V++ +G +RT + LD E Y+ R + + K
Sbjct: 819 SGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYAVDK 871
Score = 42.7 bits (99), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 32/163 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G+ + +V ATD D G + Y++++ N F LD + + D
Sbjct: 911 IGLAVARVTATDPDEGTNAQIMYQIVEGNI--PEVFQLDIFSGELTALVDLDYEDRPEYV 968
Query: 79 ------EGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRV 123
L S ATV++R+ D ND P + F S P G A+GRV
Sbjct: 969 LVIQATSAPLVSRATVHVRLLDRNDNPPVLGNFEILFNNYVTNRSSSFPGG----AIGRV 1024
Query: 124 HATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
A D D + + ++ V ++A+TG++R ++ALD +
Sbjct: 1025 PAHDPDISDSLTYSFERGNELSLVLLNASTGELRLSRALDNNR 1067
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 100 PEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV------PEDIPFVVDANT 152
P+FQ Y+ +VPE Q G V + A D DEG+ + Y++ + F +D T
Sbjct: 154 PQFQPPSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPIT 213
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G + T + LD E + ++ RV
Sbjct: 214 GAVTTAEELDRETKSTHVFRV 234
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 32/136 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASY-------------FN 65
LG ++ V+A D D+G +EY L ++N T S F
Sbjct: 495 LGYLVLHVQAIDADAGDNARLEYHLAGVGHDFPFTINNGTGWISVAAELDREEVDFYSFG 554
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
++ A +H P L+++A+V++ V D+ND NP F Y + E G +V V
Sbjct: 555 VE-ARDHGTP-----ALTASASVSVTVLDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVS 608
Query: 125 ATDADEGQNAVVYYSV 140
A D D ++V+ Y +
Sbjct: 609 AVDRDA--HSVITYQI 622
>gi|195114028|ref|XP_002001569.1| GI16125 [Drosophila mojavensis]
gi|193912144|gb|EDW11011.1| GI16125 [Drosophila mojavensis]
Length = 5013
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 32/180 (17%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI 76
L Y + + +G T++ V ATDKD+G G++ Y ++D N + FN++ +H G I
Sbjct: 3084 LSYQVIVPENEPIGSTILTVSATDKDNGPNGMLHYNIVDGND--SENFNVN---KHTGAI 3138
Query: 77 --------------------QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
D G LS+ A V I +TD+ND P F Y + E
Sbjct: 3139 TIMQPLDYDQMQEYHLNISVTDLGYKPLSAVAMVTIILTDVNDNPPLFNQSEYHGYIEEN 3198
Query: 115 Q-DGLAVGRVHATDADEGQNAVVYY---SVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+ G V + HATD D +NA+++Y S+ D F ++A+ G + + + DYE+++ Y
Sbjct: 3199 KPSGTIVFQAHATDKDSAKNAIIHYLFLSIGTDHHFFTINASNGTVLSAASFDYEERRSY 3258
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 6/103 (5%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LS V + VTD+ND PEF PY+ ++ EG +G + V DADEG N VYYS+
Sbjct: 1089 LSDKVKVKVIVTDVNDNAPEFLRAPYQVTISEGAPEGTHIMHVFTQDADEGLNGDVYYSL 1148
Query: 141 P---EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
E F +D+ TG + LD E Q+++ R+ +++K A
Sbjct: 1149 AAGNEANLFSLDSATGLLTLAHRLDRESQEIH--RLVVVAKDA 1189
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 75/163 (46%), Gaps = 23/163 (14%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE---------------H 72
E+G T+ ++ATD D V + LL+ + S F L+P + +
Sbjct: 1680 EIGHTIATIRATDPDPDIVSTVIFTLLNGHD---SMFILEPTSGKLQLKDTLDRETKDVY 1736
Query: 73 QGPIQDEGGLSSTAT-VNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADE 130
I+ G+ T T V ++V D ND P F+ Y F +PE G VG + A DAD
Sbjct: 1737 NMRIRVNDGVQYTETDVIVQVDDTNDNPPIFEETVYSFDIPENAPRGYQVGEILAKDADL 1796
Query: 131 GQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYL 170
QNA V Y+V D F ++ TG + LDYE+ Q Y+
Sbjct: 1797 AQNAQVSYAVVSDWANDVFSLNPQTGALTLTAKLDYEEVQHYI 1839
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 83/182 (45%), Gaps = 26/182 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD--------------AA 61
S ++G + +K G + Q ATDKDS K ++ Y L TD +A
Sbjct: 3189 SEYHGYIEENKPS-GTIVFQAHATDKDSAKNAIIHYLFLSIGTDHHFFTINASNGTVLSA 3247
Query: 62 SYFNLDPA---TEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ F+ + T H + + S A +++ + +N+ P+F + F V E G
Sbjct: 3248 ASFDYEERRSYTLHIKAKNPDSIMESYAILHVHILGVNEFYPQFVQPVFHFDVSETSAVG 3307
Query: 118 LAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
AVG V ATD D G++ +YY + D F ++ NTG + ++LD E Q RV
Sbjct: 3308 TAVGSVQATDKDIGEDGRIYYLLVGSSNDRGFGINTNTGLLHVTRSLDRETQN----RVV 3363
Query: 175 LI 176
L+
Sbjct: 3364 LM 3365
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 61/112 (54%), Gaps = 7/112 (6%)
Query: 76 IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADE-GQN 133
I +G + V I + D ND PEF+ Y F+ PE Q +A VG+V ATD D+ G N
Sbjct: 2838 IASDGAWRAETPVTITIQDQNDNAPEFEHSFYSFNFPELQHAVAFVGQVIATDRDKRGPN 2897
Query: 134 AVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYL---ERVFLISKFAT 181
+V+ YS+ P F VD TG+I T + Y+ Q Y+ E +F ++ AT
Sbjct: 2898 SVISYSLQSPSPIFSVDPATGEIFTKTQIQYKHSQ-YISSPENMFSLTILAT 2948
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 71/159 (44%), Gaps = 26/159 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----EHQGPIQDE----- 79
G +M V D D G G V Y L N A+ F+LD AT H+ + +
Sbjct: 1125 GTHIMHVFTQDADEGLNGDVYYSLAAGN--EANLFSLDSATGLLTLAHRLDRESQEIHRL 1182
Query: 80 ----------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDA 128
L STA + I V D ND PEF E SV E G + R A+DA
Sbjct: 1183 VVVAKDAALKNPLKSTANITITVLDDNDNAPEFTQSSSEISVLETSPSGTELMRFRASDA 1242
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYE 164
D+G N+ V +S+ F +D+ +G + +K+LDYE
Sbjct: 1243 DQGVNSQVVFSITAGNRRDTFHIDSISGSLYLHKSLDYE 1281
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 73/171 (42%), Gaps = 30/171 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------ 76
+ + VKA D D G+ G ++Y + D T + ++P P
Sbjct: 2028 INTVVFTVKAIDNDEGRNGYIDYYIDDPRTLGQTNEVVEPLPFTLNPTDGILRVADTLDR 2087
Query: 77 ------------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
+D G L++ + + I++ D ND P F Y SV E G V
Sbjct: 2088 EIRVNYVLNITARDRGDPPLATQSQLTIKILDENDNIPVFDPKQYSASVAENASIGAMVL 2147
Query: 122 RVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ATD DEG N V YS+ ++ F + +TG +R K L+YE++ Y
Sbjct: 2148 QVSATDMDEGDNGRVRYSIVSGDQNRDFSISEDTGMVRVAKNLNYERKARY 2198
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 25/181 (13%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG 74
+ L Y A ++ ++ +KA DKDSG G V Y LL N D F ++ + E
Sbjct: 2662 EKLIYNAEVLEEESPPQFIVAIKAIDKDSGDNGEVSY-LLKN--DYNGIFEINSSGEIYT 2718
Query: 75 PIQ----------------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+Q D+G L+ TA+V + + D ND P+F L Y +V E D
Sbjct: 2719 TMQLDREEMSDYALVVEAVDQGVPQLTGTASVLLHLLDKNDNPPKFTRL-YSLNVTENAD 2777
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERV 173
G V V ++D D G+NA Y+ + F +D+ +G+I +D E+Q Y+ +V
Sbjct: 2778 IGTFVICVTSSDLDLGENANATYTFSANPGNKFKLDSQSGNITVAGEIDREQQDEYILKV 2837
Query: 174 F 174
Sbjct: 2838 I 2838
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 79/167 (47%), Gaps = 32/167 (19%)
Query: 30 GVTLMQVKATDK-DSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG------PIQ----- 77
G +++V A D D G ++Y L+ +N A YF+L+ +H G PI+
Sbjct: 2991 GQRVVKVHANDDYDVGVNAEIDYTLVSSNLSA--YFSLN---KHDGWLTLIKPIEMPANS 3045
Query: 78 ---------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHA 125
D G S V + VTD N PEF+ L Y+ VPE + G + V A
Sbjct: 3046 RFELIVKATDRGVPPQSDQTRVIVVVTDENRHAPEFKPLSYQVIVPENEPIGSTILTVSA 3105
Query: 126 TDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
TD D G N +++Y++ + F V+ +TG I + LDY++ Q Y
Sbjct: 3106 TDKDNGPNGMLHYNIVDGNDSENFNVNKHTGAITIMQPLDYDQMQEY 3152
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 78/186 (41%), Gaps = 30/186 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE---HQGP 75
Y A+ + G + + ATD+D+G V Y +L N +FN+D T GP
Sbjct: 383 YSAVLSELAPTGTFVASIAATDEDTGVNAQVYYEILTGN--ELKWFNIDTTTGLVVTAGP 440
Query: 76 IQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEG-QDGL 118
+ E S +++ R + D ND+ P F S+ E
Sbjct: 441 LDREMQASVELSISARDGGPNPKFAYTQLKVTILDENDEAPNFGQQQINVSLSEDVAPPT 500
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLER 172
V + ATD D+G N V +S+ + F +D+ TG + T KALD E Y
Sbjct: 501 LVTLLSATDNDQGTNGSVTFSLAPSVERLYPQQFAIDSITGQLMTRKALDRETMANY--E 558
Query: 173 VFLISK 178
+F+I++
Sbjct: 559 IFVIAR 564
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 18/155 (11%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDE-------- 79
++ + A+D D G G + Y ++D N D D + P+ E
Sbjct: 891 KVNTRFFALAASDSDLGANGRISYEIIDGNADRKFGVFPDGFLFVRAPLDREERDYYALT 950
Query: 80 -----GGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADE 130
G+ SS + I V D ND P F + + F++PE VG++ A D D
Sbjct: 951 VSCSDAGVPSRSSVVPIVIHVIDENDNPPHFTNSTFTFNIPENAPPDTFVGKLTAVDRDI 1010
Query: 131 GQNAVVYYSV-PEDIPFVVDANTGDIRTNKALDYE 164
G+NA + YSV + F +D + G I+T + D E
Sbjct: 1011 GRNAELSYSVLSQSQDFKIDMHNGFIKTLRPFDRE 1045
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 12/101 (11%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-------VGRVHATDADEGQNAV 135
S+TATV + V DIND NPEF Y F+V + +A + V ATD D+G NA+
Sbjct: 573 SATATVYLNVLDINDNNPEFYPKHYIFTVKDQDTDVAHKNSMQVLLNVTATDRDDGDNAL 632
Query: 136 VYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ Y++ E++ F +D+ TG I T A K+ Y R+
Sbjct: 633 ITYNLESGGENV-FQLDSRTGAI-TFTASGEMKKAYYRLRI 671
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 27/187 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
+Y A ++ +G +++ ATDKD G + + LL + + +F++D T
Sbjct: 2346 YYHATVQENLPIGSLVLKPVATDKDVGLNAKIRFNLLGEHMN---HFHIDTDTGEISTAA 2402
Query: 71 ----EHQGP------IQDEGGLSSTAT-VNIRVT--DINDKNPEFQSLPYEFSVPEG-QD 116
E G QD AT VN+ VT D ND P+F++ + VP +
Sbjct: 2403 VLDRESIGVYQLTLMAQDSSITEPRATSVNLTVTVGDTNDNVPKFEANTFNIVVPNNIRA 2462
Query: 117 GLAVGRVHATDADEGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
G V A+D DEG NA+++Y++ + F + TG IR L +K + + +F
Sbjct: 2463 GEFVFGARASDLDEGINAMIFYNISGKDQHYFEIHPTTGVIRAKSEL-MQKNKPNADVIF 2521
Query: 175 LISKFAT 181
I+ AT
Sbjct: 2522 NINIQAT 2528
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRV----HATDADEGQNAVVY 137
LS+T V + V DIND P F+ Y +V Q+ L +G + ATD D G NA +
Sbjct: 2322 LSNTGIVKVEVQDINDNGPVFELQYYHATV---QENLPIGSLVLKPVATDKDVGLNAKIR 2378
Query: 138 YSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
+++ + F +D +TG+I T LD E +Y
Sbjct: 2379 FNLLGEHMNHFHIDTDTGEISTAAVLDRESIGVY 2412
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV-- 140
S A + I V D+ND P F+ Y + E G V + ATD D G NA VYY +
Sbjct: 360 SIAHLIINVNDVNDHEPVFEKSEYSAVLSELAPTGTFVASIAATDEDTGVNAQVYYEILT 419
Query: 141 -PEDIPFVVDANTGDIRTNKALDYEKQ 166
E F +D TG + T LD E Q
Sbjct: 420 GNELKWFNIDTTTGLVVTAGPLDREMQ 446
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 68/165 (41%), Gaps = 28/165 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVE-YRLLDNNTDA-------------ASYFNLDPA----TE 71
G L+ ATD D G G+ + Y ++ N D SY +L+ E
Sbjct: 50 GTRLLLDAATDADIGDNGVTDHYEIIAGNVDNKFRLVTTTNPSGDTSYLHLETTGNLDRE 109
Query: 72 HQGPIQDEGGLSSTAT--------VNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGR 122
+G Q S T VN+ + D+ND P F Y ++ E G V +
Sbjct: 110 SRGSYQLNISASDGGTPPRLGFLQVNVTILDVNDNPPIFDHSDYSVTLNETVLPGSPVLQ 169
Query: 123 VHATDADEGQNA-VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQ 166
V A+D D G N+ + YY + F VD TG I T + L+ +Q
Sbjct: 170 VMASDNDLGDNSKLTYYLSETETQFTVDPETGVISTTERLNCPQQ 214
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 63/160 (39%), Gaps = 20/160 (12%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN------------LDPATEHQGPI- 76
G + ++ A+ G ++Y++ N A+ + LD HQ I
Sbjct: 2571 GKMIAKMSASSPKKGSIANIKYKIAGGNMGNAAVVDPNSGVLSVGPDGLDYELTHQYEIW 2630
Query: 77 -----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADE 130
D L + +NI VTD ND P + L Y V E + + + A D D
Sbjct: 2631 VAAADSDRPSLRTVTLLNINVTDANDNPPVMEKLIYNAEVLEEESPPQFIVAIKAIDKDS 2690
Query: 131 GQNAVVYYSVPEDIPFVVDAN-TGDIRTNKALDYEKQQLY 169
G N V Y + D + + N +G+I T LD E+ Y
Sbjct: 2691 GDNGEVSYLLKNDYNGIFEINSSGEIYTTMQLDREEMSDY 2730
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 80/223 (35%), Gaps = 68/223 (30%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL--DNNTDAASYFNLDPATEH 72
D + Y + + +G+ ++ V A D DSGK GL+E+ + D+N D + N +T
Sbjct: 1873 DPMSYSSEIFENVPIGMEVVTVSAKDIDSGKNGLIEFSITAGDDNNDFEIHSNGTISTRR 1932
Query: 73 QGPIQDEGGLSSTAT--------------------------------------------- 87
Q + G + T T
Sbjct: 1933 QLDREQRSGYTLTVTARDCADEMAIFSDLKESQLKLKYRSPRRFYKTHQQNQFLSHQKQE 1992
Query: 88 -------VNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYY- 138
V I V D+ND++P F S E SV E V V A D DEG+N + Y
Sbjct: 1993 RLSSTVQVTIVVKDVNDESPVFVSA-NETSVMENVAINTVVFTVKAIDNDEGRNGYIDYY 2051
Query: 139 -----------SVPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
V E +PF ++ G +R LD E + Y+
Sbjct: 2052 IDDPRTLGQTNEVVEPLPFTLNPTDGILRVADTLDREIRVNYV 2094
Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 24/139 (17%)
Query: 22 MARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE---HQGPIQD 78
+AR +H +G + +A D+D+G + Y NTD F ++ AT Q PI+
Sbjct: 782 LAR-RHAVGQEIYLSRARDRDAGVNSRLSYNFT-YNTD--QQFRINSATGVVYLQKPIRA 837
Query: 79 E-------------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
E GG LSS ++ + + D+ND P F YE S+ E
Sbjct: 838 EPETVFYVEIMATDGGNPPLSSRLSLPVHIADVNDHTPVFDHTSYETSLLETTKVNTRFF 897
Query: 122 RVHATDADEGQNAVVYYSV 140
+ A+D+D G N + Y +
Sbjct: 898 ALAASDSDLGANGRISYEI 916
>gi|38195903|gb|AAR13653.1| fat-like cadherin FATJ protein [Homo sapiens]
Length = 3222
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 83/170 (48%), Gaps = 22/170 (12%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL++Y + N + A + +
Sbjct: 1394 ATIPESHSIGSIVRTVSARDRDAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYE 1453
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGR 122
+H+ I D G ++ T +V + V D+ND +P F S Y +V E G V
Sbjct: 1454 LCQKHEMTISAIDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIH 1513
Query: 123 VHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y+V D+ FV+D NTG I T LD+E +Q Y
Sbjct: 1514 LNATDADSGTNAVIAYTVQSSDSDL-FVIDPNTGVITTQGFLDFETKQSY 1562
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F +DP + E +
Sbjct: 54 GSKIMQLTAMDADEGANALVTYTIISGADDS---FRIDPESGDLIATRRLDRERRSKYSL 110
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQ 132
D+G SS +NI V+D+ND P+F Y F +PE G V + ATD D G
Sbjct: 111 LVRADDGLQSSDMRINITVSDVNDHTPKFSRPVYSFDIPEDTIPGSLVAAILATDDDSGV 170
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG + LDYE QQ Y+ V
Sbjct: 171 NGEITYIVNEDDEDGIFFLNPITGVFNLTRLLDYEVQQYYILTV 214
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 22/167 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y ++D A+ F ++P+T
Sbjct: 1072 SQIFSAHVPENSPLGYTVTRVTTSDEDIGINAISRYSIMD----ASLPFTINPSTGDIVI 1127
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V I VTDIND P F Y PE + G
Sbjct: 1128 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNAPRFSRTSYYLDCPELTEIGS 1187
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
V +V ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 1188 KVTQVFATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQILKYQ 1234
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 24/162 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V A DKDSG G ++Y +++ N + + F+++ AT ++
Sbjct: 985 ILTVSAMDKDSGPNGQLDYEIVNGNMENS--FSINHATGEIRSVRPLDREKVSHYVLTIK 1042
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G S + +V I + D ND P F + + VPE G V RV +D D G
Sbjct: 1043 SSDKGSPSQSTSVKVMINILDENDNAPRFSQI-FSAHVPENSPLGYTVTRVTTSDEDIGI 1101
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA+ YS+ + +PF ++ +TGDI ++ L+ E Y RV
Sbjct: 1102 NAISRYSIMDASLPFTINPSTGDIVISRPLNREDTDRYRIRV 1143
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 18/155 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPIQ---- 77
T++QV A D D G + Y L N D A + LD T+ + +
Sbjct: 576 TILQVVARDDDRGSNSKLSYVLFGGNEDNAFTLSASGELGVTQSLDRETKERFVLMITAT 635
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNA 134
D G L+ T T+N+ V D+ND P F S Y ++PE G V V+A+DAD +NA
Sbjct: 636 DSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIPEDAPTGTDVLLVNASDADASKNA 695
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V+ + + F ++ +TG I T+ LD E + Y
Sbjct: 696 VIRI-IGGNSQFTINPSTGQIITSALLDRETKDNY 729
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +ATD DSG +EY LL+ + S +D G + D
Sbjct: 367 VFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATD 426
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y+ + E G + +V A D DEG N
Sbjct: 427 KGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQ 486
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y + + F +D+ TG I K LD EK Y
Sbjct: 487 VRYGIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTY 523
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 76/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 1508 GTTVIHLNATDADSGTNAVIAYTVQSSDSD---LFVIDPNT---GVITTQGFLDFETKQS 1561
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S ATVNI++ N+ P F S Y F + E G VG V A+
Sbjct: 1562 YHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFAS 1621
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F ++ TG I + LD EK+ ERV L
Sbjct: 1622 DRDLGTDGEVHYLIFGNSRKKGFQINKKTGQIYVSGILDREKE----ERVSL 1669
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 79/164 (48%), Gaps = 22/164 (13%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQG-- 74
++G L++V A D KD G VEY + LDN+T S + + +Q
Sbjct: 1295 KVGTKLIRVTAIDDKDFGLNSEVEYFISNDNHLGKFKLDNDTGWISVASSLISDLNQNFF 1354
Query: 75 ---PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D+G LSS ATV+I VT+ N PEF ++PE G V V A D
Sbjct: 1355 ITVTAKDKGNPPLSSQATVHITVTEENYHTPEFSQSHMSATIPESHSIGSIVRTVSARDR 1414
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
D N ++ YS+ E+ F ++++TG + KALDYE Q +
Sbjct: 1415 DAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYELCQKH 1458
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 27/165 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGPI--- 76
G ++QV A D D G G V Y +++ NT+ F +D P + P
Sbjct: 468 GTDIIQVFAADGDEGTNGQVRYGIVNGNTNQE--FRIDSVTGAITVAKPLDREKTPTYHL 525
Query: 77 ----QDEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDA 128
D G + T+TV+I + DIND P F+ PY +VPE L + +V A D
Sbjct: 526 TVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPENLGTLPRTILQVVARDD 585
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D G N+ + Y + ED F + A +G++ ++LD E ++ ++
Sbjct: 586 DRGSNSKLSYVLFGGNEDNAFTLSA-SGELGVTQSLDRETKERFV 629
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE--DI 144
V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++ D
Sbjct: 24 VEITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTYTIISGADD 83
Query: 145 PFVVDANTGDIRTNKALDYEKQQLY 169
F +D +GD+ + LD E++ Y
Sbjct: 84 SFRIDPESGDLIATRRLDRERRSKY 108
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 33/135 (24%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G ++ V A+D D+ K ++ R++ N S F ++P+T G I
Sbjct: 678 GTDVLLVNASDADASKNAVI--RIIGGN----SQFTINPST---GQIITSALLDRETKDN 728
Query: 77 -------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHA 125
D G LSS+ +V + VTD+ND P FQ PY +P G V V
Sbjct: 729 YTLVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSFVFAVTV 788
Query: 126 TDADEGQNAVVYYSV 140
TDAD G N+ ++YS+
Sbjct: 789 TDADIGPNSELHYSL 803
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
SS ++I V D+ND P F+ P+ + E + V A D D G N + Y +
Sbjct: 947 FSSYEKLDITVLDVNDNAPIFKEDPFISEILENLSPRKILTVSAMDKDSGPNGQLDYEIV 1006
Query: 142 E---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ F ++ TG+IR+ + LD EK Y+
Sbjct: 1007 NGNMENSFSINHATGEIRSVRPLDREKVSHYV 1038
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 55/123 (44%), Gaps = 5/123 (4%)
Query: 59 DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
++ S++NL H P +STA V+I + D+ND P F S P +PE
Sbjct: 307 ESQSFYNL-VVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLS-PKLTYIPENTPID 364
Query: 118 LAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
V + ATD D G N+ + Y++ P F + G++R LD E+ Y V
Sbjct: 365 TVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 424
Query: 176 ISK 178
K
Sbjct: 425 TDK 427
>gi|395816056|ref|XP_003781529.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16 [Otolemur
garnettii]
Length = 3374
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 83/162 (51%), Gaps = 28/162 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGP- 75
G +++V A D D G G V Y L +F++DP + E Q
Sbjct: 565 GSFVVRVTARDPDQGTNGQVTYSLAPGAH--THWFSIDPTSGIITTSALLDYELEPQPQL 622
Query: 76 --IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ +GGL SS+ATV++ + D+ND P+FQ Y S+PEG Q G +V ATDAD
Sbjct: 623 IVVAMDGGLPPLSSSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDAD 682
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEK 165
G ++ YS+ + PF +D+++GD+ T + LD+++
Sbjct: 683 SGPFGLLSYSLGAGLGASGSPPFRIDSHSGDVCTTRTLDHDQ 724
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 77/177 (43%), Gaps = 27/177 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + R+ G +L+ ++ATD D G G V Y + F+LDP T
Sbjct: 1730 YSVLLRENSPPGTSLLTLRATDPDLGANGQVTYGGVSGEN-----FSLDPDTGVLTTLRA 1784
Query: 71 ---EHQGPI------QDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQDGLA 119
E Q I +D G V +RV D ND P F S VPEGQD
Sbjct: 1785 LDREEQEEINLTVYARDRGSPPQLTHVTVRVAVEDENDHTPTFGSAHLSLEVPEGQDPQT 1844
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ + A+D D G N + Y + + P FV+D ++G+ T + LD E + + R+
Sbjct: 1845 LTVLRASDPDMGANGQLQYRILDGDPSGAFVLDLDSGEFGTMRPLDREVEPAFQLRI 1901
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 21/147 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNT--DAASYFNLDPAT-----------EHQGPI 76
G + + A D D+G FG + Y LL+ + F L+ +T EH G
Sbjct: 2798 GTLVTTLHAIDGDAGAFGRLHYSLLEAGPGPEGREAFALNSSTGELRARVPFDYEHTGSF 2857
Query: 77 Q------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ D G LS++ TV++ VT ++ +P F + + F VPEG Q G ++G V ATD D
Sbjct: 2858 RLLVGATDAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQVPEGAQRGHSLGHVQATDED 2917
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDI 155
G + +V YS+ P F ++ TG +
Sbjct: 2918 GGADGLVLYSLATSSPYFGINQTTGAL 2944
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD---------------PATEHQGPI 76
TL ++A+D D G G ++YR+LD + A +LD PA + +
Sbjct: 1844 TLTVLRASDPDMGANGQLQYRILDGDPSGAFVLDLDSGEFGTMRPLDREVEPAFQLRIEA 1903
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQN 133
+D G LS+T V + V D ND P F Y VPE G + ++ A D D G N
Sbjct: 1904 RDGGQPALSATLLVTVTVLDANDHAPAFPVPTYSVEVPEDVPAGTLLLQLQAHDPDAGAN 1963
Query: 134 AVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSYL 184
V Y + F+++ ++G++RT ALD E+ Y V + A L
Sbjct: 1964 GRVTYYLGTGTAGAFLLEPSSGELRTAIALDREQCPSYTFSVSAVDGAAAGPL 2016
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 64/146 (43%), Gaps = 26/146 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY--------------RLLDNNTDAASY 63
FY A + + G +QV ATD DSG FGL+ Y R+ ++ D +
Sbjct: 658 FYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGASGSPPFRIDSHSGDVCTT 717
Query: 64 FNLDPATEHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEG 114
LD QGP D GGL S V + V+D ND P+F Y S+ +
Sbjct: 718 RTLD---HDQGPSSFDFTVTAVDGGGLKSMVYVKVFVSDENDNPPQFYPREYAASLSAQS 774
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV 140
G AV RV A D D+G + + Y +
Sbjct: 775 TPGTAVLRVRAHDPDQGPHGRLSYHI 800
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 73/162 (45%), Gaps = 28/162 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQ 73
+G L+ V+A+D D G GLV + L ++ D + F LD ++ HQ
Sbjct: 2693 VGAELLHVEASDADPGPHGLVRFTL--SSGDPSGLFELDESSGTLRLAHSLDCETQARHQ 2750
Query: 74 GPIQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
+Q G + A V I V D+ND P F S+ E Q G V +HA D D
Sbjct: 2751 LVVQAADPAGAHFALAPVTIEVQDVNDHGPAFPLNLLSTSLAENQPPGTLVTTLHAIDGD 2810
Query: 130 EGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYE 164
G ++YS+ E P F ++++TG++R DYE
Sbjct: 2811 AGAFGRLHYSLLEAGPGPEGREAFALNSSTGELRARVPFDYE 2852
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 67/158 (42%), Gaps = 30/158 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPI--- 76
G L+Q++A D D+G G V Y L T A F L+P++ Q P
Sbjct: 1947 GTLLLQLQAHDPDAGANGRVTYYL---GTGTAGAFLLEPSSGELRTAIALDREQCPSYTF 2003
Query: 77 -------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-----GQDGLAVGRVH 124
G LS+T V I V D+ND P F + P +P L + +
Sbjct: 2004 SVSAVDGAAAGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGPILSTPTLPLATLR 2063
Query: 125 ATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKA 160
A D D G NA + Y + P +VD+ TG+IR ++
Sbjct: 2064 AEDRDAGANASILYRLAGTPPPGTIVDSYTGEIRVARS 2101
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A ++I + DIND P F Y V E G V +V A+DAD G N V Y +
Sbjct: 315 ALLDITLLDINDHAPAFNQSRYHAVVSESLAPGSPVLQVFASDADAGANGAVTYEINRRQ 374
Query: 143 ---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D PF +DA+TG +R + LD+E+++++
Sbjct: 375 SEGDGPFSIDAHTGLLRLERPLDFEQRRVH 404
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 78/179 (43%), Gaps = 32/179 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-- 76
Y A + G +++V+A D D G G + Y +L N+ F LD EH G +
Sbjct: 766 YAASLSAQSTPGTAVLRVRAHDPDQGPHGRLSYHILAGNS--PPLFTLD---EHSGLVTV 820
Query: 77 ------------------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
QD GGL + +A VNI + P F+ L Y FSVPE
Sbjct: 821 AWPLVRRANSVVQLEIGAQDGGGLQAEPSARVNISIVPGTPTPPVFEQLQYVFSVPEDIA 880
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
G +VG V A + G+ A V ++ P F +D+ +G ++T + LD E LE
Sbjct: 881 PGTSVGIVQARNP-PGRLAPVTLALSGGDPQGLFSLDSASGLLQTLRPLDRELLGPVLE 938
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY 138
G + TATV + + + ND +P P +V E Q G +VGR+ ATD D G N + Y
Sbjct: 1159 GQQTGTATVRVSILNQNDHSPRLSEDPTFLAVAENQPPGTSVGRIFATDRDSGPNGRLTY 1218
Query: 139 SVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
S+ + F + TG++ T + LD E+Q Y
Sbjct: 1219 SLQQLSEDSKAFRIHPQTGEMTTLQILDREQQSSY 1253
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 9/164 (5%)
Query: 5 PIPSALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF 64
P P AL + + L G AR + L +G +V R LD A
Sbjct: 1636 PGPVALHVVARDLDLGEAARVSYRLAAGGDGHFRLHSSTGALSVV--RPLDREQQAEHIL 1693
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRV 123
+ A++H P + S+T + I V D+ND+ P FQ Y + E G ++ +
Sbjct: 1694 TVV-ASDHGSPPR-----SATQVLTISVADVNDEAPAFQQQEYSVLLRENSPPGTSLLTL 1747
Query: 124 HATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQ 167
ATD D G N V Y F +D +TG + T +ALD E+Q+
Sbjct: 1748 RATDPDLGANGQVTYGGVSGENFSLDPDTGVLTTLRALDREEQE 1791
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 80/171 (46%), Gaps = 33/171 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G ++ ++ ATD+DSG G + Y L + D+ + F + P T E Q
Sbjct: 1197 GTSVGRIFATDRDSGPNGRLTYSLQQLSEDSKA-FRIHPQTGEMTTLQILDREQQSSYQL 1255
Query: 76 ---IQDEGG--LSSTATVNIRVTDINDKNPEF--------QSLPYEFSVPEG-QDGLAVG 121
+QD G S+T TV+I V D+ND +P F LP + VP+ G V
Sbjct: 1256 LVQVQDAGNPPRSTTGTVHIAVLDLNDNSPTFLQASGAAGGGLPIQ--VPDRVSPGTLVT 1313
Query: 122 RVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ A D DEG+N V Y++ P F + ++G++ T L E++ Y+
Sbjct: 1314 TLQAKDPDEGENGTVLYTLTGPGSELFSLHPHSGELLTAAPLIREERPHYV 1364
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 72/178 (40%), Gaps = 40/178 (22%)
Query: 30 GVTLMQVKATDKDSGK-FGLVEYRLLDNNTDAASYFNLDP----ATEHQGPIQDEGGL-- 82
G TL+ ++ATD D + V+Y ++ N F L+P A E GP G
Sbjct: 2574 GSTLLTLEATDADGSRTHAAVDYSIISGNR--GRVFQLEPRLAEAGEGVGPGPQALGCLV 2631
Query: 83 ---------------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
SS V + + D+ND P F Y +VPE
Sbjct: 2632 LLEPLDFESLTQYNLTVAAADRGQPPRSSAVPVTVTILDVNDNPPVFTQASYRVAVPEDT 2691
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
G + V A+DAD G + +V +++ P F +D ++G +R +LD E Q +
Sbjct: 2692 PVGAELLHVEASDADPGPHGLVRFTLSSGDPSGLFELDESSGTLRLAHSLDCETQARH 2749
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 28/135 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------------ATEHQGP-- 75
G ++ V ATD+DSG G + Y L A+ F++DP A +H+GP
Sbjct: 2468 GSAIISVSATDRDSGANGHISYHL----ASPAAGFSVDPNNGTLFTTVETVALDHEGPGV 2523
Query: 76 ------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHAT 126
+D G G ++ A V++++ D ND P F Y +V E G + + AT
Sbjct: 2524 VDVVLEARDHGAPGRAAQAMVHVQLQDQNDHAPSFTLPHYRVAVTEDLPPGSTLLTLEAT 2583
Query: 127 DADEGQ-NAVVYYSV 140
DAD + +A V YS+
Sbjct: 2584 DADGSRTHAAVDYSI 2598
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 70/180 (38%), Gaps = 39/180 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + L L+QV+A D D G G + Y L + A F++DP
Sbjct: 2252 YVAFLPESRPLEGPLLQVEADDLDQGSGGQISYSLAASQP-ARGLFHVDPATGTITTTAI 2310
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
AT+ P L +AT+ + V D ND P P+E V E
Sbjct: 2311 LDREIWAETRLVLMATDRGSP-----SLVGSATLTVMVIDTNDNRPTIPQ-PWELRVSED 2364
Query: 114 GQDGLAVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + +V D D G V++Y S P+D PF V G + LD+E+ Y
Sbjct: 2365 ALLGSEIAQVTGNDVDSG--PVLWYVLSPSGPQD-PFSVGRYGGRVSLTGPLDFEQCSRY 2421
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 15/93 (16%)
Query: 82 LSSTATVNIRVTDINDKNPEF-------QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
L + A + VTD+ND P F + LP E ++P G V RV A D D+G N
Sbjct: 528 LRAEAAFVLHVTDVNDNAPAFDRQLYRPEPLP-EVALP----GSFVVRVTARDPDQGTNG 582
Query: 135 VVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
V YS+ F +D +G I T+ LDYE
Sbjct: 583 QVTYSLAPGAHTHWFSIDPTSGIITTSALLDYE 615
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 71/172 (41%), Gaps = 29/172 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH----------QGPI--- 76
G + ++A D DSG V + LL A F +DP T H GP+
Sbjct: 986 GTPIYTLRALDPDSGVNSRVTFTLLGGGGGA---FTVDPTTGHVRLMELLGPPGGPVHEL 1042
Query: 77 ----QDEGGLSSTATVNIRVT--DINDKN--PEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
+D G T+ +RV D+ P F+S Y +P G G V ++ A
Sbjct: 1043 ELEARDGGSPPRTSHFRLRVVVQDLGTHGLAPRFESPIYRVDLPSGTTPGTQVLQLQAQA 1102
Query: 128 ADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D + + Y+ E PF ++ +G + ALD E Q+LY +V +S
Sbjct: 1103 PD--GSPITYHLAAEGTSSPFGLEPQSGWLWVRAALDREAQELYTLKVMAVS 1152
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD-EGQNAVVYYSVPEDIP 145
V +RV D N+ P F P ++PE + G A+ A+DAD G N+ V Y + P
Sbjct: 1498 VQVRVQDENEHAPTFSRDPLALALPENPEPGAALYTFRASDADGPGPNSDVRYRLLRQEP 1557
Query: 146 FV----VDANTGDIRTNKALDYEKQQLYL 170
V +DA TG + + LD E L
Sbjct: 1558 PVPALRLDARTGALSAPRGLDRETTPALL 1586
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 45/98 (45%), Gaps = 11/98 (11%)
Query: 72 HQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE 130
H GP EG A + + V D+ND P F Y+ ++ E G A+ V ATD D
Sbjct: 2428 HDGP--HEG----CANLTVLVEDVNDNAPAFSQSLYQVTLLEHTPPGSAIISVSATDRDS 2481
Query: 131 GQNAVVYYSVPEDIP-FVVDANTGDIRT---NKALDYE 164
G N + Y + F VD N G + T ALD+E
Sbjct: 2482 GANGHISYHLASPAAGFSVDPNNGTLFTTVETVALDHE 2519
>gi|345323888|ref|XP_001505394.2| PREDICTED: cadherin-19-like [Ornithorhynchus anatinus]
Length = 475
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 84/176 (47%), Gaps = 29/176 (16%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT--------------------- 70
+++QV A D D +G RLL + YF+++P T
Sbjct: 230 SVIQVTARDDDDPSYG-NSARLLYSILHGQPYFSVEPTTGVIRISSQMDRETKDQYLVII 288
Query: 71 EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
+ + + GGLS T TV I ++D+ND P FQ Y +V E G ++G V A D+D
Sbjct: 289 QAKDMVGQMGGLSGTTTVIINLSDVNDNMPLFQQKLYHMTVSESAAIGTSIGVVMADDSD 348
Query: 130 EGQNAVVYYSVPED----IPFVVDANT--GDIRTNKALDYEKQQLYLERVFLISKF 179
G+NA V Y + ED ++D T G + K LDYE+Q+ Y R +I+++
Sbjct: 349 IGENAEVIYLIEEDGSHAFDIIIDNETQEGIVILKKKLDYERQRHYSIRAQVINRY 404
>gi|306922625|gb|ADN07503.1| cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog)
[Microtus ochrogaster]
Length = 3310
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 57/176 (32%), Positives = 85/176 (48%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQ--GP 75
Y A R+ +++V ATD+D GLV Y ++ N+ +F +D T E Q P
Sbjct: 545 YVAQVREDVRPHTVVLRVTATDQDKDANGLVHYNIISGNSRG--HFAIDSLTGEIQVVAP 602
Query: 76 I--------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ QD G ++T +I+V DIND P F S P++ SV E G
Sbjct: 603 LDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLENAPLG 662
Query: 118 LAVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+V + A DAD G+N+ + YS V D PFV+++ TG + + LD E + Y
Sbjct: 663 HSVIHIQAVDADHGENSRLEYSLTGVAPDTPFVINSATGWVSVSGPLDRESVEHYF 718
Score = 60.1 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQG 74
+++Q+ ATD+D+ G V+Y N D F ++P + E
Sbjct: 974 SVLQISATDRDAHANGRVQYTF-QNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTA 1032
Query: 75 PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G L + ++ + V D+ND P F + +E V E G V ++ A D DEG
Sbjct: 1033 YAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDEG 1092
Query: 132 QNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE +Q Y+
Sbjct: 1093 PNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYV 1134
Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 55/185 (29%), Positives = 86/185 (46%), Gaps = 32/185 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN---NTDAASYFNLDPAT----- 70
Y R+ E G ++Q++ATD D+ + YR + + +AA+ F +DP +
Sbjct: 433 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGSPAARKEAAAAFEIDPRSGLIST 492
Query: 71 ------EH------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH QG Q+ G S+T V+I V D ND P+F Y V
Sbjct: 493 SGRVDREHMESYELVVEASDQG--QEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVR 550
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E + V RV ATD D+ N +V+Y++ F +D+ TG+I+ LD+E ++
Sbjct: 551 EDVRPHTVVLRVTATDQDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVVAPLDFEAERE 610
Query: 169 YLERV 173
Y R+
Sbjct: 611 YALRI 615
Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V+I +TD N P FQS Y S+ E + G V + A+D D G+NA + Y + +++P
Sbjct: 839 VHINITDANTHRPVFQSAHYSVSMNEDRPVGSTVVVISASDDDVGENARITYLLEDNLPQ 898
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DA++G I LDYE Q Y
Sbjct: 899 FRIDADSGAITLQAPLDYEDQVTY 922
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 29/180 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT------- 70
Y + + G ++++V A D D G+ G + Y L N+ + F++DP +
Sbjct: 325 YQTLVPENEAAGTSVLRVVAQDPDPGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 384
Query: 71 --------EH--QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
H + QD G LS+T V + V D ND P F+ Y ++ E ++G
Sbjct: 385 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRENVEEG 444
Query: 118 LAVGRVHATDADEGQNAVVYY--------SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ ++ ATD D NA + Y F +D +G I T+ +D E + Y
Sbjct: 445 YPILQLRATDGDAPPNANLRYRFVGSPAARKEAAAAFEIDPRSGLISTSGRVDREHMESY 504
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEH 72
S Y + +G T++ + A+D D G+ + Y L DN F +D A
Sbjct: 855 SAHYSVSMNEDRPVGSTVVVISASDDDVGENARITYLLEDN----LPQFRIDADSGAITL 910
Query: 73 QGPIQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQD 116
Q P+ E ++ T + R V D+ND P+F + Y V E
Sbjct: 911 QAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAP 970
Query: 117 GL-AVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ++ ATD D N V Y+ D F ++ +G +RT + LD E +Y
Sbjct: 971 PFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVY 1028
Score = 42.4 bits (98), Expect = 0.074, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 69/176 (39%), Gaps = 28/176 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI--------- 76
LG +++ ++A D D G+ +EY L D F ++ AT GP+
Sbjct: 661 LGHSVIHIQAVDADHGENSRLEYSLTGVAPDTP--FVINSATGWVSVSGPLDRESVEHYF 718
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDAD 129
+D G LS++A+V + V D+ND PEF Y + E + V T D
Sbjct: 719 FGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNE-DAAVGTSVVSVTAVD 777
Query: 130 EGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
N+ + Y + G + LDY KQ+ Y + V S A
Sbjct: 778 RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLDY-KQERYFKLVLTASDRA 832
Score = 41.2 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVD 149
+++P+F Y+ VPE + G +V RV A D D G+ + YS+ + F +D
Sbjct: 315 NRHPQFPQYNYQTLVPENEAAGTSVLRVVAQDPDPGEAGRLVYSLAALMNSRSLELFSID 374
Query: 150 ANTGDIRTNKALDYEKQQLYLERV 173
+G IRT ALD E + + RV
Sbjct: 375 PQSGLIRTAAALDRESMERHYLRV 398
Score = 37.4 bits (85), Expect = 2.4, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 20/154 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPI- 76
+G + Q+ A D D G + Y++++ N + + +LD + I
Sbjct: 1077 VGSVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIV 1136
Query: 77 --QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFS--VPEGQDGLA---VGRVHATDAD 129
L S ATV++R+ D ND +P + F+ V D +GR+ A D D
Sbjct: 1137 VQATSAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPD 1196
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALD 162
+ + ++ VV+ +G++R ++ LD
Sbjct: 1197 VSDHLFYSFERGNELQLLVVNQTSGELRLSRKLD 1230
>gi|432857205|ref|XP_004068581.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
[Oryzias latipes]
Length = 2980
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 86/182 (47%), Gaps = 30/182 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--------------------- 57
Y R+ E+G ++ V+ATD D+ G + Y +L++N
Sbjct: 376 YKESIRENLEIGYEVLTVRATDGDAPANGNILYHILNSNGSNDVFEIDSRSGVIRTKGLV 435
Query: 58 --TDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
+ +YF L A + QG +D G S+TATV+I V D ND P+F Y +PE +
Sbjct: 436 DREELEAYFLLVEAND-QG--RDPGPRSATATVHILVEDDNDNAPQFSEKRYVVQIPEDK 492
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
+ ++ ATD D G NAVV++S+ F +DA TG + LDYE + Y
Sbjct: 493 TPNTEILQLTATDKDRGSNAVVHFSIMSGNTRGQFYIDAQTGKMDLVSYLDYEANKEYTL 552
Query: 172 RV 173
R+
Sbjct: 553 RI 554
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 22/159 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNT-------------DAASYFNLDPATEHQGPIQDE 79
++Q+ ATDKD G +V + ++ NT D SY + + E+ I+ +
Sbjct: 498 ILQLTATDKDRGSNAVVHFSIMSGNTRGQFYIDAQTGKMDLVSYLDYEANKEYTLRIRAQ 557
Query: 80 GG----LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
G LS+ + V ++V D+ND P F S P++ +V E G ++ + A DAD G+N
Sbjct: 558 DGGRPPLSNISGLVTVQVLDVNDNAPIFVSTPFQATVLENVPLGYSIIHIQAVDADSGEN 617
Query: 134 AVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
+ + Y + E PF ++ +TG I LD E Y
Sbjct: 618 SRLEYQLTETTPHFPFSINNSTGWIVVAAELDRESVDFY 656
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 77/161 (47%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLL---DNNTD---------AASYFNLD----PATEHQGP 75
+++QV A D+DSG G V Y D + D + LD P Q
Sbjct: 913 SVVQVSAIDRDSGLNGRVFYTFQGGEDGDGDFIIESTSGIVRTLRRLDRENVPVYNLQAF 972
Query: 76 IQDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G + VNI VT D+ND P F+ ++ V E GL VG + ATD DEG
Sbjct: 973 AVDKGVPALKTPVNIHVTILDVNDNPPVFEKDEFDIMVEENSPIGLVVGHISATDPDEGS 1032
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F++D +G++ LDYE + Y+
Sbjct: 1033 NAQIMYQIVEGNIPEVFMLDIFSGELTALIDLDYESRPEYV 1073
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY 137
+G L TA V + VTD N P FQS Y ++ E + G V + ATD D G+NA +
Sbjct: 769 DGTLFDTAQVYVNVTDANTHRPVFQSSHYTVNINEDRPLGTTVVVISATDEDIGENARIT 828
Query: 138 YSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
Y + +++P F +D++TG + T LDYE Q Y
Sbjct: 829 YFMDDNVPQFDIDSDTGAVTTQMELDYEDQLSY 861
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 31/181 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY---RLLDNNTDAASYFNLDPATEHQG 74
Y + G ++Q+KA D D G G +EY L D+ ++ + F +DPA+
Sbjct: 267 MYQVSVAENQPAGTAVVQLKAVDVDEGDAGRLEYFIEALFDSRSN--NLFAVDPASGAVT 324
Query: 75 PIQ-----------------DEGGLSSTA--TVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
++ D G TA T+ + V+D ND +P F+ Y+ S+ E
Sbjct: 325 TVEVLDRETKDTHVFRVTAVDHGSPRRTAMATLTVTVSDTNDHDPVFEQQDYKESIRENL 384
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSV-----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ G V V ATD D N + Y + D+ F +D+ +G IRT +D E+ + Y
Sbjct: 385 EIGYEVLTVRATDGDAPANGNILYHILNSNGSNDV-FEIDSRSGVIRTKGLVDREELEAY 443
Query: 170 L 170
Sbjct: 444 F 444
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 28/174 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSST 85
LG T++ + ATD+D G+ + Y + DN F++D A Q + E LS T
Sbjct: 807 LGTTVVVISATDEDIGENARITYFMDDN----VPQFDIDSDTGAVTTQMELDYEDQLSYT 862
Query: 86 ATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDA 128
+ R V D+ND +P F Y SV E +V +V A D
Sbjct: 863 LAITARDNGIPQKSDTTYLEILVNDVNDNSPRFLRDHYVGSVMEDVPVFTSVVQVSAIDR 922
Query: 129 DEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
D G N V+Y+ D F++++ +G +RT + LD E +Y + F + K
Sbjct: 923 DSGLNGRVFYTFQGGEDGDGDFIIESTSGIVRTLRRLDRENVPVYNLQAFAVDK 976
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 79/173 (45%), Gaps = 35/173 (20%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNT-----------DAASYFNLD 67
LG +++ ++A D DSG+ +EY+L ++N+T ++ ++N
Sbjct: 600 LGYSIIHIQAVDADSGENSRLEYQLTETTPHFPFSINNSTGWIVVAAELDRESVDFYNFG 659
Query: 68 -PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHA 125
A +H P+ +SS+A++++ + D+ND NPEF Y + E G +V V A
Sbjct: 660 VEARDHGYPV-----MSSSASISMTILDVNDNNPEFTQKAYYMRLNEDAAVGTSVVTVSA 714
Query: 126 TDADEGQNAVVYYSVPED-----IPFVVDANTGDIRTNKALDYEKQQLYLERV 173
D D N+VV Y + + G I LDY+ ++ Y+ V
Sbjct: 715 VDQD--INSVVTYQISSGNTRNRFSITSQSGGGLITLALPLDYKLERQYVLTV 765
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 73/167 (43%), Gaps = 20/167 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLD 67
+ M + +G+ + + ATD D G + Y++++ N + + +LD
Sbjct: 1006 FDIMVEENSPIGLVVGHISATDPDEGSNAQIMYQIVEGNIPEVFMLDIFSGELTALIDLD 1065
Query: 68 PATEHQGPI---QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFS--VPEGQDGL---A 119
+ + I L S ATV+I++ D ND P ++ F+ V +
Sbjct: 1066 YESRPEYVIVVQATSAPLVSRATVHIKLVDKNDNLPMLKNFQIIFNNYVTDKSSSFPTEV 1125
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
+GR+ A D D + V ++ V ++ +TG+I+ ++AL+ +
Sbjct: 1126 IGRIPAHDPDVSDQLHYSFDVGNELNLVLLNQSTGEIQLSQALNNNR 1172
>gi|306922617|gb|ADN07496.1| cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog),
5 prime [Microtus ochrogaster]
Length = 3301
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 57/176 (32%), Positives = 85/176 (48%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQ--GP 75
Y A R+ +++V ATD+D GLV Y ++ N+ +F +D T E Q P
Sbjct: 545 YVAQVREDVRPHTVVLRVTATDQDKDANGLVHYNIISGNSRG--HFAIDSLTGEIQVVAP 602
Query: 76 I--------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ QD G ++T +I+V DIND P F S P++ SV E G
Sbjct: 603 LDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLENAPLG 662
Query: 118 LAVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+V + A DAD G+N+ + YS V D PFV+++ TG + + LD E + Y
Sbjct: 663 HSVIHIQAVDADHGENSRLEYSLTGVAPDTPFVINSATGWVSVSGPLDRESVEHYF 718
Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQG 74
+++Q+ ATD+D+ G V+Y N D F ++P + E
Sbjct: 974 SVLQISATDRDAHANGRVQYTF-QNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTA 1032
Query: 75 PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G L + ++ + + D+ND P F + +E V E G V ++ A D DEG
Sbjct: 1033 YAVDRGVPPLRTPVSIQVTIQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDEG 1092
Query: 132 QNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE +Q Y+
Sbjct: 1093 PNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYV 1134
Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 55/185 (29%), Positives = 86/185 (46%), Gaps = 32/185 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN---NTDAASYFNLDPAT----- 70
Y R+ E G ++Q++ATD D+ + YR + + +AA+ F +DP +
Sbjct: 433 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGSPAARKEAAAAFEIDPRSGLIST 492
Query: 71 ------EH------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH QG Q+ G S+T V+I V D ND P+F Y V
Sbjct: 493 SGRVDREHMESYELVVEASDQG--QEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVR 550
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E + V RV ATD D+ N +V+Y++ F +D+ TG+I+ LD+E ++
Sbjct: 551 EDVRPHTVVLRVTATDQDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVVAPLDFEAERE 610
Query: 169 YLERV 173
Y R+
Sbjct: 611 YALRI 615
Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V+I +TD N P FQS Y S+ E + G V + A+D D G+NA + Y + +++P
Sbjct: 839 VHINITDANTHRPVFQSAHYSVSMNEDRPVGSTVVVISASDDDVGENARITYLLEDNLPQ 898
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DA++G I LDYE Q Y
Sbjct: 899 FRIDADSGAITLQAPLDYEDQVTY 922
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 29/180 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT------- 70
Y + + G ++++V A D D G+ G + Y L N+ + F++DP +
Sbjct: 325 YQTLVPENEAAGTSVLRVVAQDPDPGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 384
Query: 71 --------EH--QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
H + QD G LS+T V + V D ND P F+ Y ++ E ++G
Sbjct: 385 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRENVEEG 444
Query: 118 LAVGRVHATDADEGQNAVVYY--------SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ ++ ATD D NA + Y F +D +G I T+ +D E + Y
Sbjct: 445 YPILQLRATDGDAPPNANLRYRFVGSPAARKEAAAAFEIDPRSGLISTSGRVDREHMESY 504
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEH 72
S Y + +G T++ + A+D D G+ + Y L DN F +D A
Sbjct: 855 SAHYSVSMNEDRPVGSTVVVISASDDDVGENARITYLLEDN----LPQFRIDADSGAITL 910
Query: 73 QGPIQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQD 116
Q P+ E ++ T + R V D+ND P+F + Y V E
Sbjct: 911 QAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAP 970
Query: 117 GL-AVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ++ ATD D N V Y+ D F ++ +G +RT + LD E +Y
Sbjct: 971 PFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVY 1028
Score = 42.4 bits (98), Expect = 0.074, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 69/176 (39%), Gaps = 28/176 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI--------- 76
LG +++ ++A D D G+ +EY L D F ++ AT GP+
Sbjct: 661 LGHSVIHIQAVDADHGENSRLEYSLTGVAPDTP--FVINSATGWVSVSGPLDRESVEHYF 718
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDAD 129
+D G LS++A+V + V D+ND PEF Y + E + V T D
Sbjct: 719 FGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNE-DAAVGTSVVSVTAVD 777
Query: 130 EGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
N+ + Y + G + LDY KQ+ Y + V S A
Sbjct: 778 RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLDY-KQERYFKLVLTASDRA 832
Score = 41.2 bits (95), Expect = 0.18, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVD 149
+++P+F Y+ VPE + G +V RV A D D G+ + YS+ + F +D
Sbjct: 315 NRHPQFPQYNYQTLVPENEAAGTSVLRVVAQDPDPGEAGRLVYSLAALMNSRSLELFSID 374
Query: 150 ANTGDIRTNKALDYEKQQLYLERV 173
+G IRT ALD E + + RV
Sbjct: 375 PQSGLIRTAAALDRESMERHYLRV 398
Score = 37.4 bits (85), Expect = 2.4, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 20/154 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPI- 76
+G + Q+ A D D G + Y++++ N + + +LD + I
Sbjct: 1077 VGSVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIV 1136
Query: 77 --QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFS--VPEGQDGLA---VGRVHATDAD 129
L S ATV++R+ D ND +P + F+ V D +GR+ A D D
Sbjct: 1137 VQATSAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPD 1196
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALD 162
+ + ++ VV+ +G++R ++ LD
Sbjct: 1197 VSDHLFYSFERGNELQLLVVNQTSGELRLSRKLD 1230
>gi|395535535|ref|XP_003769780.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2
[Sarcophilus harrisii]
Length = 2694
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 83/181 (45%), Gaps = 26/181 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-NTDAASYFNLDPAT---EHQG 74
Y R+ E+G ++ V+ATD D+ + YRL++ F +DP + +G
Sbjct: 314 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLVEGPGGPPPEVFEIDPRSGVIRTRG 373
Query: 75 PI------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D G S+TATV + V D ND P+F Y V E
Sbjct: 374 PVDREAVESYQLTVEASDQGRDPGPRSATATVCLSVEDDNDNAPQFSEKRYVVQVREDVT 433
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLER 172
G V RV ATD D+G NA+V+YS+ F +DA TG + LDYE + Y R
Sbjct: 434 PGAPVLRVTATDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETAKEYTLR 493
Query: 173 V 173
+
Sbjct: 494 I 494
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-------------DAASYFN 65
Y R+ G +++V ATD+D G LV Y ++ N D S +
Sbjct: 424 YVVQVREDVTPGAPVLRVTATDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 483
Query: 66 LDPATEHQGPIQDEGG----LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
+ A E+ I+ + G LS+ + V ++V DIND P F S P++ +V E G
Sbjct: 484 YETAKEYTLRIRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 543
Query: 120 VGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V + A DAD G NA + Y V D PF ++ TG I LD E+ Y
Sbjct: 544 VLHIQAIDADAGDNARLEYRLAGVGPDFPFTINNGTGWISVAAELDREEVDFY 596
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 81/183 (44%), Gaps = 31/183 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPATE- 71
S Y A + +G + ++A D D G+ G +EY L D+ ++ +F+LDP T
Sbjct: 203 SPVYQATVPENQPVGTPVASLRAVDPDEGEAGRLEYTMDALFDSRSN--QFFSLDPVTGA 260
Query: 72 ----------------HQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
+ QD G S+ AT+ I VTD ND NP F+ Y+ S+ E
Sbjct: 261 VTTAEELDRETKSTHVFRVTAQDHGTPRRSALATLTITVTDTNDHNPVFEQSEYKESLRE 320
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYSV------PEDIPFVVDANTGDIRTNKALDYEKQ 166
+ G V V ATD D NA + Y + P F +D +G IRT +D E
Sbjct: 321 NLEVGYEVLTVRATDGDAPPNANILYRLVEGPGGPPPEVFEIDPRSGVIRTRGPVDREAV 380
Query: 167 QLY 169
+ Y
Sbjct: 381 ESY 383
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLDPATEHQGPIQ-- 77
+++Q+ ATD+DSG G V Y + + LD Q ++
Sbjct: 824 SVLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAF 883
Query: 78 --DEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G + V + VT D+ND P F+ ++ V E GLAV RV ATD DEG
Sbjct: 884 AVDKGVPPARTPVEVMVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGT 943
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 944 NAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYETRAEYV 984
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDADEGQNAVVYYSV- 140
S T + I V D+ND P+F Y+ S+ E +V ++ ATD D G N V+Y+
Sbjct: 787 SDTTYLEILVNDVNDNAPQFLRESYQGSIYEDVPPFTSVLQISATDRDSGLNGRVFYTFQ 846
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
D F+V++ +G +RT + LD E Y+ R F + K
Sbjct: 847 GGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAFAVDK 887
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPAT--EHQGP 75
+G+ + +V ATD D G + Y++++ N + + +LD T E+
Sbjct: 927 IGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYETRAEYVLV 986
Query: 76 IQDEGG-LSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRVHA 125
IQ L S ATV++R+ D ND P + F S P G A+GRV A
Sbjct: 987 IQATSAPLVSRATVHVRLLDRNDNPPVLGNFEILFNNYVTNRSSSFPGG----AIGRVPA 1042
Query: 126 TDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D D + ++ V ++ +TG++R +KALD + LE + +S
Sbjct: 1043 HDPDVSDTLSYSFERGNELSLVLLNTSTGELRLSKALDNNRP---LEAIMSVS 1092
Score = 39.3 bits (90), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 100 PEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV------PEDIPFVVDANT 152
P+FQS Y+ +VPE Q G V + A D DEG+ + Y++ + F +D T
Sbjct: 199 PQFQSPVYQATVPENQPVGTPVASLRAVDPDEGEAGRLEYTMDALFDSRSNQFFSLDPVT 258
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G + T + LD E + ++ RV
Sbjct: 259 GAVTTAEELDRETKSTHVFRV 279
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 37/171 (21%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASY-------------FN 65
LG ++ ++A D D+G +EYRL ++N T S F
Sbjct: 540 LGYLVLHIQAIDADAGDNARLEYRLAGVGPDFPFTINNGTGWISVAAELDREEVDFYSFG 599
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
++ A +H P L+++A+V++ + D+ND NP F Y + E G +V V
Sbjct: 600 VE-ARDHGTPP-----LTASASVSVTILDVNDNNPTFTQPEYAVRLNEDAAVGTSVVTVS 653
Query: 125 ATDADEGQNAVVYYSVPED-----IPFVVDANTGDIRTNKALDYEKQQLYL 170
A D D ++V+ Y + + G I LDY+ ++ Y+
Sbjct: 654 AVDRDA--HSVITYQIASGNTRNRFSITSQSGGGLISLALPLDYKLERQYV 702
>gi|297293336|ref|XP_002804232.1| PREDICTED: protocadherin Fat 4-like isoform 1 [Macaca mulatta]
Length = 4981
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 83/170 (48%), Gaps = 22/170 (12%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL++Y + N + A + +
Sbjct: 3096 ATIPESHSVGSIVRTVSARDRDAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYE 3155
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
+H+ I D G ++ T +V + V D+ND +P F S Y +V E G V
Sbjct: 3156 LCQKHEMTISAIDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIH 3215
Query: 123 VHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y+V D+ FVVD NTG I T LD+E +Q Y
Sbjct: 3216 LNATDADSGTNAVIAYTVQSSDSDL-FVVDPNTGVITTQGFLDFETKQSY 3264
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F +DP + E +
Sbjct: 1756 GSKIMQLTAMDADEGANALVTYTIISGADDS---FRIDPESGDLIATRRLDRERRSKYSL 1812
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQ 132
D+G SS +NI V+D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1813 LVRADDGLQSSDMRINITVSDVNDHTPKFSRPMYSFDIPEDTIPGSLVAAILATDDDSGV 1872
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG + LDYE QQ Y+ V
Sbjct: 1873 NGEITYIVNEDDEDGIFFLNPITGVFNLTRVLDYEVQQYYILTV 1916
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 24/162 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V A DKDSG G ++Y +++ N + + FN++ AT ++
Sbjct: 2687 ILTVSAVDKDSGPNGQLDYEIVNGNMENS--FNINHATGEIRSVRPLDREKVSYYVLTIK 2744
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G S + +V I + D ND P F + + VPE G V RV +D D G
Sbjct: 2745 SSDKGSPSQSTSVKVMINILDENDNAPRFSQI-FSAHVPENSPLGYTVTRVTTSDEDIGI 2803
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA+ YS+ + +PF ++ +TGDI ++ L+ E Y RV
Sbjct: 2804 NAISRYSIMDTSLPFTINPSTGDIVISRPLNREDTDRYRIRV 2845
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 75/173 (43%), Gaps = 21/173 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-----------AASYFNL 66
FY A + +++V A+D D G GL+ Y ++ N + A L
Sbjct: 1214 FYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEERQFAIDITSGQVALIGKL 1273
Query: 67 D----PATEHQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
D PA D G L+ST T+NI + D ND P F V E + G
Sbjct: 1274 DYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGEL 1333
Query: 120 VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD+D G NA +YYS+ F + NTG I K LD+E Q LY
Sbjct: 1334 VSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGSIFLAKKLDFETQSLY 1386
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 74/162 (45%), Gaps = 23/162 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI----QDEGGL--- 82
G L+ ++ATD D G G V + L + TD S F LDP + I ++E
Sbjct: 599 GTELLMLRATDGDLGDNGTVRFSLQEAETDRRS-FRLDPVSGRLSTISSLDREEQAFYSL 657
Query: 83 ------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
SS +N+ + DIND +P F + Y + E + G + + V ATD D
Sbjct: 658 LVLATDLGSPPQSSMTRINVSLLDINDNSPVFYPVQYFAHIKENEPGGSYITTVSATDPD 717
Query: 130 EGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V YS+ + F V+ +G I T ALD E++ Y
Sbjct: 718 LGTNGTVKYSISAGDRSRFQVNVQSGVISTRMALDREEKTAY 759
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 22/168 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y ++D + F ++P+T
Sbjct: 2774 SQIFSAHVPENSPLGYTVTRVTTSDEDIGINAISRYSIMDTSLP----FTINPSTGDIVI 2829
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V I VTD+ND P F Y PE + G
Sbjct: 2830 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPELTEIGS 2889
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
V +V ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 2890 KVTQVFATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQILKYQN 2937
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 38 ATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGGLSSTAT--- 87
ATD D G G+ YR++ N A F LD G + +GGL T
Sbjct: 159 ATDSDIGSNGVDHRSYRIIRGN--EAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQY 216
Query: 88 -------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
VN+ V DIND P F S Y+ VPE G +V +V A D
Sbjct: 217 QLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAAD 276
Query: 128 ADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ADEG NA + Y + E PF +D TG I + LD+E ++ Y
Sbjct: 277 ADEGTNADIRYRLQDEGTPFQMDPETGLITVREPLDFEARRQY 319
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 74/155 (47%), Gaps = 18/155 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPIQD--- 78
T++QV A D D G + Y L N D A + LD T+ Q +
Sbjct: 2278 TILQVVARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELGVTQSLDRETKEQFVLMITAV 2337
Query: 79 EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNA 134
+GG L+ T T+N+ V D+ND P F S Y ++PE G V V+A+DAD NA
Sbjct: 2338 DGGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIPEDAPTGTDVLLVNASDADASTNA 2397
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
VV + + F ++ +TG I T+ LD E + Y
Sbjct: 2398 VVRI-IGGNSQFTINPSTGQIITSALLDRETKDNY 2431
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +A+D DSG +EY LL+ + S +D G + D
Sbjct: 2069 VFKAQASDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATD 2128
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y+ + E G + +V A D DEG N
Sbjct: 2129 KGQPSLSSSTEVIVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQ 2188
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y + + F +D+ TG I K LD EK Y
Sbjct: 2189 VRYGIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTY 2225
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 76/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3210 GTTVIHLNATDADSGTNAVIAYTVQSSDSD---LFVVDPNT---GVITTQGFLDFETKQS 3263
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S ATVN+++ N+ P F S Y F + E G VG V A+
Sbjct: 3264 YHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFAS 3323
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F ++ TG I + LD EK+ ERV L
Sbjct: 3324 DRDLGTDGEVHYLIFGNSRKKGFQINKKTGQIYVSGILDREKE----ERVSL 3371
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 71/168 (42%), Gaps = 18/168 (10%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF---NLDPAT 70
D L Y + + +V+A+DKDSG G + Y + + NT DA F L +
Sbjct: 997 DQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGNTGDAFGIFPDGQLYIKS 1056
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E +QD LS+T V + + D+ND P F S Y F E Q G
Sbjct: 1057 ELDRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAG 1116
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
VG+V A D D G N V YS P F + +G+I D E
Sbjct: 1117 SFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHTISGEITNTYQFDRE 1164
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L ATV++ + DIND P+F Y+ ++ E L V RV A+D DEG N +++YS+
Sbjct: 1190 LKDQATVHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSI 1249
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E+ F +D +G + LDYE Y
Sbjct: 1250 IKGNEERQFAIDITSGQVALIGKLDYEATPAY 1281
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 77/162 (47%), Gaps = 22/162 (13%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQG-- 74
++G L++V A D KD G VEY + LDN+T S + + +Q
Sbjct: 2997 KVGTKLIKVIAIDDKDFGLNSEVEYFISNDNHLGKFKLDNDTGWISVASSLISDLNQNFC 3056
Query: 75 ---PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D+G LSS ATV I VT+ N PEF ++PE G V V A D
Sbjct: 3057 ITVTAKDKGNPPLSSQATVEITVTEENYHTPEFSQSHMSATIPESHSVGSIVRTVSARDR 3116
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQ 167
D N ++ YS+ E+ F ++++TG + KALDYE Q
Sbjct: 3117 DAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYELCQ 3158
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 27/165 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGPI--- 76
G ++QV A D D G G V Y +++ NT+ F +D P + P
Sbjct: 2170 GTDIIQVFAADGDEGTNGQVRYGIVNGNTNQE--FRIDSVTGAITVAKPLDREKTPTYHL 2227
Query: 77 ----QDEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDA 128
D G + T+TV+I + DIND P F+ PY +VPE L + +V A D
Sbjct: 2228 TVQAADRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPENLRTLPRTILQVVARDD 2287
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D+G N+ + Y + ED F + A +G++ ++LD E ++ ++
Sbjct: 2288 DQGSNSKLSYVLFGGNEDNAFTLSA-SGELGVTQSLDRETKEQFV 2331
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 71/174 (40%), Gaps = 32/174 (18%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGG--- 81
+ + G ++ Q KA D D G G+V Y L N + + + GP+ + G
Sbjct: 904 ENWQAGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINGKNGTISLLGPLDVQAGSYQ 963
Query: 82 ------------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
LSS+ + + V D+ND +P F L YE ++ E + +V A+D
Sbjct: 964 IEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDK 1023
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYLERV 173
D G N + Y++ E NTGD + LD E Q Y+ V
Sbjct: 1024 DSGANGEIAYTIAE-------GNTGDAFGIFPDGQLYIKSELDRELQDRYVLMV 1070
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1724 AEVEITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTYTIISGA 1783
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ + LD E++ Y
Sbjct: 1784 DDSFRIDPESGDLIATRRLDRERRSKY 1810
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LSS+ +V + VTD+ND P FQ PY +P G V V TDAD G N+ ++YS+
Sbjct: 2446 LSSSTSVLVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSFVFAVTVTDADIGPNSELHYSL 2505
Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
G ++ VNI V D+ND +P F Q++ V Q G ++ + A D DEG N +V Y
Sbjct: 871 GTVTGDTMVNITVKDLNDNSPHFLQAIESVNVVENWQAGHSIFQAKAVDPDEGVNGMVLY 930
Query: 139 SV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
S+ P+++ F ++ G I LD + +E
Sbjct: 931 SLKQNPKNL-FAINGKNGTISLLGPLDVQAGSYQIE 965
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 70/164 (42%), Gaps = 35/164 (21%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD--EGGLS---------- 83
+ ATD DSG + Y ++ N +F++ +EH G + GGL
Sbjct: 497 ISATDGDSGLNANLRYSIVSGN--GLGWFHI---SEHSGLVTTGAAGGLDRELASQIVLN 551
Query: 84 ------------STATVNIRVTDINDKNPEF-QSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
S A + + + D+ND+ P F Q Y+ SV E G + + ATD D
Sbjct: 552 ISARDQGVHPKVSYAQLVVTLLDVNDEKPRFSQPEGYDVSVVENAPTGTELLMLRATDGD 611
Query: 130 EGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V +S+ E F +D +G + T +LD E+Q Y
Sbjct: 612 LGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFY 655
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
SS ++I V D+ND P F+ P+ + E + V A D D G N + Y +
Sbjct: 2649 FSSYEKLDITVLDVNDNAPIFKEDPFVSEILENLSPRKILTVSAVDKDSGPNGQLDYEIV 2708
Query: 142 E---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ F ++ TG+IR+ + LD EK Y+
Sbjct: 2709 NGNMENSFNINHATGEIRSVRPLDREKVSYYV 2740
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N V Y + +
Sbjct: 1515 VTILVTDLNDNVPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEVEYEIINGDTDT 1574
Query: 146 FVVDANTGDIRTNKAL 161
F+VD +GD+R AL
Sbjct: 1575 FIVDRYSGDLRVASAL 1590
Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG + Y + N F++ P T E Q
Sbjct: 1329 RIGELVSSVTATDSDSGDNADLYYSITGTNNHGT--FSISPNTGSIFLAKKLDFETQSLY 1386
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G SST +V I V D ND P F S+ E G +V V A D
Sbjct: 1387 KLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVTAHD 1446
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + Y++ + +P F +D G I TN +D E L+
Sbjct: 1447 PDADINGQLSYTIIQQMPRGNHFTIDEVKGTIYTNAEIDREFANLF 1492
Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 68/174 (39%), Gaps = 20/174 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G V+Y + + ++ LD
Sbjct: 694 YFAHIKENEPGGSYITTVSATDPDLGTNGTVKYSISAGDRSRFQVNVQSGVISTRMALDR 753
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V I V D D P F + Y F V E G VG
Sbjct: 754 EEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFGQVAYSFVVFENVALGYHVG 813
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A+ D N + Y D F ++ TG + T +D E+Q Y +V
Sbjct: 814 SVSASTMDLNSN-ISYLITTGDQKGMFAINQVTGQLTTANVIDREEQSFYQLKV 866
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 5/123 (4%)
Query: 59 DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
++ S++NL H P +STA V+I + D+ND P F S P +PE
Sbjct: 2009 ESQSFYNL-VVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLS-PKLTYIPENTPID 2066
Query: 118 LAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
V + A+D D G N+ + Y++ P F + G++R LD E+ Y V
Sbjct: 2067 TVVFKAQASDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2126
Query: 176 ISK 178
K
Sbjct: 2127 TDK 2129
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNAVVYYSV 140
SS A++ I V DIND P F Y ++ E G V + ATD D G NA + YS+
Sbjct: 456 SSVASLVIFVNDINDHPPVFSQQVYRVNLSEEAPPGSYVSGISATDGDSGLNANLRYSI 514
>gi|296195619|ref|XP_002745420.1| PREDICTED: protocadherin Fat 4 [Callithrix jacchus]
Length = 4981
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 75/164 (45%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F +DP + E +
Sbjct: 1756 GSKIMQLTAMDADEGANALVTYTIISGADDS---FRIDPESGDLIATRRLDRERRSKYSL 1812
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQ 132
D+G SS +NI V+D+ND P+F Y F +PE G V + ATD D G+
Sbjct: 1813 LVRADDGLQSSDMRINITVSDVNDHTPKFSRPVYSFDIPEDTIPGSLVAAILATDDDSGE 1872
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG + LDYE QQ Y+ V
Sbjct: 1873 NGEITYIVNEDDEDGIFFLNPITGVFNLTRVLDYEVQQYYILTV 1916
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 83/170 (48%), Gaps = 22/170 (12%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL++Y + N + A + +
Sbjct: 3096 ATIPESHSIGSIVRTVSARDRDTAMNGLIKYSISSGNEEGIFAINSSTGVLTLAKALDYE 3155
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
+H+ I D G ++ T +V + V D+ND +P F S Y +V E G V
Sbjct: 3156 LCQKHEMTISATDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIH 3215
Query: 123 VHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y+V D+ FV+D NTG I T LD+E +Q Y
Sbjct: 3216 LNATDADSGTNAVIAYTVQSSDSDL-FVIDPNTGVITTQGFLDFETKQSY 3264
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 75/162 (46%), Gaps = 23/162 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------------ 77
G L+ ++ATD D G G V + L + TD S F LDP + I
Sbjct: 599 GTELLVLRATDGDLGDNGTVRFSLQEAETDRRS-FRLDPVSGRLSTISSLDREDQAFYSL 657
Query: 78 -----DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
D G SS A +N+ + DIND +P F + Y + E + G + + V ATD D
Sbjct: 658 LVLATDMGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKENEPGGSYITTVSATDPD 717
Query: 130 EGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V YS+ + F V+A +G I T ALD E++ Y
Sbjct: 718 LGTNGTVKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAY 759
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 24/162 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V A DKDSG G ++Y +++ N + + F+++ AT I+
Sbjct: 2687 VLTVSAMDKDSGPNGQLDYEIVNGNMENS--FSINHATGEIRSIRPLDREKVSHYVLTIK 2744
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G S + +V I + D ND P F + + VPE G V RV +D D G
Sbjct: 2745 SSDKGSPSQSTSVKVMINILDENDNAPRFSQI-FSAHVPENSPLGYTVTRVTTSDEDIGI 2803
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA+ YS+ + +PF ++ +TGDI ++ L+ E Y RV
Sbjct: 2804 NAISRYSIMDTSLPFTINPSTGDIVISRPLNREDTDRYRIRV 2845
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 22/168 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y ++D + F ++P+T
Sbjct: 2774 SQIFSAHVPENSPLGYTVTRVTTSDEDIGINAISRYSIMDTSLP----FTINPSTGDIVI 2829
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V I VTD+ND P F Y PE + G
Sbjct: 2830 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPELTEIGS 2889
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
V +V ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 2890 KVTQVSATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQILKYQN 2937
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 75/173 (43%), Gaps = 21/173 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-----------AASYFNL 66
FY A + +++V A+D D G GL+ Y ++ N + A L
Sbjct: 1214 FYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEERQFAIDSTSGQVALIGKL 1273
Query: 67 D----PATEHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
D PA D G L+ST T+NI + D ND P F V E + G
Sbjct: 1274 DYEATPAYSLVIEAVDSGTVSLNSTCTLNIDILDENDNTPSFPKTTLFVDVLENMRIGEL 1333
Query: 120 VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD+D G NA ++YS+ F + NTG I K LD+E + LY
Sbjct: 1334 VSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSIFLAKKLDFETKSLY 1386
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 38 ATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGGLSSTAT--- 87
ATD D G G+ YR++ N A F LD G + +GGL T
Sbjct: 159 ATDSDIGSNGVDHRSYRIIRGN--EAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQY 216
Query: 88 -------------------VNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
VN+ V DIND P F S Y+ VPE G +V +V A D
Sbjct: 217 QLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDTVVGSSVLQVAAAD 276
Query: 128 ADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ADEG NA + Y + E PF +D TG I + LD+E ++ Y
Sbjct: 277 ADEGTNADIRYRLQDEGTPFQMDPETGLITVREPLDFEARRQY 319
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 80/165 (48%), Gaps = 27/165 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGPI--- 76
G ++QV A D D G G V Y +++ NT+ F LD P + P
Sbjct: 2170 GTDIIQVFAADGDEGTNGQVRYGIVNGNTNQE--FRLDSVTGAITVAKPLDREKTPTYHL 2227
Query: 77 ----QDEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDA 128
D G + T+TV+I + DIND P F+ PY +VPE L + +V A D
Sbjct: 2228 TVQATDRGSTPRTDTSTVSITLLDINDFVPIFELSPYSVNVPENLGTLPRTILQVVARDD 2287
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D+G N+ + Y + ED F + A +G++R ++LD E ++ ++
Sbjct: 2288 DQGSNSKLSYVLFGGNEDNAFTLSA-SGELRVTQSLDRETKEHFV 2331
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 72/155 (46%), Gaps = 18/155 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPIQ---- 77
T++QV A D D G + Y L N D A + LD T+ +
Sbjct: 2278 TILQVVARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELRVTQSLDRETKEHFVLMITAT 2337
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNA 134
D G L+ T T+N+ V D+ND P F S Y ++PE G V V+A+DAD NA
Sbjct: 2338 DSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIPEDAPTGTDVLLVNASDADASTNA 2397
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V+ + + F ++ +TG I T+ LD E + Y
Sbjct: 2398 VIRI-IGGNSQFTINPSTGQIITSALLDRETKDNY 2431
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 80/188 (42%), Gaps = 23/188 (12%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF---NLDPAT 70
D L Y + + +V+A+DKDSG G + Y + + NT DA F L +
Sbjct: 997 DQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGNTGDAFGIFPDGQLYIKS 1056
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E +QD LS+T V + + D+ND P F S Y F E Q G
Sbjct: 1057 ELDRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAG 1116
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLER---V 173
VG+V A D D G N V YS P F + A +G+I D ++ L R V
Sbjct: 1117 SFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTHQFD--RESLMRRRGTAV 1174
Query: 174 FLISKFAT 181
F + AT
Sbjct: 1175 FTFTVIAT 1182
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +ATD DSG +EY L++ + S +D G + D
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLMNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATD 2128
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y+ + E G + +V A D DEG N
Sbjct: 2129 KGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQ 2188
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y + + F +D+ TG I K LD EK Y
Sbjct: 2189 VRYGIVNGNTNQEFRLDSVTGAITVAKPLDREKTPTY 2225
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 77/162 (47%), Gaps = 22/162 (13%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQG-- 74
E+G L++V A D KD G VEY + LDN+T S + + +Q
Sbjct: 2997 EVGTKLIKVTAIDDKDFGLNSEVEYFISNDNHLGKFKLDNDTGWISVASSLISDLNQNFF 3056
Query: 75 ---PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D+G LSS ATV I VT+ N PEF ++PE G V V A D
Sbjct: 3057 ITVTAKDKGNPPLSSQATVQITVTEENYHTPEFSQSHMSATIPESHSIGSIVRTVSARDR 3116
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQ 167
D N ++ YS+ E+ F ++++TG + KALDYE Q
Sbjct: 3117 DTAMNGLIKYSISSGNEEGIFAINSSTGVLTLAKALDYELCQ 3158
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 76/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3210 GTTVIHLNATDADSGTNAVIAYTVQSSDSD---LFVIDPNT---GVITTQGFLDFETKQS 3263
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S ATVN+++ N+ P F S Y F + E G VG V A+
Sbjct: 3264 YHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTVVGEVFAS 3323
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F ++ TG I + LD EK+ ERV L
Sbjct: 3324 DRDLGTDGEVHYLIFGNSRKKGFQINKKTGQIYVSGILDREKE----ERVSL 3371
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L ATV++ + DIND P+F Y+ ++ E L V RV A+D DEG N +++YS+
Sbjct: 1190 LKDQATVHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSI 1249
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E+ F +D+ +G + LDYE Y
Sbjct: 1250 IKGNEERQFAIDSTSGQVALIGKLDYEATPAY 1281
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 71/174 (40%), Gaps = 32/174 (18%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPATEHQGPIQ 77
+ + G ++ Q KA D D G G+V Y L N N + L P H G Q
Sbjct: 904 ENWQAGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINEKNGTISLLGPLDVHAGSYQ 963
Query: 78 DE--------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
E LSS+ + + V D+ND +P F L YE ++ E + +V A+D
Sbjct: 964 IEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDK 1023
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYLERV 173
D G N + Y++ E NTGD + LD E Q Y+ V
Sbjct: 1024 DSGANGEIAYTIAE-------GNTGDAFGIFPDGQLYIKSELDRELQDRYVLMV 1070
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1724 AEVEITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTYTIISGA 1783
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ + LD E++ Y
Sbjct: 1784 DDSFRIDPESGDLIATRRLDRERRSKY 1810
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LSS+ +V + VTD+ND P FQ PY +P G V V TDAD G N+ ++YS+
Sbjct: 2446 LSSSTSVLVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSFVFAVTVTDADIGPNSELHYSL 2505
Score = 42.0 bits (97), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
G ++ VNI V D+ND +P F Q++ V Q G ++ + A D DEG N +V Y
Sbjct: 871 GTVTGDTMVNITVKDLNDNSPHFLQAIESVNVVENWQAGHSIFQAKAVDPDEGVNGMVLY 930
Query: 139 SV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
S+ P+++ F ++ G I LD +E
Sbjct: 931 SLKQNPKNL-FAINEKNGTISLLGPLDVHAGSYQIE 965
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
SS ++I V D+ND P F+ P+ + E V V A D D G N + Y +
Sbjct: 2649 FSSYEKLDITVLDVNDNAPIFKEDPFVSEILENLSPRKVLTVSAMDKDSGPNGQLDYEIV 2708
Query: 142 E---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ F ++ TG+IR+ + LD EK Y+
Sbjct: 2709 NGNMENSFSINHATGEIRSIRPLDREKVSHYV 2740
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 68/174 (39%), Gaps = 20/174 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G V+Y + + ++ LD
Sbjct: 694 YFAHIKENEPGGSYITTVSATDPDLGTNGTVKYSISAGDRSRFQVNAQSGVISTRMALDR 753
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V I V D D P F + Y F V E G VG
Sbjct: 754 EEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFENMALGYHVG 813
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A+ D N + Y D F ++ TG + T +D E+Q Y +V
Sbjct: 814 SVSASTMDLNSN-ITYLITTGDQKGMFAINQVTGQLTTANVIDREEQSFYQLKV 866
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N V Y + +
Sbjct: 1515 VTILVTDLNDNVPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEVEYEIINGDTDT 1574
Query: 146 FVVDANTGDIRTNKAL 161
F+VD +GD+R AL
Sbjct: 1575 FIVDRYSGDLRVASAL 1590
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 67/169 (39%), Gaps = 32/169 (18%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI----------- 76
+G + V ATD DSG + Y + N F++ P T G I
Sbjct: 1329 RIGELVSSVTATDSDSGDNADLHYSITGTNNHGT--FSISPNT---GSIFLAKKLDFETK 1383
Query: 77 ---------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVH 124
+D+G SST +V I V D ND P F S+ E G +V V
Sbjct: 1384 SLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVT 1443
Query: 125 ATDADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
A D D N + Y++ + +P F +D G I TN +D E L+
Sbjct: 1444 AHDPDADINGQLSYTIIQQMPRGNHFTIDEVKGTIYTNAEIDREFANLF 1492
Score = 39.7 bits (91), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 55/123 (44%), Gaps = 5/123 (4%)
Query: 59 DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
++ S++NL H P +STA V+I + D+ND P F S P +PE
Sbjct: 2009 ESQSFYNL-VVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLS-PKLTYIPENTPID 2066
Query: 118 LAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
V + ATD D G N+ + Y++ P F + G++R LD E+ Y V
Sbjct: 2067 TVVFKAQATDPDSGPNSYIEYTLMNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2126
Query: 176 ISK 178
K
Sbjct: 2127 TDK 2129
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV 140
SS A++ I V DIND P F Y ++ E G V V ATD D G NA + YS+
Sbjct: 456 SSVASLVIFVNDINDHPPVFSQQVYRVNLSEEAPPGSYVSGVSATDGDSGLNANLRYSI 514
>gi|344275265|ref|XP_003409433.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 2-like [Loxodonta africana]
Length = 2928
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 84/181 (46%), Gaps = 26/181 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-NTDAASYFNLDPAT---EHQG 74
Y R+ E+G ++ V+ATD D+ + YRLL+ + + F +DP + +G
Sbjct: 295 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGPGGNPSEVFEIDPRSGVIRTRG 354
Query: 75 PI------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D G S+TA V + V D ND P+F Y V E
Sbjct: 355 PVDREEVESYQLTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYVVQVREDVA 414
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLER 172
G V RV A+D D+G NA+V+YS+ F +DA TG + LDYE + Y R
Sbjct: 415 PGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLR 474
Query: 173 V 173
V
Sbjct: 475 V 475
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LD 67
Y R+ G +++V A+D+D G LV Y ++ N Y + LD
Sbjct: 405 YVVQVREDVAPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 464
Query: 68 PATEHQGPIQ---DEGG---LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
T + ++ +GG LS+ + V +++ DIND P F S P++ +V E G
Sbjct: 465 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQILDINDNAPIFVSTPFQATVLESVPLGYL 524
Query: 120 VGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V A DAD G NA + Y V D PF ++ TG I LD E+ Y
Sbjct: 525 VLHVQAIDADAGDNARLEYRLAGVGHDFPFSINNGTGWISVAAELDREEVDFY 577
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------------AASYFNLDPATEHQ-- 73
+G +++ V A D+D+ ++ Y++ NT + LD E Q
Sbjct: 626 VGTSVVTVSAVDRDA--HSVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYV 683
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G TA V + VTD N P FQS Y +V E + G V + ATD D G
Sbjct: 684 LAVTASDGTRQDTAQVVVNVTDANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 743
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + IP F +DA+TG + T LDYE Q Y
Sbjct: 744 ENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSY 782
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 33/181 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPATE---- 71
Y A + G + ++A D D G+ G +EY L D+ ++ +F+LDP T
Sbjct: 187 YQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSN--HFFSLDPVTGAVTT 244
Query: 72 -------------HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ +QD G S+ AT+ I VTD ND +P F+ Y+ S+ E +
Sbjct: 245 AEELDRETKSTHVFRVTVQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 304
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV-------PEDIPFVVDANTGDIRTNKALDYEKQQL 168
G V V ATD D NA + Y + P ++ F +D +G IRT +D E+ +
Sbjct: 305 VGYEVLTVRATDGDAPPNANILYRLLEGPGGNPSEV-FEIDPRSGVIRTRGPVDREEVES 363
Query: 169 Y 169
Y
Sbjct: 364 Y 364
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLDPATEHQGPIQ-- 77
+++Q+ ATD+DSG G V Y + + LD Q ++
Sbjct: 834 SVLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYTLRAY 893
Query: 78 --DEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G + + + VT D+ND P F+ ++ V E GLAV RV ATD DEG
Sbjct: 894 AVDKGMPPARTPMEVMVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGT 953
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 954 NAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYEDRPEYI 994
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 28/173 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSSTA 86
G T++ + ATD+D+G+ + Y + D+ F +D A Q + E +S T
Sbjct: 729 GTTVVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTL 784
Query: 87 TVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
+ R V D+ND P+F Y+ SV E +V ++ ATD D
Sbjct: 785 AITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRD 844
Query: 130 EGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N V+Y+ D F+V++ +G +RT + LD E Y R + + K
Sbjct: 845 SGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYTLRAYAVDK 897
Score = 42.7 bits (99), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 32/163 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G+ + +V ATD D G + Y++++ N F LD + + D
Sbjct: 937 IGLAVARVTATDPDEGTNAQIMYQIVEGNI--PEVFQLDIFSGELTALVDLDYEDRPEYI 994
Query: 79 ------EGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRV 123
L S ATV++R+ D ND P + F S P G A+GRV
Sbjct: 995 LVIQATSAPLVSRATVHVRLLDRNDNPPVLGNFEILFNNYVTNRSSSFPGG----AIGRV 1050
Query: 124 HATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
A D D + + ++ V ++A+TG++R ++ALD +
Sbjct: 1051 PAHDPDISDSLTYSFERGNELSLVLLNASTGELRLSRALDNNR 1093
Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 73 QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
Q P Q G S+ ++ R + P+FQ Y+ +VPE Q G V + A D DEG
Sbjct: 153 QTPGQGTGEGSAGESMGGRRKRNVNTAPQFQPPSYQATVPENQPAGTPVASLRAIDPDEG 212
Query: 132 QNAVVYYSV------PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ + Y++ + F +D TG + T + LD E + ++ RV
Sbjct: 213 EAGRLEYTMDALFDSRSNHFFSLDPVTGAVTTAEELDRETKSTHVFRV 260
Score = 39.3 bits (90), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 32/136 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASY-------------FN 65
LG ++ V+A D D+G +EYRL ++N T S F
Sbjct: 521 LGYLVLHVQAIDADAGDNARLEYRLAGVGHDFPFSINNGTGWISVAAELDREEVDFYSFG 580
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
++ A +H P L+++A+V++ + D+ND NP F Y + E G +V V
Sbjct: 581 VE-ARDHGTP-----ALTASASVSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVS 634
Query: 125 ATDADEGQNAVVYYSV 140
A D D ++V+ Y +
Sbjct: 635 AVDRDA--HSVITYQI 648
>gi|440909686|gb|ELR59571.1| Cadherin EGF LAG seven-pass G-type receptor 2 [Bos grunniens mutus]
Length = 2919
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 85/181 (46%), Gaps = 26/181 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS-YFNLDPAT---EHQG 74
Y R+ E+G ++ V+ATD D+ + YRLL+ + + S F +DP + +G
Sbjct: 291 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRSGVIRTRG 350
Query: 75 PI------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D G ++TA + + V D ND P+F Y V E
Sbjct: 351 PVDREEVESYQLTVEASDQGRDPGPRTATAAIFLSVEDDNDNAPQFSEKRYVVQVREDVS 410
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLER 172
G V RV A+D D+G NA+V+YS+ F +DA TG + LDYE + Y R
Sbjct: 411 PGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLR 470
Query: 173 V 173
V
Sbjct: 471 V 471
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LD 67
Y R+ G +++V A+D+D G LV Y ++ N Y + LD
Sbjct: 401 YVVQVREDVSPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 460
Query: 68 PATEHQGPIQ---DEGG---LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
T + ++ +GG LS+ + V ++V DIND P F S P++ +V E G
Sbjct: 461 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 520
Query: 120 VGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V A DAD G NA + Y V D PF ++ TG I LD E+ Y
Sbjct: 521 VLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFY 573
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------------AASYFNLDPATEHQ-- 73
+G +++ V A D+D+ ++ Y++ NT + LD E Q
Sbjct: 622 VGTSVVTVSAVDRDA--HSVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYV 679
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G TA V + VTD N P FQS Y ++ E + G V + ATD D G
Sbjct: 680 LAVTASDGTRQDTAQVVVNVTDANTHRPVFQSSHYTVNINEDRPAGTTVVLISATDEDTG 739
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + IP F +DA+TG + T LDYE Q Y
Sbjct: 740 ENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSY 778
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 33/181 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPATE---- 71
Y A + G + ++A D D G+ G +EY L D+ ++ +F+LDP T
Sbjct: 183 YQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSN--HFFSLDPITGAVTT 240
Query: 72 -------------HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ QD G S+ AT+ I VTD ND +P F+ Y+ S+ E +
Sbjct: 241 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 300
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV-------PEDIPFVVDANTGDIRTNKALDYEKQQL 168
G V V ATD D NA + Y + P ++ F +D +G IRT +D E+ +
Sbjct: 301 VGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEV-FEIDPRSGVIRTRGPVDREEVES 359
Query: 169 Y 169
Y
Sbjct: 360 Y 360
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLDPATEHQGPIQ-- 77
+++Q+ ATD+DSG G V Y + + LD Q ++
Sbjct: 830 SVLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAY 889
Query: 78 --DEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G + +++ VT D+ND P F+ ++ V E GLAV RV ATD DEG
Sbjct: 890 AVDKGMPPARTPMDVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGT 949
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 950 NAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYEDRPEYV 990
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSSTA 86
G T++ + ATD+D+G+ + Y + D+ F +D A Q + E +S T
Sbjct: 725 GTTVVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTL 780
Query: 87 TVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
+ R V D+ND P+F Y+ SV E +V ++ ATD D
Sbjct: 781 AITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRD 840
Query: 130 EGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N V+Y+ D F+V++ +G +RT + LD E Y+ R + + K
Sbjct: 841 SGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYAVDK 893
Score = 42.7 bits (99), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 32/163 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G+ + +V ATD D G + Y++++ N F LD + + D
Sbjct: 933 IGLAVARVTATDPDEGTNAQIMYQIVEGNI--PEVFQLDIFSGELTALVDLDYEDRPEYV 990
Query: 79 ------EGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRV 123
L S ATV++R+ D ND P + F S P G A+GRV
Sbjct: 991 LVIQATSAPLVSRATVHVRLLDRNDNPPVLGNFEILFNNYVTNRSSSFPGG----AIGRV 1046
Query: 124 HATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
A D D + + ++ V ++A+TG++R ++ALD +
Sbjct: 1047 PAHDPDISDSLTYSFERGNELSLVLLNASTGELRLSRALDNNR 1089
Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 32/136 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASY-------------FN 65
LG ++ V+A D D+G +EYRL ++N T S F
Sbjct: 517 LGYLVLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFYSFG 576
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
++ A +H P L+++A+V++ + D+ND NP F Y + E G +V V
Sbjct: 577 VE-ARDHGTP-----ALTASASVSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVS 630
Query: 125 ATDADEGQNAVVYYSV 140
A D D ++V+ Y +
Sbjct: 631 AVDRDA--HSVITYQI 644
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 100 PEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV------PEDIPFVVDANT 152
P+FQ Y+ +VPE Q G V + A D DEG+ + Y++ + F +D T
Sbjct: 176 PQFQPPSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNHFFSLDPIT 235
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G + T + LD E + ++ RV
Sbjct: 236 GAVTTAEELDRETKSTHVFRV 256
>gi|345496415|ref|XP_001602469.2| PREDICTED: protocadherin-like wing polarity protein stan-like
[Nasonia vitripennis]
Length = 3216
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 77/151 (50%), Gaps = 29/151 (19%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH 72
T DS+ Y R+ +G ++++V ATD D G G V+Y +L+N+ D + F +DPAT
Sbjct: 921 TFDSVQYQGAVREDVLIGTSVLKVTATDIDDGLNGRVKY-VLENDGDGS--FAIDPAT-- 975
Query: 73 QGPIQ--------------------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFS 110
G I+ D G LSST +V I++ D+ND P F+
Sbjct: 976 -GVIRTAKALDRESTARYNLKAVAVDRGSPALSSTISVVIKIEDVNDSPPTFEKEKIVLY 1034
Query: 111 VPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
+PE G VG ++A D DEG NAVV YS+
Sbjct: 1035 IPENSPIGSTVGEIYAHDPDEGPNAVVQYSI 1065
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 78/167 (46%), Gaps = 26/167 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA----ASYFNLDPAT---EHQGPIQDE-- 79
+G T++ V ATD D G+ + Y L + A S F ++P T P+ E
Sbjct: 826 VGTTVLVVSATDSDVGQNAQITYSLSSDEDGAESQETSKFAINPQTGAITTTKPLDREMD 885
Query: 80 -----------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVH 124
GG +S T V I VTD+ND P F S+ Y+ +V E G +V +V
Sbjct: 886 KGYLLTITAKDGGVPPMSDTTDVEISVTDVNDNAPTFDSVQYQGAVREDVLIGTSVLKVT 945
Query: 125 ATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
ATD D+G N V Y + D F +D TG IRT KALD E Y
Sbjct: 946 ATDIDDGLNGRVKYVLENDGDGSFAIDPATGVIRTAKALDRESTARY 992
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 84/190 (44%), Gaps = 43/190 (22%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA-------SYFNLDPATE 71
Y A + +G +++ +KATD+D GK VEY ++ S F +DP T
Sbjct: 378 YEASVHESVPIGSSVISIKATDQDMGKNSEVEYSIVSTTGGGTTTLTEDQSTFRIDPRT- 436
Query: 72 HQGPIQDEGGL-------------------------SSTATVNIRVTDINDKNPEFQSLP 106
G + + L +++AT+ +RV D ND P+F
Sbjct: 437 --GIVTTKTSLDREKTEVYTVIIQASDLANPESNRQTASATLVVRVLDDNDNYPQFSERT 494
Query: 107 YEFSVPEGQD---GLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNK 159
Y S+PE D + + A DAD G NA + Y++ ++I F +D+ TGD+ K
Sbjct: 495 YIVSIPEDMDYTLNPVIAEIRAIDADAGSNAAMRYAIIGGNTQNI-FQIDSQTGDVILVK 553
Query: 160 ALDYEKQQLY 169
LDYE + Y
Sbjct: 554 PLDYETVKNY 563
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG S TA V + V+D N+ P F++ PY SV E G V V ATD+D GQNA +
Sbjct: 787 DSGGRSDTALVYVNVSDANNYAPVFENAPYSISVFEDAPVGTTVLVVSATDSDVGQNAQI 846
Query: 137 YYSVPED---------IPFVVDANTGDIRTNKALDYEKQQLYL 170
YS+ D F ++ TG I T K LD E + YL
Sbjct: 847 TYSLSSDEDGAESQETSKFAINPQTGAITTTKPLDREMDKGYL 889
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 31/172 (18%)
Query: 27 HELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------- 77
+ L + +++A D D+G + Y ++ NT + F +D T ++
Sbjct: 505 YTLNPVIAEIRAIDADAGSNAAMRYAIIGGNTQ--NIFQIDSQTGDVILVKPLDYETVKN 562
Query: 78 -------DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
+GG+ S+T + +RV D+ND P F + ++ +V E G +V +V A
Sbjct: 563 YKIIVRAQDGGMPAKSNTTQLLVRVKDVNDNVPRFHTTLFQEAVSESVSIGYSVLKVQAY 622
Query: 127 DADEGQNAVVYYSV---------PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
DADEG NA + YS+ E+ P V+ TG I T K LD E+ Y
Sbjct: 623 DADEGPNAQIKYSIGSRDLSGGSTENFPVAVNCETGWIFTVKQLDREQCSKY 674
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 77/187 (41%), Gaps = 40/187 (21%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
Y A ++ E GV + VKA D + G L+D + S FNLD + G +
Sbjct: 272 LYVAAVEEEKEPGVAVTTVKARDPEGGIVRYTMSSLIDARSQ--SLFNLD---ANSGKVT 326
Query: 78 DEGGL----------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
L + T T+ I V D ND P F+S YE SV E
Sbjct: 327 TTAQLDRENVDVHYFRVLAVDDSFPPRTGTTTLQINVLDANDHAPTFESPEYEASVHESV 386
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSV------------PEDIPFVVDANTGDIRTNKALD 162
G +V + ATD D G+N+ V YS+ + F +D TG + T +LD
Sbjct: 387 PIGSSVISIKATDQDMGKNSEVEYSIVSTTGGGTTTLTEDQSTFRIDPRTGIVTTKTSLD 446
Query: 163 YEKQQLY 169
EK ++Y
Sbjct: 447 REKTEVY 453
Score = 39.3 bits (90), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 32/184 (17%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQ-G 74
+LF A++ + +G ++++V+A D D G ++Y + + S N A + G
Sbjct: 600 TLFQEAVS-ESVSIGYSVLKVQAYDADEGPNAQIKYSIGSRDLSGGSTENFPVAVNCETG 658
Query: 75 PI----------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
I E S++ATV + VTD+ND +P F+ YE +
Sbjct: 659 WIFTVKQLDREQCSKYQFVVVASDSGEPPKSASATVILTVTDVNDNDPYFEPKSYEAVIA 718
Query: 113 EGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGD--IRTNKALDYEKQ 166
E G V V ATD DE +A ++Y + F + + G I + LDY+++
Sbjct: 719 EDDPPGTPVTTVTATDPDE--DARIHYEISSGNTRGRFSITSQNGRGLITVAQPLDYKQE 776
Query: 167 QLYL 170
+ ++
Sbjct: 777 KRFV 780
>gi|297293338|ref|XP_002804233.1| PREDICTED: protocadherin Fat 4-like isoform 2 [Macaca mulatta]
Length = 4981
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 83/170 (48%), Gaps = 22/170 (12%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL++Y + N + A + +
Sbjct: 3096 ATIPESHSVGSIVRTVSARDRDAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYE 3155
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
+H+ I D G ++ T +V + V D+ND +P F S Y +V E G V
Sbjct: 3156 LCQKHEMTISAIDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIH 3215
Query: 123 VHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y+V D+ FVVD NTG I T LD+E +Q Y
Sbjct: 3216 LNATDADSGTNAVIAYTVQSSDSDL-FVVDPNTGVITTQGFLDFETKQSY 3264
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F +DP + E +
Sbjct: 1756 GSKIMQLTAMDADEGANALVTYTIISGADDS---FRIDPESGDLIATRRLDRERRSKYSL 1812
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQ 132
D+G SS +NI V+D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1813 LVRADDGLQSSDMRINITVSDVNDHTPKFSRPMYSFDIPEDTIPGSLVAAILATDDDSGV 1872
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG + LDYE QQ Y+ V
Sbjct: 1873 NGEITYIVNEDDEDGIFFLNPITGVFNLTRVLDYEVQQYYILTV 1916
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 24/162 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V A DKDSG G ++Y +++ N + + FN++ AT ++
Sbjct: 2687 ILTVSAVDKDSGPNGQLDYEIVNGNMENS--FNINHATGEIRSVRPLDREKVSYYVLTIK 2744
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G S + +V I + D ND P F + + VPE G V RV +D D G
Sbjct: 2745 SSDKGSPSQSTSVKVMINILDENDNAPRFSQI-FSAHVPENSPLGYTVTRVTTSDEDIGI 2803
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA+ YS+ + +PF ++ +TGDI ++ L+ E Y RV
Sbjct: 2804 NAISRYSIMDTSLPFTINPSTGDIVISRPLNREDTDRYRIRV 2845
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 75/173 (43%), Gaps = 21/173 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-----------AASYFNL 66
FY A + +++V A+D D G GL+ Y ++ N + A L
Sbjct: 1214 FYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEERQFAIDITSGQVALIGKL 1273
Query: 67 D----PATEHQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
D PA D G L+ST T+NI + D ND P F V E + G
Sbjct: 1274 DYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGEL 1333
Query: 120 VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD+D G NA +YYS+ F + NTG I K LD+E Q LY
Sbjct: 1334 VSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGSIFLAKKLDFETQSLY 1386
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 74/162 (45%), Gaps = 23/162 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI----QDEGGL--- 82
G L+ ++ATD D G G V + L + TD S F LDP + I ++E
Sbjct: 599 GTELLMLRATDGDLGDNGTVRFSLQEAETDRRS-FRLDPVSGRLSTISSLDREEQAFYSL 657
Query: 83 ------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
SS +N+ + DIND +P F + Y + E + G + + V ATD D
Sbjct: 658 LVLATDLGSPPQSSMTRINVSLLDINDNSPVFYPVQYFAHIKENEPGGSYITTVSATDPD 717
Query: 130 EGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V YS+ + F V+ +G I T ALD E++ Y
Sbjct: 718 LGTNGTVKYSISAGDRSRFQVNVQSGVISTRMALDREEKTAY 759
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 22/168 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y ++D + F ++P+T
Sbjct: 2774 SQIFSAHVPENSPLGYTVTRVTTSDEDIGINAISRYSIMDTSLP----FTINPSTGDIVI 2829
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V I VTD+ND P F Y PE + G
Sbjct: 2830 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPELTEIGS 2889
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
V +V ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 2890 KVTQVFATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQILKYQN 2937
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPIQ---- 77
T++QV A D D G + Y L N D A + LD T+ Q +
Sbjct: 2278 TILQVVARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELGVTQSLDRETKEQFVLMITAT 2337
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNA 134
D G L+ T T+N+ V D+ND P F S Y ++PE G V V+A+DAD NA
Sbjct: 2338 DSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIPEDAPTGTDVLLVNASDADASTNA 2397
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
VV + + F ++ +TG I T+ LD E + Y
Sbjct: 2398 VVRI-IGGNSQFTINPSTGQIITSALLDRETKDNY 2431
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 38 ATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGGLSSTAT--- 87
ATD D G G+ YR++ N A F LD G + +GGL T
Sbjct: 159 ATDSDIGSNGVDHRSYRIIRGN--EAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQY 216
Query: 88 -------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
VN+ V DIND P F S Y+ VPE G +V +V A D
Sbjct: 217 QLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAAD 276
Query: 128 ADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ADEG NA + Y + E PF +D TG I + LD+E ++ Y
Sbjct: 277 ADEGTNADIRYRLQDEGTPFQMDPETGLITVREPLDFEARRQY 319
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +A+D DSG +EY LL+ + S +D G + D
Sbjct: 2069 VFKAQASDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATD 2128
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y+ + E G + +V A D DEG N
Sbjct: 2129 KGQPSLSSSTEVIVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQ 2188
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y + + F +D+ TG I K LD EK Y
Sbjct: 2189 VRYGIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTY 2225
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 76/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3210 GTTVIHLNATDADSGTNAVIAYTVQSSDSD---LFVVDPNT---GVITTQGFLDFETKQS 3263
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S ATVN+++ N+ P F S Y F + E G VG V A+
Sbjct: 3264 YHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFAS 3323
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F ++ TG I + LD EK+ ERV L
Sbjct: 3324 DRDLGTDGEVHYLIFGNSRKKGFQINKKTGQIYVSGILDREKE----ERVSL 3371
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 71/168 (42%), Gaps = 18/168 (10%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF---NLDPAT 70
D L Y + + +V+A+DKDSG G + Y + + NT DA F L +
Sbjct: 997 DQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGNTGDAFGIFPDGQLYIKS 1056
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E +QD LS+T V + + D+ND P F S Y F E Q G
Sbjct: 1057 ELDRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAG 1116
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
VG+V A D D G N V YS P F + +G+I D E
Sbjct: 1117 SFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHTISGEITNTYQFDRE 1164
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L ATV++ + DIND P+F Y+ ++ E L V RV A+D DEG N +++YS+
Sbjct: 1190 LKDQATVHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSI 1249
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E+ F +D +G + LDYE Y
Sbjct: 1250 IKGNEERQFAIDITSGQVALIGKLDYEATPAY 1281
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 77/162 (47%), Gaps = 22/162 (13%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQG-- 74
++G L++V A D KD G VEY + LDN+T S + + +Q
Sbjct: 2997 KVGTKLIKVIAIDDKDFGLNSEVEYFISNDNHLGKFKLDNDTGWISVASSLISDLNQNFC 3056
Query: 75 ---PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D+G LSS ATV I VT+ N PEF ++PE G V V A D
Sbjct: 3057 ITVTAKDKGNPPLSSQATVEITVTEENYHTPEFSQSHMSATIPESHSVGSIVRTVSARDR 3116
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQ 167
D N ++ YS+ E+ F ++++TG + KALDYE Q
Sbjct: 3117 DAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYELCQ 3158
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 27/165 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGPI--- 76
G ++QV A D D G G V Y +++ NT+ F +D P + P
Sbjct: 2170 GTDIIQVFAADGDEGTNGQVRYGIVNGNTNQE--FRIDSVTGAITVAKPLDREKTPTYHL 2227
Query: 77 ----QDEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDA 128
D G + T+TV+I + DIND P F+ PY +VPE L + +V A D
Sbjct: 2228 TVQAADRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPENLRTLPRTILQVVARDD 2287
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D+G N+ + Y + ED F + A +G++ ++LD E ++ ++
Sbjct: 2288 DQGSNSKLSYVLFGGNEDNAFTLSA-SGELGVTQSLDRETKEQFV 2331
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 71/174 (40%), Gaps = 32/174 (18%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGG--- 81
+ + G ++ Q KA D D G G+V Y L N + + + GP+ + G
Sbjct: 904 ENWQAGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINGKNGTISLLGPLDVQAGSYQ 963
Query: 82 ------------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
LSS+ + + V D+ND +P F L YE ++ E + +V A+D
Sbjct: 964 IEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDK 1023
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYLERV 173
D G N + Y++ E NTGD + LD E Q Y+ V
Sbjct: 1024 DSGANGEIAYTIAE-------GNTGDAFGIFPDGQLYIKSELDRELQDRYVLMV 1070
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1724 AEVEITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTYTIISGA 1783
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ + LD E++ Y
Sbjct: 1784 DDSFRIDPESGDLIATRRLDRERRSKY 1810
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LSS+ +V + VTD+ND P FQ PY +P G V V TDAD G N+ ++YS+
Sbjct: 2446 LSSSTSVLVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSFVFAVTVTDADIGPNSELHYSL 2505
Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
G ++ VNI V D+ND +P F Q++ V Q G ++ + A D DEG N +V Y
Sbjct: 871 GTVTGDTMVNITVKDLNDNSPHFLQAIESVNVVENWQAGHSIFQAKAVDPDEGVNGMVLY 930
Query: 139 SV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
S+ P+++ F ++ G I LD + +E
Sbjct: 931 SLKQNPKNL-FAINGKNGTISLLGPLDVQAGSYQIE 965
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 70/164 (42%), Gaps = 35/164 (21%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD--EGGLS---------- 83
+ ATD DSG + Y ++ N +F++ +EH G + GGL
Sbjct: 497 ISATDGDSGLNANLRYSIVSGN--GLGWFHI---SEHSGLVTTGAAGGLDRELASQIVLN 551
Query: 84 ------------STATVNIRVTDINDKNPEF-QSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
S A + + + D+ND+ P F Q Y+ SV E G + + ATD D
Sbjct: 552 ISARDQGVHPKVSYAQLVVTLLDVNDEKPRFSQPEGYDVSVVENAPTGTELLMLRATDGD 611
Query: 130 EGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V +S+ E F +D +G + T +LD E+Q Y
Sbjct: 612 LGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFY 655
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
SS ++I V D+ND P F+ P+ + E + V A D D G N + Y +
Sbjct: 2649 FSSYEKLDITVLDVNDNAPIFKEDPFVSEILENLSPRKILTVSAVDKDSGPNGQLDYEIV 2708
Query: 142 E---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ F ++ TG+IR+ + LD EK Y+
Sbjct: 2709 NGNMENSFNINHATGEIRSVRPLDREKVSYYV 2740
Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N V Y + +
Sbjct: 1515 VTILVTDLNDNVPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEVEYEIINGDTDT 1574
Query: 146 FVVDANTGDIRTNKAL 161
F+VD +GD+R AL
Sbjct: 1575 FIVDRYSGDLRVASAL 1590
Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG + Y + N F++ P T E Q
Sbjct: 1329 RIGELVSSVTATDSDSGDNADLYYSITGTNNHGT--FSISPNTGSIFLAKKLDFETQSLY 1386
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G SST +V I V D ND P F S+ E G +V V A D
Sbjct: 1387 KLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVTAHD 1446
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + Y++ + +P F +D G I TN +D E L+
Sbjct: 1447 PDADINGQLSYTIIQQMPRGNHFTIDEVKGTIYTNAEIDREFANLF 1492
Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 68/174 (39%), Gaps = 20/174 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G V+Y + + ++ LD
Sbjct: 694 YFAHIKENEPGGSYITTVSATDPDLGTNGTVKYSISAGDRSRFQVNVQSGVISTRMALDR 753
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V I V D D P F + Y F V E G VG
Sbjct: 754 EEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFGQVAYSFVVFENVALGYHVG 813
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A+ D N + Y D F ++ TG + T +D E+Q Y +V
Sbjct: 814 SVSASTMDLNSN-ISYLITTGDQKGMFAINQVTGQLTTANVIDREEQSFYQLKV 866
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 5/123 (4%)
Query: 59 DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
++ S++NL H P +STA V+I + D+ND P F S P +PE
Sbjct: 2009 ESQSFYNL-VVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLS-PKLTYIPENTPID 2066
Query: 118 LAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
V + A+D D G N+ + Y++ P F + G++R LD E+ Y V
Sbjct: 2067 TVVFKAQASDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2126
Query: 176 ISK 178
K
Sbjct: 2127 TDK 2129
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNAVVYYSV 140
SS A++ I V DIND P F Y ++ E G V + ATD D G NA + YS+
Sbjct: 456 SSVASLVIFVNDINDHPPVFSQQVYRVNLSEEAPPGSYVSGISATDGDSGLNANLRYSI 514
>gi|354484251|ref|XP_003504303.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3
[Cricetulus griseus]
Length = 3288
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 57/176 (32%), Positives = 85/176 (48%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQ--GP 75
Y A R+ +++V ATD+D GLV Y ++ N+ +F +D T E Q P
Sbjct: 516 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRG--HFAIDSLTGEIQVVAP 573
Query: 76 I--------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ QD G ++T +I+V DIND P F S P++ SV E G
Sbjct: 574 LDFEAEREYVLRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIFVSTPFQVSVLENAPLG 633
Query: 118 LAVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+V + A DAD G+N+ + YS V D PFV+++ TG + + LD E + Y
Sbjct: 634 HSVIHIQAVDADHGENSRLEYSLTGVAPDTPFVINSATGWVSVSGPLDRESVEHYF 689
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 32/185 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN---NTDAASYFNLDPAT----- 70
Y R+ E G ++Q++ATD D+ + YR + + ++AA+ F +DP +
Sbjct: 404 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGSPAARSEAAAAFEIDPRSGLIST 463
Query: 71 ------EH------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH QG Q+ G S+T V+I V D ND P+F Y V
Sbjct: 464 SGRVDREHMESYELVVEASDQG--QEPGPRSATVRVHITVLDENDNTPQFSEKRYVAQVR 521
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E + V RV ATD D+ N +V+Y++ F +D+ TG+I+ LD+E ++
Sbjct: 522 EDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVVAPLDFEAERE 581
Query: 169 YLERV 173
Y+ R+
Sbjct: 582 YVLRI 586
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQG 74
+++Q+ ATD+D+ G V+Y N D F ++P + E
Sbjct: 945 SVLQISATDRDAHANGRVQYTF-QNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTA 1003
Query: 75 PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G L + ++ + V D+ND P F + +E V E G V ++ A D DEG
Sbjct: 1004 YAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDEG 1063
Query: 132 QNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE +Q Y+
Sbjct: 1064 PNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYV 1105
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V+I +TD N P FQS Y S+ E + G V + A+D D G+NA + Y + +++P
Sbjct: 810 VHINITDANTHRPVFQSAHYSVSMNEDRPVGSTVVVISASDDDVGENARITYLLEDNLPQ 869
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DAN+G I LDYE Q Y
Sbjct: 870 FRIDANSGAITLQAPLDYEDQVTY 893
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEH 72
S Y + +G T++ + A+D D G+ + Y L DN F +D A
Sbjct: 826 SAHYSVSMNEDRPVGSTVVVISASDDDVGENARITYLLEDN----LPQFRIDANSGAITL 881
Query: 73 QGPIQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQD 116
Q P+ E ++ T + R V D+ND P+F + Y V E
Sbjct: 882 QAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAP 941
Query: 117 GL-AVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ++ ATD D N V Y+ D F ++ +G +RT + LD E +Y
Sbjct: 942 PFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVY 999
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 29/180 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT------- 70
Y + + G +++V A D D G+ G + Y L N+ + F++DP +
Sbjct: 296 YQTLVPENEAAGTAVLRVVAQDPDPGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 355
Query: 71 --------EHQGPI--QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
H + QD G LS+T V + V D ND P F+ Y ++ E ++G
Sbjct: 356 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAHYRETLRENVEEG 415
Query: 118 LAVGRVHATDADEGQNAVVYY--------SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ ++ ATD D NA + Y F +D +G I T+ +D E + Y
Sbjct: 416 YPILQLRATDGDAPPNANLRYRFVGSPAARSEAAAAFEIDPRSGLISTSGRVDREHMESY 475
Score = 42.7 bits (99), Expect = 0.065, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 69/176 (39%), Gaps = 28/176 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI--------- 76
LG +++ ++A D D G+ +EY L D F ++ AT GP+
Sbjct: 632 LGHSVIHIQAVDADHGENSRLEYSLTGVAPDTP--FVINSATGWVSVSGPLDRESVEHYF 689
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDAD 129
+D G LS++A+V + V D+ND PEF Y + E + V T D
Sbjct: 690 FGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNE-DAAVGTSVVSVTAVD 748
Query: 130 EGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
N+ + Y + G + LDY KQ+ Y + V S A
Sbjct: 749 RDANSAISYQITGGNSRNRFAISTQGGVGLVTLALPLDY-KQERYFKLVLTASDRA 803
Score = 42.4 bits (98), Expect = 0.076, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVD 149
+++P+F Y+ VPE + G AV RV A D D G+ + YS+ + F +D
Sbjct: 286 NRHPQFPQYNYQTLVPENEAAGTAVLRVVAQDPDPGEAGRLVYSLAALMNSRSLELFSID 345
Query: 150 ANTGDIRTNKALDYEKQQLYLERV 173
+G IRT ALD E + + RV
Sbjct: 346 PQSGLIRTAAALDRESMERHYLRV 369
Score = 37.7 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 20/154 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPI- 76
+G + Q+ A D D G + Y++++ N + + +LD + I
Sbjct: 1048 VGSVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIV 1107
Query: 77 --QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFS--VPEGQDGLA---VGRVHATDAD 129
L S ATV++R+ D ND +P + F+ V D +GR+ A D D
Sbjct: 1108 VQATSAPLVSRATVHVRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPD 1167
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALD 162
+ + ++ VV+ +G++R ++ LD
Sbjct: 1168 VSDHLFYSFERGNELQLLVVNQTSGELRLSRKLD 1201
>gi|194874570|ref|XP_001973423.1| GG16079 [Drosophila erecta]
gi|190655206|gb|EDV52449.1| GG16079 [Drosophila erecta]
Length = 4446
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 80/166 (48%), Gaps = 29/166 (17%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL----- 82
+LG T+ ++A D+D G G + + +LD + D S F +DP +G +Q G L
Sbjct: 639 QLGETVAWIEAKDRDLGYNGKLVFAILDGDYD--SVFRIDP---DRGELQIIGYLDRERQ 693
Query: 83 -----------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
S++ + I + D+ND P Q F + E + G V +H
Sbjct: 694 NEYVLNITVYDLGNPTKSTSKMLPITILDVNDNRPVIQKTLATFRLTESARIGTVVHCLH 753
Query: 125 ATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
ATDAD G NA V Y++ + F V+A TG IR NK LD EKQ Y
Sbjct: 754 ATDADSGINAQVTYALSVECSDFTVNATTGCIRLNKQLDREKQDNY 799
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 75/176 (42%), Gaps = 28/176 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD------------------- 59
Y A + +L + +V A DKD G ++Y L+ N D
Sbjct: 2935 YRVSAPEDAQLNTLITKVHAMDKDFGVNRQIKYSLMGENHDYFKISKSTGIIRLDKSLDR 2994
Query: 60 -AASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDG 117
S FNL E G + L S ATV + + DIND PEF Y + E G
Sbjct: 2995 ETISLFNLTVKAEDCGVPK----LHSIATVAVNILDINDNPPEFSMRQYSCEILENATHG 3050
Query: 118 LAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
V +V+AT D G NA ++Y + E F +D+ TGD+ N LDYE + Y
Sbjct: 3051 TEVCKVYATSIDIGVNADIHYFIMSGNEQGKFKMDSTTGDLVLNATLDYEMSKFYF 3106
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 70/162 (43%), Gaps = 20/162 (12%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRL-------LDNNTDAASYFNLDPATEHQGP----- 75
+G + + ATD DSG V Y L N T N E Q
Sbjct: 744 RIGTVVHCLHATDADSGINAQVTYALSVECSDFTVNATTGCIRLNKQLDREKQDNYALHI 803
Query: 76 IQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEG 131
+GG LSS A V + V D+ND P F Y F V E G + + A D D G
Sbjct: 804 TAKDGGNPVLSSEALVYVLVDDVNDNAPVFGVQEYIFKVREDLPRGTVLAVIEAVDEDIG 863
Query: 132 QNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
NA + +S+ E+ F +D +TG IRT LDYE +Q++
Sbjct: 864 PNAEIQFSLKEETQDKELFRIDKHTGAIRTQGYLDYENKQVH 905
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 71/160 (44%), Gaps = 26/160 (16%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------------EH-- 72
V ++ +KA D D + Y ++ N YF +D T EH
Sbjct: 1063 VEIITLKAFDPDIDPNQTLTYNIVSGN--LVGYFEIDSKTGVIKTTERKLDRENQAEHIL 1120
Query: 73 QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
+ I D G LSST+ + + V DIND +PEF Y+ VP ++ +VHA D+D
Sbjct: 1121 EVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRVYKVQVPSSATVNQSIFQVHAIDSD 1180
Query: 130 EGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQ 166
G+N + YS+ F +D+ G I K LD + +
Sbjct: 1181 SGENGRITYSIKSGKGKNKFRIDSQRGHIHIAKPLDSDNE 1220
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPE 142
S+A V I V D+ND +P F+++ S+ E G V ++ A D D G+N+ + YS+
Sbjct: 486 SSAKVKISVQDMNDNDPIFENVNKVISINENNLAGSFVVKLTAKDRDSGENSYISYSIAN 545
Query: 143 --DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSY 183
+PF +D +G ++T LD+E + E + S + Y
Sbjct: 546 LNAVPFEIDHFSGIVKTTSLLDFETMKRNYELIIRASDWGLPY 588
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--F 146
I V DIND P F Y S PE Q + +VHA D D G N + YS+ + F
Sbjct: 2918 ITVNDINDNTPIFSMAQYRVSAPEDAQLNTLITKVHAMDKDFGVNRQIKYSLMGENHDYF 2977
Query: 147 VVDANTGDIRTNKALDYEKQQLY 169
+ +TG IR +K+LD E L+
Sbjct: 2978 KISKSTGIIRLDKSLDRETISLF 3000
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS 139
G+ + +++ + D+ND PE +S Y ++PE G + +++ATD D G NA + Y
Sbjct: 2172 GVYAEVVLSVSIMDVNDCYPEIESDIYNITIPENSSFGTQILKINATDKDSGANAKLSYY 2231
Query: 140 VPEDIP-------FVVDANTGDIRTNKALDYEKQQLY 169
+ E I F +D G++ LDYE+ + +
Sbjct: 2232 I-ESINGQNNSELFYIDVTDGNLYLKTPLDYEQVKYH 2267
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVY 137
+G ++ + ++V DIND P+F Y ++ E ++ + ++HATD DE + +
Sbjct: 1336 DGTFTTLTNLLVQVIDINDNPPQFAKDVYHVNISENIEEESVIMQLHATDRDEDKKLFYH 1395
Query: 138 YSVPED----IPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
+D F +D+ +G++ + LD+EK ++ VF+
Sbjct: 1396 LHATQDPSSLALFRIDSISGNVIVTQRLDFEKTAQHILIVFV 1437
Score = 43.1 bits (100), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 22/163 (13%)
Query: 33 LMQVKATDKDSGK------------FGLVEYRL--LDNNTDAASYFNLDPATEHQGPI-- 76
+MQ+ ATD+D K L +R+ + N + + +H +
Sbjct: 1378 IMQLHATDRDEDKKLFYHLHATQDPSSLALFRIDSISGNVIVTQRLDFEKTAQHILIVFV 1437
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
+D+G G + A + + V D ND +PEF + + VPE G + V A D D G N
Sbjct: 1438 KDQGAPGKRNYAKIIVNVHDHNDHHPEFTAKIIQSKVPESAAIGSKLAEVRAIDRDSGHN 1497
Query: 134 AVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
A + YS+ F +D G I L+ K Q Y+ +V
Sbjct: 1498 AEIQYSIITGNVGSVFEIDPTFGVITLAGNLNINKIQEYMLQV 1540
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LS+ A VNI + DIND +P+F Y +V E G + + ATD D N +V Y++
Sbjct: 3119 LSNNAYVNISILDINDNSPKFLQNLYRVNVNEDIFVGSKILDIKATDEDSDINGLVTYNI 3178
Query: 141 P--EDI-PFVVDANTGDIRTNKALDYE 164
++I F +D G I ++ LD E
Sbjct: 3179 EKGDNIGQFSIDPKNGTISVSRPLDRE 3205
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 20/155 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y ++ DK +L KA +K G F + R NN N + E+ ++
Sbjct: 99 YRIISGDKEKL------FKAEEKLVGDFAFLAIRTRTNNV----VLNREKTEEYVIRVKA 148
Query: 79 EGGL--------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
L + A ++I+V D ND +P F Y +PE ++ +V A DAD
Sbjct: 149 HVHLHDRNISSYETEANIHIKVLDRNDLSPLFYPTQYTVVIPEDTPKYQSILKVTADDAD 208
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDY 163
G N +YYS+ D F + TG+I + L Y
Sbjct: 209 LGINGEIYYSLLIDSEYFAIHPTTGEITLLQQLQY 243
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 37 KATDKDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQGPIQD----EGGL 82
KA DKD +EY++ +D T S N+ T+ + + +G
Sbjct: 2324 KAYDKDISDTDSLEYKIVYGNELQTYSIDQLTGVISLQNMLNFTDKSSTVLNISVSDGVH 2383
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS-V 140
++ A + I + N +P+F YE VPE G + V A+D D G A +YY V
Sbjct: 2384 TTYARLKISLLPENVYSPQFDQNTYEVQVPENLLHGHNIITVKASDGDFGTYASLYYEIV 2443
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLYL 170
E++ F++D +TG I + D EK+ Y+
Sbjct: 2444 SEEMKKIFLIDQSTGVITSKVTFDREKKDEYV 2475
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 63/166 (37%), Gaps = 24/166 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
+Y ++ D + G +MQVKA D DS + G V Y L N F LD T Q
Sbjct: 1997 YYATVSIDDPK-GTIIMQVKAVDLDSAENGEVRYELKKGN---GELFKLDRKTGELSIKQ 2052
Query: 78 DEGG------------------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
G SS A + ++V D P F+ Y SV E + +
Sbjct: 2053 HVEGHNRNYELTVAAYDGAITPCSSEAPLQVKVID--RSMPVFEKQFYTVSVKEDVEMYS 2110
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEK 165
V +++Y + F +D NTG I LDYEK
Sbjct: 2111 ALSVSIEAESPLGRSLIYTISSDSQSFEIDYNTGSIFVVNELDYEK 2156
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 50/129 (38%), Gaps = 22/129 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------------ 70
+G ++ +KATD+DS GLV Y + D F++DP
Sbjct: 3154 VGSKILDIKATDEDSDINGLVTYNI--EKGDNIGQFSIDPKNGTISVSRPLDRETIPHYT 3211
Query: 71 -EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
E Q Q ++ +NI + D ND P F S Y + E + G TDA
Sbjct: 3212 LEIQACDQGNPQRCNSVPININILDTNDNAPIFSSANYSVVLQENRPLGYVFLTFKITDA 3271
Query: 129 DEGQNAVVY 137
DE N Y
Sbjct: 3272 DESPNTTPY 3280
Score = 38.9 bits (89), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG-LAVGRVHATDADEGQNAVVYYSVPEDI 144
A V I V D ND P+F + Y SV E + +++ +V ATDAD G N + Y + D
Sbjct: 2696 ADVLIDVRDENDNYPKFDNTFYSASVAENSEKVISLVKVSATDADTGPNGDIRYYLESDT 2755
Query: 145 P-----FVVDANTGDIRTNKALDYEKQQLYLERVF 174
F +D +G I +LD E Q Y +V
Sbjct: 2756 ENIQNIFDIDIYSGWITLLTSLDREVQSEYNFKVI 2790
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 77/182 (42%), Gaps = 45/182 (24%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYR----------------------LLDNNTDAASYFNLD 67
G ++++ A D+DSG+ + Y LLD T +Y +
Sbjct: 520 GSFVVKLTAKDRDSGENSYISYSIANLNAVPFEIDHFSGIVKTTSLLDFETMKRNYELII 579
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQ----------SLP-----YEFSVP 112
A++ P + + + ++I V DIND P+F+ S P +E S+
Sbjct: 580 RASDWGLPYRRQTEIK----LSIVVKDINDNRPQFERVNCYGKVTKSAPMGTEVFELSIN 635
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQL 168
E Q G V + A D D G N + +++ + D F +D + G+++ LD E+Q
Sbjct: 636 ESVQLGETVAWIEAKDRDLGYNGKLVFAILDGDYDSVFRIDPDRGELQIIGYLDRERQNE 695
Query: 169 YL 170
Y+
Sbjct: 696 YV 697
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 20/113 (17%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------ 68
D+ FY A + E ++L++V ATD D+G G + Y L + + + F++D
Sbjct: 2713 DNTFYSASVAENSEKVISLVKVSATDADTGPNGDIRYYLESDTENIQNIFDIDIYSGWIT 2772
Query: 69 -ATEHQGPIQDEGGLSSTAT------------VNIRVTDINDKNPEFQSLPYE 108
T +Q E A V I++ D ND P F+ LP E
Sbjct: 2773 LLTSLDREVQSEYNFKVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFK-LPIE 2824
Score = 35.8 bits (81), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 14/101 (13%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVH----------ATDADEG 131
SS + I + D ND P F Y ++ E G V +V+ DAD G
Sbjct: 1649 SSCQNIIIHILDANDNIPYFVQNEYVGALSESASIGSYVLKVYDSSKDHLTLQVKDADVG 1708
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
N +V Y + +D+ F +D+ TG I + LDYE Y
Sbjct: 1709 VNGMVEYHIIDDLAKQFFKIDSTTGAIELLRQLDYETNAGY 1749
>gi|119585318|gb|EAW64914.1| cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog,
Drosophila) [Homo sapiens]
Length = 3037
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 84/176 (47%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGP 75
Y A R+ +++V ATD+D GLV Y ++ N+ +F +D T + P
Sbjct: 275 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRG--HFAIDSLTGEIQVVAP 332
Query: 76 I--------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ QD G ++T +I+V DIND P F S P++ SV E G
Sbjct: 333 LDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSVLENAPLG 392
Query: 118 LAVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+V + A DAD G+NA + YS V D PFV+++ TG + + LD E + Y
Sbjct: 393 HSVIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATGWVSVSGPLDRESVEHYF 448
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQG 74
+++Q+ ATD+D+ G V+Y N D F ++P + E
Sbjct: 704 SVLQISATDRDAHANGRVQY-TFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTA 762
Query: 75 PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G L + ++ + V D+ND P F + +E V E G V ++ A D DEG
Sbjct: 763 YAVDRGVPPLRTPVSIQVMVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDEG 822
Query: 132 QNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE +Q Y+
Sbjct: 823 PNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYV 864
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 32/185 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPAT----- 70
Y R+ E G ++Q++ATD D+ + YR + AA+ F +DP +
Sbjct: 163 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLIST 222
Query: 71 ------EH------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH QG Q+ G S+T V+I V D ND P+F Y V
Sbjct: 223 SGRVDREHMESYELVVEASDQG--QEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVR 280
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E + V RV ATD D+ N +V+Y++ F +D+ TG+I+ LD+E ++
Sbjct: 281 EDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVVAPLDFEAERE 340
Query: 169 YLERV 173
Y R+
Sbjct: 341 YALRI 345
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V+I +TD N P FQS Y SV E + G + + A+D D G+NA + Y + +++P
Sbjct: 569 VHINITDANTHRPVFQSAHYSVSVNEDRPMGSTIVVISASDDDVGENARITYLLEDNLPQ 628
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DA++G I LDYE Q Y
Sbjct: 629 FRIDADSGAITLQAPLDYEDQVTY 652
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 29/180 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT------- 70
Y + + G +++V A D D+G+ G + Y L N+ + F++DP +
Sbjct: 55 YQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 114
Query: 71 --------EH--QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
H + QD G LS+T V + V D ND +P F+ Y ++ E ++G
Sbjct: 115 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRENVEEG 174
Query: 118 LAVGRVHATDADEGQNAVVYY--------SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ ++ ATD D NA + Y F +D +G I T+ +D E + Y
Sbjct: 175 YPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESY 234
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEH 72
S Y + +G T++ + A+D D G+ + Y L DN F +D A
Sbjct: 585 SAHYSVSVNEDRPMGSTIVVISASDDDVGENARITYLLEDN----LPQFRIDADSGAITL 640
Query: 73 QGPIQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQD 116
Q P+ E ++ T + R V D+ND P+F + Y V E
Sbjct: 641 QAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAP 700
Query: 117 GL-AVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ++ ATD D N V Y+ D F ++ +G +RT + LD E +Y
Sbjct: 701 PFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVY 758
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 72/177 (40%), Gaps = 30/177 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGPI--------- 76
LG +++ ++A D D G+ +EY L D F ++ AT GP+
Sbjct: 391 LGHSVIHIQAVDADHGENARLEYSLTGVAPDTP--FVINSATGWVSVSGPLDRESVEHYF 448
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDA 128
+D G LS++A+V + V D+ND PEF Y + E G +V V A D
Sbjct: 449 FGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGTSVVSVTAVDR 508
Query: 129 DEGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
D N+ + Y + G + LDY KQ+ Y + V S A
Sbjct: 509 DA--NSAISYQITGGNTRNRFAISTQGGVGLVTLALPLDY-KQERYFKLVLTASDRA 562
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 99 NPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDAN 151
+P+F Y+ VPE + G AV RV A D D G+ + YS+ + F +D
Sbjct: 47 HPQFPQYNYQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQ 106
Query: 152 TGDIRTNKALDYEKQQLYLERV 173
+G IRT ALD E + + RV
Sbjct: 107 SGLIRTAAALDRESMERHYLRV 128
>gi|403254095|ref|XP_003919814.1| PREDICTED: protocadherin-16 [Saimiri boliviensis boliviensis]
Length = 3297
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 83/162 (51%), Gaps = 28/162 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGP- 75
G +++V A D D G G V Y L + +F++DP + E Q
Sbjct: 488 GSFVVRVTARDPDQGTNGQVTYSLAPGAH--SHWFSIDPTSGIITTAVSLDYELEPQPQL 545
Query: 76 --IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ +GGL +S+ATV++ + D+ND P+FQ Y S+PEG Q G +V ATDAD
Sbjct: 546 IVVATDGGLPSLASSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDAD 605
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEK 165
G ++ YS+ + PF +DA++GD+ T + LD ++
Sbjct: 606 SGPFGLLSYSLGAGLGASGSPPFRIDAHSGDVCTTRTLDRDQ 647
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 30/178 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + R+ G +L+ ++ATD D G G V Y + + + F+LDP T
Sbjct: 1653 YSVLLRENSPPGTSLLTLRATDPDLGANGQVTYGGVSSES-----FSLDPDTGVLKTLRA 1707
Query: 71 ---EHQGPI------QDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQDGLA 119
E Q I QD G V +RV D ND P F S VPEGQD
Sbjct: 1708 LDREEQEEINLTVYAQDRGSPPQLTHVTVRVAVEDENDHAPTFGSAHLSLEVPEGQDPQT 1767
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQ---QLYLE 171
+ + A+D D G N + Y + + P FV+D +G+ T + LD E + QL +E
Sbjct: 1768 LTMLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQLKIE 1825
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL---------------DPATEHQGPI 76
TL ++A+D D G G ++YR+LD + A +L +PA + +
Sbjct: 1767 TLTMLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQLKIEA 1826
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQN 133
+D G LS+T V + V D ND P F Y VPE G + ++ A D D G N
Sbjct: 1827 RDGGQPALSATLLVTVIVLDANDHAPAFPVPAYSVEVPEDVPAGTLLLQLQAHDPDAGAN 1886
Query: 134 AVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSYL 184
V Y + F+++ ++G++RT ALD E+ Y V + A L
Sbjct: 1887 GRVTYYLGAGTAGAFLLEPSSGELRTAAALDREQCPSYTFSVSAVDGAAAGPL 1939
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 21/147 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNT--DAASYFNLDPAT-----------EHQGPI 76
G + + A D D+G FG + Y LL+ + F L+ +T EH
Sbjct: 2721 GTLVTTLHAIDGDAGAFGRLRYSLLEAGPGPEGREAFALNSSTGELRARMPFDYEHTESF 2780
Query: 77 Q------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ D G LS++ TV++ VT ++ +P F + + F VPEG + G ++G V ATD D
Sbjct: 2781 RLLVGAADAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQVPEGARRGHSLGHVQATDED 2840
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDI 155
G + +V YS+ P F ++ TG +
Sbjct: 2841 GGADGLVLYSLATSSPYFGINQTTGAL 2867
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 64/146 (43%), Gaps = 26/146 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY--------------RLLDNNTDAASY 63
FY A + + G +QV ATD DSG FGL+ Y R+ ++ D +
Sbjct: 581 FYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGASGSPPFRIDAHSGDVCTT 640
Query: 64 FNLDPATEHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEG 114
LD QGP D GGL S V + ++D ND P+F Y S+ +
Sbjct: 641 RTLD---RDQGPSSFDFTVTAVDGGGLKSMVYVKVFLSDENDNPPQFYPREYATSLSAQS 697
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV 140
G AV RV A D D+G + + Y +
Sbjct: 698 PPGTAVLRVRAHDPDQGSHGRLSYHI 723
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 72/165 (43%), Gaps = 24/165 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDA---ASYFNLDPATEHQGP 75
+G L+ V+A+D D G GLV + + LD N+ A + + HQ
Sbjct: 2616 VGAELLHVEASDADPGPHGLVHFAVSSGDPSGLFELDENSGTLRLAHALDCETQARHQLV 2675
Query: 76 IQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEG 131
+Q G + A V I V D+ND P F S+ E Q G V +HA D D G
Sbjct: 2676 VQAADPAGAHFALAPVTIEVQDVNDHGPAFPLNLLSTSLAENQPPGTLVTTLHAIDGDAG 2735
Query: 132 QNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYEKQQLY 169
+ YS+ E P F ++++TG++R DYE + +
Sbjct: 2736 AFGRLRYSLLEAGPGPEGREAFALNSSTGELRARMPFDYEHTESF 2780
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYFN-LDP----------- 68
G + V A D D G+ V YRL L ++T A S LD
Sbjct: 1560 GPAALHVVARDPDLGEAARVSYRLASGGDGHFRLHSSTGALSVVRPLDRERRAEHVLTVV 1619
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
A++H P + S+T + + V D+ND+ P FQ Y + E G ++ + ATD
Sbjct: 1620 ASDHGSPPR-----SATQVLTVSVADVNDEAPTFQQQEYSVLLRENSPPGTSLLTLRATD 1674
Query: 128 ADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQ 167
D G N V Y F +D +TG ++T +ALD E+Q+
Sbjct: 1675 PDLGANGQVTYGGVSSESFSLDPDTGVLKTLRALDREEQE 1714
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A +++ + DIND P F Y V E G V +V A+DAD G N V Y +
Sbjct: 238 ALLDVTLLDINDHAPAFNQSRYHAVVSESLAPGSPVLQVFASDADAGANGAVTYEINRRQ 297
Query: 143 ---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D PF +DA+TG +R + LD+E+++++
Sbjct: 298 SEGDGPFSIDAHTGLLRLERPLDFEQRRVH 327
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 32/167 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQ----- 73
G ++QV+A D G + Y L A+S F L+P + E Q
Sbjct: 1015 GTQVLQVQAQAPDGGP---ITYHLAAEA--ASSPFGLEPQSGWLWVRAALDREAQELYTL 1069
Query: 74 ------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
G + G + TAT+ + + + N+ +P P +V E Q G +VGRV AT
Sbjct: 1070 KVMAVSGSKAELGQQTGTATLRVSILNQNEHSPRLSEDPTFLAVAENQPPGTSVGRVFAT 1129
Query: 127 DADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
D D G N + YS+ + F + TG++ T + LD E+Q Y
Sbjct: 1130 DRDSGPNGRLTYSLQQLSEDSKAFRIHPQTGEVTTLQTLDREQQSSY 1176
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 73/165 (44%), Gaps = 26/165 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGPI--- 76
G +++V+A D D G G + Y +L N+ A F LD P +
Sbjct: 700 GTAVLRVRAHDPDQGSHGRLSYHILAGNSPA--LFALDEQSGLLTVAWPLARRANSVVQL 757
Query: 77 ----QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
QD GGL + +A VNI + P F+ L Y FSVPE G +VG V A +
Sbjct: 758 EIGAQDGGGLQAEPSARVNISIVPGTPTPPIFEQLQYVFSVPEDVAPGTSVGIVQAHNP- 816
Query: 130 EGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
G+ A V ++ P F +DA +G ++T LD E LE
Sbjct: 817 PGRLAPVTLALSGGDPRGLFSLDAVSGLLQTLCPLDRELLGPVLE 861
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 78/172 (45%), Gaps = 35/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G ++ +V ATD+DSG G + Y L + D+ + F + P T E Q
Sbjct: 1120 GTSVGRVFATDRDSGPNGRLTYSLQQLSEDSKA-FRIHPQTGEVTTLQTLDREQQSSYQL 1178
Query: 76 ---IQDEGG--LSSTATVNIRVTDINDKNPEF--------QSLPYEF--SVPEGQDGLAV 120
+QD G S+T TV++ V D+ND +P F LP + VP G V
Sbjct: 1179 LVQVQDGGSPSRSTTGTVHVAVLDLNDNSPTFLQASGAAGGGLPIQVPDRVPPGT---LV 1235
Query: 121 GRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ A D DEG+N + Y++ P F + ++G++ T L ++ Y+
Sbjct: 1236 TTLQAKDPDEGENGTILYTLTGPGSELFSLHPHSGELLTAAPLIRAERPHYV 1287
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 70/172 (40%), Gaps = 29/172 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH----------QGPI--- 76
G + ++A D DSG V + LL A F +DP T H GP
Sbjct: 909 GTPIYTLRALDPDSGVNSRVTFTLLAGGGGA---FTVDPTTGHVRLMRPLGPSGGPAHEL 965
Query: 77 ----QDEGGLSSTATVNIRVT--DINDKN--PEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
+D G T+ +RV D+ + P F S Y +P G G V +V A
Sbjct: 966 ELEARDGGSPPRTSHFRLRVVVQDVGTRGLAPRFDSPTYRVDLPSGTIPGTQVLQVQAQA 1025
Query: 128 ADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D G + Y+ E PF ++ +G + ALD E Q+LY +V +S
Sbjct: 1026 PDGGP--ITYHLAAEAASSPFGLEPQSGWLWVRAALDREAQELYTLKVMAVS 1075
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 73/178 (41%), Gaps = 40/178 (22%)
Query: 30 GVTLMQVKATDKDSGK-FGLVEYRLLDNNTDAASYFNLDP----ATEHQGPIQDEGGL-- 82
G TL+ ++ATD D + V+Y ++ N F L+P A E GP G
Sbjct: 2497 GSTLLTLEATDADGSRTHAAVDYSIVSGNR--GQVFQLEPRLAEAGEGSGPGPRALGCLV 2554
Query: 83 ---------------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
SS V + V D+ND P F Y +VPE
Sbjct: 2555 LLESLDFESLTQYNLTVAAADRGQPPRSSVVPVTVTVLDVNDNPPVFTQASYRVAVPEDT 2614
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
G + V A+DAD G + +V+++V P F +D N+G +R ALD E Q +
Sbjct: 2615 PVGAELLHVEASDADPGPHGLVHFAVSSGDPSGLFELDENSGTLRLAHALDCETQARH 2672
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------- 68
Y M + G ++ V ATD+DSG G + Y L A F +DP
Sbjct: 2379 LYQVMLLEHTPPGSAILSVSATDRDSGANGHISYHL----ASPADGFTVDPNNGTLFTIV 2434
Query: 69 ---ATEHQGP--------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG- 114
A H+G +D G G ++ ATV++++ D ND P F Y +V E
Sbjct: 2435 ETVALGHEGSGAVDVVLEARDHGAPGRAARATVHVQLQDQNDHAPSFTLPHYRVAVTEDL 2494
Query: 115 QDGLAVGRVHATDADEGQ-NAVVYYSV 140
G + + ATDAD + +A V YS+
Sbjct: 2495 PPGSTLLTLEATDADGSRTHAAVDYSI 2521
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 30/158 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPI--- 76
G L+Q++A D D+G G V Y L A F L+P++ Q P
Sbjct: 1870 GTLLLQLQAHDPDAGANGRVTYYL---GAGTAGAFLLEPSSGELRTAAALDREQCPSYTF 1926
Query: 77 -------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-----GQDGLAVGRVH 124
G LS+T +V + V D+ND P F + P +P LA+ +
Sbjct: 1927 SVSAVDGAAAGPLSTTVSVTVTVRDVNDHAPTFPTSPLRLRLPRPGPSFSTPTLALATLR 1986
Query: 125 ATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKA 160
A D D G NA + Y + P VD+ TG+IR ++
Sbjct: 1987 AEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARS 2024
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 15/93 (16%)
Query: 82 LSSTATVNIRVTDINDKNPEF-------QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
L + A + VTD+ND P F + LP E ++P G V RV A D D+G N
Sbjct: 451 LRAEAAFVLHVTDVNDNAPAFDRQLYRPEPLP-EVALP----GSFVVRVTARDPDQGTNG 505
Query: 135 VVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
V YS+ F +D +G I T +LDYE
Sbjct: 506 QVTYSLAPGAHSHWFSIDPTSGIITTAVSLDYE 538
Score = 38.9 bits (89), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD-EGQNAVVYYSVPEDIP 145
V +RV D N+ P F P ++PE + G A+ A+DAD G N+ V Y + P
Sbjct: 1421 VQVRVQDENEHAPTFARDPLALALPENPEPGAALYTFRASDADGPGPNSDVRYRLLRQEP 1480
Query: 146 FV----VDANTGDIRTNKALDYEKQQLYL 170
V +DA TG + + LD E L
Sbjct: 1481 PVPALRLDARTGALSAPRGLDRETTPALL 1509
Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 40/89 (44%), Gaps = 10/89 (11%)
Query: 72 HQGPIQDEGGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADE 130
H GP Q A + + V D+ND P F QSL + G A+ V ATD D
Sbjct: 2351 HDGPHQGH------ANLTVLVEDVNDNAPAFSQSLYQVMLLEHTPPGSAILSVSATDRDS 2404
Query: 131 GQNAVVYYSV--PEDIPFVVDANTGDIRT 157
G N + Y + P D F VD N G + T
Sbjct: 2405 GANGHISYHLASPADG-FTVDPNNGTLFT 2432
Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 67/171 (39%), Gaps = 34/171 (19%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI---- 76
AM R+ G ++ +A G G + Y +L N F++ P+T G I
Sbjct: 2074 AMIRENAPPGTLIVSPRAVHA-GGSNGPITYSILSGNEKGT--FSIQPST---GAITVRS 2127
Query: 77 -----------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ--DG 117
+ GG + + + + + D ND P F Y +PE + +G
Sbjct: 2128 AEGLDFEVSPRLRLVLQAESGGAFAFSVLTLTLQDANDNAPRFLRPHYVAFLPESRPFEG 2187
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYE 164
+ +V A D D+G + YS+ P F VD TG I T LD E
Sbjct: 2188 PLL-QVEADDLDQGSGGQISYSLAASQPARGLFHVDPATGIITTTAILDRE 2237
>gi|53830059|gb|AAU94938.1| anchor protein [Homo sapiens]
Length = 4186
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 84/176 (47%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGP 75
Y A R+ +++V ATD+D GLV Y ++ N+ +F +D T + P
Sbjct: 620 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRG--HFAIDSLTGEIQVVAP 677
Query: 76 I--------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ QD G ++T +I+V DIND P F S P++ SV E G
Sbjct: 678 LDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSVLENAPLG 737
Query: 118 LAVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+V + A DAD G+NA + YS V D PFV+++ TG + + LD E + Y
Sbjct: 738 HSVIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATGWVSVSGPLDRESVEHYF 793
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQG 74
+++Q+ ATD+D+ G V+Y N D F ++P + E
Sbjct: 1049 SVLQISATDRDAHANGRVQY-TFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTA 1107
Query: 75 PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G L + ++ + V D+ND P F + +E V E G V ++ A D DEG
Sbjct: 1108 YAVDRGVPPLRTPVSIQVMVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDEG 1167
Query: 132 QNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE +Q Y+
Sbjct: 1168 PNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYV 1209
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 32/185 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPAT----- 70
Y R+ E G ++Q++ATD D+ + YR + AA+ F +DP +
Sbjct: 508 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLIST 567
Query: 71 ------EH------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH QG Q+ G S+T V+I V D ND P+F Y V
Sbjct: 568 SGRVDREHMESYELVVEASDQG--QEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVR 625
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E + V RV ATD D+ N +V+Y++ F +D+ TG+I+ LD+E ++
Sbjct: 626 EDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVVAPLDFEAERE 685
Query: 169 YLERV 173
Y R+
Sbjct: 686 YALRI 690
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V+I +TD N P FQS Y SV E + G + + A+D D G+NA + Y + +++P
Sbjct: 914 VHINITDANTHRPVFQSAHYSVSVNEDRPMGSTIVVISASDDDVGENARITYLLEDNLPQ 973
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DA++G I LDYE Q Y
Sbjct: 974 FRIDADSGAITLQAPLDYEDQVTY 997
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 29/180 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT------- 70
Y + + G +++V A D D+G+ G + Y L N+ + F++DP +
Sbjct: 400 YQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 459
Query: 71 --------EH--QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
H + QD G LS+T V + V D ND +P F+ Y ++ E ++G
Sbjct: 460 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRENVEEG 519
Query: 118 LAVGRVHATDADEGQNAVVYY--------SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ ++ ATD D NA + Y F +D +G I T+ +D E + Y
Sbjct: 520 YPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESY 579
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEH 72
S Y + +G T++ + A+D D G+ + Y L DN F +D A
Sbjct: 930 SAHYSVSVNEDRPMGSTIVVISASDDDVGENARITYLLEDN----LPQFRIDADSGAITL 985
Query: 73 QGPIQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQD 116
Q P+ E ++ T + R V D+ND P+F + Y V E
Sbjct: 986 QAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAP 1045
Query: 117 GL-AVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ++ ATD D N V Y+ D F ++ +G +RT + LD E +Y
Sbjct: 1046 PFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVY 1103
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 72/177 (40%), Gaps = 30/177 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGPI--------- 76
LG +++ ++A D D G+ +EY L D F ++ AT GP+
Sbjct: 736 LGHSVIHIQAVDADHGENARLEYSLTGVAPDTP--FVINSATGWVSVSGPLDRESVEHYF 793
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDA 128
+D G LS++A+V + V D+ND PEF Y + E G +V V A D
Sbjct: 794 FGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGTSVVSVTAVDR 853
Query: 129 DEGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
D N+ + Y + G + LDY KQ+ Y + V S A
Sbjct: 854 DA--NSAISYQITGGNTRNRFAISTQGGVGLVTLALPLDY-KQERYFKLVLTASDRA 907
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 99 NPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDAN 151
+P+F Y+ VPE + G AV RV A D D G+ + YS+ + F +D
Sbjct: 392 HPQFPQYNYQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQ 451
Query: 152 TGDIRTNKALDYEKQQLYLERV 173
+G IRT ALD E + + RV
Sbjct: 452 SGLIRTAAALDRESMERHYLRV 473
>gi|405971222|gb|EKC36072.1| Protocadherin-11 X-linked [Crassostrea gigas]
Length = 1006
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 83/179 (46%), Gaps = 27/179 (15%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---- 70
D Y A + G + +V A+D D V Y + N S F +D +T
Sbjct: 461 DRDLYNATITENKAPGQMITKVTASDSDQENNAEVHYAIEPN---FRSKFEVDSSTGIIR 517
Query: 71 -------EHQGPIQ------DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
E + I D G L++TATV + + D ND+ P F Y F V E
Sbjct: 518 AKVEFDREQESSITFKVYAADNGTPVPLTATATVKLNIEDDNDEFPTFNKSSYNFQVMEN 577
Query: 115 QDG-LAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ VG V ATD D G NA + Y++P ++ PF ++ +TG+I+TN+ LD E + Y
Sbjct: 578 KNADFVVGTVLATDKDIGSNAAIVYTLPFSYQNAPFSINPSTGEIKTNRRLDREAKPSY 636
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 10/98 (10%)
Query: 76 IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+ +GGL SST T+N+ V DIND P F Y ++ E G + +V A+D D+G
Sbjct: 218 VAKDGGLPQRSSTMTINVAVQDINDNKPRFSYSQYNVTIQEDITVGTTIMKVSASDDDDG 277
Query: 132 QNAVVYY---SVP---EDIPFVVDANTGDIRTNKALDY 163
QN VV Y S P F ++ NTG+++ + L +
Sbjct: 278 QNGVVEYQFSSTPNGESQKLFSINNNTGEVKVIQQLTF 315
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 78/181 (43%), Gaps = 24/181 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-NTDAASYFNLDPATEHQGPIQ 77
Y ++ +G T+M+V A+D D G+ G+VEY+ N ++ F+++ T IQ
Sbjct: 252 YNVTIQEDITVGTTIMKVSASDDDDGQNGVVEYQFSSTPNGESQKLFSINNNTGEVKVIQ 311
Query: 78 -----------------DEG--GLSSTATVNIRVTDINDKNPEFQ-SLPYEFSVPEGQD- 116
D G LSS A +NI V D+N+ PE +L V E +
Sbjct: 312 QLTFTSGEPHRIVVSAIDHGFPALSSQAFINIHVVDVNNHAPEININLLSGGKVSESSNK 371
Query: 117 GLAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
G + V D D G+N V + P+ V+ + + LD E+ Y+ +V+
Sbjct: 372 GTVIAYVAVVDRDTGKNGQVKCKIIHPKFQLHVLSNTEYKVVVSDELDREENIEYIVKVY 431
Query: 175 L 175
Sbjct: 432 C 432
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 27/182 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
+L G + G + V D+D+GK G V+ +++ N TE++
Sbjct: 358 NLLSGGKVSESSNKGTVIAYVAVVDRDTGKNGQVKCKIIHPKFQLHVLSN----TEYKVV 413
Query: 76 IQDE-----------------GGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
+ DE G+ + + + ++V D ND P+F Y ++ E +
Sbjct: 414 VSDELDREENIEYIVKVYCEDDGIPKQNKSKSFIVQVLDTNDNEPKFDRDLYNATITENK 473
Query: 116 -DGLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLER 172
G + +V A+D+D+ NA V+Y++ + F VD++TG IR D E++ +
Sbjct: 474 APGQMITKVTASDSDQENNAEVHYAIEPNFRSKFEVDSSTGIIRAKVEFDREQESSITFK 533
Query: 173 VF 174
V+
Sbjct: 534 VY 535
Score = 35.8 bits (81), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 73/169 (43%), Gaps = 39/169 (23%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------------- 82
V ATDKD G + Y L + +A F+++P+T G I+ L
Sbjct: 587 VLATDKDIGSNAAIVYTLPFSYQNAP--FSINPST---GEIKTNRRLDREAKPSYTLSVM 641
Query: 83 ---------SSTATVNIRVTDINDKNPEFQSLPYE----FSVPEGQ-DGLAVGRVHATDA 128
+S+ TV + V D ND+ P + P VP V +V A D
Sbjct: 642 ATDRGVSPKNSSCTVTVTVLDENDEYPHIR-FPNRGNESIKVPHTTLPNSIVTQVEAYDK 700
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDI---RTNKALDYEKQQLYLE 171
DEG+N + YS+ +D F +DA TG I R ++ D ++ L+++
Sbjct: 701 DEGENGTLRYSIVKRDDDNLFYIDAKTGQIYLFRKIESFDIKEFSLFID 749
>gi|194757998|ref|XP_001961249.1| GF13772 [Drosophila ananassae]
gi|190622547|gb|EDV38071.1| GF13772 [Drosophila ananassae]
Length = 3584
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 83/185 (44%), Gaps = 28/185 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------- 68
S Y A + +G +++QV A+D D G G ++Y L D + + S F +DP
Sbjct: 1008 SPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLGDRDVEDGS-FVIDPTSGTIRT 1066
Query: 69 ---------ATEHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
A H I + G LSST V IR+ D+ND P F S VPE
Sbjct: 1067 NKGLDRESVAVYHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFPSDKITLYVPENSP 1126
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIR----TNKALDYEKQQL 168
G VG +HA D DEG NAVV+YS+ + F + G R T LDYE +
Sbjct: 1127 VGSVVGEIHAHDPDEGVNAVVHYSIIGGEDSNAFSLVTRPGSERAQLLTMTELDYESSRK 1186
Query: 169 YLERV 173
E V
Sbjct: 1187 RFELV 1191
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPATEH--- 72
Y A + +G T++ V ATD D G + Y L + N + F+++ T
Sbjct: 901 YSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINSQTGAIVT 960
Query: 73 QGPIQDE-------------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
P+ E GG LS T V I VTD+ND P F+S Y+ S+ E
Sbjct: 961 SAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDAL 1020
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G +V +V A+D D G N + Y + ED FV+D +G IRTNK LD E +Y
Sbjct: 1021 VGTSVIQVAASDPDVGLNGRIKYLLGDRDVEDGSFVIDPTSGTIRTNKGLDRESVAVY 1078
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 74/161 (45%), Gaps = 25/161 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------- 76
T+ ++ATD D G + Y ++ NT S F++D + +
Sbjct: 601 TVAHIRATDADQGNNAAIRYAIIGGNTQ--SQFSIDSMSGDVSLVKPLDYESVRSYRLVI 658
Query: 77 --QDEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
QD G S + T + V D ND P F + ++ SV E G + RV A D+DEG
Sbjct: 659 RAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEG 718
Query: 132 QNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
NA + YS+ E + P VD TG ++T K LD E+Q +
Sbjct: 719 ANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQARF 759
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 83/191 (43%), Gaps = 44/191 (23%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--------FNLDPAT 70
+ A R+ +G T++ ++ATD+D GK +EY + + TD F +D
Sbjct: 468 FEASIREGATVGSTVITLRATDQDIGKNAEIEYGI-EAVTDGGGLAQDQELPIFRID--- 523
Query: 71 EHQGPIQDEGGL-------------------------SSTATVNIRVTDINDKNPEFQSL 105
G I L ++TA+V ++V D ND P+F
Sbjct: 524 SRSGVISTRSSLDRETSDSYHLLVTAADMASAQSERRTATASVLVKVLDDNDNYPQFSER 583
Query: 106 PYEFSVPEGQDGLA----VGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTN 158
Y VPE Q G + V + ATDAD+G NA + Y++ F +D+ +GD+
Sbjct: 584 TYTVQVPEDQWGGSEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLV 643
Query: 159 KALDYEKQQLY 169
K LDYE + Y
Sbjct: 644 KPLDYESVRSY 654
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 56/102 (54%), Gaps = 9/102 (8%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG S TATV+I +TD N+ P F++ PY SV E G V V ATD+D G NA +
Sbjct: 872 DSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQI 931
Query: 137 YYSVPEDI--------PFVVDANTGDIRTNKALDYEKQQLYL 170
YS+ E+ PF +++ TG I T+ LD E YL
Sbjct: 932 TYSLNEESINGLGSPDPFSINSQTGAIVTSAPLDRETTSGYL 973
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
S T T+ + V D ND +P F++ +E S+ EG G V + ATD D G+NA + Y +
Sbjct: 444 SGTTTLQVNVLDCNDHSPSFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIE 503
Query: 142 -----------EDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+++P F +D+ +G I T +LD E Y
Sbjct: 504 AVTDGGGLAQDQELPIFRIDSRSGVISTRSSLDRETSDSY 543
Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 29/167 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP-- 75
+G +++V+A D D G + Y + + + + +DP T E Q
Sbjct: 703 VGYNIIRVQAYDSDEGANAEITYSISERDDNFP--LAVDPRTGWVQTIKPLDREEQARFA 760
Query: 76 ---IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDA 128
+ +GG+ S++++V I V D+ND +P F YE +V E Q G V V ATD
Sbjct: 761 FQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDP 820
Query: 129 DEGQNAVVYYSVPEDIP---FVVDANTGD--IRTNKALDYEKQQLYL 170
DE ++ ++Y + F + + G I ++LDY++++ ++
Sbjct: 821 DE--DSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFV 865
>gi|119625608|gb|EAX05203.1| FAT tumor suppressor homolog 4 (Drosophila) [Homo sapiens]
Length = 4929
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 83/170 (48%), Gaps = 22/170 (12%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL++Y + N + A + +
Sbjct: 3045 ATIPESHSIGSIVRTVSARDRDAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYE 3104
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
+H+ I D G ++ T +V + V D+ND +P F S Y +V E G V
Sbjct: 3105 LCQKHEMTISAIDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIH 3164
Query: 123 VHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y+V D+ FV+D NTG I T LD+E +Q Y
Sbjct: 3165 LNATDADSGTNAVIAYTVQSSDSDL-FVIDPNTGVITTQGFLDFETKQSY 3213
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F +DP + E +
Sbjct: 1756 GSKIMQLTAMDADEGANALVTYTIISGADDS---FRIDPESGDLIATRRLDRERRSKYSL 1812
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQ 132
D+G SS +NI V+D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1813 LVRADDGLQSSDMRINITVSDVNDHTPKFSRPVYSFDIPEDTIPGSLVAAILATDDDSGV 1872
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG + LDYE QQ Y+ V
Sbjct: 1873 NGEITYIVNEDDEDGIFFLNPITGVFNLTRLLDYEVQQYYILTV 1916
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 76/162 (46%), Gaps = 23/162 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI----QDEGGL--- 82
G L+ ++ATD D G G V + L + TD S F LDP + I ++E
Sbjct: 599 GTELLMLRATDGDLGDNGTVRFSLQEAETDRRS-FRLDPVSGRLSTISSLDREEQAFYSL 657
Query: 83 ------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
SS A +N+ + DIND +P F + Y + E + G + + V ATD D
Sbjct: 658 LVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKENEPGGSYITTVSATDPD 717
Query: 130 EGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V YS+ + F V+A +G I T ALD E++ Y
Sbjct: 718 LGTNGTVKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAY 759
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 22/167 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y ++D A+ F ++P+T
Sbjct: 2723 SQIFSAHVPENSPLGYTVTRVTTSDEDIGINAISRYSIMD----ASLPFTINPSTGDIVI 2778
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V I VTDIND P F Y PE + G
Sbjct: 2779 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNAPRFSRTSYYLDCPELTEIGS 2838
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
V +V ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 2839 KVTQVFATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQILKYQ 2885
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 75/173 (43%), Gaps = 21/173 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN------TDAASY-------- 63
FY A + +++V A+D D G GL+ Y ++ N D+ S
Sbjct: 1214 FYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEERQFAIDSTSGQVTLIGKL 1273
Query: 64 -FNLDPATEHQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
+ PA D G L+ST T+NI + D ND P F V E + G
Sbjct: 1274 DYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGEL 1333
Query: 120 VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD+D G NA +YYS+ F + NTG I K LD+E Q LY
Sbjct: 1334 VSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGSIFLAKKLDFETQSLY 1386
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 75/156 (48%), Gaps = 18/156 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPIQ---- 77
T++QV A D D G + Y L N D A + LD T+ + +
Sbjct: 2225 TILQVVARDDDRGSNSKLSYVLFGGNEDNAFTLSASGELGVTQSLDRETKERFVLMITAT 2284
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNA 134
D G L+ T T+N+ V D+ND P F S Y ++PE G V V+A+DAD +NA
Sbjct: 2285 DSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIPEDAPTGTDVLLVNASDADASKNA 2344
Query: 135 VVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V+ Y + + F ++ +TG I T+ LD E + Y
Sbjct: 2345 VISYRIIGGNSQFTINPSTGQIITSALLDRETKDNY 2380
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 24/162 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V A DKDSG G ++Y +++ N + + F+++ AT ++
Sbjct: 2636 ILTVSAMDKDSGPNGQLDYEIVNGNMENS--FSINHATGEIRSVRPLDREKVSHYVLTIK 2693
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G S + +V I + D ND P F + + VPE G V RV +D D G
Sbjct: 2694 SSDKGSPSQSTSVKVMINILDENDNAPRFSQI-FSAHVPENSPLGYTVTRVTTSDEDIGI 2752
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA+ YS+ + +PF ++ +TGDI ++ L+ E Y RV
Sbjct: 2753 NAISRYSIMDASLPFTINPSTGDIVISRPLNREDTDRYRIRV 2794
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 38 ATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGGLSSTAT--- 87
ATD D G G+ YR++ N A F LD G + +GGL T
Sbjct: 159 ATDSDIGSNGVDHRSYRIIRGN--EAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQY 216
Query: 88 -------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
VN+ V DIND P F S Y+ VPE G +V +V A D
Sbjct: 217 QLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAAD 276
Query: 128 ADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ADEG NA + Y + E PF +D TG I + LD+E ++ Y
Sbjct: 277 ADEGTNADIRYRLQDEGTPFQMDPETGLITVREPLDFEARRQY 319
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +ATD DSG +EY LL+ + S +D G + D
Sbjct: 2016 VFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATD 2075
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y+ + E G + +V A D DEG N
Sbjct: 2076 KGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQ 2135
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y + + F +D+ TG I K LD EK Y
Sbjct: 2136 VRYGIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTY 2172
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF---NLDPAT 70
D L Y + + +V+A+DKDSG G + Y + + NT DA F L +
Sbjct: 997 DQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGNTGDAFGIFPDGQLYIKS 1056
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E +QD LS+T V + + D+ND P F S Y F E Q G
Sbjct: 1057 ELDRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAG 1116
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
VG+V A D D G N V YS P F + A +G+I D E
Sbjct: 1117 SFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTHQFDRE 1164
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 76/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3159 GTTVIHLNATDADSGTNAVIAYTVQSSDSD---LFVIDPNT---GVITTQGFLDFETKQS 3212
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S ATVNI++ N+ P F S Y F + E G VG V A+
Sbjct: 3213 YHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFAS 3272
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F ++ TG I + LD EK+ ERV L
Sbjct: 3273 DRDLGTDGEVHYLIFGNSRKKGFQINKKTGQIYVSGILDREKE----ERVSL 3320
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L ATV++ + DIND P+F Y+ ++ E L V RV A+D DEG N +++YS+
Sbjct: 1190 LKDQATVHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSI 1249
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E+ F +D+ +G + LDYE Y
Sbjct: 1250 IKGNEERQFAIDSTSGQVTLIGKLDYEATPAY 1281
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 79/164 (48%), Gaps = 22/164 (13%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQG-- 74
++G L++V A D KD G VEY + LDN+T S + + +Q
Sbjct: 2946 KVGTKLIRVTAIDDKDFGLNSEVEYFISNDNHLGKFKLDNDTGWISVASSLISDLNQNFF 3005
Query: 75 ---PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D+G LSS ATV+I VT+ N PEF ++PE G V V A D
Sbjct: 3006 ITVTAKDKGNPPLSSQATVHITVTEENYHTPEFSQSHMSATIPESHSIGSIVRTVSARDR 3065
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
D N ++ YS+ E+ F ++++TG + KALDYE Q +
Sbjct: 3066 DAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYELCQKH 3109
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 71/174 (40%), Gaps = 32/174 (18%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPATEHQGPIQ 77
+ + G ++ Q KA D D G G+V Y L N N + L P H G Q
Sbjct: 904 ENWQAGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINEKNGTISLLGPLDVHAGSYQ 963
Query: 78 DE--------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
E LSS+ + + V D+ND +P F L YE ++ E + +V A+D
Sbjct: 964 IEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDK 1023
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYLERV 173
D G N + Y++ E NTGD + LD E Q Y+ V
Sbjct: 1024 DSGANGEIAYTIAE-------GNTGDAFGIFPDGQLYIKSELDRELQDRYVLMV 1070
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 31/135 (22%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G ++ V A+D D+ K ++ YR++ N S F ++P+T G I
Sbjct: 2327 GTDVLLVNASDADASKNAVISYRIIGGN----SQFTINPST---GQIITSALLDRETKDN 2379
Query: 77 -------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHA 125
D G LSS+ +V + VTD+ND P FQ PY +P G V V
Sbjct: 2380 YTLVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSFVFAVTV 2439
Query: 126 TDADEGQNAVVYYSV 140
TDAD G N+ ++YS+
Sbjct: 2440 TDADIGPNSELHYSL 2454
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 27/165 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGPI--- 76
G ++QV A D D G G V Y +++ NT+ F +D P + P
Sbjct: 2117 GTDIIQVFAADGDEGTNGQVRYGIVNGNTNQE--FRIDSVTGAITVAKPLDREKTPTYHL 2174
Query: 77 ----QDEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDA 128
D G + T+TV+I + DIND P F+ PY +VPE L + +V A D
Sbjct: 2175 TVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPENLGTLPRTILQVVARDD 2234
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D G N+ + Y + ED F + A +G++ ++LD E ++ ++
Sbjct: 2235 DRGSNSKLSYVLFGGNEDNAFTLSA-SGELGVTQSLDRETKERFV 2278
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1724 AEVEITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTYTIISGA 1783
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ + LD E++ Y
Sbjct: 1784 DDSFRIDPESGDLIATRRLDRERRSKY 1810
Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 70/164 (42%), Gaps = 35/164 (21%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--DEGGLS---------- 83
+ ATD DSG + Y ++ N +F++ +EH G + GGL
Sbjct: 497 ISATDGDSGLNANLRYSIVSGN--GLGWFHI---SEHSGLVTTGSSGGLDRELASQIVLN 551
Query: 84 ------------STATVNIRVTDINDKNPEF-QSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
S A + + + D+ND+ P F Q Y+ SV E G + + ATD D
Sbjct: 552 ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLMLRATDGD 611
Query: 130 EGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V +S+ E F +D +G + T +LD E+Q Y
Sbjct: 612 LGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFY 655
Score = 42.4 bits (98), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
G ++ VNI V D+ND +P F Q++ V Q G ++ + A D DEG N +V Y
Sbjct: 871 GTVTGDTMVNITVKDLNDNSPHFLQAIESVNVVENWQAGHSIFQAKAVDPDEGVNGMVLY 930
Query: 139 SV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
S+ P+++ F ++ G I LD +E
Sbjct: 931 SLKQNPKNL-FAINEKNGTISLLGPLDVHAGSYQIE 965
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
SS ++I V D+ND P F+ P+ + E + V A D D G N + Y +
Sbjct: 2598 FSSYEKLDITVLDVNDNAPIFKEDPFISEILENLSPRKILTVSAMDKDSGPNGQLDYEIV 2657
Query: 142 E---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ F ++ TG+IR+ + LD EK Y+
Sbjct: 2658 NGNMENSFSINHATGEIRSVRPLDREKVSHYV 2689
Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 68/174 (39%), Gaps = 20/174 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G V+Y + + ++ LD
Sbjct: 694 YFAHIKENEPGGSYITTVSATDPDLGTNGTVKYSISAGDRSRFQVNAQSGVISTRMALDR 753
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V I V D D P F + Y F V E G VG
Sbjct: 754 EEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFENVALGYHVG 813
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A+ D N + Y D F ++ TG + T +D E+Q Y +V
Sbjct: 814 SVSASTMDLNSN-ISYLITTGDQKGMFAINQVTGQLTTANVIDREEQSFYQLKV 866
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N + Y + +
Sbjct: 1515 VTILVTDLNDNVPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEIEYEIINGDTDT 1574
Query: 146 FVVDANTGDIRTNKAL 161
F+VD +GD+R AL
Sbjct: 1575 FIVDRYSGDLRVASAL 1590
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 55/123 (44%), Gaps = 5/123 (4%)
Query: 59 DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
++ S++NL H P +STA V+I + D+ND P F S P +PE
Sbjct: 1956 ESQSFYNL-VVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLS-PKLTYIPENTPID 2013
Query: 118 LAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
V + ATD D G N+ + Y++ P F + G++R LD E+ Y V
Sbjct: 2014 TVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2073
Query: 176 ISK 178
K
Sbjct: 2074 TDK 2076
Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG + Y + N F++ P T E Q
Sbjct: 1329 RIGELVSSVTATDSDSGDNADLYYSITGTNNHGT--FSISPNTGSIFLAKKLDFETQSLY 1386
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G SST +V I V D ND P F S+ E G +V V A D
Sbjct: 1387 KLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVTAHD 1446
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + Y++ + +P F +D G I TN +D E L+
Sbjct: 1447 PDADINGQLSYTIIQQMPRGNHFTIDEVKGTIYTNAEIDREFANLF 1492
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNAVVYYSV 140
SS A++ I V DIND P F Y ++ E G V + ATD D G NA + YS+
Sbjct: 456 SSVASLVIFVNDINDHPPVFSQQVYRVNLSEEAPPGSYVSGISATDGDSGLNANLRYSI 514
>gi|410036931|ref|XP_001146508.3| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Pan troglodytes]
Length = 3087
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 84/176 (47%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGP 75
Y A R+ +++V ATD+D GLV Y ++ N+ +F +D T + P
Sbjct: 550 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRG--HFAIDSLTGEIQVVAP 607
Query: 76 I--------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ QD G ++T +I+V DIND P F S P++ SV E G
Sbjct: 608 LDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSVLENAPLG 667
Query: 118 LAVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+V + A DAD G+NA + YS V D PFV+++ TG + + LD E + Y
Sbjct: 668 HSVIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATGWVSVSGPLDRESVEHYF 723
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQG 74
+++Q+ ATD+D+ G V+Y N D F ++P + E
Sbjct: 979 SVLQISATDRDAHANGRVQYTF-QNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTA 1037
Query: 75 PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G L + ++ + V D+ND P F + +E V E G V ++ A D DEG
Sbjct: 1038 YAVDRGVPPLRTPVSIQVMVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDEG 1097
Query: 132 QNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE +Q Y+
Sbjct: 1098 PNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYV 1139
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 32/185 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL---DNNTDAASYFNLDPAT----- 70
Y R+ E G ++Q++ATD D+ + YR + AA+ F +DP +
Sbjct: 438 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLIST 497
Query: 71 ------EH------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH QG Q+ G S+T V+I V D ND P+F Y V
Sbjct: 498 SGRVDREHMESYELVVEASDQG--QEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVR 555
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E + V RV ATD D+ N +V+Y++ F +D+ TG+I+ LD+E ++
Sbjct: 556 EDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVVAPLDFEAERE 615
Query: 169 YLERV 173
Y R+
Sbjct: 616 YALRI 620
Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V+I +TD N P FQS Y SV E + G + + A+D D G+NA + Y + +++P
Sbjct: 844 VHINITDANTHRPVFQSAHYSVSVNEDRPVGSTIVVISASDDDVGENARITYLLEDNLPQ 903
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DA++G I LDYE Q Y
Sbjct: 904 FRIDADSGAITLQAPLDYEDQVTY 927
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 29/180 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT------- 70
Y + + G +++V A D D+G+ G + Y L N+ + F++DP +
Sbjct: 330 YQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 389
Query: 71 --------EH--QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
H + QD G LS+T V + V D ND +P F+ Y ++ E ++G
Sbjct: 390 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRENVEEG 449
Query: 118 LAVGRVHATDADEGQNAVVYY--------SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ ++ ATD D NA + Y F +D +G I T+ +D E + Y
Sbjct: 450 YPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESY 509
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEH 72
S Y + +G T++ + A+D D G+ + Y L DN F +D A
Sbjct: 860 SAHYSVSVNEDRPVGSTIVVISASDDDVGENARITYLLEDN----LPQFRIDADSGAITL 915
Query: 73 QGPIQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQD 116
Q P+ E ++ T + R V D+ND P+F + Y V E
Sbjct: 916 QAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAP 975
Query: 117 GL-AVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ++ ATD D N V Y+ D F ++ +G +RT + LD E +Y
Sbjct: 976 PFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVY 1033
Score = 42.4 bits (98), Expect = 0.076, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 69/176 (39%), Gaps = 28/176 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI--------- 76
LG +++ ++A D D G+ +EY L D F ++ AT GP+
Sbjct: 666 LGHSVIHIQAVDADHGENARLEYSLTGVAPDTP--FVINSATGWVSVSGPLDRESVEHYF 723
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDAD 129
+D G LS++A+V + V D+ND PEF Y + E + V T D
Sbjct: 724 FGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNE-DAAVGTSVVSVTAVD 782
Query: 130 EGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
N+ + Y + G + LDY KQ+ Y + V S A
Sbjct: 783 RDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLDY-KQERYFKLVLTASDRA 837
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 99 NPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDAN 151
+P+F Y+ VPE + G AV RV A D D G+ + YS+ + F +D
Sbjct: 322 HPQFPQYNYQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQ 381
Query: 152 TGDIRTNKALDYEKQQLYLERV 173
+G IRT ALD E + + RV
Sbjct: 382 SGLIRTAAALDRESMERHYLRV 403
Score = 37.7 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 20/154 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPI- 76
+G + Q+ A D D G + Y++++ N + + +LD + I
Sbjct: 1082 VGSVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYVIV 1141
Query: 77 --QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFS--VPEGQDGLA---VGRVHATDAD 129
L S ATV+IR+ D ND +P + F+ V D +GR+ A D D
Sbjct: 1142 VQATSAPLVSRATVHIRLVDQNDNSPVLNNFQILFNNYVSNRSDTFPSGIIGRIPAYDPD 1201
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALD 162
+ + ++ VV+ +G++R ++ LD
Sbjct: 1202 VSDHLFYSFERGNELQLLVVNQTSGELRLSRKLD 1235
>gi|165932370|ref|NP_078858.4| protocadherin Fat 4 precursor [Homo sapiens]
gi|172046149|sp|Q6V0I7.2|FAT4_HUMAN RecName: Full=Protocadherin Fat 4; Short=hFat4; AltName:
Full=Cadherin family member 14; AltName: Full=FAT tumor
suppressor homolog 4; AltName: Full=Fat-like cadherin
protein FAT-J; Flags: Precursor
Length = 4981
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 83/170 (48%), Gaps = 22/170 (12%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL++Y + N + A + +
Sbjct: 3096 ATIPESHSIGSIVRTVSARDRDAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYE 3155
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
+H+ I D G ++ T +V + V D+ND +P F S Y +V E G V
Sbjct: 3156 LCQKHEMTISAIDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIH 3215
Query: 123 VHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y+V D+ FV+D NTG I T LD+E +Q Y
Sbjct: 3216 LNATDADSGTNAVIAYTVQSSDSDL-FVIDPNTGVITTQGFLDFETKQSY 3264
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F +DP + E +
Sbjct: 1756 GSKIMQLTAMDADEGANALVTYTIISGADDS---FRIDPESGDLIATRRLDRERRSKYSL 1812
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQ 132
D+G SS +NI V+D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1813 LVRADDGLQSSDMRINITVSDVNDHTPKFSRPVYSFDIPEDTIPGSLVAAILATDDDSGV 1872
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG + LDYE QQ Y+ V
Sbjct: 1873 NGEITYIVNEDDEDGIFFLNPITGVFNLTRLLDYEVQQYYILTV 1916
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 76/162 (46%), Gaps = 23/162 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI----QDEGGL--- 82
G L+ ++ATD D G G V + L + TD S F LDP + I ++E
Sbjct: 599 GTELLMLRATDGDLGDNGTVRFSLQEAETDRRS-FRLDPVSGRLSTISSLDREEQAFYSL 657
Query: 83 ------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
SS A +N+ + DIND +P F + Y + E + G + + V ATD D
Sbjct: 658 LVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKENEPGGSYITTVSATDPD 717
Query: 130 EGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V YS+ + F V+A +G I T ALD E++ Y
Sbjct: 718 LGTNGTVKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAY 759
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 22/167 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y ++D A+ F ++P+T
Sbjct: 2774 SQIFSAHVPENSPLGYTVTRVTTSDEDIGINAISRYSIMD----ASLPFTINPSTGDIVI 2829
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V I VTDIND P F Y PE + G
Sbjct: 2830 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNAPRFSRTSYYLDCPELTEIGS 2889
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
V +V ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 2890 KVTQVFATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQILKYQ 2936
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 75/173 (43%), Gaps = 21/173 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN------TDAASY-------- 63
FY A + +++V A+D D G GL+ Y ++ N D+ S
Sbjct: 1214 FYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEERQFAIDSTSGQVTLIGKL 1273
Query: 64 -FNLDPATEHQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
+ PA D G L+ST T+NI + D ND P F V E + G
Sbjct: 1274 DYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGEL 1333
Query: 120 VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD+D G NA +YYS+ F + NTG I K LD+E Q LY
Sbjct: 1334 VSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGSIFLAKKLDFETQSLY 1386
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 24/162 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V A DKDSG G ++Y +++ N + + F+++ AT ++
Sbjct: 2687 ILTVSAMDKDSGPNGQLDYEIVNGNMENS--FSINHATGEIRSVRPLDREKVSHYVLTIK 2744
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G S + +V I + D ND P F + + VPE G V RV +D D G
Sbjct: 2745 SSDKGSPSQSTSVKVMINILDENDNAPRFSQI-FSAHVPENSPLGYTVTRVTTSDEDIGI 2803
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA+ YS+ + +PF ++ +TGDI ++ L+ E Y RV
Sbjct: 2804 NAISRYSIMDASLPFTINPSTGDIVISRPLNREDTDRYRIRV 2845
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 38 ATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGGLSSTAT--- 87
ATD D G G+ YR++ N A F LD G + +GGL T
Sbjct: 159 ATDSDIGSNGVDHRSYRIIRGN--EAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQY 216
Query: 88 -------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
VN+ V DIND P F S Y+ VPE G +V +V A D
Sbjct: 217 QLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAAD 276
Query: 128 ADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ADEG NA + Y + E PF +D TG I + LD+E ++ Y
Sbjct: 277 ADEGTNADIRYRLQDEGTPFQMDPETGLITVREPLDFEARRQY 319
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 18/155 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPIQ---- 77
T++QV A D D G + Y L N D A + LD T+ + +
Sbjct: 2278 TILQVVARDDDRGSNSKLSYVLFGGNEDNAFTLSASGELGVTQSLDRETKERFVLMITAT 2337
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNA 134
D G L+ T T+N+ V D+ND P F S Y ++PE G V V+A+DAD +NA
Sbjct: 2338 DSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIPEDAPTGTDVLLVNASDADASKNA 2397
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V+ + + F ++ +TG I T+ LD E + Y
Sbjct: 2398 VIRI-IGGNSQFTINPSTGQIITSALLDRETKDNY 2431
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +ATD DSG +EY LL+ + S +D G + D
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATD 2128
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y+ + E G + +V A D DEG N
Sbjct: 2129 KGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQ 2188
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y + + F +D+ TG I K LD EK Y
Sbjct: 2189 VRYGIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTY 2225
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF---NLDPAT 70
D L Y + + +V+A+DKDSG G + Y + + NT DA F L +
Sbjct: 997 DQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGNTGDAFGIFPDGQLYIKS 1056
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E +QD LS+T V + + D+ND P F S Y F E Q G
Sbjct: 1057 ELDRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAG 1116
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
VG+V A D D G N V YS P F + A +G+I D E
Sbjct: 1117 SFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTHQFDRE 1164
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 76/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3210 GTTVIHLNATDADSGTNAVIAYTVQSSDSD---LFVIDPNT---GVITTQGFLDFETKQS 3263
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S ATVNI++ N+ P F S Y F + E G VG V A+
Sbjct: 3264 YHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFAS 3323
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F ++ TG I + LD EK+ ERV L
Sbjct: 3324 DRDLGTDGEVHYLIFGNSRKKGFQINKKTGQIYVSGILDREKE----ERVSL 3371
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L ATV++ + DIND P+F Y+ ++ E L V RV A+D DEG N +++YS+
Sbjct: 1190 LKDQATVHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSI 1249
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E+ F +D+ +G + LDYE Y
Sbjct: 1250 IKGNEERQFAIDSTSGQVTLIGKLDYEATPAY 1281
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 78/162 (48%), Gaps = 22/162 (13%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQG-- 74
++G L++V A D KD G VEY + LDN+T S + + +Q
Sbjct: 2997 KVGTKLIRVTAIDDKDFGLNSEVEYFISNDNHLGKFKLDNDTGWISVASSLISDLNQNFF 3056
Query: 75 ---PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D+G LSS ATV+I VT+ N PEF ++PE G V V A D
Sbjct: 3057 ITVTAKDKGNPPLSSQATVHITVTEENYHTPEFSQSHMSATIPESHSIGSIVRTVSARDR 3116
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQ 167
D N ++ YS+ E+ F ++++TG + KALDYE Q
Sbjct: 3117 DAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYELCQ 3158
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 71/174 (40%), Gaps = 32/174 (18%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPATEHQGPIQ 77
+ + G ++ Q KA D D G G+V Y L N N + L P H G Q
Sbjct: 904 ENWQAGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINEKNGTISLLGPLDVHAGSYQ 963
Query: 78 DE--------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
E LSS+ + + V D+ND +P F L YE ++ E + +V A+D
Sbjct: 964 IEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDK 1023
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYLERV 173
D G N + Y++ E NTGD + LD E Q Y+ V
Sbjct: 1024 DSGANGEIAYTIAE-------GNTGDAFGIFPDGQLYIKSELDRELQDRYVLMV 1070
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 27/165 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGPI--- 76
G ++QV A D D G G V Y +++ NT+ F +D P + P
Sbjct: 2170 GTDIIQVFAADGDEGTNGQVRYGIVNGNTNQE--FRIDSVTGAITVAKPLDREKTPTYHL 2227
Query: 77 ----QDEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDA 128
D G + T+TV+I + DIND P F+ PY +VPE L + +V A D
Sbjct: 2228 TVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPENLGTLPRTILQVVARDD 2287
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D G N+ + Y + ED F + A +G++ ++LD E ++ ++
Sbjct: 2288 DRGSNSKLSYVLFGGNEDNAFTLSA-SGELGVTQSLDRETKERFV 2331
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1724 AEVEITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTYTIISGA 1783
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ + LD E++ Y
Sbjct: 1784 DDSFRIDPESGDLIATRRLDRERRSKY 1810
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 33/135 (24%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G ++ V A+D D+ K ++ R++ N S F ++P+T G I
Sbjct: 2380 GTDVLLVNASDADASKNAVI--RIIGGN----SQFTINPST---GQIITSALLDRETKDN 2430
Query: 77 -------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHA 125
D G LSS+ +V + VTD+ND P FQ PY +P G V V
Sbjct: 2431 YTLVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSFVFAVTV 2490
Query: 126 TDADEGQNAVVYYSV 140
TDAD G N+ ++YS+
Sbjct: 2491 TDADIGPNSELHYSL 2505
Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 70/164 (42%), Gaps = 35/164 (21%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--DEGGLS---------- 83
+ ATD DSG + Y ++ N +F++ +EH G + GGL
Sbjct: 497 ISATDGDSGLNANLRYSIVSGN--GLGWFHI---SEHSGLVTTGSSGGLDRELASQIVLN 551
Query: 84 ------------STATVNIRVTDINDKNPEF-QSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
S A + + + D+ND+ P F Q Y+ SV E G + + ATD D
Sbjct: 552 ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLMLRATDGD 611
Query: 130 EGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V +S+ E F +D +G + T +LD E+Q Y
Sbjct: 612 LGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFY 655
Score = 42.4 bits (98), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
G ++ VNI V D+ND +P F Q++ V Q G ++ + A D DEG N +V Y
Sbjct: 871 GTVTGDTMVNITVKDLNDNSPHFLQAIESVNVVENWQAGHSIFQAKAVDPDEGVNGMVLY 930
Query: 139 SV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
S+ P+++ F ++ G I LD +E
Sbjct: 931 SLKQNPKNL-FAINEKNGTISLLGPLDVHAGSYQIE 965
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
SS ++I V D+ND P F+ P+ + E + V A D D G N + Y +
Sbjct: 2649 FSSYEKLDITVLDVNDNAPIFKEDPFISEILENLSPRKILTVSAMDKDSGPNGQLDYEIV 2708
Query: 142 E---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ F ++ TG+IR+ + LD EK Y+
Sbjct: 2709 NGNMENSFSINHATGEIRSVRPLDREKVSHYV 2740
Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 68/174 (39%), Gaps = 20/174 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G V+Y + + ++ LD
Sbjct: 694 YFAHIKENEPGGSYITTVSATDPDLGTNGTVKYSISAGDRSRFQVNAQSGVISTRMALDR 753
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V I V D D P F + Y F V E G VG
Sbjct: 754 EEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFENVALGYHVG 813
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A+ D N + Y D F ++ TG + T +D E+Q Y +V
Sbjct: 814 SVSASTMDLNSN-ISYLITTGDQKGMFAINQVTGQLTTANVIDREEQSFYQLKV 866
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N + Y + +
Sbjct: 1515 VTILVTDLNDNVPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEIEYEIINGDTDT 1574
Query: 146 FVVDANTGDIRTNKAL 161
F+VD +GD+R AL
Sbjct: 1575 FIVDRYSGDLRVASAL 1590
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 55/123 (44%), Gaps = 5/123 (4%)
Query: 59 DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
++ S++NL H P +STA V+I + D+ND P F S P +PE
Sbjct: 2009 ESQSFYNL-VVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLS-PKLTYIPENTPID 2066
Query: 118 LAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
V + ATD D G N+ + Y++ P F + G++R LD E+ Y V
Sbjct: 2067 TVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2126
Query: 176 ISK 178
K
Sbjct: 2127 TDK 2129
Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG + Y + N F++ P T E Q
Sbjct: 1329 RIGELVSSVTATDSDSGDNADLYYSITGTNNHGT--FSISPNTGSIFLAKKLDFETQSLY 1386
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G SST +V I V D ND P F S+ E G +V V A D
Sbjct: 1387 KLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVTAHD 1446
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + Y++ + +P F +D G I TN +D E L+
Sbjct: 1447 PDADINGQLSYTIIQQMPRGNHFTIDEVKGTIYTNAEIDREFANLF 1492
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNAVVYYSV 140
SS A++ I V DIND P F Y ++ E G V + ATD D G NA + YS+
Sbjct: 456 SSVASLVIFVNDINDHPPVFSQQVYRVNLSEEAPPGSYVSGISATDGDSGLNANLRYSI 514
>gi|432093130|gb|ELK25388.1| Protocadherin-16 [Myotis davidii]
Length = 3060
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 83/162 (51%), Gaps = 28/162 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGP- 75
G +++V A D D G G V Y L + +F++DP + E Q
Sbjct: 486 GSFVVRVTARDPDQGTNGQVTYSLAPGSH--TRWFSIDPTSGIITTAASLDYELEPQPQL 543
Query: 76 --IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ +GGL +S+ATV++ + D+ND P+FQ Y S+PEG Q G +V ATDAD
Sbjct: 544 IVVATDGGLPPLTSSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDAD 603
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEK 165
G ++ YS+ + PF +DA++GD+ T + LD ++
Sbjct: 604 SGPFGLLSYSLGAGLGASGSPPFRIDAHSGDVCTTQTLDRDQ 645
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 27/177 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + R+ G +L+ ++ATD D G G V Y + + F+LDP T
Sbjct: 1431 YSVLLRENSPPGTSLLTLRATDPDLGANGQVTYGGISGES-----FSLDPDTGVLTTLRA 1485
Query: 71 ---EHQGPI------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
E Q I +D G L + TV + V D ND P F S VPEGQD
Sbjct: 1486 LDREEQEEINLTVYARDRGSPPLLTHVTVRVAVEDENDHAPAFGSAHLSLEVPEGQDPQT 1545
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ + A+D D G N + Y + + P FV+D +G+ T + LD E + + R+
Sbjct: 1546 LTTLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQLRI 1602
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 22/161 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT--DAASYFNLDPAT--- 70
SL ++A ++ G + + A D D+G FG + Y LL+ + F L+ +T
Sbjct: 2486 SLLSTSLAENQPP-GTLVTTLHAIDGDAGAFGRLHYTLLEAGPGPEGREAFALNSSTGEL 2544
Query: 71 --------EHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
EH G Q D G LS++ TV++ VT ++ +P F + + F VPEG +
Sbjct: 2545 RARVAFDYEHTGSFQLLVGAADAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQVPEGAR 2604
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDI 155
G ++G V ATD D G + +V YS+ P F ++ TG +
Sbjct: 2605 RGHSLGHVQATDEDGGADGLVLYSLATSSPYFGINQTTGAL 2645
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 74/162 (45%), Gaps = 28/162 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQ 73
+G L+ V+A+D D G GLV + L ++ D A F LD ++ HQ
Sbjct: 2394 VGAELLHVEASDADPGPHGLVRFTL--SSGDPAGLFELDESSGALRLARPLDCETQARHQ 2451
Query: 74 GPIQDE---GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
+Q G + A V I V D+ND P F S+ E Q G V +HA D D
Sbjct: 2452 LVVQAADPVGAHFALAPVTIEVQDVNDHGPAFPLSLLSTSLAENQPPGTLVTTLHAIDGD 2511
Query: 130 EGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYE 164
G ++Y++ E P F ++++TG++R A DYE
Sbjct: 2512 AGAFGRLHYTLLEAGPGPEGREAFALNSSTGELRARVAFDYE 2553
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 20/158 (12%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL---------------DPATEHQGPI 76
TL ++A+D D G G ++YR+LD + A +L +PA + +
Sbjct: 1545 TLTTLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQLRIEA 1604
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQN 133
+D G LS+T V + V D ND P F Y VPE G + ++ A D D G N
Sbjct: 1605 RDGGQPALSATLLVTVTVLDANDHAPAFPVPAYSVEVPEDAPAGTLLLQLQAHDPDAGAN 1664
Query: 134 AVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
V Y + F+++ ++G++RT ALD E+ Y
Sbjct: 1665 GHVTYYLGAGAAGAFLLEPSSGELRTATALDREQCSSY 1702
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 64/146 (43%), Gaps = 26/146 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY--------------RLLDNNTDAASY 63
FY A + + G +QV ATD DSG FGL+ Y R+ ++ D +
Sbjct: 579 FYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGASGSPPFRIDAHSGDVCTT 638
Query: 64 FNLDPATEHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEG 114
LD QGP D GGL S V + V+D ND P+F Y S+ +
Sbjct: 639 QTLD---RDQGPSSFDFTVTAVDGGGLKSIVYVKVFVSDENDNPPQFYPREYAASLSAQS 695
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV 140
G AV RV A D D+G + + Y +
Sbjct: 696 PPGTAVLRVRAHDPDQGPHGRLSYHI 721
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 74/167 (44%), Gaps = 32/167 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQ----- 73
G ++QVKA D G V Y L + +S F L+P + E Q
Sbjct: 1013 GTQILQVKARAPDGGS---VTYHLAGDG--PSSPFGLEPQSGWLWVRAALDRESQELYTL 1067
Query: 74 ------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
G + G + TATV + + + ND +P P +V E Q G +VGRV+A+
Sbjct: 1068 KVMAVSGSKAESGQQTGTATVRVSILNQNDHSPRLSEEPTFLAVAENQPPGSSVGRVYAS 1127
Query: 127 DADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
D D G N + YS+ + F + TG++ T + LD E+Q Y
Sbjct: 1128 DRDSGPNGRLTYSLRQMSEDSKAFRIHPQTGEVTTLQTLDRERQSSY 1174
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 68/158 (43%), Gaps = 23/158 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G + V A D D G+ V YRL YF L P+T EH+
Sbjct: 1338 GPVALHVVARDPDLGEAARVTYRLAAGGD---GYFRLHPSTGALSLVRPLDREHRAEHLL 1394
Query: 76 ---IQDEGGLSSTAT--VNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
D G +AT + + V D+ND+ P FQ Y + E G ++ + ATD D
Sbjct: 1395 TVVASDHGSPPRSATQLLTVSVADVNDEAPAFQQQEYSVLLRENSPPGTSLLTLRATDPD 1454
Query: 130 EGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQ 167
G N V Y F +D +TG + T +ALD E+Q+
Sbjct: 1455 LGANGQVTYGGISGESFSLDPDTGVLTTLRALDREEQE 1492
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 68/161 (42%), Gaps = 36/161 (22%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDE---------- 79
G L+Q++A D D+G G V Y L AA F L+P++ G ++
Sbjct: 1648 GTLLLQLQAHDPDAGANGHVTYYL---GAGAAGAFLLEPSS---GELRTATALDREQCSS 1701
Query: 80 -------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-----GQDGLAVG 121
G LS+T V I V D+ND P F S P +P LA+
Sbjct: 1702 YSFSVSAVDGAAAGPLSTTVPVTITVRDVNDHAPTFPSSPLRLRLPRPGPSLSTPTLALA 1761
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKA 160
+ A D D G NA + Y + P VD+ TG+IR ++
Sbjct: 1762 TLRAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVTRS 1802
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A +++ + DIND P F Y V E G V +V+A+DAD N V Y +
Sbjct: 236 ALLDVTLLDINDHAPAFNQSRYHAVVSESLAPGSPVLQVYASDADADANGAVTYEINRRQ 295
Query: 143 ---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D PF +DA+TG +R + LD+E+++++
Sbjct: 296 SEGDGPFSIDAHTGLLRLERPLDFEQRRVH 325
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 77/179 (43%), Gaps = 32/179 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG---- 74
Y A + G +++V+A D D G G + Y +L N+ F LD EH G
Sbjct: 687 YAASLSAQSPPGTAVLRVRAHDPDQGPHGRLSYHILAGNS--PPLFALD---EHSGLLTV 741
Query: 75 --PI--------------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ QD GGL + +A VNI + P F+ L Y FSVPE
Sbjct: 742 AWPLARQVNSVVQLEIGAQDGGGLKAELSARVNISIVPGTPIPPIFEQLQYVFSVPEDVA 801
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
G +VG V A + G+ V ++ P F +D +G ++T + LD E LE
Sbjct: 802 PGTSVGIVQAHNP-PGRLGPVTLALSGGDPRGLFSLDGASGLLQTLRPLDRELLGPVLE 859
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 78/172 (45%), Gaps = 35/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G ++ +V A+D+DSG G + Y L + D+ + F + P T E Q
Sbjct: 1118 GSSVGRVYASDRDSGPNGRLTYSLRQMSEDSKA-FRIHPQTGEVTTLQTLDRERQSSYQL 1176
Query: 76 ---IQDEGG--LSSTATVNIRVTDINDKNPEF--------QSLPYEF--SVPEGQDGLAV 120
+QD G S+T TV+I V D+ND +P F LP + VP G V
Sbjct: 1177 LVRVQDGGSPPRSATGTVHIAVLDLNDNSPTFLQASGAAGGGLPIQVPDRVPPGT---LV 1233
Query: 121 GRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ A D DEG+N + Y++ P F + ++G++ T L ++ Y+
Sbjct: 1234 TTLQAKDPDEGENGTILYTLTGPGSELFSLHPHSGELLTAAPLIRAERPHYV 1285
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 71/173 (41%), Gaps = 31/173 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQ---GPI---------- 76
G + ++A D DSG V + LLD F +DP T H GP+
Sbjct: 907 GTLIYTLRALDPDSGVNSRVTFNLLDGG---GGVFTVDPTTGHVRLIGPLGAPGGPAYEL 963
Query: 77 ----QDEGGLSSTATVNIRVT--DINDKN--PEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
+D G T+ +RV D+ + P F S Y +P G G + +V A
Sbjct: 964 DLEARDGGSPPRTSHFRLRVVIQDLVTRGLAPHFDSPTYRVDLPSGTTPGTQILQVKARA 1023
Query: 128 ADEGQNAVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D G V Y + D PF ++ +G + ALD E Q+LY +V +S
Sbjct: 1024 PDGGS---VTYHLAGDGPSSPFGLEPQSGWLWVRAALDRESQELYTLKVMAVS 1073
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 71/181 (39%), Gaps = 46/181 (25%)
Query: 30 GVTLMQVKATDKDSGK-FGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------ 82
G TL+ ++ATD D + V+Y ++ N F L+P G + GGL
Sbjct: 2275 GSTLLTLEATDADGSRTHATVDYSIVSGNR--GRVFQLEPRLAEAG---ESGGLGPQALG 2329
Query: 83 ------------------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
SS V + V D+ND P F Y +V
Sbjct: 2330 CLVLLEPLDFESLTQYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASYRVAVS 2389
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E G + V A+DAD G + +V +++ P F +D ++G +R + LD E Q
Sbjct: 2390 EDTPVGAELLHVEASDADPGPHGLVRFTLSSGDPAGLFELDESSGALRLARPLDCETQAR 2449
Query: 169 Y 169
+
Sbjct: 2450 H 2450
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 72/178 (40%), Gaps = 35/178 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-- 76
Y A + L L+QV+A D D G G + Y L + A F++DPA+ G I
Sbjct: 1953 YVAFLPESRPLEGPLLQVEADDLDQGPSGQISYSLAASQP-ARGLFHVDPAS---GTITT 2008
Query: 77 ------------------QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
D G L +AT+ + V D ND P P+E V E
Sbjct: 2009 TAILDREIWAETRLVLMATDRGSPALVGSATLTVMVIDTNDNRPTIPQ-PWELQVSEDAL 2067
Query: 116 DGLAVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + +V D D G V++Y S P+D PF V G + LD+E+ Y
Sbjct: 2068 LGSEIAQVTGNDVDSG--PVLWYVLSSSGPQD-PFSVGRYGGRVSLTGPLDFEQCDRY 2122
Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 28/135 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------------ATEHQG--- 74
G ++ V ATD+DSG G + Y L A F++DP A H+G
Sbjct: 2169 GSAILSVSATDRDSGANGHISYHL----ASPAEGFSVDPNNGTLFTTAGTVALGHEGLGV 2224
Query: 75 -----PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHAT 126
+D G G ++ ATV++++ D ND P F Y +V E G + + AT
Sbjct: 2225 VDVVLEARDHGMPGRAARATVHVQLQDQNDHAPSFTLPHYRVAVTEDLPPGSTLLTLEAT 2284
Query: 127 DADEGQ-NAVVYYSV 140
DAD + +A V YS+
Sbjct: 2285 DADGSRTHATVDYSI 2299
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 15/93 (16%)
Query: 82 LSSTATVNIRVTDINDKNPEF-------QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
L + A + VTD+ND P F + LP E ++P G V RV A D D+G N
Sbjct: 449 LRAEAAFVLHVTDVNDNVPAFDRQLYRPEPLP-EVALP----GSFVVRVTARDPDQGTNG 503
Query: 135 VVYYSVP---EDIPFVVDANTGDIRTNKALDYE 164
V YS+ F +D +G I T +LDYE
Sbjct: 504 QVTYSLAPGSHTRWFSIDPTSGIITTAASLDYE 536
>gi|410896278|ref|XP_003961626.1| PREDICTED: protocadherin-15-like [Takifugu rubripes]
Length = 1746
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 87/178 (48%), Gaps = 30/178 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDS-------------GKFGLVE---YRLLDNNTDAAS 62
Y + G TL+ ++A D++ G F L + + LL + D S
Sbjct: 597 YNLEVSEAMRTGATLLHLQAVDREKDPVSYVIQSGDLHGHFALQQNSGHLLLSSPLDRES 656
Query: 63 --YFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQ-SLPYEFSVPEGQDGLA 119
++ L+ T G EG +STATVNI VTD+ND +P+F SLP +VPE Q
Sbjct: 657 LDHYTLE-VTASDG--HQEG--TSTATVNIVVTDVNDNDPQFDPSLPVNLTVPEEQGHAY 711
Query: 120 VGRVHATDADEGQNAVVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
VGRV ATD D G + V+Y V F ++A TG IRT LD E + Y FLI
Sbjct: 712 VGRVKATDPDLGASGQVHYRLVNHQTMFSINA-TGAIRTEAPLDREVKGHY----FLI 764
Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 36/166 (21%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAA--SYFNLDPATEHQGPIQ------------- 77
++Q+ A D D + YR+ D F+LDPAT ++
Sbjct: 814 ILQLTALDAD--LHSNLTYRIRSEGVDPEILRLFHLDPATGELSALKVLDYEGFSESDPS 871
Query: 78 --------DEGGL--SSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHAT 126
D GG A+V +R+TD+ND +P F +SL P G V V A
Sbjct: 872 YTFTVEAVDAGGTMPPGLASVTVRITDMNDFSPVFGRSLYRGMVAPNAVKGTIVITVMAN 931
Query: 127 DADEGQN--AVVYYSV-PEDIP-----FVVDANTGDIRTNKALDYE 164
D+D +V Y V PE P F VD TG++ T L+ E
Sbjct: 932 DSDPTGTPAGLVRYKVDPEAYPYSGSIFDVDDKTGNVVTRVNLNEE 977
>gi|47227082|emb|CAG00444.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2270
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 79/161 (49%), Gaps = 22/161 (13%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPI- 76
+G ++ V A D+D G+ G V YR+ NT A F+L+P T E Q
Sbjct: 1023 VGFVILYVMARDEDEGENGRVSYRIQAGNT--AGRFSLNPNTGSLSILKALDREEQEVFN 1080
Query: 77 -----QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D G LS++ +++RV D+ND+ P FQ +E V E + G V +V A D
Sbjct: 1081 LTIVAEDHGIPQLSTSQVLSVRVIDVNDEAPVFQRAEFEALVIENKGPGTTVLKVTAVDR 1140
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D+G N V Y + FV++ TG I T K LD E Q Y
Sbjct: 1141 DQGSNGHVTYGGVTEEGFVINPVTGVITTTKELDTEAQDHY 1181
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 25/157 (15%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--- 77
A R+ + + A D D+G FG ++Y +L+ F++DP + G I+
Sbjct: 1667 ASIRENQPANSAVTVLHAIDHDTGVFGHLKYFMLERTGTGKESFSVDP---NSGEIRSKI 1723
Query: 78 -----------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
D G S+T TV + VT ++ +P F S + F VPEG + G +
Sbjct: 1724 PFDFEKINSFNFVAMAIDSGNHSATVTVQVFVTGEDEYDPVFLSQDFSFEVPEGAKKGQS 1783
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDI 155
+G+V A D D G + +V YS P P F V+ TG I
Sbjct: 1784 IGQVQANDEDGGVDGIVLYSFPTGSPYFDVNKTTGVI 1820
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 75/160 (46%), Gaps = 30/160 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EH 72
G ++++V A D DSG G V YR + +++F L+ T
Sbjct: 123 GTSVVKVTANDPDSGLNGRVTYRTVPGG--GSAFFTLNKDTGVISLSRSLHGKANTVISM 180
Query: 73 QGPIQDEGGLSSTATVNIR----VTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATD 127
+ +D GGL TA VN R V + +P F+ Y F+VPE G ++G V A+
Sbjct: 181 EIAAEDGGGL--TAPVNARVNVSVVGGSVTSPVFEQAQYFFTVPEDVLRGTSLGVVRAS- 237
Query: 128 ADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
A G + + YS+ P F VD++TG IRT LD+E
Sbjct: 238 AKTGGSKDILYSISSGDPYGYFTVDSSTGTIRTALPLDHE 277
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPED 143
+ T + VTD ND P F S P SV E Q G + V A D DEG+N V Y +
Sbjct: 992 SVTARMFVTDENDNTPVFSS-PSAVSVMEDQPVGFVILYVMARDEDEGENGRVSYRIQAG 1050
Query: 144 IP---FVVDANTGDIRTNKALDYEKQQLY 169
F ++ NTG + KALD E+Q+++
Sbjct: 1051 NTAGRFSLNPNTGSLSILKALDREEQEVF 1079
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 67/152 (44%), Gaps = 23/152 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLD----------PATEHQGP------ 75
L QV ATD+D G FG V Y L + F +D P +G
Sbjct: 19 LAQVSATDEDRGSFGAVTYALGSPSGNTPPDQFTIDKGSGQLCTSTPLDRDEGADKFDLT 78
Query: 76 --IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQ 132
D GGLSS A V + V DIND P F + Y S+ G +V +V A D D G
Sbjct: 79 VTATDGGGLSSVARVRVSVVDINDNRPAFYPVLYTVSLSTHSSPGTSVVKVTANDPDSGL 138
Query: 133 NA-VVYYSVP--EDIPFVVDANTGDIRTNKAL 161
N V Y +VP F ++ +TG I +++L
Sbjct: 139 NGRVTYRTVPGGGSAFFTLNKDTGVISLSRSL 170
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 55/130 (42%), Gaps = 8/130 (6%)
Query: 44 GKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--DEGGLSSTATVNIRVTDINDKNPE 101
G FG+ Y + + + H IQ D G + A V + V D+ND +P
Sbjct: 1600 GMFGIHRYNQWSGALRLQRALDREHQSTHTVIIQATDGQGHFALAPVVVEVKDVNDNHPF 1659
Query: 102 FQSLPYEFSVPEGQDG-LAVGRVHATDADEGQNAVVYYSVPEDI-----PFVVDANTGDI 155
F S+ E Q AV +HA D D G + Y + E F VD N+G+I
Sbjct: 1660 FPVEVLTASIRENQPANSAVTVLHAIDHDTGVFGHLKYFMLERTGTGKESFSVDPNSGEI 1719
Query: 156 RTNKALDYEK 165
R+ D+EK
Sbjct: 1720 RSKIPFDFEK 1729
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 15/114 (13%)
Query: 71 EHQGPIQ-----DEGGL---SSTATVNIRVTDINDKNPEFQSLPYE----FSVPEG-QDG 117
EHQ Q +GG S+T T +I V D ND P F + V EG G
Sbjct: 643 EHQSSYQLVVVVQDGGTPPRSATGTAHITVLDENDNAPTFSHTRPDRELLLQVVEGLPSG 702
Query: 118 LAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+G V A D DEG+N V+YS+ F ++ TG+++ L + ++ Y
Sbjct: 703 TVLGTVTAKDPDEGENGTVHYSLSGARAERFTLNPMTGELKAASPLRWAERSEY 756
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 67/164 (40%), Gaps = 26/164 (15%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY----------- 63
D+L Y R+ L +QV+A + ++ + Y L + DAA +
Sbjct: 427 DTLTYRVELRENTPLNTQFLQVRALNTEASGGSSISYHLRPDG-DAAGFGIMSDSGWIFV 485
Query: 64 -FNLDPATE---------HQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
+LD + GP G + +ATV + VTD ND +P +V E
Sbjct: 486 RSSLDREVKDMYLLTVLASSGP--GGAGRTGSATVRVTVTDENDNSPRLSQERVFLAVRE 543
Query: 114 G-QDGLAVGRVHATDADEGQNAVVYYSVPE-DIPFVVDANTGDI 155
G GRV A D D G NA + Y + D F +++ TG I
Sbjct: 544 NLLAGTGFGRVSAIDRDAGLNARLTYKLLHTDRHFQINSQTGKI 587
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 75/186 (40%), Gaps = 36/186 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQ--------- 77
G L V A D D G+ G V Y L + A F L+P T + P++
Sbjct: 702 GTVLGTVTAKDPDEGENGTVHYSL---SGARAERFTLNPMTGELKAASPLRWAERSEYTF 758
Query: 78 -----DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHA---- 125
D G GLSST + I+V N + + EG G +G V +
Sbjct: 759 MVTAADHGSPGLSSTCRLQIQVLSSARSNLKPNIFSVTMNAVEGAPPGSIIGSVRSQNHQ 818
Query: 126 -TDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQ---LYLERVFLISK 178
+ + EGQ V Y V D F+VD GD+ + LDYEK L++E
Sbjct: 819 QSSSTEGQ--VTYLVVGGSDRDGTFMVDRLKGDVYLVRELDYEKGSRYTLHIEVSDFSQA 876
Query: 179 FATSYL 184
F +S+L
Sbjct: 877 FPSSHL 882
>gi|224067665|ref|XP_002195148.1| PREDICTED: protocadherin Fat 2 [Taeniopygia guttata]
Length = 4428
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 66/128 (51%), Gaps = 20/128 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++Q+ A+DKDSG+ +V Y+++D+ +DAA +FN+D +T H Q
Sbjct: 2294 VVQLFASDKDSGRNKVVSYQIMDDGSDAAKFFNIDASTGHITTAQALDYETNQQFRMKVR 2353
Query: 78 --DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQ 132
D G LSS A V + VTDIND PEF L YE V E G V +V A D D G
Sbjct: 2354 AADHGVPPLSSDALVIVDVTDINDNPPEFSQLQYEAKVSEMATCGHIVIKVQALDPDSGD 2413
Query: 133 NAVVYYSV 140
+ Y +
Sbjct: 2414 TTRLEYVI 2421
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE 142
S ATV + V D+ND P+F+++PY +V +G + G + +V ATD D G N V YS E
Sbjct: 2055 SQATVRVYVEDVNDNPPQFENVPYYATVQDGTEPGDVLFQVSATDKDIGDNGAVTYSFAE 2114
Query: 143 DIP-FVVDANTGDIRTNKALDYEKQQLYLERVF 174
+ F +D GDI + LDY+ Y RV
Sbjct: 2115 EYKYFRIDPYLGDISLKRPLDYQALNKYNLRVI 2147
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 22/165 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASYFNLDP 68
Y A + E+G ++++ A D D G +G ++Y + +DN A+ LD
Sbjct: 2489 YEAELAENAEIGTKVIELLAIDPDGGPYGTIDYTIINKLAHEKFSIDNKGCIATLQKLDR 2548
Query: 69 ATEHQGPI------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVG 121
+ I +D GG + TV I +TD ND P F++ Y S+ G V
Sbjct: 2549 ENSTERVIAIKVMAKDGGGKVAFCTVKIILTDENDNPPLFKASEYTLSIQSNVSKGSPVI 2608
Query: 122 RVHATDADEGQNAVVYYSVP--EDIP---FVVDANTGDIRTNKAL 161
+V A DADEG NA V YSV ED+ ++A TG ++ ++L
Sbjct: 2609 QVLAYDADEGANADVIYSVDSVEDVTEDLVEINAATGVVKVKESL 2653
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYS 139
G S A V + V DIND P F + Y SV E V ++ A+D D G+N VV Y
Sbjct: 2254 GSFSEARVEVEVEDINDNPPIFSQIIYTASVSESLPPQTPVVQLFASDKDSGRNKVVSYQ 2313
Query: 140 VPEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ +D F +DA+TG I T +ALDYE Q + +V
Sbjct: 2314 IMDDGSDAAKFFNIDASTGHITTAQALDYETNQQFRMKV 2352
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVY 137
E L S +VNI+V D+ND P F++ PY V E G V +V A D D G V
Sbjct: 2778 ETELVSLVSVNIQVQDVNDNRPVFEADPYRAFVMENMPSGTTVIQVTANDQDTGSAGQVT 2837
Query: 138 YSVPEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
YS+ + F +D +G I T K LD E Q++Y R ++++
Sbjct: 2838 YSLEAESGNLRGLFTIDGESGWITTLKELDCEDQEIY--RFYVVA 2880
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 76 IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNA 134
+ +G +T V I V DIND +PE + Y V E GL + ++ ATD D G NA
Sbjct: 2988 VASDGKFQATTEVEIFVLDINDNSPECGQILYTGRVSEDAGPGLLILKISATDPDVGSNA 3047
Query: 135 VVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ YS+ P F + +TG++ T+ +LD E++ Y
Sbjct: 3048 QITYSLHGPGAEEFRLGPHTGELSTSASLDREQKPTY 3084
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVP--EDI 144
V + + D N+ P F Y + E G +V V ATD D+G N V YS+ + +
Sbjct: 447 VIVDIIDCNNHAPSFTQSSYHGAFDENVPPGTSVLTVKATDEDKGDNGFVTYSIANQKSV 506
Query: 145 PFVVDANTGDIRTNKALDYE-KQQLYLERVF 174
PFV+D +G I T+K++DYE Q+ Y RV+
Sbjct: 507 PFVIDPYSGVIFTSKSMDYELMQRWYHLRVW 537
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD--------PATEHQGP-------I 76
T+ + ATD D+G G + Y + D N D+ +L+ P Q +
Sbjct: 735 TIADLSATDPDTGFSGKLVYVISDGNDDSCFTIDLERGLLQVLSPLDHEQTSFYILNITV 794
Query: 77 QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQN 133
D G SS + + V D ND P+F Y ++PE G + ++ A DAD N
Sbjct: 795 YDLGTPQKSSWKLLAVNVLDTNDNTPKFTQASYWVAIPEHVAAGTTIAQLKAEDADTDDN 854
Query: 134 AVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V YS+ P D F +++ TG++ ALD E Y+ ++
Sbjct: 855 GRVKYSLLTPTD-KFAINSVTGEVTVTGALDRELWPCYVLKI 895
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 70/168 (41%), Gaps = 21/168 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN---------TDAASYFN--LD 67
Y AM ++ +G ++ + +D+ + ++Y +++ N A Y N LD
Sbjct: 3226 YVAMVKEDVAVGTEVLNLSVLTRDNAENNEIKYEIVNGNDHGKFQLNPNTGALYINGSLD 3285
Query: 68 PATEHQGPIQDEG------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAV 120
H+ + EG LS V I +TDIND PEF PY + E G +
Sbjct: 3286 FEVSHEYYLSIEGTRKGSASLSDVTMVVINITDINDHAPEFIQDPYFTDIREDAAIGEII 3345
Query: 121 GRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEK 165
V A D D N + YS+ E P F + G I K LD E+
Sbjct: 3346 LTVSADDLDGSMNNQITYSIVEGNPLGHFAIQPKNGQISIAKHLDREE 3393
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 77/186 (41%), Gaps = 35/186 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + G T++QV A D+D+G G V Y L + + F +D
Sbjct: 2806 YRAFVMENMPSGTTVIQVTANDQDTGSAGQVTYSLEAESGNLRGLFTIDGESGWITTLKE 2865
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
AT+H +Q LSS V + V+D ND P+F S Y+ SV E
Sbjct: 2866 LDCEDQEIYRFYVVATDHGRKVQ----LSSQTLVEVTVSDENDNAPQFTSDFYKGSVIEN 2921
Query: 114 GQDGLAVGRVHATDAD--EGQNAVVYYSVPEDI--PFVVDANTGD--IRTNKALDYEKQQ 167
+ G + + DAD E V Y DI F V+ G+ I + K LD E +
Sbjct: 2922 AEPGQVIVTLSTIDADISEQNRRVTCYITEGDILGQFTVEQIEGEWTISSKKPLDREDTE 2981
Query: 168 LYLERV 173
YL +V
Sbjct: 2982 KYLLKV 2987
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 24/171 (14%)
Query: 14 SDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA---- 69
S +FY ++ + +++Q+ A D DS G + + +L N NL
Sbjct: 1140 SRPVFYASVMENSPP-NTSVLQLDAFDPDSSSEGKLTFHILTGNLQGLFTINLSTGLIST 1198
Query: 70 ----------TEH--QGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-- 113
EH + + D G L S++ V I+V D ND P F + +PE
Sbjct: 1199 TSRQLDREYKAEHILEVAVSDNGEPALKSSSRVVIQVLDANDSPPSFPHKLFMVQLPERE 1258
Query: 114 -GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKAL 161
+ L V R+ A+D D+GQN+ + Y++ E+ F ++ TG + + KA
Sbjct: 1259 ASETPLPVYRLIASDRDQGQNSQITYTIEEEEEGIFTINPTTGTVFSRKAF 1309
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 73/164 (44%), Gaps = 28/164 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G T+ Q+KA D D+ G V+Y LL TD + ++ G +
Sbjct: 838 GTTIAQLKAEDADTDDNGRVKYSLL-TPTDKFAINSVTGEVTVTGALDRELWPCYVLKIE 896
Query: 77 ---QDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQDGLAVGRV----HATD 127
Q + G + ++ VT D+ND P Q LP SV +D L VG + A D
Sbjct: 897 ARDQPKTGFQLFSVTDLIVTLEDVNDNTP--QCLPALNSVKVPED-LPVGTILLFLEAFD 953
Query: 128 ADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D G V YS+ E++ F VD TG +R K LDYEK+ Y
Sbjct: 954 PDAGSGGEVRYSLINNEEMMFHVDKLTGALRLEKELDYEKRDSY 997
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 67/167 (40%), Gaps = 28/167 (16%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------ 70
L+ G ++ D G+ ++++ ATD D G + Y L + A F L P T
Sbjct: 3018 LYTGRVSEDAGP-GLLILKISATDPDVGSNAQITYSL---HGPGAEEFRLGPHTGELSTS 3073
Query: 71 ----EHQGPI-------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP---EGQD 116
Q P D GG S A V + + D ND P F P +V
Sbjct: 3074 ASLDREQKPTYHLVAKATDGGGRSCQADVTLIIEDTNDNAPRF--FPSHCAVAVFDNTTT 3131
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKAL 161
+ V A D DEG NA V YS+ + F ++ TG IR K L
Sbjct: 3132 KTPIAVVAARDLDEGLNAEVVYSLSDSANGHFSIEETTGVIRLEKPL 3178
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 74/175 (42%), Gaps = 34/175 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSS----- 84
G +++V ATDKD GK GL+ + + F LDP G + G SS
Sbjct: 1468 GREILRVSATDKDKGK-GLIYTIHGSVDPKSTRLFQLDPG---NGVLTTAEGFSSQPMPQ 1523
Query: 85 -TATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
T TV +R V N P+F S+ YE V + G V +V A
Sbjct: 1524 HTLTVMVRDQEVPIKRNFVRVIVHVDSCNLHPPQFSSIHYEAEVLDSAVVGTEVIQVRAL 1583
Query: 127 DADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
D D+G NA + YS+ + F +D +G + + LD +Q ER LI K
Sbjct: 1584 DQDQGANAEIRYSLQAGNGEGFFSIDPYSGIVTVAQKLDPSRQ----ERFTLIVK 1634
Score = 42.7 bits (99), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 64/165 (38%), Gaps = 24/165 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA---TEHQGP 75
Y A +D E G L QV ATDKD G G V Y + YF +DP + P
Sbjct: 2078 YYATVQDGTEPGDVLFQVSATDKDIGDNGAVTYSF----AEEYKYFRIDPYLGDISLKRP 2133
Query: 76 I--------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVG 121
+ +D+G A + ++ N NP FQSL Y VPE
Sbjct: 2134 LDYQALNKYNLRVIAKDKGEPPLHAEEEVVISVRNRSNPLFQSLYYRVKVPENVPPYTSI 2193
Query: 122 RVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYE 164
+ EG ++Y V ED F D TG + LDYE
Sbjct: 2194 LHIQARSPEGLR-LIYNIVEEDSLKLFNTDFKTGVLTVTGQLDYE 2237
Score = 42.4 bits (98), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 74/177 (41%), Gaps = 35/177 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------ 82
+G L+ ++A D D+G G V Y L++N F++D T G ++ E L
Sbjct: 942 VGTILLFLEAFDPDAGSGGEVRYSLINNE---EMMFHVDKLT---GALRLEKELDYEKRD 995
Query: 83 -----------------SSTATVNIRVTDIND--KNPEFQSLPYEFSVPEGQ-DGLAVGR 122
SS + + V D+N+ P F S ++ V E G +V
Sbjct: 996 SYNLTVQVSDGGKPFSRSSLCHLEVNVIDVNENLNPPRFASFIFKGWVQENSPKGTSVMM 1055
Query: 123 VHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
V A D D G++ V Y + E F ++ +TG IRT +LD E Y V +
Sbjct: 1056 VTAKDIDRGKDGEVQYFLREGTGLSVFHIEKDTGTIRTIGSLDREGTSHYWLTVLAL 1112
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 36/184 (19%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------A 69
S+ Y A D +G ++QV+A D+D G + Y L N + +F++DP
Sbjct: 1560 SIHYEAEVLDSAVVGTEVIQVRALDQDQGANAEIRYSLQAGNGEG--FFSIDPYSGIVTV 1617
Query: 70 TEHQGP-----------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ P +D+G L +ATV++ + + P+F Y + E +
Sbjct: 1618 AQKLDPSRQERFTLIVKAEDQGFPQLKDSATVHVHIRPSDRTPPKFLEAEY---ITEISE 1674
Query: 117 GLAVG----RVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
A+G +V AT + V Y + + D F ++ +G I T K LD+E+ Y
Sbjct: 1675 STAIGSPLIQVSATSL-----SPVSYEIKDGNGDGVFSMNYQSGLISTQKNLDFEQVSFY 1729
Query: 170 LERV 173
+V
Sbjct: 1730 QLKV 1733
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
I V DIN P+F YE VPE G + RV ATD D+G+ +
Sbjct: 1440 IHVIDINQHRPQFLQSHYEVRVPEDTPSGREILRVSATDKDKGKGLI 1486
Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP-ED 143
A V I + D ND P F Y+ S+ E + + ATDAD GQNA YY++ +
Sbjct: 135 AKVLIHILDRNDLKPLFSPPSYKVSIREDTPLKTVISTLSATDADAGQNAEFYYALSTKS 194
Query: 144 IPFVVDANTGDIRTNKALD 162
F V TG + L+
Sbjct: 195 NLFTVHPTTGAVMVTGRLN 213
>gi|126290846|ref|XP_001377194.1| PREDICTED: protocadherin alpha-2-like [Monodelphis domestica]
Length = 875
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 87/196 (44%), Gaps = 42/196 (21%)
Query: 7 PSALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL 66
P S +LF+ + L T A+D D+G L+ YRL N YF+L
Sbjct: 150 PPVFPTKSKNLFFS----ESRPLDSTFPLEGASDADTGTNALLSYRLSPNE-----YFSL 200
Query: 67 DPATEHQ----------GPIQDE-------------GG---LSSTATVNIRVTDINDKNP 100
D T + P+ E GG L+ T + I+V D+ND P
Sbjct: 201 DVQTNEELSQSLSLVLRKPLDREETSRVNLLLIATDGGKPELTGTVHLLIKVLDVNDNEP 260
Query: 101 EFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTG 153
F Y+ + E +G V +++A+D+DEG N+ V YS D+P F +DA TG
Sbjct: 261 VFDQSLYKVRLLENTANGTLVIKLNASDSDEGSNSEVIYSFSSDVPSTVQNKFKIDARTG 320
Query: 154 DIRTNKALDYEKQQLY 169
+IR LDYE+ + Y
Sbjct: 321 EIRIKGQLDYEEAKSY 336
Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 37/179 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------------NTDAASYFN 65
Y ++ + G + V A+D D+ + LV Y L+D ++++ +
Sbjct: 480 YTVFVKENNPPGCHIFTVLASDTDALENSLVSYSLVDRQVGERLLSSYVSVHSESGKVYA 539
Query: 66 LDPA-------TEHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
L P + Q +D G L+S ++ + V D ND P LP + +
Sbjct: 540 LQPLDHEELELLQFQVSARDAGFPPLASNVSLQVFVLDENDNAPAV--LPPHAGISSVSE 597
Query: 117 --------GLAVGRVHATDADEGQNAVVYYSVPEDI-----PFVVDANTGDIRTNKALD 162
G V ++ A DAD G NA + Y + ++ PF V TG+I T +AL+
Sbjct: 598 LVSQSVAAGHVVAKIRAVDADSGYNAWLSYELQPEVGVSRSPFRVGLYTGEISTIRALE 656
>gi|432930279|ref|XP_004081409.1| PREDICTED: cadherin-12-like [Oryzias latipes]
Length = 803
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 85/188 (45%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + +G + QV ATD D +G V Y +L YF++DP T
Sbjct: 170 YVASVPEMSPVGTYVTQVTATDADDPTYGNSARVVYSILHGQ----PYFSVDPKTGVIKT 225
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
E+Q IQ + GGL+ T VNI ++D+ND P F + VPE
Sbjct: 226 ALPNMDREVKEEYQVLIQAKDMGGQLGGLAGTTIVNITLSDVNDNPPRFSKSFFHLRVPE 285
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYS-VPEDIPFVVDANT------GDIRTNKALDYEK 165
G A+GR+ A D D G+NA V Y+ VP D V D T G + + LDYE
Sbjct: 286 SSAVGSAIGRIKAHDLDIGRNAEVEYTIVPGDGGTVFDITTNEHNQEGIVILKRPLDYES 345
Query: 166 QQLYLERV 173
++ Y +V
Sbjct: 346 KKAYTFKV 353
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY SVPE G V +V ATDAD+ G +A V YS+ P
Sbjct: 153 IKVQDINDNEPKFLEGPYVASVPEMSPVGTYVTQVTATDADDPTYGNSARVVYSILHGQP 212
Query: 146 -FVVDANTGDIRT 157
F VD TG I+T
Sbjct: 213 YFSVDPKTGVIKT 225
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 67/179 (37%), Gaps = 33/179 (18%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY-------------------------- 51
F+ + +G + ++KA D D G+ VEY
Sbjct: 278 FFHLRVPESSAVGSAIGRIKAHDLDIGRNAEVEYTIVPGDGGTVFDITTNEHNQEGIVIL 337
Query: 52 -RLLDNNTDAASYFNLDPATEHQGP-IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF 109
R LD + A F ++ + H P Q G TATV I V D+ D+ P F Y
Sbjct: 338 KRPLDYESKKAYTFKVEASNAHMDPRFQSFGAFKDTATVKINVLDV-DEPPVFNKPSYVM 396
Query: 110 SVPEGQD-GLAVGRVHATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYE 164
V E G +G V A D D + V Y + D F +D G I TN LD E
Sbjct: 397 DVYEDTPAGTIIGAVTAQDLDASSSPVRYSIDWRSDLDSYFDIDPVEGTISTNDLLDRE 455
>gi|402870407|ref|XP_003899216.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Papio anubis]
Length = 4928
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 83/170 (48%), Gaps = 22/170 (12%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL++Y + N + A + +
Sbjct: 3096 ATIPESHSIGSIVRTVSARDRDAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYE 3155
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
+H+ I D G ++ T +V + V D+ND +P F S Y +V E G V
Sbjct: 3156 LCQKHEMTISAIDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIH 3215
Query: 123 VHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y+V D+ FV+D NTG I T LD+E +Q Y
Sbjct: 3216 LNATDADSGTNAVIAYTVQSSDSDL-FVIDPNTGVITTQGFLDFETKQSY 3264
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F +DP + E +
Sbjct: 1756 GSKIMQLTAMDADEGANALVTYTIISGADDS---FRIDPESGDLIATRRLDRERRSKYSL 1812
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQ 132
D+G SS +NI V+D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1813 LVRADDGLQSSDVRINITVSDVNDHTPKFSRPVYSFDIPEDTIPGSLVAAILATDDDSGV 1872
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG + LDYE QQ Y+ V
Sbjct: 1873 NGEITYIVNEDDEDGIFFLNPVTGVFNLTRVLDYEVQQYYILTV 1916
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 24/162 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V A DKDSG G ++Y +++ N + + F+++ AT ++
Sbjct: 2687 ILTVSAVDKDSGPNGQLDYEIVNGNMENS--FSINHATGEIRSVRPLDREKVSYYVLTIK 2744
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G S +A+V I + D ND P F + + VPE G V RV +D D G
Sbjct: 2745 SSDKGSPSQSASVKVMINILDENDNAPRFSQI-FSAHVPENSPLGYTVTRVTTSDEDIGI 2803
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA+ YS+ + +PF ++ +TGDI ++ L+ E Y RV
Sbjct: 2804 NAISRYSIMDTSLPFTINPSTGDIVISRPLNREDTDRYRIRV 2845
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 75/173 (43%), Gaps = 21/173 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-----------AASYFNL 66
FY A + +++V A+D D G GL+ Y ++ N + A L
Sbjct: 1214 FYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEERQFAIDITSGQVALIGKL 1273
Query: 67 D----PATEHQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
D PA D G L+ST T+NI + D ND P F V E + G
Sbjct: 1274 DYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGEL 1333
Query: 120 VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD+D G NA +YYS+ F + NTG I K LD+E Q LY
Sbjct: 1334 VSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGSIFLAKKLDFETQSLY 1386
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 74/162 (45%), Gaps = 23/162 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI----QDEGGL--- 82
G L+ ++ATD D G G V + L + TD S F LDP + I ++E
Sbjct: 599 GTELLMLRATDGDLGDNGTVRFSLQEAETDRRS-FRLDPVSGRLSTISSLDREEQAFYSL 657
Query: 83 ------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
SS +N+ + DIND +P F + Y + E + G + + V ATD D
Sbjct: 658 LVLATDLGTPPQSSMTRINVSLLDINDNSPVFYPVQYFAHIKENEPGGSYITTVSATDPD 717
Query: 130 EGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V YS+ + F V+ +G I T ALD E++ Y
Sbjct: 718 LGTNGTVKYSISAGDRSRFQVNTQSGVISTRMALDREEKTAY 759
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 22/168 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y ++D + F ++P+T
Sbjct: 2774 SQIFSAHVPENSPLGYTVTRVTTSDEDIGINAISRYSIMDTSLP----FTINPSTGDIVI 2829
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V I VTD+ND P F Y PE + G
Sbjct: 2830 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFGRPSYYLDCPELTEIGS 2889
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
V +V ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 2890 KVTQVFATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQILKYQN 2937
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 38 ATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGGLSSTAT--- 87
ATD D G G+ YR++ N A F LD G + +GGL T
Sbjct: 159 ATDSDIGSNGVDHRSYRIIRGN--EAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQY 216
Query: 88 -------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
VN+ V DIND P F S Y+ VPE G +V +V A D
Sbjct: 217 QLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAAD 276
Query: 128 ADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ADEG NA + Y + E PF +D TG I + LD+E ++ Y
Sbjct: 277 ADEGTNADIRYRLQDEGTPFQMDPETGLITVREPLDFEARRQY 319
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +A+D DSG +EY LL+ + S +D G + D
Sbjct: 2069 VFKAQASDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATD 2128
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y+ + E G + +V A D DEG N
Sbjct: 2129 KGQPSLSSSTEVIVMVLDINDNNPIFAQTLYKVEINENTLTGTDIIQVFAADGDEGTNGQ 2188
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y + + F +D+ TG I K LD EK Y
Sbjct: 2189 VRYGIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTY 2225
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPIQD--- 78
T++QV A D D G + Y L N D + LD T+ Q +
Sbjct: 2278 TILQVVARDDDQGSNSKLSYVLFGGNEDNTFTLSASGELGVTQSLDRETKEQFVLMITAI 2337
Query: 79 EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNA 134
+GG L+ T T+++ V D+ND P F S Y ++PE G V V+A+DAD NA
Sbjct: 2338 DGGSPALTGTGTISVIVDDVNDNVPTFASKAYFTTIPEDAPTGTDVLLVNASDADASTNA 2397
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
VV + + F ++ +TG I T+ LD E + Y
Sbjct: 2398 VVRI-IGGNSQFTINPSTGQIITSALLDRETKDNY 2431
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 76/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3210 GTTVIHLNATDADSGTNAVIAYTVQSSDSD---LFVIDPNT---GVITTQGFLDFETKQS 3263
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S ATVN+++ N+ P F S Y F + E G VG V A+
Sbjct: 3264 YHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFAS 3323
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F ++ TG I + LD EK+ ERV L
Sbjct: 3324 DRDLGTDGEVHYLIFGNSRKKGFQINKKTGQIYVSGILDREKE----ERVSL 3371
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 71/168 (42%), Gaps = 18/168 (10%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF---NLDPAT 70
D L Y + + +V+A+DKDSG G + Y + + NT DA F L +
Sbjct: 997 DQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGNTGDAFGIFPDGQLYIKS 1056
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E +QD LS+T V + + D+ND P F S Y F E Q G
Sbjct: 1057 ELDRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAG 1116
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
VG+V A D D G N V YS P F + +G+I D E
Sbjct: 1117 SFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHTISGEITNTYQFDRE 1164
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L ATV++ + DIND P+F Y+ ++ E L V RV A+D DEG N +++YS+
Sbjct: 1190 LKDQATVHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSI 1249
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E+ F +D +G + LDYE Y
Sbjct: 1250 IKGNEERQFAIDITSGQVALIGKLDYEATPAY 1281
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 27/171 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGPI--- 76
G ++QV A D D G G V Y +++ NT+ F +D P + P
Sbjct: 2170 GTDIIQVFAADGDEGTNGQVRYGIVNGNTNQE--FRIDSVTGAITVAKPLDREKTPTYHL 2227
Query: 77 ----QDEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDA 128
D G + T+TV+I + DIND P F+ PY +VPE L + +V A D
Sbjct: 2228 TVQAADRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPENLRTLPRTILQVVARDD 2287
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
D+G N+ + Y + ED F + A +G++ ++LD E ++ ++ + I
Sbjct: 2288 DQGSNSKLSYVLFGGNEDNTFTLSA-SGELGVTQSLDRETKEQFVLMITAI 2337
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 71/174 (40%), Gaps = 32/174 (18%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGG--- 81
+ + G ++ Q KA D D G G+V Y L N + + + GP+ + G
Sbjct: 904 ENWQAGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINEKNGTISLLGPLDVQAGSYQ 963
Query: 82 ------------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
LSS+ + + V D+ND +P F L YE ++ E + +V A+D
Sbjct: 964 IEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDK 1023
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYLERV 173
D G N + Y++ E NTGD + LD E Q Y+ V
Sbjct: 1024 DSGANGEIAYTIAE-------GNTGDAFGIFPDGQLYIKSELDRELQDRYVLMV 1070
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 75/162 (46%), Gaps = 22/162 (13%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRL----------LDNNTDAASYF-----NLDPATE 71
++G L++V A D KD G VEY + LDN+T S +L+
Sbjct: 2997 KVGTKLIKVIAIDDKDFGLNSEVEYFISNDNHLGKFKLDNDTGWISVASSLISDLNRNFY 3056
Query: 72 HQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D+G LSS TV I VT+ N PEF ++PE G V V A D
Sbjct: 3057 ITVTAKDKGNPPLSSQTTVEITVTEENYHTPEFSQSHMSATIPESHSIGSIVRTVSARDR 3116
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQ 167
D N ++ YS+ E+ F ++++TG + KALDYE Q
Sbjct: 3117 DAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYELCQ 3158
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1724 AEVEITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTYTIISGA 1783
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ + LD E++ Y
Sbjct: 1784 DDSFRIDPESGDLIATRRLDRERRSKY 1810
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LSS+ +V + VTD+ND P FQ PY +P G V V TDAD G N+ ++YS+
Sbjct: 2446 LSSSTSVLVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSFVFAVTVTDADIGPNSELHYSL 2505
Score = 42.7 bits (99), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
G ++ VNI V D+ND +P F Q++ V Q G ++ + A D DEG N +V Y
Sbjct: 871 GTVTGDTMVNITVKDLNDNSPHFLQAIESVNVVENWQAGHSIFQAKAVDPDEGVNGMVLY 930
Query: 139 SV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
S+ P+++ F ++ G I LD + +E
Sbjct: 931 SLKQNPKNL-FAINEKNGTISLLGPLDVQAGSYQIE 965
Score = 42.4 bits (98), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 70/164 (42%), Gaps = 35/164 (21%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD--EGGLS---------- 83
+ ATD DSG + Y ++ N +F++ +EH G + GGL
Sbjct: 497 ISATDGDSGLNANLRYSIVSGN--GLGWFHI---SEHSGLVTTGAAGGLDRELASQIVLN 551
Query: 84 ------------STATVNIRVTDINDKNPEF-QSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
S A + + + D+ND+ P F Q Y+ SV E G + + ATD D
Sbjct: 552 ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLMLRATDGD 611
Query: 130 EGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V +S+ E F +D +G + T +LD E+Q Y
Sbjct: 612 LGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFY 655
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
SS ++I V D+ND P F+ P+ + E + V A D D G N + Y +
Sbjct: 2649 FSSYEKLDITVLDVNDNAPIFKEDPFISEILENLSPRKILTVSAVDKDSGPNGQLDYEIV 2708
Query: 142 E---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ F ++ TG+IR+ + LD EK Y+
Sbjct: 2709 NGNMENSFSINHATGEIRSVRPLDREKVSYYV 2740
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 70/174 (40%), Gaps = 20/174 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL-------LDNNTDA---ASYFNLD- 67
Y A ++ G + V ATD D G G V+Y + NT + ++ LD
Sbjct: 694 YFAHIKENEPGGSYITTVSATDPDLGTNGTVKYSISAGDRSRFQVNTQSGVISTRMALDR 753
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V I V D D P F + Y F V E G VG
Sbjct: 754 EEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFENVALGYHVG 813
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A+ D N + Y D F ++ TG + T +D E+Q Y +V
Sbjct: 814 SVSASTMDLNSN-ISYLITTGDQKGMFAINQVTGQLTTANVIDREEQSFYQLKV 866
Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N V Y + +
Sbjct: 1515 VTILVTDLNDNVPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEVEYEIINGDTDT 1574
Query: 146 FVVDANTGDIRTNKAL 161
F+VD +GD+R AL
Sbjct: 1575 FIVDRYSGDLRVASAL 1590
Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG + Y + N F++ P T E Q
Sbjct: 1329 RIGELVSSVTATDSDSGDNADLYYSITGTNNHGT--FSISPNTGSIFLAKKLDFETQSLY 1386
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G SST +V I V D ND P F S+ E G +V V A D
Sbjct: 1387 KLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVTAHD 1446
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + Y++ + +P F +D G I TN +D E L+
Sbjct: 1447 PDADINGQLSYTIIQQMPRGNHFTIDEVKGTIYTNAEIDREFANLF 1492
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNAVVYYSV 140
SS A++ I V DIND P F Y ++ E G V + ATD D G NA + YS+
Sbjct: 456 SSVASLVIFVNDINDHPPVFSQQVYRVNLSEEAPPGSYVSGISATDGDSGLNANLRYSI 514
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 3/122 (2%)
Query: 59 DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
++ S++NL H P +STA V+I + D+ND P F S +
Sbjct: 2009 ESQSFYNL-VVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLSPKLTYIPXNTPIDT 2067
Query: 119 AVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
V + A+D D G N+ + Y++ P F + G++R LD E+ Y V
Sbjct: 2068 VVFKAQASDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVAT 2127
Query: 177 SK 178
K
Sbjct: 2128 DK 2129
>gi|195383702|ref|XP_002050565.1| GJ22222 [Drosophila virilis]
gi|194145362|gb|EDW61758.1| GJ22222 [Drosophila virilis]
Length = 3596
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 66/132 (50%), Gaps = 21/132 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP----------------ATEH 72
+G +++QV A+D D G G ++Y L D + + S F +DP A H
Sbjct: 1022 VGTSVIQVSASDPDIGLNGRIKYLLSDRDVEDGS-FVIDPTSGTIRTNKGLDRESVAIYH 1080
Query: 73 QGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
I + G LSST V IR+ D+ND P F S VPE G VG +HA D
Sbjct: 1081 LTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDP 1140
Query: 129 DEGQNAVVYYSV 140
DEG NAVV+YS+
Sbjct: 1141 DEGVNAVVHYSI 1152
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 83/178 (46%), Gaps = 27/178 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY---FNLDPATEH--- 72
Y A + +G T++ V ATD D G + Y L + + + S F ++P T
Sbjct: 902 YSASVFEDAPVGTTVLVVSATDSDVGINAQITYSLNEESINGLSSPDPFTINPQTGAIIT 961
Query: 73 QGPIQDE-------------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
P+ E GG LS T V I VTD+ND P F++ Y+ S+ E
Sbjct: 962 SAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEISVTDVNDNAPAFKNPLYQSSILEDAL 1021
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G +V +V A+D D G N + Y + ED FV+D +G IRTNK LD E +Y
Sbjct: 1022 VGTSVIQVSASDPDIGLNGRIKYLLSDRDVEDGSFVIDPTSGTIRTNKGLDRESVAIY 1079
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 83/189 (43%), Gaps = 42/189 (22%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS--------YFNLDPAT 70
+ A R+ +G T++ ++ATD+D GK +EY + + TD + F +D
Sbjct: 471 FEASIREGATVGSTVITLRATDQDIGKNAEIEYGI-ETVTDGSGVAQDQELPIFRID--- 526
Query: 71 EHQGPIQDEGGL-------------------------SSTATVNIRVTDINDKNPEFQSL 105
G I L ++TA+V +++ D ND P+F
Sbjct: 527 SRSGVISTRSSLDRETSDSYHLLVTASDMAAAQSERKTATASVLVKILDDNDNYPQFSER 586
Query: 106 PYEFSVPEGQ--DGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKA 160
Y VPE Q D V + ATDAD+G NA + Y++ F +D+ +GD+ K
Sbjct: 587 TYTVQVPEDQWGDDNNVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLVKP 646
Query: 161 LDYEKQQLY 169
LDYE + Y
Sbjct: 647 LDYESVRSY 655
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 25/164 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI---------------- 76
+ ++ATD D G + Y ++ NT S F++D + +
Sbjct: 603 VAHIRATDADQGNNAAIRYAIIGGNTQ--SQFSIDSMSGDVSLVKPLDYESVRSYRLVIR 660
Query: 77 -QDEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
QD G S + T + V D ND P F + ++ SV E G + RV A D+DEG
Sbjct: 661 AQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEGA 720
Query: 133 NAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA + YS+ E + P VD+ TG ++T K LD E+Q + +V
Sbjct: 721 NAEISYSISERDDNFPLAVDSRTGWVQTIKPLDREEQSRFAFQV 764
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 55/102 (53%), Gaps = 9/102 (8%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG S TATV+I +TD N+ P F++ PY SV E G V V ATD+D G NA +
Sbjct: 873 DSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGINAQI 932
Query: 137 YYSVPEDI--------PFVVDANTGDIRTNKALDYEKQQLYL 170
YS+ E+ PF ++ TG I T+ LD E YL
Sbjct: 933 TYSLNEESINGLSSPDPFTINPQTGAIITSAPLDRETTSGYL 974
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
S T T+ + V D ND +P F++ +E S+ EG G V + ATD D G+NA + Y +
Sbjct: 447 SGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIE 506
Query: 142 -----------EDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+++P F +D+ +G I T +LD E Y
Sbjct: 507 TVTDGSGVAQDQELPIFRIDSRSGVISTRSSLDRETSDSY 546
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 25/165 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASYFN-LDPATEHQGPIQ 77
+G +++V+A D D G + Y + +D+ T LD + + Q
Sbjct: 704 VGYNIIRVQAYDSDEGANAEISYSISERDDNFPLAVDSRTGWVQTIKPLDREEQSRFAFQ 763
Query: 78 ---DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADE 130
+GG+ S++++V I V D+ND +P F YE +V E Q G V V ATD DE
Sbjct: 764 VVAKDGGVPPKSASSSVVITVQDVNDNDPSFNPKYYEANVGEDQPPGTPVTTVTATDPDE 823
Query: 131 GQNAVVYYSVPEDIP---FVVDANTGD--IRTNKALDYEKQQLYL 170
++ ++Y + F + + G I ++LDY++++ +L
Sbjct: 824 --DSRLHYEISTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFL 866
>gi|195429581|ref|XP_002062836.1| GK19483 [Drosophila willistoni]
gi|194158921|gb|EDW73822.1| GK19483 [Drosophila willistoni]
Length = 3590
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 79/172 (45%), Gaps = 28/172 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP----------------ATEH 72
+G +++QV A+D D G G ++Y L D + + S F +DP A H
Sbjct: 1016 VGTSVIQVSASDPDIGLNGRIKYLLSDRDVEDGS-FVIDPTSGTIRTNKGLDRESVAIYH 1074
Query: 73 QGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
I + G LSST V IR+ D+ND P F S VPE G VG +HA D
Sbjct: 1075 LTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDP 1134
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIR----TNKALDYEKQQLYLERV 173
DEG NAVV+YS+ + F + G R T LDYE + E V
Sbjct: 1135 DEGVNAVVHYSIIGGDDSNAFSLVTRPGSERAQLLTMTELDYESSRKRFELV 1186
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 84/188 (44%), Gaps = 38/188 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL-------------------LDNNTD 59
+ A R+ +G T++ ++ATD+D GK +EY + +D+ +
Sbjct: 463 FEASIREGATVGSTVITLRATDQDIGKNAEIEYGIEAVTDGSGLAQTQEMPIFRIDSRSG 522
Query: 60 AASY-----------FNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYE 108
S +NL Q E ++TA+V ++V D ND P+F Y
Sbjct: 523 VISTRSSLDRETSDSYNLVVTASDMASAQSERK-TATASVLVKVLDDNDNYPQFSERTYT 581
Query: 109 FSVPEGQDGLA----VGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL 161
VPE Q G + V + ATDAD+G NA + Y++ F +D+ +GD+ K L
Sbjct: 582 VQVPEDQWGSSEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLVKPL 641
Query: 162 DYEKQQLY 169
DYE + Y
Sbjct: 642 DYESVRSY 649
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 79/168 (47%), Gaps = 27/168 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPATEH---QGPIQDE--- 79
+G T++ V ATD D G + Y L + N A F+++ T P+ E
Sbjct: 906 VGTTVLVVSATDSDVGINAQITYSLNEESINGLGTADPFSINQQTGAIVTNAPLDRETTS 965
Query: 80 ----------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHA 125
GG LS T V I VTD+ND P F++ Y+ S+ E G +V +V A
Sbjct: 966 GYLLTVTAKDGGNPSLSDTTDVEISVTDVNDNAPMFKNPLYQSSILEDALVGTSVIQVSA 1025
Query: 126 TDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+D D G N + Y + ED FV+D +G IRTNK LD E +Y
Sbjct: 1026 SDPDIGLNGRIKYLLSDRDVEDGSFVIDPTSGTIRTNKGLDRESVAIY 1073
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 76/165 (46%), Gaps = 25/165 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------- 76
T+ ++ATD D G + Y ++ NT S F++D + +
Sbjct: 596 TVAHIRATDADQGNNAAIRYAIIGGNTQ--SQFSIDSMSGDVSLVKPLDYESVRSYRLVI 653
Query: 77 --QDEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
QD G S + T + V D ND P F + ++ SV E G + RV A D+DEG
Sbjct: 654 RAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEG 713
Query: 132 QNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA + YS+ E + P VD TG ++T K LD E+Q + +V
Sbjct: 714 ANAEISYSISERDDNFPLAVDPRTGWVQTIKQLDREEQSRFTFQV 758
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 55/102 (53%), Gaps = 9/102 (8%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG S TATV+I +TD N+ P F++ PY SV E G V V ATD+D G NA +
Sbjct: 867 DSGGRSDTATVHINITDANNFAPIFENAPYSSSVFEDAPVGTTVLVVSATDSDVGINAQI 926
Query: 137 YYSVPEDI--------PFVVDANTGDIRTNKALDYEKQQLYL 170
YS+ E+ PF ++ TG I TN LD E YL
Sbjct: 927 TYSLNEESINGLGTADPFSINQQTGAIVTNAPLDRETTSGYL 968
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
S T T+ + V D ND +P F++ +E S+ EG G V + ATD D G+NA + Y +
Sbjct: 439 SGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIE 498
Query: 141 ----------PEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+++P F +D+ +G I T +LD E Y
Sbjct: 499 AVTDGSGLAQTQEMPIFRIDSRSGVISTRSSLDRETSDSY 538
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 29/167 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP-- 75
+G +++V+A D D G + Y + + + + +DP T E Q
Sbjct: 698 VGYNIIRVQAYDSDEGANAEISYSISERDDNFP--LAVDPRTGWVQTIKQLDREEQSRFT 755
Query: 76 ---IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDA 128
+ +GG+ S++++V I V D+ND +P F YE +V E Q G V V ATD
Sbjct: 756 FQVVAKDGGVPPKSASSSVVITVQDVNDNDPNFNPKYYEANVGEDQPPGTPVTTVTATDP 815
Query: 129 DEGQNAVVYYSVPEDIP---FVVDANTGD--IRTNKALDYEKQQLYL 170
DE ++ ++Y + F + + G I ++LDY++++ +L
Sbjct: 816 DE--DSRLHYEISTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFL 860
>gi|194884197|ref|XP_001976182.1| GG20142 [Drosophila erecta]
gi|190659369|gb|EDV56582.1| GG20142 [Drosophila erecta]
Length = 3582
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------- 68
S Y A + +G +++QV A+D D G G ++Y L D + + S F +DP
Sbjct: 1009 SPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDVEDGS-FVIDPTSGTIRT 1067
Query: 69 ---------ATEHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
A H I + G LSST V IR+ D+ND P F S VPE
Sbjct: 1068 NKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSP 1127
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV 140
G VG +HA D DEG NAVV+YS+
Sbjct: 1128 VGSVVGEIHAHDPDEGVNAVVHYSI 1152
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 84/191 (43%), Gaps = 44/191 (23%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--------FNLDPAT 70
+ A R+ +G T++ ++ATD+D GK +EY + + TD A F +D
Sbjct: 469 FEASIREGATVGSTVITLRATDQDIGKNAEIEYGI-EAVTDGAGLAQDQEMPIFRID--- 524
Query: 71 EHQGPIQDEGGL-------------------------SSTATVNIRVTDINDKNPEFQSL 105
G I L ++TA+V ++V D ND P+F
Sbjct: 525 SRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSER 584
Query: 106 PYEFSVPEGQDGLA----VGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTN 158
Y VPE Q G A V + ATDAD+G NA + Y++ F +D+ +GD+
Sbjct: 585 TYTVQVPEDQWGGAEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLV 644
Query: 159 KALDYEKQQLY 169
K LDYE + Y
Sbjct: 645 KPLDYESVRSY 655
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 56/102 (54%), Gaps = 9/102 (8%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG S TATV+I +TD N+ P F++ PY SV E G V V ATD+D G NA +
Sbjct: 873 DSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQI 932
Query: 137 YYSVPEDI--------PFVVDANTGDIRTNKALDYEKQQLYL 170
YS+ E+ PF ++ TG I TN ALD E YL
Sbjct: 933 TYSLNEESINGLGSPDPFSINPQTGAIVTNAALDRETTSGYL 974
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 83/181 (45%), Gaps = 33/181 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPATEHQGP 75
Y A + +G T++ V ATD D G + Y L + N + F+++P T G
Sbjct: 902 YSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQT---GA 958
Query: 76 I-------------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
I +GG LS T V I VTD+ND P F+S Y+ S+ E
Sbjct: 959 IVTNAALDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPSFKSPLYQASILE 1018
Query: 114 -GQDGLAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQL 168
G +V +V A+D D G N + Y + ED FV+D +G IRTNK LD E +
Sbjct: 1019 DALVGTSVIQVAASDPDVGLNGRIKYLLSDRDVEDGSFVIDPTSGTIRTNKGLDRESVAV 1078
Query: 169 Y 169
+
Sbjct: 1079 F 1079
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 25/158 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------- 76
T+ ++ATD D G + Y ++ NT S F++D + +
Sbjct: 602 TVAHIRATDADQGNNAAIRYAIIGGNTQ--SQFSIDSMSGDVSLVKPLDYESVRSYRLVI 659
Query: 77 --QDEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
QD G S + T + V D ND P F + ++ SV E G + RV A D+DEG
Sbjct: 660 RAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEG 719
Query: 132 QNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQ 166
NA + YS+ E + P VD TG ++T K LD E+Q
Sbjct: 720 ANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQ 757
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
S T T+ + V D ND +P F++ +E S+ EG G V + ATD D G+NA + Y +
Sbjct: 445 SGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIE 504
Query: 142 -----------EDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+++P F +D+ +G I T +LD E Y
Sbjct: 505 AVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSY 544
Score = 43.1 bits (100), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 29/167 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP-- 75
+G +++V+A D D G + Y + + + + +DP T E QG
Sbjct: 704 VGYNIIRVQAYDSDEGANAEITYSISERDDNFP--LAVDPRTGWVQTIKPLDREEQGRFA 761
Query: 76 ---IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDA 128
+ +GG+ S++++V I V D+ND +P F YE +V E Q G V V ATD
Sbjct: 762 FQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDP 821
Query: 129 DEGQNAVVYYSVPEDIP---FVVDANTGD--IRTNKALDYEKQQLYL 170
DE ++ ++Y + F + + G I ++LDY++++ +L
Sbjct: 822 DE--DSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFL 866
>gi|338725210|ref|XP_001494282.3| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 2 [Equus caballus]
Length = 3016
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 84/181 (46%), Gaps = 26/181 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS-YFNLDPAT---EHQG 74
Y R+ E+G ++ V+ATD D+ + YRLL+ + S F +DP + +G
Sbjct: 388 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEVFEIDPRSGVIRTRG 447
Query: 75 PI------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D G S+TA V + V D ND P+F Y V E
Sbjct: 448 PVDREEVESYQLTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYVVQVREDVT 507
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLER 172
G V RV A+D D+G NA+V+YS+ F +DA TG + LDYE + Y R
Sbjct: 508 PGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLR 567
Query: 173 V 173
+
Sbjct: 568 I 568
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 77/173 (44%), Gaps = 22/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-------------DAASYFN 65
Y R+ G +++V A+D+D G LV Y ++ N D S +
Sbjct: 498 YVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 557
Query: 66 LDPATEHQGPIQDEGG----LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
+ E+ I+ + G LS+ + V ++V DIND P F S P++ +V E G
Sbjct: 558 YETTKEYTLRIRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 617
Query: 120 VGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V A DAD G NA + Y V D PF ++ TG I LD E+ Y
Sbjct: 618 VLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFY 670
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------------AASYFNLDPATEHQ-- 73
+G +++ V A D+D+ ++ Y++ NT + LD E Q
Sbjct: 719 VGTSVVTVSAVDRDA--HSVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYV 776
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G TA V + VTD N P FQS Y +V E + G V + ATD D G
Sbjct: 777 LAVTASDGTRQDTAQVVVNVTDANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 836
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + IP F +DA+TG + T LDYE Q Y
Sbjct: 837 ENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSY 875
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 33/181 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPATE---- 71
Y A + G + ++A D D G+ G +EY L D+ ++ +F+LDP T
Sbjct: 280 YQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSN--HFFSLDPITGAVTT 337
Query: 72 -------------HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ QD G S+ AT+ I VTD ND +P F+ Y+ S+ E +
Sbjct: 338 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 397
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV-------PEDIPFVVDANTGDIRTNKALDYEKQQL 168
G V V ATD D NA + Y + P ++ F +D +G IRT +D E+ +
Sbjct: 398 VGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEV-FEIDPRSGVIRTRGPVDREEVES 456
Query: 169 Y 169
Y
Sbjct: 457 Y 457
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLDPATEHQGPIQD- 78
+++Q+ ATD+DSG G V Y + + LD Q ++
Sbjct: 927 SVLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYILRAY 986
Query: 79 --EGGLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
+ G+ T V + V D+ND P F+ ++ V E GLAV RV ATD DEG
Sbjct: 987 AVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGT 1046
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 1047 NAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYEDRPEYI 1087
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSSTA 86
G T++ + ATD+D+G+ + Y + D+ F +D A Q + E +S T
Sbjct: 822 GTTVVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTL 877
Query: 87 TVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
+ R V D+ND P+F Y+ S+ E +V ++ ATD D
Sbjct: 878 AITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSIYEDVPPFTSVLQISATDRD 937
Query: 130 EGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N V+Y+ D F+V++ +G +RT + LD E Y+ R + + K
Sbjct: 938 SGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYILRAYAVDK 990
Score = 42.7 bits (99), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 32/163 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G+ + +V ATD D G + Y++++ N F LD + + D
Sbjct: 1030 IGLAVARVTATDPDEGTNAQIMYQIVEGNI--PEVFQLDIFSGELTALVDLDYEDRPEYI 1087
Query: 79 ------EGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRV 123
L S ATV++R+ D ND P + F S P G A+GRV
Sbjct: 1088 LVIQATSAPLVSRATVHVRLLDRNDNPPVLGNFEILFNNYVTNRSSSFPGG----AIGRV 1143
Query: 124 HATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
A D D + + ++ V ++A+TG++R ++ALD +
Sbjct: 1144 PAHDPDISDSLTYSFERGNELSLVLLNASTGELRLSRALDNNR 1186
Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 32/136 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASY-------------FN 65
LG ++ V+A D D+G +EYRL ++N T S F
Sbjct: 614 LGYLVLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFYSFG 673
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
++ A +H P L+++A+V + + D+ND NP F Y + E G +V V
Sbjct: 674 VE-ARDHGTP-----ALTASASVTVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVS 727
Query: 125 ATDADEGQNAVVYYSV 140
A D D ++V+ Y +
Sbjct: 728 AVDRDA--HSVITYQI 741
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 100 PEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV------PEDIPFVVDANT 152
P+FQ Y+ +VPE Q G V + A D DEG+ + Y++ + F +D T
Sbjct: 273 PQFQPPSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNHFFSLDPIT 332
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G + T + LD E + ++ RV
Sbjct: 333 GAVTTAEELDRETKSTHVFRV 353
>gi|431899688|gb|ELK07642.1| Protocadherin Fat 4 [Pteropus alecto]
Length = 2137
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 75/164 (45%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F +DP + E +
Sbjct: 101 GSKIMQLTAMDADEGANALVTYTIISGADDS---FRIDPESGDLIATRRLDRERRSKYSL 157
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G SS +NI V+D+ND +P+F Y F +PE G V + ATD D G
Sbjct: 158 LVRADDGLQSSDMRINITVSDVNDHSPKFSRPVYSFDIPEDTTPGSLVAAILATDDDSGV 217
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG + LDYE QQ Y+ V
Sbjct: 218 NGEITYIVNEDDEDGIFFLNPVTGVFNLTRVLDYESQQYYILTV 261
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 80/168 (47%), Gaps = 26/168 (15%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLDPATE 71
+ H +G + V A D+D+ G++ Y + N A + + +
Sbjct: 1445 ESHSIGAMVRTVSARDRDAAMNGVIRYSISSGNEGGVFAINSSTGVLTLAKALDYELCQK 1504
Query: 72 HQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEF---SVPEGQDGLAVGRVH 124
H+ + D G ++ T +V + V D+ND +P F LP E+ + G V ++
Sbjct: 1505 HEMTVSATDGGWVARTGYCSVTVNVIDVNDNSPVF--LPDEYLPTVLENAPSGTTVIHLN 1562
Query: 125 ATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ATDAD G NAV+ Y+V D+ FV+D NTG I T LD+E +Q Y
Sbjct: 1563 ATDADSGTNAVIAYAVQSSDSDL-FVIDPNTGVITTQGFLDFETKQSY 1609
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 24/162 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V A DKDSG G ++Y +++ N + + F+++ AT I+
Sbjct: 1032 ILTVSAMDKDSGPNGQIDYEIVNGNKEHS--FSINHATGEIRSIRPLDREKISQYVLTIK 1089
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G S + +V I + D ND P+F + + VPE G V RV +D D G
Sbjct: 1090 SSDKGSPSQSTSVKVIINILDENDNAPKFSQI-FSAHVPENSPLGYTVTRVTTSDEDVGV 1148
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NAV YS+ + +PF ++ +TGDI ++ L+ E Y RV
Sbjct: 1149 NAVSRYSIIDRSLPFTINPSTGDIVISRPLNREDTDRYRIRV 1190
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 22/167 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y ++D + F ++P+T
Sbjct: 1119 SQIFSAHVPENSPLGYTVTRVTTSDEDVGVNAVSRYSIIDRSLP----FTINPSTGDIVI 1174
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V I VTD+ND P F Y PE + G
Sbjct: 1175 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPELSEIGS 1234
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
V +V ATD DEG N V+Y + F ++A TG+I + + L Y+
Sbjct: 1235 KVTQVSATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFSKQVLKYQ 1281
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 71/165 (43%), Gaps = 20/165 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEG-------- 80
L + + +ATD DSG VEY LL + S +D G + E
Sbjct: 408 LDTVVFKAQATDPDSGPNSYVEYALLSPSGSKFSIGTIDAEVRLTGELDREAVSNYTLTV 467
Query: 81 --------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEG 131
LSS+A V + V DIND +P F Y + E G V +V A DADEG
Sbjct: 468 LATDKGQPALSSSAEVVVVVLDINDNSPAFAQALYRVEMSEDTLTGTDVVQVCAADADEG 527
Query: 132 QNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
N V Y + + D F +D+ TG + + LD EK YL V
Sbjct: 528 TNGQVRYGIVDGNADQDFRIDSVTGAVTVARPLDREKTSTYLLTV 572
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQGPI 76
++G L++V A D KD G VEY + LDNNT S + + +Q +
Sbjct: 1342 KVGTKLIKVTAVDDKDFGLNSEVEYFVSGENHSGKFKLDNNTGWISVASSLISDLNQNFL 1401
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D+G LSS ATV I VT+ N PEF ++PE G V V A D
Sbjct: 1402 ITVTAKDKGNPPLSSQATVQIVVTEENYHTPEFSQTHVTAALPESHSIGAMVRTVSARDR 1461
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
D N V+ YS+ E F ++++TG + KALDYE Q +
Sbjct: 1462 DAAMNGVIRYSISSGNEGGVFAINSSTGVLTLAKALDYELCQKH 1505
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 78/168 (46%), Gaps = 25/168 (14%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPA 69
GA+ R T++QV A D D G + Y L+ N D A + LD
Sbjct: 616 GALPR-------TVLQVVARDDDQGLNSKLSYVLVGGNEDNAFTLSAGGELRVTRSLDRE 668
Query: 70 TEHQGPIQ----DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGR 122
T+ + + D G L+ T TV++ V D ND P F S Y +VPE G V
Sbjct: 669 TKERFVLTITATDSGSPALTGTGTVHVVVDDANDNIPTFASKMYFTAVPEDAPTGTDVLL 728
Query: 123 VHATDADEGQNAVVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V+A+DAD NAV+ Y + + F ++ +TG I T+ LD E + Y
Sbjct: 729 VNASDADASTNAVISYRIIGGNSQFTINPSTGQIITSALLDRETKDNY 776
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 85/183 (46%), Gaps = 34/183 (18%)
Query: 10 LEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD---------- 59
+EM+ D+L G ++QV A D D G G V Y ++D N D
Sbjct: 504 VEMSEDTL-----------TGTDVVQVCAADADEGTNGQVRYGIVDGNADQDFRIDSVTG 552
Query: 60 ---AASYFNLDPATEHQGPIQ--DEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
A + + + + +Q D G + T+TV+I + D ND P F+ PY +VP
Sbjct: 553 AVTVARPLDREKTSTYLLTVQAADRGSTPRTDTSTVSIVLLDSNDFVPTFELSPYSINVP 612
Query: 113 EGQDGL--AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQ 167
E L V +V A D D+G N+ + Y + ED F + A G++R ++LD E ++
Sbjct: 613 ENLGALPRTVLQVVARDDDQGLNSKLSYVLVGGNEDNAFTLSAG-GELRVTRSLDRETKE 671
Query: 168 LYL 170
++
Sbjct: 672 RFV 674
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 76/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 1555 GTTVIHLNATDADSGTNAVIAYAVQSSDSD---LFVIDPNT---GVITTQGFLDFETKQS 1608
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S ATVNI++ N+ P F S Y F + E G VG V A+
Sbjct: 1609 YHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKRYYFEISEAAPRGTLVGEVFAS 1668
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F ++ TG I + LD EK+ ERV L
Sbjct: 1669 DRDLGADGEVHYLIFGNSRKKGFQINKKTGQIYVSGLLDREKE----ERVSL 1716
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 68/148 (45%), Gaps = 32/148 (21%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI 76
+++ A+ D G ++ V A+D D+ ++ YR++ N S F ++P+T G I
Sbjct: 711 MYFTAVPEDA-PTGTDVLLVNASDADASTNAVISYRIIGGN----SQFTINPST---GQI 762
Query: 77 --------------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
D G LSS+ +V + VTD+ND P FQ PY +P
Sbjct: 763 ITSALLDRETKDNYTLVVVASDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIPS 822
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYSV 140
G V V TDAD G N+ ++YS+
Sbjct: 823 TTSPGSFVFAVTVTDADIGPNSELHYSL 850
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE--DI 144
V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++ D
Sbjct: 71 VEITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTYTIISGADD 130
Query: 145 PFVVDANTGDIRTNKALDYEKQQLY 169
F +D +GD+ + LD E++ Y
Sbjct: 131 SFRIDPESGDLIATRRLDRERRSKY 155
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 70/159 (44%), Gaps = 20/159 (12%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY-------FNLDPATEHQGP------- 75
G + + ATD DSG G + Y + +++ D + FNL +++
Sbjct: 202 GSLVAAILATDDDSGVNGEITYIVNEDDEDGIFFLNPVTGVFNLTRVLDYESQQYYILTV 261
Query: 76 -IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
+D GG +T V + D+ND P F Y S+ E G V + TDAD+G N
Sbjct: 262 RAEDGGGQFTTIRVYFNILDVNDNPPVFSLNSYSTSLMENLPLGSTVLVFNVTDADDGIN 321
Query: 134 AVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ + YS+ F VD N G + K+LD E Q Y
Sbjct: 322 SQLAYSIASGDSLGQFAVDKN-GVLTVLKSLDRESQSFY 359
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV- 140
SS ++I V D+ND +P F+ P+ + E + V A D D G N + Y +
Sbjct: 994 FSSYEKLDITVLDVNDNSPVFKEDPFVSEILENLSPRKILTVSAMDKDSGPNGQIDYEIV 1053
Query: 141 --PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
++ F ++ TG+IR+ + LD EK Y+
Sbjct: 1054 NGNKEHSFSINHATGEIRSIRPLDREKISQYV 1085
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
+STA V+I + D+ND P F S P +PE V + ATD D G N+ V Y++
Sbjct: 375 NSTAQVSIILLDVNDNPPTFLS-PRLTYIPENTPLDTVVFKAQATDPDSGPNSYVEYALL 433
Query: 141 -PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
P F + ++R LD E Y V K
Sbjct: 434 SPSGSKFSIGTIDAEVRLTGELDREAVSNYTLTVLATDK 472
>gi|301779203|ref|XP_002925014.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16-like [Ailuropoda
melanoleuca]
Length = 3271
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 82/162 (50%), Gaps = 28/162 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGP- 75
G +++V A D D G G V Y L +F++DP + E Q
Sbjct: 486 GSFVVRVMARDPDQGSNGRVTYSLAPGAH--TRWFSIDPTSGIITTAASLDYELEPQPQL 543
Query: 76 --IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ +GGL +S+ATV++ + D+ND P+FQ Y S+PEG Q G +V ATDAD
Sbjct: 544 IVVATDGGLPALASSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDAD 603
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEK 165
G ++ YS+ + PF +DA++GD+ T + LD ++
Sbjct: 604 SGPFGLLSYSLGAGLGASGSPPFRIDAHSGDVCTTRTLDRDQ 645
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 22/161 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--TDAASYFNLDPAT--- 70
SL ++A ++ G + + A D D+G FG + Y LL+ ++ F L+ +T
Sbjct: 2682 SLLSTSLAENQPP-GTLVTTLHAIDGDAGAFGRLRYSLLEAGPGSEGREAFALNSSTGEL 2740
Query: 71 --------EHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
EH G Q D G LS++ TV++ VT ++ +P F + + F VPEG +
Sbjct: 2741 RARVAFDYEHTGSFQLLVGAADAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQVPEGAR 2800
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDI 155
G ++G V ATD D G + +V YS+ P F ++ TG +
Sbjct: 2801 RGYSLGHVQATDEDGGADGLVLYSLATSSPYFGINQTTGAL 2841
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 27/177 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + R+ G +L+ ++ATD D G G V Y + + F+LDP T
Sbjct: 1627 YSVLLRENSPPGTSLLTLRATDPDLGANGQVTYGGISGES-----FSLDPDTGVLTTLRA 1681
Query: 71 ---EHQGPI------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
E Q I +D G L + TV + V D ND P F S VPEGQD
Sbjct: 1682 LDREEQEEINLTVYARDRGSPPLLTHVTVRVAVEDENDHAPTFGSAHLSLEVPEGQDPQT 1741
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ + A+D D G N + Y + + P FV+D +G+ T + LD E + + R+
Sbjct: 1742 LTVLRASDPDVGANGQLQYLILDGDPSGAFVLDLASGEFGTTRPLDREVEPAFQLRI 1798
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 73/162 (45%), Gaps = 28/162 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQ 73
+G L+ V+A+D D G GLV + L ++ D + F LD ++ HQ
Sbjct: 2590 VGAELLHVEASDADPGPHGLVRFTL--SSGDPSGLFELDESSGALRLAHPLDCETQARHQ 2647
Query: 74 GPIQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
+Q G + A V I V D+ND P F S+ E Q G V +HA D D
Sbjct: 2648 LVVQAADPAGAHFALAPVTIEVQDVNDHGPVFPLSLLSTSLAENQPPGTLVTTLHAIDGD 2707
Query: 130 EGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYE 164
G + YS+ E P F ++++TG++R A DYE
Sbjct: 2708 AGAFGRLRYSLLEAGPGSEGREAFALNSSTGELRARVAFDYE 2749
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 64/146 (43%), Gaps = 26/146 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY--------------RLLDNNTDAASY 63
FY A + + G +QV ATD DSG FGL+ Y R+ ++ D +
Sbjct: 579 FYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGASGSPPFRIDAHSGDVCTT 638
Query: 64 FNLDPATEHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEG 114
LD QGP D GGL S V + V+D ND P+F Y S+ +
Sbjct: 639 RTLD---RDQGPSSFDFTVTAVDGGGLKSMVYVKVFVSDENDNPPQFYPREYAASLSAQS 695
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV 140
G AV RV A D D+G + + Y +
Sbjct: 696 MPGTAVLRVRAHDPDQGPHGRLSYHI 721
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 67/158 (42%), Gaps = 30/158 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPI--- 76
G L+Q++A D D+ G V Y L T AA F L+P++ Q P
Sbjct: 1844 GTLLLQLQAHDPDAEANGRVTYYL---GTGAAGAFLLEPSSGELRTATALDREQCPSYAF 1900
Query: 77 -------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-----GQDGLAVGRVH 124
G LS+T V I V D+ND P F + P +P LA+ +
Sbjct: 1901 SVSAVDGAAAGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGPSLSTPTLALATLR 1960
Query: 125 ATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKA 160
A D D G NA + Y + P VD+ TG+IR ++
Sbjct: 1961 AEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVTRS 1998
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A +++ + DIND P F Y V E G V +V+A+DAD G N V Y +
Sbjct: 236 ALLDVTLLDINDHAPAFNQSRYHAVVSESLAPGSPVLQVYASDADAGPNGAVTYEINRRQ 295
Query: 143 ---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D PF +DA+TG +R + LD+E+++++
Sbjct: 296 SEGDGPFSIDAHTGLLRLERPLDFEQRRVH 325
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY 138
G + TATV + + + ND +P P +V E Q G +VGRV ATD D G N + Y
Sbjct: 1080 GQQTGTATVRVSILNQNDHSPRLSEEPTFLAVAENQPPGTSVGRVFATDRDSGPNGRLTY 1139
Query: 139 S---VPEDI-PFVVDANTGDIRTNKALDYEKQQLY 169
S + ED F + TG++ T + LD E+Q Y
Sbjct: 1140 SLRPLSEDSNAFRIHPQTGEMTTLQTLDRERQSSY 1174
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 76/173 (43%), Gaps = 20/173 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL---------------DPATEHQGPI 76
TL ++A+D D G G ++Y +LD + A +L +PA + +
Sbjct: 1741 TLTVLRASDPDVGANGQLQYLILDGDPSGAFVLDLASGEFGTTRPLDREVEPAFQLRIEA 1800
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQN 133
+D G LS+T V + V D ND P F Y VPE G + ++ A D D N
Sbjct: 1801 RDGGQPALSATLLVTVTVLDANDHAPAFPVPAYSVEVPEDAPAGTLLLQLQAHDPDAEAN 1860
Query: 134 AVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSYL 184
V Y + F+++ ++G++RT ALD E+ Y V + A L
Sbjct: 1861 GRVTYYLGTGAAGAFLLEPSSGELRTATALDREQCPSYAFSVSAVDGAAAGPL 1913
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYF-NLDP----------- 68
G + V A D D G+ V YRL L ++T A S +LD
Sbjct: 1534 GPVALHVVARDPDLGEAARVSYRLAAGGDGYFRLHSSTGALSVVRSLDREQRAEHILTVV 1593
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
A++H P + S+T + + V D+ND+ P FQ Y + E G ++ + ATD
Sbjct: 1594 ASDHGSPPR-----SATQLLTVSVADVNDEAPAFQQQEYSVLLRENSPPGTSLLTLRATD 1648
Query: 128 ADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQ 167
D G N V Y F +D +TG + T +ALD E+Q+
Sbjct: 1649 PDLGANGQVTYGGISGESFSLDPDTGVLTTLRALDREEQE 1688
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 35/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G ++ +V ATD+DSG G + Y L + D+ + F + P T E Q
Sbjct: 1118 GTSVGRVFATDRDSGPNGRLTYSLRPLSEDS-NAFRIHPQTGEMTTLQTLDRERQSSYQL 1176
Query: 76 ---IQDEGG--LSSTATVNIRVTDINDKNPEF--------QSLPYEF--SVPEGQDGLAV 120
+QD G S+T TV+I V D+ND +P F LP + VP G V
Sbjct: 1177 LVQVQDGGSPPRSTTGTVHIAVLDLNDNSPSFLQASGAAGGGLPIQVPDRVPPGT---LV 1233
Query: 121 GRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ A D DEG+N + Y++ P F + ++G++ T L ++ Y+
Sbjct: 1234 TTLQAKDPDEGENGTILYTLTGPGSELFSLHPHSGELLTAAPLIRAERPHYV 1285
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 76/179 (42%), Gaps = 32/179 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG---- 74
Y A + G +++V+A D D G G + Y +L N F LD EH G
Sbjct: 687 YAASLSAQSMPGTAVLRVRAHDPDQGPHGRLSYHILAGNN--PPLFALD---EHSGLLTV 741
Query: 75 --PI--------------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ QD GGL + +A VN+ + P F+ L Y FSVPE
Sbjct: 742 AWPLARRANSVVQLEIGAQDGGGLQAEPSARVNVSIMPGTPVPPVFEQLQYVFSVPEDVA 801
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
G +VG V A + G+ V ++ P F +D +G ++T + LD E LE
Sbjct: 802 PGTSVGIVQAHNP-PGRLGSVTLALSGGDPRGLFSLDGASGLLQTLRPLDRELLGPVLE 859
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
SS V + V D+ND P F Y +VPE G + V A+DAD G + +V +++
Sbjct: 2556 SSAVPVTVTVLDVNDNPPVFSRASYRMAVPEDTPVGAELLHVEASDADPGPHGLVRFTLS 2615
Query: 142 EDIP---FVVDANTGDIRTNKALDYEKQQLY 169
P F +D ++G +R LD E Q +
Sbjct: 2616 SGDPSGLFELDESSGALRLAHPLDCETQARH 2646
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 71/180 (39%), Gaps = 39/180 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + L L+QV+A D D G G + Y L + A F++DP
Sbjct: 2149 YVAFLPESRPLEGPLLQVEADDLDQGPSGQISYSLAASQP-ARGLFHVDPATGTITTTAI 2207
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
AT+ P L +AT+ + V D ND P P+E V E
Sbjct: 2208 LDREIWAETRLVLMATDRGSP-----ALVGSATLTVMVIDTNDNRPTIPQ-PWELQVSED 2261
Query: 114 GQDGLAVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + +V D D G V++Y S P+D PF + G + LD+E++ Y
Sbjct: 2262 ALLGSEIAQVTGNDVDSG--PVLWYVLSPSGPQD-PFSIGRYGGRLSLTGPLDFEQRDRY 2318
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 82 LSSTATVNIRVTDINDKNPEF-------QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
L + AT + VTD+ND P F + LP E ++P G V RV A D D+G N
Sbjct: 449 LRAEATFVLHVTDVNDNAPTFDRQLYRPEPLP-EVALP----GSFVVRVMARDPDQGSNG 503
Query: 135 VVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
V YS+ F +D +G I T +LDYE
Sbjct: 504 RVTYSLAPGAHTRWFSIDPTSGIITTAASLDYE 536
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 28/135 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------------ATEHQGP-- 75
G ++ V ATD+DSG G + Y L A F++DP A +GP
Sbjct: 2365 GSAILSVSATDRDSGANGHISYHL----ASPAEGFSVDPNNGTLFTTVGTVAFGQEGPGV 2420
Query: 76 ------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHAT 126
+D G G ++ ATV++++ D ND P F Y +V E G + + AT
Sbjct: 2421 VDVVLEARDHGMPGRAARATVHVQLQDQNDHTPSFTLPHYRVAVTEDLPPGSTLLTLEAT 2480
Query: 127 DADEGQ-NAVVYYSV 140
DAD + +A V YS+
Sbjct: 2481 DADGSRTHATVDYSI 2495
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 69/173 (39%), Gaps = 31/173 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH----------------- 72
G + ++A D D+G V + LL A F +DP T H
Sbjct: 907 GTPIYTLRALDPDAGVNSRVTFTLLAGGGGA---FTVDPTTGHVRLMGPLGPPGGPAHEL 963
Query: 73 QGPIQDEGGLSSTATVNIRVT--DINDKN--PEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+ +D G T+ +RV D+ + P F S Y +P G G V +V A
Sbjct: 964 ELEARDGGSPPRTSHFRLRVVVQDLGTRGLAPHFDSPTYHVDLPSGTSPGTQVLQVQAQA 1023
Query: 128 ADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D G + Y + D P F ++ +G + ALD E Q+LY +V +S
Sbjct: 1024 PDGGP---ITYHLAADGPSNPFGLEPQSGWLWVRAALDREAQELYTLKVMAVS 1073
>gi|449274415|gb|EMC83598.1| Cadherin-19 [Columba livia]
Length = 778
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 29/178 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------ATEHQGPIQDE--- 79
G ++ QV ATD D +G RLL + YF+++P A+E +D+
Sbjct: 165 GTSVTQVTATDGDDPSYG-NSARLLYSLIQGQPYFSVEPKTGVIRMASEMDRETKDQYLV 223
Query: 80 -----------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
G S+TATV I ++D+ND P+FQ Y +V E G VG+V+A D
Sbjct: 224 IIQAKDMVGQAGAFSATATVTINLSDVNDNPPKFQQRLYYMNVSEDAPVGTTVGKVYAED 283
Query: 128 ADEGQNAVVYYSVP---EDIPFVVDAN---TGDIRTNKALDYEKQQLYLERVFLISKF 179
+D G+NA + YS+ D+ ++ N G I K +DYE ++ Y R +I+++
Sbjct: 284 SDIGENAAMNYSIEGHDSDVFDIITNNETQEGIILLKKRVDYESKRRYSIRAKVINRY 341
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I V DIND P+F PY +VPE +G +V +V ATD D+ G +A + YS+ + P
Sbjct: 137 INVRDINDHEPQFLDGPYVATVPEMSPEGTSVTQVTATDGDDPSYGNSARLLYSLIQGQP 196
Query: 146 -FVVDANTGDIRTNKALDYEKQQLYL 170
F V+ TG IR +D E + YL
Sbjct: 197 YFSVEPKTGVIRMASEMDRETKDQYL 222
>gi|444724739|gb|ELW65337.1| Cadherin EGF LAG seven-pass G-type receptor 2, partial [Tupaia
chinensis]
Length = 2958
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 83/181 (45%), Gaps = 26/181 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-NTDAASYFNLDPAT---EHQG 74
Y R+ E+G ++ V+ATD D+ + YRLL+ + F +DP + +G
Sbjct: 262 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGPGAGPSEVFEIDPRSGVIRTRG 321
Query: 75 PI------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D G S+TA V + V D ND P+F Y V E
Sbjct: 322 PVDREEVESYQLTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYVVQVREDVT 381
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLER 172
G V RV A+D D+G NA+V+YS+ F +DA TG + LDYE + Y R
Sbjct: 382 PGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLR 441
Query: 173 V 173
V
Sbjct: 442 V 442
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LD 67
Y R+ G +++V A+D+D G LV Y ++ N Y + LD
Sbjct: 372 YVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 431
Query: 68 PATEHQGPIQ---DEGG---LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
T + ++ +GG LS+ + V ++V DIND P F S P++ +V E G
Sbjct: 432 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 491
Query: 120 VGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V A DAD G NA + Y V D PF ++ TG I LD E+ Y
Sbjct: 492 VLHVQAIDADAGDNARLEYRLAGVGHDFPFSINNGTGWISVAAELDREEVDFY 544
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------------AASYFNLDPATEHQ-- 73
+G +++ V A D+D+ ++ Y++ NT + LD E Q
Sbjct: 593 VGTSVVTVSAVDRDA--HSVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYV 650
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G TA V + VTD N P FQS Y +V E + G V + ATD D G
Sbjct: 651 LAVTASDGTRQDTAQVVVNVTDANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 710
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + IP F +DA+TG + T LDYE Q Y
Sbjct: 711 ENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSY 749
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 33/181 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPATE---- 71
Y A + G ++ ++A D D G+ G +EY L D+ ++ +F+LDP T
Sbjct: 154 YQATVPENRPAGTSVASLRAIDPDEGEAGRLEYTMDALFDSRSN--HFFSLDPVTGAVTT 211
Query: 72 -------------HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ QD G S+ AT+ I VTD ND +P F+ Y+ S+ E +
Sbjct: 212 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 271
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV-------PEDIPFVVDANTGDIRTNKALDYEKQQL 168
G V V ATD D NA + Y + P ++ F +D +G IRT +D E+ +
Sbjct: 272 VGYEVLTVRATDGDAPPNANILYRLLEGPGAGPSEV-FEIDPRSGVIRTRGPVDREEVES 330
Query: 169 Y 169
Y
Sbjct: 331 Y 331
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLDPATEHQGPIQD- 78
+++QV ATD+DSG G V Y + + LD Q ++
Sbjct: 801 SVLQVSATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAY 860
Query: 79 --EGGLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
+ G+ T V + V D+ND P F+ ++ V E GLAV RV ATD DEG
Sbjct: 861 AVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGT 920
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 921 NAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYEDRPEYI 961
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSSTA 86
G T++ + ATD+D+G+ + Y + D+ F +D A Q + E +S T
Sbjct: 696 GTTVVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTL 751
Query: 87 TVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
+ R V D+ND P+F Y+ SV E +V +V ATD D
Sbjct: 752 AITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQVSATDRD 811
Query: 130 EGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N V+Y+ D F+V++ +G +RT + LD E Y+ R + + K
Sbjct: 812 SGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYAVDK 864
Score = 42.7 bits (99), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 32/163 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G+ + +V ATD D G + Y++++ N F LD + + D
Sbjct: 904 IGLAVARVTATDPDEGTNAQIMYQIVEGNI--PEVFQLDIFSGELTALVDLDYEDRPEYI 961
Query: 79 ------EGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRV 123
L S ATV++R+ D ND P + F S P G A+GRV
Sbjct: 962 LVIQATSAPLVSRATVHVRLLDRNDNPPVLGNFEILFNNYVTNRSSSFPGG----AIGRV 1017
Query: 124 HATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
A D D + + ++ V ++A+TG++R ++ALD +
Sbjct: 1018 PAHDPDISDSLTYSFERGNELSLVLLNASTGELRLSRALDNNR 1060
Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 32/136 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASY-------------FN 65
LG ++ V+A D D+G +EYRL ++N T S F
Sbjct: 488 LGYLVLHVQAIDADAGDNARLEYRLAGVGHDFPFSINNGTGWISVAAELDREEVDFYSFG 547
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
++ A +H P L+++A+V++ + D+ND NP F Y + E G +V V
Sbjct: 548 VE-ARDHGTP-----ALTASASVSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVS 601
Query: 125 ATDADEGQNAVVYYSV 140
A D D ++V+ Y +
Sbjct: 602 AVDRD--AHSVITYQI 615
>gi|390470196|ref|XP_002807360.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16 [Callithrix
jacchus]
Length = 3297
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 82/162 (50%), Gaps = 28/162 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGP- 75
G +++V A D D G G V Y L +F++DP + E Q
Sbjct: 588 GSFVVRVTARDPDQGTNGQVTYSLAPGAH--THWFSIDPTSGIITTAISLDYELEPQPQL 645
Query: 76 --IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ +GGL +S+ATV++ + D+ND P+FQ Y S+PEG Q G +V ATDAD
Sbjct: 646 TVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDAD 705
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEK 165
G ++ YS+ + PF +DA++GD+ T + LD ++
Sbjct: 706 SGPFGLLSYSLGAGLGASGSPPFRIDAHSGDVCTTRTLDRDQ 747
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 79/178 (44%), Gaps = 30/178 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + R+ G +L+ ++ATD D G G V Y + + + F+LDP T
Sbjct: 1653 YSVLLRENSPPGTSLLTLRATDPDLGANGQVTYGGVSSES-----FSLDPDTGVLKTLRA 1707
Query: 71 ---EHQGPI------QDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQDGLA 119
E Q I QD G V IRV D ND P F S VPEGQD
Sbjct: 1708 LDREEQEEINLTVYAQDRGSPPQLTHVTIRVAVEDENDHTPTFGSAHLSLEVPEGQDPQT 1767
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQ---QLYLE 171
+ + A+D D G N + Y + + P FV+D +G+ T + LD E + QL +E
Sbjct: 1768 LTMLRASDPDVGANGQLQYRILDGDPSGAFVLDLTSGEFGTMRPLDREVEPAFQLKIE 1825
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL---------------DPATEHQGPI 76
TL ++A+D D G G ++YR+LD + A +L +PA + +
Sbjct: 1767 TLTMLRASDPDVGANGQLQYRILDGDPSGAFVLDLTSGEFGTMRPLDREVEPAFQLKIEA 1826
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQN 133
+D G LS+T + + V D ND P F Y VPE G + ++ A D D G N
Sbjct: 1827 RDGGQPALSATLLLTVTVLDANDHAPAFSVPAYSVEVPEDVPAGTLLLQLQAHDPDAGAN 1886
Query: 134 AVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSYL 184
V Y + F+++ ++G++RT ALD E+ Y V + A L
Sbjct: 1887 GRVTYYLGAGTAGAFLLEPSSGELRTAAALDREQCSSYTFSVSAVDGAAAGPL 1939
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 21/147 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNT--DAASYFNLDPAT-----------EHQGPI 76
G + + A D D+G FG + Y LL+ + F L+ +T EH
Sbjct: 2721 GTLVTTLHAIDGDAGAFGRLRYSLLEAGPGPEGREAFALNSSTGELRARMPFDYEHTESF 2780
Query: 77 Q------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ D G LS++ TV++ VT ++ +P F + + F VPEG + G ++G V ATD D
Sbjct: 2781 RLLVGAADAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQVPEGARRGHSLGHVQATDED 2840
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDI 155
G + +V YS+ P F ++ TG +
Sbjct: 2841 GGADGLVLYSLATSSPYFGINQTTGAL 2867
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 64/146 (43%), Gaps = 26/146 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY--------------RLLDNNTDAASY 63
FY A + + G +QV ATD DSG FGL+ Y R+ ++ D +
Sbjct: 681 FYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGASGSPPFRIDAHSGDVCTT 740
Query: 64 FNLDPATEHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEG 114
LD QGP D GGL S V + ++D ND P+F Y S+ +
Sbjct: 741 RTLD---RDQGPSSFDFTVTAVDGGGLKSMVYVKVFLSDENDNPPQFYPREYATSLSAQS 797
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV 140
G AV RV A D D+G + + Y +
Sbjct: 798 PPGTAVLRVRAHDPDQGSHGRLSYHI 823
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 28/167 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQ 73
+G L+ V+A+D D G GL+ + + ++ D + F LD ++ HQ
Sbjct: 2616 VGAELLHVEASDADPGPHGLLHFTV--SSGDPSGLFELDESSGTLRLAHALDCETQARHQ 2673
Query: 74 GPIQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
+Q G + A V I V D+ND P F S+ E Q G V +HA D D
Sbjct: 2674 LVVQAADPAGAHFALAPVTIEVQDVNDHGPAFPLNLLSTSLAENQPPGTLVTTLHAIDGD 2733
Query: 130 EGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYEKQQLY 169
G + YS+ E P F ++++TG++R DYE + +
Sbjct: 2734 AGAFGRLRYSLLEAGPGPEGREAFALNSSTGELRARMPFDYEHTESF 2780
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A +++ + DIND P F Y V E G V +V A+DAD G N V Y +
Sbjct: 338 ALLDVTLLDINDHAPAFNQSRYHAVVSESLAPGSPVLQVFASDADAGANGAVTYEINRRQ 397
Query: 143 ---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D PF +DA+TG +R + LD+E+++++
Sbjct: 398 SEGDGPFSIDAHTGLLRLERPLDFEQRRVH 427
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 73/167 (43%), Gaps = 32/167 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQ----- 73
G ++QV+A D G + Y L A+S F L+P + E Q
Sbjct: 1115 GTQVLQVQAQAPDGGP---ITYHLAAEG--ASSPFGLEPQSGWLWVRAALDREAQELYTL 1169
Query: 74 ------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
G + G + TATV + + + N+ +P P +V E Q G +VGRV AT
Sbjct: 1170 KVMAVSGSKAELGQQTGTATVRVSILNQNEHSPRLSEDPTFLAVAENQPPGTSVGRVFAT 1229
Query: 127 DADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
D D G N + YS+ + F + TG++ T + LD E+Q Y
Sbjct: 1230 DRDSGPNGRLTYSLQQLSEDSKAFRIHPQTGELTTLQTLDREQQSSY 1276
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 66/158 (41%), Gaps = 30/158 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQDE------- 79
G L+Q++A D D+G G V Y L A F L+P++ + E
Sbjct: 1870 GTLLLQLQAHDPDAGANGRVTYYL---GAGTAGAFLLEPSSGELRTAAALDREQCSSYTF 1926
Query: 80 ----------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-----GQDGLAVGRVH 124
G LS+T +V I V D+ND P F + P +P L + +
Sbjct: 1927 SVSAVDGAAAGPLSTTVSVTIMVRDVNDHAPTFPTSPLRLRMPRPGPSFSTPTLPLATLR 1986
Query: 125 ATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKA 160
A D D G NA + Y + P VD+ TG+IR ++
Sbjct: 1987 AEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARS 2024
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
A++H P + S+T + + V D+ND+ P FQ Y + E G ++ + ATD
Sbjct: 1620 ASDHGSPPR-----SATQVLTVSVADVNDEAPTFQQQEYSVLLRENSPPGTSLLTLRATD 1674
Query: 128 ADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQ 167
D G N V Y F +D +TG ++T +ALD E+Q+
Sbjct: 1675 PDLGANGQVTYGGVSSESFSLDPDTGVLKTLRALDREEQE 1714
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 75/168 (44%), Gaps = 32/168 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG------PI------- 76
G +++V+A D D G G + Y +L N+ A F LD E G P+
Sbjct: 800 GTAVLRVRAHDPDQGSHGRLSYHILAGNSPA--LFALD---EQSGLLTVAWPLARRANSV 854
Query: 77 -------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHAT 126
QD GGL + +A VNI + P F+ L Y FSVPE G +VG V A
Sbjct: 855 VQLEIGAQDGGGLQAEPSAQVNISIVPGTPTPPIFEQLQYVFSVPEDVAPGTSVGIVQAH 914
Query: 127 DADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
+ G+ A V ++ P F +DA +G ++T LD E LE
Sbjct: 915 NP-PGRLAPVTLALSGGDPRGLFSLDAVSGLLQTLCPLDRELLGPVLE 961
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 68/161 (42%), Gaps = 29/161 (18%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
L+QV+A D D G G + Y L + A F++DPAT I
Sbjct: 2189 LLQVEADDLDQGSGGQISYSLAASQP-AHGLFHVDPATGIITTIAILDREIWAETRLVLI 2247
Query: 78 --DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQ 132
D G L +AT+ + V D ND P P+E V E G + +V D D G
Sbjct: 2248 ATDRGSPALVGSATLTVMVIDTNDNRPTIPQ-PWELRVSEDALLGSEIAQVTGNDVDSG- 2305
Query: 133 NAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V++Y++ P+D PF V G + LD+E+ Y
Sbjct: 2306 -PVLWYALSPSGPQD-PFSVGRYGGRVSLTGPLDFEQCDRY 2344
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 68/172 (39%), Gaps = 29/172 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGPIQDEGGLSSTA 86
G + ++A D DSG V + LL A F +DP T H P+ GG +
Sbjct: 1009 GTPIYTLRALDPDSGVNSRVTFTLLAGGGGA---FTVDPTTGHVRLMRPLGPSGGPAHEL 1065
Query: 87 TVNIR----------------VTDINDKN--PEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
+ R V D+ + P F S Y +P G G V +V A
Sbjct: 1066 ELEARDGGSPPRISHFRLRVVVQDVGTRGLAPRFDSPTYRVDLPSGTIPGTQVLQVQAQA 1125
Query: 128 ADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D G + Y+ E PF ++ +G + ALD E Q+LY +V +S
Sbjct: 1126 PDGG--PITYHLAAEGASSPFGLEPQSGWLWVRAALDREAQELYTLKVMAVS 1175
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 64/140 (45%), Gaps = 33/140 (23%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G ++ +V ATD+DSG G + Y L + D+ + F + P T E Q
Sbjct: 1220 GTSVGRVFATDRDSGPNGRLTYSLQQLSEDSKA-FRIHPQTGELTTLQTLDREQQSSYQL 1278
Query: 76 ---IQDEGG--LSSTATVNIRVTDINDKNPEF--------QSLPYEF--SVPEGQDGLAV 120
+QD G S+T TV++ V D+ND +P F LP + VP G V
Sbjct: 1279 LVQVQDGGSPSRSTTGTVHVAVLDLNDNSPTFLQASGAAGGGLPIQVPDRVPPGT---LV 1335
Query: 121 GRVHATDADEGQNAVVYYSV 140
+ A D DEG+N + Y++
Sbjct: 1336 TTLQAKDPDEGENGTILYTL 1355
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 65/147 (44%), Gaps = 28/147 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------- 68
Y M + G ++ V ATD+DSG G + Y L A F++DP
Sbjct: 2379 LYQVMLLENTPPGSAILSVSATDRDSGANGHISYHL----ASPADGFSVDPNNGTLFTIV 2434
Query: 69 ---ATEHQGP--------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG- 114
A H+G +D G G ++ ATV++++ D ND P F Y +V E
Sbjct: 2435 ETVALGHEGSGAVDVVLEARDHGAPGRAARATVHVQLQDQNDHAPSFTLPHYRVAVTEDL 2494
Query: 115 QDGLAVGRVHATDADEGQ-NAVVYYSV 140
G + + ATDAD + +A V YS+
Sbjct: 2495 PPGSTLLTLEATDADGSRTHAAVDYSI 2521
Score = 42.7 bits (99), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 73/178 (41%), Gaps = 40/178 (22%)
Query: 30 GVTLMQVKATDKDSGK-FGLVEYRLLDNNTDAASYFNLDP----ATEHQGPIQDEGGL-- 82
G TL+ ++ATD D + V+Y ++ N F L+P A E GP G
Sbjct: 2497 GSTLLTLEATDADGSRTHAAVDYSIISGNR--GQVFQLEPRLAEAGEGAGPGPRALGCLV 2554
Query: 83 ---------------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
SS V + V D+ND P F Y +VPE
Sbjct: 2555 LLESLDFESLTQYNLTVAAADRGQPPRSSVVPVTVTVLDVNDNPPVFTRASYRVAVPEDT 2614
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
G + V A+DAD G + +++++V P F +D ++G +R ALD E Q +
Sbjct: 2615 PVGAELLHVEASDADPGPHGLLHFTVSSGDPSGLFELDESSGTLRLAHALDCETQARH 2672
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 15/93 (16%)
Query: 82 LSSTATVNIRVTDINDKNPEF-------QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
L + A + VTD+ND P F + LP E ++P G V RV A D D+G N
Sbjct: 551 LRAEAAFVLHVTDVNDNAPAFDRQLYRPEPLP-EVALP----GSFVVRVTARDPDQGTNG 605
Query: 135 VVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
V YS+ F +D +G I T +LDYE
Sbjct: 606 QVTYSLAPGAHTHWFSIDPTSGIITTAISLDYE 638
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD-EGQNAVVYYSVPEDIP 145
V +RV D N+ P F P ++PE + G A+ ATDAD G N+ V Y + P
Sbjct: 1511 VQVRVQDENEHAPTFARDPLALALPENPEPGAALYTFRATDADGPGPNSDVRYRLLRQEP 1570
Query: 146 FV----VDANTGDIRTNKALD 162
V +DA TG + + LD
Sbjct: 1571 PVPALRLDARTGALSAPRGLD 1591
Score = 36.2 bits (82), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 75/185 (40%), Gaps = 38/185 (20%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI---- 76
AM R+ G ++ +A G G + Y +L N F++ P+T G I
Sbjct: 2074 AMIRENAPPGTLIVSPRAVHA-GGSNGPITYSILSGNEKGT--FSIQPST---GAITVRS 2127
Query: 77 -----------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ--DG 117
+ GG + + + + + D ND P F Y +PE + +G
Sbjct: 2128 AEGLDFEVSPRLRLVLQAESGGAFAFSVLTLTLQDANDNAPRFLRPHYVAFLPESRPFEG 2187
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLYLE-R 172
+ +V A D D+G + YS+ P F VD TG I T LD E ++ E R
Sbjct: 2188 PLL-QVEADDLDQGSGGQISYSLAASQPAHGLFHVDPATGIITTIAILDRE---IWAETR 2243
Query: 173 VFLIS 177
+ LI+
Sbjct: 2244 LVLIA 2248
>gi|348558978|ref|XP_003465293.1| PREDICTED: protocadherin-16-like [Cavia porcellus]
Length = 3297
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 82/162 (50%), Gaps = 28/162 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGPI 76
G +++V A D D G G V Y L +F++DP + E Q +
Sbjct: 488 GSFVVRVTARDPDQGTNGQVTYSLAPGTH--TRWFSIDPTSGIITTAASLDYELEPQPQV 545
Query: 77 ---QDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+GGL +S+ATV++ + D+ND P+FQ Y S+PEG Q G +V ATDAD
Sbjct: 546 IVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDAD 605
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEK 165
G ++ YS+ + PF +DA++GD+ T + LD ++
Sbjct: 606 SGPFGLLSYSLGAGLGASGPPPFRIDAHSGDVCTTRILDRDQ 647
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 21/145 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNT--DAASYFNLDPAT-----------EHQGPI 76
G + + A D D+G FG + Y LL+ + F L+ +T EH G
Sbjct: 2721 GTLVTTLHAIDGDAGAFGRLHYSLLEAGPGPEGREAFALNSSTGELRARVPFDYEHTGSF 2780
Query: 77 Q------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ D G LS++ TV++ VT ++ +P F + + F VPEG Q G +VG V ATD D
Sbjct: 2781 RLLVGAADAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQVPEGAQRGHSVGHVQATDED 2840
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTG 153
G + +V YS+ P F ++ TG
Sbjct: 2841 GGADGLVLYSLATSSPYFGINQTTG 2865
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 79/177 (44%), Gaps = 27/177 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + R+ G +L+ ++ATD D G G V Y + F+LDP T
Sbjct: 1653 YSVLLRENSPPGTSLLTLRATDPDLGANGQVTYGGISGEN-----FSLDPNTGVLTTLRA 1707
Query: 71 ---EHQGPI------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
E Q I +D G L + TV + + D ND P F + VPEGQD
Sbjct: 1708 LDREEQEEINLTVYARDRGSPPLLTHVTVRVAIEDENDHAPAFGNAQLSLEVPEGQDPQT 1767
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ + A+D D G N + Y + + P FV+D ++G+ T + LD E + + R+
Sbjct: 1768 LTILRASDPDVGANGQLQYRIVDGDPSGAFVLDLDSGEFGTMRPLDREVEPAFQLRI 1824
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 74/160 (46%), Gaps = 24/160 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDA---ASYFNLDPATEHQGP 75
+G L+ V+A+D D G GLV + L LD N+ A A + + T HQ
Sbjct: 2616 VGAELLHVEASDADPGPHGLVRFTLSSGDPLGLFELDENSGALRLAQSLDCETQTRHQLV 2675
Query: 76 IQ--DEGGLS-STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEG 131
+Q D G + A V + V D+ND P F S+ E Q G V +HA D D G
Sbjct: 2676 VQAADPAGTHFALAPVTVEVQDVNDHGPAFPLNILSTSLAENQPPGTLVTTLHAIDGDAG 2735
Query: 132 QNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYE 164
++YS+ E P F ++++TG++R DYE
Sbjct: 2736 AFGRLHYSLLEAGPGPEGREAFALNSSTGELRARVPFDYE 2775
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 76/173 (43%), Gaps = 20/173 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD---------------PATEHQGPI 76
TL ++A+D D G G ++YR++D + A +LD PA + +
Sbjct: 1767 TLTILRASDPDVGANGQLQYRIVDGDPSGAFVLDLDSGEFGTMRPLDREVEPAFQLRIEA 1826
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQN 133
+D G LS+T V + V D ND P F Y VPE G + ++ A D D G N
Sbjct: 1827 RDGGQPALSATLLVTVTVLDANDHAPAFPVPAYSVEVPEDAPAGTLLIQLQAHDPDAGAN 1886
Query: 134 AVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSYL 184
V Y + F+++ +G++RT ALD E Y V + A L
Sbjct: 1887 GHVTYYLGAGTAGTFLLEPTSGELRTATALDREHCSSYAFSVSAVDGAAAGPL 1939
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 64/146 (43%), Gaps = 26/146 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY--------------RLLDNNTDAASY 63
FY A + + G +QV ATD DSG FGL+ Y R+ ++ D +
Sbjct: 581 FYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGASGPPPFRIDAHSGDVCTT 640
Query: 64 FNLDPATEHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEG 114
LD QGP D GGL S V + V+D ND P+F Y S+ +
Sbjct: 641 RILD---RDQGPSSFDFTVTAVDGGGLKSMVYVKVFVSDENDNPPQFYPREYAASLSAQS 697
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV 140
G AV RV A D D+G + + Y +
Sbjct: 698 TPGTAVLRVRAHDPDQGPHGRLSYHI 723
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY 138
G +STATV + + + ND +P P +V E Q G +VGRV ATD D G N + Y
Sbjct: 1082 GQQTSTATVRVSILNQNDHSPRLSEEPTFLAVTENQPPGTSVGRVFATDRDSGPNGRLTY 1141
Query: 139 SVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
S+ + F + TG++ T + LD E+Q +
Sbjct: 1142 SLRQLSEDSKAFRIHPQTGEVTTLQTLDREQQSSF 1176
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 72/175 (41%), Gaps = 40/175 (22%)
Query: 30 GVTLMQVKATDKDSGK-FGLVEYRLLDNNTDAASYFNLDP----ATEHQGPIQDEGGL-- 82
G TL+ ++ATD D + V+Y ++ N F L+P A E GP G
Sbjct: 2497 GSTLLTLEATDADGSRTHATVDYTIISGNR--GRVFQLEPRLAEAGEGVGPGPQALGCLV 2554
Query: 83 ---------------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
SS V + V D+ND P F Y +VPE
Sbjct: 2555 LLEPLDFESLTQYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTQASYRVTVPEDM 2614
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQ 166
G + V A+DAD G + +V +++ P F +D N+G +R ++LD E Q
Sbjct: 2615 PVGAELLHVEASDADPGPHGLVRFTLSSGDPLGLFELDENSGALRLAQSLDCETQ 2669
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 65/158 (41%), Gaps = 30/158 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G L+Q++A D D+G G V Y L A F L+P + EH
Sbjct: 1870 GTLLIQLQAHDPDAGANGHVTYYL---GAGTAGTFLLEPTSGELRTATALDREHCSSYAF 1926
Query: 78 --------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-----GQDGLAVGRVH 124
G LS+T V I V D+ND P F + P +P LA+ +
Sbjct: 1927 SVSAVDGAAAGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGPSLSTPTLALATLR 1986
Query: 125 ATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKA 160
A D D G NA + Y + P VD+ TG+IR ++
Sbjct: 1987 AEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARS 2024
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 71/160 (44%), Gaps = 27/160 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYFN-LDP----------- 68
G + + A D D G+ V YRL L ++T A S LD
Sbjct: 1560 GPVALHLVARDPDLGEAARVSYRLASGGDGHFRLHSSTGALSVVRPLDREQRAEHVLTVV 1619
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
A++H P + SST + + + D+ND+ P FQ Y + E G ++ + ATD
Sbjct: 1620 ASDHGSPPR-----SSTQLLTVSIVDVNDEAPTFQQQEYSVLLRENSPPGTSLLTLRATD 1674
Query: 128 ADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQ 167
D G N V Y F +D NTG + T +ALD E+Q+
Sbjct: 1675 PDLGANGQVTYGGISGENFSLDPNTGVLTTLRALDREEQE 1714
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 79/179 (44%), Gaps = 32/179 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG---- 74
Y A + G +++V+A D D G G + Y +L N+ F LD EH G
Sbjct: 689 YAASLSAQSTPGTAVLRVRAHDPDQGPHGRLSYHILAGNS--PPLFALD---EHSGLLTV 743
Query: 75 --PI--------------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ QD GGL + +A VNI + + P F+ L Y FSVPE
Sbjct: 744 AWPLARRANSVVQLEIGAQDGGGLKAEPSARVNISIVPGSPTPPIFEQLQYVFSVPEDVA 803
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
G +VG V A + G+ V ++ P F +D+ +G ++T + LD E LE
Sbjct: 804 PGTSVGMVQAHNP-PGRLGPVTLALSGGDPRGLFSLDSASGLLQTLRPLDRELLGPVLE 861
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 35/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G ++ +V ATD+DSG G + Y L + D+ + F + P T E Q Q
Sbjct: 1120 GTSVGRVFATDRDSGPNGRLTYSLRQLSEDSKA-FRIHPQTGEVTTLQTLDREQQSSFQL 1178
Query: 78 ----DEGG---LSSTATVNIRVTDINDKNPEF--------QSLPYEF--SVPEGQDGLAV 120
+GG S+T TV+I V D+ND +P F LP + VP G V
Sbjct: 1179 LVQVQDGGSPPRSTTGTVHIAVLDLNDNSPTFLQASGAAGGGLPIQVPDRVPPGT---LV 1235
Query: 121 GRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ A D DEG+N + Y++ P F + ++G++ T +L ++ Y+
Sbjct: 1236 TTLQAKDPDEGENGTILYTLTGPGSELFSLHPHSGELLTAASLIRAERPHYV 1287
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 28/147 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------- 68
Y M + G ++ V ATD+DSG G + Y L A F++DP
Sbjct: 2379 LYQVMLLEHTPPGSAILSVSATDRDSGANGHISYYL----ASPAEGFSVDPNNGTLFTTV 2434
Query: 69 ---ATEHQGP--------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG- 114
H+GP +D G G ++ ATV++++ D ND P F Y +V E
Sbjct: 2435 GTVGFGHEGPGVVDVVLEARDHGAPGRAARATVHVQLQDQNDHTPSFTLPHYRVAVSEDL 2494
Query: 115 QDGLAVGRVHATDADEGQ-NAVVYYSV 140
G + + ATDAD + +A V Y++
Sbjct: 2495 PPGSTLLTLEATDADGSRTHATVDYTI 2521
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 72/178 (40%), Gaps = 35/178 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-- 76
Y A + L L+QV+A D D G G + Y L + A F++DP+T G I
Sbjct: 2175 YVAFLPESRPLEGPLLQVEADDLDQGSGGQISYSLAASQL-ARGLFHVDPST---GTITT 2230
Query: 77 ------------------QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
D G L +AT+ + V D ND P P+E V E
Sbjct: 2231 TAILDREIWAETRLVLMATDRGSPSLVGSATLTVMVIDTNDNRPTIPQ-PWELRVSEDAL 2289
Query: 116 DGLAVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + +V D D G V++Y S P+D PF + G + LD+E+ Y
Sbjct: 2290 LGSEIAQVTGNDVDSG--PVLWYVLSPSGPQD-PFSIGRYGGRVSLMGPLDFEQCDHY 2344
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 15/93 (16%)
Query: 82 LSSTATVNIRVTDINDKNPEF-------QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
L + A + +TD+ND P F + LP E ++P G V RV A D D+G N
Sbjct: 451 LRAEAAFVLHITDVNDNAPTFDRQLYRPEPLP-EVALP----GSFVVRVTARDPDQGTNG 505
Query: 135 VVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
V YS+ F +D +G I T +LDYE
Sbjct: 506 QVTYSLAPGTHTRWFSIDPTSGIITTAASLDYE 538
Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD-EGQNAVVYYSVPEDIP 145
V +RV D N+ P F P ++PE + G+A+ A+DAD G N+ V Y + P
Sbjct: 1421 VQVRVQDENEHAPTFARDPLALALPENPEPGIALYTFRASDADGPGPNSDVRYRLLRQEP 1480
Query: 146 FV----VDANTGDIRTNKALDYEKQQLYL 170
V +DA TG + + LD E L
Sbjct: 1481 PVPALRLDARTGALSAPRGLDRETTPALL 1509
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 9/100 (9%)
Query: 79 EGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNA 134
+GGL + A +++ + DIND P F Y V E G V +V A DAD G N
Sbjct: 228 DGGLPPRRAQALLDVTLLDINDHAPAFNQSRYHAVVSESLAPGSPVLQVFAADADAGANG 287
Query: 135 VVYYSVPE-----DIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y + D PF +DA+TG +R + LD+E+++++
Sbjct: 288 AVTYEINRRQSEGDGPFSIDAHTGLLRLERPLDFEQRRVH 327
>gi|432856494|ref|XP_004068445.1| PREDICTED: cadherin-24-like [Oryzias latipes]
Length = 1035
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 85/179 (47%), Gaps = 29/179 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A+ + +G +++QV A D D +G RL+ T YF++DP T
Sbjct: 123 YVAVVPEMANIGTSIIQVTALDADDPTYG-NSARLVYGITQGQEYFSVDPQTGILRTAVP 181
Query: 71 EHQGPIQDE--------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
+ Q+E GGLS T TV ++++D+ND P F+ + FSV E
Sbjct: 182 DMDRETQEEYLVVLQAKDMGGHVGGLSGTTTVTVKLSDVNDNPPHFRRSAWTFSVSELAA 241
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGD--IRTNKALDYEKQQLY 169
G+ VGR+ ATD D G+NA + +++ E F V + I NK LDYE + Y
Sbjct: 242 PGVEVGRLTATDPDLGENAQLEFAILDAEEAETFNVTGRDKEAVIVLNKLLDYETRSSY 300
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 61/127 (48%), Gaps = 22/127 (17%)
Query: 50 EYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF 109
+YRL+ TD S L+P++E IRV DIND P F PY
Sbjct: 82 QYRLIATATDRKSGRALEPSSE----------------FIIRVQDINDNPPVFPHEPYVA 125
Query: 110 SVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP-FVVDANTGDIRTNKA-LDY 163
VPE + G ++ +V A DAD+ G +A + Y + + F VD TG +RT +D
Sbjct: 126 VVPEMANIGTSIIQVTALDADDPTYGNSARLVYGITQGQEYFSVDPQTGILRTAVPDMDR 185
Query: 164 EKQQLYL 170
E Q+ YL
Sbjct: 186 ETQEEYL 192
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 38/174 (21%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN---------------LDPAT---- 70
GV + ++ ATD D G+ +E+ +LD + A FN LD T
Sbjct: 243 GVEVGRLTATDPDLGENAQLEFAILD--AEEAETFNVTGRDKEAVIVLNKLLDYETRSSY 300
Query: 71 ----EHQGPIQD-----EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-AV 120
E P+ D +G ATV + V + D+ P+F Y V E + +V
Sbjct: 301 TFSVEVTNPVVDARFIRKGPFKDQATVRVMVLNA-DEPPKFSQAYYHLDVSENCPPVCSV 359
Query: 121 GRVHATDADEGQNAVVYYSV-----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
GRV+A D D GQ+ V YS+ PE + F + ++TG I T LD E++Q +
Sbjct: 360 GRVYAIDPDTGQSTNVRYSIDPGSDPEAL-FRIASDTGLISTVMELDREQEQWH 412
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 113 EGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
G + + +GR+H TD D G Y E + FV+D+NTG+I K+LD E++ Y
Sbjct: 26 RGPEPVLIGRLH-TDMDRGDGNTKYTLEGEGVGSVFVIDSNTGNIHVTKSLDREEKDQY 83
>gi|345308131|ref|XP_001508795.2| PREDICTED: cadherin-9 isoform 1 [Ornithorhynchus anatinus]
Length = 790
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 84/184 (45%), Gaps = 37/184 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + +G +++QV ATD D +G + Y +L YF++DP +
Sbjct: 165 YTASVPEMSAVGTSVIQVLATDADDANYGNSAKIVYSILQ----GQPYFSVDPDSGIIKT 220
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++Q IQ + GGLS T TVNI +TD+ND P F Y+F E
Sbjct: 221 ALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFRCLE 280
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYSVPED-----IPFVVDANT--GDIRTNKALDYEK 165
G ++GR+ A D D G NA + Y V E + D +T G + K LD+E
Sbjct: 281 SVPLGTSLGRIKANDPDLGSNAEMAYGVTEGDGADLFEIITDKDTQEGILTVKKQLDFEN 340
Query: 166 QQLY 169
+ LY
Sbjct: 341 KMLY 344
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE G +V +V ATDAD+ G +A + YS+ + P
Sbjct: 148 IKIHDINDNEPKFGQDVYTASVPEMSAVGTSVIQVLATDADDANYGNSAKIVYSILQGQP 207
Query: 146 -FVVDANTGDIRT 157
F VD ++G I+T
Sbjct: 208 YFSVDPDSGIIKT 220
Score = 42.4 bits (98), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 53/105 (50%), Gaps = 13/105 (12%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+LDP H GP +D TA V I V DI D+ P F + Y V E ++G +G+V
Sbjct: 354 HLDPRFYHLGPFKD------TALVKIFVDDI-DEPPVFSNNSYLLEVHEDAKEGSIIGQV 406
Query: 124 HATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYE 164
A D D +N ++ YSV D F + + G I T K+LD E
Sbjct: 407 TARDPDAIKN-LIKYSVDRHSDMDRMFNIHSGNGSIFTLKSLDRE 450
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G + Y + FV+D NTGDI K LD E++ LY+
Sbjct: 69 GTDSQYVGKLH-TDQDKGDGNLKYILTGDGAGSLFVIDENTGDIHAAKKLDREEKALYVL 127
Query: 172 RVFLISK 178
R I +
Sbjct: 128 RAKAIDR 134
>gi|297460978|ref|XP_002701391.1| PREDICTED: protocadherin-16 [Bos taurus]
Length = 3296
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 28/162 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGP- 75
G + +V A D D G G V Y L +F++DP + E Q
Sbjct: 487 GSFVARVTARDPDQGTNGQVTYSLAPGAH--TRWFSIDPTSGIVTTAALLDYELEPQPQL 544
Query: 76 --IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ +GGL SS+ATV++ + D+ND P+FQ Y S+PEG Q G +V ATDAD
Sbjct: 545 IVVATDGGLPPLSSSATVSVVLQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDAD 604
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEK 165
G ++ YS+ + PF +DA++GD+ T + LD ++
Sbjct: 605 SGPFGLLSYSLGAGLGTSGSPPFRIDAHSGDVCTTRTLDRDQ 646
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 22/161 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT--DAASYFNLDPAT--- 70
SL ++A ++ G + + A D D+G FG + Y LL+ + F L+ +T
Sbjct: 2707 SLLSTSLAENQPP-GTLVTTLHAIDGDAGAFGRLHYSLLEAGPGPEGREAFALNSSTGEL 2765
Query: 71 --------EHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
EH G Q D G LS++ TV++ VT ++ +P F + + F VPEG +
Sbjct: 2766 RARVAFDYEHTGSFQLLVGATDAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQVPEGAR 2825
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDI 155
G ++G V ATD D G + +V YS+ P F ++ TG +
Sbjct: 2826 RGHSLGHVQATDEDGGADGLVLYSLAASSPYFGINQTTGAL 2866
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 30/178 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + R+ G +L+ ++ATD D G G V Y + F+LDP T
Sbjct: 1652 YSVLLRENSPPGTSLLTLQATDPDLGANGQVTYGGISGEN-----FSLDPDTGVLTTLRA 1706
Query: 71 ---EHQGPIQ-----DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
E Q I +GG L + TV + V D ND P F S VPEGQD
Sbjct: 1707 LDREEQEEINLTVYARDGGSPPLLTHVTVRVAVEDENDHAPTFGSAHLSLEVPEGQDPQT 1766
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQ---QLYLE 171
+ + A+D D G N + Y + + P FV+D +G+ T + LD E + QL +E
Sbjct: 1767 LTTLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQLQIE 1824
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 75/162 (46%), Gaps = 28/162 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQ 73
+G L+ V+A+D D G GLV + L ++ D F LD ++ HQ
Sbjct: 2615 VGAELLHVEASDADPGPHGLVRFTL--SSGDPLGLFELDESSGDLRLARPLDCETQARHQ 2672
Query: 74 GPIQ--DEGGLS-STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
+Q D G+ + A V I V D+ND P F S+ E Q G V +HA D D
Sbjct: 2673 LVVQASDPAGVHFALAPVTIEVQDVNDHGPAFPLSLLSTSLAENQPPGTLVTTLHAIDGD 2732
Query: 130 EGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYE 164
G ++YS+ E P F ++++TG++R A DYE
Sbjct: 2733 AGAFGRLHYSLLEAGPGPEGREAFALNSSTGELRARVAFDYE 2774
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 20/158 (12%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL---------------DPATEHQGPI 76
TL ++A+D D G G ++YR+LD + A +L +PA + Q
Sbjct: 1766 TLTTLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQLQIEA 1825
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQN 133
+D G LS+T V + V D ND P F Y VPE G + ++ A D D G N
Sbjct: 1826 RDGGQPALSATLLVTVTVLDANDHAPAFPVPSYSVEVPEDAPAGTLLLQLQAHDPDAGAN 1885
Query: 134 AVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
V Y + F+++ ++G++RT LD E+ Y
Sbjct: 1886 GRVTYYLGTGAAGAFLLEPSSGELRTATTLDREQCPSY 1923
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 63/143 (44%), Gaps = 20/143 (13%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-NTDAASYFNLDPAT------ 70
FY A + + G +QV ATD DSG FGL+ Y L T + F +D +
Sbjct: 580 FYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGTSGSPPFRIDAHSGDVCTT 639
Query: 71 ----EHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDG 117
QGP D GGL S V + V+D ND P+F Y S+ + G
Sbjct: 640 RTLDRDQGPSSFDFTVTAVDGGGLKSMVYVKVFVSDENDNPPQFYPREYAASLSAQSAPG 699
Query: 118 LAVGRVHATDADEGQNAVVYYSV 140
AV RV A D D+G + + Y +
Sbjct: 700 TAVLRVRAHDPDQGPHGRLSYHI 722
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 68/158 (43%), Gaps = 30/158 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPI--- 76
G L+Q++A D D+G G V Y L T AA F L+P++ Q P
Sbjct: 1869 GTLLLQLQAHDPDAGANGRVTYYL---GTGAAGAFLLEPSSGELRTATTLDREQCPSYAF 1925
Query: 77 -------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-----GQDGLAVGRVH 124
G LS+T V I V D+ND P F + P +P L + +
Sbjct: 1926 TVNAVDSAAAGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGPVFSTPILPLATLR 1985
Query: 125 ATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKA 160
A D D G NA + Y + P VD+ TG+IR +++
Sbjct: 1986 AEDRDTGANASILYRLAGTPPPGTTVDSYTGEIRVSRS 2023
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A +++ + DIND P F Y +V E G V +V+A+DAD G N V Y +
Sbjct: 237 ALLDVTLLDINDHAPAFNQSRYHAAVSESLAPGSPVLQVYASDADAGANGAVTYEINRRQ 296
Query: 143 ---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D PF +DA+TG +R + LD+E+++++
Sbjct: 297 SEGDGPFSIDAHTGLLRLERPLDFEQRRVH 326
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY 138
G ++TATV I + + ND +P P +V E Q G +VGRV ATD D G N + Y
Sbjct: 1081 GQQTATATVRISILNQNDHSPRLSEEPTFLAVAENQPPGTSVGRVFATDRDSGINGRLTY 1140
Query: 139 SVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
S+ + F + TG++ T + LD E+Q Y
Sbjct: 1141 SLRQLSEDSKAFRIHPQTGEVTTLQTLDRERQNSY 1175
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 70/163 (42%), Gaps = 23/163 (14%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------- 77
+ H G T + V A D D G+ V YRL A F L P+T ++
Sbjct: 1554 EDHPPGPTALHVVARDPDLGEAARVSYRL---AAGADGCFRLHPSTGALSVVRSLDREQR 1610
Query: 78 ----------DEGGLSSTAT--VNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVH 124
D G +AT + + V D+ND+ P FQ Y + E G ++ +
Sbjct: 1611 AEYVLTVVASDHGSPPRSATQLLTVSVADVNDEAPAFQQQEYSVLLRENSPPGTSLLTLQ 1670
Query: 125 ATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQ 167
ATD D G N V Y F +D +TG + T +ALD E+Q+
Sbjct: 1671 ATDPDLGANGQVTYGGISGENFSLDPDTGVLTTLRALDREEQE 1713
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
SS V + V D+ND P F Y +VPE G + V A+DAD G + +V +++
Sbjct: 2581 SSAVPVTVSVLDVNDNPPVFTRAAYRVAVPEDTPVGAELLHVEASDADPGPHGLVRFTLS 2640
Query: 142 EDIP---FVVDANTGDIRTNKALDYEKQQLY 169
P F +D ++GD+R + LD E Q +
Sbjct: 2641 SGDPLGLFELDESSGDLRLARPLDCETQARH 2671
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 33/171 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G ++ +V ATD+DSG G + Y L + D+ + F + P T E Q
Sbjct: 1119 GTSVGRVFATDRDSGINGRLTYSLRQLSEDSKA-FRIHPQTGEVTTLQTLDRERQNSYQL 1177
Query: 76 ---IQDEGG--LSSTATVNIRVTDINDKNPEF--------QSLPYEFSVPEG-QDGLAVG 121
+QD G S+T TV+I V D+ND +P F LP + VP+G G V
Sbjct: 1178 LVQVQDAGSPPRSTTGTVHIAVLDLNDNSPTFLQASGAAGGGLPIQ--VPDGVPPGTLVT 1235
Query: 122 RVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ A D DEG+N + Y + P F + ++G++ T L ++ Y+
Sbjct: 1236 TLQAKDPDEGENGTILYMLTGPGSELFSLHPHSGELLTAAPLIRAERPHYV 1286
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 76/179 (42%), Gaps = 32/179 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG---- 74
Y A + G +++V+A D D G G + Y +L N+ F LD EH G
Sbjct: 688 YAASLSAQSAPGTAVLRVRAHDPDQGPHGRLSYHILAGNS--PPLFALD---EHSGLLTV 742
Query: 75 --PI--------------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D GGL + A VNI + P F+ L Y FSVPE
Sbjct: 743 AWPLARRASSMVQLEIGARDGGGLQAEPNARVNISIVPGTPVPPVFEQLQYVFSVPEDVA 802
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
G +VG V A + G+ V ++ P F +D TG ++T + LD E LE
Sbjct: 803 PGTSVGVVQAHNP-PGRLGPVTLALSGGDPRGLFSLDGATGLLQTLRPLDRELLGPVLE 860
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 66/147 (44%), Gaps = 28/147 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------- 68
Y M + G ++ V ATD+DSG G V Y L +A F++DP
Sbjct: 2378 LYQVMLLEHTPPGSAILSVSATDRDSGANGHVSYHL----ASSAEGFSIDPNNGTLFTTV 2433
Query: 69 ---ATEHQGP--------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG- 114
A H+GP +D G ++ ATV++++ D ND P F Y +V E
Sbjct: 2434 GTVALGHEGPGMVDVVLEARDHGVPVRAARATVHVQLQDQNDHAPSFTLPHYRVAVTEDL 2493
Query: 115 QDGLAVGRVHATDADEGQ-NAVVYYSV 140
G + + ATDAD + +A V YS+
Sbjct: 2494 PPGSTLLTLEATDADGSRSHAAVDYSI 2520
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 71/180 (39%), Gaps = 39/180 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + L L+QV+A D D G G + Y L + A F++DP
Sbjct: 2174 YVAFLPESRPLEGPLLQVEADDLDQGPSGQISYSLAASQP-ARGLFHVDPATGTITTTAI 2232
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
AT+ P L +AT+ + V D ND P P+E V E
Sbjct: 2233 LDREIWAETRLVLMATDRGSP-----ALVGSATLTVMVIDTNDNRPTIPQ-PWELRVSED 2286
Query: 114 GQDGLAVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + +V D D G V++Y S P+D PF V G + LD+E++ Y
Sbjct: 2287 ALLGSEIAQVTGNDVDSG--PVLWYVLSPSGPQD-PFSVGRYGGRLSLTGPLDFEQRDRY 2343
Score = 42.4 bits (98), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 69/173 (39%), Gaps = 31/173 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH----------------- 72
G + ++A D DSG V + LL F +DP T H
Sbjct: 908 GTLIYTLRALDPDSGVNSRVTFTLLAGG---GGTFTVDPTTGHIRLMGPLGPPGGPAHEL 964
Query: 73 QGPIQDEGGLSSTATVNIRVT--DINDKN--PEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
+ +D G T+ +RV D+ + P F S Y +P G G V +V A
Sbjct: 965 ELEARDGGSPPRTSHFRLRVVVQDLGTRGLAPHFDSPTYRVDLPSGTTPGTQVLQVQARA 1024
Query: 128 ADEGQNAVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D + V Y + D PF ++ +G + ALD+E Q+LY +V +S
Sbjct: 1025 PD---GSPVTYHLAADGPGSPFGLEPQSGWLWVRAALDHEAQELYTLKVMAVS 1074
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 44/93 (47%), Gaps = 15/93 (16%)
Query: 82 LSSTATVNIRVTDINDKNPEF-------QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
L + A + VTD+ND P F + LP E ++P G V RV A D D+G N
Sbjct: 450 LRAEAAFVLHVTDVNDNAPAFDRQLYRPEPLP-EVALP----GSFVARVTARDPDQGTNG 504
Query: 135 VVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
V YS+ F +D +G + T LDYE
Sbjct: 505 QVTYSLAPGAHTRWFSIDPTSGIVTTAALLDYE 537
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD-EGQNAVVYYSVPEDIP 145
V +RV D N+ P F P ++PE + G + A+DAD G N+ V Y + P
Sbjct: 1420 VQVRVQDENEHAPAFARDPLALALPENPEPGATLYTFRASDADGPGPNSDVRYRLLRQEP 1479
Query: 146 FV----VDANTGDIRTNKALDYEKQQLYL 170
V +DA TG + + LD E L
Sbjct: 1480 PVPALRLDARTGALSAPRGLDRETTPALL 1508
Score = 35.4 bits (80), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 72 HQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADE 130
H GP + + A + + V D+ND +P F Y+ + E G A+ V ATD D
Sbjct: 2350 HDGPHEGQ------ANLTVFVEDVNDNSPAFSQTLYQVMLLEHTPPGSAILSVSATDRDS 2403
Query: 131 GQNAVVYYSVPEDIP-FVVDANTGDIRTN 158
G N V Y + F +D N G + T
Sbjct: 2404 GANGHVSYHLASSAEGFSIDPNNGTLFTT 2432
>gi|386118337|gb|AFI99116.1| seven transmembrane protocadherin flamingo [Clytia hemisphaerica]
Length = 2923
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 80/174 (45%), Gaps = 29/174 (16%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDA------------ASYFN 65
++G + V ATD D+G+ + Y L + N+T A SY
Sbjct: 770 DIGTVIKSVLATDADTGENARITYSLQPGSPIDTFGIVNDTGAITTKKKLDRETTKSYTL 829
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
+ A++H P + G ATV I VTD+ND P F Y F++ E + G VG +
Sbjct: 830 VVKASDHGKPFKKFG----FATVVITVTDVNDNKPAFTKNLYTFTIEEDAKIGAVVGHLQ 885
Query: 125 ATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
ATD DEG+N V Y E F ++A +G IRT K LD E + + V I
Sbjct: 886 ATDNDEGRNKEVRYQFKERKHEYFSINAESGSIRTIKLLDRETIERFTFEVLAI 939
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 24/170 (14%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ---------- 77
++G + ++ATD D G+ V Y+ + + YF+++ + I+
Sbjct: 876 KIGAVVGHLQATDNDEGRNKEVRYQFKERKHE---YFSINAESGSIRTIKLLDRETIERF 932
Query: 78 -------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDA 128
D+G L ++ +V I + D+ D NP F Y F++PE + VGR+ AT A
Sbjct: 933 TFEVLAIDQGTPALQTSTSVIIDIEDVQDSNPVFTEKVYNFTIPENS-LVEVGRIRATLA 991
Query: 129 DEG-QNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D+ ++++VY F + + G IR N LDYEKQ Y V ++S
Sbjct: 992 DDAFRHSMVYSFTKYQTTFRIASLQGIIRANSPLDYEKQHHYQLHVRVVS 1041
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 56 NNTDAASYFNLD-PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
N D A F++D A + P S+T T+ ++V D+ND P F Y +V EG
Sbjct: 293 NREDGAERFSIDIRAIDLNDPSN-----SATTTIRVKVLDVNDNAPTFAESSYSITVDEG 347
Query: 115 Q-DGLAVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
Q + V ATDADEG N + YS+ +PF +D +G I++ LD E Y
Sbjct: 348 QVANKYILTVRATDADEGSNQEIRYSIVNKANVQVPFQIDPISGAIKSTDVLDRETHPYY 407
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 28/161 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDN----------------------NTDAASYFNLDPAT 70
++ V+ATD D G + Y +++ + + Y+N
Sbjct: 354 ILTVRATDADEGSNQEIRYSIVNKANVQVPFQIDPISGAIKSTDVLDRETHPYYNFTVRA 413
Query: 71 EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
E QG ++ L + +V+I + D ND +P+F Y+ S+PE G V ++ A D D
Sbjct: 414 EDQGKVK----LHTDVSVSITLRDKNDNSPKFSKDVYKLSIPENTTVGSVVFKLDAVDDD 469
Query: 130 EGQNAVVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
GQN V+ + + ++ F ++ +TG+I +A+D++K Q +
Sbjct: 470 IGQNGVIEFRPLDSNLRFRINTSTGEIILKEAVDFDKYQRF 510
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 23/164 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNN--------------TDAASYFNLDPATEHQG 74
+G + ++ A D D G+ G++E+R LD+N +A + +
Sbjct: 456 VGSVVFKLDAVDDDIGQNGVIEFRPLDSNLRFRINTSTGEIILKEAVDFDKYQRFSRFTV 515
Query: 75 PIQDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQD---GLAVGRVHATDAD 129
D+G A + +T D+ND P F +E + +D G V ++ A D D
Sbjct: 516 VAFDKGSPPKYANTEVEITIEDVNDNAPRFAKRIFERTSDIMEDIKVGSFVYKLSARDRD 575
Query: 130 EGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G N + + + P+D PF +D +G+I +K LDYE + Y
Sbjct: 576 SGPNGDITFKLEDGLPQDFPFELDPKSGEITVSKGLDYETTKSY 619
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI 144
A I VTD N+ +P F Y+++V E D G + V ATDAD G+NA + YS+
Sbjct: 740 AYFKIEVTDANNNSPRFGQDVYQWNVLENADIGTVIKSVLATDADTGENARITYSLQPGS 799
Query: 145 P---FVVDANTGDIRTNKALDYEKQQLY 169
P F + +TG I T K LD E + Y
Sbjct: 800 PIDTFGIVNDTGAITTKKKLDRETTKSY 827
Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 30/168 (17%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL----- 82
++G + ++ A D+DSG G + ++L D F LDP + G I GL
Sbjct: 561 KVGSFVYKLSARDRDSGPNGDITFKLEDGLPQDFP-FELDPKS---GEITVSKGLDYETT 616
Query: 83 -----------------SSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVH 124
T V + ++ND NP+F QS Y+ + + + G A+ +V
Sbjct: 617 KSYKFGVIAVDNGHPPKKDTTQVVFNIGNVNDNNPKFKQSSYYKEILEDTRRGEAIEKVE 676
Query: 125 ATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D+ N Y++ E D F +D G + LDY+++ +Y
Sbjct: 677 AFDPDQLSNEDFEYAIEEGNSDDCFGIDPFQGVLFLKCDLDYKRKNMY 724
>gi|332030986|gb|EGI70612.1| Protein dachsous [Acromyrmex echinatior]
Length = 2470
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 85/179 (47%), Gaps = 31/179 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QG 74
FYG + G + V A D D GK L+ Y ++ N S F +DP T +
Sbjct: 236 FYGFELLENLPSGTVVGSVSAIDPDIGKNSLLRYTVVQAN----SSFTVDPDTGEIITRE 291
Query: 75 PI--------------QDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEF-SVPEGQD- 116
P+ +D+G S A V+++VT D+ND +PE + SV E Q
Sbjct: 292 PLDRETKSVHELVLEARDQGTPSRAARVSLKVTVLDVNDNSPEIVDPQGDVVSVREEQPP 351
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
G V RV A D D G+NA V YS+P+D F +D TG IRT LD+E++ +Y
Sbjct: 352 GTEVARVRAMDMDLGENASVTYSIPKDRDSDGYNVFTIDPITGMIRTKAVLDHEERNVY 410
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 76/158 (48%), Gaps = 26/158 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQGPIQ 77
++QV A D D+G + YRL ++ F + P T H +
Sbjct: 149 ILQVTAVDLDTGNNARLSYRL-----QGSTAFRISPNTGWIYLAQSLDREILDRHTLTVL 203
Query: 78 --DEGGLSSTAT--VNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQ 132
D G ++TA+ V + V D ND +P F+ Y F + E G VG V A D D G+
Sbjct: 204 AIDNGSPAATASASVLVMVLDDNDNDPRFEKDFYGFELLENLPSGTVVGSVSAIDPDIGK 263
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLY 169
N+++ Y+V + + F VD +TG+I T + LD E + ++
Sbjct: 264 NSLLRYTVVQANSSFTVDPDTGEIITREPLDRETKSVH 301
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 71/164 (43%), Gaps = 21/164 (12%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDE------------ 79
++M VKA D D G G + Y + + + NL GP+ E
Sbjct: 1000 SVMSVKAIDPDQGVNGKITYAIAEETSWLFRVDNLTGVVTTAGPLDRERQSNYTFLVVAT 1059
Query: 80 -GGL----SSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQN 133
G+ ++ V I ++DIND P F+ P+ VP + G + RV A DAD+G N
Sbjct: 1060 DSGMYDAKRTSIPVEIIISDINDNAPIFEEYPFRTRVPISTKPGQNILRVSAKDADDGVN 1119
Query: 134 AVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
+ YS+ E F + +TG++ + +L + + Y V
Sbjct: 1120 GDIVYSLINEQEKPKFRIHPSTGEVTASLSLSQDNGKTYYLEVL 1163
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 21/158 (13%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------- 70
+ H L V L ATD D + Y L N+ + F +D T
Sbjct: 39 ESHPLHVPLYVAHATDPDITPLLPIRYILGQNSNN---LFGIDERTGELYLAKRLDYETQ 95
Query: 71 EHQGPI---QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
+ G + D GLS+ ++++ V D+ND P F+ Y VPEG + +V A
Sbjct: 96 QRHGLLISALDGAGLSANLSLSVEVQDVNDNPPVFERNEYHVEVPEGARLDSQILQVTAV 155
Query: 127 DADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYE 164
D D G NA + Y + F + NTG I ++LD E
Sbjct: 156 DLDTGNNARLSYRLQGSTAFRISPNTGWIYLAQSLDRE 193
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
L + V IR++D+ND P F + Y +V EG G V ++ A+DAD+G N+ + Y +
Sbjct: 1315 LEAYVKVIIRISDVNDNPPIFTQIQYSATVLEGNTKGDFVVKLSASDADQGLNSRILYHI 1374
Query: 141 ----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
P++ + +G +RTN LD E ++ Y
Sbjct: 1375 VDGNPDNAFTISPPYSGIVRTNIVLDREIREKY 1407
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 72/179 (40%), Gaps = 28/179 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y A + + G ++++ A+D D G + Y ++D N D A F + P + G ++
Sbjct: 1340 YSATVLEGNTKGDFVVKLSASDADQGLNSRILYHIVDGNPDNA--FTISPP--YSGIVRT 1395
Query: 78 -------------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
D+G L+ TA +++RV DIND P F SV EG
Sbjct: 1396 NIVLDREIREKYRLTIIATDQGNPQLTGTAALSVRVIDINDNQPTFPKHSI-ISVSEGTA 1454
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
G + + A D D + PF +D G + K LD E + Y RV
Sbjct: 1455 MGTVLTTITANDVDSSPALTYRFDDMSSGPFSIDRYGGKVVLRKRLDAEMRSEYTLRVI 1513
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 82 LSSTATVNIRVTDINDKNPEFQ-SLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV 140
L T+ + V D ND +PEF+ Y +VPE Q+ + + ATD D+G+N ++YS+
Sbjct: 840 LLDVTTLEVIVMDENDNSPEFRPGSCYTLAVPENQETSVIHVIAATDLDDGKNGEIFYSI 899
Query: 141 PE---DIPFVVDANTG 153
FV++ +TG
Sbjct: 900 ESGNIGAKFVLNPSTG 915
Score = 42.4 bits (98), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 76 IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDAD--EGQN 133
I +G +T + +RVTD+ND P+F+ Y + EGQ + V+ATD D E +
Sbjct: 1513 IASDGIHEATTDLTVRVTDLNDNTPQFKQAVYVAVLSEGQGKQEILTVNATDDDLSEENS 1572
Query: 134 AVVYYSVPEDIPFVVDANTGDIRTN 158
V YY + F VD TG + N
Sbjct: 1573 RVRYYLLRPVKGFSVDPVTGVLTVN 1597
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 73/178 (41%), Gaps = 40/178 (22%)
Query: 36 VKATDKDSGKFGLVEYRL----------LDNNTDAASYFNLD----PATEHQGPIQDEGG 81
+ ATD D GK G + Y + L+ +T S NLD P +D G
Sbjct: 882 IAATDLDDGKNGEIFYSIESGNIGAKFVLNPSTGVLSMLNLDRENVPKYVLTISAKDRGR 941
Query: 82 LSSTATVNIRVT--DINDKNPEF-QSL---------------PYEFSVPEGQD---GLAV 120
S A N+ V DIND P F Q+L P ++ +D +V
Sbjct: 942 PSREAYCNLTVIVLDINDNAPSFVQNLNSGFLYGSNYPANYYPSKYMTTISEDVPPDSSV 1001
Query: 121 GRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
V A D D+G N + Y++ E+ F VD TG + T LD E+Q Y FL+
Sbjct: 1002 MSVKAIDPDQGVNGKITYAIAEETSWLFRVDNLTGVVTTAGPLDRERQSNY---TFLV 1056
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 92 VTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP--FVV 148
V D+ND P F++ SVPE + + HATD D + Y + ++ F +
Sbjct: 18 VEDVNDNAPSFRTNTVRISVPESHPLHVPLYVAHATDPDITPLLPIRYILGQNSNNLFGI 77
Query: 149 DANTGDIRTNKALDYEKQQLY 169
D TG++ K LDYE QQ +
Sbjct: 78 DERTGELYLAKRLDYETQQRH 98
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 65/161 (40%), Gaps = 31/161 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-----ATEHQGPI------- 76
+G + +A+D D G FG + Y ++ + A+ + ++D A + G +
Sbjct: 1864 IGTVVFSARASDLDRGIFGSLNYSII---SAASGFSDIDDSWKLFAVDETGTVITRAVFD 1920
Query: 77 -------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD--GLAVG 121
D GG ++ V + + ++ P+F Y F + G +G
Sbjct: 1921 YEQRNRYAFTLRATDAGGRTAAVRVRVEIDSRDEFFPQFTERMYRFGIRSNTQVPGTVIG 1980
Query: 122 RVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKAL 161
V ATD D+G + V Y + P F ++ TG + + L
Sbjct: 1981 HVTATDRDKGPDGRVVYQLTSQHPYFKLNRTTGALIVKQKL 2021
>gi|195325640|gb|ACF95728.1| cadherin-14/18 [Mustela putorius furo]
Length = 441
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 80/175 (45%), Gaps = 37/175 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT-------------- 70
++G +++QV ATD D +G V Y +L YF++DP T
Sbjct: 119 DMGTSVLQVTATDADDPTYGNSARVVYSILQ----GQPYFSVDPKTGVIRTALYNMDREA 174
Query: 71 -EHQGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
EH + GGLS + TVNI +TD+ND P F Y+ V E Q G AVG
Sbjct: 175 REHYSVVIQAKDMAGQVGGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVRESAQVGSAVG 234
Query: 122 RVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A DAD G NA + YS+ I + G + K L+YEK++ Y
Sbjct: 235 KIKANDADTGSNADMTYSIINGDGIGIFSISTDKETREGILSLKKPLNYEKKKSY 289
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE D G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 93 IKVQDINDNAPKFTDGPYIVTVPEMSDMGTSVLQVTATDADDPTYGNSARVVYSILQGQP 152
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IRT +D E ++ Y
Sbjct: 153 YFSVDPKTGVIRTALYNMDREAREHY 178
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 75/185 (40%), Gaps = 37/185 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH------ 72
Y R+ ++G + ++KA D D+G + Y ++ N D F++ E
Sbjct: 219 YQLYVRESAQVGSAVGKIKANDADTGSNADMTYSII--NGDGIGIFSISTDKETREGILS 276
Query: 73 -QGPIQDEGGLSSTATV-----------------------NIRVTDINDKNPEFQSLPYE 108
+ P+ E S T T+ I V D+ D+ P F Y
Sbjct: 277 LKKPLNYEKKKSYTLTIEGANTHLDFRFSHLGPFKDATMLKIIVGDV-DEPPLFSMPSYV 335
Query: 109 FSVPE-GQDGLAVGRVHATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYE 164
V E + G VG V A D D + V Y YS +D F +DANTG IRT K LD E
Sbjct: 336 MEVYENAKIGTVVGTVLAQDPDSANSLVRYFIDYSAEDDRCFNIDANTGTIRTTKVLDRE 395
Query: 165 KQQLY 169
+ Y
Sbjct: 396 ETPWY 400
Score = 36.2 bits (82), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ ++D+G +V Y E F++D TGDI + K+LD E++ Y+
Sbjct: 14 GPDPQYVGKLHS-NSDKGDGSVKYILTGEGAGTIFIIDDTTGDIHSTKSLDREQKTHYV 71
>gi|281363131|ref|NP_001163113.1| starry night, isoform B [Drosophila melanogaster]
gi|386767714|ref|NP_001246257.1| starry night, isoform D [Drosophila melanogaster]
gi|272432431|gb|ACZ94388.1| starry night, isoform B [Drosophila melanogaster]
gi|383302401|gb|AFH08011.1| starry night, isoform D [Drosophila melanogaster]
Length = 3574
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------- 68
S Y A + +G +++QV A+D D G G ++Y L D + + S F +DP
Sbjct: 1009 SPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGS-FVIDPTSGTIRT 1067
Query: 69 ---------ATEHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
A H I + G LSST V IR+ D+ND P F S VPE
Sbjct: 1068 NKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSP 1127
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV 140
G VG +HA D DEG NAVV+YS+
Sbjct: 1128 VGSVVGEIHAHDPDEGVNAVVHYSI 1152
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 83/178 (46%), Gaps = 27/178 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPATEH--- 72
Y A + +G T++ V ATD D G + Y L + N + F+++P T
Sbjct: 902 YSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVT 961
Query: 73 QGPIQDE-------------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
P+ E GG LS T V I VTD+ND P F+S Y+ S+ E
Sbjct: 962 NAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDAL 1021
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G +V +V A+D D G N + Y + ED FV+D +G IRTNK LD E ++
Sbjct: 1022 VGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVF 1079
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 83/191 (43%), Gaps = 44/191 (23%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--------FNLDPAT 70
+ A R+ +G T++ ++ATD+D GK +EY + + TD A F +D
Sbjct: 469 FEASIREGATVGSTVITLRATDQDIGKNAEIEYGI-EAVTDGAGLAQDQEMPIFRID--- 524
Query: 71 EHQGPIQDEGGL-------------------------SSTATVNIRVTDINDKNPEFQSL 105
G I L ++TA+V ++V D ND P+F
Sbjct: 525 SRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSER 584
Query: 106 PYEFSVPEGQDG----LAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTN 158
Y VPE Q G V + ATDAD+G NA + Y++ F +D+ +GD+
Sbjct: 585 TYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLV 644
Query: 159 KALDYEKQQLY 169
K LDYE + Y
Sbjct: 645 KPLDYESVRSY 655
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 55/102 (53%), Gaps = 9/102 (8%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG S TATV+I +TD N+ P F++ PY SV E G V V ATD+D G NA +
Sbjct: 873 DSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQI 932
Query: 137 YYSVPEDI--------PFVVDANTGDIRTNKALDYEKQQLYL 170
YS+ E+ PF ++ TG I TN LD E YL
Sbjct: 933 TYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYL 974
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 25/158 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------- 76
T+ ++ATD D G + Y ++ NT S F++D + +
Sbjct: 602 TVAHIRATDADQGNNAAIRYAIIGGNTQ--SQFSIDSMSGDVSLVKPLDYESVRSYRLVI 659
Query: 77 --QDEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
QD G S + T + V D ND P F + ++ SV E G + RV A D+DEG
Sbjct: 660 RAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEG 719
Query: 132 QNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQ 166
NA + YS+ E + P VD TG ++T K LD E+Q
Sbjct: 720 ANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQ 757
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
S T T+ + V D ND +P F++ +E S+ EG G V + ATD D G+NA + Y +
Sbjct: 445 SGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIE 504
Query: 142 -----------EDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+++P F +D+ +G I T +LD E Y
Sbjct: 505 AVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSY 544
Score = 43.1 bits (100), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 29/167 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP-- 75
+G +++V+A D D G + Y + + + + +DP T E QG
Sbjct: 704 VGYNIIRVQAYDSDEGANAEITYSISERDDNFP--LAVDPRTGWVQTIKPLDREEQGRFA 761
Query: 76 ---IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDA 128
+ +GG+ S++++V I V D+ND +P F YE +V E Q G V V ATD
Sbjct: 762 FQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDP 821
Query: 129 DEGQNAVVYYSVPEDIP---FVVDANTGD--IRTNKALDYEKQQLYL 170
DE ++ ++Y + F + + G I ++LDY++++ +L
Sbjct: 822 DE--DSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFL 866
>gi|6049492|gb|AAF02618.1|AF172329_1 starry night protein [Drosophila melanogaster]
Length = 3579
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------- 68
S Y A + +G +++QV A+D D G G ++Y L D + + S F +DP
Sbjct: 1009 SPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGS-FVIDPTSGTIRT 1067
Query: 69 ---------ATEHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
A H I + G LSST V IR+ D+ND P F S VPE
Sbjct: 1068 NKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSP 1127
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV 140
G VG +HA D DEG NAVV+YS+
Sbjct: 1128 VGSVVGEIHAHDPDEGVNAVVHYSI 1152
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 83/178 (46%), Gaps = 27/178 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPATEH--- 72
Y A + +G T++ V ATD D G + Y L + N + F+++P T
Sbjct: 902 YSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVT 961
Query: 73 QGPIQDE-------------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
P+ E GG LS T V I VTD+ND P F+S Y+ S+ E
Sbjct: 962 NAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDAL 1021
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G +V +V A+D D G N + Y + ED FV+D +G IRTNK LD E ++
Sbjct: 1022 VGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVF 1079
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 83/191 (43%), Gaps = 44/191 (23%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--------FNLDPAT 70
+ A R+ +G T++ ++ATD+D GK +EY + + TD A F +D
Sbjct: 469 FEASIREGATVGSTVITLRATDQDIGKNAEIEYGI-EAVTDGAGLAQDQEMPIFRID--- 524
Query: 71 EHQGPIQDEGGL-------------------------SSTATVNIRVTDINDKNPEFQSL 105
G I L ++TA+V ++V D ND P+F
Sbjct: 525 SRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSER 584
Query: 106 PYEFSVPEGQDG----LAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTN 158
Y VPE Q G V + ATDAD+G NA + Y++ F +D+ +GD+
Sbjct: 585 TYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLV 644
Query: 159 KALDYEKQQLY 169
K LDYE + Y
Sbjct: 645 KPLDYESVRSY 655
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 55/102 (53%), Gaps = 9/102 (8%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG S TATV+I +TD N+ P F++ PY SV E G V V ATD+D G NA +
Sbjct: 873 DSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQI 932
Query: 137 YYSVPEDI--------PFVVDANTGDIRTNKALDYEKQQLYL 170
YS+ E+ PF ++ TG I TN LD E YL
Sbjct: 933 TYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYL 974
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 25/158 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------- 76
T+ ++ATD D G + Y ++ NT S F++D + +
Sbjct: 602 TVAHIRATDADQGNNAAIRYAIIGGNTQ--SQFSIDSMSGDVSLVKPLDYESVRSYRLVI 659
Query: 77 --QDEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
QD G S + T + V D ND P F + ++ SV E G + RV A D+DEG
Sbjct: 660 RAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEG 719
Query: 132 QNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQ 166
NA + YS+ E + P VD TG ++T K LD E+Q
Sbjct: 720 ANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQ 757
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
S T T+ + V D ND +P F++ +E S+ EG G V + ATD D G+NA + Y +
Sbjct: 445 SGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIE 504
Query: 142 -----------EDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+++P F +D+ +G I T +LD E Y
Sbjct: 505 AVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSY 544
Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 29/167 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP-- 75
+G +++V+A D D G + Y + + + + +DP T E QG
Sbjct: 704 VGYNIIRVQAYDSDEGANAEITYSISERDDNFP--LAVDPRTGWVQTIKPLDREEQGRFA 761
Query: 76 ---IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDA 128
+ +GG+ S++++V I V D+ND +P F YE +V E Q G V V ATD
Sbjct: 762 FQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDP 821
Query: 129 DEGQNAVVYYSVPEDIP---FVVDANTGD--IRTNKALDYEKQQLYL 170
DE ++ ++Y + F + + G I ++LDY++++ +L
Sbjct: 822 DE--DSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFL 866
>gi|332820147|ref|XP_526682.3| PREDICTED: protocadherin Fat 4 isoform 2 [Pan troglodytes]
Length = 4981
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 83/170 (48%), Gaps = 22/170 (12%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL++Y + N + A + +
Sbjct: 3096 ATIPESHSVGSIVRTVSARDRDAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYE 3155
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
+H+ I D G ++ T +V + V D+ND +P F S Y +V E G V
Sbjct: 3156 LCQKHEMTISAIDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIH 3215
Query: 123 VHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y+V D+ FV+D NTG I T LD+E +Q Y
Sbjct: 3216 LNATDADSGTNAVIAYTVQSSDSDL-FVIDPNTGVITTQGFLDFETKQSY 3264
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F +DP + E +
Sbjct: 1756 GSKIMQLTAMDADEGANALVTYTIISGADDS---FRIDPESGDLIATRRLDRERRSKYSL 1812
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQ 132
D+G SS +NI V+D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1813 LVRADDGLQSSDMRINITVSDVNDHTPKFSRPVYSFDIPEDTIPGSLVAAILATDDDSGV 1872
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG + LDYE QQ Y+ V
Sbjct: 1873 NGEITYIVNEDDEDGIFFLNPITGVFNLTRLLDYEVQQYYILTV 1916
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 75/168 (44%), Gaps = 22/168 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y ++D A+ F ++P+T
Sbjct: 2774 SQIFSAHVPENSSLGYTVTRVTTSDEDVGINAISRYSIMD----ASLPFTINPSTGDIVI 2829
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V I VTDIND P F Y PE + G
Sbjct: 2830 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNAPRFSRTSYYLDCPELTEIGS 2889
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
V +V ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 2890 KVAQVFATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQILKYQN 2937
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 76/162 (46%), Gaps = 23/162 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI----QDEGGL--- 82
G L+ ++ATD D G G V + L + TD S F LDP + I ++E
Sbjct: 599 GTELLMLRATDGDLGDNGTVRFSLQEAETDRRS-FRLDPVSGRLSTISSLDREEQAFYSL 657
Query: 83 ------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
SS A +N+ + DIND +P F + Y + E + G + + V ATD D
Sbjct: 658 LVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKENEPGGSYITTVSATDPD 717
Query: 130 EGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V YS+ + F V+A +G I T ALD E++ Y
Sbjct: 718 LGTNGTVKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAY 759
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 75/173 (43%), Gaps = 21/173 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-----------AASYFNL 66
FY A + +++V A+D D G GL+ Y ++ N + A L
Sbjct: 1214 FYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIVKGNEERQFAIDSTSGQVALIGKL 1273
Query: 67 D----PATEHQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
D PA D G L+ST T+NI + D ND P F V E + G
Sbjct: 1274 DYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGEL 1333
Query: 120 VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD+D G NA +YYS+ F + NTG I K LD+E Q LY
Sbjct: 1334 VSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGSIFLAKKLDFETQSLY 1386
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 24/162 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V A DKDSG G ++Y +++ N + + F+++ AT ++
Sbjct: 2687 ILTVSAMDKDSGPNGQLDYEIVNGNMENS--FSINHATGEIRSVRPLDREKVSHYVLTIK 2744
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G S + +V I + D ND P F + + VPE G V RV +D D G
Sbjct: 2745 SSDKGSPSQSTSVKVMINILDENDNAPRFSQI-FSAHVPENSSLGYTVTRVTTSDEDVGI 2803
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA+ YS+ + +PF ++ +TGDI ++ L+ E Y RV
Sbjct: 2804 NAISRYSIMDASLPFTINPSTGDIVISRPLNREDTDRYRIRV 2845
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 38 ATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGGLSSTAT--- 87
ATD D G G+ YR++ N A F LD G + +GGL T
Sbjct: 159 ATDSDIGSNGVDHRSYRIIRGN--EAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQY 216
Query: 88 -------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
VN+ V DIND P F S Y+ VPE G +V +V A D
Sbjct: 217 QLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAAD 276
Query: 128 ADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ADEG NA + Y + E PF +D TG I + LD+E ++ Y
Sbjct: 277 ADEGTNADIRYRLQDEGTPFQMDPETGLITVREPLDFEARRQY 319
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPIQ---- 77
T++QV A D D G + Y L N D A + LD T+ + +
Sbjct: 2278 TILQVVARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELGVTQSLDRETKERFVLMITAT 2337
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNA 134
D G L+ T T+N+ V D+ND P F S Y ++PE G V V+A+DAD NA
Sbjct: 2338 DSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIPEDAPTGTDVLLVNASDADASTNA 2397
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V+ + + F ++ +TG I T+ LD E + Y
Sbjct: 2398 VIRI-IGGNSQFTINPSTGQIITSALLDRETKDNY 2431
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF---NLDPAT 70
D L Y + + +V+A+DKDSG G + Y + + NT DA F L +
Sbjct: 997 DQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGNTGDAFGIFPDGQLYIKS 1056
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E +QD LS+T V + + D+ND P F S Y F E Q G
Sbjct: 1057 ELDRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAG 1116
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
VG+V A D D G N V YS P F + A +G+I D E
Sbjct: 1117 SFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTHQFDRE 1164
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 76/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3210 GTTVIHLNATDADSGTNAVIAYTVQSSDSD---LFVIDPNT---GVITTQGFLDFETKQS 3263
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S ATVN+++ N+ P F S Y F + E G VG V A+
Sbjct: 3264 YHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFAS 3323
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F ++ TG I + LD EK+ ERV L
Sbjct: 3324 DRDLGTDGEVHYLIFGNSRKKGFQINKKTGQIYVSGILDREKE----ERVSL 3371
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L ATV++ + DIND P+F Y+ ++ E L V RV A+D DEG N +++YS+
Sbjct: 1190 LKDQATVHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSI 1249
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E+ F +D+ +G + LDYE Y
Sbjct: 1250 VKGNEERQFAIDSTSGQVALIGKLDYEATPAY 1281
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 75/167 (44%), Gaps = 32/167 (19%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRL----------LDNNTDAAS------------YF 64
++G L++V A D KD G VEY + LDN+T S YF
Sbjct: 2997 KVGTKLIRVTAIDDKDFGLNSEVEYFISNDNHLGKFKLDNDTGWISVASSLISDLNQNYF 3056
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRV 123
A + P LSS ATV+I VT+ N PEF ++PE G V V
Sbjct: 3057 ITVTAKDKGNP-----PLSSQATVHITVTEENYHTPEFSQSHMSATIPESHSVGSIVRTV 3111
Query: 124 HATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQ 167
A D D N ++ YS+ E+ F ++++TG + KALDYE Q
Sbjct: 3112 SARDRDAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYELCQ 3158
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 71/174 (40%), Gaps = 32/174 (18%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPATEHQGPIQ 77
+ + G ++ Q KA D D G G+V Y L N N + L P H G Q
Sbjct: 904 ENWQAGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFTINEKNGTISLLGPLDVHAGSYQ 963
Query: 78 DE--------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
E LSS+ + + V D+ND +P F L YE ++ E + +V A+D
Sbjct: 964 IEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDK 1023
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYLERV 173
D G N + Y++ E NTGD + LD E Q Y+ V
Sbjct: 1024 DSGANGEIAYTIAE-------GNTGDAFGIFPDGQLYIKSELDRELQDRYVLMV 1070
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 27/165 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGPI--- 76
G ++QV A D D G G V Y +++ NT+ F +D P + P
Sbjct: 2170 GTDIIQVFAADGDEGTNGQVRYGIVNGNTNQE--FRIDSVTGAITVAKPLDREKTPTYHL 2227
Query: 77 ----QDEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDA 128
D G + T+TV+I + DIND P F+ PY +VPE L + +V A D
Sbjct: 2228 TVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPENLGTLPRTILQVVARDD 2287
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D+G N+ + Y + ED F + A +G++ ++LD E ++ ++
Sbjct: 2288 DQGSNSKLSYVLFGGNEDNAFTLSA-SGELGVTQSLDRETKERFV 2331
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +ATD DSG +EY LL+ + S +D G + D
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATD 2128
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y+ + E G + +V A D DEG N
Sbjct: 2129 KGQPSLSSSTEVVVVVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQ 2188
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y + + F +D+ TG I K LD EK Y
Sbjct: 2189 VRYGIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTY 2225
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1724 AEVEITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTYTIISGA 1783
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ + LD E++ Y
Sbjct: 1784 DDSFRIDPESGDLIATRRLDRERRSKY 1810
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LSS+ +V + VTD+ND P FQ PY +P G V V TDAD G N+ ++YS+
Sbjct: 2446 LSSSTSVLVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSFVFAVTVTDADIGPNSELHYSL 2505
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 70/164 (42%), Gaps = 35/164 (21%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--DEGGLS---------- 83
+ ATD DSG + Y ++ N +F++ +EH G + GGL
Sbjct: 497 ISATDGDSGLNANLRYSIVSGN--GLGWFHI---SEHSGLVTTGSSGGLDRELASQIVLN 551
Query: 84 ------------STATVNIRVTDINDKNPEF-QSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
S A + + + D+ND+ P F Q Y+ SV E G + + ATD D
Sbjct: 552 ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLMLRATDGD 611
Query: 130 EGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V +S+ E F +D +G + T +LD E+Q Y
Sbjct: 612 LGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFY 655
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
G ++ VNI V D+ND +P F Q++ V Q G ++ + A D DEG N +V Y
Sbjct: 871 GTVTGDTMVNITVKDLNDNSPHFLQAIESVNVVENWQAGHSIFQAKAVDPDEGVNGMVLY 930
Query: 139 SV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
S+ P+++ F ++ G I LD +E
Sbjct: 931 SLKQNPKNL-FTINEKNGTISLLGPLDVHAGSYQIE 965
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
SS ++I V D+ND P F+ P+ + E + V A D D G N + Y +
Sbjct: 2649 FSSYEKLDITVLDVNDNAPIFKEDPFISEILENLSPRKILTVSAMDKDSGPNGQLDYEIV 2708
Query: 142 E---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ F ++ TG+IR+ + LD EK Y+
Sbjct: 2709 NGNMENSFSINHATGEIRSVRPLDREKVSHYV 2740
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 68/174 (39%), Gaps = 20/174 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G V+Y + + ++ LD
Sbjct: 694 YFAHIKENEPGGSYITTVSATDPDLGTNGTVKYSISAGDRSRFQVNAQSGVISTRMALDR 753
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V I V D D P F + Y F V E G VG
Sbjct: 754 EEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFENVALGYHVG 813
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A+ D N + Y D F ++ TG + T +D E+Q Y +V
Sbjct: 814 SVSASTMDLNSN-ISYLITTGDQKGMFAINQVTGQLTTANVIDREEQSFYQLKV 866
Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N + Y + +
Sbjct: 1515 VTILVTDLNDNVPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEIEYEIINGDTDT 1574
Query: 146 FVVDANTGDIRTNKAL 161
F+VD +GD+R AL
Sbjct: 1575 FIVDRYSGDLRVASAL 1590
Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG + Y + N F++ P T E Q
Sbjct: 1329 RIGELVSSVTATDSDSGDNADLYYSITGTNNHGT--FSISPNTGSIFLAKKLDFETQSLY 1386
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G SST +V I V D ND P F S+ E G +V V A D
Sbjct: 1387 KLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVTAHD 1446
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + Y++ + +P F +D G I TN +D E L+
Sbjct: 1447 PDADINGQLSYTIIQQMPRGNHFTIDEVKGTIYTNAEIDREFANLF 1492
Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 55/123 (44%), Gaps = 5/123 (4%)
Query: 59 DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
++ S++NL H P +STA V+I + D+ND P F S P +PE
Sbjct: 2009 ESQSFYNL-VVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLS-PKLTYIPENTPID 2066
Query: 118 LAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
V + ATD D G N+ + Y++ P F + G++R LD E+ Y V
Sbjct: 2067 TVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2126
Query: 176 ISK 178
K
Sbjct: 2127 TDK 2129
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNAVVYYSV 140
SS A++ I V DIND P F Y ++ E G V + ATD D G NA + YS+
Sbjct: 456 SSVASLVIFVNDINDHPPVFSQQVYRVNLSEEAPPGSYVSGISATDGDSGLNANLRYSI 514
>gi|332244501|ref|XP_003271412.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4-like [Nomascus
leucogenys]
Length = 4981
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 83/170 (48%), Gaps = 22/170 (12%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL++Y + N + A + +
Sbjct: 3096 ATIPESHSVGSIVRTVSARDRDAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYE 3155
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
+H+ I D G ++ T +V + V D+ND +P F S Y +V E G V
Sbjct: 3156 LCQKHEMTISAIDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIH 3215
Query: 123 VHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y+V D+ FV+D NTG I T LD+E +Q Y
Sbjct: 3216 LNATDADSGTNAVIAYTVQSSDSDL-FVIDPNTGVITTQGFLDFETKQSY 3264
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F +DP + E +
Sbjct: 1756 GSKIMQLTAMDADEGANALVTYTIISGADDS---FRIDPESGDLIATRRLDRERRSKYSL 1812
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQ 132
D+G SS +NI V+D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1813 LVRADDGLQSSDMRINITVSDVNDHTPKFSRPVYSFDIPEDTIPGSLVAAILATDDDSGV 1872
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG + LDYE QQ Y+ V
Sbjct: 1873 NGEITYIVNEDDEDGIFFLNPITGVFNLTRLLDYEVQQYYILTV 1916
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 76/162 (46%), Gaps = 23/162 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI----QDEGGL--- 82
G L+ ++ATD D G G V + L + TD S F LDP + I ++E
Sbjct: 599 GTELLMLRATDGDLGDNGTVRFSLQEAETDRRS-FRLDPVSGRLSTISSLDREEQAFYSL 657
Query: 83 ------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
SS A +N+ + DIND +P F + Y + E + G + + V ATD D
Sbjct: 658 LVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKENEPGGSYITTVSATDPD 717
Query: 130 EGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V YS+ + F V+A +G I T ALD E++ Y
Sbjct: 718 LGTNGTVKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAY 759
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 75/173 (43%), Gaps = 21/173 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-----------AASYFNL 66
FY A + +++V A+D D G GL+ Y ++ N + A L
Sbjct: 1214 FYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEERQFAIDSTSGQVALTGKL 1273
Query: 67 D----PATEHQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
D PA D G L+ST T+NI + D ND P F V E + G
Sbjct: 1274 DYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGEL 1333
Query: 120 VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD+D G NA +YYS+ F + NTG I K LD+E Q LY
Sbjct: 1334 VSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGSIFLAKKLDFETQSLY 1386
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 24/162 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V A DKDSG G ++Y +++ N + + F+++ AT ++
Sbjct: 2687 ILTVSAMDKDSGPNGQLDYEIVNGNMENS--FSINHATGEIRSVRPLDREKVSHYVLTIK 2744
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G S + +V I + D ND P F + + VPE G V RV +D D G
Sbjct: 2745 SSDKGSPSQSTSVKVMINILDENDNAPRFSQI-FSAHVPENSPLGYTVTRVTTSDEDIGI 2803
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA+ YS+ + +PF ++ +TGDI ++ L+ E Y RV
Sbjct: 2804 NAISRYSIMDTSLPFTINPSTGDIVISRPLNREDTDRYRIRV 2845
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 73/168 (43%), Gaps = 22/168 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y ++D + F ++P+T
Sbjct: 2774 SQIFSAHVPENSPLGYTVTRVTTSDEDIGINAISRYSIMDTSLP----FTINPSTGDIVI 2829
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V I VTD+ND P F Y PE + G
Sbjct: 2830 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPELTEIGS 2889
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
V +V A D DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 2890 KVTQVFAADPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQILKYQN 2937
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +ATD DSG +EY LL+ + S +D G + D
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATD 2128
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y+ + E G + +V A D DEG N
Sbjct: 2129 KGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQ 2188
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y + + F +D+ TG I K LD EK Y
Sbjct: 2189 VRYGIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTY 2225
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 72/155 (46%), Gaps = 18/155 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPIQ---- 77
T++QV A D D G + Y L N D A + LD T+ +
Sbjct: 2278 TILQVVARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELGVTQSLDRETKEHFVLMITAT 2337
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNA 134
D G L+ T T+N+ V D+ND P F S Y ++PE G V V+A+DAD NA
Sbjct: 2338 DSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIPEDAPTGTDVLLVNASDADASTNA 2397
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V+ + + F ++ +TG I T+ LD E + Y
Sbjct: 2398 VIRI-IGGNSQFTINPSTGQIITSALLDRETKDNY 2431
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF---NLDPAT 70
D L Y + + +V+A+DKDSG G + Y + + NT DA F L +
Sbjct: 997 DQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGNTGDAFGIFPDGQLYIKS 1056
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E +QD LS+T V + + D+ND P F S Y F E Q G
Sbjct: 1057 ELDRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAG 1116
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
VG+V A D D G N V YS P F + A +G+I D E
Sbjct: 1117 SFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTHQFDRE 1164
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L ATV++ + DIND P+F Y+ ++ E L V RV A+D DEG N +++YS+
Sbjct: 1190 LKDQATVHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSI 1249
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E+ F +D+ +G + LDYE Y
Sbjct: 1250 IKGNEERQFAIDSTSGQVALTGKLDYEATPAY 1281
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 70/163 (42%), Gaps = 33/163 (20%)
Query: 38 ATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGGLSSTAT--- 87
ATD D G G+ YR++ N A F LD G + +GGL T
Sbjct: 159 ATDSDIGSNGVDHRSYRIIRGN--EAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQY 216
Query: 88 -------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
VN+ V DIND P F S Y+ V E G +V +V A D
Sbjct: 217 QLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVTEDAVVGSSVLQVAAAD 276
Query: 128 ADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ADEG NA + Y + E PF +D TG I + LD+E ++ Y
Sbjct: 277 ADEGTNADIRYRLQDEGTPFQMDPETGIITVREPLDFEARRQY 319
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 76/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3210 GTTVIHLNATDADSGTNAVIAYTVQSSDSD---LFVIDPNT---GVITTQGFLDFETKQS 3263
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S ATVN+++ N+ P F S Y F + E G VG V A+
Sbjct: 3264 YHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFAS 3323
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F ++ TG I + LD EK+ ERV L
Sbjct: 3324 DRDLGTDGEVHYLIFGNSRKKGFQINEKTGQIYVSGILDREKE----ERVSL 3371
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 78/162 (48%), Gaps = 22/162 (13%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQG-- 74
++G L++V A D KD G VEY + LDN+T S + + +Q
Sbjct: 2997 KVGTKLIKVTAIDDKDFGLNSEVEYFISNDNHLGKFKLDNDTGWISVASSLISDLNQNFF 3056
Query: 75 ---PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D+G LSS ATV+I VT+ N PEF ++PE G V V A D
Sbjct: 3057 ITVTAKDKGNPPLSSQATVHITVTEENYHTPEFSQSHMSATIPESHSVGSIVRTVSARDR 3116
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQ 167
D N ++ YS+ E+ F ++++TG + KALDYE Q
Sbjct: 3117 DAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYELCQ 3158
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 71/174 (40%), Gaps = 32/174 (18%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPATEHQGPIQ 77
+ + G ++ Q KA D D G G+V Y L N N + L P H G Q
Sbjct: 904 ENWQAGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINEKNGTISLLGPLDVHAGSYQ 963
Query: 78 DE--------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
E LSS+ + + V D+ND +P F L YE ++ E + +V A+D
Sbjct: 964 IEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDK 1023
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYLERV 173
D G N + Y++ E NTGD + LD E Q Y+ V
Sbjct: 1024 DSGANGEIAYTIAE-------GNTGDAFGIFPDGQLYIKSELDRELQDRYVLMV 1070
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 27/165 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGPI--- 76
G ++QV A D D G G V Y +++ NT+ F +D P + P
Sbjct: 2170 GTDIIQVFAADGDEGTNGQVRYGIVNGNTNQE--FRIDSVTGAITVAKPLDREKTPTYHL 2227
Query: 77 ----QDEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDA 128
D G + T+TV+I + DIND P F+ PY +VPE L + +V A D
Sbjct: 2228 TVQATDRGSTPRTDTSTVSIVLLDINDFVPIFELSPYSVNVPENLGTLPRTILQVVARDD 2287
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D+G N+ + Y + ED F + A +G++ ++LD E ++ ++
Sbjct: 2288 DQGSNSKLSYVLFGGNEDNAFTLSA-SGELGVTQSLDRETKEHFV 2331
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1724 AEVEITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTYTIISGA 1783
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ + LD E++ Y
Sbjct: 1784 DDSFRIDPESGDLIATRRLDRERRSKY 1810
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LSS+ +V + VTD+ND P FQ PY +P G V V TDAD G N+ ++YS+
Sbjct: 2446 LSSSTSVLVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSFVFAVTVTDADIGPNSELHYSL 2505
Score = 42.7 bits (99), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 70/164 (42%), Gaps = 35/164 (21%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--DEGGLS---------- 83
+ ATD DSG + Y ++ N +F++ +EH G + GGL
Sbjct: 497 ISATDGDSGLNANLRYSIVSGN--GLGWFHI---SEHSGLVTTGSSGGLDRELASQIVLN 551
Query: 84 ------------STATVNIRVTDINDKNPEF-QSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
S A + + + D+ND+ P F Q Y+ SV E G + + ATD D
Sbjct: 552 ISARDQGVHPKVSYARLVVTLLDVNDEKPLFSQPEGYDVSVVENAPTGTELLMLRATDGD 611
Query: 130 EGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V +S+ E F +D +G + T +LD E+Q Y
Sbjct: 612 LGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFY 655
Score = 42.4 bits (98), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
G ++ VNI V D+ND +P F Q++ V Q G ++ + A D DEG N +V Y
Sbjct: 871 GTVTGDTMVNITVKDLNDNSPHFLQAIESVNVVENWQAGHSIFQAKAVDPDEGVNGMVLY 930
Query: 139 SV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
S+ P+++ F ++ G I LD +E
Sbjct: 931 SLKQNPKNL-FAINEKNGTISLLGPLDVHAGSYQIE 965
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
SS ++I V D+ND P F+ P+ + E + V A D D G N + Y +
Sbjct: 2649 FSSYEKLDITVLDVNDNAPIFKEDPFISEILENLSPRKILTVSAMDKDSGPNGQLDYEIV 2708
Query: 142 E---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ F ++ TG+IR+ + LD EK Y+
Sbjct: 2709 NGNMENSFSINHATGEIRSVRPLDREKVSHYV 2740
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 67/166 (40%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG + Y + N F++ P T E Q
Sbjct: 1329 RIGELVSSVTATDSDSGDNADLYYSITGTNNHGT--FSISPNTGSIFLAKKLDFETQSLY 1386
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G SST +V I V D ND P F SV E G +V V A D
Sbjct: 1387 KLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSVVENIPIGTSVISVTAHD 1446
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + Y++ + +P F +D G I TN +D E L+
Sbjct: 1447 PDADINGQLSYTIIQQMPRGNHFTIDEVKGTIYTNAEIDREFANLF 1492
Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 68/174 (39%), Gaps = 20/174 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G V+Y + + ++ LD
Sbjct: 694 YFAHIKENEPGGSYITTVSATDPDLGTNGTVKYSISAGDRSRFQVNAQSGVISTRMALDR 753
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V I V D D P F + Y F V E G VG
Sbjct: 754 EEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFENVALGYHVG 813
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A+ D N + Y D F ++ TG + T +D E+Q Y +V
Sbjct: 814 SVSASTMDLNSN-ISYLITTGDQKGMFAINQVTGQLTTANVIDREEQSFYQLKV 866
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N + Y + +
Sbjct: 1515 VTILVTDLNDNVPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEIEYEIINGDTDT 1574
Query: 146 FVVDANTGDIRTNKAL 161
F+VD +GD+R AL
Sbjct: 1575 FIVDRYSGDLRVASAL 1590
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 55/123 (44%), Gaps = 5/123 (4%)
Query: 59 DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
++ S++NL H P +STA V+I + D+ND P F S P +PE
Sbjct: 2009 ESQSFYNL-VVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLS-PKLTYIPENTPID 2066
Query: 118 LAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
V + ATD D G N+ + Y++ P F + G++R LD E+ Y V
Sbjct: 2067 TVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2126
Query: 176 ISK 178
K
Sbjct: 2127 TDK 2129
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNAVVYYSV 140
SS A++ I V DIND P F Y ++ E G V + ATD D G NA + YS+
Sbjct: 456 SSVASLVIFVNDINDHPPVFSQQVYRVNLSEEAPPGSYVSGISATDGDSGLNANLRYSI 514
>gi|297482956|ref|XP_002693195.1| PREDICTED: protocadherin-16 [Bos taurus]
gi|296480033|tpg|DAA22148.1| TPA: dachsous 1 [Bos taurus]
Length = 3296
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 28/162 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGP- 75
G + +V A D D G G V Y L +F++DP + E Q
Sbjct: 487 GSFVARVTARDPDQGTNGQVTYSLAPGAH--TRWFSIDPTSGIVTTAALLDYELEPQPQL 544
Query: 76 --IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ +GGL SS+ATV++ + D+ND P+FQ Y S+PEG Q G +V ATDAD
Sbjct: 545 IVVATDGGLPPLSSSATVSVVLQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDAD 604
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEK 165
G ++ YS+ + PF +DA++GD+ T + LD ++
Sbjct: 605 SGPFGLLSYSLGAGLGTSGSPPFRIDAHSGDVCTTRTLDRDQ 646
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 22/161 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT--DAASYFNLDPAT--- 70
SL ++A ++ G + + A D D+G FG + Y LL+ + F L+ +T
Sbjct: 2707 SLLSTSLAENQPP-GTLVTTLHAIDGDAGAFGRLHYSLLEAGPGPEGREAFALNSSTGEL 2765
Query: 71 --------EHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
EH G Q D G LS++ TV++ VT ++ +P F + + F VPEG +
Sbjct: 2766 RARVAFDYEHTGSFQLLVGATDAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQVPEGAR 2825
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDI 155
G ++G V ATD D G + +V YS+ P F ++ TG +
Sbjct: 2826 RGHSLGHVQATDEDGGADGLVLYSLAASSPYFGINQTTGAL 2866
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 79/178 (44%), Gaps = 30/178 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + R+ G +L+ ++ATD D G G V Y + F+LDP T
Sbjct: 1652 YSVLLRENSPPGTSLLTLQATDPDLGANGQVTYGGISGEN-----FSLDPDTGVLTTLRA 1706
Query: 71 ---EHQGPIQ-----DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
E Q I +GG L + TV + V D ND P F S VPEGQD
Sbjct: 1707 LDREEQEEINLTVYARDGGSPPLLTHVTVRVAVEDENDHAPTFGSAHLSLEVPEGQDPQT 1766
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQ---QLYLE 171
+ + A+D D G N + Y + + P FV+D +G+ T + LD E + QL +E
Sbjct: 1767 LTTLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQLQIE 1824
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 73/162 (45%), Gaps = 28/162 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQ 73
+G L+ V+A+D D G GLV + L ++ D F LD ++ HQ
Sbjct: 2615 VGAELLHVEASDADPGPHGLVRFTL--SSGDPLGLFELDESSGDLRLARPLDCETQARHQ 2672
Query: 74 GPIQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
+Q G + A V I V D+ND P F S+ E Q G V +HA D D
Sbjct: 2673 LVVQAADPAGAHFALAPVTIEVQDVNDHGPAFPLSLLSTSLAENQPPGTLVTTLHAIDGD 2732
Query: 130 EGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYE 164
G ++YS+ E P F ++++TG++R A DYE
Sbjct: 2733 AGAFGRLHYSLLEAGPGPEGREAFALNSSTGELRARVAFDYE 2774
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 20/158 (12%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL---------------DPATEHQGPI 76
TL ++A+D D G G ++YR+LD + A +L +PA + Q
Sbjct: 1766 TLTTLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQLQIEA 1825
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQN 133
+D G LS+T V + V D ND P F Y VPE G + ++ A D D G N
Sbjct: 1826 RDGGQPALSATLLVTVTVLDANDHAPAFPVPSYSVEVPEDAPAGTLLLQLQAHDPDAGAN 1885
Query: 134 AVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
V Y + F+++ ++G++RT LD E+ Y
Sbjct: 1886 GRVTYYLGTGAAGAFLLEPSSGELRTATTLDREQCPSY 1923
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 63/143 (44%), Gaps = 20/143 (13%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-NTDAASYFNLDPAT------ 70
FY A + + G +QV ATD DSG FGL+ Y L T + F +D +
Sbjct: 580 FYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGTSGSPPFRIDAHSGDVCTT 639
Query: 71 ----EHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDG 117
QGP D GGL S V + V+D ND P+F Y S+ + G
Sbjct: 640 RTLDRDQGPSSFDFTVTAVDGGGLKSMVYVKVFVSDENDNPPQFYPREYAASLSAQSAPG 699
Query: 118 LAVGRVHATDADEGQNAVVYYSV 140
AV RV A D D+G + + Y +
Sbjct: 700 TAVLRVRAHDPDQGPHGRLSYHI 722
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 68/158 (43%), Gaps = 30/158 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPI--- 76
G L+Q++A D D+G G V Y L T AA F L+P++ Q P
Sbjct: 1869 GTLLLQLQAHDPDAGANGRVTYYL---GTGAAGAFLLEPSSGELRTATTLDREQCPSYAF 1925
Query: 77 -------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-----GQDGLAVGRVH 124
G LS+T V I V D+ND P F + P +P L + +
Sbjct: 1926 TVNAVDSAAAGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGPVFSTPVLPLATLR 1985
Query: 125 ATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKA 160
A D D G NA + Y + P VD+ TG+IR +++
Sbjct: 1986 AEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVSRS 2023
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A +++ + DIND P F Y +V E G V +V+A+DAD G N V Y +
Sbjct: 237 ALLDVTLLDINDHAPAFNQSRYHAAVSESLAPGSPVLQVYASDADAGANGAVTYEINRRQ 296
Query: 143 ---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D PF +DA+TG +R + LD+E+++++
Sbjct: 297 SEGDGPFSIDAHTGLLRLERPLDFEQRRVH 326
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY 138
G ++TATV I + + ND +P P +V E Q G +VGRV ATD D G N + Y
Sbjct: 1081 GQQTATATVRISILNQNDHSPRLSEEPTFLAVAENQPPGTSVGRVFATDRDSGINGRLTY 1140
Query: 139 SVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
S+ + F + TG++ T + LD E+Q Y
Sbjct: 1141 SLRQLSEDSKAFRIHPQTGEVTTLQTLDRERQNSY 1175
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 70/163 (42%), Gaps = 23/163 (14%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------- 77
+ H G T + V A D D G+ V YRL A F L P+T ++
Sbjct: 1554 EDHPPGPTALHVVARDPDLGEAARVSYRL---AAGADGCFRLHPSTGALSVVRSLDREQR 1610
Query: 78 ----------DEGGLSSTAT--VNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVH 124
D G +AT + + V D+ND+ P FQ Y + E G ++ +
Sbjct: 1611 AEYVLTVVASDHGSPPRSATQLLTVSVADVNDEAPAFQQQEYSVLLRENSPPGTSLLTLQ 1670
Query: 125 ATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQ 167
ATD D G N V Y F +D +TG + T +ALD E+Q+
Sbjct: 1671 ATDPDLGANGQVTYGGISGENFSLDPDTGVLTTLRALDREEQE 1713
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
SS V + V D+ND P F Y +VPE G + V A+DAD G + +V +++
Sbjct: 2581 SSAVPVTVSVLDVNDNPPVFTRAAYRVAVPEDTPVGAELLHVEASDADPGPHGLVRFTLS 2640
Query: 142 EDIP---FVVDANTGDIRTNKALDYEKQQLY 169
P F +D ++GD+R + LD E Q +
Sbjct: 2641 SGDPLGLFELDESSGDLRLARPLDCETQARH 2671
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 33/171 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G ++ +V ATD+DSG G + Y L + D+ + F + P T E Q
Sbjct: 1119 GTSVGRVFATDRDSGINGRLTYSLRQLSEDSKA-FRIHPQTGEVTTLQTLDRERQNSYQL 1177
Query: 76 ---IQDEGG--LSSTATVNIRVTDINDKNPEF--------QSLPYEFSVPEG-QDGLAVG 121
+QD G S+T TV+I V D+ND +P F LP + VP+G G V
Sbjct: 1178 LVQVQDAGSPPRSTTGTVHIAVLDLNDNSPTFLQASGAAGGGLPIQ--VPDGVPPGTLVT 1235
Query: 122 RVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ A D DEG+N + Y + P F + ++G++ T L ++ Y+
Sbjct: 1236 TLQAKDPDEGENGTILYMLTGPGSELFSLHPHSGELLTAAPLIRAERPHYV 1286
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 76/179 (42%), Gaps = 32/179 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG---- 74
Y A + G +++V+A D D G G + Y +L N+ F LD EH G
Sbjct: 688 YAASLSAQSAPGTAVLRVRAHDPDQGPHGRLSYHILAGNS--PPLFALD---EHSGLLTV 742
Query: 75 --PI--------------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D GGL + A VNI + P F+ L Y FSVPE
Sbjct: 743 AWPLARRASSMVQLEIGARDGGGLQAEPNARVNISIVPGTPVPPVFEQLQYVFSVPEDVA 802
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
G +VG V A + G+ V ++ P F +D TG ++T + LD E LE
Sbjct: 803 PGTSVGVVQAHNP-PGRLGPVTLALSGGDPRGLFSLDGATGLLQTLRPLDRELLGPVLE 860
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 66/147 (44%), Gaps = 28/147 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------- 68
Y M + G ++ V ATD+DSG G V Y L +A F++DP
Sbjct: 2378 LYQVMLLEHTPPGSAILSVSATDRDSGANGHVSYHL----ASSAEGFSIDPNNGTLFTTV 2433
Query: 69 ---ATEHQGP--------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG- 114
A H+GP +D G ++ ATV++++ D ND P F Y +V E
Sbjct: 2434 GTVALGHEGPGMVDVVLEARDHGVPVRAARATVHVQLQDQNDHAPSFTLPHYRVAVTEDL 2493
Query: 115 QDGLAVGRVHATDADEGQ-NAVVYYSV 140
G + + ATDAD + +A V YS+
Sbjct: 2494 PPGSTLLTLEATDADGSRSHAAVDYSI 2520
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 71/180 (39%), Gaps = 39/180 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + L L+QV+A D D G G + Y L + A F++DP
Sbjct: 2174 YVAFLPESRPLEGPLLQVEADDLDQGPSGQISYSLAASQP-ARGLFHVDPATGTITTTAI 2232
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
AT+ P L +AT+ + V D ND P P+E V E
Sbjct: 2233 LDREIWAETRLVLMATDRGSP-----ALVGSATLTVMVIDTNDNRPTIPQ-PWELRVSED 2286
Query: 114 GQDGLAVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + +V D D G V++Y S P+D PF V G + LD+E++ Y
Sbjct: 2287 ALLGSEIAQVTGNDVDSGP--VLWYVLSPSGPQD-PFSVGRYGGRLSLTGPLDFEQRDRY 2343
Score = 42.4 bits (98), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 69/173 (39%), Gaps = 31/173 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH----------------- 72
G + ++A D DSG V + LL F +DP T H
Sbjct: 908 GTLIYTLRALDPDSGVNSRVTFTLLAGG---GGTFTVDPTTGHIRLMGPLGPPGGPAHEL 964
Query: 73 QGPIQDEGGLSSTATVNIRVT--DINDKN--PEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
+ +D G T+ +RV D+ + P F S Y +P G G V +V A
Sbjct: 965 ELEARDGGSPPRTSHFRLRVVVQDLGTRGLAPHFDSPTYRVDLPSGTTPGTQVLQVQARA 1024
Query: 128 ADEGQNAVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D + V Y + D PF ++ +G + ALD+E Q+LY +V +S
Sbjct: 1025 PD---GSPVTYHLAADGPGSPFGLEPQSGWLWVRAALDHEAQELYTLKVMAVS 1074
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 44/93 (47%), Gaps = 15/93 (16%)
Query: 82 LSSTATVNIRVTDINDKNPEF-------QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
L + A + VTD+ND P F + LP E ++P G V RV A D D+G N
Sbjct: 450 LRAEAAFVLHVTDVNDNAPAFDRQLYRPEPLP-EVALP----GSFVARVTARDPDQGTNG 504
Query: 135 VVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
V YS+ F +D +G + T LDYE
Sbjct: 505 QVTYSLAPGAHTRWFSIDPTSGIVTTAALLDYE 537
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD-EGQNAVVYYSVPEDIP 145
V +RV D N+ P F P ++PE + G + A+DAD G N+ V Y + P
Sbjct: 1420 VQVRVQDENEHAPAFARDPLALALPENPEPGATLYTFRASDADGPGPNSDVRYRLLRQEP 1479
Query: 146 FV----VDANTGDIRTNKALDYEKQQLYL 170
V +DA TG + + LD E L
Sbjct: 1480 PVPALRLDARTGALSAPRGLDRETTPALL 1508
>gi|386767716|ref|NP_001246258.1| starry night, isoform E [Drosophila melanogaster]
gi|383302402|gb|AFH08012.1| starry night, isoform E [Drosophila melanogaster]
Length = 3578
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------- 68
S Y A + +G +++QV A+D D G G ++Y L D + + S F +DP
Sbjct: 1009 SPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGS-FVIDPTSGTIRT 1067
Query: 69 ---------ATEHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
A H I + G LSST V IR+ D+ND P F S VPE
Sbjct: 1068 NKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSP 1127
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV 140
G VG +HA D DEG NAVV+YS+
Sbjct: 1128 VGSVVGEIHAHDPDEGVNAVVHYSI 1152
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 83/178 (46%), Gaps = 27/178 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPATEH--- 72
Y A + +G T++ V ATD D G + Y L + N + F+++P T
Sbjct: 902 YSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVT 961
Query: 73 QGPIQDE-------------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
P+ E GG LS T V I VTD+ND P F+S Y+ S+ E
Sbjct: 962 NAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDAL 1021
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G +V +V A+D D G N + Y + ED FV+D +G IRTNK LD E ++
Sbjct: 1022 VGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVF 1079
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 83/191 (43%), Gaps = 44/191 (23%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--------FNLDPAT 70
+ A R+ +G T++ ++ATD+D GK +EY + + TD A F +D
Sbjct: 469 FEASIREGATVGSTVITLRATDQDIGKNAEIEYGI-EAVTDGAGLAQDQEMPIFRID--- 524
Query: 71 EHQGPIQDEGGL-------------------------SSTATVNIRVTDINDKNPEFQSL 105
G I L ++TA+V ++V D ND P+F
Sbjct: 525 SRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSER 584
Query: 106 PYEFSVPEGQDG----LAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTN 158
Y VPE Q G V + ATDAD+G NA + Y++ F +D+ +GD+
Sbjct: 585 TYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLV 644
Query: 159 KALDYEKQQLY 169
K LDYE + Y
Sbjct: 645 KPLDYESVRSY 655
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 55/102 (53%), Gaps = 9/102 (8%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG S TATV+I +TD N+ P F++ PY SV E G V V ATD+D G NA +
Sbjct: 873 DSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQI 932
Query: 137 YYSVPEDI--------PFVVDANTGDIRTNKALDYEKQQLYL 170
YS+ E+ PF ++ TG I TN LD E YL
Sbjct: 933 TYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYL 974
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 25/158 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------- 76
T+ ++ATD D G + Y ++ NT S F++D + +
Sbjct: 602 TVAHIRATDADQGNNAAIRYAIIGGNTQ--SQFSIDSMSGDVSLVKPLDYESVRSYRLVI 659
Query: 77 --QDEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
QD G S + T + V D ND P F + ++ SV E G + RV A D+DEG
Sbjct: 660 RAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEG 719
Query: 132 QNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQ 166
NA + YS+ E + P VD TG ++T K LD E+Q
Sbjct: 720 ANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQ 757
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
S T T+ + V D ND +P F++ +E S+ EG G V + ATD D G+NA + Y +
Sbjct: 445 SGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIE 504
Query: 142 -----------EDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+++P F +D+ +G I T +LD E Y
Sbjct: 505 AVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSY 544
Score = 43.1 bits (100), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 29/167 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP-- 75
+G +++V+A D D G + Y + + + + +DP T E QG
Sbjct: 704 VGYNIIRVQAYDSDEGANAEITYSISERDDNFP--LAVDPRTGWVQTIKPLDREEQGRFA 761
Query: 76 ---IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDA 128
+ +GG+ S++++V I V D+ND +P F YE +V E Q G V V ATD
Sbjct: 762 FQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDP 821
Query: 129 DEGQNAVVYYSVPEDIP---FVVDANTGD--IRTNKALDYEKQQLYL 170
DE ++ ++Y + F + + G I ++LDY++++ +L
Sbjct: 822 DE--DSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFL 866
>gi|355749557|gb|EHH53956.1| hypothetical protein EGM_14676 [Macaca fascicularis]
Length = 4981
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 83/170 (48%), Gaps = 22/170 (12%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL++Y + N + A + +
Sbjct: 3096 ATIPESHSVGSIVRTVSARDRDAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYE 3155
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
+H+ I D G ++ T +V + V D+ND +P F S Y +V E G V
Sbjct: 3156 LCQKHEMTISAIDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIH 3215
Query: 123 VHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y+V D+ FV+D NTG I T LD+E +Q Y
Sbjct: 3216 LNATDADSGTNAVIAYTVQSSDSDL-FVIDPNTGVITTQGFLDFETKQSY 3264
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F +DP + E +
Sbjct: 1756 GSKIMQLTAMDADEGANALVTYTIISGADDS---FRIDPESGDLIATRRLDRERRSKYSL 1812
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQ 132
D+G SS +NI V+D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1813 LVRADDGLQSSDMRINITVSDVNDHTPKFSRPVYSFDIPEDTIPGSLVAAILATDDDSGV 1872
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG + LDYE QQ Y+ V
Sbjct: 1873 NGEITYIVNEDDEDGIFFLNPITGVFNLTRVLDYEVQQYYILTV 1916
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 24/162 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V A DKDSG G ++Y +++ N + + FN++ AT ++
Sbjct: 2687 ILTVSAVDKDSGPNGQLDYEIVNGNMENS--FNINHATGEIRSVRPLDREKVSYYVLTIK 2744
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G S + +V I + D ND P F + + VPE G V RV +D D G
Sbjct: 2745 SSDKGSPSQSTSVKVMINILDENDNAPRFSQI-FSAHVPENSPLGYTVTRVTTSDEDIGI 2803
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA+ YS+ + +PF ++ +TGDI ++ L+ E Y RV
Sbjct: 2804 NAISRYSIMDTSLPFTINPSTGDIVISRPLNREDTDRYRIRV 2845
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 75/173 (43%), Gaps = 21/173 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-----------AASYFNL 66
FY A + +++V A+D D G GL+ Y ++ N + A L
Sbjct: 1214 FYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEERQFAIDITSGQVALIGKL 1273
Query: 67 D----PATEHQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
D PA D G L+ST T+NI + D ND P F V E + G
Sbjct: 1274 DYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGEL 1333
Query: 120 VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD+D G NA +YYS+ F + NTG I K LD+E Q LY
Sbjct: 1334 VSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGSIFLAKKLDFETQSLY 1386
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 74/162 (45%), Gaps = 23/162 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI----QDEGGL--- 82
G L+ ++ATD D G G V + L + TD S F LDP + I ++E
Sbjct: 599 GTELLMLRATDGDLGDNGTVRFSLQEAETDRRS-FRLDPVSGRLSTISSLDREEQAFYSL 657
Query: 83 ------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
SS +N+ + DIND +P F + Y + E + G + + V ATD D
Sbjct: 658 LVLATDLGSPPQSSMTRINVSLLDINDNSPVFYPVQYFAHIKENEPGGSYITTVSATDPD 717
Query: 130 EGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V YS+ + F V+ +G I T ALD E++ Y
Sbjct: 718 LGTNGTVKYSISAGDRSRFQVNVQSGVISTRMALDREEKTAY 759
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 22/168 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y ++D + F ++P+T
Sbjct: 2774 SQIFSAHVPENSPLGYTVTRVTTSDEDIGINAISRYSIMDTSLP----FTINPSTGDIVI 2829
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V I VTD+ND P F Y PE + G
Sbjct: 2830 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPELTEIGS 2889
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
V +V ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 2890 KVTQVFATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQILKYQN 2937
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 74/155 (47%), Gaps = 18/155 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPIQD--- 78
T++QV A D D G + Y L N D A + LD T+ Q +
Sbjct: 2278 TILQVVARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELGVTQSLDRETKEQFVLMITAV 2337
Query: 79 EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNA 134
+GG L+ T T+N+ V D+ND P F S Y ++PE G V V+A+DAD NA
Sbjct: 2338 DGGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIPEDAPTGTDVLLVNASDADASTNA 2397
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
VV + + F ++ +TG I T+ LD E + Y
Sbjct: 2398 VVRI-IGGNSQFTINPSTGQIITSALLDRETKDNY 2431
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 70/163 (42%), Gaps = 33/163 (20%)
Query: 38 ATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGGLSSTAT--- 87
ATD D G G+ YR++ N A F LD G + +GGL T
Sbjct: 159 ATDSDIGSNGVDHRSYRIIRGN--EAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQY 216
Query: 88 -------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
VN+ V DIND P F S Y+ VPE G +V +V A D
Sbjct: 217 QLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAAD 276
Query: 128 ADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ADEG N + Y + E PF +D TG I + LD+E ++ Y
Sbjct: 277 ADEGTNXXIRYRLQDEGTPFQMDPETGLITVREPLDFEARRQY 319
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +A+D DSG +EY LL+ + S +D G + D
Sbjct: 2069 VFKAQASDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATD 2128
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y+ + E G + +V A D DEG N
Sbjct: 2129 KGQPSLSSSTEVIVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQ 2188
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y + + F +D+ TG I K LD EK Y
Sbjct: 2189 VRYGIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTY 2225
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 76/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3210 GTTVIHLNATDADSGTNAVIAYTVQSSDSD---LFVIDPNT---GVITTQGFLDFETKQS 3263
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S ATVN+++ N+ P F S Y F + E G VG V A+
Sbjct: 3264 YHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFAS 3323
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F ++ TG I + LD EK+ ERV L
Sbjct: 3324 DRDLGTDGEVHYLIFGNSRKKGFQINKKTGQIYVSGILDREKE----ERVSL 3371
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 71/168 (42%), Gaps = 18/168 (10%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF---NLDPAT 70
D L Y + + +V+A+DKDSG G + Y + + NT DA F L +
Sbjct: 997 DQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGNTGDAFGIFPDGQLYIKS 1056
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E +QD LS+T V + + D+ND P F S Y F E Q G
Sbjct: 1057 ELDRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAG 1116
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
VG+V A D D G N V YS P F + +G+I D E
Sbjct: 1117 SFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHTISGEITNTYQFDRE 1164
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L ATV++ + DIND P+F Y+ ++ E L V RV A+D DEG N +++YS+
Sbjct: 1190 LKDQATVHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSI 1249
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E+ F +D +G + LDYE Y
Sbjct: 1250 IKGNEERQFAIDITSGQVALIGKLDYEATPAY 1281
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 77/162 (47%), Gaps = 22/162 (13%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQG-- 74
++G L++V A D KD G VEY + LDN+T S + + +Q
Sbjct: 2997 KVGTKLIKVIAIDDKDFGLNSEVEYFISNDNHLGKFKLDNDTGWISVASSLISDLNQNFC 3056
Query: 75 ---PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D+G LSS ATV I VT+ N PEF ++PE G V V A D
Sbjct: 3057 ITVTAKDKGNPPLSSQATVEITVTEENYHTPEFSQNHMSATIPESHSVGSIVRTVSARDR 3116
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQ 167
D N ++ YS+ E+ F ++++TG + KALDYE Q
Sbjct: 3117 DAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYELCQ 3158
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 27/165 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGPI--- 76
G ++QV A D D G G V Y +++ NT+ F +D P + P
Sbjct: 2170 GTDIIQVFAADGDEGTNGQVRYGIVNGNTNQE--FRIDSVTGAITVAKPLDREKTPTYHL 2227
Query: 77 ----QDEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDA 128
D G + T+TV+I + DIND P F+ PY +VPE L + +V A D
Sbjct: 2228 TVQAADRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPENLRTLPRTILQVVARDD 2287
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D+G N+ + Y + ED F + A +G++ ++LD E ++ ++
Sbjct: 2288 DQGSNSKLSYVLFGGNEDNAFTLSA-SGELGVTQSLDRETKEQFV 2331
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 71/174 (40%), Gaps = 32/174 (18%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGG--- 81
+ + G ++ Q KA D D G G+V Y L N + + + GP+ + G
Sbjct: 904 ENWQAGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINGKNGTISLLGPLDVQAGSYQ 963
Query: 82 ------------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
LSS+ + + V D+ND +P F L YE ++ E + +V A+D
Sbjct: 964 IEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDK 1023
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYLERV 173
D G N + Y++ E NTGD + LD E Q Y+ V
Sbjct: 1024 DSGANGEIAYTIAE-------GNTGDAFGIFPDGQLYIKSELDRELQDRYVLMV 1070
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1724 AEVEITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTYTIISGA 1783
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ + LD E++ Y
Sbjct: 1784 DDSFRIDPESGDLIATRRLDRERRSKY 1810
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LSS+ +V + VTD+ND P FQ PY +P G V V TDAD G N+ ++YS+
Sbjct: 2446 LSSSTSVLVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSFVFAVTVTDADIGPNSELHYSL 2505
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 70/164 (42%), Gaps = 35/164 (21%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD--EGGLS---------- 83
+ ATD DSG + Y ++ N +F++ +EH G + GGL
Sbjct: 497 ISATDGDSGLNANLRYSIVSGN--GLGWFHI---SEHSGLVTTGAAGGLDRELASQIVLN 551
Query: 84 ------------STATVNIRVTDINDKNPEF-QSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
S A + + + D+ND+ P F Q Y+ SV E G + + ATD D
Sbjct: 552 ISARDQGVHPKVSYAQLVVTLLDVNDEKPRFSQPEGYDVSVVENAPTGTELLMLRATDGD 611
Query: 130 EGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V +S+ E F +D +G + T +LD E+Q Y
Sbjct: 612 LGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFY 655
Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
G ++ VNI V D+ND +P F Q++ V Q G ++ + A D DEG N +V Y
Sbjct: 871 GTVTGDTMVNITVKDLNDNSPHFLQAIESVDVVENWQAGHSIFQAKAVDPDEGVNGMVLY 930
Query: 139 SV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
S+ P+++ F ++ G I LD + +E
Sbjct: 931 SLKQNPKNL-FAINGKNGTISLLGPLDVQAGSYQIE 965
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
SS ++I V D+ND P F+ P+ + E + V A D D G N + Y +
Sbjct: 2649 FSSYEKLDITVLDVNDNAPVFKEDPFVSEILENLSPRKILTVSAVDKDSGPNGQLDYEIV 2708
Query: 142 E---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ F ++ TG+IR+ + LD EK Y+
Sbjct: 2709 NGNMENSFNINHATGEIRSVRPLDREKVSYYV 2740
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N V Y + +
Sbjct: 1515 VTILVTDLNDNVPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEVEYEIINGDTDT 1574
Query: 146 FVVDANTGDIRTNKAL 161
F+VD +GD+R AL
Sbjct: 1575 FIVDRYSGDLRVASAL 1590
Score = 39.7 bits (91), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG + Y + N F++ P T E Q
Sbjct: 1329 RIGELVSSVTATDSDSGDNADLYYSITGTNNHGT--FSISPNTGSIFLAKKLDFETQSLY 1386
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G SST +V I V D ND P F S+ E G +V V A D
Sbjct: 1387 KLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVTAHD 1446
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + Y++ + +P F +D G I TN +D E L+
Sbjct: 1447 PDADINGQLSYTIIQQMPRGNHFTIDEVKGTIYTNAEIDREFANLF 1492
Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 68/174 (39%), Gaps = 20/174 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G V+Y + + ++ LD
Sbjct: 694 YFAHIKENEPGGSYITTVSATDPDLGTNGTVKYSISAGDRSRFQVNVQSGVISTRMALDR 753
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V I V D D P F + Y F V E G VG
Sbjct: 754 EEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFGQVAYSFVVFENVALGYHVG 813
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A+ D N + Y D F ++ TG + T +D E+Q Y +V
Sbjct: 814 SVSASTMDLNSN-ISYLITTGDQKGMFAINQVTGQLTTANVIDREEQSFYQLKV 866
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 5/123 (4%)
Query: 59 DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
++ S++NL H P +STA V+I + D+ND P F S P +PE
Sbjct: 2009 ESQSFYNL-VVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLS-PKLTYIPENTPID 2066
Query: 118 LAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
V + A+D D G N+ + Y++ P F + G++R LD E+ Y V
Sbjct: 2067 TVVFKAQASDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2126
Query: 176 ISK 178
K
Sbjct: 2127 TDK 2129
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNAVVYYSV 140
SS A++ I V DIND P F Y ++ E G V + ATD D G NA + YS+
Sbjct: 456 SSVASLVIFVNDINDHPPVFSQQVYRVNLSEEAPPGSYVSGISATDGDSGLNANLRYSI 514
>gi|338713196|ref|XP_001918099.2| PREDICTED: protocadherin alpha-C2-like isoform 1 [Equus caballus]
Length = 686
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 74/151 (49%), Gaps = 21/151 (13%)
Query: 34 MQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--DEGGLSSTATVNIR 91
+ VK D+ + GLV + LD + A EH + DEG T TV +
Sbjct: 180 LDVKTNSDDNTQIGLVLRKSLDR----------EEAPEHNLFLTATDEGKPELTGTVQLL 229
Query: 92 VT--DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP--- 145
VT D+ND P F+ YE + E D G V R++A+D DEG NA + YS +P
Sbjct: 230 VTVLDVNDNAPSFEQSEYEVRIFENSDNGTIVIRLNASDRDEGANAEISYSFHSLVPPMV 289
Query: 146 ---FVVDANTGDIRTNKALDYEKQQLYLERV 173
F +D+NTG+I K LD+EK Y R+
Sbjct: 290 IDQFSIDSNTGEITIRKNLDFEKVNSYKIRI 320
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 72/172 (41%), Gaps = 36/172 (20%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRL-------------------LDNNTDAASYFNLDP 68
+ G + + +D DSG G V L LD+ D S N D
Sbjct: 364 KFGTVIALISVSDLDSGANGQVTCSLTPHVPFKLVSTFKNYYSLVLDSTLDRESVANYDV 423
Query: 69 ATEHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVH 124
+ +GG LS+TA+V++ V D+ND P F Y V E G + V
Sbjct: 424 VVTAR-----DGGSPSLSATASVSVEVADVNDNAPAFPQPEYTVFVKENNPPGSHIFTVS 478
Query: 125 ATDADEGQNAVVYYSVPED-------IPFV-VDANTGDIRTNKALDYEKQQL 168
A DAD +NA V YS+ E +V V A +G + + LD+E+ +L
Sbjct: 479 ARDADAQENARVSYSLVERRVGERALSSYVSVHAESGKVYALQPLDHEELEL 530
>gi|157123386|ref|XP_001660147.1| cadherin [Aedes aegypti]
Length = 3478
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 84/178 (47%), Gaps = 27/178 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPATEH--- 72
Y A + +G T++ V ATD D G + Y L D N + F+++P T
Sbjct: 905 YTASVFEDAPVGTTVLVVFATDSDVGVNAQITYLLNDESVNGLGSNEPFSINPQTGAIIT 964
Query: 73 QGPIQDE-------------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
P+ E GG LS T V I VTD+ND P+F+ Y+ ++ E
Sbjct: 965 NAPLDRETMSGYLLTVTAKDGGNPSLSDTTDVEISVTDVNDNAPQFKVPLYQATIAEDAL 1024
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G +V ++ ATD D G N + Y++ ED FVVD +G IRTNK LD E +Y
Sbjct: 1025 IGTSVVQIAATDIDMGLNGRIKYTLSSKDIEDGSFVVDPTSGVIRTNKGLDRESIAIY 1082
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 81/184 (44%), Gaps = 28/184 (15%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------- 68
Y A + +G +++Q+ ATD D G G ++Y L + + S F +DP
Sbjct: 1014 LYQATIAEDALIGTSVVQIAATDIDMGLNGRIKYTLSSKDIEDGS-FVVDPTSGVIRTNK 1072
Query: 69 -------ATEHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
A H I + G LSST V IR+ D+ND P F S VPE G
Sbjct: 1073 GLDRESIAIYHLEAIASDKGTPTLSSTVEVQIRLDDVNDSPPTFPSDKITLYVPENSPVG 1132
Query: 118 LAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIR----TNKALDYEKQQLYL 170
VG +HA D DEG NA+V+YS+ + F + G R T LDYE +
Sbjct: 1133 SVVGEIHAHDPDEGVNAIVHYSIIGGDDSNSFSLVTRPGSERAQLLTMTELDYESSKKRF 1192
Query: 171 ERVF 174
E V
Sbjct: 1193 ELVI 1196
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 41/187 (21%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY-------FNLDPATEHQ 73
A R+ +G T++ ++ATD+D GK +EY +L N D ++ F +D +
Sbjct: 475 ASIREGVSVGSTVITIRATDQDIGKNADIEYAILSINGDGSATNGQDEQAFRIDARS--- 531
Query: 74 GPIQDEGGL-------------------------SSTATVNIRVTDINDKNPEFQSLPYE 108
G I L S+TATV +++ D ND P+F Y
Sbjct: 532 GTISTRSALDRETSEMYKLIVSASDMATLQTERRSATATVIVKILDDNDNYPQFSERTYT 591
Query: 109 FSVPEGQ---DGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALD 162
V E Q + + + ATDAD+G NA + Y++ F +D+ +GD+ K LD
Sbjct: 592 VQVSEDQWTNENNVITHIQATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLVKPLD 651
Query: 163 YEKQQLY 169
YE + Y
Sbjct: 652 YESVRSY 658
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 25/160 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI---------------- 76
+ ++ATD D G + Y ++ NT S F++D + +
Sbjct: 606 ITHIQATDADQGNNAAIRYAIIGGNTQ--SQFSIDSMSGDVSLVKPLDYESVRSYRLVIR 663
Query: 77 -QDEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
QD G S + T + V D ND P F + ++ +V E G + RV A D+DEG
Sbjct: 664 AQDGGSPSRSNTTQLLVNVLDANDNAPRFYTSQFQEAVLESVPVGYNIVRVQAYDSDEGA 723
Query: 133 NAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
N+ + Y++ + ++P VD+ TG I T K LD E++ Y
Sbjct: 724 NSEISYNIQDRDDNLPLAVDSRTGWIHTTKPLDREERSRY 763
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D G + TA VNI +TD N+ P F++ PY SV E G V V ATD+D G NA +
Sbjct: 876 DSGQRTDTAIVNINITDANNFAPVFENAPYTASVFEDAPVGTTVLVVFATDSDVGVNAQI 935
Query: 137 YYSVPEDI--------PFVVDANTGDIRTNKALDYEKQQLYL 170
Y + ++ PF ++ TG I TN LD E YL
Sbjct: 936 TYLLNDESVNGLGSNEPFSINPQTGAIITNAPLDRETMSGYL 977
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 13/100 (13%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
S T T+ + V D ND P F+S + S+ EG G V + ATD D G+NA + Y++
Sbjct: 449 SGTTTLQVNVLDCNDHTPSFESEEFLASIREGVSVGSTVITIRATDQDIGKNADIEYAIL 508
Query: 141 -----------PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ F +DA +G I T ALD E ++Y
Sbjct: 509 SINGDGSATNGQDEQAFRIDARSGTISTRSALDRETSEMY 548
Score = 35.8 bits (81), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 18/120 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQ-GPIQDE-------- 79
+G +++V+A D D G + Y + D + + + H P+ E
Sbjct: 707 VGYNIVRVQAYDSDEGANSEISYNIQDRDDNLPLAVDSRTGWIHTTKPLDREERSRYSFQ 766
Query: 80 -----GGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADE 130
GG+ S++ +V + + D+ND +P F YE ++ E Q G V V ATD DE
Sbjct: 767 VIAMDGGIPPKSASTSVVVTIQDVNDNDPTFSPKYYEATIAEDQPPGTPVTTVTATDPDE 826
>gi|221330158|ref|NP_724962.3| starry night, isoform A [Drosophila melanogaster]
gi|320543771|ref|NP_001188903.1| starry night, isoform C [Drosophila melanogaster]
gi|226694203|sp|Q9V5N8.4|STAN_DROME RecName: Full=Protocadherin-like wing polarity protein stan; AltName:
Full=Protein flamingo; AltName: Full=Protein starry
night; Flags: Precursor
gi|220902172|gb|AAF58763.5| starry night, isoform A [Drosophila melanogaster]
gi|318068565|gb|ADV37150.1| starry night, isoform C [Drosophila melanogaster]
Length = 3579
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------- 68
S Y A + +G +++QV A+D D G G ++Y L D + + S F +DP
Sbjct: 1009 SPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGS-FVIDPTSGTIRT 1067
Query: 69 ---------ATEHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
A H I + G LSST V IR+ D+ND P F S VPE
Sbjct: 1068 NKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSP 1127
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV 140
G VG +HA D DEG NAVV+YS+
Sbjct: 1128 VGSVVGEIHAHDPDEGVNAVVHYSI 1152
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 83/178 (46%), Gaps = 27/178 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPATEH--- 72
Y A + +G T++ V ATD D G + Y L + N + F+++P T
Sbjct: 902 YSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVT 961
Query: 73 QGPIQDE-------------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
P+ E GG LS T V I VTD+ND P F+S Y+ S+ E
Sbjct: 962 NAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDAL 1021
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G +V +V A+D D G N + Y + ED FV+D +G IRTNK LD E ++
Sbjct: 1022 VGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVF 1079
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 83/191 (43%), Gaps = 44/191 (23%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--------FNLDPAT 70
+ A R+ +G T++ ++ATD+D GK +EY + + TD A F +D
Sbjct: 469 FEASIREGATVGSTVITLRATDQDIGKNAEIEYGI-EAVTDGAGLAQDQEMPIFRID--- 524
Query: 71 EHQGPIQDEGGL-------------------------SSTATVNIRVTDINDKNPEFQSL 105
G I L ++TA+V ++V D ND P+F
Sbjct: 525 SRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSER 584
Query: 106 PYEFSVPEGQDG----LAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTN 158
Y VPE Q G V + ATDAD+G NA + Y++ F +D+ +GD+
Sbjct: 585 TYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLV 644
Query: 159 KALDYEKQQLY 169
K LDYE + Y
Sbjct: 645 KPLDYESVRSY 655
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 55/102 (53%), Gaps = 9/102 (8%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG S TATV+I +TD N+ P F++ PY SV E G V V ATD+D G NA +
Sbjct: 873 DSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQI 932
Query: 137 YYSVPEDI--------PFVVDANTGDIRTNKALDYEKQQLYL 170
YS+ E+ PF ++ TG I TN LD E YL
Sbjct: 933 TYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYL 974
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 25/158 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------- 76
T+ ++ATD D G + Y ++ NT S F++D + +
Sbjct: 602 TVAHIRATDADQGNNAAIRYAIIGGNTQ--SQFSIDSMSGDVSLVKPLDYESVRSYRLVI 659
Query: 77 --QDEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
QD G S + T + V D ND P F + ++ SV E G + RV A D+DEG
Sbjct: 660 RAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEG 719
Query: 132 QNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQ 166
NA + YS+ E + P VD TG ++T K LD E+Q
Sbjct: 720 ANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQ 757
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
S T T+ + V D ND +P F++ +E S+ EG G V + ATD D G+NA + Y +
Sbjct: 445 SGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIE 504
Query: 142 -----------EDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+++P F +D+ +G I T +LD E Y
Sbjct: 505 AVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSY 544
Score = 43.1 bits (100), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 29/167 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP-- 75
+G +++V+A D D G + Y + + + + +DP T E QG
Sbjct: 704 VGYNIIRVQAYDSDEGANAEITYSISERDDNFP--LAVDPRTGWVQTIKPLDREEQGRFA 761
Query: 76 ---IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDA 128
+ +GG+ S++++V I V D+ND +P F YE +V E Q G V V ATD
Sbjct: 762 FQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDP 821
Query: 129 DEGQNAVVYYSVPEDIP---FVVDANTGD--IRTNKALDYEKQQLYL 170
DE ++ ++Y + F + + G I ++LDY++++ +L
Sbjct: 822 DE--DSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFL 866
>gi|403182344|gb|EAT48765.2| AAEL000246-PA [Aedes aegypti]
Length = 3468
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 84/178 (47%), Gaps = 27/178 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPATEH--- 72
Y A + +G T++ V ATD D G + Y L D N + F+++P T
Sbjct: 905 YTASVFEDAPVGTTVLVVFATDSDVGVNAQITYLLNDESVNGLGSNEPFSINPQTGAIIT 964
Query: 73 QGPIQDE-------------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
P+ E GG LS T V I VTD+ND P+F+ Y+ ++ E
Sbjct: 965 NAPLDRETMSGYLLTVTAKDGGNPSLSDTTDVEISVTDVNDNAPQFKVPLYQATIAEDAL 1024
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G +V ++ ATD D G N + Y++ ED FVVD +G IRTNK LD E +Y
Sbjct: 1025 IGTSVVQIAATDIDMGLNGRIKYTLSSKDIEDGSFVVDPTSGVIRTNKGLDRESIAIY 1082
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 81/184 (44%), Gaps = 28/184 (15%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------- 68
Y A + +G +++Q+ ATD D G G ++Y L + + S F +DP
Sbjct: 1014 LYQATIAEDALIGTSVVQIAATDIDMGLNGRIKYTLSSKDIEDGS-FVVDPTSGVIRTNK 1072
Query: 69 -------ATEHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
A H I + G LSST V IR+ D+ND P F S VPE G
Sbjct: 1073 GLDRESIAIYHLEAIASDKGTPTLSSTVEVQIRLDDVNDSPPTFPSDKITLYVPENSPVG 1132
Query: 118 LAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIR----TNKALDYEKQQLYL 170
VG +HA D DEG NA+V+YS+ + F + G R T LDYE +
Sbjct: 1133 SVVGEIHAHDPDEGVNAIVHYSIIGGDDSNSFSLVTRPGSERAQLLTMTELDYESSKKRF 1192
Query: 171 ERVF 174
E V
Sbjct: 1193 ELVI 1196
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 41/187 (21%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY-------FNLDPATEHQ 73
A R+ +G T++ ++ATD+D GK +EY +L N D ++ F +D +
Sbjct: 475 ASIREGVSVGSTVITIRATDQDIGKNADIEYAILSINGDGSATNGQDEQAFRIDARS--- 531
Query: 74 GPIQDEGGL-------------------------SSTATVNIRVTDINDKNPEFQSLPYE 108
G I L S+TATV +++ D ND P+F Y
Sbjct: 532 GTISTRSALDRETSEMYKLIVSASDMATLQTERRSATATVIVKILDDNDNYPQFSERTYT 591
Query: 109 FSVPEGQ---DGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALD 162
V E Q + + + ATDAD+G NA + Y++ F +D+ +GD+ K LD
Sbjct: 592 VQVSEDQWTNENNVITHIQATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLVKPLD 651
Query: 163 YEKQQLY 169
YE + Y
Sbjct: 652 YESVRSY 658
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 25/160 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI---------------- 76
+ ++ATD D G + Y ++ NT S F++D + +
Sbjct: 606 ITHIQATDADQGNNAAIRYAIIGGNTQ--SQFSIDSMSGDVSLVKPLDYESVRSYRLVIR 663
Query: 77 -QDEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
QD G S + T + V D ND P F + ++ +V E G + RV A D+DEG
Sbjct: 664 AQDGGSPSRSNTTQLLVNVLDANDNAPRFYTSQFQEAVLESVPVGYNIVRVQAYDSDEGA 723
Query: 133 NAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
N+ + Y++ + ++P VD+ TG I T K LD E++ Y
Sbjct: 724 NSEISYNIQDRDDNLPLAVDSRTGWIHTTKPLDREERSRY 763
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D G + TA VNI +TD N+ P F++ PY SV E G V V ATD+D G NA +
Sbjct: 876 DSGQRTDTAIVNINITDANNFAPVFENAPYTASVFEDAPVGTTVLVVFATDSDVGVNAQI 935
Query: 137 YYSVPEDI--------PFVVDANTGDIRTNKALDYEKQQLYL 170
Y + ++ PF ++ TG I TN LD E YL
Sbjct: 936 TYLLNDESVNGLGSNEPFSINPQTGAIITNAPLDRETMSGYL 977
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 13/100 (13%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
S T T+ + V D ND P F+S + S+ EG G V + ATD D G+NA + Y++
Sbjct: 449 SGTTTLQVNVLDCNDHTPSFESEEFLASIREGVSVGSTVITIRATDQDIGKNADIEYAIL 508
Query: 141 -----------PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ F +DA +G I T ALD E ++Y
Sbjct: 509 SINGDGSATNGQDEQAFRIDARSGTISTRSALDRETSEMY 548
Score = 35.8 bits (81), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 18/120 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQ-GPIQDE-------- 79
+G +++V+A D D G + Y + D + + + H P+ E
Sbjct: 707 VGYNIVRVQAYDSDEGANSEISYNIQDRDDNLPLAVDSRTGWIHTTKPLDREERSRYSFQ 766
Query: 80 -----GGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADE 130
GG+ S++ +V + + D+ND +P F YE ++ E Q G V V ATD DE
Sbjct: 767 VIAMDGGIPPKSASTSVVVTIQDVNDNDPTFSPKYYEATIAEDQPPGTPVTTVTATDPDE 826
>gi|296489410|tpg|DAA31523.1| TPA: cadherin, EGF LAG seven-pass G-type receptor 2 [Bos taurus]
Length = 2920
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 85/181 (46%), Gaps = 26/181 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS-YFNLDPAT---EHQG 74
Y R+ E+G ++ V+ATD D+ + YRLL+ + + S F +DP + +G
Sbjct: 291 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEESGGSPSEVFEIDPRSGVIRTRG 350
Query: 75 PI------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D G ++TA + + V D ND P+F Y V E
Sbjct: 351 PVDREEVESYQLTVEASDQGRDPGPRTATAAIFLSVEDDNDNAPQFSEKRYVVQVREDVA 410
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLER 172
G V RV A+D D+G NA+V+YS+ F +DA TG + LDYE + Y R
Sbjct: 411 PGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLR 470
Query: 173 V 173
V
Sbjct: 471 V 471
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LD 67
Y R+ G +++V A+D+D G LV Y ++ N Y + LD
Sbjct: 401 YVVQVREDVAPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 460
Query: 68 PATEHQGPIQ---DEGG---LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
T + ++ +GG LS+ + V ++V DIND P F S P++ +V E G
Sbjct: 461 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 520
Query: 120 VGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V A DAD G NA + Y V D PF ++ TG I LD E+ Y
Sbjct: 521 VLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFY 573
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------------AASYFNLDPATEHQ-- 73
+G +++ V A D+D+ ++ Y++ NT + LD E Q
Sbjct: 622 VGTSVVTVSAVDRDA--HSVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYV 679
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G TA V + VTD N P FQS Y ++ E + G V + ATD D G
Sbjct: 680 LAVTASDGTRQDTAQVVVNVTDANTHRPVFQSSHYTVNINEDRPAGTTVVLISATDEDTG 739
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + IP F +DA+TG + T LDYE Q Y
Sbjct: 740 ENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSY 778
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 33/181 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPATE---- 71
Y A + G + ++A D D G+ G +EY L D+ ++ +F+LDP T
Sbjct: 183 YQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSN--HFFSLDPITGAVTT 240
Query: 72 -------------HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ QD G S+ AT+ I VTD ND +P F+ Y+ S+ E +
Sbjct: 241 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 300
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV-------PEDIPFVVDANTGDIRTNKALDYEKQQL 168
G V V ATD D NA + Y + P ++ F +D +G IRT +D E+ +
Sbjct: 301 VGYEVLTVRATDGDAPPNANILYRLLEESGGSPSEV-FEIDPRSGVIRTRGPVDREEVES 359
Query: 169 Y 169
Y
Sbjct: 360 Y 360
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSSTA 86
G T++ + ATD+D+G+ + Y + D+ F +D A Q + E +S T
Sbjct: 725 GTTVVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTL 780
Query: 87 TVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
+ R V D+ND P+F Y+ SV E +V ++ ATD D
Sbjct: 781 AITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRD 840
Query: 130 EGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N V+Y+ D F+V++ +G +RT + LD E Y+ R + + K
Sbjct: 841 SGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYAVDK 893
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLDPATEHQGPIQ-- 77
+++Q+ ATD+DSG G V Y + + LD Q ++
Sbjct: 830 SVLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAY 889
Query: 78 --DEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G + +++ VT D+ND P F+ ++ V E GLAV RV ATD DEG
Sbjct: 890 AVDKGMPPARTPMDVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGT 949
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDY + Y+
Sbjct: 950 NAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYXDRPEYV 990
Score = 42.7 bits (99), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 32/163 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G+ + +V ATD D G + Y++++ N F LD + + D
Sbjct: 933 IGLAVARVTATDPDEGTNAQIMYQIVEGNI--PEVFQLDIFSGELTALVDLDYXDRPEYV 990
Query: 79 ------EGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRV 123
L S ATV++R+ D ND P + F S P G A+GRV
Sbjct: 991 LVIQATSAPLVSRATVHVRLLDRNDNPPVLGNFEILFNNYVTNRSSSFPGG----AIGRV 1046
Query: 124 HATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
A D D + + ++ V ++A+TG++R ++ALD +
Sbjct: 1047 PAHDPDISDSLTYSFERGNELSLVLLNASTGELRLSRALDNNR 1089
Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 32/136 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASY-------------FN 65
LG ++ V+A D D+G +EYRL ++N T S F
Sbjct: 517 LGYLVLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFYSFG 576
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
++ A +H P L+++A+V++ + D+ND NP F Y + E G +V V
Sbjct: 577 VE-ARDHGTP-----ALTASASVSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVS 630
Query: 125 ATDADEGQNAVVYYSV 140
A D D ++V+ Y +
Sbjct: 631 AVDRD--AHSVITYQI 644
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 100 PEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV------PEDIPFVVDANT 152
P+FQ Y+ +VPE Q G V + A D DEG+ + Y++ + F +D T
Sbjct: 176 PQFQPPSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNHFFSLDPIT 235
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G + T + LD E + ++ RV
Sbjct: 236 GAVTTAEELDRETKSTHVFRV 256
>gi|195582246|ref|XP_002080939.1| GD10750 [Drosophila simulans]
gi|194192948|gb|EDX06524.1| GD10750 [Drosophila simulans]
Length = 3463
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------- 68
S Y A + +G +++QV A+D D G G ++Y L D + + S F +DP
Sbjct: 1009 SPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGS-FVIDPTSGTIRT 1067
Query: 69 ---------ATEHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
A H I + G LSST V IR+ D+ND P F S VPE
Sbjct: 1068 NKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSP 1127
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV 140
G VG +HA D DEG NAVV+YS+
Sbjct: 1128 VGSVVGEIHAHDPDEGVNAVVHYSI 1152
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 83/178 (46%), Gaps = 27/178 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPATEH--- 72
Y A + +G T++ V ATD D G + Y L + N + F+++P T
Sbjct: 902 YSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVT 961
Query: 73 QGPIQDE-------------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
P+ E GG LS T V I VTD+ND P F+S Y+ S+ E
Sbjct: 962 NAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDAL 1021
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G +V +V A+D D G N + Y + ED FV+D +G IRTNK LD E ++
Sbjct: 1022 VGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVF 1079
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 83/191 (43%), Gaps = 44/191 (23%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--------FNLDPAT 70
+ A R+ +G T++ ++ATD+D GK +EY + + TD A F +D
Sbjct: 469 FEASIREGATVGSTVITLRATDQDIGKNAEIEYGI-EAVTDGAGLAQDQEMPIFRID--- 524
Query: 71 EHQGPIQDEGGL-------------------------SSTATVNIRVTDINDKNPEFQSL 105
G I L ++TA+V ++V D ND P+F
Sbjct: 525 SRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSER 584
Query: 106 PYEFSVPEGQDG----LAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTN 158
Y VPE Q G V + ATDAD+G NA + Y++ F +D+ +GD+
Sbjct: 585 TYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLV 644
Query: 159 KALDYEKQQLY 169
K LDYE + Y
Sbjct: 645 KPLDYESVRSY 655
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 55/102 (53%), Gaps = 9/102 (8%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG S TATV+I +TD N+ P F++ PY SV E G V V ATD+D G NA +
Sbjct: 873 DSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQI 932
Query: 137 YYSVPEDI--------PFVVDANTGDIRTNKALDYEKQQLYL 170
YS+ E+ PF ++ TG I TN LD E YL
Sbjct: 933 TYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYL 974
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 25/158 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------- 76
T+ ++ATD D G + Y ++ NT S F++D + +
Sbjct: 602 TVAHIRATDADQGNNAAIRYAIIGGNTQ--SQFSIDSMSGDVSLVKPLDYESVRSYRLVI 659
Query: 77 --QDEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
QD G S + T + V D ND P F + ++ SV E G + RV A D+DEG
Sbjct: 660 RAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEG 719
Query: 132 QNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQ 166
NA + YS+ E + P VD TG ++T K LD E+Q
Sbjct: 720 ANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQ 757
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
S T T+ + V D ND +P F++ +E S+ EG G V + ATD D G+NA + Y +
Sbjct: 445 SGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIE 504
Query: 142 -----------EDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+++P F +D+ +G I T +LD E Y
Sbjct: 505 AVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSY 544
Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 29/167 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP-- 75
+G +++V+A D D G + Y + + + + +DP T E QG
Sbjct: 704 VGYNIIRVQAYDSDEGANAEITYSISERDDNFP--LAVDPRTGWVQTIKPLDREEQGRFA 761
Query: 76 ---IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDA 128
+ +GG+ S++++V I V D+ND +P F YE +V E Q G V V ATD
Sbjct: 762 FQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDP 821
Query: 129 DEGQNAVVYYSVPEDIP---FVVDANTGD--IRTNKALDYEKQQLYL 170
DE ++ ++Y + F + + G I ++LDY++++ +L
Sbjct: 822 DE--DSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFL 866
>gi|118092647|ref|XP_421595.2| PREDICTED: cadherin-23 [Gallus gallus]
Length = 3365
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 78/160 (48%), Gaps = 27/160 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD------------PATEHQGP-- 75
G ++QV+ATD+D+G ++ Y + N D F +D P E Q
Sbjct: 1550 GTAVVQVRATDRDAGLNSVLSYYITHGNEDLT--FRMDRVTGEIATRPSPPDRERQSSYC 1607
Query: 76 ----IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATD 127
++DEG LS+T V + + D ND P FQ YE ++ EG L + V A D
Sbjct: 1608 LLVTVEDEGTPSLSATTKVFVTILDENDNAPVFQQQLYEVTLDEGPATLNATLVTVQALD 1667
Query: 128 ADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYE 164
DEG N+ V Y++ E F +++ TG IRT K LDYE
Sbjct: 1668 RDEGPNSTVTYAITEGNILGTFYINSTTGQIRTLKELDYE 1707
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 79/163 (48%), Gaps = 23/163 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDN------NTDAASYFNL--------DPATEHQG 74
LG +++VKATD DSG+F +++Y L D N D + L D T
Sbjct: 2423 LGTVILRVKATDADSGRFAVIQYSLGDGEGKFGINPDTGDIYILSALDREKKDHYTLTAV 2482
Query: 75 PIQDEGGLSS-----TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+ G +SS + V I V DIND P+F + SV E + G +V + ATD
Sbjct: 2483 ARDNPGDISSNRRENSVQVLITVLDINDFRPQFSKSQFSTSVYENEPAGTSVITMTATDL 2542
Query: 129 DEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKAL-DYEKQQL 168
DEG N VV YS+ P F ++ ++G I + + L YE+ L
Sbjct: 2543 DEGDNGVVTYSIEGPGAEAFKINKDSGLITSRRRLQSYERFNL 2585
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 78/165 (47%), Gaps = 30/165 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLD-------------------NNT---DAASYFNLD 67
G TL+ + A D D G G + Y LLD N T + + N
Sbjct: 2318 GTTLISISAVDPDKGANGQITYELLDLSPEGYACLEDQSAGKVVANRTVDYEEVQWLNFT 2377
Query: 68 -PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHA 125
A+++ P + S+ V +++ DIND NP F Y+ +V E G + RV A
Sbjct: 2378 VRASDNGSPRR-----SAEIPVYLQIVDINDNNPIFSQPSYQKAVFEDVPLGTVILRVKA 2432
Query: 126 TDADEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLY 169
TDAD G+ AV+ YS+ + + F ++ +TGDI ALD EK+ Y
Sbjct: 2433 TDADSGRFAVIQYSLGDGEGKFGINPDTGDIYILSALDREKKDHY 2477
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 77/164 (46%), Gaps = 26/164 (15%)
Query: 31 VTLMQ--VKATDKDSGKFGLVEYRLLDNNTDAASYFN------------------LDPAT 70
VT++ + A D D G +V Y+LL + D N LDP
Sbjct: 1984 VTMLNGPILALDSDQGSNAVVTYQLLGTSPDLFIINNRTGVVSVKPGGVIDREALLDPLL 2043
Query: 71 EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
E D GGL+STA++ + + D ND P FQ + + E G +V +V ATDAD
Sbjct: 2044 EFTLIALDTGGLNSTASLTVTILDDNDNRPVFQPVSITARLRENSPPGFSVLQVTATDAD 2103
Query: 130 EGQNAVVYYSVP---EDIPFVVDANTGDIRT-NKALDYEKQQLY 169
G N + Y + +D F++DA TG IR N ++D E++ Y
Sbjct: 2104 SGLNKQLDYRIEGGGQD-RFLIDATTGVIRVANLSIDREERDAY 2146
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV-PED 143
TVNI+V D+ND P F + PY +PE G + V+ATD D+G V YS P
Sbjct: 122 GTVNIQVGDVNDNAPRFHNQPYSVRIPENTPVGTPIFIVNATDPDQGAGGSVLYSFQPPS 181
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLY 169
F +D+ G + + LDYE Q Y
Sbjct: 182 SFFAIDSGRGIVTVIRELDYEVTQAY 207
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 70/167 (41%), Gaps = 29/167 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LDPATEH----- 72
L TL+ V+A D+D G V Y + + N Y N LD H
Sbjct: 1656 LNATLVTVQALDRDEGPNSTVTYAITEGNILGTFYINSTTGQIRTLKELDYEISHGRYTL 1715
Query: 73 ------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYE--FSVPEGQDGLAVGRVH 124
Q PI L+ST TV + + DIND P F PYE F V EGQ G +
Sbjct: 1716 VVTATDQCPIASR-RLTSTTTVLVNLNDINDNCPTFPR-PYEGPFDVTEGQPGPRIWTFL 1773
Query: 125 ATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
A D D G V YS+ P FV+ G++R K + +++ +
Sbjct: 1774 AHDGDSGPGGQVEYSIIAGDPLGEFVISPVEGELRVRKDAELDRENI 1820
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVP 141
+S+ATV + + D+ND +P FQ+LP+ + EG G +V +V A D DEG N V Y +
Sbjct: 877 TSSATVFVNLLDLNDNDPTFQNLPFIAEISEGLPAGTSVFQVLAIDLDEGPNGWVTYRMQ 936
Query: 142 EDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
+P F++++ +G I + LD E+ Y RV
Sbjct: 937 VGMPRMDFLINSTSGLIISTTVLDRERITEYYLRV 971
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 77/161 (47%), Gaps = 21/161 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNTD----AASYFNLDPATEHQGPI 76
G ++ QV A D D G G V YR+ L N+T + + + + TE+ +
Sbjct: 912 GTSVFQVLAIDLDEGPNGWVTYRMQVGMPRMDFLINSTSGLIISTTVLDRERITEYYLRV 971
Query: 77 --QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEG 131
D G SST+T+ ++V D+ND++P F Y S+PE V R++ TDAD G
Sbjct: 972 VASDAGTPSKSSTSTLTVKVLDVNDESPTFFPAIYNVSLPENVARDFKVVRLNCTDADVG 1031
Query: 132 QNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
NA + Y + +D F V G +RT +LD E Y
Sbjct: 1032 LNAELSYFITGGNQDGKFSVGFRDGVVRTVVSLDRETVASY 1072
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 26/166 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT--------------------E 71
+++QVKATD D G G V YR++ N + F ++P++ E
Sbjct: 1126 SIVQVKATDADEGVNGRVWYRIVKGN--EHNNFRINPSSGLLMRGVRPLDREQNSSHVLE 1183
Query: 72 HQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPY-EFSVPEGQD-GLAVGRVHATDAD 129
+ + G + S+ V + V D+ND+ P F Y + E G +V V ATD D
Sbjct: 1184 VEAYNTEHGPMRSSVRVIVYVEDVNDEVPVFTQRQYNRLGLRETAGIGTSVAVVRATDRD 1243
Query: 130 EGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
G +V Y + + F +D +TG I T LDYE + YL V
Sbjct: 1244 TGNGGLVSYQILSGAEGKFEIDESTGLITTIDYLDYETKTSYLMNV 1289
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 70/168 (41%), Gaps = 20/168 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL--------LDNNTDAASYF-NLDP 68
Y + +G T++QV ATD D G +G V Y LD +T LD
Sbjct: 470 LYNVSLPENATVGTTVLQVHATDNDVGSYGKVSYFFSDDPDRFSLDKDTGVILLMARLDF 529
Query: 69 ATEHQGPI----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRV 123
T + + +D GG + + I V D+ND P FQ Y ++ E + + V R+
Sbjct: 530 ETMQRYTLTVIARDGGGEETAGRIRINVLDVNDNVPTFQKEAYLGALRENEPSVTQVVRL 589
Query: 124 HATDADEGQNAVVYYSVPEDIPF------VVDANTGDIRTNKALDYEK 165
A+D D N + YS+ F V G I N LDYE+
Sbjct: 590 RASDEDSPPNNQITYSIVHASAFREYFDITVSEGYGVISVNHPLDYEQ 637
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
LSST V +RV DIND +P +LP ++ E + V R+ A DAD+G NA++ + +
Sbjct: 1837 LSSTMLVGVRVLDINDNDPVLLNLPMNITLSEHAPVSSFVTRILAQDADQGPNALLTFDI 1896
Query: 141 P---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ F +++ TG I N+ LD E+ Y
Sbjct: 1897 TAGNKESAFYINSTTGIIYVNRPLDREQVAEY 1928
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 58/127 (45%), Gaps = 18/127 (14%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYR---------LLDNNTDAASYFNLDPATE 71
A R+ G +++QV ATD DSG ++YR L+D T NL E
Sbjct: 2082 ARLRENSPPGFSVLQVTATDADSGLNKQLDYRIEGGGQDRFLIDATTGVIRVANLSIDRE 2141
Query: 72 HQGPIQ------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR 122
+ Q D+G LS TATV+I + D+ND PEF + SVPE G V
Sbjct: 2142 ERDAYQLTVVAVDQGTPALSGTATVSIFIDDVNDCRPEFINPIQTVSVPESATPGTVVAE 2201
Query: 123 VHATDAD 129
V A D D
Sbjct: 2202 VTAIDRD 2208
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDADEGQNAVVYYSV- 140
+ TATV + V D+ND P F YE SVPE ++ +V ATDADEG N V+Y +
Sbjct: 1089 TGTATVYVTVLDVNDNRPIFLQSSYEASVPEDIPAASSIVQVKATDADEGVNGRVWYRIV 1148
Query: 141 --PEDIPFVVDANTGDI-RTNKALDYEKQQLYLERV 173
E F ++ ++G + R + LD E+ ++ V
Sbjct: 1149 KGNEHNNFRINPSSGLLMRGVRPLDREQNSSHVLEV 1184
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 71/171 (41%), Gaps = 38/171 (22%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYR----------------LLDNNTDAASY--FNLDPATE 71
G +++ + ATD D G G+V Y L+ + SY FNL
Sbjct: 2531 GTSVITMTATDLDEGDNGVVTYSIEGPGAEAFKINKDSGLITSRRRLQSYERFNLTVVAT 2590
Query: 72 HQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLP------YEFSVPEGQDGLAVGRVHA 125
+G L T ++I V DIND P F P + +P + V V+A
Sbjct: 2591 DKG----RPPLWGTTMLHIEVIDINDNRPVFVRPPNGTILHIKEEIPLRSN---VYEVYA 2643
Query: 126 TDADEGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYEKQQLY 169
TD DEG N V YS+ + F +DA +G I+T LD EKQ Y
Sbjct: 2644 TDKDEGLNGAVLYSLLKTGAGNKDWEYFSIDAVSGLIQTAMRLDREKQAEY 2694
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 79/191 (41%), Gaps = 49/191 (25%)
Query: 20 GAMARDKHELGV--TLMQVKATDKDSGKFGLVEYRLLDN---NTDAASYFNLDPAT---- 70
G + K E+ + + +V ATDKD G G V Y LL N D YF++D +
Sbjct: 2623 GTILHIKEEIPLRSNVYEVYATDKDEGLNGAVLYSLLKTGAGNKDW-EYFSIDAVSGLIQ 2681
Query: 71 -------EHQGPI--------QDEGGLSSTATVNIRVTDINDKNPEF-----QSLPYE-F 109
E Q Q + + + + + DI+D P F S Y+
Sbjct: 2682 TAMRLDREKQAEYNLIIVASDQGQPAYETMQPLQVALDDIDDNEPIFLRPSRDSPQYQAL 2741
Query: 110 SVPE-GQDGLAVGRVH-ATDADEGQNAVVYYSVPEDIPFVVDANT---------GDIRTN 158
SVPE Q G VG V A DADEG NA+VYY F+ N G ++
Sbjct: 2742 SVPEHSQPGTVVGNVTGAVDADEGSNAIVYY-------FIAAGNRESNFQLSREGKLQVL 2794
Query: 159 KALDYEKQQLY 169
+ LD EK+ Y
Sbjct: 2795 RDLDREKEPYY 2805
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI 144
A V I + + ND P F Y S+PE G V +VHATD D G V Y +D
Sbjct: 450 ARVKISLINENDNRPVFSKALYNVSLPENATVGTTVLQVHATDNDVGSYGKVSYFFSDDP 509
Query: 145 -PFVVDANTGDIRTNKALDYEKQQLY 169
F +D +TG I LD+E Q Y
Sbjct: 510 DRFSLDKDTGVILLMARLDFETMQRY 535
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 72/178 (40%), Gaps = 40/178 (22%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD---PATEHQGPIQDEGGLSS-- 84
G T+ + A D+D G+ + Y ++ NT+ S F LD A GP+ E S
Sbjct: 258 GTTVRMITAIDQDKGRPRGIGYTIVSGNTN--SIFALDYISGALTLNGPLDRENPFYSSG 315
Query: 85 ---------------------TATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGR 122
T T NI V D+ND PEF S Y ++PE Q G A+
Sbjct: 316 FILTVKGTELNDDRTPSNATVTTTFNILVIDVNDNAPEFNSSEYSVAIPELAQVGFALPL 375
Query: 123 -VHATDADE--GQNAV--VYYSVPEDIPFVVDANT----GDIRTNKA--LDYEKQQLY 169
+ D DE G N+V VY F++ + DIR A LD+E Y
Sbjct: 376 FIQVQDKDEHLGPNSVFEVYLVGNNSNHFIISPTSIQGKADIRVRVAVPLDFETIPRY 433
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSV----PEGQDGLAVGRVHATDADEGQNAVVYY 138
+ A VNI + DIND P ++ PY ++ P D V V A D D G+N V Y
Sbjct: 765 TGIAMVNITLLDINDNYPTWKDAPYFINLVEMTPPNSD---VTTVVAVDPDLGENGTVVY 821
Query: 139 SV-PEDIPFVVDANTGDIRTNKA-LDYEK---QQLYLERVFLIS 177
S+ P + + +++ +G IRT+ LD E Q+ L R ++S
Sbjct: 822 SIRPPNKFYSLNSTSGKIRTSGVQLDRENPNPQEAELMRRIVVS 865
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADE----GQNAVV 136
L+ST V I V D ND P F Y +V E G V ++ATD D GQ +++
Sbjct: 657 LNSTVPVTIEVFDENDNPPTFSKPSYVIAVMEDIMAGATVLFLNATDLDRSREYGQESII 716
Query: 137 YYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
YS+ F ++A +G+I T LD E + Y+
Sbjct: 717 -YSLEGSSHFRINARSGEITTTSLLDREAKSEYI 749
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 69/171 (40%), Gaps = 28/171 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + +G + V ATD D G G V Y +S+F +D
Sbjct: 143 YSVRIPENTPVGTPIFIVNATDPDQGAGGSVLYSF----QPPSSFFAIDSGRGIVTVIRE 198
Query: 71 -----------EHQGPIQDEGG-LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DG 117
+ QD+ LS+ A + I +TD+ D +P F +LPY ++ E G
Sbjct: 199 LDYEVTQAYQLQVNATDQDKNKPLSTLANLAITITDVQDMDPIFINLPYSTNIYENSPPG 258
Query: 118 LAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEK 165
V + A D D+G+ + Y++ + F +D +G + N LD E
Sbjct: 259 TTVRMITAIDQDKGRPRGIGYTIVSGNTNSIFALDYISGALTLNGPLDREN 309
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 60 AASYFNLDPATEHQGPIQDEGGLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVP-EGQ 115
A+S N P + LS+ T V I + DIND++P+F Y V + +
Sbjct: 2811 ASSQRNWSPPRGQRAGRAQHWDLSTDLTLQEVRIFLDDINDQSPQFTKSEYTAGVATDAK 2870
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV 140
G + RV A DAD G N++V YS+
Sbjct: 2871 VGSELIRVLAVDADVGNNSLVLYSI 2895
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEF---SVPEG-QDGLAVGRVHATDADEGQNAVVYYSV- 140
A + + V D+ND P F+ + + EG G + + A D D+G N + Y +
Sbjct: 2283 AKLTVNVLDVNDNTPRFRPFGVTYFTERILEGATQGTTLISISAVDPDKGANGQITYELL 2342
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQ 167
PE + D + G + N+ +DYE+ Q
Sbjct: 2343 DLSPEGYACLEDQSAGKVVANRTVDYEEVQ 2372
>gi|397490949|ref|XP_003816443.1| PREDICTED: protocadherin Fat 4 [Pan paniscus]
Length = 4981
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 83/170 (48%), Gaps = 22/170 (12%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL++Y + N + A + +
Sbjct: 3096 ATIPESHSVGSIVRTVSARDRDAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYE 3155
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
+H+ I D G ++ T +V + V D+ND +P F S Y +V E G V
Sbjct: 3156 LCQKHEMTISAIDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIH 3215
Query: 123 VHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y+V D+ FV+D NTG I T LD+E +Q Y
Sbjct: 3216 LNATDADSGTNAVIAYTVQSSDSDL-FVIDPNTGVITTQGFLDFETKQSY 3264
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F +DP + E +
Sbjct: 1756 GSKIMQLTAMDADEGANALVTYTIISGADDS---FRIDPESGDLIATRRLDRERRSKYSL 1812
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQ 132
D+G SS +NI V+D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1813 LVRADDGLQSSDMRINITVSDVNDHTPKFSRPVYSFDIPEDTIPGSLVAAILATDDDSGV 1872
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG + LDYE QQ Y+ V
Sbjct: 1873 NGEITYIVNEDDEDGIFFLNPITGVFNLTRLLDYEVQQYYILTV 1916
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 74/168 (44%), Gaps = 22/168 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y ++D N F ++P+T
Sbjct: 2774 SQIFSAHVPENSSLGYTVTRVTTSDEDVGINAISRYSIMDANLP----FTINPSTGDIVI 2829
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V I VTDIND P F Y PE + G
Sbjct: 2830 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNAPRFSRTSYYLDCPELTEIGS 2889
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
V +V ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 2890 KVAQVFATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQILKYQN 2937
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 76/162 (46%), Gaps = 23/162 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI----QDEGGL--- 82
G L+ ++ATD D G G V + L + TD S F LDP + I ++E
Sbjct: 599 GTELLMLRATDGDLGDNGTVRFSLQEAETDRRS-FRLDPVSGRLSTISSLDREEQAFYSL 657
Query: 83 ------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
SS A +N+ + DIND +P F + Y + E + G + + V ATD D
Sbjct: 658 LVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKENEPGGSYITTVSATDPD 717
Query: 130 EGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V YS+ + F V+A +G I T ALD E++ Y
Sbjct: 718 LGTNGTVKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAY 759
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 75/173 (43%), Gaps = 21/173 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-----------AASYFNL 66
FY A + +++V A+D D G GL+ Y ++ N + A L
Sbjct: 1214 FYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEERQFAIDSTSGQVALIGKL 1273
Query: 67 D----PATEHQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
D PA D G L+ST T+NI + D ND P F V E + G
Sbjct: 1274 DYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGEL 1333
Query: 120 VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD+D G NA +YYS+ F + NTG I K LD+E Q LY
Sbjct: 1334 VSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGSIFLAKKLDFETQSLY 1386
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 24/162 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V A DKDSG G ++Y +++ N + + F+++ AT ++
Sbjct: 2687 ILTVSAMDKDSGPNGQLDYEIVNGNMENS--FSINHATGEIRSVRPLDREKVSHYVLTIK 2744
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G S + +V I + D ND P F + + VPE G V RV +D D G
Sbjct: 2745 SSDKGSPSQSTSVKVMINILDENDNAPRFSQI-FSAHVPENSSLGYTVTRVTTSDEDVGI 2803
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA+ YS+ + ++PF ++ +TGDI ++ L+ E Y RV
Sbjct: 2804 NAISRYSIMDANLPFTINPSTGDIVISRPLNREDTDRYRIRV 2845
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 38 ATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGGLSSTAT--- 87
ATD D G G+ YR++ N A F LD G + +GGL T
Sbjct: 159 ATDSDIGSNGVDHRSYRIIRGN--EAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQY 216
Query: 88 -------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
VN+ V DIND P F S Y+ VPE G +V +V A D
Sbjct: 217 QLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAAD 276
Query: 128 ADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ADEG NA + Y + E PF +D TG I + LD+E ++ Y
Sbjct: 277 ADEGTNADIRYRLQDEGTPFQMDPETGLITVREPLDFEARRQY 319
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +ATD DSG +EY LL+ + S +D G + D
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATD 2128
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y+ + E G + +V A D DEG N
Sbjct: 2129 KGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQ 2188
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y + + F +D+ TG I K LD EK Y
Sbjct: 2189 VRYGIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTY 2225
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPIQ---- 77
T++QV A D D G + Y L N D A + LD T+ + +
Sbjct: 2278 TVLQVVARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELGVTQSLDRETKERFVLMITAT 2337
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNA 134
D G L+ T T+N+ V D+ND P F S Y ++PE G V V+A+DAD NA
Sbjct: 2338 DSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIPEDAPTGTDVLLVNASDADASTNA 2397
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V+ + + F ++ +TG I T+ LD E + Y
Sbjct: 2398 VIRI-IGGNSQFTINPSTGQIITSALLDRETKDNY 2431
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF---NLDPAT 70
D L Y + + +V+A+DKDSG G + Y + + NT DA F L +
Sbjct: 997 DQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGNTGDAFGIFPDGQLYIKS 1056
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E +QD LS+T V + + D+ND P F S Y F E Q G
Sbjct: 1057 ELDRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAG 1116
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
VG+V A D D G N V YS P F + A +G+I D E
Sbjct: 1117 SFVGKVSAVDKDFGPNGEVRYSFEMMQPDFELHAISGEITNTHQFDRE 1164
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 76/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3210 GTTVIHLNATDADSGTNAVIAYTVQSSDSD---LFVIDPNT---GVITTQGFLDFETKQS 3263
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S ATVN+++ N+ P F S Y F + E G VG V A+
Sbjct: 3264 YHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFAS 3323
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F ++ TG I + LD EK+ ERV L
Sbjct: 3324 DRDLGTDGEVHYLIFGNSRKKGFQINKKTGQIYVSGILDREKE----ERVSL 3371
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L ATV++ + DIND P+F Y+ ++ E L V RV A+D DEG N +++YS+
Sbjct: 1190 LKDQATVHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSI 1249
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E+ F +D+ +G + LDYE Y
Sbjct: 1250 IKGNEERQFAIDSTSGQVALIGKLDYEATPAY 1281
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 75/167 (44%), Gaps = 32/167 (19%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRL----------LDNNTDAAS------------YF 64
++G L++V A D KD G VEY + LDN+T S YF
Sbjct: 2997 KVGTKLIRVTAIDDKDFGLNSEVEYFISNDNHLGKFKLDNDTGWISVASSLISDLNQNYF 3056
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRV 123
A + P LSS ATV+I VT+ N PEF ++PE G V V
Sbjct: 3057 ITVTAKDKGNP-----PLSSQATVHITVTEENYHTPEFSQSHMSATIPESHSVGSIVRTV 3111
Query: 124 HATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQ 167
A D D N ++ YS+ E+ F ++++TG + KALDYE Q
Sbjct: 3112 SARDRDAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYELCQ 3158
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 27/165 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGPI--- 76
G ++QV A D D G G V Y +++ NT+ F +D P + P
Sbjct: 2170 GTDIIQVFAADGDEGTNGQVRYGIVNGNTNQE--FRIDSVTGAITVAKPLDREKTPTYHL 2227
Query: 77 ----QDEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDA 128
D G + T+TV+I + DIND P F+ PY +VPE L V +V A D
Sbjct: 2228 TVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPENLGTLPRTVLQVVARDD 2287
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D+G N+ + Y + ED F + A +G++ ++LD E ++ ++
Sbjct: 2288 DQGSNSKLSYVLFGGNEDNAFTLSA-SGELGVTQSLDRETKERFV 2331
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 70/174 (40%), Gaps = 32/174 (18%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPATEHQGPIQ 77
+ + G + Q KA D D G G+V Y L N N + L P H G Q
Sbjct: 904 ENWQAGHNIFQAKAVDPDEGVNGMVLYSLKQNPKNLFTINEKNGTISLLGPLDVHAGSYQ 963
Query: 78 DE--------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
E LSS+ + + V D+ND +P F L YE ++ E + +V A+D
Sbjct: 964 IEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDK 1023
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYLERV 173
D G N + Y++ E NTGD + LD E Q Y+ V
Sbjct: 1024 DSGANGEIAYTIAE-------GNTGDAFGIFPDGQLYIKSELDRELQDRYVLMV 1070
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1724 AEVEITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTYTIISGA 1783
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ + LD E++ Y
Sbjct: 1784 DDSFRIDPESGDLIATRRLDRERRSKY 1810
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LSS+ +V + VTD+ND P FQ PY +P G V V TDAD G N+ ++YS+
Sbjct: 2446 LSSSTSVLVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSFVFAVTVTDADIGPNSELHYSL 2505
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 70/164 (42%), Gaps = 35/164 (21%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--DEGGLS---------- 83
+ ATD DSG + Y ++ N +F++ +EH G + GGL
Sbjct: 497 ISATDGDSGLNANLRYSIVSGN--GLGWFHI---SEHSGLVTTGSSGGLDRELASQIVLN 551
Query: 84 ------------STATVNIRVTDINDKNPEF-QSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
S A + + + D+ND+ P F Q Y+ SV E G + + ATD D
Sbjct: 552 ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLMLRATDGD 611
Query: 130 EGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V +S+ E F +D +G + T +LD E+Q Y
Sbjct: 612 LGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFY 655
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
SS ++I V D+ND P F+ P+ + E + V A D D G N + Y +
Sbjct: 2649 FSSYEKLDITVLDVNDNAPIFKEDPFISEILENLSPRKILTVSAMDKDSGPNGQLDYEIV 2708
Query: 142 E---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ F ++ TG+IR+ + LD EK Y+
Sbjct: 2709 NGNMENSFSINHATGEIRSVRPLDREKVSHYV 2740
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
G ++ VNI V D+ND +P F Q++ V Q G + + A D DEG N +V Y
Sbjct: 871 GTVTGDTMVNITVKDLNDNSPHFLQAIESVNVVENWQAGHNIFQAKAVDPDEGVNGMVLY 930
Query: 139 SV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
S+ P+++ F ++ G I LD +E
Sbjct: 931 SLKQNPKNL-FTINEKNGTISLLGPLDVHAGSYQIE 965
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 68/174 (39%), Gaps = 20/174 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G V+Y + + ++ LD
Sbjct: 694 YFAHIKENEPGGSYITTVSATDPDLGTNGTVKYSISAGDRSRFQVNAQSGVISTRMALDR 753
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V I V D D P F + Y F V E G VG
Sbjct: 754 EEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFENVALGYHVG 813
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A+ D N + Y D F ++ TG + T +D E+Q Y +V
Sbjct: 814 SVSASTMDLNSN-ISYLITTGDQKGMFAINQVTGQLTTANVIDREEQSFYQLKV 866
Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N + Y + +
Sbjct: 1515 VTILVTDLNDNVPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEIEYEIINGDTDT 1574
Query: 146 FVVDANTGDIRTNKAL 161
F+VD +GD+R AL
Sbjct: 1575 FIVDRYSGDLRVASAL 1590
Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 55/123 (44%), Gaps = 5/123 (4%)
Query: 59 DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
++ S++NL H P +STA V+I + D+ND P F S P +PE
Sbjct: 2009 ESQSFYNL-VVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLS-PKLTYIPENTPID 2066
Query: 118 LAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
V + ATD D G N+ + Y++ P F + G++R LD E+ Y V
Sbjct: 2067 TVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2126
Query: 176 ISK 178
K
Sbjct: 2127 TDK 2129
Score = 39.7 bits (91), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG + Y + N F++ P T E Q
Sbjct: 1329 RIGELVSSVTATDSDSGDNADLYYSITGTNNHGT--FSISPNTGSIFLAKKLDFETQSLY 1386
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G SST +V I V D ND P F S+ E G +V V A D
Sbjct: 1387 KLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVTAHD 1446
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + Y++ + +P F +D G I TN +D E L+
Sbjct: 1447 PDADINGQLSYTIIQQMPRGNHFTIDEVKGTIYTNAEIDREFANLF 1492
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNAVVYYSV 140
SS A++ I V DIND P F Y ++ E G V + ATD D G NA + YS+
Sbjct: 456 SSVASLVIFVNDINDHPPVFSQQVYRVNLSEEAPPGSYVSGISATDGDSGLNANLRYSI 514
>gi|149640354|ref|XP_001507255.1| PREDICTED: protocadherin beta-2-like [Ornithorhynchus anatinus]
Length = 795
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 76/172 (44%), Gaps = 20/172 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y + +G L+ V A D D+G +G + Y + + + F +DP T
Sbjct: 246 LYETRIPENSPMGSLLLTVSAKDLDTGNYGEITYSIFQVSEEIRKTFLIDPRTGEIRLSG 305
Query: 71 -----EHQG-PIQ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
EH+ P+ D GGLS +TV ++VTD+ND PE S+PE V
Sbjct: 306 QLDFEEHKSYPVNVQATDGGGLSGKSTVLVQVTDVNDNPPEITMSSVIGSIPENTLETVV 365
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDA---NTGDIRTNKALDYEKQQLY 169
D D G N + ++ D+PF++ N + T++ALD E Q Y
Sbjct: 366 AVFSIADRDSGDNGRMVCTIQHDLPFILKQTIENVYTLVTDQALDRESQSEY 417
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS-- 139
S TA + I V DIND P F YE +PE G + V A D D G + YS
Sbjct: 223 SGTAQIRIVVLDINDNAPVFTQPLYETRIPENSPMGSLLLTVSAKDLDTGNYGEITYSIF 282
Query: 140 -VPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
V E+I F++D TG+IR + LD+E+ + Y
Sbjct: 283 QVSEEIRKTFLIDPRTGEIRLSGQLDFEEHKSY 315
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 11/103 (10%)
Query: 76 IQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
I D G L + + ++D+ND P F Y V E L +G VHA D D G+
Sbjct: 423 IMDLGSPNLKVEKNITVLISDVNDNPPVFNQTSYTLYVRENNSPALHIGSVHAVDRDSGE 482
Query: 133 NAVVYYSV--PE--DIPFV----VDANTGDIRTNKALDYEKQQ 167
NA V YS+ PE D+P ++++ G++ +++DYE Q
Sbjct: 483 NARVSYSLLSPEDGDLPLASYISINSDNGNLYALRSMDYEAIQ 525
Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDIPFVV 148
+RV+DIND +P F +PE G A D D G+N++ Y++ D F +
Sbjct: 121 LRVSDINDHSPAFLDKKMLLKIPESSPPGTVFSLESAQDLDVGRNSLQNYTIIPDTYFRI 180
Query: 149 DANTG-------DIRTNKALDYEKQ 166
G ++ N+ALD E+Q
Sbjct: 181 QIRVGMDGNKFPELVLNRALDREEQ 205
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 86/199 (43%), Gaps = 39/199 (19%)
Query: 7 PSALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL---DNNTDAASY 63
P TS +L+ R+ + + + V A D+DSG+ V Y LL D + ASY
Sbjct: 448 PPVFNQTSYTLY----VRENNSPALHIGSVHAVDRDSGENARVSYSLLSPEDGDLPLASY 503
Query: 64 FNL---------------DPATEHQGPIQD-EGG---LSSTATVNIRVTDINDKNP---- 100
++ + E Q ++ +GG L+S V + V D ND +P
Sbjct: 504 ISINSDNGNLYALRSMDYEAIQEFQFEVRAVDGGSPVLNSQTMVRVVVLDDNDNSPFVLY 563
Query: 101 --EFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGD 154
+ + P VP + G V +V A DAD QN+ + + + + F V + G+
Sbjct: 564 PLQNGTSPCNDLVPRWAEAGYLVTKVVAVDADSAQNSWLSFQLLKATDPGLFSVWPHNGE 623
Query: 155 IRTNKAL---DYEKQQLYL 170
+RT + + D KQ+L +
Sbjct: 624 VRTTRLITDRDPIKQRLVV 642
>gi|300793712|ref|NP_001179860.1| cadherin EGF LAG seven-pass G-type receptor 2 precursor [Bos
taurus]
Length = 2920
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 85/181 (46%), Gaps = 26/181 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS-YFNLDPAT---EHQG 74
Y R+ E+G ++ V+ATD D+ + YRLL+ + + S F +DP + +G
Sbjct: 291 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEESGGSPSEVFEIDPRSGVIRTRG 350
Query: 75 PI------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D G ++TA + + V D ND P+F Y V E
Sbjct: 351 PVDREEVESYQLTVEASDQGRDPGPRTATAAIFLSVEDDNDNAPQFSEKRYVVQVREDVA 410
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLER 172
G V RV A+D D+G NA+V+YS+ F +DA TG + LDYE + Y R
Sbjct: 411 PGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLR 470
Query: 173 V 173
V
Sbjct: 471 V 471
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LD 67
Y R+ G +++V A+D+D G LV Y ++ N Y + LD
Sbjct: 401 YVVQVREDVAPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 460
Query: 68 PATEHQGPIQ---DEGG---LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
T + ++ +GG LS+ + V ++V DIND P F S P++ +V E G
Sbjct: 461 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 520
Query: 120 VGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V A DAD G NA + Y V D PF ++ TG I LD E+ Y
Sbjct: 521 VLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFY 573
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------------AASYFNLDPATEHQ-- 73
+G +++ V A D+D+ ++ Y++ NT + LD E Q
Sbjct: 622 VGTSVVTVSAVDRDA--HSVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYV 679
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G TA V + VTD N P FQS Y ++ E + G V + ATD D G
Sbjct: 680 LAVTASDGTRQDTAQVVVNVTDANTHRPVFQSSHYTVNINEDRPAGTTVVLISATDEDTG 739
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + IP F +DA+TG + T LDYE Q Y
Sbjct: 740 ENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSY 778
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 33/181 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPATE---- 71
Y A + G + ++A D D G+ G +EY L D+ ++ +F+LDP T
Sbjct: 183 YQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSN--HFFSLDPITGAVTT 240
Query: 72 -------------HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ QD G S+ AT+ I VTD ND +P F+ Y+ S+ E +
Sbjct: 241 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 300
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV-------PEDIPFVVDANTGDIRTNKALDYEKQQL 168
G V V ATD D NA + Y + P ++ F +D +G IRT +D E+ +
Sbjct: 301 VGYEVLTVRATDGDAPPNANILYRLLEESGGSPSEV-FEIDPRSGVIRTRGPVDREEVES 359
Query: 169 Y 169
Y
Sbjct: 360 Y 360
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLDPATEHQGPIQ-- 77
+++Q+ ATD+DSG G V Y + + LD Q ++
Sbjct: 830 SVLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAY 889
Query: 78 --DEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G + +++ VT D+ND P F+ ++ V E GLAV RV ATD DEG
Sbjct: 890 AVDKGMPPARTPMDVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGT 949
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 950 NAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYEDRPEYV 990
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSSTA 86
G T++ + ATD+D+G+ + Y + D+ F +D A Q + E +S T
Sbjct: 725 GTTVVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTL 780
Query: 87 TVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
+ R V D+ND P+F Y+ SV E +V ++ ATD D
Sbjct: 781 AITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRD 840
Query: 130 EGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N V+Y+ D F+V++ +G +RT + LD E Y+ R + + K
Sbjct: 841 SGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYAVDK 893
Score = 42.7 bits (99), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 32/163 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G+ + +V ATD D G + Y++++ N F LD + + D
Sbjct: 933 IGLAVARVTATDPDEGTNAQIMYQIVEGNI--PEVFQLDIFSGELTALVDLDYEDRPEYV 990
Query: 79 ------EGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRV 123
L S ATV++R+ D ND P + F S P G A+GRV
Sbjct: 991 LVIQATSAPLVSRATVHVRLLDRNDNPPVLGNFEILFNNYVTNRSSSFPGG----AIGRV 1046
Query: 124 HATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
A D D + + ++ V ++A+TG++R ++ALD +
Sbjct: 1047 PAHDPDISDSLTYSFERGNELSLVLLNASTGELRLSRALDNNR 1089
Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 32/136 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASY-------------FN 65
LG ++ V+A D D+G +EYRL ++N T S F
Sbjct: 517 LGYLVLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFYSFG 576
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
++ A +H P L+++A+V++ + D+ND NP F Y + E G +V V
Sbjct: 577 VE-ARDHGTP-----ALTASASVSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVS 630
Query: 125 ATDADEGQNAVVYYSV 140
A D D ++V+ Y +
Sbjct: 631 AVDRD--AHSVITYQI 644
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 100 PEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV------PEDIPFVVDANT 152
P+FQ Y+ +VPE Q G V + A D DEG+ + Y++ + F +D T
Sbjct: 176 PQFQPPSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNHFFSLDPIT 235
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G + T + LD E + ++ RV
Sbjct: 236 GAVTTAEELDRETKSTHVFRV 256
>gi|73490260|dbj|BAB61903.2| KIAA1773 protein [Homo sapiens]
Length = 3434
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 82/162 (50%), Gaps = 28/162 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGP- 75
G +++V A D D G G V Y L +F++DP + E Q
Sbjct: 625 GSFVVRVTARDPDQGTNGQVTYSLAPGAH--THWFSIDPTSGIITTAASLDYELEPQPQL 682
Query: 76 --IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ +GGL +S+ATV++ + D+ND P+FQ Y S+PEG Q G +V ATDAD
Sbjct: 683 IVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDAD 742
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEK 165
G ++ YS+ + PF +DA++GD+ T + LD ++
Sbjct: 743 SGPFGLLSYSLGAGLGSSGSPPFRIDAHSGDVCTTRTLDRDQ 784
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 27/177 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + R+ + G +L+ ++ATD D G G V Y + + + F+LDP T
Sbjct: 1790 YSVLLRENNPPGTSLLTLRATDPDVGANGQVTYGGVSSES-----FSLDPDTGVLTTLRA 1844
Query: 71 ---EHQGPI------QDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQDGLA 119
E Q I QD G V +RV D ND P F S VPEGQD
Sbjct: 1845 LDREEQEEINLTVYAQDRGSPPQLTHVTVRVAVEDENDHAPTFGSAHLSLEVPEGQDPQT 1904
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ + A+D D G N + Y + + P FV+D +G+ T + LD E + + R+
Sbjct: 1905 LTMLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQLRI 1961
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 21/147 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNT--DAASYFNLDPAT-----------EHQGPI 76
G + + A D D+G FG + Y LL+ + F L+ +T EH
Sbjct: 2858 GTLVTTLHAIDGDAGAFGRLRYSLLEAGPGPEGREAFALNSSTGELRARVPFDYEHTESF 2917
Query: 77 Q------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ D G LS++ TV++ VT ++ +P F + + F VPEG + G ++G V ATD D
Sbjct: 2918 RLLVGAADAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQVPEGARRGHSLGHVQATDED 2977
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDI 155
G + +V YS+ P F ++ TG +
Sbjct: 2978 GGADGLVLYSLATSSPYFGINQTTGAL 3004
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 74/167 (44%), Gaps = 28/167 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQ 73
+G L+ V+A+D D G GLV + + ++ D + F LD ++ HQ
Sbjct: 2753 VGAELLHVEASDADPGPHGLVRFTV--SSGDPSGLFELDESSGTLRLAHALDCETQARHQ 2810
Query: 74 GPIQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
+Q G + A V I V D+ND P F SV E Q G V +HA D D
Sbjct: 2811 LVVQAADPAGAHFALAPVTIEVQDVNDHGPAFPLNLLSTSVAENQPPGTLVTTLHAIDGD 2870
Query: 130 EGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYEKQQLY 169
G + YS+ E P F ++++TG++R DYE + +
Sbjct: 2871 AGAFGRLRYSLLEAGPGPEGREAFALNSSTGELRARVPFDYEHTESF 2917
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL---------------DPATEHQGPI 76
TL ++A+D D G G ++YR+LD + A +L +PA + +
Sbjct: 1904 TLTMLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQLRIEA 1963
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQN 133
+D G LS+T + + V D ND P F Y VPE G + ++ A D D G N
Sbjct: 1964 RDGGQPALSATLLLTVTVLDANDHAPAFPVPAYSVEVPEDVPAGTLLLQLQAHDPDAGAN 2023
Query: 134 AVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSYL 184
V Y + F+++ ++G++RT ALD E+ Y V + A L
Sbjct: 2024 GHVTYYLGAGTAGAFLLEPSSGELRTAAALDREQCPSYTFSVSAVDGAAAGPL 2076
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 64/146 (43%), Gaps = 26/146 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY--------------RLLDNNTDAASY 63
FY A + + G +QV ATD DSG FGL+ Y R+ ++ D +
Sbjct: 718 FYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGSSGSPPFRIDAHSGDVCTT 777
Query: 64 FNLDPATEHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEG 114
LD QGP D GGL S V + ++D ND P+F Y S+ +
Sbjct: 778 RTLD---RDQGPSSFDFTVTAVDGGGLKSMVYVKVFLSDENDNPPQFYPREYAASISAQS 834
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV 140
G AV R+ A D D+G + + Y +
Sbjct: 835 PPGTAVLRLRAHDPDQGSHGRLSYHI 860
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 67/158 (42%), Gaps = 30/158 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPI--- 76
G L+Q++A D D+G G V Y L A F L+P++ Q P
Sbjct: 2007 GTLLLQLQAHDPDAGANGHVTYYL---GAGTAGAFLLEPSSGELRTAAALDREQCPSYTF 2063
Query: 77 -------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-----GQDGLAVGRVH 124
G LS+T +V I V D+ND P F + P +P LA+ +
Sbjct: 2064 SVSAVDGAAAGPLSTTVSVTITVRDVNDHAPTFPTSPLRLRLPRPGPSFSTPTLALATLR 2123
Query: 125 ATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKA 160
A D D G NA + Y + P VD+ TG+IR ++
Sbjct: 2124 AEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARS 2161
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 73/167 (43%), Gaps = 32/167 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQ----- 73
G ++QV+A D G + Y L A+S F L+P + E Q
Sbjct: 1152 GTQVLQVQAQAPDGGP---ITYHLAAEG--ASSPFGLEPQSGWLWVRAALDREAQELYIL 1206
Query: 74 ------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
G + G + TATV + + + N+ +P P +V E Q G +VGRV AT
Sbjct: 1207 KVMAVSGSKAELGQQTGTATVRVSILNQNEHSPRLSEDPTFLAVAENQPPGTSVGRVFAT 1266
Query: 127 DADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
D D G N + YS+ + F + TG++ T + LD E+Q Y
Sbjct: 1267 DRDSGPNGRLTYSLQQLSEDSKAFRIHPQTGEVTTLQTLDREQQSSY 1313
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 71/160 (44%), Gaps = 27/160 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYFN-LDP----------- 68
G + V A D D G+ V YRL L ++T A S LD
Sbjct: 1697 GPAALHVVARDPDLGEAARVSYRLASGGDGHFRLHSSTGALSVVRPLDREQRAEHVLTVV 1756
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
A++H P + S+T + + V D+ND+ P FQ Y + E G ++ + ATD
Sbjct: 1757 ASDHGSPPR-----SATQVLTVSVADVNDEAPTFQQQEYSVLLRENNPPGTSLLTLRATD 1811
Query: 128 ADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQ 167
D G N V Y F +D +TG + T +ALD E+Q+
Sbjct: 1812 PDVGANGQVTYGGVSSESFSLDPDTGVLTTLRALDREEQE 1851
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A +++ + DIND P F Y V E G V +V A+DAD G N V Y +
Sbjct: 375 ALLDVTLLDINDHAPAFNQSRYHAVVSESLAPGSPVLQVFASDADAGVNGAVTYEINRRQ 434
Query: 143 ---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D PF +DA+TG ++ + LD+E+++++
Sbjct: 435 SEGDGPFSIDAHTGLLQLERPLDFEQRRVH 464
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 71/172 (41%), Gaps = 29/172 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH----------QGPI--- 76
G + ++A D DSG V + LL A F +DP T H GP
Sbjct: 1046 GTPIYTLRALDPDSGVNSRVTFTLLAGGGGA---FTVDPTTGHVRLMRPLGPSGGPAHEL 1102
Query: 77 ----QDEGGLSSTATVNIRVT--DINDKN--PEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D G T+ +RV D+ + P F S Y +P G G V +V A
Sbjct: 1103 ELEARDGGSPPRTSHFRLRVVVQDVGTRGLAPRFNSPTYRVDLPSGTTAGTQVLQVQAQA 1162
Query: 128 ADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D G + Y+ E PF ++ +G + ALD E Q+LY+ +V +S
Sbjct: 1163 PDGGP--ITYHLAAEGASSPFGLEPQSGWLWVRAALDREAQELYILKVMAVS 1212
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 78/172 (45%), Gaps = 35/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G ++ +V ATD+DSG G + Y L + D+ + F + P T E Q
Sbjct: 1257 GTSVGRVFATDRDSGPNGRLTYSLQQLSEDSKA-FRIHPQTGEVTTLQTLDREQQSSYQL 1315
Query: 76 ---IQDEGG--LSSTATVNIRVTDINDKNPEF--------QSLPYEF--SVPEGQDGLAV 120
+QD G S+T TV++ V D+ND +P F LP + VP G V
Sbjct: 1316 LVQVQDGGSPPRSTTGTVHVAVLDLNDNSPTFLQASGAAGGGLPIQVPDRVPPGT---LV 1372
Query: 121 GRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ A D DEG+N + Y++ P F + ++G++ T L ++ Y+
Sbjct: 1373 TTLQAKDPDEGENGTILYTLTGPGSELFSLHPHSGELLTAAPLIRAERPHYV 1424
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 76/176 (43%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------P 68
Y A + G +++++A D D G G + Y +L N+ F LD P
Sbjct: 826 YAASISAQSPPGTAVLRLRAHDPDQGSHGRLSYHILAGNS--PPLFTLDEQSGLLTVAWP 883
Query: 69 ATEHQGPI-------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGL 118
+ +D GGL + +A V+I + P F+ L Y FSVPE G
Sbjct: 884 LARRANSVVQLEIGAEDGGGLQAEPSARVDISIVPGTPTPPIFEQLQYVFSVPEDVAPGT 943
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
+VG V A + G+ A V S+ P F +DA +G ++T + LD E LE
Sbjct: 944 SVGIVQAHNP-PGRLAPVTLSLSGGDPRGLFSLDAVSGLLQTLRPLDRELLGPVLE 998
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 70/180 (38%), Gaps = 39/180 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + L L+QV+A D D G G + Y L + A F++DP
Sbjct: 2312 YVAFLPESRPLEGPLLQVEADDLDQGSGGQISYSLAASQP-ARGLFHVDPTTGTITTTAI 2370
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
AT+ P L +AT+ + V D ND P P+E V E
Sbjct: 2371 LDREIWAETRLVLMATDRGSP-----ALVGSATLTVMVIDTNDNRPTIPQ-PWELRVSED 2424
Query: 114 GQDGLAVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + +V D D G V++Y S P+D PF V G + LD+E+ Y
Sbjct: 2425 ALLGSEIAQVTGNDVDSG--PVLWYVLSPSGPQD-PFSVGRYGGRVSLTGPLDFEQCDRY 2481
Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------- 68
Y M + G ++ V ATD+DSG G + Y L A F++DP
Sbjct: 2516 LYQVMLLEHTPPGSAILSVSATDRDSGANGHISYHL----ASPADGFSVDPNNGTLFTIV 2571
Query: 69 ---ATEHQGP--------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG- 114
A H G +D G G ++ ATV++++ D ND P F Y +V E
Sbjct: 2572 GTVALGHDGSGAVDVVLEARDHGAPGRAARATVHVQLQDQNDHAPSFTLSHYRVAVTEDL 2631
Query: 115 QDGLAVGRVHATDADEGQ-NAVVYYSV 140
G + + ATDAD + +A V YS+
Sbjct: 2632 PPGSTLLTLEATDADGSRSHAAVDYSI 2658
Score = 42.7 bits (99), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 72/178 (40%), Gaps = 40/178 (22%)
Query: 30 GVTLMQVKATDKDSGK-FGLVEYRLLDNNTDAASYFNLDP----ATEHQGPIQDEGGL-- 82
G TL+ ++ATD D + V+Y ++ N F L+P A E GP G
Sbjct: 2634 GSTLLTLEATDADGSRSHAAVDYSIISGNW--GRVFQLEPRLAEAGESAGPGPRALGCLV 2691
Query: 83 ---------------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
SS V + V D+ND P F Y +VPE
Sbjct: 2692 LLEPLDFESLTQYNLTVAAADRGQPPQSSVVPVTVTVLDVNDNPPVFTRASYRVTVPEDT 2751
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
G + V A+DAD G + +V ++V P F +D ++G +R ALD E Q +
Sbjct: 2752 PVGAELLHVEASDADPGPHGLVRFTVSSGDPSGLFELDESSGTLRLAHALDCETQARH 2809
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 15/93 (16%)
Query: 82 LSSTATVNIRVTDINDKNPEF-------QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
L + A + VTD+ND P F + LP E ++P G V RV A D D+G N
Sbjct: 588 LRAEAAFVLHVTDVNDNAPAFDRQLYRPEPLP-EVALP----GSFVVRVTARDPDQGTNG 642
Query: 135 VVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
V YS+ F +D +G I T +LDYE
Sbjct: 643 QVTYSLAPGAHTHWFSIDPTSGIITTAASLDYE 675
Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD-EGQNAVVYYSVPEDIP 145
V ++V D N+ P F P ++PE + G A+ A+DAD G N+ V Y + P
Sbjct: 1558 VQVQVQDENEHAPAFARDPLALALPENPEPGAALYTFRASDADGPGPNSDVRYRLLRQEP 1617
Query: 146 FV----VDANTGDIRTNKALDYEKQQLYL 170
V +DA TG + + LD E L
Sbjct: 1618 PVPALRLDARTGALSAPRGLDRETTPALL 1646
>gi|410220660|gb|JAA07549.1| FAT tumor suppressor homolog 4 [Pan troglodytes]
gi|410307816|gb|JAA32508.1| FAT tumor suppressor homolog 4 [Pan troglodytes]
Length = 4983
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 83/170 (48%), Gaps = 22/170 (12%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL++Y + N + A + +
Sbjct: 3098 ATIPESHSVGSIVRTVSARDRDAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYE 3157
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
+H+ I D G ++ T +V + V D+ND +P F S Y +V E G V
Sbjct: 3158 LCQKHEMTISAIDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIH 3217
Query: 123 VHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y+V D+ FV+D NTG I T LD+E +Q Y
Sbjct: 3218 LNATDADSGTNAVIAYTVQSSDSDL-FVIDPNTGVITTQGFLDFETKQSY 3266
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F +DP + E +
Sbjct: 1756 GSKIMQLTAMDADEGANALVTYTIISGADDS---FRIDPESGDLIATRRLDRERRSKYSL 1812
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQ 132
D+G SS +NI V+D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1813 LVRADDGLQSSDMRINITVSDVNDHTPKFSRPVYSFDIPEDTIPGSLVAAILATDDDSGV 1872
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG + LDYE QQ Y+ V
Sbjct: 1873 NGEITYIVNEDDEDGIFFLNPITGVFNLTRLLDYEVQQYYILTV 1916
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 75/168 (44%), Gaps = 22/168 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y ++D A+ F ++P+T
Sbjct: 2776 SQIFSAHVPENSSLGYTVTRVTTSDEDVGINAISRYSIMD----ASLPFTINPSTGDIVI 2831
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V I VTDIND P F Y PE + G
Sbjct: 2832 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNAPRFSRTSYYLDCPELTEIGS 2891
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
V +V ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 2892 KVAQVFATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQILKYQN 2939
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 76/162 (46%), Gaps = 23/162 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI----QDEGGL--- 82
G L+ ++ATD D G G V + L + TD S F LDP + I ++E
Sbjct: 599 GTELLMLRATDGDLGDNGTVRFSLQEAETDRRS-FRLDPVSGRLSTISSLDREEQAFYSL 657
Query: 83 ------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
SS A +N+ + DIND +P F + Y + E + G + + V ATD D
Sbjct: 658 LVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKENEPGGSYITTVSATDPD 717
Query: 130 EGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V YS+ + F V+A +G I T ALD E++ Y
Sbjct: 718 LGTNGTVKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAY 759
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 75/173 (43%), Gaps = 21/173 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-----------AASYFNL 66
FY A + +++V A+D D G GL+ Y ++ N + A L
Sbjct: 1214 FYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIVKGNEERQFAIDSTSGQVALIGKL 1273
Query: 67 D----PATEHQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
D PA D G L+ST T+NI + D ND P F V E + G
Sbjct: 1274 DYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGEL 1333
Query: 120 VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD+D G NA +YYS+ F + NTG I K LD+E Q LY
Sbjct: 1334 VSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGSIFLAKKLDFETQSLY 1386
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 24/162 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V A DKDSG G ++Y +++ N + + F+++ AT ++
Sbjct: 2689 ILTVSAMDKDSGPNGQLDYEIVNGNMENS--FSINHATGEIRSVRPLDREKVSHYVLTIK 2746
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G S + +V I + D ND P F + + VPE G V RV +D D G
Sbjct: 2747 SSDKGSPSQSTSVKVMINILDENDNAPRFSQI-FSAHVPENSSLGYTVTRVTTSDEDVGI 2805
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA+ YS+ + +PF ++ +TGDI ++ L+ E Y RV
Sbjct: 2806 NAISRYSIMDASLPFTINPSTGDIVISRPLNREDTDRYRIRV 2847
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPIQ---- 77
T++QV A D D G + Y L N D A + LD T+ + +
Sbjct: 2278 TILQVVARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELGVTQSLDRETKERFVLMITAT 2337
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNA 134
D G L+ T T+N+ V D+ND P F S Y ++PE G V V+A+DAD NA
Sbjct: 2338 DSGSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIPEDAPTGTDVLLVNASDADASTNA 2397
Query: 135 VVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V+ Y + + F ++ +TG I T+ LD E + Y
Sbjct: 2398 VISYRIIGGNSQFTINPSTGQIITSALLDRETKDNY 2433
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 38 ATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGGLSSTAT--- 87
ATD D G G+ YR++ N A F LD G + +GGL T
Sbjct: 159 ATDSDIGSNGVDHRSYRIIRGN--EAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQY 216
Query: 88 -------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
VN+ V DIND P F S Y+ VPE G +V +V A D
Sbjct: 217 QLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAAD 276
Query: 128 ADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ADEG NA + Y + E PF +D TG I + LD+E ++ Y
Sbjct: 277 ADEGTNADIRYRLQDEGTPFQMDPETGLITVREPLDFEARRQY 319
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF---NLDPAT 70
D L Y + + +V+A+DKDSG G + Y + + NT DA F L +
Sbjct: 997 DQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGNTGDAFGIFPDGQLYIKS 1056
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E +QD LS+T V + + D+ND P F S Y F E Q G
Sbjct: 1057 ELDRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAG 1116
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
VG+V A D D G N V YS P F + A +G+I D E
Sbjct: 1117 SFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTHQFDRE 1164
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 76/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3212 GTTVIHLNATDADSGTNAVIAYTVQSSDSD---LFVIDPNT---GVITTQGFLDFETKQS 3265
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S ATVN+++ N+ P F S Y F + E G VG V A+
Sbjct: 3266 YHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFAS 3325
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F ++ TG I + LD EK+ ERV L
Sbjct: 3326 DRDLGTDGEVHYLIFGNSRKKGFQINKKTGQIYVSGILDREKE----ERVSL 3373
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L ATV++ + DIND P+F Y+ ++ E L V RV A+D DEG N +++YS+
Sbjct: 1190 LKDQATVHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSI 1249
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E+ F +D+ +G + LDYE Y
Sbjct: 1250 VKGNEERQFAIDSTSGQVALIGKLDYEATPAY 1281
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 76/169 (44%), Gaps = 32/169 (18%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRL----------LDNNTDAAS------------YF 64
++G L++V A D KD G VEY + LDN+T S YF
Sbjct: 2999 KVGTKLIRVTAIDDKDFGLNSEVEYFISNDNHLGKFKLDNDTGWISVASSLISDLNQNYF 3058
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRV 123
A + P LSS ATV+I VT+ N PEF ++PE G V V
Sbjct: 3059 ITVTAKDKGNP-----PLSSQATVHITVTEENYHTPEFSQSHMSATIPESHSVGSIVRTV 3113
Query: 124 HATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D N ++ YS+ E+ F ++++TG + KALDYE Q +
Sbjct: 3114 SARDRDAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYELCQKH 3162
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 71/174 (40%), Gaps = 32/174 (18%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPATEHQGPIQ 77
+ + G ++ Q KA D D G G+V Y L N N + L P H G Q
Sbjct: 904 ENWQAGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFTINEKNGTISLLGPLDVHAGSYQ 963
Query: 78 DE--------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
E LSS+ + + V D+ND +P F L YE ++ E + +V A+D
Sbjct: 964 IEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDK 1023
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYLERV 173
D G N + Y++ E NTGD + LD E Q Y+ V
Sbjct: 1024 DSGANGEIAYTIAE-------GNTGDAFGIFPDGQLYIKSELDRELQDRYVLMV 1070
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 27/165 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGPI--- 76
G ++QV A D D G G V Y +++ NT+ F +D P + P
Sbjct: 2170 GTDIIQVFAADGDEGTNGQVRYGIVNGNTNQE--FRIDSVTGAITVAKPLDREKTPTYHL 2227
Query: 77 ----QDEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDA 128
D G + T+TV+I + DIND P F+ PY +VPE L + +V A D
Sbjct: 2228 TVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPENLGTLPRTILQVVARDD 2287
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D+G N+ + Y + ED F + A +G++ ++LD E ++ ++
Sbjct: 2288 DQGSNSKLSYVLFGGNEDNAFTLSA-SGELGVTQSLDRETKERFV 2331
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +ATD DSG +EY LL+ + S +D G + D
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATD 2128
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y+ + E G + +V A D DEG N
Sbjct: 2129 KGQPSLSSSTEVVVVVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQ 2188
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y + + F +D+ TG I K LD EK Y
Sbjct: 2189 VRYGIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTY 2225
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 31/135 (22%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G ++ V A+D D+ ++ YR++ N S F ++P+T G I
Sbjct: 2380 GTDVLLVNASDADASTNAVISYRIIGGN----SQFTINPST---GQIITSALLDRETKDN 2432
Query: 77 -------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHA 125
D G LSS+ +V + VTD+ND P FQ PY +P G V V
Sbjct: 2433 YTLVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSFVFAVTV 2492
Query: 126 TDADEGQNAVVYYSV 140
TDAD G N+ ++YS+
Sbjct: 2493 TDADIGPNSELHYSL 2507
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1724 AEVEITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTYTIISGA 1783
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ + LD E++ Y
Sbjct: 1784 DDSFRIDPESGDLIATRRLDRERRSKY 1810
Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 70/164 (42%), Gaps = 35/164 (21%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--DEGGLS---------- 83
+ ATD DSG + Y ++ N +F++ +EH G + GGL
Sbjct: 497 ISATDGDSGLNANLRYSIVSGN--GLGWFHI---SEHSGLVTTGSSGGLDRELASQIVLN 551
Query: 84 ------------STATVNIRVTDINDKNPEF-QSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
S A + + + D+ND+ P F Q Y+ SV E G + + ATD D
Sbjct: 552 ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLMLRATDGD 611
Query: 130 EGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V +S+ E F +D +G + T +LD E+Q Y
Sbjct: 612 LGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFY 655
Score = 42.4 bits (98), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
G ++ VNI V D+ND +P F Q++ V Q G ++ + A D DEG N +V Y
Sbjct: 871 GTVTGDTMVNITVKDLNDNSPHFLQAIESVNVVENWQAGHSIFQAKAVDPDEGVNGMVLY 930
Query: 139 SV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
S+ P+++ F ++ G I LD +E
Sbjct: 931 SLKQNPKNL-FTINEKNGTISLLGPLDVHAGSYQIE 965
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
SS ++I V D+ND P F+ P+ + E + V A D D G N + Y +
Sbjct: 2651 FSSYEKLDITVLDVNDNAPIFKEDPFISEILENLSPRKILTVSAMDKDSGPNGQLDYEIV 2710
Query: 142 E---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ F ++ TG+IR+ + LD EK Y+
Sbjct: 2711 NGNMENSFSINHATGEIRSVRPLDREKVSHYV 2742
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 68/174 (39%), Gaps = 20/174 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G V+Y + + ++ LD
Sbjct: 694 YFAHIKENEPGGSYITTVSATDPDLGTNGTVKYSISAGDRSRFQVNAQSGVISTRMALDR 753
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V I V D D P F + Y F V E G VG
Sbjct: 754 EEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFENVALGYHVG 813
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A+ D N + Y D F ++ TG + T +D E+Q Y +V
Sbjct: 814 SVSASTMDLNSN-ISYLITTGDQKGMFAINQVTGQLTTANVIDREEQSFYQLKV 866
Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N + Y + +
Sbjct: 1515 VTILVTDLNDNVPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEIEYEIINGDTDT 1574
Query: 146 FVVDANTGDIRTNKAL 161
F+VD +GD+R AL
Sbjct: 1575 FIVDRYSGDLRVASAL 1590
Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG + Y + N F++ P T E Q
Sbjct: 1329 RIGELVSSVTATDSDSGDNADLYYSITGTNNHGT--FSISPNTGSIFLAKKLDFETQSLY 1386
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G SST +V I V D ND P F S+ E G +V V A D
Sbjct: 1387 KLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVTAHD 1446
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + Y++ + +P F +D G I TN +D E L+
Sbjct: 1447 PDADINGQLSYTIIQQMPRGNHFTIDEVKGTIYTNAEIDREFANLF 1492
Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 55/123 (44%), Gaps = 5/123 (4%)
Query: 59 DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
++ S++NL H P +STA V+I + D+ND P F S P +PE
Sbjct: 2009 ESQSFYNL-VVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLS-PKLTYIPENTPID 2066
Query: 118 LAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
V + ATD D G N+ + Y++ P F + G++R LD E+ Y V
Sbjct: 2067 TVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2126
Query: 176 ISK 178
K
Sbjct: 2127 TDK 2129
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNAVVYYSV 140
SS A++ I V DIND P F Y ++ E G V + ATD D G NA + YS+
Sbjct: 456 SSVASLVIFVNDINDHPPVFSQQVYRVNLSEEAPPGSYVSGISATDGDSGLNANLRYSI 514
>gi|410334089|gb|JAA35991.1| dachsous 1 [Pan troglodytes]
Length = 3298
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 82/162 (50%), Gaps = 28/162 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGP- 75
G +++V A D D G G V Y L +F++DP + E Q
Sbjct: 489 GSFVVRVTARDPDQGTNGQVTYSLAPGAH--THWFSIDPTSGIITTAASLDYELEPQPQL 546
Query: 76 --IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ +GGL +S+ATV++ + D+ND P+FQ Y S+PEG Q G +V ATDAD
Sbjct: 547 TVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDAD 606
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEK 165
G ++ YS+ + PF +DA++GD+ T + LD ++
Sbjct: 607 SGPFGLLSYSLGAGLGSSGSPPFRIDAHSGDVCTTRTLDRDQ 648
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 78/177 (44%), Gaps = 27/177 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + R+ G +L+ ++ATD D G G V Y + + + F+LDP T
Sbjct: 1654 YSVLLRENSPPGTSLLTLRATDPDVGANGQVTYGGVSSES-----FSLDPDTGVLTTLRA 1708
Query: 71 ---EHQGPI------QDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQDGLA 119
E Q I QD G V +RV D ND P F S VPEGQD
Sbjct: 1709 LDREEQEEIILTVYAQDRGSPPRLTHVTVRVAVEDENDHAPTFGSAHLSLEVPEGQDPQT 1768
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ + A+D D G N + Y + + P FV+D +G+ T + LD E + + R+
Sbjct: 1769 LTMLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQLRI 1825
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 21/147 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNT--DAASYFNLDPAT-----------EHQGPI 76
G + + A D D+G FG + Y LL+ + F L+ +T EH
Sbjct: 2722 GTLVTTLHAIDGDAGAFGRLRYSLLEAGPGPEGREAFALNSSTGELRARVPFDYEHTESF 2781
Query: 77 Q------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ D G LS++ TV++ VT ++ +P F + + F VPEG + G ++G V ATD D
Sbjct: 2782 RLLVGAADAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQVPEGARRGHSLGHVQATDED 2841
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDI 155
G + +V YS+ P F ++ TG +
Sbjct: 2842 GGADGLVLYSLATSSPYFGINQTTGAL 2868
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 64/146 (43%), Gaps = 26/146 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY--------------RLLDNNTDAASY 63
FY A + + G +QV ATD DSG FGL+ Y R+ ++ D +
Sbjct: 582 FYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGSSGSPPFRIDAHSGDVCTT 641
Query: 64 FNLDPATEHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEG 114
LD QGP D GGL S V + ++D ND P+F Y S+ +
Sbjct: 642 RTLD---RDQGPSSFDFTVTAVDGGGLKSMVYVKVFLSDENDNRPQFYPREYAASISAQS 698
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV 140
G AV R+ A D D+G + + Y +
Sbjct: 699 PPGTAVLRLRAHDPDQGSHGRLSYHI 724
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL---------------DPATEHQGPI 76
TL ++A+D D G G ++YR+LD + A +L +PA + +
Sbjct: 1768 TLTMLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQLRIEA 1827
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQN 133
D G LS+T + + V D ND P F Y VPE G + ++ A D D G N
Sbjct: 1828 WDGGQPALSATLLLTVTVLDANDHAPAFPVPAYSVEVPEDVPAGTLLLQLQAHDPDAGAN 1887
Query: 134 AVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSYL 184
V Y + F+++ ++G++RT ALD E+ Y V + A L
Sbjct: 1888 GHVTYYLGAGTAGAFLLEPSSGELRTAAALDREQCPSYTFSVSAVDGAAAGPL 1940
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 28/167 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQ 73
+G L+ V+A+D D G GLV + + ++ D + F LD ++ HQ
Sbjct: 2617 VGAELLHVEASDADPGPHGLVRFTV--SSGDPSGLFELDESSGTLRLAHALDCETQARHQ 2674
Query: 74 GPIQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
+Q G + A V I V D+ND P F S+ E Q G V +HA D D
Sbjct: 2675 LVVQAADPAGAHFALAPVTIEVQDVNDHGPAFPLNLLSTSLAENQPPGTLVTTLHAIDGD 2734
Query: 130 EGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYEKQQLY 169
G + YS+ E P F ++++TG++R DYE + +
Sbjct: 2735 AGAFGRLRYSLLEAGPGPEGREAFALNSSTGELRARVPFDYEHTESF 2781
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 67/158 (42%), Gaps = 30/158 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPI--- 76
G L+Q++A D D+G G V Y L A F L+P++ Q P
Sbjct: 1871 GTLLLQLQAHDPDAGANGHVTYYL---GAGTAGAFLLEPSSGELRTAAALDREQCPSYTF 1927
Query: 77 -------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-----GQDGLAVGRVH 124
G LS+T +V I V D+ND P F + P +P LA+ +
Sbjct: 1928 SVSAVDGAAAGPLSTTVSVTITVRDVNDHAPTFPTSPLRLRLPRPGPSFSTPTLALATLR 1987
Query: 125 ATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKA 160
A D D G NA + Y + P VD+ TG+IR ++
Sbjct: 1988 AEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARS 2025
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 73/167 (43%), Gaps = 32/167 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQ----- 73
G ++QV+A D G + Y L A+S F L+P + E Q
Sbjct: 1016 GTQVLQVQAQAPDGGP---ITYHLAAEG--ASSPFGLEPQSGWLWVRAALDREAQELYIL 1070
Query: 74 ------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
G + G + TATV + + + N+ +P P +V E Q G +VGRV AT
Sbjct: 1071 KVMAVSGSKAELGQQTGTATVRVSILNQNEHSPRLSEDPTFLAVAENQPPGTSVGRVFAT 1130
Query: 127 DADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
D D G N + YS+ + F + TG++ T + LD E+Q Y
Sbjct: 1131 DRDSGPNGRLTYSLQQLSEDSKAFRIHPQTGEVTTLQTLDREQQSSY 1177
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 74/167 (44%), Gaps = 27/167 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYFN-LDP----------- 68
G + V A D D G+ V YRL L ++T A S LD
Sbjct: 1561 GPAALHVVARDPDLGEAARVSYRLASGGDGHFRLHSSTGALSVVRPLDREQRAEHVLTVV 1620
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
A++H P + S+T + + V D+ND+ P FQ Y + E G ++ + ATD
Sbjct: 1621 ASDHGSPPR-----SATQVLTVSVADVNDEAPTFQQQEYSVLLRENSPPGTSLLTLRATD 1675
Query: 128 ADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
D G N V Y F +D +TG + T +ALD E+Q+ + V+
Sbjct: 1676 PDVGANGQVTYGGVSSESFSLDPDTGVLTTLRALDREEQEEIILTVY 1722
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A +++ + DIND P F Y V E G V +V A+DAD G N V Y +
Sbjct: 239 ALLDVTLLDINDHAPAFNQSRYHAVVSESLAPGSPVLQVFASDADAGVNGAVTYEINRRQ 298
Query: 143 ---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D PF +DA+TG ++ + LD+E+++++
Sbjct: 299 SEGDGPFSIDAHTGLLQLERPLDFEQRRVH 328
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 76/176 (43%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------P 68
Y A + G +++++A D D G G + Y +L N+ F LD P
Sbjct: 690 YAASISAQSPPGTAVLRLRAHDPDQGSHGRLSYHILAGNS--PPLFTLDEQSGLLTVAWP 747
Query: 69 ATEHQGPI-------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGL 118
+ QD GGL + +A VNI + P F+ L Y FSVPE G
Sbjct: 748 LARRANSVVQLEIGAQDGGGLQAEPSARVNISIVPGTPTPPIFEQLQYVFSVPEDVAPGT 807
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
+VG V A + G+ A V S+ P F +DA +G ++T + LD E LE
Sbjct: 808 SVGIVQAHNP-PGRLAPVTLSLSGGDPRGLFSLDAVSGLLQTLRPLDRELLGPVLE 862
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 72/172 (41%), Gaps = 29/172 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH----------QGPIQD- 78
G + ++A D DSG V + LL A F +DP T H GP D
Sbjct: 910 GTPIYTLRALDPDSGVNSRVTFTLLAGGGGA---FTVDPTTGHVRLMRPLGPSGGPAHDL 966
Query: 79 -----EGG---LSSTATVNIRVTDINDKN--PEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+GG +S + + V D+ + P F S Y +P G G V +V A
Sbjct: 967 ELEARDGGSPPRTSHFRLRVVVQDVGTRGLAPRFNSPTYRVDLPSGTTAGTQVLQVQAQA 1026
Query: 128 ADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D G + Y+ E PF ++ +G + ALD E Q+LY+ +V +S
Sbjct: 1027 PDGG--PITYHLAAEGASSPFGLEPQSGWLWVRAALDREAQELYILKVMAVS 1076
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 78/172 (45%), Gaps = 35/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G ++ +V ATD+DSG G + Y L + D+ + F + P T E Q
Sbjct: 1121 GTSVGRVFATDRDSGPNGRLTYSLQQLSEDSKA-FRIHPQTGEVTTLQTLDREQQSSYQL 1179
Query: 76 ---IQDEGG--LSSTATVNIRVTDINDKNPEF--------QSLPYEF--SVPEGQDGLAV 120
+QD G S+T TV++ V D+ND +P F LP + VP G V
Sbjct: 1180 LVQVQDGGSPPRSTTGTVHVAVLDLNDNSPTFLQASGAAGGGLPIQVPDRVPPGT---LV 1236
Query: 121 GRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ A D DEG+N + Y++ P F + ++G++ T L ++ Y+
Sbjct: 1237 TTLQAKDPDEGENGTILYTLTGPGSELFSLHPHSGELLTAAPLIRAERPHYV 1288
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 70/180 (38%), Gaps = 39/180 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + L L+QV+A D D G G + Y L + A F++DP
Sbjct: 2176 YVAFLPESRPLEGPLLQVEADDLDQGSGGQISYSLAASQP-ARGLFHVDPTTGTITTTAI 2234
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
AT+ P L +AT+ + V D ND P P+E V E
Sbjct: 2235 LDREIWAETRLVLMATDRGSP-----ALVGSATLTVMVIDTNDNRPTIPQ-PWELRVSED 2288
Query: 114 GQDGLAVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + +V D D G V++Y S P+D PF V G + LD+E+ Y
Sbjct: 2289 ALLGSEIAQVTGNDVDSG--PVLWYVLSPSGPQD-PFSVGRYGGRVSLTGPLDFEQCDRY 2345
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------- 68
Y M + G ++ V ATD+DSG G + Y L A F++DP
Sbjct: 2380 LYQVMLLEHTPPGSAILSVSATDRDSGANGHISYHL----ASPADGFSVDPNNGTLFTIV 2435
Query: 69 ---ATEHQGP--------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG- 114
A H G +D G G ++ ATV++++ D ND P F Y +V E
Sbjct: 2436 GTVALGHDGSGAVDVVLEARDHGAPGRAARATVHVQLQDQNDHAPSFTLSHYRVAVTEDL 2495
Query: 115 QDGLAVGRVHATDADEGQ-NAVVYYSV 140
G + + ATDAD + +A V YS+
Sbjct: 2496 PPGSTLLTLEATDADGSRSHAAVDYSI 2522
Score = 42.7 bits (99), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 72/178 (40%), Gaps = 40/178 (22%)
Query: 30 GVTLMQVKATDKDSGK-FGLVEYRLLDNNTDAASYFNLDP----ATEHQGPIQDEGGL-- 82
G TL+ ++ATD D + V+Y ++ N F L+P A E GP G
Sbjct: 2498 GSTLLTLEATDADGSRSHAAVDYSIISGNW--GRVFQLEPRLAEAGESAGPGPRALGCLV 2555
Query: 83 ---------------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
SS V + V D+ND P F Y +VPE
Sbjct: 2556 LLEPLDFESLTQYNLTVAAADRGQPPQSSVVPVTVTVLDVNDNPPVFTRASYRVAVPEDT 2615
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
G + V A+DAD G + +V ++V P F +D ++G +R ALD E Q +
Sbjct: 2616 PVGAELLHVEASDADPGPHGLVRFTVSSGDPSGLFELDESSGTLRLAHALDCETQARH 2673
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 15/93 (16%)
Query: 82 LSSTATVNIRVTDINDKNPEF-------QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
L + A + +TD+ND P F + LP E ++P G V RV A D D+G N
Sbjct: 452 LRAEAAFVLHITDVNDNAPAFDRQLYRPEPLP-EVALP----GSFVVRVTARDPDQGTNG 506
Query: 135 VVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
V YS+ F +D +G I T +LDYE
Sbjct: 507 QVTYSLAPGAHTHWFSIDPTSGIITTAASLDYE 539
Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD-EGQNAVVYYSVPEDIP 145
V ++V D N+ P F P ++PE + G A+ A+DAD G N+ V Y + P
Sbjct: 1422 VQVQVQDENEHAPAFARDPLALALPENPEPGAALYTFRASDADGPGPNSDVRYRLLRQEP 1481
Query: 146 FV----VDANTGDIRTNKALDYEKQQLYL 170
V +DA TG + + LD E L
Sbjct: 1482 PVPALRLDARTGALSAPRGLDRETTPALL 1510
>gi|442623252|ref|NP_001260871.1| starry night, isoform F [Drosophila melanogaster]
gi|440214275|gb|AGB93404.1| starry night, isoform F [Drosophila melanogaster]
Length = 3648
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------- 68
S Y A + +G +++QV A+D D G G ++Y L D + + S F +DP
Sbjct: 1009 SPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGS-FVIDPTSGTIRT 1067
Query: 69 ---------ATEHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
A H I + G LSST V IR+ D+ND P F S VPE
Sbjct: 1068 NKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSP 1127
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV 140
G VG +HA D DEG NAVV+YS+
Sbjct: 1128 VGSVVGEIHAHDPDEGVNAVVHYSI 1152
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 83/178 (46%), Gaps = 27/178 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPATEH--- 72
Y A + +G T++ V ATD D G + Y L + N + F+++P T
Sbjct: 902 YSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVT 961
Query: 73 QGPIQDE-------------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
P+ E GG LS T V I VTD+ND P F+S Y+ S+ E
Sbjct: 962 NAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDAL 1021
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G +V +V A+D D G N + Y + ED FV+D +G IRTNK LD E ++
Sbjct: 1022 VGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVF 1079
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 83/191 (43%), Gaps = 44/191 (23%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--------FNLDPAT 70
+ A R+ +G T++ ++ATD+D GK +EY + + TD A F +D
Sbjct: 469 FEASIREGATVGSTVITLRATDQDIGKNAEIEYGI-EAVTDGAGLAQDQEMPIFRID--- 524
Query: 71 EHQGPIQDEGGL-------------------------SSTATVNIRVTDINDKNPEFQSL 105
G I L ++TA+V ++V D ND P+F
Sbjct: 525 SRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSER 584
Query: 106 PYEFSVPEGQDG----LAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTN 158
Y VPE Q G V + ATDAD+G NA + Y++ F +D+ +GD+
Sbjct: 585 TYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLV 644
Query: 159 KALDYEKQQLY 169
K LDYE + Y
Sbjct: 645 KPLDYESVRSY 655
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 55/102 (53%), Gaps = 9/102 (8%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG S TATV+I +TD N+ P F++ PY SV E G V V ATD+D G NA +
Sbjct: 873 DSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQI 932
Query: 137 YYSVPEDI--------PFVVDANTGDIRTNKALDYEKQQLYL 170
YS+ E+ PF ++ TG I TN LD E YL
Sbjct: 933 TYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYL 974
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 25/158 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------- 76
T+ ++ATD D G + Y ++ NT S F++D + +
Sbjct: 602 TVAHIRATDADQGNNAAIRYAIIGGNTQ--SQFSIDSMSGDVSLVKPLDYESVRSYRLVI 659
Query: 77 --QDEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
QD G S + T + V D ND P F + ++ SV E G + RV A D+DEG
Sbjct: 660 RAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEG 719
Query: 132 QNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQ 166
NA + YS+ E + P VD TG ++T K LD E+Q
Sbjct: 720 ANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQ 757
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
S T T+ + V D ND +P F++ +E S+ EG G V + ATD D G+NA + Y +
Sbjct: 445 SGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIE 504
Query: 142 -----------EDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+++P F +D+ +G I T +LD E Y
Sbjct: 505 AVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSY 544
Score = 43.1 bits (100), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 29/167 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP-- 75
+G +++V+A D D G + Y + + + + +DP T E QG
Sbjct: 704 VGYNIIRVQAYDSDEGANAEITYSISERDDNFP--LAVDPRTGWVQTIKPLDREEQGRFA 761
Query: 76 ---IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDA 128
+ +GG+ S++++V I V D+ND +P F YE +V E Q G V V ATD
Sbjct: 762 FQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDP 821
Query: 129 DEGQNAVVYYSVPEDIP---FVVDANTGD--IRTNKALDYEKQQLYL 170
DE ++ ++Y + F + + G I ++LDY++++ +L
Sbjct: 822 DE--DSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFL 866
>gi|397496709|ref|XP_003819172.1| PREDICTED: protocadherin-16 [Pan paniscus]
Length = 3300
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 82/162 (50%), Gaps = 28/162 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGP- 75
G +++V A D D G G V Y L +F++DP + E Q
Sbjct: 609 GSFVVRVTARDPDQGTNGQVTYSLAPGAH--THWFSIDPTSGIITTAASLDYELEPQPQL 666
Query: 76 --IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ +GGL +S+ATV++ + D+ND P+FQ Y S+PEG Q G +V ATDAD
Sbjct: 667 TVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDAD 726
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEK 165
G ++ YS+ + PF +DA++GD+ T + LD ++
Sbjct: 727 SGPFGLLSYSLGAGLGSSGSPPFHIDAHSGDVCTTRTLDRDQ 768
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 78/177 (44%), Gaps = 27/177 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + R+ G +L+ ++ATD D G G V Y + + + F+LDP T
Sbjct: 1656 YSVLLRENSPPGTSLLTLRATDPDVGANGQVTYGGVSSES-----FSLDPDTGVLTTLRA 1710
Query: 71 ---EHQGPI------QDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQDGLA 119
E Q I QD G V IRV D ND P F S VPEGQD
Sbjct: 1711 LDREEQEEIILTVYAQDRGSPPRLTHVTIRVAVEDENDHAPTFGSAHLSLEVPEGQDPQT 1770
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ + A+D D G N + Y + + P FV+D +G+ T + LD E + + R+
Sbjct: 1771 LTMLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQLRI 1827
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 21/147 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNT--DAASYFNLDPAT-----------EHQGPI 76
G + + A D D+G FG + Y LL+ + F L+ +T EH
Sbjct: 2724 GTLVTTLHAIDGDAGAFGRLRYSLLEAGPGPEGREAFALNSSTGELRARVPFDYEHTESF 2783
Query: 77 Q------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ D G LS++ TV++ VT ++ +P F + + F VPEG + G ++G V ATD D
Sbjct: 2784 RLLVGAADAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQVPEGARRGHSLGHVQATDED 2843
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDI 155
G + +V YS+ P F ++ TG +
Sbjct: 2844 GGADGLVLYSLATSSPYFGINQTTGAL 2870
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 64/143 (44%), Gaps = 20/143 (13%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-NTDAASYFNLDPAT------ 70
FY A + + G +QV ATD DSG FGL+ Y L + + F++D +
Sbjct: 702 FYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGSSGSPPFHIDAHSGDVCTT 761
Query: 71 ----EHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDG 117
QGP D GGL S V + ++D ND P+F Y S+ + G
Sbjct: 762 RTLDRDQGPSSFDFTVTAVDGGGLKSMVYVKVFLSDENDNRPQFYPREYAASISAQSPPG 821
Query: 118 LAVGRVHATDADEGQNAVVYYSV 140
AV R+ A D D+G + + Y +
Sbjct: 822 TAVLRLRAHDPDQGSHGRLSYHI 844
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL---------------DPATEHQGPI 76
TL ++A+D D G G ++YR+LD + A +L +PA + +
Sbjct: 1770 TLTMLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQLRIEA 1829
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQN 133
D G LS+T + + V D ND P F Y VPE G + ++ A D D G N
Sbjct: 1830 WDGGQPALSATLLLTVTVLDANDHAPAFPVPAYSVEVPEDVPAGTLLLQLQAHDPDAGAN 1889
Query: 134 AVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSYL 184
V Y + F+++ ++G++RT ALD E+ Y V + A L
Sbjct: 1890 GHVTYYLGAGTAGAFLLEPSSGELRTAAALDREQCPSYTFSVSAVDGAAAGPL 1942
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 28/167 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQ 73
+G L+ V+A+D D G GLV + + ++ D + F LD ++ HQ
Sbjct: 2619 VGAELLHVEASDADPGPHGLVRFTV--SSGDPSGLFELDESSGTLRLAHALDCETQARHQ 2676
Query: 74 GPIQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
+Q G + A V I V D+ND P F S+ E Q G V +HA D D
Sbjct: 2677 LVVQAADPAGAHFALAPVTIEVQDVNDHGPAFPLNLLSTSLAENQPPGTLVTTLHAIDGD 2736
Query: 130 EGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYEKQQLY 169
G + YS+ E P F ++++TG++R DYE + +
Sbjct: 2737 AGAFGRLRYSLLEAGPGPEGREAFALNSSTGELRARVPFDYEHTESF 2783
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 67/158 (42%), Gaps = 30/158 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPI--- 76
G L+Q++A D D+G G V Y L A F L+P++ Q P
Sbjct: 1873 GTLLLQLQAHDPDAGANGHVTYYL---GAGTAGAFLLEPSSGELRTAAALDREQCPSYTF 1929
Query: 77 -------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-----GQDGLAVGRVH 124
G LS+T +V I V D+ND P F + P +P LA+ +
Sbjct: 1930 SVSAVDGAAAGPLSTTVSVTITVRDVNDHAPTFPTSPLRLRLPRPGPSFSTPTLALATLR 1989
Query: 125 ATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKA 160
A D D G NA + Y + P VD+ TG+IR ++
Sbjct: 1990 AEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARS 2027
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 74/167 (44%), Gaps = 27/167 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYFN-LDP----------- 68
G + V A D D G+ V YRL L ++T A S LD
Sbjct: 1563 GPAALHVVARDPDLGEAARVSYRLASGGDGHFRLHSSTGALSVVRPLDREQRAEHVLTVV 1622
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
A++H P + S+T + + V D+ND+ P FQ Y + E G ++ + ATD
Sbjct: 1623 ASDHGSPPR-----SATQVLTVSVADVNDEAPTFQQQEYSVLLRENSPPGTSLLTLRATD 1677
Query: 128 ADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
D G N V Y F +D +TG + T +ALD E+Q+ + V+
Sbjct: 1678 PDVGANGQVTYGGVSSESFSLDPDTGVLTTLRALDREEQEEIILTVY 1724
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 32/167 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQ----- 73
G ++QV+A D G + Y L A+S F L+P + E Q
Sbjct: 1136 GTQVLQVQAQAPDGGP---ITYHLAAEG--ASSPFGLEPQSGWLWVRAALDREAQELYIL 1190
Query: 74 ------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
G + G + TATV + + + N+ +P P ++ E Q G +VGRV AT
Sbjct: 1191 KVMAVSGSKAELGQQTGTATVRVSILNQNEHSPRLSEDPTFLAMAENQPPGTSVGRVFAT 1250
Query: 127 DADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
D D G N + YS+ + F + TG++ T + LD E+Q Y
Sbjct: 1251 DRDSGPNGRLTYSLQQLSEDSKAFRIHPQTGEVTTLQTLDREQQSSY 1297
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A +++ + DIND P F Y V E G V +V A+DAD G N V Y +
Sbjct: 359 ALLDVTLLDINDHAPAFNQSRYHAVVSESLAPGSPVLQVFASDADAGVNGAVTYEINRRQ 418
Query: 143 ---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D PF +DA+TG ++ + LD+E+++++
Sbjct: 419 SEGDGPFSIDAHTGLLQLERPLDFEQRRVH 448
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 76/176 (43%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------P 68
Y A + G +++++A D D G G + Y +L N+ F LD P
Sbjct: 810 YAASISAQSPPGTAVLRLRAHDPDQGSHGRLSYHILAGNS--PPLFTLDEQSGLLTVAWP 867
Query: 69 ATEHQGPI-------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGL 118
+ QD GGL + +A VNI + P F+ L Y FSVPE G
Sbjct: 868 LARRANSVVQLEIGAQDGGGLQAEPSARVNISIVPGTPTPPIFEQLQYVFSVPEDVAPGT 927
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
+VG V A + G+ A V S+ P F +DA +G ++T + LD E LE
Sbjct: 928 SVGIVQAHNP-PGRLAPVTLSLSGGDPRGLFSLDAVSGLLQTLRPLDRELLGPVLE 982
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 87/191 (45%), Gaps = 37/191 (19%)
Query: 11 EMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT 70
++ D F AMA ++ G ++ +V ATD+DSG G + Y L + D+ + F + P T
Sbjct: 1224 RLSEDPTFL-AMAENQPP-GTSVGRVFATDRDSGPNGRLTYSLQQLSEDSKA-FRIHPQT 1280
Query: 71 -----------EHQGP------IQDEGG--LSSTATVNIRVTDINDKNPEF--------Q 103
E Q +QD G S+T TV++ V D+ND +P F
Sbjct: 1281 GEVTTLQTLDREQQSSYQLLVQVQDGGSPPRSTTGTVHVAVLDLNDNSPTFLQASGAAGG 1340
Query: 104 SLPYEF--SVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNK 159
LP + VP G V + A D DEG+N + Y++ P F + ++G++ T
Sbjct: 1341 GLPIQVPDRVPPGT---LVTTLQAKDPDEGENGTILYTLTGPGSELFSLHPHSGELLTAA 1397
Query: 160 ALDYEKQQLYL 170
L ++ Y+
Sbjct: 1398 PLIRAERPHYV 1408
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 72/172 (41%), Gaps = 29/172 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH----------QGPIQD- 78
G + ++A D DSG V + LL A F +DP T H GP D
Sbjct: 1030 GTPIYTLRALDPDSGVNSRVTFTLLAGGGGA---FTVDPTTGHVRLMRPLGPSGGPAHDL 1086
Query: 79 -----EGG---LSSTATVNIRVTDINDKN--PEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+GG +S + + V D+ + P F S Y +P G G V +V A
Sbjct: 1087 ELEARDGGSPPRTSHFRLRVVVQDVGTRGLAPRFNSPTYRVDLPSGTTAGTQVLQVQAQA 1146
Query: 128 ADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D G + Y+ E PF ++ +G + ALD E Q+LY+ +V +S
Sbjct: 1147 PDGG--PITYHLAAEGASSPFGLEPQSGWLWVRAALDREAQELYILKVMAVS 1196
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 70/180 (38%), Gaps = 39/180 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + L L+QV+A D D G G + Y L + A F++DP
Sbjct: 2178 YVAFLPESRPLEGPLLQVEADDLDQGSGGQISYSLAASQP-ARGLFHVDPTTGTITTTAI 2236
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
AT+ P L +AT+ + V D ND P P+E V E
Sbjct: 2237 LDREIWAETRLVLMATDRGSP-----ALVGSATLTVMVIDTNDNRPTIPQ-PWELRVSED 2290
Query: 114 GQDGLAVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + +V D D G V++Y S P+D PF V G + LD+E+ Y
Sbjct: 2291 ALLGSEIAQVTGNDVDSG--PVLWYVLSPSGPQD-PFSVGRYGGRVSLTGPLDFEQCDRY 2347
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------- 68
Y M + G ++ V ATD+DSG G + Y L A F++DP
Sbjct: 2382 LYQVMLLEHTPPGSAILSVSATDRDSGANGHISYHL----ASPADGFSVDPNNGTLFTIV 2437
Query: 69 ---ATEHQGP--------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG- 114
A H G +D G G ++ ATV++++ D ND P F Y +V E
Sbjct: 2438 GTVALGHDGSGAVDVVLEARDHGAPGRAARATVHVQLQDQNDHAPSFTLSHYRVAVTEDL 2497
Query: 115 QDGLAVGRVHATDADEGQ-NAVVYYSV 140
G + + ATDAD + +A V YS+
Sbjct: 2498 PPGSTLLTLEATDADGSRSHAAVDYSI 2524
Score = 42.7 bits (99), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 72/178 (40%), Gaps = 40/178 (22%)
Query: 30 GVTLMQVKATDKDSGK-FGLVEYRLLDNNTDAASYFNLDP----ATEHQGPIQDEGGL-- 82
G TL+ ++ATD D + V+Y ++ N F L+P A E GP G
Sbjct: 2500 GSTLLTLEATDADGSRSHAAVDYSIISGNW--GRVFQLEPRLAEAGESAGPGPRALGCLV 2557
Query: 83 ---------------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
SS V + V D+ND P F Y +VPE
Sbjct: 2558 LLEPLDFESLTQYNLTVAAADRGQPPQSSVVPVTVTVLDVNDNPPVFTRASYRVAVPEDT 2617
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
G + V A+DAD G + +V ++V P F +D ++G +R ALD E Q +
Sbjct: 2618 PVGAELLHVEASDADPGPHGLVRFTVSSGDPSGLFELDESSGTLRLAHALDCETQARH 2675
Score = 42.4 bits (98), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 15/93 (16%)
Query: 82 LSSTATVNIRVTDINDKNPEF-------QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
L + A + VTD+ND P F + LP E ++P G V RV A D D+G N
Sbjct: 572 LRAEAAFVLHVTDVNDNAPAFDRQLYRPEPLP-EVALP----GSFVVRVTARDPDQGTNG 626
Query: 135 VVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
V YS+ F +D +G I T +LDYE
Sbjct: 627 QVTYSLAPGAHTHWFSIDPTSGIITTAASLDYE 659
>gi|297674308|ref|XP_002815174.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Pongo abelii]
Length = 5022
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 83/170 (48%), Gaps = 22/170 (12%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL++Y + N + A + +
Sbjct: 3138 ATIPESHSIGSIVRTVSARDRDAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYE 3197
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
+H+ I D G ++ T +V + V D+ND +P F S Y +V E G V
Sbjct: 3198 LCQKHEMTISAIDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIH 3257
Query: 123 VHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y++ D+ FV+D NTG I T LD+E +Q Y
Sbjct: 3258 LNATDADSGTNAVIAYTIQSSDSDL-FVIDPNTGVITTQGFLDFETKQSY 3306
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F +DP + E +
Sbjct: 1756 GSKIMQLTAMDADEGANALVTYTIISGADDS---FRIDPESGDLIATRRLDRERRSKYSL 1812
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQ 132
D+G SS +NI V+D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1813 LVRADDGLQSSDMRINITVSDVNDHTPKFSRPVYSFDIPEDTIPGSLVAAILATDDDSGV 1872
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG + LDYE QQ Y+ V
Sbjct: 1873 NGEITYIVNEDDEDGIFFLNPITGVFNLTRLLDYEVQQYYILTV 1916
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 78/166 (46%), Gaps = 23/166 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI----QDEGGL--- 82
G L+ ++ATD D G G V + L + TD S F LDP + I ++E
Sbjct: 599 GTELLMLRATDGDLGDNGTVRFSLQEAETDRRS-FRLDPVSGRLSTISSLDREEQAFYSL 657
Query: 83 ------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
SS A +N+ + DIND +P F + Y + E + G + + V ATD D
Sbjct: 658 LVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKENEPGGSYITTVSATDPD 717
Query: 130 EGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
G N V YS+ + F V+A +G I T ALD E++ Y +V
Sbjct: 718 LGTNGTVKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQV 763
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 75/173 (43%), Gaps = 21/173 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-----------AASYFNL 66
FY A + +++V A+D D G GL+ Y ++ N + A L
Sbjct: 1214 FYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEERQFAIDSTSGQVALIGKL 1273
Query: 67 D----PATEHQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
D PA D G L+ST T+NI + D ND P F V E + G
Sbjct: 1274 DYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGEL 1333
Query: 120 VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD+D G NA +YYS+ F + NTG I K LD+E Q LY
Sbjct: 1334 VSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGSIFLAKKLDFETQSLY 1386
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 24/162 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V A DKDSG G ++Y +++ N + + F+++ AT I+
Sbjct: 2729 ILTVSAMDKDSGPNGQLDYEIVNGNMENS--FSINHATGEIRSIRPLDREKVSHYVLTIK 2786
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G S + +V I + D ND P F + + VPE G V RV +D D G
Sbjct: 2787 SSDKGSPSQSTSVKVMINILDENDNAPRFSQI-FSAHVPENSPLGYTVTRVTTSDEDIGI 2845
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA+ YS+ + +PF ++ +TGDI ++ L+ E Y RV
Sbjct: 2846 NAISRYSIMDTSLPFTINPSTGDIIISRPLNREDTDRYRIRV 2887
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 22/168 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y ++D + F ++P+T
Sbjct: 2816 SQIFSAHVPENSPLGYTVTRVTTSDEDIGINAISRYSIMDTSLP----FTINPSTGDIII 2871
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V I VTD+ND P F Y PE + G
Sbjct: 2872 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPELTEIGS 2931
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
V +V ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 2932 KVTQVFATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQILKYQN 2979
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 38 ATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGGLSSTAT--- 87
ATD D G G+ YR++ N A F LD G + +GGL T
Sbjct: 159 ATDSDIGSNGVDHRSYRIIRGN--EAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQY 216
Query: 88 -------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
VN+ V DIND P F S Y+ VPE G +V +V A D
Sbjct: 217 QLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAAD 276
Query: 128 ADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ADEG NA + Y + E PF +D TG I + LD+E ++ Y
Sbjct: 277 ADEGTNADIRYRLQDEGTPFQMDPETGLITVREPLDFEARRQY 319
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +ATD DSG +EY LL+ + S +D G + D
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATD 2128
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y+ + E G + +V A D DEG N
Sbjct: 2129 KGQQSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQ 2188
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y + + F +D+ TG I K LD EK Y
Sbjct: 2189 VRYGIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTY 2225
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF---NLDPAT 70
D L Y + + +V+A+DKDSG G + Y + + NT DA F L +
Sbjct: 997 DQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGNTGDAFGIFPDGQLYIKS 1056
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E +QD LS+T V + + D+ND P F S Y F E Q G
Sbjct: 1057 ELDRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAG 1116
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
VG+V A D D G N V YS P F + A +G+I D E
Sbjct: 1117 SFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTHQFDRE 1164
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 78/162 (48%), Gaps = 22/162 (13%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQG-- 74
++G LM+V A D KD G VEY + LDN+T S + + +Q
Sbjct: 3039 KVGTKLMKVTAIDDKDFGLNSEVEYFISNDNHLGKFKLDNDTGWISVASSLISDLNQNFF 3098
Query: 75 ---PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D+G LSS ATV+I VT+ N PEF ++PE G V V A D
Sbjct: 3099 ITVTAKDKGNPPLSSQATVHITVTEENYHTPEFSQSHMSATIPESHSIGSIVRTVSARDR 3158
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQ 167
D N ++ YS+ E+ F ++++TG + KALDYE Q
Sbjct: 3159 DAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYELCQ 3200
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L ATV++ + DIND P+F Y+ ++ E L V RV A+D DEG N +++YS+
Sbjct: 1190 LKDQATVHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSI 1249
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E+ F +D+ +G + LDYE Y
Sbjct: 1250 IKGNEERQFAIDSTSGQVALIGKLDYEATPAY 1281
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 75/172 (43%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3252 GTTVIHLNATDADSGTNAVIAYTIQSSDSD---LFVIDPNT---GVITTQGFLDFETKQS 3305
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S ATVN+++ N+ P F S Y F + E G VG V A+
Sbjct: 3306 YHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFAS 3365
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V Y + F ++ TG I + LD EK+ ERV L
Sbjct: 3366 DRDLGTDGEVRYLIFGNSRKKGFQINKKTGQIYVSGILDREKE----ERVSL 3413
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 71/174 (40%), Gaps = 32/174 (18%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPATEHQGPIQ 77
+ + G ++ Q KA D D G G+V Y L N N + L P H G Q
Sbjct: 904 ENWQAGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINEKNGTISLLGPLDVHAGSYQ 963
Query: 78 DE--------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
E LSS+ + + V D+ND +P F L YE ++ E + +V A+D
Sbjct: 964 IEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDK 1023
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYLERV 173
D G N + Y++ E NTGD + LD E Q Y+ V
Sbjct: 1024 DSGANGEIAYTIAE-------GNTGDAFGIFPDGQLYIKSELDRELQDRYVLMV 1070
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYS 139
L+ T T+N+ V D+ND P F S Y ++PE G V V+A+DAD NAV+
Sbjct: 2385 ALTGTGTINVIVDDVNDNVPTFASKAYFTTIPEDAPTGTDVLLVNASDADASMNAVIRI- 2443
Query: 140 VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ + F ++ +TG I T+ LD E + Y
Sbjct: 2444 IGGNSQFTINPSTGQIITSALLDRETKDNY 2473
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1724 AEVEITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTYTIISGA 1783
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ + LD E++ Y
Sbjct: 1784 DDSFRIDPESGDLIATRRLDRERRSKY 1810
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 26/146 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGPI--- 76
G ++QV A D D G G V Y +++ NT+ F +D P + P
Sbjct: 2170 GTDIIQVFAADGDEGTNGQVRYGIVNGNTNQE--FRIDSVTGAITVAKPLDREKTPTYHL 2227
Query: 77 ----QDEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDA 128
D G + T+TV+I + DIND P F+ PY +VPE L + +V A D
Sbjct: 2228 TVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPENLGTLPRTILQVVARDD 2287
Query: 129 DEGQNAVVYYSV---PEDIPFVVDAN 151
D+G N+ + Y + ED F + A+
Sbjct: 2288 DQGSNSKLSYVLFGGNEDSAFTLSAS 2313
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LSS+ +V + VTD+ND P FQ PY +P G V V TDAD G N+ ++YS+
Sbjct: 2488 LSSSTSVLVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSFVFAVTVTDADIGPNSELHYSL 2547
Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 70/164 (42%), Gaps = 35/164 (21%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--DEGGLS---------- 83
+ ATD DSG + Y ++ N +F++ +EH G + GGL
Sbjct: 497 ISATDGDSGLNANLRYSVVSGN--GLGWFHI---SEHSGLVTTGSSGGLDRELASQIVLN 551
Query: 84 ------------STATVNIRVTDINDKNPEF-QSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
S A + + + D+ND+ P F Q Y+ SV E G + + ATD D
Sbjct: 552 ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLMLRATDGD 611
Query: 130 EGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V +S+ E F +D +G + T +LD E+Q Y
Sbjct: 612 LGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFY 655
Score = 42.4 bits (98), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
G ++ VNI V D+ND +P F Q++ V Q G ++ + A D DEG N +V Y
Sbjct: 871 GTVTGDTMVNITVKDLNDNSPHFLQAIESVNVVENWQAGHSIFQAKAVDPDEGVNGMVLY 930
Query: 139 SV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
S+ P+++ F ++ G I LD +E
Sbjct: 931 SLKQNPKNL-FAINEKNGTISLLGPLDVHAGSYQIE 965
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
SS ++I V D+ND P F+ P+ + E + V A D D G N + Y +
Sbjct: 2691 FSSYEKLDITVLDVNDNAPIFKEDPFISEILENLSPRKILTVSAMDKDSGPNGQLDYEIV 2750
Query: 142 E---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ F ++ TG+IR+ + LD EK Y+
Sbjct: 2751 NGNMENSFSINHATGEIRSIRPLDREKVSHYV 2782
Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 68/174 (39%), Gaps = 20/174 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G V+Y + + ++ LD
Sbjct: 694 YFAHIKENEPGGSYITTVSATDPDLGTNGTVKYSISAGDRSRFQVNAQSGVISTRMALDR 753
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V I V D D P F + Y F V E G VG
Sbjct: 754 EEKTAYQLQVVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFENVALGYHVG 813
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A+ D N + Y D F ++ TG + T +D E+Q Y +V
Sbjct: 814 SVSASTMDLNSN-ISYLITTGDQKGMFAINHVTGQLTTANVIDREEQSFYQLKV 866
Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N + Y + +
Sbjct: 1515 VTILVTDLNDNVPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEIEYEIINGDTDT 1574
Query: 146 FVVDANTGDIRTNKAL 161
F+VD +GD+R AL
Sbjct: 1575 FIVDRYSGDLRVASAL 1590
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 55/123 (44%), Gaps = 5/123 (4%)
Query: 59 DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
++ S++NL H P +STA V+I + D+ND P F S P +PE
Sbjct: 2009 ESQSFYNL-VVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLS-PKLTYIPENTPID 2066
Query: 118 LAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
V + ATD D G N+ + Y++ P F + G++R LD E+ Y V
Sbjct: 2067 TVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2126
Query: 176 ISK 178
K
Sbjct: 2127 TDK 2129
Score = 39.7 bits (91), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG + Y + N F++ P T E Q
Sbjct: 1329 RIGELVSSVTATDSDSGDNADLYYSITGTNNHGT--FSISPNTGSIFLAKKLDFETQSLY 1386
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G SST +V I V D ND P F S+ E G +V V A D
Sbjct: 1387 KLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVTAHD 1446
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + Y++ + +P F +D G I TN +D E L+
Sbjct: 1447 PDADINGQLSYTIIQQMPRGNHFTIDEVKGTIYTNAEIDREFANLF 1492
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV 140
SS A++ I V DIND P F Y ++ E G V + ATD D G NA + YSV
Sbjct: 456 SSVASLVIFVNDINDHPPVFSQQVYRVNLSEEAPPGSYVSGISATDGDSGLNANLRYSV 514
>gi|426345436|ref|XP_004040420.1| PREDICTED: protocadherin Fat 4 [Gorilla gorilla gorilla]
Length = 4981
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 83/170 (48%), Gaps = 22/170 (12%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL++Y + N + A + +
Sbjct: 3096 ATIPESHSVGSIVRTVSARDRDAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYE 3155
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
+H+ I D G ++ T +V + V D+ND +P F S Y +V E G V
Sbjct: 3156 LCQKHEMTISAIDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIH 3215
Query: 123 VHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y+V D+ FV+D NTG I T LD+E +Q Y
Sbjct: 3216 LNATDADSGTNAVIAYTVQSSDSDL-FVIDPNTGVITTQGFLDFETKQSY 3264
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F +DP + E +
Sbjct: 1756 GSKIMQLTAMDADEGANALVTYTIISGADDS---FRIDPESGDLIATRRLDRERRSKYSL 1812
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQ 132
D+G SS +NI V+D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1813 LVRADDGLQSSDMRINITVSDVNDHTPKFSRHVYSFDIPEDTIPGSLVAAILATDDDSGV 1872
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG + LDYE QQ Y+ V
Sbjct: 1873 NGEITYIVNEDDEDGIFFLNPITGVFNLTRLLDYEVQQYYILTV 1916
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 78/166 (46%), Gaps = 23/166 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI----QDEGGL--- 82
G L+ ++ATD D G G V + L + TD S F LDP + I ++E
Sbjct: 599 GTELLMLRATDGDLGDNGTVRFSLQEAETDRRS-FRLDPVSGRLSTISSLDREEQAFYSL 657
Query: 83 ------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
SS A +N+ + DIND +P F + Y + E + G + + V ATD D
Sbjct: 658 LVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKENEPGGSYITTVSATDPD 717
Query: 130 EGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
G N V YS+ + F V+A +G I T ALD E++ Y +V
Sbjct: 718 LGTNGTVKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAYQLQV 763
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 75/168 (44%), Gaps = 22/168 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y ++D A+ F ++P+T
Sbjct: 2774 SQIFSAHVPENSPLGYTVTRVTTSDEDIGINAISRYSIMD----ASLPFTINPSTGDIVI 2829
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V I VTDIND P F Y PE + G
Sbjct: 2830 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNAPRFSRTSYYLDCPELTETGS 2889
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
V +V ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 2890 KVTQVFATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQILKYQN 2937
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 75/173 (43%), Gaps = 21/173 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-----------AASYFNL 66
FY A + +++V A+D D G GL+ Y ++ N + A L
Sbjct: 1214 FYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEERQFAIDSTSGQVALIGKL 1273
Query: 67 D----PATEHQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
D PA D G L+ST T+NI + D ND P F V E + G
Sbjct: 1274 DYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGEL 1333
Query: 120 VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD+D G NA +YYS+ F + NTG I K LD+E Q LY
Sbjct: 1334 VSSVTATDSDSGDNADLYYSITGTNNHGTFSISPNTGSIFLAKKLDFETQSLY 1386
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 24/162 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V A DKDSG G ++Y +++ N + + F+++ AT ++
Sbjct: 2687 ILTVSAMDKDSGPNGQLDYEIVNGNMENS--FSINHATGEIRSVRPLDREKVSHYVLTIK 2744
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G S + +V I + D ND P F + + VPE G V RV +D D G
Sbjct: 2745 SSDKGSPSQSTSVKVMINILDENDNAPRFSQI-FSAHVPENSPLGYTVTRVTTSDEDIGI 2803
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA+ YS+ + +PF ++ +TGDI ++ L+ E Y RV
Sbjct: 2804 NAISRYSIMDASLPFTINPSTGDIVISRPLNREDTDRYRIRV 2845
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 38 ATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGGLSSTAT--- 87
ATD D G G+ YR++ N A F LD G + +GGL T
Sbjct: 159 ATDSDIGSNGVDHRSYRIIRGN--EAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQY 216
Query: 88 -------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
VN+ V DIND P F S Y+ VPE G +V +V A D
Sbjct: 217 QLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAAD 276
Query: 128 ADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ADEG NA + Y + E PF +D TG I + LD+E ++ Y
Sbjct: 277 ADEGTNADIRYRLQDEGTPFQMDPETGLITVREPLDFEARRQY 319
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +ATD DSG +EY LL+ + S +D G + D
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATD 2128
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y+ + E G + +V A D DEG N
Sbjct: 2129 KGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQ 2188
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y + + F +D+ TG I K LD EK Y
Sbjct: 2189 VRYGIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTY 2225
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPIQ---- 77
T++QV A D D G + Y L N D A + LD T+ + +
Sbjct: 2278 TILQVVARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELGVTQSLDRETKERFVLMITAT 2337
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNA 134
D G L+ T T+N+ V D+ND P F S Y ++PE G V V+A+DAD NA
Sbjct: 2338 DSGSPALTGTGTINVIVDDVNDNVPTFASNAYFTTIPEDAPTGTDVLLVNASDADASTNA 2397
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V+ + + F ++ +TG I T+ LD E + Y
Sbjct: 2398 VIRI-IGGNSQFTINPSTGQIITSALLDRETKDNY 2431
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF---NLDPAT 70
D L Y + + +V+A+DKDSG G + Y + + NT DA F L +
Sbjct: 997 DQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTIAEGNTGDAFGIFPDGQLYIKS 1056
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E +QD LS+T V + + D+ND P F S Y F E Q G
Sbjct: 1057 ELDRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAG 1116
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
VG+V A D D G N V YS P F + A +G+I D E
Sbjct: 1117 SFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTHQFDRE 1164
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 76/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3210 GTTVIHLNATDADSGTNAVIAYTVQSSDSD---LFVIDPNT---GVITTQGFLDFETKQS 3263
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S ATVN+++ N+ P F S Y F + E G VG V A+
Sbjct: 3264 YHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFAS 3323
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F ++ TG I + LD EK+ ERV L
Sbjct: 3324 DRDLGTDGEVHYLIFGNSRKKGFQINKKTGQIYVSGILDREKE----ERVSL 3371
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L ATV++ + DIND P+F Y+ ++ E L V RV A+D DEG N +++YS+
Sbjct: 1190 LKDQATVHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSI 1249
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E+ F +D+ +G + LDYE Y
Sbjct: 1250 IKGNEERQFAIDSTSGQVALIGKLDYEATPAY 1281
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 78/162 (48%), Gaps = 22/162 (13%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQG-- 74
++G L++V A D KD G VEY + LDN+T S + + +Q
Sbjct: 2997 KVGTKLIRVTAIDDKDFGLNSEVEYFISNDNHLGKFKLDNDTGWISVASSLISDLNQNFF 3056
Query: 75 ---PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D+G LSS ATV+I VT+ N PEF ++PE G V V A D
Sbjct: 3057 ITVTAKDKGNPPLSSQATVHITVTEENYHTPEFSQSHMSATIPESHSVGSIVRTVSARDR 3116
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQ 167
D N ++ YS+ E+ F ++++TG + KALDYE Q
Sbjct: 3117 DAAMNGLIKYSISSGNEEGIFAINSSTGILTLAKALDYELCQ 3158
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 71/174 (40%), Gaps = 32/174 (18%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPATEHQGPIQ 77
+ + G ++ Q KA D D G G+V Y L N N + L P H G Q
Sbjct: 904 ENWQAGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINEKNGTISLLGPLDVHAGSYQ 963
Query: 78 DE--------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
E LSS+ + + V D+ND +P F L YE ++ E + +V A+D
Sbjct: 964 IEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDK 1023
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYLERV 173
D G N + Y++ E NTGD + LD E Q Y+ V
Sbjct: 1024 DSGANGEIAYTIAE-------GNTGDAFGIFPDGQLYIKSELDRELQDRYVLMV 1070
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 27/165 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGPI--- 76
G ++QV A D D G G V Y +++ NT+ F +D P + P
Sbjct: 2170 GTDIIQVFAADGDEGTNGQVRYGIVNGNTNQE--FRIDSVTGAITVAKPLDREKTPTYHL 2227
Query: 77 ----QDEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDA 128
D G + T+ V+I + DIND P F+ PY SVPE L + +V A D
Sbjct: 2228 TVQATDRGSTPRTDTSMVSIVLLDINDFVPVFEPSPYSVSVPENLGTLPRTILQVVARDD 2287
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D+G N+ + Y + ED F + A +G++ ++LD E ++ ++
Sbjct: 2288 DQGSNSKLSYVLFGGNEDNAFTLSA-SGELGVTQSLDRETKERFV 2331
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1724 AEVEITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTYTIISGA 1783
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ + LD E++ Y
Sbjct: 1784 DDSFRIDPESGDLIATRRLDRERRSKY 1810
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 71/159 (44%), Gaps = 20/159 (12%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY-------FNLDPATEHQGP------- 75
G + + ATD DSG G + Y + +++ D + FNL +++
Sbjct: 1857 GSLVAAILATDDDSGVNGEITYIVNEDDEDGIFFLNPITGVFNLTRLLDYEVQQYYILTV 1916
Query: 76 -IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
+D GG +T V + D+ND P F Y S+ E G V + TDAD+G N
Sbjct: 1917 RAEDGGGQFTTIRVYFNILDVNDNPPVFSLNSYSTSLMENLPVGSTVLVFNVTDADDGIN 1976
Query: 134 AVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ + YS+ F VD N G ++ KALD E Q Y
Sbjct: 1977 SQLTYSIASGDSLGQFTVDKN-GVLKVLKALDRESQSFY 2014
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LSS+ +V + VTD+ND P FQ PY +P G V V TDAD G N+ ++YS+
Sbjct: 2446 LSSSTSVLVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSFVFAVTVTDADIGPNSELHYSL 2505
Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 70/164 (42%), Gaps = 35/164 (21%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--DEGGLS---------- 83
+ ATD DSG + Y ++ N +F++ +EH G + GGL
Sbjct: 497 ISATDGDSGLNANLRYSIVSGN--GLGWFHI---SEHSGLVTTGSSGGLDRELASQIVLN 551
Query: 84 ------------STATVNIRVTDINDKNPEF-QSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
S A + + + D+ND+ P F Q Y+ SV E G + + ATD D
Sbjct: 552 ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTGTELLMLRATDGD 611
Query: 130 EGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V +S+ E F +D +G + T +LD E+Q Y
Sbjct: 612 LGDNGTVRFSLQEAETDRRSFRLDPVSGRLSTISSLDREEQAFY 655
Score = 42.4 bits (98), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
G ++ VNI V D+ND +P F Q++ V Q G ++ + A D DEG N +V Y
Sbjct: 871 GTVTGDTMVNITVKDLNDNSPHFLQAIESVNVVENWQAGHSIFQAKAVDPDEGVNGMVLY 930
Query: 139 SV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
S+ P+++ F ++ G I LD +E
Sbjct: 931 SLKQNPKNL-FAINEKNGTISLLGPLDVHAGSYQIE 965
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
SS ++I V D+ND P F+ P+ + E + V A D D G N + Y +
Sbjct: 2649 FSSYEKLDITVLDVNDNAPIFKEDPFISEILENLSPRKILTVSAMDKDSGPNGQLDYEIV 2708
Query: 142 E---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ F ++ TG+IR+ + LD EK Y+
Sbjct: 2709 NGNMENSFSINHATGEIRSVRPLDREKVSHYV 2740
Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 68/174 (39%), Gaps = 20/174 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G V+Y + + ++ LD
Sbjct: 694 YFAHIKENEPGGSYITTVSATDPDLGTNGTVKYSISAGDRSRFQVNAQSGVISTRMALDR 753
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V I V D D P F + Y F V E G VG
Sbjct: 754 EEKTAYQLQVVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFENVALGYHVG 813
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A+ D N + Y D F ++ TG + T +D E+Q Y +V
Sbjct: 814 SVSASTMDLNSN-ISYLITTGDQKGMFAINQVTGQLTTANVIDREEQSFYQLKV 866
Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N + Y + +
Sbjct: 1515 VTILVTDLNDNVPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEIEYEIINGDTDT 1574
Query: 146 FVVDANTGDIRTNKAL 161
F+VD +GD+R AL
Sbjct: 1575 FIVDRYSGDLRVASAL 1590
Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 55/123 (44%), Gaps = 5/123 (4%)
Query: 59 DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
++ S++NL H P +STA V+I + D+ND P F S P +PE
Sbjct: 2009 ESQSFYNL-VVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLS-PKLTYIPENTPID 2066
Query: 118 LAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
V + ATD D G N+ + Y++ P F + G++R LD E+ Y V
Sbjct: 2067 TVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2126
Query: 176 ISK 178
K
Sbjct: 2127 TDK 2129
Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG + Y + N F++ P T E Q
Sbjct: 1329 RIGELVSSVTATDSDSGDNADLYYSITGTNNHGT--FSISPNTGSIFLAKKLDFETQSLY 1386
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G SST +V I V D ND P F S+ E G +V V A D
Sbjct: 1387 KLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVTAHD 1446
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + Y++ + +P F +D G I TN +D E L+
Sbjct: 1447 PDADINGQLSYTIIQQMPRGNHFTIDEVKGTIYTNAEIDREFANLF 1492
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNAVVYYSV 140
SS A++ I V DIND P F Y ++ E G V + ATD D G NA + YS+
Sbjct: 456 SSVASLVIFVNDINDHPPVFSQQVYRVNLSEEAPPGSYVSGISATDGDSGLNANLRYSI 514
>gi|395504784|ref|XP_003756727.1| PREDICTED: protocadherin gamma-A11-like [Sarcophilus harrisii]
Length = 840
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 73/163 (44%), Gaps = 25/163 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------------- 70
G L+ V ATD D G G V Y + + A+ F LD T
Sbjct: 257 GSLLLWVNATDSDEGVNGEVTYSFRNIDDKASEIFQLDSQTGQLLLVESLDYEESKIYEM 316
Query: 71 EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
E QG QD GGL ++A V IRV D+ND PE + SVPE G V + D D
Sbjct: 317 EIQG--QDGGGLMTSAKVLIRVLDVNDNAPEVMVTSFTSSVPENSPPGTVVALLKVHDQD 374
Query: 130 EGQNAVVYYSVPEDIPFVVD---ANTGDIRTNKALDYEKQQLY 169
G N V S+ +PF ++ AN + ++ALD E+ +Y
Sbjct: 375 SGDNGHVTCSISGQLPFKLEKSYANYYTLVIDRALDREQISMY 417
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
GLS TA + + V D ND P F Y SVPE G + V+ATD+DEG N V YS
Sbjct: 220 GLSGTARIRVLVLDANDNAPVFTQSVYSVSVPENLPKGSLLLWVNATDSDEGVNGEVTYS 279
Query: 140 V------PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+I F +D+ TG + ++LDYE+ ++Y
Sbjct: 280 FRNIDDKASEI-FQLDSQTGQLLLVESLDYEESKIY 314
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 79/186 (42%), Gaps = 36/186 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPAT----- 70
Y A + + G ++ V A+D D+ + + Y + D + +SY +++ T
Sbjct: 456 YSAYIHENNARGSSIYSVTASDPDTKENAQLTYSISDYMLHGASLSSYISINSETGVLYA 515
Query: 71 ------------EHQGPIQDEGG--LSSTATVNIRVTDINDKNPE--FQSLP------YE 108
+ Q ++D G LSS ++ + + D ND PE + + P E
Sbjct: 516 LRSFDYEQFRDLQLQITVKDGGDPPLSSNVSLTLFILDQNDNAPEILYSTFPTDGSTGVE 575
Query: 109 FSVPEGQDGLAVGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKAL---D 162
+ + G V +V A D D GQNA + Y V E F V +TG+IRT + D
Sbjct: 576 LAPRSAESGYLVTKVVAVDGDSGQNAWLSYRLLKVTEPGLFSVGLHTGEIRTTRTFLDKD 635
Query: 163 YEKQQL 168
KQ L
Sbjct: 636 ALKQSL 641
Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 17/130 (13%)
Query: 46 FGLVEYRLLDNNTDAASYFNLDPATEHQG-PIQDEGGLSSTATVNIRVTDINDKNPEFQS 104
+ LV R LD + S +N+ QG P+ LS+ + ++V DIND +P F
Sbjct: 401 YTLVIDRALDR--EQISMYNVTVTVTDQGTPL-----LSTDTYIPLQVEDINDNSPSFGQ 453
Query: 105 LPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDIP--------FVVDANTGDI 155
Y + E G ++ V A+D D +NA + YS+ + + +++ TG +
Sbjct: 454 TSYSAYIHENNARGSSIYSVTASDPDTKENAQLTYSISDYMLHGASLSSYISINSETGVL 513
Query: 156 RTNKALDYEK 165
++ DYE+
Sbjct: 514 YALRSFDYEQ 523
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDIPF 146
+ + V DIND P F++ E + E GL G A D D G N++ Y + ++ F
Sbjct: 118 LEVEVIDINDNAPRFRTDEVEIKINENAAPGLRFGLPSAKDPDVGVNSLQNYQLSQNNHF 177
Query: 147 VVDANTG-------DIRTNKALDYEKQQLY 169
++ +G ++ KALD E++ ++
Sbjct: 178 SLNVLSGIDGIKYPELVLEKALDREEESVH 207
>gi|195333203|ref|XP_002033281.1| GM21230 [Drosophila sechellia]
gi|194125251|gb|EDW47294.1| GM21230 [Drosophila sechellia]
Length = 3575
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------- 68
S Y A + +G +++QV A+D D G G ++Y L D + + S F +DP
Sbjct: 1009 SPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGS-FVIDPTSGTIRT 1067
Query: 69 ---------ATEHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
A H I + G LSST V IR+ D+ND P F S VPE
Sbjct: 1068 NKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSP 1127
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV 140
G VG +HA D DEG NAVV+YS+
Sbjct: 1128 VGSVVGEIHAHDPDEGVNAVVHYSI 1152
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 83/178 (46%), Gaps = 27/178 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPATEH--- 72
Y A + +G T++ V ATD D G + Y L + N + F+++P T
Sbjct: 902 YSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVT 961
Query: 73 QGPIQDE-------------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
P+ E GG LS T V I VTD+ND P F+S Y+ S+ E
Sbjct: 962 NAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDAL 1021
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G +V +V A+D D G N + Y + ED FV+D +G IRTNK LD E ++
Sbjct: 1022 VGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVF 1079
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 83/191 (43%), Gaps = 44/191 (23%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--------FNLDPAT 70
+ A R+ +G T++ ++ATD+D GK +EY + + TD A F +D
Sbjct: 469 FEASIREGATVGSTVITLRATDQDIGKNAEIEYGI-EAVTDGAGLAQDQEMPIFRID--- 524
Query: 71 EHQGPIQDEGGL-------------------------SSTATVNIRVTDINDKNPEFQSL 105
G I L ++TA+V ++V D ND P+F
Sbjct: 525 SRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSER 584
Query: 106 PYEFSVPEGQDG----LAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTN 158
Y VPE Q G V + ATDAD+G NA + Y++ F +D+ +GD+
Sbjct: 585 TYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLV 644
Query: 159 KALDYEKQQLY 169
K LDYE + Y
Sbjct: 645 KPLDYESVRSY 655
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 55/102 (53%), Gaps = 9/102 (8%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG S TATV+I +TD N+ P F++ PY SV E G V V ATD+D G NA +
Sbjct: 873 DSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQI 932
Query: 137 YYSVPEDI--------PFVVDANTGDIRTNKALDYEKQQLYL 170
YS+ E+ PF ++ TG I TN LD E YL
Sbjct: 933 TYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYL 974
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 25/158 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------- 76
T+ ++ATD D G + Y ++ NT S F++D + +
Sbjct: 602 TVAHIRATDADQGNNAAIRYAIIGGNTQ--SQFSIDSMSGDVSLVKPLDYESVRSYRLVI 659
Query: 77 --QDEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
QD G S + T + V D ND P F + ++ SV E G + RV A D+DEG
Sbjct: 660 RAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEG 719
Query: 132 QNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQ 166
NA + YS+ E + P VD TG ++T K LD E+Q
Sbjct: 720 ANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQ 757
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
S T T+ + V D ND +P F++ +E S+ EG G V + ATD D G+NA + Y +
Sbjct: 445 SGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIE 504
Query: 142 -----------EDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+++P F +D+ +G I T +LD E Y
Sbjct: 505 AVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSY 544
Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 29/167 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP-- 75
+G +++V+A D D G + Y + + + + +DP T E QG
Sbjct: 704 VGYNIIRVQAYDSDEGANAEITYSISERDDNFP--LAVDPRTGWVQTIKPLDREEQGRFA 761
Query: 76 ---IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDA 128
+ +GG+ S++++V I V D+ND +P F YE +V E Q G V V ATD
Sbjct: 762 FQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDP 821
Query: 129 DEGQNAVVYYSVPEDIP---FVVDANTGD--IRTNKALDYEKQQLYL 170
DE ++ ++Y + F + + G I ++LDY++++ +L
Sbjct: 822 DE--DSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFL 866
>gi|426367248|ref|XP_004050645.1| PREDICTED: protocadherin-16 [Gorilla gorilla gorilla]
Length = 3298
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 82/162 (50%), Gaps = 28/162 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGP- 75
G +++V A D D G G V Y L +F++DP + E Q
Sbjct: 489 GSFVVRVTARDPDQGTNGQVTYSLAPGAH--THWFSIDPTSGIITTAASLDYELEPQPQL 546
Query: 76 --IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ +GGL +S+ATV++ + D+ND P+FQ Y S+PEG Q G +V ATDAD
Sbjct: 547 IVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDAD 606
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEK 165
G ++ YS+ + PF +DA++GD+ T + LD ++
Sbjct: 607 SGPFGLLSYSLGAGLGSSGSPPFRIDAHSGDVCTTRTLDRDQ 648
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 78/177 (44%), Gaps = 27/177 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + R+ G +L+ ++ATD D G G V Y + + + F+LDP T
Sbjct: 1654 YSVLLRENSPPGTSLLTLRATDPDVGANGQVTYGGVSSES-----FSLDPDTGVLTTLRA 1708
Query: 71 ---EHQGPI------QDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQDGLA 119
E Q I QD G V +RV D ND P F S VPEGQD
Sbjct: 1709 LDREEQEEINLTVYAQDRGSPPQLTHVTVRVAVEDENDHAPTFGSAHLSLEVPEGQDPQT 1768
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ + A+D D G N + Y + + P FV+D +G+ T + LD E + + R+
Sbjct: 1769 LTMLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQLRI 1825
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL---------------DPATEHQGPI 76
TL ++A+D D G G ++YR+LD + A +L +PA + +
Sbjct: 1768 TLTMLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQLRIEA 1827
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQN 133
+D G LS+T + + V D ND P F Y VPE G + ++ A D D G N
Sbjct: 1828 RDGGQPALSATLLLTVTVLDANDHAPAFPVPAYSVEVPEDVPAGTLLLQLQAHDPDAGAN 1887
Query: 134 AVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSYL 184
V Y + F+++ ++G++RT ALD E+ Y V + A L
Sbjct: 1888 GHVTYYLGAGTAGAFLLEPSSGELRTAAALDRERCPSYTFSVSAVDGAAAGPL 1940
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 21/147 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNT--DAASYFNLDPAT-----------EHQGPI 76
G + + A D D+G FG + Y LL+ + F L+ +T EH
Sbjct: 2722 GTLVTTLHAIDGDAGAFGRLRYSLLEAGPGPEGREAFALNSSTGELRARVPFDYEHTESF 2781
Query: 77 Q------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ D G LS++ TV++ VT ++ +P F + + F VPEG + G ++G V ATD D
Sbjct: 2782 RLLVGAADAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQVPEGARRGHSLGHVQATDED 2841
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDI 155
G + +V YS+ P F ++ TG +
Sbjct: 2842 GGADGLVLYSLATSSPYFGINQTTGAL 2868
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 64/146 (43%), Gaps = 26/146 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY--------------RLLDNNTDAASY 63
FY A + + G +QV ATD DSG FGL+ Y R+ ++ D +
Sbjct: 582 FYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGSSGSPPFRIDAHSGDVCTT 641
Query: 64 FNLDPATEHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEG 114
LD QGP D GGL S V + ++D ND P+F Y S+ +
Sbjct: 642 RTLD---RDQGPSSFDFTVTAVDGGGLKSMVYVKVFLSDENDNPPQFYPREYAASISAQS 698
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV 140
G AV R+ A D D+G + + Y +
Sbjct: 699 PPGTAVLRLRAHDPDQGSHGRLSYHI 724
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 28/167 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQ 73
+G L+ V+A+D D G GLV + + ++ D + F LD ++ HQ
Sbjct: 2617 VGAELLHVEASDADPGPHGLVRFTV--SSGDPSGLFELDESSGTLRLAHALDCETQARHQ 2674
Query: 74 GPIQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
+Q G + A V I V D+ND P F S+ E Q G V +HA D D
Sbjct: 2675 LVVQAADPAGAHFALAPVTIEVQDVNDHGPAFPLNLLSTSLAENQPPGTLVTTLHAIDGD 2734
Query: 130 EGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYEKQQLY 169
G + YS+ E P F ++++TG++R DYE + +
Sbjct: 2735 AGAFGRLRYSLLEAGPGPEGREAFALNSSTGELRARVPFDYEHTESF 2781
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 73/167 (43%), Gaps = 32/167 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQ----- 73
G ++QV+A D G + Y L A+S F L+P + E Q
Sbjct: 1016 GTQVLQVQAQAPDGGP---ITYHLAAEG--ASSPFGLEPQSGWLWVRAALDREAQELYIL 1070
Query: 74 ------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
G + G + TATV + + + N+ +P P +V E Q G +VGRV AT
Sbjct: 1071 KVMAVSGSKAELGQQTGTATVRVSILNQNEHSPRLSEDPTFLAVAENQPPGTSVGRVFAT 1130
Query: 127 DADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
D D G N + YS+ + F + TG++ T + LD E+Q Y
Sbjct: 1131 DRDSGPNGRLTYSLQQLSEDSKAFRIHPQTGEVTTLQTLDREQQSSY 1177
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 30/158 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPI--- 76
G L+Q++A D D+G G V Y L A F L+P++ + P
Sbjct: 1871 GTLLLQLQAHDPDAGANGHVTYYL---GAGTAGAFLLEPSSGELRTAAALDRERCPSYTF 1927
Query: 77 -------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-----GQDGLAVGRVH 124
G LS+T +V I V D+ND P F + P +P LA+ +
Sbjct: 1928 SVSAVDGAAAGPLSTTVSVTITVRDVNDHAPTFPTSPLRLRLPRPGPSFSTPTLALATLR 1987
Query: 125 ATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKA 160
A D D G NA + Y + P VD+ TG+IR ++
Sbjct: 1988 AEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARS 2025
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 71/160 (44%), Gaps = 27/160 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYFN-LDP----------- 68
G + V A D D G+ V YRL L ++T A S LD
Sbjct: 1561 GPAALHVVARDPDLGEAARVSYRLASGGDGHFRLHSSTGALSVVRPLDRERRAEHVLTVV 1620
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
A++H P + S+T + + V D+ND+ P FQ Y + E G ++ + ATD
Sbjct: 1621 ASDHGSPPR-----SATQVLTVSVADVNDEAPTFQQQEYSVLLRENSPPGTSLLTLRATD 1675
Query: 128 ADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQ 167
D G N V Y F +D +TG + T +ALD E+Q+
Sbjct: 1676 PDVGANGQVTYGGVSSESFSLDPDTGVLTTLRALDREEQE 1715
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A +++ + DIND P F Y V E G V +V A+DAD G N V Y +
Sbjct: 239 ALLDVTLLDINDHAPAFNQSRYHAVVSESLAPGSPVLQVFASDADAGVNGAVTYEINRRQ 298
Query: 143 ---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D PF +DA+TG ++ + LD+E+++++
Sbjct: 299 SEGDGPFSIDAHTGLLQLERPLDFEQRRVH 328
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 76/176 (43%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------P 68
Y A + G +++++A D D G G + Y +L N+ F LD P
Sbjct: 690 YAASISAQSPPGTAVLRLRAHDPDQGSHGRLSYHILAGNS--PPLFTLDEQSGLLTVAWP 747
Query: 69 ATEHQGPI-------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGL 118
+ QD GGL + +A VNI + P F+ L Y FSVPE G
Sbjct: 748 LARRANSVVQLEIGAQDGGGLQAEPSARVNISIVPGTPTPPIFEQLQYVFSVPEDVAPGT 807
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
+VG V A + G+ A V S+ P F +DA +G ++T + LD E LE
Sbjct: 808 SVGIVQAHNP-PGRLAPVTLSLSGGDPRGLFSLDAVSGLLQTLRPLDRELLGPVLE 862
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 72/172 (41%), Gaps = 29/172 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH----------QGPI--- 76
G + ++A D DSG V + LL A F +DP T H GP
Sbjct: 910 GTPIYTLRALDPDSGVNSRVTFTLLAGGGGA---FTVDPTTGHVRLMRPLGPSGGPAHEL 966
Query: 77 ----QDEGGLSSTATVNIRVT--DINDKN--PEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D G T+ +RV D+ + P F S Y +P G + G V +V A
Sbjct: 967 ELEARDGGSPPRTSHFRLRVVVQDVGTRGLAPRFNSPTYRVDLPSGTNAGTQVLQVQAQA 1026
Query: 128 ADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D G + Y+ E PF ++ +G + ALD E Q+LY+ +V +S
Sbjct: 1027 PDGGP--ITYHLAAEGASSPFGLEPQSGWLWVRAALDREAQELYILKVMAVS 1076
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 78/172 (45%), Gaps = 35/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G ++ +V ATD+DSG G + Y L + D+ + F + P T E Q
Sbjct: 1121 GTSVGRVFATDRDSGPNGRLTYSLQQLSEDSKA-FRIHPQTGEVTTLQTLDREQQSSYQL 1179
Query: 76 ---IQDEGG--LSSTATVNIRVTDINDKNPEF--------QSLPYEF--SVPEGQDGLAV 120
+QD G S+T TV++ V D+ND +P F LP + VP G V
Sbjct: 1180 LVQVQDGGSPPRSTTGTVHVAVLDLNDNSPTFLQASGAAGGGLPIQVPDRVPPGT---LV 1236
Query: 121 GRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ A D DEG+N + Y++ P F + ++G++ T L ++ Y+
Sbjct: 1237 TTLQAKDPDEGENGTILYTLTGPGSELFSLHPHSGELLTAAPLIQAERPHYV 1288
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 70/180 (38%), Gaps = 39/180 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + L L+QV+A D D G G + Y L + A F++DP
Sbjct: 2176 YVAFLPESRPLEGPLLQVEADDLDQGSGGQISYSLAASQP-ARGLFHVDPTTGTITTTAI 2234
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
AT+ P L +AT+ + V D ND P P+E V E
Sbjct: 2235 LDREIWAETRLVLMATDRGSP-----ALVGSATLTVMVIDTNDNRPTIPQ-PWELRVSED 2288
Query: 114 GQDGLAVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + +V D D G V++Y S P+D PF V G + LD+E+ Y
Sbjct: 2289 ALLGSEIAQVTGNDVDSGP--VLWYVLSPSGPQD-PFSVGRYGGRVSLTGPLDFEQCDRY 2345
Score = 43.1 bits (100), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------- 68
Y M + G ++ V ATD+DSG G + Y L A F++DP
Sbjct: 2380 LYQVMLLEHTPPGSAILSVSATDRDSGANGHISYHL----ASPADGFSVDPNNGTLFTIV 2435
Query: 69 ---ATEHQGP--------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG- 114
A H G +D G G ++ ATV++++ D ND P F Y +V E
Sbjct: 2436 GTVALGHDGSGAVDVVLEARDHGAPGRAARATVHVQLQDQNDHAPSFTLSHYRVAVTEDL 2495
Query: 115 QDGLAVGRVHATDADEGQ-NAVVYYSV 140
G + + ATDAD + +A V YS+
Sbjct: 2496 PPGSTLLTLEATDADGSRSHAAVDYSI 2522
Score = 42.7 bits (99), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 72/178 (40%), Gaps = 40/178 (22%)
Query: 30 GVTLMQVKATDKDSGK-FGLVEYRLLDNNTDAASYFNLDP----ATEHQGPIQDEGGL-- 82
G TL+ ++ATD D + V+Y ++ N F L+P A E GP G
Sbjct: 2498 GSTLLTLEATDADGSRSHAAVDYSIISGNW--GRVFQLEPRLAEAGESAGPGPRALGCLV 2555
Query: 83 ---------------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
SS V + V D+ND P F Y +VPE
Sbjct: 2556 LLEPLDFESLTQYNLTVAAADRGQPPQSSVVPVTVTVLDVNDNPPVFTRASYRVAVPEDT 2615
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
G + V A+DAD G + +V ++V P F +D ++G +R ALD E Q +
Sbjct: 2616 PVGAELLHVEASDADPGPHGLVRFTVSSGDPSGLFELDESSGTLRLAHALDCETQARH 2673
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 15/93 (16%)
Query: 82 LSSTATVNIRVTDINDKNPEF-------QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
L + A + VTD+ND P F + LP E ++P G V RV A D D+G N
Sbjct: 452 LRAEAAFVLHVTDVNDNAPAFDRQLYRPEPLP-EVALP----GSFVVRVTARDPDQGTNG 506
Query: 135 VVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
V YS+ F +D +G I T +LDYE
Sbjct: 507 QVTYSLAPGAHTHWFSIDPTSGIITTAASLDYE 539
Score = 38.9 bits (89), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD-EGQNAVVYYSVPEDIP 145
V +RV D N+ P F P ++PE + G A+ A+DAD G N+ V Y + P
Sbjct: 1422 VQVRVQDENEHAPAFARDPLALALPENPEPGAALYTFRASDADGPGPNSDVRYRLLRQEP 1481
Query: 146 FV----VDANTGDIRTNKALDYEKQQLYL 170
V +DA TG + + LD E L
Sbjct: 1482 PVPALRLDARTGALSAPRGLDRETTPALL 1510
>gi|5832705|dbj|BAA84069.1| Flamingo [Drosophila melanogaster]
Length = 3575
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------- 68
S Y A + +G +++QV A+D D G G ++Y L D + + S F +DP
Sbjct: 1010 SPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGS-FVIDPTSGTIRT 1068
Query: 69 ---------ATEHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
A H I + G LSST V IR+ D+ND P F S VPE
Sbjct: 1069 NKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSP 1128
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV 140
G VG +HA D DEG NAVV+YS+
Sbjct: 1129 VGSVVGEIHAHDPDEGVNAVVHYSI 1153
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 83/178 (46%), Gaps = 27/178 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPATEH--- 72
Y A + +G T++ V ATD D G + Y L + N + F+++P T
Sbjct: 903 YSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVT 962
Query: 73 QGPIQDE-------------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
P+ E GG LS T V I VTD+ND P F+S Y+ S+ E
Sbjct: 963 NAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILEDAL 1022
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G +V +V A+D D G N + Y + ED FV+D +G IRTNK LD E ++
Sbjct: 1023 VGTSVIQVAASDPDVGLNGRIKYLLSDRDIEDGSFVIDPTSGTIRTNKGLDRESVAVF 1080
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 83/191 (43%), Gaps = 44/191 (23%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--------FNLDPAT 70
+ A R+ +G T++ ++ATD+D GK +EY + + TD A F +D
Sbjct: 470 FEASIREGATVGSTVITLRATDQDIGKNAEIEYGI-EAVTDGAGLAQDQEMPIFRID--- 525
Query: 71 EHQGPIQDEGGL-------------------------SSTATVNIRVTDINDKNPEFQSL 105
G I L ++TA+V ++V D ND P+F
Sbjct: 526 SRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSER 585
Query: 106 PYEFSVPEGQDG----LAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTN 158
Y VPE Q G V + ATDAD+G NA + Y++ F +D+ +GD+
Sbjct: 586 TYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLV 645
Query: 159 KALDYEKQQLY 169
K LDYE + Y
Sbjct: 646 KPLDYESVRSY 656
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 55/102 (53%), Gaps = 9/102 (8%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG S TATV+I +TD N+ P F++ PY SV E G V V ATD+D G NA +
Sbjct: 874 DSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQI 933
Query: 137 YYSVPEDI--------PFVVDANTGDIRTNKALDYEKQQLYL 170
YS+ E+ PF ++ TG I TN LD E YL
Sbjct: 934 TYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYL 975
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 25/158 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------- 76
T+ ++ATD D G + Y ++ NT S F++D + +
Sbjct: 603 TVAHIRATDADQGNNAAIRYAIIGGNTQ--SQFSIDSMSGDVSLVKPLDYESVRSYRLVI 660
Query: 77 --QDEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
QD G S + T + V D ND P F + ++ SV E G + RV A D+DEG
Sbjct: 661 RAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEG 720
Query: 132 QNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQ 166
NA + YS+ E + P VD TG ++T K LD E+Q
Sbjct: 721 ANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQ 758
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
S T T+ + V D ND +P F++ +E S+ EG G V + ATD D G+NA + Y +
Sbjct: 446 SGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIE 505
Query: 142 -----------EDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+++P F +D+ +G I T +LD E Y
Sbjct: 506 AVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSY 545
Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 29/167 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP-- 75
+G +++V+A D D G + Y + + + + +DP T E QG
Sbjct: 705 VGYNIIRVQAYDSDEGANAEITYSISERDDNFP--LAVDPRTGWVQTIKPLDREEQGRFA 762
Query: 76 ---IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDA 128
+ +GG+ S++++V I V D+ND +P F YE +V E Q G V V ATD
Sbjct: 763 FQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDP 822
Query: 129 DEGQNAVVYYSVPEDIP---FVVDANTGD--IRTNKALDYEKQQLYL 170
DE ++ ++Y + F + + G I ++LDY++++ +L
Sbjct: 823 DE--DSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFL 867
>gi|260785516|ref|XP_002587807.1| hypothetical protein BRAFLDRAFT_92256 [Branchiostoma floridae]
gi|229272960|gb|EEN43818.1| hypothetical protein BRAFLDRAFT_92256 [Branchiostoma floridae]
Length = 4039
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 27/188 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------- 71
Y + + + V ATD+DSG G + Y ++ D F +DP T
Sbjct: 3059 YQVTIEESRPMNSHVFTVVATDRDSGVNGEIRYSIVGG--DDYRQFYIDPRTGSVTVAAV 3116
Query: 72 ---------HQGPIQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGL 118
H + GL + + + +TD+ND +P F Y+ S+PE G
Sbjct: 3117 LDYETTPTYHLNISARDRGLLYRENFVILTVDLTDVNDNDPMFDPATYDPSIPENSPSGT 3176
Query: 119 AVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
+V V ATDAD G NA + Y + +D+ F++DA TG+I + LDYE++Q+Y +V
Sbjct: 3177 SVVMVTATDADTGANAAIRYQITGGDGQDL-FIIDAVTGEITSQGGLDYERKQMYTLQVT 3235
Query: 175 LISKFATS 182
+ A+S
Sbjct: 3236 ATNVEASS 3243
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 88/182 (48%), Gaps = 27/182 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A R+ G +++QV A+D D+G G V Y++ N D F + P +
Sbjct: 704 YYASIRENQPSGTSVVQVSASDLDAGLNGRVTYQITRGNPDGK--FTISPQSGQITTTAE 761
Query: 71 ---------EHQGPIQDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
+ + +D G SS AT+++ V DI D PEF Y F + E + G
Sbjct: 762 LDREVRASYQLEVTARDGTGQSSASPATIDVTVVDIQDNPPEFSQPGYNFVIFENVEIGK 821
Query: 119 AVGRVHATDADEGQNAV--VYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
+VG V AT D NA ++ P I F +++ TG I T K +D E+QQLY ++F++
Sbjct: 822 SVGMVSATFRDANANATYSIFSGDPAGI-FRINSQTGLISTAKEVDREQQQLY--QLFVV 878
Query: 177 SK 178
+
Sbjct: 879 AS 880
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 72/165 (43%), Gaps = 37/165 (22%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAA-------------------------SYFNLDPAT 70
V A D+D+G + Y + +D A S F L+ A
Sbjct: 1133 VTAVDRDAGTNAELRYSFITEQSDFAINPSTGAISSLRMFDREELIQRTGLSTFTLEVAV 1192
Query: 71 EHQG--PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
G P+QD AT+ I V DIND P F Y+ S+ E Q V RV A+D
Sbjct: 1193 TDGGDPPLQDR------ATLQITVRDINDNVPRFAQDTYQVSISENAQRSQQVVRVSASD 1246
Query: 128 ADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D G NA+V Y++ E + F++D+++G I + LD E + Y
Sbjct: 1247 MDYGNNALVRYTITEGNDEGKFLIDSSSGQIMLAQLLDREVEDFY 1291
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 21/167 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------AASYFNLDPATEHQGPI----- 76
+G L+QV A D D G G+V Y ++ NTD ++ +H+
Sbjct: 2119 VGTELVQVVAADVDEGTNGVVRYSIVSGNTDNDLAINAVTGRISVARLIDHERTTGYNLV 2178
Query: 77 ---QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA--VGRVHATDAD 129
+D+G L + ATV I VTD+ND P F + P+ V E + + V ++ A D D
Sbjct: 2179 VRARDQGTSPLEALATVTITVTDVNDYVPLFLNSPFVAHVMENDNNVPQFVTQISAQDED 2238
Query: 130 EGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVF 174
G V Y +P+D F + ++ G I + LD E Q +L V
Sbjct: 2239 SGTMGQVDYYLPDDKDGKFSITSSDGRISLLRTLDREDQSEFLLTVL 2285
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 77/177 (43%), Gaps = 25/177 (14%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---- 70
+S F + + + + + Q+ A D+DSG G V+Y L D+ S + D
Sbjct: 2211 NSPFVAHVMENDNNVPQFVTQISAQDEDSGTMGQVDYYLPDDKDGKFSITSSDGRISLLR 2270
Query: 71 ----EHQGPI------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFS----VPEG 114
E Q +D G L+ T TV + V D+ND P F Y + VP
Sbjct: 2271 TLDREDQSEFLLTVLAEDRGSPRLTGTGTVRVLVDDVNDNTPTFDQQSYTTTIAEDVPVN 2330
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
D L V ATD D G+N + Y++ D+ F V+ TG I T LD E Q L+
Sbjct: 2331 TDVLL---VSATDLDAGENGNIRYTLTGDLGDKFEVNPATGQIITIGLLDRETQSLF 2384
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 68/161 (42%), Gaps = 31/161 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLS------ 83
G +++ V ATD D+G + Y++ D F +D T G I +GGL
Sbjct: 3175 GTSVVMVTATDADTGANAAIRYQITGG--DGQDLFIIDAVT---GEITSQGGLDYERKQM 3229
Query: 84 ----------------STATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHAT 126
T TVNI +T N+ P F Y F + E + G VG V+AT
Sbjct: 3230 YTLQVTATNVEASSRFGTCTVNIHLTGQNEYAPVFLQRLYTFEISESAETGTTVGTVYAT 3289
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
D D+G + +V Y + D F + +G I + LD E
Sbjct: 3290 DRDDGPDGIVNYILVGSSNDKGFAIGLESGAITVAQRLDRE 3330
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 71/169 (42%), Gaps = 24/169 (14%)
Query: 25 DKHELGVTLMQVKATD-KDSGKFGLVEYRLLDNNTDAASYFNLDPATEH----------- 72
+ ++G ++QV A D +D G VEY + N + F++D T
Sbjct: 2957 ENAQIGEMIIQVLAVDNQDIGSNAEVEYSITGGNGTNPNLFSIDRTTGWVSVSASLSGRQ 3016
Query: 73 --------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRV 123
Q Q LS+T V+I VTD+N P F + Y+ ++ E + V V
Sbjct: 3017 NIWYSVTVQARDQGSPALSTTTDVSILVTDVNVYAPAFSAPSYQVTIEESRPMNSHVFTV 3076
Query: 124 HATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
ATD D G N + YS+ + F +D TG + LDYE Y
Sbjct: 3077 VATDRDSGVNGEIRYSIVGGDDYRQFYIDPRTGSVTVAAVLDYETTPTY 3125
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 20/166 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL-LDN----------------NTDA 60
Y + +G ++QV TD D G + +Y+ LD+ N
Sbjct: 2734 LYSTSILEDTPIGSFVIQVSTTDPDIGSNAMAQYKFSLDSQYAEARGKFNMGRDSGNVTV 2793
Query: 61 ASYFNLDPATEHQG-PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGL 118
AS + + + ++ I ++ + ++I + D+ND P F + +E ++PEG +
Sbjct: 2794 ASTLDREISDHYELLVIAEDSAWEANTPLSITILDVNDNPPRFSAPVFERNLPEGIRANQ 2853
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDY 163
V R+ ATD DEG NA V+Y + F +D ++G I T +L++
Sbjct: 2854 LVTRLVATDEDEGTNAEVFYRMKTLSNFFRLDESSGAILTKNSLEF 2899
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPE 142
S VN+ V D+ND NP F + Y S+ E Q G +V +V A+D D G N V Y +
Sbjct: 681 SAVRVNVIVGDLNDNNPVFYPVRYYASIRENQPSGTSVVQVSASDLDAGLNGRVTYQITR 740
Query: 143 DIP---FVVDANTGDIRTNKALDYEKQQLY 169
P F + +G I T LD E + Y
Sbjct: 741 GNPDGKFTISPQSGQITTTAELDREVRASY 770
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 71/180 (39%), Gaps = 33/180 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR----------LLDNNT---------- 58
Y ++ +G + V ATD DSG V Y ++D NT
Sbjct: 490 YNTTLSERVPIGSYVQGVTATDDDSGLNAQVRYAIVSGNEYGWFMIDGNTGLVTTQADLD 549
Query: 59 -DAASYFNLDPATEHQG-PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ AS L+ + QG IQ +S + I + D ND P F PY +V E Q
Sbjct: 550 HEVASGVVLNISASDQGISIQ----FTSYTQLTITIIDENDFVPTFSESPYNVTVLENQS 605
Query: 117 G-LAVGRVHATDADEGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEKQQLY 169
V V A D D+G N VYY + F +D+NTG I T D E LY
Sbjct: 606 APREVITVTAQDDDQGSNGEVYYEFDTETANRYSGSFRLDSNTGRIDTLVTFDRETTDLY 665
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDADEGQNAVV 136
D LSS + I + D+ND P F PY SV E + L +V V A+DAD G N
Sbjct: 2601 DTPALSSYHRLTIALADVNDNPPIFSQDPYVGSVGENEGTLTSVLTVSASDADSGSNGEF 2660
Query: 137 YYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
Y + D F V+ NTG + T + LD E++ Y
Sbjct: 2661 EYRLRAAGNLDNSFQVNPNTGQVSTRRFLDREQRDSY 2697
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 72/170 (42%), Gaps = 38/170 (22%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTAT- 87
+ +M ++A D D + VEY + + + F LD T G ++ G L AT
Sbjct: 2015 VNTVVMTIRAEDPDEERNSYVEYSMA---SIPGNKFALDSVT---GQLRVNGDLDREATP 2068
Query: 88 ---------------------VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVG----R 122
+ I + D ND NP F + Y+ SV E +AVG +
Sbjct: 2069 SYIVTVTATDKGRPPMSASMDLTINLLDRNDNNPVFGPVSYDVSVLE---DVAVGTELVQ 2125
Query: 123 VHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
V A D DEG N VV YS+ D ++A TG I + +D+E+ Y
Sbjct: 2126 VVAADVDEGTNGVVRYSIVSGNTDNDLAINAVTGRISVARLIDHERTTGY 2175
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
LSSTA V I V DIND P F + P SV E V + A D DE +N+ V YS+
Sbjct: 1981 LSSTAQVEIIVNDINDNPPRFVT-PNVTSVYENSPVNTVVMTIRAEDPDEERNSYVEYSM 2039
Query: 141 PEDIP---FVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
IP F +D+ TG +R N LD E Y+ V K
Sbjct: 2040 AS-IPGNKFALDSVTGQLRVNGDLDREATPSYIVTVTATDK 2079
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 74/180 (41%), Gaps = 34/180 (18%)
Query: 22 MARDKHELGVT--------LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQ 73
A+D +++ ++ +++V A+D D G LV Y + + N + F +D ++
Sbjct: 1220 FAQDTYQVSISENAQRSQQVVRVSASDMDYGNNALVRYTITEGNDEGK--FLIDSSSGQI 1277
Query: 74 GPIQ--------------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
Q E LSS VNI V D ND P F V E
Sbjct: 1278 MLAQLLDREVEDFYSLLVDVRDSASENPLSSQCRVNISVLDENDNEPVFSPTLQTADVLE 1337
Query: 114 G-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ + + ATD D G N + YS+ E F +D+ TG + KALDYE +Y
Sbjct: 1338 STRVNDLITTLTATDGDAGSNGEITYSISEGNAHGTFTLDSYTGKLYLAKALDYESTNVY 1397
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
VNI V D ND P F Y S+ E G +V V ATD DEG NA + Y + P
Sbjct: 254 VNISVRDSNDNPPIFDQSEYIVSLNESAPIGTSVLTVRATDIDEGTNAEITYLLDSGEPA 313
Query: 146 --FVVDANTGDIRTNKALDYEKQQLYLERV 173
F +D TG + T + LDYE+ Y V
Sbjct: 314 TKFQIDPRTGVVTTLQELDYEESDNYYVNV 343
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 70/169 (41%), Gaps = 20/169 (11%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD---------------AASYFN 65
A A + LG + + A D D G V Y L+ N ++ A SY
Sbjct: 911 ADAVENWPLGREVYEAAAQDPDDGVNAQVTYELITNPSNKFQVNGDSGIVSLAGALSYEV 970
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVH 124
E Q + S+T T+ + V D+ND P F S Y ++PE Q V
Sbjct: 971 GQYVLELQATDRGLPPQSATLTLTVTVRDVNDHAPVFSSSSYSTAIPESQPVNDQFFSVT 1030
Query: 125 ATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYL 170
ATD D G N ++ YS+ P F V + G++ ALD E Q Y+
Sbjct: 1031 ATDEDAGLNGLISYSITGGNPGDRFGVFPD-GNLYVRNALDREVQSRYV 1078
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
AT+H P + + A + I V DIND P F+ Y ++ E G V V ATD
Sbjct: 457 ATDHGNPPR-----RTIANLIIYVNDINDHEPVFERTRYNTTLSERVPIGSYVQGVTATD 511
Query: 128 ADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
D G NA V Y++ E F++D NTG + T LD+E
Sbjct: 512 DDSGLNAQVRYAIVSGNEYGWFMIDGNTGLVTTQADLDHE 551
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIPF 146
V I + D ND P F + + S+PE G V V A DAD G NAVV YS
Sbjct: 1739 VTITLEDENDNAPMFNTDYRDISIPEDLASGGLVTTVVANDADVGSNAVVLYS------- 1791
Query: 147 VVDANTGDIRTNKALDYEKQQLYL 170
++ + G I + LDYE+ Q Y+
Sbjct: 1792 IIAGDDGVIILRRPLDYEQTQHYV 1815
Score = 42.4 bits (98), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 64/151 (42%), Gaps = 18/151 (11%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNN--------TDAASYFN--LDPATEHQGPI----QD 78
V ATD+D+G GL+ Y + N D Y LD + + + QD
Sbjct: 1026 FFSVTATDEDAGLNGLISYSITGGNPGDRFGVFPDGNLYVRNALDREVQSRYVLIVEAQD 1085
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAV 135
G S+ A V + + D ND P F + Y F E V V A D D G NA
Sbjct: 1086 NGVEAKSAVANVTVEILDENDNRPLFANSTYNLFLDEEAPAQTMVALVTAVDRDAGTNAE 1145
Query: 136 VYYS-VPEDIPFVVDANTGDIRTNKALDYEK 165
+ YS + E F ++ +TG I + + D E+
Sbjct: 1146 LRYSFITEQSDFAINPSTGAISSLRMFDREE 1176
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 79/184 (42%), Gaps = 40/184 (21%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL-----LDNNTDAASYFNLDPATEH 72
+ G++ ++ L +++ V A+D DSG G EYRL LDN+ F ++P T
Sbjct: 2630 YVGSVGENEGTL-TSVLTVSASDADSGSNGEFEYRLRAAGNLDNS------FQVNPNTGQ 2682
Query: 73 QGPIQ-----------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
+ D+G L+ TATV I V D ND +F++L Y S+ E
Sbjct: 2683 VSTRRFLDREQRDSYSLVVEAVDKGSPTLTGTATVLITVEDKNDNPMQFRNL-YSTSILE 2741
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYSVPEDI-------PFVVDANTGDIRTNKALDYEK 165
G V +V TD D G NA+ Y D F + ++G++ LD E
Sbjct: 2742 DTPIGSFVIQVSTTDPDIGSNAMAQYKFSLDSQYAEARGKFNMGRDSGNVTVASTLDREI 2801
Query: 166 QQLY 169
Y
Sbjct: 2802 SDHY 2805
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 69/165 (41%), Gaps = 32/165 (19%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL---------- 82
++ V ATD D+G+ G + Y L D F ++PAT G I G L
Sbjct: 2333 VLLVSATDLDAGENGNIRYTLTG---DLGDKFEVNPAT---GQIITIGLLDRETQSLFTM 2386
Query: 83 -------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDA 128
SS+ATV + V+D++D P F + +P+ G V ATD
Sbjct: 2387 VVTATDSSAADARSSSATVTVTVSDVDDNVPAFVDRSIDAYLPDNAPTGTFVALASATDP 2446
Query: 129 DEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
DEG N V YS+ + F +D TG I T L Q L+
Sbjct: 2447 DEGTNGDVRYSLSGSDANRFTIDRVTGVISTAMTLSDSSSQYNLQ 2491
Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 63/162 (38%), Gaps = 38/162 (23%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------------------------ 68
+ + ATD D+G G + Y + + N A F LD
Sbjct: 1345 ITTLTATDGDAGSNGEITYSISEGN--AHGTFTLDSYTGKLYLAKALDYESTNVYRLNIT 1402
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHAT 126
A++H P LS+ I V D ND P F + EG GL + V AT
Sbjct: 1403 ASDHGTP-----PLSTVIPFAINVLDSNDNPPTFPPGDTVRQITEGV-GLNTVIATVTAT 1456
Query: 127 DADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYE 164
D D G N + YS+ +P F V+ ++G + T +D E
Sbjct: 1457 DPDSGSNGEIQYSIASQVPQGDQFAVNPSSGQVFTRAEIDRE 1498
Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 52/134 (38%), Gaps = 25/134 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDN----------------------NTDAASYFNL 66
L + V ATD DSG G ++Y + + + AS F++
Sbjct: 1446 LNTVIATVTATDPDSGSNGEIQYSIASQVPQGDQFAVNPSSGQVFTRAEIDREFASTFDI 1505
Query: 67 D-PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHA 125
AT+ P+ + TV IR D+ND NP F S P G V V A
Sbjct: 1506 TVRATDQAIPVSERRHAFKVITVIIR--DVNDNNPLFVSQDAAAIAPSASRGDVVLNVVA 1563
Query: 126 TDADEGQNAVVYYS 139
D DEG N V Y+
Sbjct: 1564 EDPDEGTNGEVRYA 1577
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 69/170 (40%), Gaps = 37/170 (21%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------------- 70
+ ++ ATD+D G V YR+ +++F LD ++
Sbjct: 2855 VTRLVATDEDEGTNAEVFYRM----KTLSNFFRLDESSGAILTKNSLEFVPDWTGTTNPN 2910
Query: 71 EHQGPI--QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHA 125
HQ + D G LS TV I + D ND P FQ + Y VPE Q G + +V A
Sbjct: 2911 HHQFVVIATDRGTPPLSGEVTVIINIIDANDHAPVFQEVSYFSPVPENAQIGEMIIQVLA 2970
Query: 126 TD-ADEGQNAVVYYSV-----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D D G NA V YS+ F +D TG + + +L + Y
Sbjct: 2971 VDNQDIGSNAEVEYSITGGNGTNPNLFSIDRTTGWVSVSASLSGRQNIWY 3020
Score = 35.4 bits (80), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 70/178 (39%), Gaps = 34/178 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------------------AASYFNLDPAT 70
G ++ V A D D G G V Y NT+ + +++ L +
Sbjct: 1555 GDVVLNVVAEDPDEGTNGEVRYAETSGNTNQFDIGGTTGVVTLAQNLSPSQTFYTLVVSA 1614
Query: 71 EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
QGP G SST+ + +T N+ P F Y V E Q G +V V A+ +D
Sbjct: 1615 TDQGP----GRRSSTSEITFFITSPNNNGPAFSRSSYSGIVRENQPVGTSVTSVRASYSD 1670
Query: 130 EGQNAVVYYSVPEDIP--------FVVDANTGDIRTNKALDYEKQ-QLYLERVFLISK 178
G +A + Y + F + TG I T LD E+ ++ V+++ K
Sbjct: 1671 -GHSATIEYYITSIRAGDASVGRYFTIGRTTGRITTGVELDREEGYDSFVLEVYVVDK 1727
>gi|158284502|ref|XP_307205.4| AGAP011526-PA [Anopheles gambiae str. PEST]
gi|157020993|gb|EAA03222.4| AGAP011526-PA [Anopheles gambiae str. PEST]
Length = 1376
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 90/194 (46%), Gaps = 42/194 (21%)
Query: 11 EMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-- 68
E+ DS Y ++ G +++VKATDKD G++G + Y ++ + D YF++D
Sbjct: 8 EIEQDS--YNITVSERAPFGTAILKVKATDKDFGEYGRLAYSIISD--DMQEYFSIDKEK 63
Query: 69 -------------ATEHQGPIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
++ P+ D GG + +TV +RV D ND P FQ Y+ +
Sbjct: 64 GEIVTKKKLDREERMQYDIPVMAVDAGGRAGFSTVRLRVGDENDNQPVFQYREYKTLI-- 121
Query: 114 GQDGLAVG----RVHATDADEGQNAVVYYSV-------------PEDIPFVVDANTGDIR 156
Q L V RV A DAD+ QNAVV YS+ E+ F ++ + G +R
Sbjct: 122 -QGNLTVNTTFYRVRAVDADDNQNAVVKYSIFDSQNSGIRELFGLEEPQFTIN-DAGQLR 179
Query: 157 TNKALDYEKQQLYL 170
K LD E + +L
Sbjct: 180 LAKTLDREVRDAHL 193
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 82/186 (44%), Gaps = 38/186 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-NTDAASYFNLDPATEHQGPIQ 77
Y + + + T +V+A D D + +V+Y + D+ N+ F L+ E Q I
Sbjct: 117 YKTLIQGNLTVNTTFYRVRAVDADDNQNAVVKYSIFDSQNSGIRELFGLE---EPQFTIN 173
Query: 78 DEGGLSSTATVN----------------------------IRVTDINDKNPEFQSLPYEF 109
D G L T++ + V D ND P F+S PY F
Sbjct: 174 DAGQLRLAKTLDREVRDAHLIAILAETDSSPPLTAVTEIVLHVQDENDNTPIFESNPYSF 233
Query: 110 SVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP-----FVVDANTGDIRTNKALDY 163
++ E + G ++ ++ A DAD G N + Y++ D+ F VDA TG I T ALD
Sbjct: 234 ALAENIEKGSSIMKLTARDADSGSNGDIRYALSPDVGDIVNIFDVDAYTGWITTLVALDK 293
Query: 164 EKQQLY 169
EK++ Y
Sbjct: 294 EKREDY 299
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 25/162 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH----------------- 72
G ++QV A D D + + L N A FNLD T H
Sbjct: 450 GTHVLQVLANDMDEPANSRLRFYLTGN---GAEDFNLDKDTGHLKTARKLDRETQSRYSL 506
Query: 73 QGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDAD 129
+QD G ++ + + +TD+ND PEF PY ++PE + G V ++HATDAD
Sbjct: 507 MAHVQDRDHPGWECSSQIELALTDLNDNAPEFSMNPYSVTLPEDAEVGTLVTKIHATDAD 566
Query: 130 EGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
G N + Y+ + F + +G + K LD E++ LY
Sbjct: 567 IGINRKIKYAFLDSYRDHFRIAPESGIVTLAKPLDREQKALY 608
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 74/166 (44%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQDEG---- 80
E+G + ++ ATD D G ++Y LD+ D +F + P + P+ E
Sbjct: 552 EVGTLVTKIHATDADIGINRKIKYAFLDSYRD---HFRIAPESGIVTLAKPLDREQKALY 608
Query: 81 ------------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
LS+ AT+ + V DIND PEF S Y SVPE G + +V AT
Sbjct: 609 NLSVSATDLGHPALSNAATLVVNVQDINDNPPEFTSKHYFASVPEINAIGSEILKVLATS 668
Query: 128 ADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D G NA + YS+ E F + TG + LDYE+ + Y
Sbjct: 669 KDTGINAEITYSIIGGNEHRKFGIHNRTGVLSLADTLDYERAKDYF 714
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 82/184 (44%), Gaps = 23/184 (12%)
Query: 11 EMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT------------ 58
E TS F A + + +G +++V AT KD+G + Y ++ N
Sbjct: 641 EFTSKHYF--ASVPEINAIGSEILKVLATSKDTGINAEITYSIIGGNEHRKFGIHNRTGV 698
Query: 59 -DAASYFNLDPATEHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
A + + A ++ IQ +GG LS+ ATVNI VTD ND +P+F Y + E
Sbjct: 699 LSLADTLDYERAKDYFLTIQAVDGGTPPLSNLATVNISVTDSNDNHPQFTQNSYSARIRE 758
Query: 114 -GQDGLAVGRVHATDADEGQNAVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLY 169
Q G + +V A D D +N V Y++ F ++ +TG + LD E Y
Sbjct: 759 DAQRGDRILQVRANDLDAEENGRVSYTIERGDRMEQFAIEEDTGYVAVAGTLDRESISNY 818
Query: 170 LERV 173
+ V
Sbjct: 819 VLEV 822
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 76/170 (44%), Gaps = 22/170 (12%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------------- 70
E G ++M++ A D DSG G + Y L + D + F++D T
Sbjct: 240 EKGSSIMKLTARDADSGSNGDIRYALSPDVGDIVNIFDVDAYTGWITTLVALDKEKREDY 299
Query: 71 EHQGPIQDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
+ Q D G T +TV +R+ D ND P F+ Y+ SV E G V ++ TD
Sbjct: 300 KFQVLATDNGQPKHTTRSTVIVRLKDYNDCPPVFREGQYKASVSEDALPGTVVLQIATTD 359
Query: 128 AD-EGQNAVVYYSVPED-IPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D E + AV YY + D + N+G++ KALD E Y +V +
Sbjct: 360 KDVELRTAVEYYIIAGDSLSQFQIKNSGEVFVVKALDRESIAEYELKVIV 409
>gi|156361305|ref|XP_001625458.1| predicted protein [Nematostella vectensis]
gi|156212293|gb|EDO33358.1| predicted protein [Nematostella vectensis]
Length = 479
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 88/178 (49%), Gaps = 22/178 (12%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT------DAASYFNL 66
T D Y + R+ +G T ++V+A D D+G +EY + NT D + +
Sbjct: 279 TFDRFLYKSTVRENSPVGTTAIKVQAIDTDTGSNAKIEYIIASGNTNNSFDIDNHGFVTV 338
Query: 67 DPATEHQGP--------IQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEF-SVPEGQ 115
+ A + + +D G L+S +V + + D ND P F LPY F + E
Sbjct: 339 NKAIDFETRKIYNLTIMARDCGDPVLTSIVSVVLLIEDENDNPPVFD-LPYYFVRMYENV 397
Query: 116 DGLA-VGRVHATDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLY 169
A + RVHA+D+D G N+ + YS P PF ++ANTG I T +D+E++++Y
Sbjct: 398 SIRADIIRVHASDSDSGFNSEIRYSFPVGFVVKPFAINANTGMIYTRHEIDFEEKRVY 455
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 79/171 (46%), Gaps = 20/171 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-----------AASYFNL 66
Y A + G ++QVKA D D + G + Y ++ NN+ + +
Sbjct: 181 LYEAWVLENITAGQFVVQVKAKDADYQQNGRLVYSMVRNNSKFRVNETTGEIYLSESLDF 240
Query: 67 DPATEHQ-GPIQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
+ E+ G I + G+ SS+ +V + V D+ND P F Y+ +V E G
Sbjct: 241 EETKEYVFGIIASDSGVEPKSSSTSVRVIVMDVNDNVPTFDRFLYKSTVRENSPVGTTAI 300
Query: 122 RVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V A D D G NA + Y + + F +D N G + NKA+D+E +++Y
Sbjct: 301 KVQAIDTDTGSNAKIEYIIASGNTNNSFDID-NHGFVTVNKAIDFETRKIY 350
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNA-VVYYSVPED 143
A V IR+ D ND P F YE V E G V +V A DAD QN +VY V +
Sbjct: 161 ANVVIRIRDDNDNQPVFSRDLYEAWVLENITAGQFVVQVKAKDADYQQNGRLVYSMVRNN 220
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLYL 170
F V+ TG+I +++LD+E+ + Y+
Sbjct: 221 SKFRVNETTGEIYLSESLDFEETKEYV 247
Score = 39.3 bits (90), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 21/123 (17%)
Query: 64 FNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD------- 116
FNL +G E ++ A V I V D ND NP F+ YE ++ E
Sbjct: 23 FNLTITAHDKGMPSLET--ATRAIVVIDVVDTNDNNPIFELSLYETTILENTTAGSSVMV 80
Query: 117 ------GLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQ 166
G + R+ +D D +N+ + V P F+ +N+G+I + LDYE+
Sbjct: 81 SEYAPVGQTILRLTVSDNDTAENSQLNLRVVSGDPNSTFFL--SNSGEISIARKLDYERL 138
Query: 167 QLY 169
Q+Y
Sbjct: 139 QMY 141
>gi|16933557|ref|NP_003728.1| protocadherin-16 precursor [Homo sapiens]
gi|20139065|sp|Q96JQ0.1|PCD16_HUMAN RecName: Full=Protocadherin-16; AltName: Full=Cadherin-19; AltName:
Full=Cadherin-25; AltName: Full=Fibroblast cadherin-1;
AltName: Full=Protein dachsous homolog 1; Flags:
Precursor
gi|119589089|gb|EAW68683.1| dachsous 1 (Drosophila) [Homo sapiens]
gi|168275540|dbj|BAG10490.1| protocadherin-16 precursor [synthetic construct]
Length = 3298
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 82/162 (50%), Gaps = 28/162 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGP- 75
G +++V A D D G G V Y L +F++DP + E Q
Sbjct: 489 GSFVVRVTARDPDQGTNGQVTYSLAPGAH--THWFSIDPTSGIITTAASLDYELEPQPQL 546
Query: 76 --IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ +GGL +S+ATV++ + D+ND P+FQ Y S+PEG Q G +V ATDAD
Sbjct: 547 IVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDAD 606
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEK 165
G ++ YS+ + PF +DA++GD+ T + LD ++
Sbjct: 607 SGPFGLLSYSLGAGLGSSGSPPFRIDAHSGDVCTTRTLDRDQ 648
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 27/177 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + R+ + G +L+ ++ATD D G G V Y + + + F+LDP T
Sbjct: 1654 YSVLLRENNPPGTSLLTLRATDPDVGANGQVTYGGVSSES-----FSLDPDTGVLTTLRA 1708
Query: 71 ---EHQGPI------QDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQDGLA 119
E Q I QD G V +RV D ND P F S VPEGQD
Sbjct: 1709 LDREEQEEINLTVYAQDRGSPPQLTHVTVRVAVEDENDHAPTFGSAHLSLEVPEGQDPQT 1768
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ + A+D D G N + Y + + P FV+D +G+ T + LD E + + R+
Sbjct: 1769 LTMLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQLRI 1825
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 74/167 (44%), Gaps = 28/167 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQ 73
+G L+ V+A+D D G GLV + + ++ D + F LD ++ HQ
Sbjct: 2617 VGAELLHVEASDADPGPHGLVRFTV--SSGDPSGLFELDESSGTLRLAHALDCETQARHQ 2674
Query: 74 GPIQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
+Q G + A V I V D+ND P F SV E Q G V +HA D D
Sbjct: 2675 LVVQAADPAGAHFALAPVTIEVQDVNDHGPAFPLNLLSTSVAENQPPGTLVTTLHAIDGD 2734
Query: 130 EGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYEKQQLY 169
G + YS+ E P F ++++TG++R DYE + +
Sbjct: 2735 AGAFGRLRYSLLEAGPGPEGREAFALNSSTGELRARVPFDYEHTESF 2781
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 20/173 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL---------------DPATEHQGPI 76
TL ++A+D D G G ++YR+LD + A +L +PA + +
Sbjct: 1768 TLTMLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQLRIEA 1827
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQN 133
+D G LS+T + + V D ND P F Y VPE G + ++ A D D G N
Sbjct: 1828 RDGGQPALSATLLLTVTVLDANDHAPAFPVPAYSVEVPEDVPAGTLLLQLQAHDPDAGAN 1887
Query: 134 AVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSYL 184
V Y + F+++ ++G++RT ALD E+ Y V + A L
Sbjct: 1888 GHVTYYLGAGTAGAFLLEPSSGELRTAAALDREQCPSYTFSVSAVDGAAAGPL 1940
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 21/147 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNT--DAASYFNLDPAT-----------EHQGPI 76
G + + A D D+G FG + Y LL+ + F L+ +T EH
Sbjct: 2722 GTLVTTLHAIDGDAGAFGRLRYSLLEAGPGPEGREAFALNSSTGELRARVPFDYEHTESF 2781
Query: 77 Q------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ D G LS++ TV++ VT ++ +P F + + F VPEG + G ++G V ATD D
Sbjct: 2782 RLLVGAADAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQVPEGARRGHSLGHVQATDED 2841
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDI 155
G + +V YS+ P F ++ TG +
Sbjct: 2842 GGADGLVLYSLATSSPYFGINQTTGAL 2868
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 64/146 (43%), Gaps = 26/146 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY--------------RLLDNNTDAASY 63
FY A + + G +QV ATD DSG FGL+ Y R+ ++ D +
Sbjct: 582 FYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGSSGSPPFRIDAHSGDVCTT 641
Query: 64 FNLDPATEHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEG 114
LD QGP D GGL S V + ++D ND P+F Y S+ +
Sbjct: 642 RTLD---RDQGPSSFDFTVTAVDGGGLKSMVYVKVFLSDENDNPPQFYPREYAASISAQS 698
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV 140
G AV R+ A D D+G + + Y +
Sbjct: 699 PPGTAVLRLRAHDPDQGSHGRLSYHI 724
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 67/158 (42%), Gaps = 30/158 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPI--- 76
G L+Q++A D D+G G V Y L A F L+P++ Q P
Sbjct: 1871 GTLLLQLQAHDPDAGANGHVTYYL---GAGTAGAFLLEPSSGELRTAAALDREQCPSYTF 1927
Query: 77 -------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-----GQDGLAVGRVH 124
G LS+T +V I V D+ND P F + P +P LA+ +
Sbjct: 1928 SVSAVDGAAAGPLSTTVSVTITVRDVNDHAPTFPTSPLRLRLPRPGPSFSTPTLALATLR 1987
Query: 125 ATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKA 160
A D D G NA + Y + P VD+ TG+IR ++
Sbjct: 1988 AEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARS 2025
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 73/167 (43%), Gaps = 32/167 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQ----- 73
G ++QV+A D G + Y L A+S F L+P + E Q
Sbjct: 1016 GTQVLQVQAQAPDGGP---ITYHLAAEG--ASSPFGLEPQSGWLWVRAALDREAQELYIL 1070
Query: 74 ------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
G + G + TATV + + + N+ +P P +V E Q G +VGRV AT
Sbjct: 1071 KVMAVSGSKAELGQQTGTATVRVSILNQNEHSPRLSEDPTFLAVAENQPPGTSVGRVFAT 1130
Query: 127 DADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
D D G N + YS+ + F + TG++ T + LD E+Q Y
Sbjct: 1131 DRDSGPNGRLTYSLQQLSEDSKAFRIHPQTGEVTTLQTLDREQQSSY 1177
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 71/160 (44%), Gaps = 27/160 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYFN-LDP----------- 68
G + V A D D G+ V YRL L ++T A S LD
Sbjct: 1561 GPAALHVVARDPDLGEAARVSYRLASGGDGHFRLHSSTGALSVVRPLDREQRAEHVLTVV 1620
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
A++H P + S+T + + V D+ND+ P FQ Y + E G ++ + ATD
Sbjct: 1621 ASDHGSPPR-----SATQVLTVSVADVNDEAPTFQQQEYSVLLRENNPPGTSLLTLRATD 1675
Query: 128 ADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQ 167
D G N V Y F +D +TG + T +ALD E+Q+
Sbjct: 1676 PDVGANGQVTYGGVSSESFSLDPDTGVLTTLRALDREEQE 1715
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A +++ + DIND P F Y V E G V +V A+DAD G N V Y +
Sbjct: 239 ALLDVTLLDINDHAPAFNQSRYHAVVSESLAPGSPVLQVFASDADAGVNGAVTYEINRRQ 298
Query: 143 ---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D PF +DA+TG ++ + LD+E+++++
Sbjct: 299 SEGDGPFSIDAHTGLLQLERPLDFEQRRVH 328
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 71/172 (41%), Gaps = 29/172 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH----------QGPI--- 76
G + ++A D DSG V + LL A F +DP T H GP
Sbjct: 910 GTPIYTLRALDPDSGVNSRVTFTLLAGGGGA---FTVDPTTGHVRLMRPLGPSGGPAHEL 966
Query: 77 ----QDEGGLSSTATVNIRVT--DINDKN--PEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D G T+ +RV D+ + P F S Y +P G G V +V A
Sbjct: 967 ELEARDGGSPPRTSHFRLRVVVQDVGTRGLAPRFNSPTYRVDLPSGTTAGTQVLQVQAQA 1026
Query: 128 ADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D G + Y+ E PF ++ +G + ALD E Q+LY+ +V +S
Sbjct: 1027 PDGG--PITYHLAAEGASSPFGLEPQSGWLWVRAALDREAQELYILKVMAVS 1076
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 78/172 (45%), Gaps = 35/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G ++ +V ATD+DSG G + Y L + D+ + F + P T E Q
Sbjct: 1121 GTSVGRVFATDRDSGPNGRLTYSLQQLSEDSKA-FRIHPQTGEVTTLQTLDREQQSSYQL 1179
Query: 76 ---IQDEGG--LSSTATVNIRVTDINDKNPEF--------QSLPYEF--SVPEGQDGLAV 120
+QD G S+T TV++ V D+ND +P F LP + VP G V
Sbjct: 1180 LVQVQDGGSPPRSTTGTVHVAVLDLNDNSPTFLQASGAAGGGLPIQVPDRVPPGT---LV 1236
Query: 121 GRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ A D DEG+N + Y++ P F + ++G++ T L ++ Y+
Sbjct: 1237 TTLQAKDPDEGENGTILYTLTGPGSELFSLHPHSGELLTAAPLIRAERPHYV 1288
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 76/176 (43%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------P 68
Y A + G +++++A D D G G + Y +L N+ F LD P
Sbjct: 690 YAASISAQSPPGTAVLRLRAHDPDQGSHGRLSYHILAGNS--PPLFTLDEQSGLLTVAWP 747
Query: 69 ATEHQGPI-------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGL 118
+ +D GGL + +A V+I + P F+ L Y FSVPE G
Sbjct: 748 LARRANSVVQLEIGAEDGGGLQAEPSARVDISIVPGTPTPPIFEQLQYVFSVPEDVAPGT 807
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
+VG V A + G+ A V S+ P F +DA +G ++T + LD E LE
Sbjct: 808 SVGIVQAHNP-PGRLAPVTLSLSGGDPRGLFSLDAVSGLLQTLRPLDRELLGPVLE 862
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 70/180 (38%), Gaps = 39/180 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + L L+QV+A D D G G + Y L + A F++DP
Sbjct: 2176 YVAFLPESRPLEGPLLQVEADDLDQGSGGQISYSLAASQP-ARGLFHVDPTTGTITTTAI 2234
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
AT+ P L +AT+ + V D ND P P+E V E
Sbjct: 2235 LDREIWAETRLVLMATDRGSP-----ALVGSATLTVMVIDTNDNRPTIPQ-PWELRVSED 2288
Query: 114 GQDGLAVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + +V D D G V++Y S P+D PF V G + LD+E+ Y
Sbjct: 2289 ALLGSEIAQVTGNDVDSG--PVLWYVLSPSGPQD-PFSVGRYGGRVSLTGPLDFEQCDRY 2345
Score = 43.1 bits (100), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------- 68
Y M + G ++ V ATD+DSG G + Y L A F++DP
Sbjct: 2380 LYQVMLLEHTPPGSAILSVSATDRDSGANGHISYHL----ASPADGFSVDPNNGTLFTIV 2435
Query: 69 ---ATEHQGP--------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG- 114
A H G +D G G ++ ATV++++ D ND P F Y +V E
Sbjct: 2436 GTVALGHDGSGAVDVVLEARDHGAPGRAARATVHVQLQDQNDHAPSFTLSHYRVAVTEDL 2495
Query: 115 QDGLAVGRVHATDADEGQ-NAVVYYSV 140
G + + ATDAD + +A V YS+
Sbjct: 2496 PPGSTLLTLEATDADGSRSHAAVDYSI 2522
Score = 42.7 bits (99), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 72/178 (40%), Gaps = 40/178 (22%)
Query: 30 GVTLMQVKATDKDSGK-FGLVEYRLLDNNTDAASYFNLDP----ATEHQGPIQDEGGL-- 82
G TL+ ++ATD D + V+Y ++ N F L+P A E GP G
Sbjct: 2498 GSTLLTLEATDADGSRSHAAVDYSIISGNW--GRVFQLEPRLAEAGESAGPGPRALGCLV 2555
Query: 83 ---------------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
SS V + V D+ND P F Y +VPE
Sbjct: 2556 LLEPLDFESLTQYNLTVAAADRGQPPQSSVVPVTVTVLDVNDNPPVFTRASYRVTVPEDT 2615
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
G + V A+DAD G + +V ++V P F +D ++G +R ALD E Q +
Sbjct: 2616 PVGAELLHVEASDADPGPHGLVRFTVSSGDPSGLFELDESSGTLRLAHALDCETQARH 2673
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 15/93 (16%)
Query: 82 LSSTATVNIRVTDINDKNPEF-------QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
L + A + VTD+ND P F + LP E ++P G V RV A D D+G N
Sbjct: 452 LRAEAAFVLHVTDVNDNAPAFDRQLYRPEPLP-EVALP----GSFVVRVTARDPDQGTNG 506
Query: 135 VVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
V YS+ F +D +G I T +LDYE
Sbjct: 507 QVTYSLAPGAHTHWFSIDPTSGIITTAASLDYE 539
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD-EGQNAVVYYSVPEDIP 145
V ++V D N+ P F P ++PE + G A+ A+DAD G N+ V Y + P
Sbjct: 1422 VQVQVQDENEHAPAFARDPLALALPENPEPGAALYTFRASDADGPGPNSDVRYRLLRQEP 1481
Query: 146 FV----VDANTGDIRTNKALDYEKQQLYL 170
V +DA TG + + LD E L
Sbjct: 1482 PVPALRLDARTGALSAPRGLDRETTPALL 1510
>gi|195483670|ref|XP_002090383.1| GE12832 [Drosophila yakuba]
gi|194176484|gb|EDW90095.1| GE12832 [Drosophila yakuba]
Length = 3570
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------- 68
S Y A + +G +++QV A+D D G G ++Y L D + + S F +DP
Sbjct: 1009 SPLYQASILEDALVGTSVIQVAASDPDVGLNGRIKYLLSDRDMEDGS-FVIDPTSGTIRT 1067
Query: 69 ---------ATEHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
A H I + G LSST V IR+ D+ND P F S VPE
Sbjct: 1068 NKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITLYVPENSP 1127
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV 140
G VG +HA D DEG NAVV+YS+
Sbjct: 1128 VGSVVGEIHAHDPDEGVNAVVHYSI 1152
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 83/178 (46%), Gaps = 27/178 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPATEH--- 72
Y A + +G T++ V ATD D G + Y L + N + F+++P T
Sbjct: 902 YSASVFEDAPVGTTVLVVSATDSDVGVNAQITYSLNEESINGLGSPDPFSINPQTGAIVT 961
Query: 73 QGPIQDE-------------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
P+ E GG LS T V I VTD+ND P F+S Y+ S+ E
Sbjct: 962 NAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPSFKSPLYQASILEDAL 1021
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G +V +V A+D D G N + Y + ED FV+D +G IRTNK LD E ++
Sbjct: 1022 VGTSVIQVAASDPDVGLNGRIKYLLSDRDMEDGSFVIDPTSGTIRTNKGLDRESVAVF 1079
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 83/191 (43%), Gaps = 44/191 (23%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--------FNLDPAT 70
+ A R+ +G T++ ++ATD+D GK +EY + + TD A F +D
Sbjct: 469 FEASIREGATVGSTVITLRATDQDIGKNAEIEYGI-EAVTDGAGLAQDQEMPIFRID--- 524
Query: 71 EHQGPIQDEGGL-------------------------SSTATVNIRVTDINDKNPEFQSL 105
G I L ++TA+V ++V D ND P+F
Sbjct: 525 SRSGVISTRSSLDRETSDSYHLLVTAADLASAQSERRTATASVQVKVLDDNDNYPQFSER 584
Query: 106 PYEFSVPEGQDG----LAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTN 158
Y VPE Q G V + ATDAD+G NA + Y++ F +D+ +GD+
Sbjct: 585 TYTVQVPEDQWGGTEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLV 644
Query: 159 KALDYEKQQLY 169
K LDYE + Y
Sbjct: 645 KPLDYESVRSY 655
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 55/102 (53%), Gaps = 9/102 (8%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG S TATV+I +TD N+ P F++ PY SV E G V V ATD+D G NA +
Sbjct: 873 DSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGVNAQI 932
Query: 137 YYSVPEDI--------PFVVDANTGDIRTNKALDYEKQQLYL 170
YS+ E+ PF ++ TG I TN LD E YL
Sbjct: 933 TYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYL 974
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 73/158 (46%), Gaps = 25/158 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------- 76
T+ ++ATD D G + Y ++ NT S F++D + +
Sbjct: 602 TVAHIRATDADQGNNAAIRYAIIGGNTQ--SQFSIDSMSGDVSLVKPLDYESVRSYRLVI 659
Query: 77 --QDEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
QD G S + T + V D ND P F + ++ SV E G + RV A D+DEG
Sbjct: 660 RAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEG 719
Query: 132 QNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQ 166
NA + YS+ E + P VD TG ++T K LD E+Q
Sbjct: 720 ANAEITYSISERDDNFPLAVDPRTGWVQTIKPLDREEQ 757
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
S T T+ + V D ND +P F++ +E S+ EG G V + ATD D G+NA + Y +
Sbjct: 445 SGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIE 504
Query: 142 -----------EDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+++P F +D+ +G I T +LD E Y
Sbjct: 505 AVTDGAGLAQDQEMPIFRIDSRSGVISTRSSLDRETSDSY 544
Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 29/167 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP-- 75
+G +++V+A D D G + Y + + + + +DP T E QG
Sbjct: 704 VGYNIIRVQAYDSDEGANAEITYSISERDDNFP--LAVDPRTGWVQTIKPLDREEQGRFA 761
Query: 76 ---IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDA 128
+ +GG+ S++++V I V D+ND +P F YE +V E Q G V V ATD
Sbjct: 762 FQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPGTPVTTVTATDP 821
Query: 129 DEGQNAVVYYSVPEDIP---FVVDANTGD--IRTNKALDYEKQQLYL 170
DE ++ ++Y + F + + G I ++LDY++++ +L
Sbjct: 822 DE--DSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFL 866
>gi|431896448|gb|ELK05860.1| Cadherin EGF LAG seven-pass G-type receptor 2 [Pteropus alecto]
Length = 2652
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 84/181 (46%), Gaps = 26/181 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS-YFNLDPAT---EHQG 74
Y R+ E+G ++ V+ATD D+ + YRLL+ + S F +DP + +G
Sbjct: 75 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGPGGSPSEAFEIDPRSGVIRTRG 134
Query: 75 PI------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D G S+TA V + V D ND P+F Y V E
Sbjct: 135 PVDREEVESYQLTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYVVQVREDVT 194
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLER 172
G + RV A+D D+G NA+V+YS+ F +DA TG + LDYE + Y R
Sbjct: 195 PGAPILRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLR 254
Query: 173 V 173
V
Sbjct: 255 V 255
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-------------DAASYFN 65
Y R+ G +++V A+D+D G LV Y ++ N D S +
Sbjct: 185 YVVQVREDVTPGAPILRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 244
Query: 66 LDPATEHQGPIQDEGG----LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
+ E+ ++ + G LS+ + V ++V DIND P F S P++ +V E G
Sbjct: 245 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 304
Query: 120 VGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V A DAD G+NA + Y V D PF ++ TG I LD E+ Y
Sbjct: 305 VLHVQAIDADAGENARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFY 357
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------------AASYFNLDPATEHQ-- 73
+G +++ V A D+D+ ++ Y++ NT + LD E Q
Sbjct: 406 VGTSVVTVSAVDRDA--HSVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYV 463
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G TA V + VTD N P FQS Y +V E + G V + ATD D G
Sbjct: 464 LAVTASDGTRQDTAQVVVNVTDANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 523
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + IP F +DA+TG + T LDYE Q Y
Sbjct: 524 ENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSY 562
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLDPATEHQGPIQ-- 77
+++Q+ ATD+DSG G V Y N + LD Q ++
Sbjct: 614 SVLQISATDRDSGLNGRVFYTFQGGNDGDGDFIVESTSGIVRTLRRLDRENVAQYILRAY 673
Query: 78 --DEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G + + + VT D+ND P F+ ++ V E GLAV RV ATD DEG
Sbjct: 674 AVDKGMPPARTPIEVTVTVLDVNDNPPVFKQDEFDVFVEENSPIGLAVARVTATDPDEGT 733
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 734 NAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYEDRPEYI 774
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSSTA 86
G T++ + ATD+D+G+ + Y + D+ F +D A Q + E +S T
Sbjct: 509 GTTVVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTL 564
Query: 87 TVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
+ R V D+ND P+F Y+ SV E +V ++ ATD D
Sbjct: 565 AITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRD 624
Query: 130 EGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N V+Y+ D F+V++ +G +RT + LD E Y+ R + + K
Sbjct: 625 SGLNGRVFYTFQGGNDGDGDFIVESTSGIVRTLRRLDRENVAQYILRAYAVDK 677
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Query: 76 IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
+QD G S+ AT+ I VTD ND +P F+ Y+ S+ E + G V V ATD D
Sbjct: 42 VQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPP 101
Query: 133 NAVVYYSV---PEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
NA + Y + P P F +D +G IRT +D E+ + Y
Sbjct: 102 NANILYRLLEGPGGSPSEAFEIDPRSGVIRTRGPVDREEVESY 144
Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 32/163 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G+ + +V ATD D G + Y++++ N F LD + + D
Sbjct: 717 IGLAVARVTATDPDEGTNAQIMYQIVEGNI--PEVFQLDIFSGELTALVDLDYEDRPEYI 774
Query: 79 ------EGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRV 123
L S ATV++R+ D ND P + F S P G A+GRV
Sbjct: 775 LVIQATSAPLVSRATVHVRLLDRNDNPPVLGNFEILFNNYVTNRSSSFPGG----AIGRV 830
Query: 124 HATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
A D D + + ++ V ++A+TG++R ++ALD +
Sbjct: 831 PAHDPDISDSLTYSFERGNELSLVLLNASTGELRLSQALDNNR 873
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 32/136 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASY-------------FN 65
LG ++ V+A D D+G+ +EYRL ++N T S F
Sbjct: 301 LGYLVLHVQAIDADAGENARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFYSFG 360
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
++ A +H P L+++A+V++ + D+ND NP F Y + E G +V V
Sbjct: 361 VE-ARDHGTP-----ALTASASVSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVS 414
Query: 125 ATDADEGQNAVVYYSV 140
A D D ++V+ Y +
Sbjct: 415 AVDRDA--HSVITYQI 428
>gi|194213731|ref|XP_001918122.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16 [Equus caballus]
Length = 3293
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 82/162 (50%), Gaps = 28/162 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGP- 75
G +++V A D D G G V Y L + +F++DP + E Q
Sbjct: 484 GSFVVRVMAQDPDQGTNGQVTYSLAPGAHN--RWFSIDPTSGIITTAASLDYELEPQPQL 541
Query: 76 --IQDEGGLS---STATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ +GGL S+ATV++ + D+ND P+FQ Y S+PEG Q G +V ATDAD
Sbjct: 542 IVVATDGGLPPLVSSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDAD 601
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEK 165
G ++ YS+ + PF +DA++GD+ T + LD ++
Sbjct: 602 SGPFGLLSYSLGAGLGASGSPPFRIDAHSGDVCTTRTLDRDQ 643
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 22/161 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT--DAASYFNLDPAT--- 70
SL ++A ++ G + + A D D+G FG + Y LL+ + F L+ +T
Sbjct: 2704 SLLSTSLAENQPP-GTLVTTLHAIDGDAGAFGRLRYSLLEAGPGPEGREAFALNSSTGEL 2762
Query: 71 --------EHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
EH G Q D G LS++ TV++ VT ++ +P F + + F VPEG +
Sbjct: 2763 RARVAFDYEHTGSFQLLVGAADAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQVPEGAR 2822
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDI 155
G ++G V ATD D G + +V YS+ P F ++ TG +
Sbjct: 2823 RGHSLGHVQATDEDGGADGLVLYSLATSSPYFGINQTTGAL 2863
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 78/177 (44%), Gaps = 27/177 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + R+ G +L+ ++ATD D G G V Y + + F+LDP T +Q
Sbjct: 1649 YSVLLRENSPPGTSLLTLRATDSDLGANGQVTYGGI-----SGERFSLDPDTGVLTTLQA 1703
Query: 78 ---------------DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
+GG L + TV + V D ND P F S VPEGQD
Sbjct: 1704 LDREEEEEINLTVYARDGGSPPLLTHVTVRVAVEDENDHAPTFGSAHLSLEVPEGQDPQI 1763
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ + A+D D G N + Y + + P FV+D +G+ T + LD E + + ++
Sbjct: 1764 LTTLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQMKI 1820
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 74/162 (45%), Gaps = 28/162 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQ 73
+G L+ V+A+D D G GLV + L ++ D F LD ++ +HQ
Sbjct: 2612 VGAELLHVEASDADPGPHGLVRFTL--SSGDPLGLFELDESSGALRLTRPLDCETQAQHQ 2669
Query: 74 GPIQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
+Q G + A V I V D+ND +P F S+ E Q G V +HA D D
Sbjct: 2670 LVVQAADPAGAHFALAPVTIEVQDVNDHSPAFPLSLLSTSLAENQPPGTLVTTLHAIDGD 2729
Query: 130 EGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYE 164
G + YS+ E P F ++++TG++R A DYE
Sbjct: 2730 AGAFGRLRYSLLEAGPGPEGREAFALNSSTGELRARVAFDYE 2771
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 64/146 (43%), Gaps = 26/146 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY--------------RLLDNNTDAASY 63
FY A + + G +QV ATD DSG FGL+ Y R+ ++ D +
Sbjct: 577 FYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGASGSPPFRIDAHSGDVCTT 636
Query: 64 FNLDPATEHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEG 114
LD QGP D GGL S V + V+D ND P+F Y S+ +
Sbjct: 637 RTLD---RDQGPSSFDFTVTAVDGGGLKSMVYVKVFVSDENDNRPQFYPREYAASLSAQS 693
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV 140
G AV RV A D D+G + + Y +
Sbjct: 694 APGTAVLRVRAHDPDQGPHGRLSYHI 719
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 77/172 (44%), Gaps = 20/172 (11%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL---------------DPATEHQGPIQ 77
L ++A+D D G G ++YR+LD + A +L +PA + + +
Sbjct: 1764 LTTLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQMKIEAR 1823
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNA 134
D G LS+T V + V D ND P F Y VPE G + ++ A D D G N
Sbjct: 1824 DGGQPALSATLLVTVTVLDANDHAPAFPVPAYSVEVPEDAPAGTLLLQLQAHDPDAGANG 1883
Query: 135 VVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSYL 184
V Y + F+++ ++G++RT ALD E+ Y V + A L
Sbjct: 1884 HVTYYLGAGAAGAFLLEPSSGELRTAAALDREQCASYAFSVSAVDGAAAGPL 1935
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 73/167 (43%), Gaps = 32/167 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQ----- 73
G ++QV+A D G V Y L + +S F L+P + E Q
Sbjct: 1011 GTQVLQVQARAPDGGP---VTYHLAADGP--SSPFGLEPQSGWLWVRAALDREAQELYTL 1065
Query: 74 ------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
G + G + TATV I + + ND +P P +V E Q G +VGRV AT
Sbjct: 1066 KVMAVSGSKAELGQQTGTATVRISILNQNDHSPRLSEEPTFLAVAENQPPGTSVGRVFAT 1125
Query: 127 DADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
D D G N + YS+ + F + TG++ T + LD E+Q Y
Sbjct: 1126 DRDSGPNGRLTYSLRQLSEDSKAFRIHPQTGEVTTLQTLDRERQSSY 1172
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A +++ + DIND P F Y V E G V +V+A+DAD G N V Y +
Sbjct: 234 ALLDVTLLDINDHAPAFNQSRYHAVVSESLAPGSPVLQVYASDADAGANGAVTYEINRRQ 293
Query: 143 ---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D PF +DA+TG +R + LD+E+++++
Sbjct: 294 SEGDGPFSIDAHTGLLRLERPLDFEQRRVH 323
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 74/160 (46%), Gaps = 27/160 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYF-NLDP----------- 68
G T + V A D D G+ V YRL L ++T A S +LD
Sbjct: 1556 GPTALHVVARDPDLGEAARVSYRLAAGGDGYFRLHSSTGALSVVRSLDREQRAEHVLTVV 1615
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
A++H P + S+T + I V DIND+ P FQ Y + E G ++ + ATD
Sbjct: 1616 ASDHGSPPR-----SATQLLTISVADINDEAPAFQQQEYSVLLRENSPPGTSLLTLRATD 1670
Query: 128 ADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQ 167
+D G N V Y F +D +TG + T +ALD E+++
Sbjct: 1671 SDLGANGQVTYGGISGERFSLDPDTGVLTTLQALDREEEE 1710
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 30/158 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQDE------- 79
G L+Q++A D D+G G V Y L AA F L+P++ + E
Sbjct: 1866 GTLLLQLQAHDPDAGANGHVTYYL---GAGAAGAFLLEPSSGELRTAAALDREQCASYAF 1922
Query: 80 ----------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-----VGRVH 124
G LS+T V I V D+ND P F + P +P L+ + +
Sbjct: 1923 SVSAVDGAAAGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGPSLSTPTLPLATLR 1982
Query: 125 ATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKA 160
A D D G NA + Y + P VD+ TG+IR ++
Sbjct: 1983 AEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARS 2020
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 78/179 (43%), Gaps = 32/179 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG---- 74
Y A + G +++V+A D D G G + Y +L N+ F LD EH G
Sbjct: 685 YAASLSAQSAPGTAVLRVRAHDPDQGPHGRLSYHILAGNS--PPLFALD---EHSGLLTV 739
Query: 75 --PI--------------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ QD GGL + +A VNI + P F+ L Y FSVPE
Sbjct: 740 AWPLARRANSVVQLEIGAQDGGGLQAEPSARVNISIVPGTPIPPIFEQLQYVFSVPEDVA 799
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
G +VG V A + G+ V +++ P F +D +G ++T + LD E LE
Sbjct: 800 PGTSVGMVQAHNP-PGRLGPVTFTLSGGDPRGLFSLDGASGLLQTLRPLDRELLGPVLE 857
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 71/178 (39%), Gaps = 46/178 (25%)
Query: 30 GVTLMQVKATDKDSGK-FGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------ 82
G TL+ ++ATD D + V+Y ++ N F L+P G + GGL
Sbjct: 2493 GSTLLTLEATDADGSRTHATVDYSIVSGNR--GRVFQLEPRLAETG---EGGGLGPRALG 2547
Query: 83 ------------------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
SS V + V D+ND P F Y +VP
Sbjct: 2548 CLVLLEPLDFESLTQYNLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASYRMAVP 2607
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQ 166
E G + V A+DAD G + +V +++ P F +D ++G +R + LD E Q
Sbjct: 2608 EDTPVGAELLHVEASDADPGPHGLVRFTLSSGDPLGLFELDESSGALRLTRPLDCETQ 2665
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 35/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G ++ +V ATD+DSG G + Y L + D+ + F + P T E Q
Sbjct: 1116 GTSVGRVFATDRDSGPNGRLTYSLRQLSEDSKA-FRIHPQTGEVTTLQTLDRERQSSYQL 1174
Query: 76 ---IQDEGG--LSSTATVNIRVTDINDKNPEF--------QSLPYEF--SVPEGQDGLAV 120
+QD G S+T TV+I V D+ND +P F LP + VP G V
Sbjct: 1175 LVQVQDAGSPPRSTTGTVHIAVLDLNDNSPTFLQASGAAGGGLPIQVPDRVPPGT---LV 1231
Query: 121 GRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ A D DEG+N + Y++ P F + ++G++ T L ++ Y+
Sbjct: 1232 TTLQAKDPDEGENGTILYTLTGPGSELFSLHPHSGELLTAAPLIRAERPHYV 1283
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 66/147 (44%), Gaps = 28/147 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------- 68
Y M + G ++ V ATD+DSG G + Y L +A F++DP
Sbjct: 2375 LYQVMLLEHTPPGSAILSVSATDRDSGANGHISYHL----ASSAEGFSVDPNNGTLFTTL 2430
Query: 69 ---ATEHQGP--------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG- 114
A +GP +D G G ++ ATV++++ D ND P F Y +V E
Sbjct: 2431 GTVALGREGPGVVDVVLEARDHGMPGRAARATVHVQLQDQNDHAPSFTLPHYRVAVAEDL 2490
Query: 115 QDGLAVGRVHATDADEGQ-NAVVYYSV 140
G + + ATDAD + +A V YS+
Sbjct: 2491 PPGSTLLTLEATDADGSRTHATVDYSI 2517
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 15/93 (16%)
Query: 82 LSSTATVNIRVTDINDKNPEF-------QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
L + AT + VTD+ND P F + LP E ++P G V RV A D D+G N
Sbjct: 447 LRAEATFVLHVTDVNDNAPAFDRQLYRPEPLP-EVALP----GSFVVRVMAQDPDQGTNG 501
Query: 135 VVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
V YS+ + F +D +G I T +LDYE
Sbjct: 502 QVTYSLAPGAHNRWFSIDPTSGIITTAASLDYE 534
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 71/180 (39%), Gaps = 39/180 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + L L+QV+A D D G G + Y L + A F++DP
Sbjct: 2171 YVAFLPESRPLEGPLLQVEADDLDQGPSGQISYSLAASQP-ARGLFHVDPATGTITTTAI 2229
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
AT+ P L +AT+ + V D ND P P+E V E
Sbjct: 2230 LDREIWAETRLVLMATDRGSP-----ALVGSATLTVMVIDTNDNRPTIPQ-PWELRVSED 2283
Query: 114 GQDGLAVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + +V D D G V++Y S P+D PF + G + LD+E++ Y
Sbjct: 2284 ALLGSEIAQVTGNDVDSG--PVLWYVLSPSGPQD-PFSIGRYGGRLSLTGPLDFEQRDRY 2340
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 69/173 (39%), Gaps = 31/173 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH----------QGPI--- 76
G + ++A D DSG V + LL A F +DP H GP
Sbjct: 905 GTLIYTLRALDPDSGVNSRVTFTLLAGGGGA---FTVDPTMGHVRLMGSLGPPGGPAHEL 961
Query: 77 ----QDEGGLSSTATVNIRVT--DINDKN--PEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
+D G T+ +RV D+ + P F S Y +P G G V +V A
Sbjct: 962 ELEARDGGSPPRTSHFRLRVVVQDLGTRGLAPHFDSPTYRVDLPSGTIPGTQVLQVQARA 1021
Query: 128 ADEGQNAVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D G V Y + D PF ++ +G + ALD E Q+LY +V +S
Sbjct: 1022 PDGGP---VTYHLAADGPSSPFGLEPQSGWLWVRAALDREAQELYTLKVMAVS 1071
Score = 38.9 bits (89), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD-EGQNAVVYYSVPEDIP 145
V +RV D N+ P F P ++PE + G A+ A+DAD G N+ V Y + P
Sbjct: 1417 VQVRVQDENEHAPAFARDPLALALPENPEPGAALYTFRASDADGPGPNSDVRYRLLRQEP 1476
Query: 146 FV----VDANTGDIRTNKALDYEKQQLYL 170
V +DA TG + + LD E L
Sbjct: 1477 PVPALRLDARTGALSAPRGLDRETTPALL 1505
>gi|194208467|ref|XP_001502920.2| PREDICTED: protocadherin Fat 4 isoform 1 [Equus caballus]
Length = 4981
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F +DP + E +
Sbjct: 1756 GSKIMQLTAMDADEGANALVTYTIISGADDS---FRIDPESGDLIATKRLDRERRSKYSL 1812
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G SS +NI V+D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1813 LVRADDGLQSSDMRINITVSDVNDHTPKFSRPVYSFDIPEDTTPGSLVAAILATDDDSGV 1872
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG + LDYE QQ Y+ V
Sbjct: 1873 NGEITYIVSEDDEDGIFFLNPVTGVFNLTRILDYEAQQYYILTV 1916
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 75/173 (43%), Gaps = 21/173 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN------TDAASY-------- 63
FY A + +++V A+D D G GL+ Y ++ N D+ S
Sbjct: 1214 FYQATISESAANLTQVLRVSASDVDEGNNGLIHYYVIKGNEERQFAIDSTSGQVTLIGKL 1273
Query: 64 -FNLDPATEHQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
+ PA D G L+ST T+NI + D ND P F V E + G
Sbjct: 1274 DYEATPAYSLVIQAVDSGATSLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGEL 1333
Query: 120 VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD+D G NA ++YS+ F + NTG I K LD+E Q LY
Sbjct: 1334 VSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSIFLAKKLDFETQSLY 1386
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +ATD DSG +EY LL+ + S +D G + D
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLMVVATD 2128
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y+ + E G + +V ATD DEG N
Sbjct: 2129 KGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVCATDGDEGTNGQ 2188
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V Y + + + F +D+ TG I K LD EK Y V
Sbjct: 2189 VRYGIVDGDANQEFRIDSVTGAITVAKPLDREKTPTYFLTV 2229
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 38 ATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGGLSSTAT--- 87
ATD D G G+ YR++ N A F LD G + +GGL T
Sbjct: 159 ATDSDIGSNGVDHRSYRIIQGN--EAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQY 216
Query: 88 -------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
VN+ V DIND P F S Y+ VPE G +V +V A D
Sbjct: 217 QLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAAVGSSVLQVAAAD 276
Query: 128 ADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ADEG NA + Y + E PF +D TG I + LD+E ++ Y
Sbjct: 277 ADEGTNADIRYRLQDEGTPFQMDPETGLITVREPLDFEARRQY 319
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 75/162 (46%), Gaps = 23/162 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI----QDEGGL--- 82
G L+ + ATD D G G V + L + TD S F LD + I ++E G
Sbjct: 599 GTELLVLGATDGDLGDNGTVRFSLQEAETDQRS-FRLDSVSGRLSTISSLDREEQGFYSL 657
Query: 83 ------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
SS A +N+ + D+ND +P F + Y + E + G + + V ATD D
Sbjct: 658 LVLATDLGSPPQSSIARINVSLLDVNDNSPVFYPVQYFAHIQENEPGGSYITTVSATDPD 717
Query: 130 EGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V YS+ + F V+A +G I T ALD E++ Y
Sbjct: 718 LGLNGTVRYSISAGDRSRFQVNAQSGVISTRMALDREEKTAY 759
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 22/168 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y ++D + F ++P+T
Sbjct: 2774 SQIFSAHVLENSPLGYTVTRVTTSDEDIGINAISRYSVMDTSLP----FTINPSTGDIVI 2829
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V I VTD+ND P F Y PE + G
Sbjct: 2830 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPELTEIGS 2889
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
V +V A+D DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 2890 KVTQVSASDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQVLKYQN 2937
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 82/188 (43%), Gaps = 23/188 (12%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF---NLDPAT 70
D L Y + + +V+A DKDSG G + Y + + NT DA F L +
Sbjct: 997 DQLSYEVTLSESEPVNSRFFKVQAFDKDSGANGEIAYSIAEGNTGDAFGIFPDGQLYIKS 1056
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E +QD LS+T V I + D+ND P F S Y F E Q G
Sbjct: 1057 ELDRELQDRYVLLVIASDRAVEPLSATVNVTIILEDVNDNRPLFNSTNYTFYFEEEQRAG 1116
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLER---V 173
+VG+V A D D G N V YS P F + A +G+I + D ++ L +R V
Sbjct: 1117 SSVGKVSALDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTRQFD--RESLMRQRGTAV 1174
Query: 174 FLISKFAT 181
F + AT
Sbjct: 1175 FSFTVIAT 1182
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 27/165 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGPI--- 76
G ++QV ATD D G G V Y ++D DA F +D P + P
Sbjct: 2170 GTDIIQVCATDGDEGTNGQVRYGIVDG--DANQEFRIDSVTGAITVAKPLDREKTPTYFL 2227
Query: 77 ----QDEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDA 128
D G + T+TV+I + DIND P F+ PY +VPE L + +V A D
Sbjct: 2228 TVQATDRGSTPRTDTSTVSIVLLDINDFVPIFELSPYSVNVPENLGTLPRTILQVVARDD 2287
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D+G N+ + Y + ED F + A +G++R ++LD E ++ ++
Sbjct: 2288 DQGSNSKLSYVLFGGNEDNAFTLSA-SGELRVTQSLDRETKEHFV 2331
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V A DKDSG G ++Y +++ N + + F+++ AT I+
Sbjct: 2687 ILTVLAMDKDSGPNGQLDYEIVNGNKEHS--FSINHATGEIRSIRPLDREKISQYVLTIK 2744
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQN 133
D+G S + +V I + D ND P F + + G V RV +D D G N
Sbjct: 2745 SSDKGSPSQSTSVKVIINILDENDNAPRFSQIFSAHVLENSPLGYTVTRVTTSDEDIGIN 2804
Query: 134 AVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
A+ YSV + +PF ++ +TGDI ++ L+ E Y RV
Sbjct: 2805 AISRYSVMDTSLPFTINPSTGDIVISRPLNREDTDRYRIRV 2845
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI----Q 77
T++QV A D D G + Y L N D A + LD T+ +
Sbjct: 2278 TILQVVARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELRVTQSLDRETKEHFVLVITAT 2337
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNA 134
D G L+ T T+N+ V DIND P F S Y ++PE G V V+A+DAD NA
Sbjct: 2338 DAGSPALTGTGTINVIVDDINDNVPTFPSKMYLTTIPEDAPTGTDVLLVNASDADASTNA 2397
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V+ + + F ++ +TG I T+ LD E ++ Y
Sbjct: 2398 VIRL-IGGNSQFTINPSTGQIITSALLDRETKENY 2431
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 78/162 (48%), Gaps = 22/162 (13%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQGPI 76
++G L++V A D KD G VEY + LDNNT S + + +Q +
Sbjct: 2997 KVGTKLIKVTAVDDKDFGLNSEVEYFISSENHLGKFKLDNNTGWISVASSLISDLNQNFL 3056
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D+G LSS ATV I VT+ N PEF ++PE G V V A D
Sbjct: 3057 ITVTAKDKGNPPLSSQATVQIIVTEENYHTPEFSQSHMSATIPESHSIGATVRTVSARDR 3116
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQ 167
D N ++ YS+ E+ F ++++TG + KALDYE Q
Sbjct: 3117 DAAMNGLIRYSISSGNEEGIFAINSSTGVLTLAKALDYELCQ 3158
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 76/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3210 GTTVIHLNATDDDSGTNAVIAYTIQSSDSD---LFVIDPNT---GVITTQGFLDFETKQS 3263
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S ATVNI++ N+ P F S Y F + E G VG V A+
Sbjct: 3264 YHLTVKAFNVPDEERCSFATVNIQLRGTNEYVPRFVSKLYYFEISEAAPKGTVVGEVFAS 3323
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F ++ TG I + LD EK+ ERV L
Sbjct: 3324 DRDLGTDGEVHYLIFGNSRKKGFQINKKTGQIYVSGLLDREKE----ERVSL 3371
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 38/190 (20%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEY---------------------RLLDNNT----D 59
++ G ++ +V A DKD G G V Y R D +
Sbjct: 1111 EEQRAGSSVGKVSALDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTRQFDRESLMRQR 1170
Query: 60 AASYFNLDPATEHQG---PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ F+ QG P++D+ ATV++ + DIND P+F Y+ ++ E
Sbjct: 1171 GTAVFSFTVIATDQGLPQPLKDQ------ATVHVYMKDINDNAPKFLKDFYQATISESAA 1224
Query: 117 GLA-VGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLER 172
L V RV A+D DEG N +++Y V E+ F +D+ +G + LDYE Y
Sbjct: 1225 NLTQVLRVSASDVDEGNNGLIHYYVIKGNEERQFAIDSTSGQVTLIGKLDYEATPAYSLV 1284
Query: 173 VFLISKFATS 182
+ + ATS
Sbjct: 1285 IQAVDSGATS 1294
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G T+ V A D+D+ GL+ Y + N + A + +
Sbjct: 3096 ATIPESHSIGATVRTVSARDRDAAMNGLIRYSISSGNEEGIFAINSSTGVLTLAKALDYE 3155
Query: 68 PATEHQGPIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEF---SVPEGQDGLAVGR 122
+H+ I D G ++ T ++ V ++ + LP E+ + G V
Sbjct: 3156 LCQKHEMTISATDGGWVARTGYCSVTVNVVDVNDNSPVFLPDEYFPTVLENAPSGTTVIH 3215
Query: 123 VHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATD D G NAV+ Y++ D+ FV+D NTG I T LD+E +Q Y
Sbjct: 3216 LNATDDDSGTNAVIAYTIQSSDSDL-FVIDPNTGVITTQGFLDFETKQSY 3264
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 68/171 (39%), Gaps = 32/171 (18%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPATEHQGPIQ 77
+ + G ++ Q KA D D G G+V Y L N N + L P H G Q
Sbjct: 904 ENWQTGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFTINEKNGNISLLGPLDVHAGSYQ 963
Query: 78 DE--------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
E LSS+ + + V D+ND P F L YE ++ E + +V A D
Sbjct: 964 IEILASDMGVPQLSSSFILTVYVHDVNDNPPVFDQLSYEVTLSESEPVNSRFFKVQAFDK 1023
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYL 170
D G N + YS+ E NTGD + LD E Q Y+
Sbjct: 1024 DSGANGEIAYSIAE-------GNTGDAFGIFPDGQLYIKSELDRELQDRYV 1067
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1724 AEVEITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTYTIISGA 1783
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ K LD E++ Y
Sbjct: 1784 DDSFRIDPESGDLIATKRLDRERRSKY 1810
Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
G ++ VNI V D+ND +P F Q++ V Q G ++ + A D DEG N +V Y
Sbjct: 871 GTVTGDTMVNITVKDLNDNSPHFLQAVESVNVVENWQTGHSIFQAKAVDPDEGVNGMVLY 930
Query: 139 SV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
S+ P+++ F ++ G+I LD +E
Sbjct: 931 SLKQNPKNL-FTINEKNGNISLLGPLDVHAGSYQIE 965
Score = 42.4 bits (98), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV- 140
SS ++I V D+ND +P F+ P+ + E + V A D D G N + Y +
Sbjct: 2649 FSSYEKLDITVLDVNDNSPIFKEDPFVSEILENLSPRKILTVLAMDKDSGPNGQLDYEIV 2708
Query: 141 --PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
++ F ++ TG+IR+ + LD EK Y+
Sbjct: 2709 NGNKEHSFSINHATGEIRSIRPLDREKISQYV 2740
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 70/173 (40%), Gaps = 25/173 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNN----------TDAASYFNLDP 68
LG T++ TD D G + Y + +D N ++ S++NL
Sbjct: 1959 LGSTVLVFNVTDADDGINSQLAYSIASGDSLGQFTVDKNGVLKVLKALDRESQSFYNL-V 2017
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
H P +STA V+I + D+ND P F S P +PE V + ATD
Sbjct: 2018 VQVHDLPQLPASRFTSTAQVSIILLDVNDNPPTFLS-PKLTYIPENTPIDTVVFKAQATD 2076
Query: 128 ADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
D G N+ + Y++ P F + G++R LD E+ Y V K
Sbjct: 2077 PDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLMVVATDK 2129
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N V Y + +
Sbjct: 1515 VTILVTDLNDNVPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEVEYEIINGDTDT 1574
Query: 146 FVVDANTGDIRTNKAL 161
F+VD +GD+R AL
Sbjct: 1575 FIVDRYSGDLRVASAL 1590
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG + Y + N F++ P T E Q
Sbjct: 1329 RIGELVSSVTATDSDSGDNADLHYSITGTNNHGT--FSISPNTGSIFLAKKLDFETQSLY 1386
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G SST +V I V D ND P F S+ E G +V V A D
Sbjct: 1387 KLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVTARD 1446
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + Y++ + +P F +D G I TN +D E L+
Sbjct: 1447 PDADINGQLSYTIVQQMPRGNHFGIDEVKGTIYTNAEIDREFANLF 1492
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 66/174 (37%), Gaps = 20/174 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G V Y + + ++ LD
Sbjct: 694 YFAHIQENEPGGSYITTVSATDPDLGLNGTVRYSISAGDRSRFQVNAQSGVISTRMALDR 753
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V I V D D P F Y F V E G VG
Sbjct: 754 EEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAYSFVVFENVALGYHVG 813
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A+ D N + Y D F ++ TG + T +D E+Q Y +V
Sbjct: 814 SVSASTMDLNSN-ISYLITTGDQKGMFAINQVTGQLTTASVIDREEQSFYQLKV 866
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV 140
SS A++ I V DIND P F Y ++ E G V V ATD D G NA + YS+
Sbjct: 456 SSVASLVIFVNDINDHPPVFAQQVYRVNLSEEAPPGSYVSGVSATDGDSGLNANLRYSI 514
>gi|13929168|ref|NP_114007.1| protocadherin Fat 1 precursor [Rattus norvegicus]
gi|4426629|gb|AAD20459.1| protocadherin [Rattus norvegicus]
Length = 4589
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 80/156 (51%), Gaps = 24/156 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPATEHQGPIQ---- 77
L ++QVKATD+DSG +G + Y L+++ D F L+ + + P +
Sbjct: 2508 LHTLVVQVKATDRDSGIYGHLTYHLVNDFAKDRFYVNDGGQVFTLE-RLDREAPAEKVIS 2566
Query: 78 ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADE 130
D GG + TVN+ +TD ND P+F+S YE +V G +V +V A+DADE
Sbjct: 2567 VRLMAKDAGGKVAFCTVNVILTDDNDNAPQFRSTKYEVNVGSSAAKGTSVVKVFASDADE 2626
Query: 131 GQNAVVYYSVPEDIPFV-----VDANTGDIRTNKAL 161
G NA V Y++ D V ++ TG I T ++L
Sbjct: 2627 GSNADVTYAIEADSESVEENLEINQLTGLITTKESL 2662
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 75/160 (46%), Gaps = 23/160 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQV ATD D + Y L + A F L+P T E Q
Sbjct: 3040 GKLVMQVSATDADIRSNAEITYTLFGS---GAEKFKLNPDTGELRTLALLDREEQAVYHL 3096
Query: 78 -----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D GG S AT+ + + D+ND PEF + PY +V E + G + RV ATDAD G
Sbjct: 3097 LVKATDGGGRSCQATIVLTLEDVNDNTPEFTADPYAITVFENTEPGTPLTRVQATDADAG 3156
Query: 132 QNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
N + YS+ + D F ++ +G ++ K LD E Q +Y
Sbjct: 3157 LNRKISYSLLDSADGQFSINEQSGILQLEKHLDRELQAVY 3196
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 85/181 (46%), Gaps = 39/181 (21%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL---------------------DN 56
++ ++ DK E+ ++QV+ATDKD G G V Y +L D
Sbjct: 828 YFVEVSEDK-EINSEIIQVEATDKDLGPSGHVTYAILTDTEKFAIDRVTGVVKIIQPLDR 886
Query: 57 NTDAASYFNL---DPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
Y + D ATE E LSST + + + D+ND P F +P +SV
Sbjct: 887 EVQRVHYLKIEARDQATE-------EPWLSSTVLLKVSLDDVNDNPPRF--IPPSYSVKV 937
Query: 114 GQD---GLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQL 168
+D G + + A D D GQ++ V YS+ + + F VD +G +R + LD+EK+QL
Sbjct: 938 REDLPEGTIIMWLEAHDPDVGQSSQVRYSLLDHGEGHFDVDKLSGAVRIVQQLDFEKKQL 997
Query: 169 Y 169
Y
Sbjct: 998 Y 998
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 74/167 (44%), Gaps = 21/167 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--------TDAASYF---NLD 67
YGA + +G ++QV A +D + Y ++ N + + F NLD
Sbjct: 3236 YGATVSEDIVIGTEVLQVYAASRDIEANAEITYAIISGNEHGKFSIDSKTGAIFIIENLD 3295
Query: 68 PATEHQGPIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAV 120
+ H + E GG LS ATVNI +TDIND +P F Y V E V
Sbjct: 3296 YESSHGYYLTVEATDGGTPSLSDVATVNINITDINDNSPVFSQDSYTTVVSEDAALEQPV 3355
Query: 121 GRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYE 164
+ A DAD N+ + YS+ E PF +D G+I+ K LD E
Sbjct: 3356 ITIMADDADGPSNSHILYSIIEGNQGSPFTIDPVRGEIKVTKPLDRE 3402
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 82/186 (44%), Gaps = 35/186 (18%)
Query: 11 EMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT 70
E T+D Y + E G L +V+ATD D+G + Y LLD+ A F+++
Sbjct: 3125 EFTADP--YAITVFENTEPGTPLTRVQATDADAGLNRKISYSLLDS---ADGQFSIN--- 3176
Query: 71 EHQGPIQ--------------------DEG---GLSSTATVNIRVTDINDKNPEFQSLPY 107
E G +Q D+G L++T TV + V DIND P F+ Y
Sbjct: 3177 EQSGILQLEKHLDRELQAVYTLTLKAADQGLPRKLTATGTVVVSVLDINDNPPVFEYREY 3236
Query: 108 EFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDY 163
+V E G V +V+A D NA + Y++ E F +D+ TG I + LDY
Sbjct: 3237 GATVSEDIVIGTEVLQVYAASRDIEANAEITYAIISGNEHGKFSIDSKTGAIFIIENLDY 3296
Query: 164 EKQQLY 169
E Y
Sbjct: 3297 ESSHGY 3302
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 96 NDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP--EDIPFVVDANT 152
N PEF Y+ S E G V RV A D DEG+N V YS+ +PFV+D T
Sbjct: 458 NSNPPEFTQTSYKASFDENAPVGTPVMRVSAVDPDEGENGYVTYSIANLNHVPFVIDHFT 517
Query: 153 GDIRTNKALDYEKQQLYLERVFLISKFATSY 183
G + T++ LDYE + RV+ + A+ +
Sbjct: 518 GAVSTSENLDYE----LMPRVYTLRIRASDW 544
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVY 137
+G SS A V ++V D ND +P + Y ++PE G V +V ATDAD NA +
Sbjct: 3001 DGTFSSKARVEVKVLDANDNSPVCERTAYSDAIPEDALPGKLVMQVSATDADIRSNAEIT 3060
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ F ++ +TG++RT LD E+Q +Y
Sbjct: 3061 YTLFGSGAEKFKLNPDTGELRTLALLDREEQAVY 3094
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 74/162 (45%), Gaps = 28/162 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASY--FNLDPATE-------------HQGPI- 76
++Q+ A D+D K L+ L ++ D AS F LDPAT HQ +
Sbjct: 1476 ILQISAVDRDE-KNKLI--YTLQSSIDPASLKKFRLDPATGALYTSEKLDHEAIHQHVLT 1532
Query: 77 -----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
QD + A + + V+D+ND +P F S YE V E G V +V A D D+
Sbjct: 1533 VMVRDQDVPVKRNFARIIVNVSDMNDHSPWFTSSSYEGRVYESAAVGSVVLQVTALDRDK 1592
Query: 131 GQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
G+NA V YS+ F +D G I+T + LD Q Y
Sbjct: 1593 GRNAEVLYSIESGNIGNSFTIDPILGSIKTARELDRSHQVDY 1634
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 88 VNIRVTDINDKNPEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE---- 142
V+I+V D ND +P +S PYE F V G V +V A+D D G N V YS+ +
Sbjct: 2796 VSIQVKDANDNSPVLESNPYEAFIVENLPAGSRVIQVRASDLDSGVNGQVMYSLDQSQDA 2855
Query: 143 DI--PFVVDANTGDIRTNKALDYEKQQLYLERV 173
DI F ++ TG I T K LD+E++ Y +V
Sbjct: 2856 DIIESFAINMETGWITTLKELDHEERASYQIKV 2888
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 79/185 (42%), Gaps = 38/185 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA------------------ 60
Y A + G ++QV+A+D DSG G V Y L D + DA
Sbjct: 2815 YEAFIVENLPAGSRVIQVRASDLDSGVNGQVMYSL-DQSQDADIIESFAINMETGWITTL 2873
Query: 61 --------ASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
ASY A++H +Q LSSTA V++ VTD+ND P F + Y+ +V
Sbjct: 2874 KELDHEERASYQIKVVASDHGEKVQ----LSSTAIVDVTVTDVNDSPPRFTAEIYKGTVS 2929
Query: 113 EGQ-DGLAVGRVHATDAD--EGQNAVVYYSVPEDI--PFVVDANTGDIR--TNKALDYEK 165
E G + + TDAD E V Y+ D F V+ D R K LD E+
Sbjct: 2930 EDDPPGGVIAILSTTDADSEEINRQVSYFITGGDALGQFAVENMQNDWRVYVKKPLDREQ 2989
Query: 166 QQLYL 170
+ YL
Sbjct: 2990 KDSYL 2994
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 27/181 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EH 72
SL G ++ +G +++ + ATD DSG G + Y + N D S F +D T +
Sbjct: 720 SLPTGIEVKEDLPVGASILFMNATDLDSGFNGKLVYAISGGNDD--SCFTVDMETGMLKV 777
Query: 73 QGPIQDEGGLSSTATVNIRVTDI------------------NDKNPEFQSLPYEFSVPEG 114
P+ E ++ T+NI V D+ ND PEF Y V E
Sbjct: 778 LSPLDRE--VTDKYTLNITVYDLGIPQRAAWRLLDVTVLDANDNAPEFLQESYFVEVSED 835
Query: 115 QD-GLAVGRVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYLER 172
++ + +V ATD D G + V Y++ D F +D TG ++ + LD E Q+++ +
Sbjct: 836 KEINSEIIQVEATDKDLGPSGHVTYAILTDTEKFAIDRVTGVVKIIQPLDREVQRVHYLK 895
Query: 173 V 173
+
Sbjct: 896 I 896
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 34/178 (19%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-- 70
TS+ ++Y + + + V+++Q++A D DS + YR+ N +F++ P T
Sbjct: 1140 TSEPVYYPEIMENSPK-DVSVVQIEAFDPDSSSSDKLTYRITSGNPQG--FFSIHPKTGL 1196
Query: 71 --------------EH--QGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH + + D G S+ A V +++ D ND P+F Y+ +P
Sbjct: 1197 ITTTSRKLDREQQDEHILEVTVTDNGVPPRSTIARVIVKILDENDNRPQFLQKFYKIRLP 1256
Query: 113 EGQ--DG------LAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNK 159
E + DG + RV A D DEG NA + YS+ E F ++ TG + + K
Sbjct: 1257 EREKADGDRSAKREPLYRVIAADKDEGPNAELSYSIEEGNEHGRFSIEPKTGVVSSKK 1314
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 28/175 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
+L Y A+ + E+G + V A D+DSG+ G V Y L +++ +F + P+
Sbjct: 2084 NLPYYAVVKVDAEVGHVIRHVTAIDRDSGRNGDVHYYLKEHH----DHFEIGPSGDISLK 2139
Query: 71 ---EHQG---------PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
EH +D G + +A V + +T +N P F+ Y +PE Q
Sbjct: 2140 KQFEHDTLNKEYLVTVVAKDGGNPAFSAEVLVPITVMNKAMPVFEKAFYSAEIPENVQTH 2199
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
V V A ++ EG V+YS+ + P F ++ NTG I LD+E Y
Sbjct: 2200 SPVVHVQA-NSPEGLK--VFYSITDGDPFSQFTINFNTGVINVIAPLDFESHPAY 2251
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 11/101 (10%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR--------VHATDADEG 131
GLS+ TV + + D ND P F Y + E +V + ATDAD
Sbjct: 1744 AGLSTNTTVVVHIQDENDNPPAFTRAEYSGFISESASVNSVVLTDKNVPLVIRATDADRE 1803
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
NA++ Y + E F +D TG I T +LDYE+ +++
Sbjct: 1804 SNALLVYQIVEPSVHNYFAIDPTTGAIHTVLSLDYEETRVF 1844
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI 144
A V ++V D ND P F Y S+PE ++ RV ATDAD G N YYS +
Sbjct: 134 AKVRVQVLDTNDLRPLFSPTSYSVSLPENTAIRTSIARVSATDADIGTNGEFYYSFKDRT 193
Query: 145 P-FVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
F + +G + LD + Q Y + + +
Sbjct: 194 DMFAIHPTSGVVVLTGRLDVLETQRYELEILAVDR 228
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 23/160 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + +G ++QV+ATD DS + Y+L+ N++ + +F++D T
Sbjct: 2289 YSTTLSEASVIGAPILQVRATDSDSEPNRGISYQLIGNHSKSHDHFHIDSHTGLISLVRA 2348
Query: 71 -------EHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
+H+ ++ +GG LSS V + VTD+ND P F+ YE + E G
Sbjct: 2349 LDYEQFQQHKLLVRAVDGGMPPLSSDVVVTVDVTDLNDNPPLFEQQVYEARISEHAAHGH 2408
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
V V A DAD + YS+ + FV+D TG I
Sbjct: 2409 FVMCVKACDADRSDLDRLEYSILSGNDHKSFVIDGETGII 2448
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 28/163 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA-----------TEHQ---- 73
+G ++QV A D+D G+ V Y + N + F +DP HQ
Sbjct: 1578 VGSVVLQVTALDRDKGRNAEVLYSIESGNI--GNSFTIDPILGSIKTARELDRSHQVDYD 1635
Query: 74 ----GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDA 128
+ E +S +V I VT ++ +P+F S Y + E + G VG V A
Sbjct: 1636 LMVKATDKGEPPMSEMTSVRISVTVADNASPKFTSKEYSAEISEAIRIGSFVGMVSA--- 1692
Query: 129 DEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
Q++V+Y +I F ++ ++G I T +ALD+E +Y
Sbjct: 1693 -HSQSSVMYEVKDGNIGDAFNINPHSGSIVTQRALDFETLPIY 1734
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 18/143 (12%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTAT-VNIRVTDINDK 98
D D G ++ + LD + S +NL ++ G S+ T V I+V D ND
Sbjct: 1404 DVDKGTGTIIVAKPLD--AEQKSSYNLT--------VEATDGTSTILTQVLIKVIDTNDH 1453
Query: 99 NPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP-----FVVDANT 152
P+F + YE SVPE + + ++ A D DE +N ++Y P F +D T
Sbjct: 1454 RPQFSTSKYEVSVPEDTEPETEILQISAVDRDE-KNKLIYTLQSSIDPASLKKFRLDPAT 1512
Query: 153 GDIRTNKALDYEKQQLYLERVFL 175
G + T++ LD+E ++ V +
Sbjct: 1513 GALYTSEKLDHEAIHQHVLTVMV 1535
Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G + V+I V DIND P F Y ++ E G + +V ATD+D N + Y
Sbjct: 2263 GAHAEVFVDIVVEDINDNPPVFVQQSYSTTLSEASVIGAPILQVRATDSDSEPNRGISYQ 2322
Query: 140 VPEDIP-----FVVDANTGDIRTNKALDYEKQQLY 169
+ + F +D++TG I +ALDYE+ Q +
Sbjct: 2323 LIGNHSKSHDHFHIDSHTGLISLVRALDYEQFQQH 2357
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 32/172 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ----------- 77
+G ++M V A D+D+G+ G + Y + D + F +D E G I+
Sbjct: 1050 MGSSVMTVSAHDEDTGRDGEIRYSIRDGS--GVGVFRID---EETGVIETSDRLDRESTS 1104
Query: 78 ---------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHA 125
D+G LSS V I V D+ND P+ Y + E ++V ++ A
Sbjct: 1105 HYWLTVYATDQGVVPLSSFIEVYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEA 1164
Query: 126 TDADEGQNAVVYYSVPEDIP---FVVDANTGDI-RTNKALDYEKQQLYLERV 173
D D + + Y + P F + TG I T++ LD E+Q ++ V
Sbjct: 1165 FDPDSSSSDKLTYRITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILEV 1216
>gi|395821589|ref|XP_003784120.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2 [Otolemur
garnettii]
Length = 2919
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 84/181 (46%), Gaps = 26/181 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS-YFNLDPAT---EHQG 74
Y R+ E+G ++ V+ATD D+ + YRLL+ + S F +DP + +G
Sbjct: 292 YKESLRENLEVGYEVLTVRATDGDAPLNANILYRLLEGIGGSPSEVFEIDPRSGVIRTRG 351
Query: 75 PI------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D G S+TA V + V D ND P+F Y V E
Sbjct: 352 PVDREEVESYQLTVEASDQGRDPGPRSATAAVFLSVEDDNDNAPQFSEKRYVVQVREDVT 411
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLER 172
G V RV A+D D+G NA+V+YS+ F +DA TG + LDYE + Y R
Sbjct: 412 PGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLR 471
Query: 173 V 173
V
Sbjct: 472 V 472
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LD 67
Y R+ G +++V A+D+D G LV Y ++ N Y + LD
Sbjct: 402 YVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 461
Query: 68 PATEHQGPIQ---DEGG---LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
T + ++ +GG LS+ + V ++V DIND P F S P++ +V E G
Sbjct: 462 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 521
Query: 120 VGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V A DAD G NA + Y V D PF ++ TG I LD E+ Y
Sbjct: 522 VLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFY 574
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------------AASYFNLDPATEHQ-- 73
+G +++ V A D+D+ ++ Y++ NT + LD E Q
Sbjct: 623 VGTSVVTVSAVDRDA--HSVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYV 680
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G TA + + VTD N P FQS Y +V E + G V + ATD D G
Sbjct: 681 LAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 740
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + IP F +DA+TG + T LDYE Q Y
Sbjct: 741 ENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSY 779
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 81/180 (45%), Gaps = 31/180 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPATE---- 71
Y + G + ++A D D G+ G +EY L D+ ++ +F+LDP T
Sbjct: 184 YQVTVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSN--HFFSLDPITGAVTT 241
Query: 72 -------------HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ +QD G S+ AT+ I VTD ND +P F+ Y+ S+ E +
Sbjct: 242 AEELDRETKNTHVFRVTVQDHGMPRRSALATLTIMVTDTNDHDPVFEQQEYKESLRENLE 301
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
G V V ATD D NA + Y + E I F +D +G IRT +D E+ + Y
Sbjct: 302 VGYEVLTVRATDGDAPLNANILYRLLEGIGGSPSEVFEIDPRSGVIRTRGPVDREEVESY 361
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLDPATEHQGPIQD- 78
+++Q+ ATD+DSG G V Y + + LD Q ++
Sbjct: 831 SVLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYILRAY 890
Query: 79 --EGGLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
+ G+ T V + V D+ND P F+ ++ V E GLAV RV ATD DEG
Sbjct: 891 AVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGT 950
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 951 NAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYEDRPEYV 991
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSSTA 86
G T++ + ATD+D+G+ + Y + D+ F +D A Q + E +S T
Sbjct: 726 GTTVVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTL 781
Query: 87 TVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
+ R V D+ND P+F Y+ SV E +V ++ ATD D
Sbjct: 782 AITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRD 841
Query: 130 EGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N V+Y+ D F+V++ +G +RT + LD E Y+ R + + K
Sbjct: 842 SGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYILRAYAVDK 894
Score = 42.7 bits (99), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 32/163 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G+ + +V ATD D G + Y++++ N F LD + + D
Sbjct: 934 IGLAVARVTATDPDEGTNAQIMYQIVEGNI--PEVFQLDIFSGELTALVDLDYEDRPEYV 991
Query: 79 ------EGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRV 123
L S ATV++R+ D ND P + F S P G A+GRV
Sbjct: 992 LVIQATSAPLVSRATVHVRLLDRNDNPPVLGNFEILFNNYVTNRSSSFPGG----AIGRV 1047
Query: 124 HATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
A D D + + ++ V ++A+TG++R ++ALD +
Sbjct: 1048 PAHDPDISDSLTYSFERGNELSLVLLNASTGELRLSRALDNNR 1090
Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 32/136 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASY-------------FN 65
LG ++ V+A D D+G +EYRL ++N T S F
Sbjct: 518 LGYLVLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFYSFG 577
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
++ A +H P L+++A+V++ + D+ND NP F Y + E G +V V
Sbjct: 578 VE-ARDHGTP-----ALTASASVSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVS 631
Query: 125 ATDADEGQNAVVYYSV 140
A D D ++V+ Y +
Sbjct: 632 AVDRDA--HSVITYQI 645
Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 73 QGPIQDEG-GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
Q P EG G T R ++N P+FQ Y+ +VPE Q G V + A D DE
Sbjct: 150 QAPELREGIGSPEEPTGGRRKRNVNTA-PQFQPPSYQVTVPENQPAGTPVASLRAIDPDE 208
Query: 131 GQNAVVYYSV------PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
G+ + Y++ + F +D TG + T + LD E + ++ RV
Sbjct: 209 GEAGRLEYTMDALFDSRSNHFFSLDPITGAVTTAEELDRETKNTHVFRV 257
>gi|301787381|ref|XP_002929106.1| PREDICTED: cadherin-12-like, partial [Ailuropoda melanoleuca]
Length = 433
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 70/145 (48%), Gaps = 24/145 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G ++QVKATD D +G R++ + YF++DP T
Sbjct: 264 YVASVPEMSPVGAYVLQVKATDADDPTYG-NSARVVYSILQGQPYFSIDPKTGVIRTALP 322
Query: 71 --------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
++Q IQ + GGL+ T VNI +TD+ND P F + VPE
Sbjct: 323 NMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPESSP 382
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV 140
G A+GR+ A D D GQNA + Y++
Sbjct: 383 IGSAIGRIRAVDPDFGQNAEIEYNI 407
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY SVPE G V +V ATDAD+ G +A V YS+ + P
Sbjct: 247 IKVQDINDNEPKFLDGPYVASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQP 306
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F +D TG IRT +D E ++ Y
Sbjct: 307 YFSIDPKTGVIRTALPNMDREVKEQY 332
>gi|242024858|ref|XP_002432843.1| Cadherin-23 precursor, putative [Pediculus humanus corporis]
gi|212518352|gb|EEB20105.1| Cadherin-23 precursor, putative [Pediculus humanus corporis]
Length = 2799
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 85/165 (51%), Gaps = 28/165 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRL-------LDNNTDAASYF------------NLDPATEHQ 73
++QV ATD+D+G + YR+ N D ++ NLD T ++
Sbjct: 439 ILQVAATDQDTGNNARITYRIKKIIGNGTTGNVDDETFGIFPNSGLIYLKENLDRETINK 498
Query: 74 GPI----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHAT 126
+ D G L++T + I VTD ND +P+FQ YEFS+ E VG++ A
Sbjct: 499 YDVLITATDNGTPPLTATCKILITVTDANDNDPKFQMDNYEFSIEENLPPNSPVGKISAV 558
Query: 127 DADEGQNAVVYYS-VP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
D D GQN+++ YS +P + F ++ TGDI ++LD EK+++Y
Sbjct: 559 DLDYGQNSLIKYSFIPSNNSSFKINPTTGDIYAKESLDREKKEIY 603
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 78/164 (47%), Gaps = 34/164 (20%)
Query: 35 QVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQGPIQ 77
++ A D D G+ L++Y + +N S F ++P T E +
Sbjct: 554 KISAVDLDYGQNSLIKYSFIPSNN---SSFKINPTTGDIYAKESLDREKKEIYELVAEAR 610
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYE--FSVPEGQ-DGLAVGRVHATDADEGQ 132
D+G SS V I VTD+ND PE P E SV E Q G V ++ A D D+G+
Sbjct: 611 DQGVPPRSSRVPVRIIVTDVNDNAPELLD-PREDVVSVREEQPGGTEVTKIKAIDKDKGK 669
Query: 133 NAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
N+ + YS+ + D+ F +D TG IRT LD+E++ +Y
Sbjct: 670 NSTITYSILKGRDSDGYDL-FTIDPITGSIRTRTTLDHEERSIY 712
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 77/176 (43%), Gaps = 31/176 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
+Y A + + G +MQV ATD D G V Y ++D N D A F ++P G ++
Sbjct: 1563 YYTASVWEGNNKGTYVMQVSATDLDEGSNAHVLYHIVDGNHDNA--FVIEPP--FSGLVK 1618
Query: 78 --------------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYE-FSVPEG 114
DEG L+ TAT+ + + D ND P F P+ SV EG
Sbjct: 1619 TNIVLDREIRDVYKLTIIATDEGNPQLTGTATLRVNIVDANDNQPTFP--PHGVISVSEG 1676
Query: 115 QD-GLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ G + V A D D + Y+ E F +D +G I K LDYE ++ Y
Sbjct: 1677 TEVGTVLTSVTANDVDTNP-TLTYFLTKETNEFSIDRFSGKIILGKKLDYENKKEY 1731
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 76/168 (45%), Gaps = 25/168 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----EHQGPI----------- 76
++ V ATD+DSGKFG V YR++ N D + F +D T ++G I
Sbjct: 118 IVAVVATDEDSGKFGDVRYRIVYGNDD--NVFRIDEKTGEIFLNNRGSILLLRERNKLNV 175
Query: 77 --QDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEG 131
D GL S A V I V+D N P F Y F + E + VGRV A
Sbjct: 176 SATDGDGLRSLQDAQVYITVSDSNRGPPVFDKSKYNFKILEDSKRNSIVGRVKAYQLSGS 235
Query: 132 QNAVVYY--SVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
+++ YY S + F +D TG I+T+ LD+E L V +S
Sbjct: 236 NDSIQYYIHSGDPEGNFSIDPETGIIQTSTILDHEIHSSILLNVQALS 283
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 68/159 (42%), Gaps = 24/159 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ +V A+D D G G + Y + N ++ P+ QD
Sbjct: 1154 IHKVVASDLDEGVNGEITYSITSGNIGNKFSIDIHSGLLSARPLDREVHSKYVLGITAQD 1213
Query: 79 EG---GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA---VGRVHATDADEGQ 132
G L + + I V D ND +P+F Y S+PE D L V VHA DAD G
Sbjct: 1214 RGNPTSLQGSCNITIVVDDENDNDPQFSQQKYTASIPE--DILPNSDVLTVHAVDADTGI 1271
Query: 133 NAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
N+ ++YS+ + F +D TG I T+ D EK +Y
Sbjct: 1272 NSKIFYSLANETHWLFKIDNKTGVISTSGFFDREKINVY 1310
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 12/93 (12%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV------ 140
VNI + D+ND PEF S SVPE + G + + HA D D G+N VV YS+
Sbjct: 295 VNIEIEDVNDNAPEFGSNNVRISVPEDIEPGTPLYQAHAIDKDSGENGVVRYSLLFGKKS 354
Query: 141 ----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+D F +D+ G + K LDYE Q +
Sbjct: 355 SSSTSKDF-FKMDSILGHLTLTKRLDYEMNQRH 386
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 73/174 (41%), Gaps = 28/174 (16%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLL----DNNTDAASYFNLDPATEHQGPIQ------ 77
E G L Q A DKDSG+ G+V Y LL +++ + +F +D H +
Sbjct: 323 EPGTPLYQAHAIDKDSGENGVVRYSLLFGKKSSSSTSKDFFKMDSILGHLTLTKRLDYEM 382
Query: 78 -----------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRV 123
D G LSS T+ I V D+ND P F+ Y +V E + +V
Sbjct: 383 NQRHSLVIVATDSGIPTLSSNMTLIIEVQDVNDNAPIFERSEYYVNVIESLPINSQILQV 442
Query: 124 HATDADEGQNAVVYYSVPEDIPFVVDANTGD----IRTNKALDYEKQQLYLERV 173
ATD D G NA + Y + + I N D I N L Y K+ L E +
Sbjct: 443 AATDQDTGNNARITYRIKKIIGNGTTGNVDDETFGIFPNSGLIYLKENLDRETI 496
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAV 135
+ +G L V I++ D ND P+F Y SV EG + G V +V ATD DEG NA
Sbjct: 1534 ETDGPLFGYCDVIIKLQDENDNAPKFTQEYYTASVWEGNNKGTYVMQVSATDLDEGSNAH 1593
Query: 136 VYYSVPE---DIPFVVDAN-TGDIRTNKALDYEKQQLY 169
V Y + + D FV++ +G ++TN LD E + +Y
Sbjct: 1594 VLYHIVDGNHDNAFVIEPPFSGLVKTNIVLDREIRDVY 1631
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 47/104 (45%), Gaps = 16/104 (15%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPY-EFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV 140
LS+ ATV I++ D ND P+F L Y EF G +V A DAD+G + YS+
Sbjct: 2070 LSNLATVKIKLKDENDNVPKFPVLEYFEFVAENEPVGTSVFTARAVDADKGIFGKLNYSI 2129
Query: 141 PEDIP---------------FVVDANTGDIRTNKALDYEKQQLY 169
F VD+NTG + TN DYE + Y
Sbjct: 2130 LSAATSTDSGSTDSEGSWKLFKVDSNTGVVSTNSVFDYENKNRY 2173
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 79/195 (40%), Gaps = 34/195 (17%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-------NNTDAASYFNLDPA 69
L Y + +G ++ +A D D G FG + Y +L +TD+ + L
Sbjct: 2093 LEYFEFVAENEPVGTSVFTARAVDADKGIFGKLNYSILSAATSTDSGSTDSEGSWKLFKV 2152
Query: 70 TEHQGPIQ--------------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEF 109
+ G + D G ++ V+I + ++ +P+F Y F
Sbjct: 2153 DSNTGVVSTNSVFDYENKNRYAFILHAVDVDGKTAKVRVHIEIESRDEFHPQFTDRTYRF 2212
Query: 110 SVPEG-QDGL-----AVGRVHATDADEGQNA-VVYYSVPEDIPFVVDANTGDIRTNKALD 162
++P DGL +G V ATD D+G + VVY + F ++ TG I K LD
Sbjct: 2213 TIPPPYSDGLLPVGTIIGNVEATDRDKGPDGKVVYQLTTQQTYFKINRTTGAIMVKKKLD 2272
Query: 163 YEKQQLYLERVFLIS 177
++ + F+++
Sbjct: 2273 DNVKESNRDISFIVT 2287
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNAVVYYSV---PED 143
V I +TD+ND P F S P+ P Q G ++ +V ATD DEG N+ + YS P +
Sbjct: 1331 VRITITDVNDNKPVFTSNPFFVQAPIYTQAGSSLIKVTATDDDEGTNSEIVYSFLNEPPN 1390
Query: 144 IPFVVDANTG 153
F ++ NTG
Sbjct: 1391 NKFKINPNTG 1400
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 28/158 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF--------------NLDPATEHQG 74
+G + V A D D G V Y L + + +F + + ++
Sbjct: 2 VGTSAAAVTANDSDCGVNAKVNYTLGEESGKLKEFFIKSDTGEICIANELDYEKIKSYEF 61
Query: 75 PI--QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD---------GLAVGRV 123
P+ D GGLS+TA V + VTD+ND P F Y S+ + + V
Sbjct: 62 PVIASDRGGLSTTAIVKVTVTDVNDHRPIFYPKEYNVSLSSNRKPTMMTSTSTTTPIVAV 121
Query: 124 HATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTN 158
ATD D G+ V Y + +D F +D TG+I N
Sbjct: 122 VATDEDSGKFGDVRYRIVYGNDDNVFRIDEKTGEIFLN 159
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 88 VNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE---D 143
+ + V D+ND PEF Q Y VPE D A+ +V A+D DEG N + YS+
Sbjct: 1121 LTVNVLDVNDHAPEFKQGSCYPIHVPENTDLSAIHKVVASDLDEGVNGEITYSITSGNIG 1180
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLYL 170
F +D ++G + + + LD E Y+
Sbjct: 1181 NKFSIDIHSG-LLSARPLDREVHSKYV 1206
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSVPEDIP-FV 147
IRVTD+ND P F Y+ + +G D + + V+ATD D G NA + YS+ + +
Sbjct: 1750 IRVTDVNDNAPSFSKPYYQVVLTDGPDHVTPLLTVNATDLDSGNNAKIKYSLYKPVKGIT 1809
Query: 148 VDANTGDIRTNK 159
+D + G ++ NK
Sbjct: 1810 IDGSKGILKANK 1821
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
SS T+ I + D+ND +P + P +PE + A DAD N+ + YS+
Sbjct: 803 SSAVTIRIEIVDVNDNSPVWPENPITIELPEDTPVSTVISNYSAFDADTSSNSDLRYSLL 862
Query: 142 EDIP------FVVDANTGDIRTNKALDYEKQQLY 169
P F VD TG I N LDYE+ Y
Sbjct: 863 RCYPESGTKVFAVDMLTGIITLNSPLDYEQLTEY 896
Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 53/127 (41%), Gaps = 21/127 (16%)
Query: 23 ARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT---------EH 72
R++ G + ++KA DKD GK + Y +L ++D F +DP T +H
Sbjct: 647 VREEQPGGTEVTKIKAIDKDKGKNSTITYSILKGRDSDGYDLFTIDPITGSIRTRTTLDH 706
Query: 73 Q-------GPIQDEGGLSSTATV---NIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVG 121
+ +GG T+ + V D+ D P F S F V E + G VG
Sbjct: 707 EERSIYRLAVAATDGGKPPKQTIRLLRVEVLDLTDHRPTFTSSSLVFKVKENVKIGYVVG 766
Query: 122 RVHATDA 128
V TD+
Sbjct: 767 TVAPTDS 773
>gi|350587824|ref|XP_003482493.1| PREDICTED: protocadherin Fat 4-like [Sus scrofa]
Length = 1741
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 82/172 (47%), Gaps = 26/172 (15%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GLV Y + N + A + +
Sbjct: 881 ATIPESHSIGAIVRTVSARDRDTAMNGLVRYSISSGNEEGIFAINSSTGILTLAKALDYE 940
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEF---SVPEGQDGLAV 120
+H+ I D G ++ T +V + V D+ND +P F LP E+ + G V
Sbjct: 941 LCQKHEMTISATDGGWVARTGYCSVTVNVIDVNDNSPVF--LPDEYFPTVLENAPSGTTV 998
Query: 121 GRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y+V D+ FV+D NTG I T LD+E +Q Y
Sbjct: 999 IHLNATDADSGTNAVIAYTVQSSDSDL-FVIDPNTGVITTQGFLDFETKQSY 1049
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 24/162 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V A DKDSG G ++Y +++ N + + F+++ AT I+
Sbjct: 472 ILTVSAVDKDSGPNGQLDYEIVNGNREHS--FSINHATGEIRSIRPLDREKTAQYVLTIK 529
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G S +A+V I + D ND P F + + VPE G V RV +D D G
Sbjct: 530 SSDKGSPSQSASVKVIINILDENDNAPRFSQI-FSAHVPENSPLGYTVTRVTTSDEDIGV 588
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA+ YS+ + +PF+++ +TGDI ++ L+ E Y RV
Sbjct: 589 NAISRYSIMDTSLPFIINPSTGDIVISRPLNREDTDRYRIRV 630
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 74/167 (44%), Gaps = 22/167 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y ++D + F ++P+T
Sbjct: 559 SQIFSAHVPENSPLGYTVTRVTTSDEDIGVNAISRYSIMDTSLP----FIINPSTGDIVI 614
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V I VTDIND P F Y PE + G
Sbjct: 615 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNAPRFSRPSYYLDCPELPEIGS 674
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
V +V ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 675 RVTQVSATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQVLKYQ 721
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 79/164 (48%), Gaps = 22/164 (13%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRLL----------DNNTDAASYFNLDPATEHQGPI 76
++G L++V A D KD G VEY +L DNNT S + + +Q +
Sbjct: 782 KVGTKLIKVTAVDDKDFGLNSEVEYFILNENHLGKFKLDNNTGWISVASSLISDLNQNFL 841
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D+G LSS ATV I VT+ N PEF ++PE G V V A D
Sbjct: 842 ITVTAKDKGNPPLSSQATVQIIVTEENYHTPEFSQSHMSATIPESHSIGAIVRTVSARDR 901
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
D N +V YS+ E+ F ++++TG + KALDYE Q +
Sbjct: 902 DTAMNGLVRYSISSGNEEGIFAINSSTGILTLAKALDYELCQKH 945
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 76/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 995 GTTVIHLNATDADSGTNAVIAYTVQSSDSD---LFVIDPNT---GVITTQGFLDFETKQS 1048
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S ATVNI++ N+ P F S Y F + E G VG V A+
Sbjct: 1049 YHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFAS 1108
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F ++ TG I + LD EK+ ERV L
Sbjct: 1109 DRDLGTDGEVHYLLFGNSRKKGFQINKKTGQIYVSGLLDREKE----ERVSL 1156
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LSS+ +V + VTD+ND P FQ PY +P G V V TDAD G N+ ++YS+
Sbjct: 231 LSSSTSVLVTVTDVNDNPPRFQHHPYVTHIPSPTPPGSFVFAVTVTDADVGPNSELHYSL 290
Score = 42.4 bits (98), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV- 140
S+ ++I V D+ND +P F+ P+ + E + V A D D G N + Y +
Sbjct: 434 FSAYEKLDITVLDVNDNSPVFKEDPFVSEILENLSPRKILTVSAVDKDSGPNGQLDYEIV 493
Query: 141 --PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ F ++ TG+IR+ + LD EK Y+
Sbjct: 494 NGNREHSFSINHATGEIRSIRPLDREKTAQYV 525
Score = 35.8 bits (81), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 24/160 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGP----------- 75
G + V TD D G + Y L N++ F++DP A GP
Sbjct: 267 GSFVFAVTVTDADVGPNSELHYSLSGRNSEK---FHIDPLRGAIMAAGPLNGASEVTFSV 323
Query: 76 -IQDEGGLSSTATVNIRVTDINDKN-PEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
++D G T + + V +N + P+ ++ F PE Q G V + T +
Sbjct: 324 HVKDSGSFPKTDSTTVTVRFVNKADFPKVRAKEQTFMFPENQPVGTLVTTI--TGSSLRG 381
Query: 133 NAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYL 170
+ YY ++ F +D TG + ++ALD+EK Q Y+
Sbjct: 382 EPLSYYIASGNLGNTFQIDQLTGQVSISQALDFEKIQKYV 421
>gi|149021384|gb|EDL78847.1| rCG59113 [Rattus norvegicus]
Length = 4589
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 80/156 (51%), Gaps = 24/156 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPATEHQGPIQ---- 77
L ++QVKATD+DSG +G + Y L+++ D F L+ + + P +
Sbjct: 2508 LHTLVVQVKATDRDSGIYGHLTYHLVNDFAKDRFYVNDGGQVFTLE-RLDREAPAEKVIS 2566
Query: 78 ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADE 130
D GG + TVN+ +TD ND P+F+S YE +V G +V +V A+DADE
Sbjct: 2567 VRLMAKDAGGKVAFCTVNVILTDDNDNAPQFRSTKYEVNVGSSAAKGTSVVKVFASDADE 2626
Query: 131 GQNAVVYYSVPEDIPFV-----VDANTGDIRTNKAL 161
G NA V Y++ D V ++ TG I T ++L
Sbjct: 2627 GSNADVTYAIEADSESVEENLEINQLTGLITTKESL 2662
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 75/160 (46%), Gaps = 23/160 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQV ATD D + Y L + A F L+P T E Q
Sbjct: 3040 GKLVMQVSATDADIRSNAEITYTLFGS---GAEKFKLNPDTGELRTLALLDREEQAVYHL 3096
Query: 78 -----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D GG S AT+ + + D+ND PEF + PY +V E + G + RV ATDAD G
Sbjct: 3097 LVKATDGGGRSCQATIVLTLEDVNDNTPEFTADPYAITVFENTEPGTPLTRVQATDADAG 3156
Query: 132 QNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
N + YS+ + D F ++ +G ++ K LD E Q +Y
Sbjct: 3157 LNRKISYSLLDSADGQFSINEQSGILQLEKHLDRELQAVY 3196
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 85/181 (46%), Gaps = 39/181 (21%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL---------------------DN 56
++ ++ DK E+ ++QV+ATDKD G G V Y +L D
Sbjct: 828 YFVEVSEDK-EINSEIIQVEATDKDLGPSGHVTYAILTDTEKFAIDRVTGVVKIIQPLDR 886
Query: 57 NTDAASYFNL---DPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
Y + D ATE E LSST + + + D+ND P F +P +SV
Sbjct: 887 EVQRVHYLKIEARDQATE-------EPWLSSTVLLKVSLDDVNDNPPRF--IPPSYSVKV 937
Query: 114 GQD---GLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQL 168
+D G + + A D D GQ++ V YS+ + + F VD +G +R + LD+EK+QL
Sbjct: 938 REDLPEGTIIMWLEAHDPDVGQSSQVRYSLLDHGEGHFDVDKLSGAVRIVQQLDFEKKQL 997
Query: 169 Y 169
Y
Sbjct: 998 Y 998
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 74/167 (44%), Gaps = 21/167 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--------TDAASYF---NLD 67
YGA + +G ++QV A +D + Y ++ N + + F NLD
Sbjct: 3236 YGATVSEDIVIGTEVLQVYAASRDIEANAEITYAIISGNEHGKFSIDSKTGAIFIIENLD 3295
Query: 68 PATEHQGPIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAV 120
+ H + E GG LS ATVNI +TDIND +P F Y V E V
Sbjct: 3296 YESSHGYYLTVEATDGGTPSLSDVATVNINITDINDNSPVFSQDSYTTVVSEDAALEQPV 3355
Query: 121 GRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYE 164
+ A DAD N+ + YS+ E PF +D G+I+ K LD E
Sbjct: 3356 ITIMADDADGPSNSHILYSIIEGNQGSPFTIDPVRGEIKVTKPLDRE 3402
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 96 NDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP--EDIPFVVDANT 152
N PEF Y+ S E G V RV A D DEG+N V YS+ +PFV+D T
Sbjct: 458 NSNPPEFTQTSYKASFDENAPVGTPVMRVSAVDPDEGENGYVTYSIANLNHVPFVIDHFT 517
Query: 153 GDIRTNKALDYEKQQLYLERVFLISKFATSY 183
G + T++ LDYE + RV+++ A+ +
Sbjct: 518 GAVSTSENLDYE----LMPRVYMLRIRASDW 544
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 82/186 (44%), Gaps = 35/186 (18%)
Query: 11 EMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT 70
E T+D Y + E G L +V+ATD D+G + Y LLD+ A F+++
Sbjct: 3125 EFTADP--YAITVFENTEPGTPLTRVQATDADAGLNRKISYSLLDS---ADGQFSIN--- 3176
Query: 71 EHQGPIQ--------------------DEG---GLSSTATVNIRVTDINDKNPEFQSLPY 107
E G +Q D+G L++T TV + V DIND P F+ Y
Sbjct: 3177 EQSGILQLEKHLDRELQAVYTLTLKAADQGLPRKLTATGTVVVSVLDINDNPPVFEYREY 3236
Query: 108 EFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDY 163
+V E G V +V+A D NA + Y++ E F +D+ TG I + LDY
Sbjct: 3237 GATVSEDIVIGTEVLQVYAASRDIEANAEITYAIISGNEHGKFSIDSKTGAIFIIENLDY 3296
Query: 164 EKQQLY 169
E Y
Sbjct: 3297 ESSHGY 3302
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVY 137
+G SS A V ++V D ND +P + Y ++PE G V +V ATDAD NA +
Sbjct: 3001 DGTFSSKARVEVKVLDANDNSPVCERTAYSDAIPEDALPGKLVMQVSATDADIRSNAEIT 3060
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ F ++ +TG++RT LD E+Q +Y
Sbjct: 3061 YTLFGSGAEKFKLNPDTGELRTLALLDREEQAVY 3094
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 74/162 (45%), Gaps = 28/162 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASY--FNLDPATE-------------HQGPI- 76
++Q+ A D+D K L+ L ++ D AS F LDPAT HQ +
Sbjct: 1476 ILQISAVDRDE-KNKLI--YTLQSSIDPASLKKFRLDPATGALYTSEKLDHEAIHQHVLT 1532
Query: 77 -----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
QD + A + + V+D+ND +P F S YE V E G V +V A D D+
Sbjct: 1533 VMVRDQDVPVKRNFARIIVNVSDMNDHSPWFTSSSYEGRVYESAAVGSVVLQVTALDRDK 1592
Query: 131 GQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
G+NA V YS+ F +D G I+T + LD Q Y
Sbjct: 1593 GRNAEVLYSIESGNIGNSFTIDPILGSIKTARELDRSHQVDY 1634
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 88 VNIRVTDINDKNPEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE---- 142
V+I+V D ND +P +S PYE F V G V +V A+D D G N V YS+ +
Sbjct: 2796 VSIQVKDANDNSPVLESNPYEAFIVENLPAGSRVIQVRASDLDSGVNGQVMYSLDQSQDA 2855
Query: 143 DI--PFVVDANTGDIRTNKALDYEKQQLYLERV 173
DI F ++ TG I T K LD+E++ Y +V
Sbjct: 2856 DIIESFAINMETGWITTLKELDHEERASYQIKV 2888
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 79/185 (42%), Gaps = 38/185 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA------------------ 60
Y A + G ++QV+A+D DSG G V Y L D + DA
Sbjct: 2815 YEAFIVENLPAGSRVIQVRASDLDSGVNGQVMYSL-DQSQDADIIESFAINMETGWITTL 2873
Query: 61 --------ASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
ASY A++H +Q LSSTA V++ VTD+ND P F + Y+ +V
Sbjct: 2874 KELDHEERASYQIKVVASDHGEKVQ----LSSTAIVDVTVTDVNDSPPRFTAEIYKGTVS 2929
Query: 113 EGQ-DGLAVGRVHATDAD--EGQNAVVYYSVPEDI--PFVVDANTGDIR--TNKALDYEK 165
E G + + TDAD E V Y+ D F V+ D R K LD E+
Sbjct: 2930 EDDPPGGVIAILSTTDADSEEINRQVSYFITGGDALGQFAVENMQNDWRVYVKKPLDREQ 2989
Query: 166 QQLYL 170
+ YL
Sbjct: 2990 KDSYL 2994
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 27/181 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EH 72
SL G ++ +G +++ + ATD DSG G + Y + N D S F +D T +
Sbjct: 720 SLPTGIEVKEDLPVGASILFMNATDLDSGFNGKLVYAISGGNDD--SCFTVDMETGMLKV 777
Query: 73 QGPIQDEGGLSSTATVNIRVTDI------------------NDKNPEFQSLPYEFSVPEG 114
P+ E ++ T+NI V D+ ND PEF Y V E
Sbjct: 778 LSPLDRE--VTDKYTLNITVYDLGIPQRAAWRLLDVTVLDANDNAPEFLQESYFVEVSED 835
Query: 115 QD-GLAVGRVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYLER 172
++ + +V ATD D G + V Y++ D F +D TG ++ + LD E Q+++ +
Sbjct: 836 KEINSEIIQVEATDKDLGPSGHVTYAILTDTEKFAIDRVTGVVKIIQPLDREVQRVHYLK 895
Query: 173 V 173
+
Sbjct: 896 I 896
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 81/178 (45%), Gaps = 34/178 (19%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-- 70
TS+ ++Y + + + V+++Q++A D DS + YR+ N +F++ P T
Sbjct: 1140 TSEPVYYPEIMENSPK-DVSVVQIEAFDPDSSSSDKLTYRITSGNPQG--FFSIHPKTGL 1196
Query: 71 --------------EH--QGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH + + D G S+ A V +++ D ND P+F Y+ +P
Sbjct: 1197 ITTTSRKLDREQQDEHILEVTVTDNGVPPRSTIARVIVKILDENDNRPQFLQKFYKIRLP 1256
Query: 113 EGQ--DG------LAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNK 159
E + DG + RV A D DEG NA + YS+ E F ++ TG + + K
Sbjct: 1257 EREKADGDRSAKREPLYRVIAADKDEGPNAELSYSIEEGNEHGRFSIEPKTGVVSSKK 1314
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 28/175 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
+L Y A+ + E+G + V A D+DSG+ G V Y L +++ +F + P+
Sbjct: 2084 NLPYYAVVKVDAEVGHVIRHVTAIDRDSGRNGDVHYYLKEHH----DHFEIGPSGDISLK 2139
Query: 71 ---EHQG---------PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
EH +D G + +A V + +T +N P F+ Y +PE Q
Sbjct: 2140 KQFEHDTLNKEYLVTVVAKDGGNPAFSAEVLVPITVMNKAMPVFEKAFYSAEIPENVQTH 2199
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
V V A ++ EG V+YS+ + P F ++ NTG I LD+E Y
Sbjct: 2200 SPVVHVQA-NSPEGLK--VFYSITDGDPFSQFTINFNTGVINVIAPLDFESHPAY 2251
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 11/101 (10%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR--------VHATDADEG 131
GLS+ TV + + D ND P F Y + E +V + ATDAD
Sbjct: 1744 AGLSTNTTVVVHIQDENDNPPAFTRAEYSGFISESASVNSVVLTDKNVPLVIRATDADRE 1803
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
NA++ Y + E F +D TG I T +LDYE+ +++
Sbjct: 1804 SNALLVYQIVEPSVHNYFAIDPTTGAIHTVLSLDYEETRVF 1844
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI 144
A V ++V D ND P F Y S+PE ++ RV ATDAD G N YYS +
Sbjct: 134 AKVRVQVLDTNDLRPLFSPTSYSVSLPENTAIRTSIARVSATDADIGTNGEFYYSFKDRT 193
Query: 145 P-FVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
F + +G + LD + Q Y + + +
Sbjct: 194 DMFAIHPTSGVVVLTGRLDVLETQRYELEILAVDR 228
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 23/160 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + +G ++QV+ATD DS + Y+L+ N++ + +F++D T
Sbjct: 2289 YSTTLSEASVIGAPILQVRATDSDSEPNRGISYQLIGNHSKSHDHFHIDSHTGLISLVRA 2348
Query: 71 -------EHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
+H+ ++ +GG LSS V + VTD+ND P F+ YE + E G
Sbjct: 2349 LDYEQFQQHKLLVRAVDGGMPPLSSDVVVTVDVTDLNDNPPLFEQQVYEARISEHAAHGH 2408
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
V V A DAD + YS+ + FV+D TG I
Sbjct: 2409 FVMCVKACDADRSDLDRLEYSILSGNDHKSFVIDGETGII 2448
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 28/163 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA-----------TEHQ---- 73
+G ++QV A D+D G+ V Y + N + F +DP HQ
Sbjct: 1578 VGSVVLQVTALDRDKGRNAEVLYSIESGNI--GNSFTIDPILGSIKTARELDRSHQVDYD 1635
Query: 74 ----GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDA 128
+ E +S +V I VT ++ +P+F S Y + E + G VG V A
Sbjct: 1636 LMVKATDKGEPPMSEMTSVRISVTVADNASPKFTSKEYSAEISEAIRIGSFVGMVSA--- 1692
Query: 129 DEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
Q++V+Y +I F ++ ++G I T +ALD+E +Y
Sbjct: 1693 -HSQSSVMYEVKDGNIGDAFNINPHSGSIVTQRALDFETLPIY 1734
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 18/143 (12%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTAT-VNIRVTDINDK 98
D D G ++ + LD + S +NL ++ G S+ T V I+V D ND
Sbjct: 1404 DVDKGTGTIIVAKPLD--AEQKSSYNLT--------VEATDGTSTILTQVLIKVIDTNDH 1453
Query: 99 NPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP-----FVVDANT 152
P+F + YE SVPE + + ++ A D DE +N ++Y P F +D T
Sbjct: 1454 RPQFSTSKYEVSVPEDTEPETEILQISAVDRDE-KNKLIYTLQSSIDPASLKKFRLDPAT 1512
Query: 153 GDIRTNKALDYEKQQLYLERVFL 175
G + T++ LD+E ++ V +
Sbjct: 1513 GALYTSEKLDHEAIHQHVLTVMV 1535
Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G + V+I V DIND P F Y ++ E G + +V ATD+D N + Y
Sbjct: 2263 GAHAEVFVDIVVEDINDNPPVFVQQSYSTTLSEASVIGAPILQVRATDSDSEPNRGISYQ 2322
Query: 140 VPEDIP-----FVVDANTGDIRTNKALDYEKQQLY 169
+ + F +D++TG I +ALDYE+ Q +
Sbjct: 2323 LIGNHSKSHDHFHIDSHTGLISLVRALDYEQFQQH 2357
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 32/172 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ----------- 77
+G ++M V A D+D+G+ G + Y + D + F +D E G I+
Sbjct: 1050 MGSSVMTVSAHDEDTGRDGEIRYSIRDGS--GVGVFRID---EETGVIETSDRLDRESTS 1104
Query: 78 ---------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHA 125
D+G LSS V I V D+ND P+ Y + E ++V ++ A
Sbjct: 1105 HYWLTVYATDQGVVPLSSFIEVYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEA 1164
Query: 126 TDADEGQNAVVYYSVPEDIP---FVVDANTGDI-RTNKALDYEKQQLYLERV 173
D D + + Y + P F + TG I T++ LD E+Q ++ V
Sbjct: 1165 FDPDSSSSDKLTYRITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILEV 1216
>gi|410909492|ref|XP_003968224.1| PREDICTED: cadherin-18-like [Takifugu rubripes]
Length = 808
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 80/172 (46%), Gaps = 31/172 (18%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EH 72
E+G +++QV A+D D +G R++ + YF++DP T EH
Sbjct: 174 EVGTSVLQVTASDADDPTYG-NSARIVYSILQGQPYFSVDPKTGIIRTALADMDREAREH 232
Query: 73 QGPIQDE-------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
+ GGLS + T+NI +TDIND P+F Y+ VPE Q G VG++
Sbjct: 233 YTVVIQAKDMAGQVGGLSGSTTINITLTDINDNPPKFPQKNYQLYVPESAQVGKPVGKIK 292
Query: 125 ATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D G NA + YS+ I D G I K L+YE+++ Y
Sbjct: 293 ANDDDLGINADIKYSIINSEGANTFSISADRDTKEGIISLKKPLNYERKKSY 344
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 55/97 (56%), Gaps = 6/97 (6%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNA 134
E L + I+V DIND P+F P+ +VPE + G +V +V A+DAD+ G +A
Sbjct: 137 EEALEPKSEFIIKVQDINDNAPKFPDGPFVATVPEMSEVGTSVLQVTASDADDPTYGNSA 196
Query: 135 VVYYSVPEDIP-FVVDANTGDIRTNKA-LDYEKQQLY 169
+ YS+ + P F VD TG IRT A +D E ++ Y
Sbjct: 197 RIVYSILQGQPYFSVDPKTGIIRTALADMDREAREHY 233
>gi|395541765|ref|XP_003772809.1| PREDICTED: protocadherin Fat 4 [Sarcophilus harrisii]
Length = 5148
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 82/172 (47%), Gaps = 26/172 (15%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------- 70
A + +G + V A D+D+ GL+ Y + N + N T
Sbjct: 3264 ATVPESQSVGSIVRTVSARDRDAAMNGLITYHISSGNENGLFAINASTGTLTLAKPLDYE 3323
Query: 71 ---EHQGPIQ-DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFS---VPEGQDGLAV 120
+H+ I +GG +S ++ I V D+ND +P F +P E+S + G V
Sbjct: 3324 LHQKHEMTISATDGGWRARTSYCSIIINVLDVNDNSPIF--IPEEYSPTVLENAPSGTTV 3381
Query: 121 GRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
R++ATDAD G NAV+ YS+ D+ FV+D N+G I T LDYE +Q Y
Sbjct: 3382 MRLNATDADSGSNAVIAYSLQSSDSDL-FVIDPNSGVITTQGFLDYETKQSY 3432
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 76/161 (47%), Gaps = 23/161 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F++DP + E +
Sbjct: 1922 GSRIMQLTAMDADEGANALVTYAIISGADDS---FHIDPESGELIATKRLDRERRSKYSL 1978
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G SS +NI ++D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1979 LVRADDGLQSSDMRINITISDVNDHIPKFSRPVYSFDIPEDTTPGSLVAAILATDDDSGV 2038
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYL 170
N + Y+V ED F ++ TG ++LDYE +Q Y+
Sbjct: 2039 NGEITYTVNEDDEDGIFFLNPVTGVFNLTRSLDYETRQYYI 2079
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 24/163 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ-------------- 77
T++ V A DKDSG G +EY +++ NT+ + F++ +T I+
Sbjct: 2854 TILTVSAIDKDSGPNGQLEYNIVNGNTENS--FSIHHSTGEIRSIRSLDREKVSQYVLTV 2911
Query: 78 ---DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D+G S+T TV I V D ND P F + + VPE G V RV +D D G
Sbjct: 2912 RCSDKGTPPQSTTVTVIINVLDENDNAPRFSQI-FTAPVPENAPLGYTVTRVTTSDEDIG 2970
Query: 132 QNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NAV YS+ + +PF ++ +TGDI ++ L+ E Y RV
Sbjct: 2971 VNAVSRYSITDTSLPFTINPSTGDIIISRPLNREDTDRYRIRV 3013
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 61/113 (53%), Gaps = 6/113 (5%)
Query: 59 DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDG 117
+A +Y+ L E +G + G L VN+ V DIND P F S Y+ VPE G
Sbjct: 379 EATAYYQLLVEVEDKGEPKRRGYLQ----VNVTVQDINDNPPVFGSSHYQAGVPEDAAVG 434
Query: 118 LAVGRVHATDADEGQNAVVYYSVPED-IPFVVDANTGDIRTNKALDYEKQQLY 169
+V +V A DADEG NA + Y + ED PF +D TG I + LDYE ++ Y
Sbjct: 435 SSVLQVSAADADEGTNADIRYQLQEDGGPFHMDPETGLITVREPLDYEARRQY 487
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +ATD+DSG +EY LL+ + S +D G + D
Sbjct: 2235 VFKAQATDRDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATD 2294
Query: 79 EGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ V + + DIND NP F Y+ + E G + +V+A D DEG N
Sbjct: 2295 KGQPPLSSSTEVAVIILDINDNNPVFAKALYKVEINENTLTGTDIVQVYAADGDEGTNGQ 2354
Query: 136 VYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V YS+ E+ F +D+ TG + K LD EK+ +Y
Sbjct: 2355 VRYSLLSGNENQEFRIDSVTGILSVAKPLDREKKAMY 2391
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 22/167 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y + TD + F ++P+T
Sbjct: 2942 SQIFTAPVPENAPLGYTVTRVTTSDEDIGVNAVSRYSI----TDTSLPFTINPSTGDIII 2997
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V I VTD+ND P F+ Y PE + G
Sbjct: 2998 SRPLNREDTDRYRIRVSAHDSGWTVSTDVAIFVTDVNDNAPRFKKPSYYLDCPELTEIGA 3057
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYE 164
V +V ATD DEG N V+Y + F ++A TG+I +AL Y
Sbjct: 3058 KVAQVSATDPDEGSNGQVFYFIKSQSEFFRINATTGEIFNKQALRYR 3104
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 80/175 (45%), Gaps = 25/175 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY A + +++V A+D D G GL+ Y ++ N + F +D AT
Sbjct: 1380 FYQATISELAANLTQVLRVSASDVDEGSNGLIHYSVVKGNEE--KMFAIDSATGQVILAG 1437
Query: 71 --EHQGP------IQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
+H+ IQ D G L+ST T++I + D ND P F V E + G
Sbjct: 1438 QLDHEATASYSLLIQAVDSGTVSLNSTCTLSIDILDENDNTPSFPKSTLFVDVLENMRIG 1497
Query: 118 LAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD+D G NA ++YS+ F + NTG I K LD+E Q LY
Sbjct: 1498 ELVTSVTATDSDSGDNADIHYSITGTNNHGTFSISPNTGGIFLAKKLDFETQPLY 1552
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 75/164 (45%), Gaps = 32/164 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T+M++ ATD DSG ++ Y L +++D F +DP + G I +G L
Sbjct: 3378 GTTVMRLNATDADSGSNAVIAYSLQSSDSD---LFVIDP---NSGVITTQGFLDYETKQS 3431
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHAT 126
S ATVNI++ N+ P F S Y F V E G VG V A+
Sbjct: 3432 YHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEVSEAASKGTVVGEVFAS 3491
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQ 167
D D G + V+Y + F +++ TG I + LD EK++
Sbjct: 3492 DRDMGVDGEVHYLIFGTSRKKGFQINSRTGQIYVSGFLDREKEE 3535
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 75/159 (47%), Gaps = 24/159 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI----Q 77
T++QV A D D G + Y L+ N D A + LD T+ + +
Sbjct: 2444 TILQVVARDDDQGSNSKLTYTLIGGNEDNAFILSASGELKVRQKLDRETKEKCILLITAT 2503
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSV----PEGQDGLAVGRVHATDADEG 131
D G L+ T TVN+ V+D+ND P F Y ++ P G D L V A+DAD
Sbjct: 2504 DSGSPALTGTGTVNVIVSDVNDNVPTFAHKTYSATISEDAPTGSDVLLVS---ASDADAS 2560
Query: 132 QNAVVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
NAV+ Y + + F ++ +TG I T+ LD E ++ Y
Sbjct: 2561 TNAVISYRLIGGNSQFTINPSTGQIITSALLDRETKENY 2599
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 75/170 (44%), Gaps = 22/170 (12%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------ 68
D L Y + + +V+A+D+DSG G + Y + + NT A F + P
Sbjct: 1163 DQLSYEVTLSEAQPVNSLFFKVQASDQDSGANGEIAYSIAEGNTGNA--FGIFPDGQLYV 1220
Query: 69 ATEHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+E +QD LS+T V + + D+ND P F S Y F E Q
Sbjct: 1221 KSELDRELQDRYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYVFYFEEEQR 1280
Query: 117 GLA-VGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
G + VG ++A D D G N V YS P F ++A +G+I + D E
Sbjct: 1281 GGSFVGMINAIDKDFGPNGEVRYSFETMQPDFELNAISGEITSTHQFDRE 1330
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 73/166 (43%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI---------- 76
+G L++V A D KD G +EY + +N F LD T
Sbjct: 3165 RVGTKLLKVTAIDDKDFGLNSEIEYFI--SNETPVEKFKLDSTTGWVSVASSLISDLNQN 3222
Query: 77 -------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
+D+G LSS ATV I VT+ N +PEF +VPE Q G V V A
Sbjct: 3223 FLMTVIARDKGNPPLSSQATVQIVVTEENYHSPEFSQSHISATVPESQSVGSIVRTVSAR 3282
Query: 127 DADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
D D N ++ Y + E+ F ++A+TG + K LDYE Q +
Sbjct: 3283 DRDAAMNGLITYHISSGNENGLFAINASTGTLTLAKPLDYELHQKH 3328
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 13/117 (11%)
Query: 60 AASYFNLDPATEHQG---PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
A+ F+ QG P++D+ ATV + + DIND P+F Y+ ++ E
Sbjct: 1337 GAAVFSFTVTASDQGLPKPLKDQ------ATVQVYMKDINDNAPKFLKDFYQATISELAA 1390
Query: 117 GLA-VGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
L V RV A+D DEG N +++YSV E+ F +D+ TG + LD+E Y
Sbjct: 1391 NLTQVLRVSASDVDEGSNGLIHYSVVKGNEEKMFAIDSATGQVILAGQLDHEATASY 1447
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 27/162 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQG 74
G ++QV A D D G G V Y LL N + F +D T +
Sbjct: 2336 GTDIVQVYAADGDEGTNGQVRYSLLSGNENQE--FRIDSVTGILSVAKPLDREKKAMYSL 2393
Query: 75 PIQDEGGLSS----TATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDA 128
+Q SS T V+I + DIND P F+ PY ++PE + L + +V A D
Sbjct: 2394 TVQSADRGSSPRMDTTKVDIILLDINDFVPVFELSPYSINIPENLEALPKTILQVVARDD 2453
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQ 167
D+G N+ + Y++ ED F++ A +G+++ + LD E ++
Sbjct: 2454 DQGSNSKLTYTLIGGNEDNAFILSA-SGELKVRQKLDRETKE 2494
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 23/166 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI----QDEGGL--- 82
G L+ ++A+D D G G V + + +T+ S F LDP + I ++E
Sbjct: 765 GTDLLVIEASDGDLGDNGTVRFSFQEADTEQRS-FRLDPVSGRLSTISSLDREEQAFYSL 823
Query: 83 ------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
+S VN+ + D+ND +P F + Y + E + G + V A+D D
Sbjct: 824 LVLAVDLGSPPQTSLTRVNVSLLDVNDNSPVFYPVQYFAHIQENEPAGSYITTVSASDPD 883
Query: 130 EGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
G N V YS+ + F + ++TG I T LD E++ Y +V
Sbjct: 884 SGPNGTVKYSISAGDTSRFQIHSHTGVISTKMVLDREEKTAYQLQV 929
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 73/174 (41%), Gaps = 38/174 (21%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQG 74
+ + G ++ Q KA D D G G+V Y L N + F +D P H G
Sbjct: 1070 ENWQAGHSIFQAKALDPDEGINGMVLYSLKQN---PKNLFTIDEKNGNISLLRPLDVHAG 1126
Query: 75 PIQ------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV-GRVHA 125
Q D G LSS+ + + V D+ND P F L YE ++ E Q ++ +V A
Sbjct: 1127 SYQVEILASDRGVPQLSSSFILTVSVHDVNDNPPVFDQLSYEVTLSEAQPVNSLFFKVQA 1186
Query: 126 TDADEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYL 170
+D D G N + YS+ E NTG+ + LD E Q Y+
Sbjct: 1187 SDQDSGANGEIAYSIAE-------GNTGNAFGIFPDGQLYVKSELDRELQDRYV 1233
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDE 79
G+++ +L + V T G F + + + AS + + + +Q +
Sbjct: 979 GSVSASTMDLNTNITYVITTGDQKGVFAINQ---VTGQLTTASIIDREEQSFYQLKVVAS 1035
Query: 80 GGLSSTAT-VNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVY 137
GG+ + T VNI V D+ND P F Q++ + V Q G ++ + A D DEG N +V
Sbjct: 1036 GGMVTGETIVNITVKDLNDNAPHFLQAVEWVNVVENWQAGHSIFQAKALDPDEGINGMVL 1095
Query: 138 YSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
YS+ P+++ F +D G+I + LD +E
Sbjct: 1096 YSLKQNPKNL-FTIDEKNGNISLLRPLDVHAGSYQVE 1131
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 20/159 (12%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY-------FNLDPATEHQ--------G 74
G + + ATD DSG G + Y + +++ D + FNL + +++
Sbjct: 2023 GSLVAAILATDDDSGVNGEITYTVNEDDEDGIFFLNPVTGVFNLTRSLDYETRQYYILTA 2082
Query: 75 PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
+D GG T + + D+ND P F S Y S+ E G + + TDAD+G N
Sbjct: 2083 RAEDGGGQFMTIRIYFNILDVNDNPPVFSSTSYSTSLMENLPLGSTILIFNVTDADDGLN 2142
Query: 134 AVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ + YS+ F VD N G ++ + LD E Q Y
Sbjct: 2143 SQLSYSITSGDSLGQFTVDKN-GILKIRQTLDRESQSFY 2180
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1890 AEVEITLQDINDNPPVFPTDTLDLTVEENIGDGSRIMQLTAMDADEGANALVTYAIISGA 1949
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +G++ K LD E++ Y
Sbjct: 1950 DDSFHIDPESGELIATKRLDRERRSKY 1976
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 77/186 (41%), Gaps = 41/186 (22%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI 76
L Y ++ G + V ATD DSG + Y ++ N +F++ ++H G +
Sbjct: 644 LVYRVNLSEEAPPGSYVSGVSATDGDSGLNANLRYSIISGN--ELDWFHI---SDHSGLV 698
Query: 77 QD--EGGL----SSTATVNIR------------------VTDINDKNPEF-QSLPYEFSV 111
GGL +S +NI V D+ND+ P F Q YE SV
Sbjct: 699 TTAAAGGLDRERASQVVLNISARDQGVHPKVSYAQLIVTVLDVNDEKPVFSQEAGYEVSV 758
Query: 112 ----PEGQDGLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDY 163
P G D L + A+D D G N V +S E F +D +G + T +LD
Sbjct: 759 AENAPAGTDLLV---IEASDGDLGDNGTVRFSFQEADTEQRSFRLDPVSGRLSTISSLDR 815
Query: 164 EKQQLY 169
E+Q Y
Sbjct: 816 EEQAFY 821
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
SS + I V D+ND +P F+ P+ + E + V A D D G N + Y++
Sbjct: 2817 FSSYEKLAIAVLDVNDNSPVFKDDPFVAEILENLSPRTILTVSAIDKDSGPNGQLEYNIV 2876
Query: 142 E---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ F + +TG+IR+ ++LD EK Y+ V
Sbjct: 2877 NGNTENSFSIHHSTGEIRSIRSLDREKVSQYVLTV 2911
Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 65/143 (45%), Gaps = 25/143 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP--- 75
Y A + G ++ V A+D D+ ++ YRL+ N S F ++P+T
Sbjct: 2535 YSATISEDAPTGSDVLLVSASDADASTNAVISYRLIGGN----SQFTINPSTGQIITSAL 2590
Query: 76 -------------IQDEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DG 117
+ +GG LSS+ +V++ VTD+ND P FQ PY +P G
Sbjct: 2591 LDRETKENYTLIVVSSDGGFPEPLSSSTSVSVTVTDVNDNPPRFQHHPYVTHIPSPTPSG 2650
Query: 118 LAVGRVHATDADEGQNAVVYYSV 140
V V TD D G N+ ++YS+
Sbjct: 2651 SFVFSVTVTDPDTGPNSELHYSL 2673
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 69/174 (39%), Gaps = 20/174 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V A+D DSG G V+Y + +T ++ LD
Sbjct: 860 YFAHIQENEPAGSYITTVSASDPDSGPNGTVKYSISAGDTSRFQIHSHTGVISTKMVLDR 919
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V I V D D P F Y F V E G VG
Sbjct: 920 EEKTAYQLQVVATDGGHLQSPNQAIVTITVLDTQDNPPVFSQAVYSFVVFENVALGYHVG 979
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A+ D N + Y D F ++ TG + T +D E+Q Y +V
Sbjct: 980 SVSASTMDLNTN-ITYVITTGDQKGVFAINQVTGQLTTASIIDREEQSFYQLKV 1032
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 69/167 (41%), Gaps = 28/167 (16%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPI 76
+G + V ATD DSG + Y + N F++ P T E Q P+
Sbjct: 1495 RIGELVTSVTATDSDSGDNADIHYSITGTNNHGT--FSISPNTGGIFLAKKLDFETQ-PL 1551
Query: 77 -------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
+D+G SST +V I V D ND P F S+ E G +V V A
Sbjct: 1552 YKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPTFPPGDIFKSITENLPIGSSVISVTAR 1611
Query: 127 DADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D D N + Y++ + +P F +D G I TN +D E L+
Sbjct: 1612 DPDADINGQLTYAIIQQMPRGNHFGIDEVKGTIYTNAEIDREFANLF 1658
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNAVVYYSV 140
SS A++ I V DIND P F L Y ++ E G V V ATD D G NA + YS+
Sbjct: 622 SSVASLVIFVNDINDHPPVFSQLVYRVNLSEEAPPGSYVSGVSATDGDSGLNANLRYSI 680
Score = 39.7 bits (91), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 71/173 (41%), Gaps = 25/173 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNN----------TDAASYFNLDP 68
LG T++ TD D G + Y + +D N ++ S++NL
Sbjct: 2125 LGSTILIFNVTDADDGLNSQLSYSITSGDSLGQFTVDKNGILKIRQTLDRESQSFYNLVI 2184
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
H P+ +STA V+I + D+ND P F S P VPE V + ATD
Sbjct: 2185 QV-HDMPLSSTSSYTSTAQVSIILLDVNDNAPTFIS-PKLTYVPENTPTDTVVFKAQATD 2242
Query: 128 ADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
D G N+ + Y++ P F + G++R LD E+ Y V K
Sbjct: 2243 RDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATDK 2295
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N V Y + +
Sbjct: 1681 VTILVTDLNDNVPMFISQNALAADPSVMIGSILTTIVAADPDEGANGEVEYEIINGDTET 1740
Query: 146 FVVDANTGDIRTNKAL 161
F+VD +GD+R + AL
Sbjct: 1741 FMVDRYSGDLRVSSAL 1756
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 72/175 (41%), Gaps = 28/175 (16%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDN--------------NTDAASYFNLDPAT--- 70
E+G + QV ATD D G G V Y + N A Y N+ ++
Sbjct: 3054 EIGAKVAQVSATDPDEGSNGQVFYFIKSQSEFFRINATTGEIFNKQALRYRNVTGSSNVN 3113
Query: 71 --EHQGPI--QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRV 123
H + D G L S TV I + D ND P+F + Y V + + G + +V
Sbjct: 3114 INRHSFIVTSSDRGSPSLLSETTVTINIVDSNDNAPQFLNSKYFTPVTKNVRVGTKLLKV 3173
Query: 124 HAT-DADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERVF 174
A D D G N+ + Y + + P F +D+ TG + +L + Q +L V
Sbjct: 3174 TAIDDKDFGLNSEIEYFISNETPVEKFKLDSTTGWVSVASSLISDLNQNFLMTVI 3228
>gi|170064482|ref|XP_001867543.1| neural-cadherin [Culex quinquefasciatus]
gi|167881873|gb|EDS45256.1| neural-cadherin [Culex quinquefasciatus]
Length = 3396
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 83/186 (44%), Gaps = 35/186 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL----DNNTDAASYFNLDPATEHQG 74
+ A R+ +G +++ ++ATD+D GK G +EY + DN T + NL G
Sbjct: 443 FHANVREGTSVGSSVITIRATDQDIGKNGEIEYSIASVSGDNVTVGENADNLFRIEARTG 502
Query: 75 PIQDEGGL-------------------------SSTATVNIRVTDINDKNPEFQSLPYEF 109
I G L S+TATV + V D ND P+F Y
Sbjct: 503 TITTRGALDREISEMYVIQVMATDMAIPQSERKSTTATVFVNVLDDNDNYPQFSERTYTV 562
Query: 110 SVPEGQ---DGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDY 163
V E Q + + ++ ATDAD+G NA V Y++ F +D+ +GD+ K LDY
Sbjct: 563 HVSEDQWTNENNVIAQIRATDADKGNNAAVRYAIIGGNTQSQFSMDSISGDVLLVKPLDY 622
Query: 164 EKQQLY 169
E + Y
Sbjct: 623 ESIRSY 628
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 71/144 (49%), Gaps = 22/144 (15%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------- 68
L+ +A D +G +++Q+ ATD D G G V++ L + + S F +DP
Sbjct: 984 LYQATIAEDAF-IGTSVLQISATDDDMGLNGRVKFMLSSKDVEDGS-FVIDPSSGVIRTN 1041
Query: 69 --------ATEHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD- 116
A H I + G LSS+ V IR+ DIND P F S VPE
Sbjct: 1042 KGLDRESIAVYHLIAIAADRGTPTLSSSVEVQIRLNDINDSPPTFASDKLTMYVPENSPV 1101
Query: 117 GLAVGRVHATDADEGQNAVVYYSV 140
G A+G ++A D DEG NA+V+YS+
Sbjct: 1102 GSAIGEIYAHDPDEGVNAIVHYSI 1125
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 25/167 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQGPIQ 77
+ Q++ATD D G V Y ++ NT S F++D + ++ I+
Sbjct: 576 IAQIRATDADKGNNAAVRYAIIGGNTQ--SQFSMDSISGDVLLVKPLDYESIRSYRLVIR 633
Query: 78 DEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
+ G S+T + + V D ND P F + ++ +V E G + RV A D+DEG
Sbjct: 634 AQDGGSPSRSNTTQLLVNVQDANDNAPRFYTTQFQEAVLESVPVGYNIVRVQAYDSDEGV 693
Query: 133 NAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
N+ + Y + E+ P +D+ TG I T LD E++ Y+ +V I
Sbjct: 694 NSEISYRIQDRDENSPLAIDSRTGWIHTTSPLDREEKSRYVFQVVAI 740
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 84/180 (46%), Gaps = 31/180 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--QGPI 76
Y A + +G T++ V A+D D G + Y L + +++ + +P + H G I
Sbjct: 875 YTASVFEDAPVGTTVLMVFASDNDVGLNAQITYSLNEGSSNGLG--SNEPFSVHVQTGAI 932
Query: 77 --------------------QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
+D G L+ T V I +TDIND +P+F Y+ ++ E
Sbjct: 933 VTTAALDRETTSTFLLTVTAKDSGNPSLADTTDVEISITDINDNSPQFDVPLYQATIAED 992
Query: 115 Q-DGLAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G +V ++ ATD D G N V + + ED FV+D ++G IRTNK LD E +Y
Sbjct: 993 AFIGTSVLQISATDDDMGLNGRVKFMLSSKDVEDGSFVIDPSSGVIRTNKGLDRESIAVY 1052
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 76/187 (40%), Gaps = 30/187 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
Y A+++ G + V+A D + LLD+ + + N T I
Sbjct: 337 LYVVSAQEEQPAGTEITTVRARDPEHSVVSYTMVSLLDSRSQSMFQINTKSGTVKTVAIL 396
Query: 78 DEGGL-----------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
D + S T+T+ + V D ND P F+S + +V EG G +
Sbjct: 397 DREVMDVHYFRIIATDDSFPPRSGTSTLQVNVLDCNDHTPAFESEEFHANVREGTSVGSS 456
Query: 120 VGRVHATDADEGQNAVVYYSVPE------------DIPFVVDANTGDIRTNKALDYEKQQ 167
V + ATD D G+N + YS+ D F ++A TG I T ALD E +
Sbjct: 457 VITIRATDQDIGKNGEIEYSIASVSGDNVTVGENADNLFRIEARTGTITTRGALDREISE 516
Query: 168 LYLERVF 174
+Y+ +V
Sbjct: 517 MYVIQVM 523
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 50/102 (49%), Gaps = 9/102 (8%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D G S A VNI +TD N+ P F++ PY SV E G V V A+D D G NA +
Sbjct: 846 DSGQRSDQAIVNINITDANNFAPVFENAPYTASVFEDAPVGTTVLMVFASDNDVGLNAQI 905
Query: 137 YYSVPE--------DIPFVVDANTGDIRTNKALDYEKQQLYL 170
YS+ E + PF V TG I T ALD E +L
Sbjct: 906 TYSLNEGSSNGLGSNEPFSVHVQTGAIVTTAALDRETTSTFL 947
Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 29/166 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQDE------ 79
+G +++V+A D D G + YR+ D D S +D T P+ E
Sbjct: 677 VGYNIVRVQAYDSDEGVNSEISYRIQDR--DENSPLAIDSRTGWIHTTSPLDREEKSRYV 734
Query: 80 -------GGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDA 128
GG+ S++ +V + + DIND +P F YE S+ E Q G V V ATD
Sbjct: 735 FQVVAIDGGIPPKSASTSVVVTIQDINDNDPIFNPKYYEASIAEDQPPGTPVTTVTATDL 794
Query: 129 DEGQNAVVYYSVPEDIP---FVVDANTGD--IRTNKALDYEKQQLY 169
DE ++ ++Y + F + + G I ++LDY+++Q +
Sbjct: 795 DE--DSRLHYEITSGNTRGRFSITSQNGRGLITIAQSLDYKQEQRF 838
>gi|355691685|gb|EHH26870.1| hypothetical protein EGK_16946 [Macaca mulatta]
Length = 801
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 20/172 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY + +G +++V ATD D+G G + Y L + + + F +D T
Sbjct: 247 FYRVQISEDSPIGFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDSLTGEIELKK 306
Query: 71 ----------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
E +D GG S T+ I+V D+ND PE + +PE V
Sbjct: 307 QLDFEKLQSYEVNIEARDAGGFSGKCTILIQVMDVNDHAPEVTMSAFTSPIPENAPETVV 366
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
+D D G+N + + ED+PF++ ++ G+ + T K LD E + Y
Sbjct: 367 ALFSVSDLDSGENGKINCFIQEDLPFLLKSSVGNFYTLLTEKPLDRESRAEY 418
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
S TA V I V D+ND PEF+ Y + E G V +V ATD D G N + YS+
Sbjct: 224 SGTAQVYIEVVDVNDNAPEFEQPFYRVQISEDSPIGFLVVKVSATDVDTGVNGEISYSLF 283
Query: 141 --PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
++I F VD+ TG+I K LD+EK Q Y
Sbjct: 284 QASDEISKTFKVDSLTGEIELKKQLDFEKLQSY 316
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L++ + + V+D+ND P F + Y V E L +G V ATD D NA V YS+
Sbjct: 432 LTTHLNMTVLVSDVNDNVPAFTQISYTLFVRENNSPALHIGSVSATDRDSSTNAQVTYSL 491
Query: 141 --PED--IPF----VVDANTGDIRTNKALDYEKQQLYLERV 173
P+D +P +A+ G + ++LDYE Q + RV
Sbjct: 492 LPPQDQHLPLSSLVSTNADNGHLFALRSLDYEALQEFEFRV 532
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 74/187 (39%), Gaps = 35/187 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL-------------DNNTDAASYFN 65
Y R+ + + + V ATD+DS V Y LL N D F
Sbjct: 457 YTLFVRENNSPALHIGSVSATDRDSSTNAQVTYSLLPPQDQHLPLSSLVSTNADNGHLFA 516
Query: 66 LDPAT-------EHQGPIQDEG--GLSSTATVNIRVTDINDKNP------EFQSLPYEFS 110
L E + D G LSS A V + V D ND +P + S P
Sbjct: 517 LRSLDYEALQEFEFRVRAADRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTEL 576
Query: 111 VPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL---DY 163
VP + G V +V A D D GQNA + Y + E F V A+ G++RT + L D
Sbjct: 577 VPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDA 636
Query: 164 EKQQLYL 170
K +L +
Sbjct: 637 AKHRLVV 643
>gi|344277382|ref|XP_003410481.1| PREDICTED: protocadherin Fat 4 [Loxodonta africana]
Length = 4980
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 80/170 (47%), Gaps = 22/170 (12%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL+ Y + N A + +
Sbjct: 3096 ATIPESHSIGAIVRTVSARDRDAAMNGLIRYGISSGNEGGVFAINSSTGVLILAKALDYE 3155
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
+H+ I D G ++ T TV + V D+ND +P F Y +V E G V
Sbjct: 3156 QCQKHEMTISATDGGWVARTGYCTVTVNVIDVNDNSPVFTPDEYFPTVLENAPSGTTVIH 3215
Query: 123 VHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y+V D+ FV+D NTG I T LD+E +Q Y
Sbjct: 3216 LNATDADSGTNAVIAYTVQSSDSDL-FVIDPNTGIITTQGFLDFETKQSY 3264
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F +DP + E +
Sbjct: 1756 GSKIMQLTALDADEGANALVTYAIISGADDS---FRIDPESGDLIATKRLDRERRSKYSL 1812
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G SS +NI ++D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1813 LVRADDGLQSSDMRINITISDVNDHTPKFSRPVYSFDIPEDTTPGSLVAAILATDDDSGV 1872
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG + LDYE QQ Y+ V
Sbjct: 1873 NGEITYIVNEDDEDGIFFLNPVTGVFNLTRVLDYEAQQYYILTV 1916
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 24/162 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V A DKDSG G ++Y +++ N + + F+++ AT I+
Sbjct: 2687 ILTVSAMDKDSGPNGQLDYEIVNGNQENS--FSINHATGEIRSIRPLDREKVSQYILTIK 2744
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G S + +V I + D ND P F + + VPE G V RV +D D G
Sbjct: 2745 SSDKGSPSQSTSVKVIINILDENDNAPRFSQI-FSAHVPENSPLGYTVTRVTTSDEDVGV 2803
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA+ YS+ + +PF ++ +TGDI ++ L+ E LY RV
Sbjct: 2804 NAISRYSIMDTSLPFTINPSTGDIVISRPLNREDTDLYRIRV 2845
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 22/168 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y ++D + F ++P+T
Sbjct: 2774 SQIFSAHVPENSPLGYTVTRVTTSDEDVGVNAISRYSIMDTSLP----FTINPSTGDIVI 2829
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V I VTD+ND P F Y PE + G
Sbjct: 2830 SRPLNREDTDLYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPELTEIGS 2889
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
V +V ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 2890 KVTQVSATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQVLKYQN 2937
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 72/163 (44%), Gaps = 33/163 (20%)
Query: 38 ATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGGLSSTAT--- 87
ATD D G G+ YR++ N A F LD G + +GGL AT
Sbjct: 159 ATDSDIGSNGVDHRSYRIIRGN--EAGRFRLDITLNPSGEGAFLHLVSKGGLDREATPQY 216
Query: 88 -------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
VN+ V DIND P F S Y+ VPE G +V +V A D
Sbjct: 217 QLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPIFGSSHYQAGVPEDAAVGSSVLQVAAAD 276
Query: 128 ADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ADEG NA + Y + E PF +D TG I + LD+E ++ Y
Sbjct: 277 ADEGTNADIRYRLQDEGTPFQMDPETGLITVREPLDFEARRQY 319
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 75/173 (43%), Gaps = 21/173 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN------TDAASY-------- 63
FY A + +++V A+D D G GL+ Y ++ N D+ S
Sbjct: 1214 FYQATISESAANLTQVLRVSASDVDEGSNGLIHYSVIKGNEERQFAIDSTSGQVTLIGKL 1273
Query: 64 -FNLDPATEHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
+ PA D G L+ST T+NI + D ND P F V E + G
Sbjct: 1274 DYEATPAYSLVIQAVDSGTVSLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGEL 1333
Query: 120 VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD+D G NA ++YS+ F + NTG I K LD+E Q LY
Sbjct: 1334 VSSVTATDSDSGDNADLHYSISGTNNHGTFSISPNTGSIFLAKKLDFETQSLY 1386
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 74/158 (46%), Gaps = 18/158 (11%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPIQ- 77
L T++QV A D D G + Y L N D A + LD T+ +
Sbjct: 2275 LPSTILQVLARDDDQGSNSQISYVLFGGNEDNAFTLSASGELRVTQSLDRETKEHFVLTV 2334
Query: 78 ---DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEG 131
D G L+ T T+NI V D+ND P F S Y ++PE G V V+A+DAD
Sbjct: 2335 TATDSGSPALTGTGTINIIVDDVNDNVPTFASKRYFTTIPEDAPTGTDVLLVNASDADAS 2394
Query: 132 QNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
NAV+ + + F ++ +TG I T+ LD E ++ Y
Sbjct: 2395 TNAVIRI-IGGNSQFTINPSTGQIITSALLDREAKENY 2431
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 71/161 (44%), Gaps = 20/161 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +ATD DSG +EY LL+ + S +D G + D
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREDVSNYTLMVVATD 2128
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y+ + E G + +V+A D DEG N
Sbjct: 2129 KGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVYAADGDEGTNGQ 2188
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V Y + + F +D+ TG I K LD EK Y V
Sbjct: 2189 VRYGIVGGNVNQEFRIDSVTGTITVAKPLDREKTPTYFLTV 2229
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 75/162 (46%), Gaps = 23/162 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI----QDEGGL--- 82
G L+ + ATD+D G G V + L + T S F LDP + I ++E
Sbjct: 599 GTELLVLGATDRDLGDNGTVRFSLQEAETVQKS-FRLDPVSGRLSTISSLDREEQAFYSL 657
Query: 83 ------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
SS A +N+ + D+ND +P F + Y + E + G + + V ATD D
Sbjct: 658 LVLATDLGSPPQSSMARINVSLLDMNDNSPVFYPVQYFAHIQENEPGGSYITTVSATDPD 717
Query: 130 EGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V YS+ + F V+A +G I T ALD E++ Y
Sbjct: 718 LGPNGTVKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAY 759
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 71/168 (42%), Gaps = 18/168 (10%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF---NLDPAT 70
D L Y + + +V+A+DKDSG G V Y + + N DA F L +
Sbjct: 997 DQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEVAYSIAEGNAGDAFGVFPDGQLYIKS 1056
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E +QD LS+T V + + D+ND P F S Y F E Q G
Sbjct: 1057 ELDRELQDRYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAG 1116
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
VG+V+A D D G N V YS P F + A +G I D E
Sbjct: 1117 SFVGKVNAVDKDFGPNGEVRYSFERVQPDFELHAVSGKITNTHQFDRE 1164
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L ATV++ + DIND P+F Y+ ++ E L V RV A+D DEG N +++YSV
Sbjct: 1190 LKDQATVHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGSNGLIHYSV 1249
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E+ F +D+ +G + LDYE Y
Sbjct: 1250 IKGNEERQFAIDSTSGQVTLIGKLDYEATPAY 1281
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 76/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3210 GTTVIHLNATDADSGTNAVIAYTVQSSDSD---LFVIDPNT---GIITTQGFLDFETKQS 3263
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S ATVNI++ N+ P F S Y F + E G VG V A+
Sbjct: 3264 YHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFAS 3323
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F ++ TG I + LD E++ ERV L
Sbjct: 3324 DRDLGTDGEVHYLIFGSSRKKGFQINKKTGQIYVSGPLDRERE----ERVSL 3371
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 27/168 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGPI--- 76
G ++QV A D D G G V Y ++ N + F +D P + P
Sbjct: 2170 GTDIIQVYAADGDEGTNGQVRYGIVGGNVNQE--FRIDSVTGTITVAKPLDREKTPTYFL 2227
Query: 77 ----QDEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDA 128
D G + T+TV+I + DIND P F+ PY +VPE L + +V A D
Sbjct: 2228 TVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPENLGTLPSTILQVLARDD 2287
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
D+G N+ + Y + ED F + A +G++R ++LD E ++ ++ V
Sbjct: 2288 DQGSNSQISYVLFGGNEDNAFTLSA-SGELRVTQSLDRETKEHFVLTV 2334
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 75/167 (44%), Gaps = 32/167 (19%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI---------- 76
++G L++V A D KD G VEY + +N + F L+ H G I
Sbjct: 2997 KVGTKLIKVAAVDDKDFGLNSEVEYFI--SNGNHLGKFKLE---NHTGWISVASPLISDL 3051
Query: 77 ----------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRV 123
+D+G LSS ATV I VT+ N PEF ++PE G V V
Sbjct: 3052 NQNFLITVTAKDKGNPPLSSQATVQIIVTEENYHTPEFSQSHMSATIPESHSIGAIVRTV 3111
Query: 124 HATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQ 167
A D D N ++ Y + E F ++++TG + KALDYE+ Q
Sbjct: 3112 SARDRDAAMNGLIRYGISSGNEGGVFAINSSTGVLILAKALDYEQCQ 3158
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1724 AEVEITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTALDADEGANALVTYAIISGA 1783
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ K LD E++ Y
Sbjct: 1784 DDSFRIDPESGDLIATKRLDRERRSKY 1810
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 57/134 (42%), Gaps = 16/134 (11%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPATEHQGPIQ 77
+ + G ++ Q KA D D G G+V Y L N N + L H G Q
Sbjct: 904 ENWQAGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINEKNGNISLLGSLDVHAGSYQ 963
Query: 78 DE--------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
E LSS+ + + V D+ND P F L YE ++ E + +V A+D
Sbjct: 964 IEILASDMGVPQLSSSFILTVCVHDVNDNPPVFDQLSYEVTLSESEPVNSRFFKVQASDK 1023
Query: 129 DEGQNAVVYYSVPE 142
D G N V YS+ E
Sbjct: 1024 DSGANGEVAYSIAE 1037
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LSS+ +V + VTD+ND P FQ PY +P G V V TDAD G N+ +YYS+
Sbjct: 2446 LSSSTSVLVTVTDVNDNPPRFQHHPYVTHIPSPTPPGSFVFAVTVTDADIGANSELYYSL 2505
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
G ++ VNI V D+ND +P F Q++ V Q G ++ + A D DEG N +V Y
Sbjct: 871 GTVTGDTVVNITVKDLNDNSPHFLQAVESVNVVENWQAGHSIFQAKAVDPDEGVNGMVLY 930
Query: 139 SV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
S+ P+++ F ++ G+I +LD +E
Sbjct: 931 SLKQNPKNL-FAINEKNGNISLLGSLDVHAGSYQIE 965
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV- 140
SS ++I V D+ND +P F+ P+ + E + V A D D G N + Y +
Sbjct: 2649 FSSYEKLDITVLDVNDNSPIFKEDPFVSEILENLSPQKILTVSAMDKDSGPNGQLDYEIV 2708
Query: 141 --PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
++ F ++ TG+IR+ + LD EK Y+
Sbjct: 2709 NGNQENSFSINHATGEIRSIRPLDREKVSQYI 2740
Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N V Y + +
Sbjct: 1515 VTILVTDLNDNVPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEVEYEIINGDTDT 1574
Query: 146 FVVDANTGDIRTNKAL 161
F+VD +GD+R AL
Sbjct: 1575 FIVDRYSGDLRVASAL 1590
Score = 39.3 bits (90), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 69/173 (39%), Gaps = 25/173 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNN----------TDAASYFNLDP 68
LG T++ TD D G + Y + +D N ++ S++NL
Sbjct: 1959 LGSTVLVFNVTDADDGINSQLAYSIASGDSLGQFTVDQNGVLKVLKALDRESQSFYNL-V 2017
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
H P +STA V+I + D+ND P F S P +PE V + ATD
Sbjct: 2018 VQVHDLPQLPASRYTSTAQVSIILLDVNDNPPTFLS-PKLTYIPENTPIDTVVFKAQATD 2076
Query: 128 ADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
D G N+ + Y++ P F + G++R LD E Y V K
Sbjct: 2077 PDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREDVSNYTLMVVATDK 2129
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 67/174 (38%), Gaps = 20/174 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G V+Y + + ++ LD
Sbjct: 694 YFAHIQENEPGGSYITTVSATDPDLGPNGTVKYSISAGDRSRFQVNAQSGVISTRMALDR 753
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V I V D D P F Y F V E G VG
Sbjct: 754 EEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAYSFVVFENVALGYHVG 813
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A+ D N + Y D F ++ TG + T +D E+Q Y +V
Sbjct: 814 SVSASTMDLNSN-ISYLITTGDQKGMFAINQVTGQLTTASVVDREEQSFYQLKV 866
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV 140
SS A++ I V DIND P F Y ++ E G V V ATD D G NA + YS+
Sbjct: 456 SSVASLVIFVNDINDHPPVFTQQVYRVNLSEEAPPGSYVSGVSATDGDSGLNANLRYSI 514
Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 66/166 (39%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG + Y + N F++ P T E Q
Sbjct: 1329 RIGELVSSVTATDSDSGDNADLHYSISGTNNHGT--FSISPNTGSIFLAKKLDFETQSLY 1386
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G SST +V I V D ND P F S+ E G +V V A D
Sbjct: 1387 KLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENVPIGTSVISVTAHD 1446
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + Y++ + +P F +D G I T +D E L+
Sbjct: 1447 PDADINGKLSYAIIQQMPRGNHFGIDEVKGTIYTTAEIDREFANLF 1492
>gi|119631153|gb|EAX10748.1| cadherin 9, type 2 (T1-cadherin), isoform CRA_c [Homo sapiens]
Length = 394
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 36/195 (18%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + +G +++QV ATD D +G V Y +L YF++DP +
Sbjct: 163 LYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQ----GQPYFSVDPESGIIK 218
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
++Q IQ + GGLS T TVNI +TD+N+ P F Y+F+ P
Sbjct: 219 TALPDMSRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNNNPPRFPQSTYQFNSP 278
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPED-----IPFVVDANTGD-IRTNKALDYEK 165
E G +GR+ A D D G+NA + YS+ E + D +T + I T K + +
Sbjct: 279 ESVPLGTHLGRIKANDPDVGENAEMEYSIAEGDGADMFDVITDKDTQEGIITVKQVSFHC 338
Query: 166 QQLYLERVFLISKFA 180
L++E + F+
Sbjct: 339 LHLFIECFIIYVCFS 353
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 147 IKIHDINDNEPKFTKDLYTASVPEMSGVGTSVIQVTATDADDANYGNSAKVVYSILQGQP 206
Query: 146 -FVVDANTGDIRT 157
F VD +G I+T
Sbjct: 207 YFSVDPESGIIKT 219
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H TD D+G + Y + FV+D NTGDI K LD E++ LY+
Sbjct: 68 GTDTQYVGKLH-TDQDKGDGNLKYILTGDGAGSLFVIDENTGDIHAAKKLDREEKSLYIL 126
Query: 172 RVFLISK 178
R I +
Sbjct: 127 RAKAIDR 133
>gi|302564845|ref|NP_001180833.1| protocadherin beta-8 precursor [Macaca mulatta]
Length = 801
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 20/172 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY + +G +++V ATD D+G G + Y L + + + F +D T
Sbjct: 247 FYRVQISEDSPIGFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDSLTGEIELKK 306
Query: 71 ----------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
E +D GG S T+ I+V D+ND PE + +PE V
Sbjct: 307 QLDFEKLQSYEVNIEARDAGGFSGKCTILIQVMDVNDHAPEVTMSAFTSPIPENAPETVV 366
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
+D D G+N + + ED+PF++ ++ G+ + T K LD E + Y
Sbjct: 367 ALFSVSDLDSGENGKINCFIQEDLPFLLKSSVGNFYTLLTEKPLDRESRAEY 418
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
S TA V I V D+ND PEF+ Y + E G V +V ATD D G N + YS+
Sbjct: 224 SGTAQVYIEVVDVNDNAPEFEQPFYRVQISEDSPIGFLVVKVSATDVDTGVNGEISYSLF 283
Query: 141 --PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
++I F VD+ TG+I K LD+EK Q Y
Sbjct: 284 QASDEISKTFKVDSLTGEIELKKQLDFEKLQSY 316
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L++ + + V+D+ND P F + Y V E L +G V ATD D NA V YS+
Sbjct: 432 LTTHLNMTVLVSDVNDNVPAFTQISYTLFVRENNSPALHIGSVSATDRDSSTNAQVTYSL 491
Query: 141 --PED--IPF----VVDANTGDIRTNKALDYEKQQLYLERV 173
P+D +P ++A+ G + ++LDYE Q + RV
Sbjct: 492 LPPQDQHLPLSSLVSINADNGHLFALRSLDYEALQEFEFRV 532
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 78/187 (41%), Gaps = 35/187 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL---DNNTDAASYFNLDPATEHQGP 75
Y R+ + + + V ATD+DS V Y LL D + +S +++ H
Sbjct: 457 YTLFVRENNSPALHIGSVSATDRDSSTNAQVTYSLLPPQDQHLPLSSLVSINADNGHLFA 516
Query: 76 IQ-----------------DEG--GLSSTATVNIRVTDINDKNP------EFQSLPYEFS 110
++ D G LSS A V + V D ND +P + S P
Sbjct: 517 LRSLDYEALQEFEFRVRAADRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTEL 576
Query: 111 VPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL---DY 163
VP + G V +V A D D GQNA + Y + E F V A+ G++RT + L D
Sbjct: 577 VPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDA 636
Query: 164 EKQQLYL 170
K +L +
Sbjct: 637 AKHRLVV 643
>gi|348543507|ref|XP_003459225.1| PREDICTED: cadherin-6-like [Oreochromis niloticus]
Length = 787
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 33/183 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A ++ ++G ++ QV ATD D +G +L+ + + YF+++P T
Sbjct: 162 YTASVPERSDIGTSVTQVTATDADDRMYG-NSAKLVYSISQGHPYFSVEPNTGVIRTALG 220
Query: 71 ---------EHQGPIQD-------EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
EH + + GGL+ + V I +TD+ND P F Y+F VPE
Sbjct: 221 PGDMDREQREHYQVVIEAKDMGGQRGGLTGSTVVKITLTDVNDNPPRFTQSIYQFRVPES 280
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQ 166
+ G VGR+ ATD D G+N+ + +++ DI + G I K LDYEK+
Sbjct: 281 SKSGSIVGRIQATDKDIGKNSEMDFTIISGDGMEMFDISTDKETQEGLITVRKPLDYEKK 340
Query: 167 QLY 169
Y
Sbjct: 341 PSY 343
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 52/88 (59%), Gaps = 8/88 (9%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y SVPE D G +V +V ATDAD+ G +A + YS+ + P
Sbjct: 145 IKLHDINDNEPKFSKEVYTASVPERSDIGTSVTQVTATDADDRMYGNSAKLVYSISQGHP 204
Query: 146 -FVVDANTGDIRTNKA---LDYEKQQLY 169
F V+ NTG IRT +D E+++ Y
Sbjct: 205 YFSVEPNTGVIRTALGPGDMDREQREHY 232
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 51/126 (40%), Gaps = 31/126 (24%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------------------- 68
+G + V A D D + +V Y + D TD FN+ P
Sbjct: 397 VGTVVGSVSAMDPDRAR-SIVNYSI-DRRTDRGHLFNVYPMNGSVFLLKSLDRETTAWHN 454
Query: 69 ----ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVH 124
ATE P Q SS+ +V IR+ DIND P F ++ F + + G + V
Sbjct: 455 ISIVATELNNPRQ-----SSSVSVYIRLLDINDNAPMFATVYETFVCEKTKVGQRIQIVS 509
Query: 125 ATDADE 130
A DADE
Sbjct: 510 AVDADE 515
Score = 36.2 bits (82), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D +G++ + D D G +V Y E FV+D N GD+ + LD E++ Y+
Sbjct: 66 GSDYQYIGKLQS-DQDHGDGSVKYVLSGEGAGTIFVIDENNGDLHATRRLDREEKAFYIL 124
Query: 172 RVFLISKFATSYL 184
+ +++K+ L
Sbjct: 125 KATVVNKWTGQKL 137
>gi|354473666|ref|XP_003499054.1| PREDICTED: cadherin-8-like isoform 3 [Cricetulus griseus]
Length = 711
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 86/185 (46%), Gaps = 31/185 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + LG ++ V ATD D +G +L+ + + YF+++P T
Sbjct: 172 YHATVPEMSILGTSVTNVTATDADDPVYG-NSAKLVYSILEGQPYFSIEPETAIIKTALP 230
Query: 71 --------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
E+ IQ + GGLS T T+ + +TD+ND P+F Y FSVPE
Sbjct: 231 NMDREAKEEYLVVIQAKDMGGHSGGLSGTTTLPVTLTDVNDNPPKFAQSLYHFSVPEDVV 290
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQL 168
G A+GRV A D D G+NA Y + + +I A G IR K LD+E ++
Sbjct: 291 LGTAIGRVKANDQDIGENAQSSYDIIDGDGTALFEITSDAQAQDGVIRLRKPLDFETKKS 350
Query: 169 YLERV 173
Y +V
Sbjct: 351 YTLKV 355
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND PEF + PY +VPE G +V V ATDAD+ G +A + YS+ E P
Sbjct: 155 IKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEGQP 214
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLYL 170
F ++ T I+T +D E ++ YL
Sbjct: 215 YFSIEPETAIIKTALPNMDREAKEEYL 241
Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNA--VVYYSVP 141
S V I+V D+ND PEF + F G+ G + V A D D+ +N +Y +P
Sbjct: 478 SRVPVAIKVLDVNDNAPEFAAEYEAFLCENGKPGQVIQTVSAMDKDDPKNGHYFLYSLLP 537
Query: 142 EDI---PFVVDANTGD----IRTNKALDYEKQQLYL 170
E + F + N + + + + +KQ++YL
Sbjct: 538 EMVNNPNFTIKKNEDNSLSILAKHNGFNRQKQEVYL 573
>gi|345784074|ref|XP_856760.2| PREDICTED: protocadherin Fat 4 isoform 2 [Canis lupus familiaris]
Length = 4980
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F +DP + E +
Sbjct: 1756 GSKIMQLTAMDADEGANALVTYTIISGADDS---FRIDPESGDLIATKRLDRERRSKYSL 1812
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G SS +NI V+D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1813 LVRADDGLQSSDMRINITVSDVNDHTPKFSRPVYSFDIPEDTTPGSLVAAILATDDDSGV 1872
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG + LDYE QQ Y+ V
Sbjct: 1873 NGEITYIVNEDDEDGIFFLNPVTGVFNLTRVLDYEAQQYYILTV 1916
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 81/170 (47%), Gaps = 22/170 (12%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL+ Y + N + A + +
Sbjct: 3096 ATIPESHSIGAIVRTVSARDRDAAMNGLIRYSISSGNEEGIFAINSSTGILTLAKALDYE 3155
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
+H+ I D G ++ T +V + V D+ND +P F Y +V E G V
Sbjct: 3156 LCQKHEMTISATDGGWVARTGYCSVTVNVIDVNDNSPVFFPDEYFPTVLENAPSGTTVIH 3215
Query: 123 VHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y+V D+ FV+D NTG I T LD+E +Q Y
Sbjct: 3216 LNATDADSGTNAVIAYTVQSSDSDL-FVIDPNTGVITTQGFLDFETKQSY 3264
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 78/178 (43%), Gaps = 33/178 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y + G L+ + ATD+D G G V + L + TD S F LDP
Sbjct: 588 YAVSVVENAPTGTELLVLGATDRDLGDNGTVRFSLQEAETDQRS-FRLDPVSGRLSTVAS 646
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
AT+ P Q SS A +N+ + D+ND +P F + Y + E
Sbjct: 647 LDREEQAFYSLLVLATDLGSPPQ-----SSMARINVSLLDVNDNSPVFYPVQYFAHIQEN 701
Query: 115 QDGLA-VGRVHATDADEGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ G + + V ATD D G N V YS+ + F V+A +G I T ALD E++ Y
Sbjct: 702 EPGGSYITTVSATDPDLGLNGTVRYSISAGDRSRFQVNAQSGVISTRMALDREEKTAY 759
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 75/173 (43%), Gaps = 21/173 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN------TDAASY-------- 63
FY A + +++V A+D D G GL+ Y ++ N D+ S
Sbjct: 1214 FYQATISESAANLTQVLRVSASDVDEGNNGLIHYSVIKGNEERQFAIDSTSGQVTLIGKL 1273
Query: 64 -FNLDPATEHQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
+ PA D G L+ST T+NI + D ND P F V E + G
Sbjct: 1274 DYEATPAYSLVIQAVDSGAVPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGEL 1333
Query: 120 VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD+D G NA ++YS+ F + NTG I K LD+E Q LY
Sbjct: 1334 VSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSIFLAKKLDFETQSLY 1386
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 71/157 (45%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +ATD DSG +EY LL+ + S +D G + D
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATD 2128
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y+ + E G + +V+A D DEG N
Sbjct: 2129 KGQPALSSSTEVVVMVLDINDNNPVFMQALYKVEINENTLTGTDIIQVYAADGDEGTNGQ 2188
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y + + + F +D+ TG I K LD EK Y
Sbjct: 2189 VRYGIIDGNANQEFRIDSVTGAITVAKPLDREKTPTY 2225
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 38 ATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGGLSSTAT--- 87
ATD D G G+ YR++ N A F LD G + +GGL T
Sbjct: 159 ATDSDIGSNGVDHRSYRIVQGN--EAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQY 216
Query: 88 -------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
VN+ V DIND P F S Y+ VPE G +V +V A D
Sbjct: 217 QLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAAVGSSVLQVAAAD 276
Query: 128 ADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ADEG NA + Y + E PF +D TG I + LD+E ++ Y
Sbjct: 277 ADEGTNADIRYRLQDEGTPFQMDPETGLITVREPLDFEARRQY 319
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 73/168 (43%), Gaps = 22/168 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D + Y ++D + F ++P+T
Sbjct: 2774 SQIFSAYVPENSPLGYTVTRVTTSDEDIDINAISRYSIMDTSLP----FTINPSTGDIVI 2829
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V I VTD+ND P F Y PE + G
Sbjct: 2830 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPELTEIGS 2889
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
V +V ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 2890 KVTQVSATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQVLKYQN 2937
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 24/162 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V A DKDSG G ++Y +++ N + + F ++ AT I+
Sbjct: 2687 ILTVSAMDKDSGPNGQLDYEIVNGNKEHS--FTINHATGEIRSIRPLDREKVSQYVLTIK 2744
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G S + +V I + D ND P F + + VPE G V RV +D D
Sbjct: 2745 SSDKGSPSQSTSVKVIINILDENDNAPRFSQI-FSAYVPENSPLGYTVTRVTTSDEDIDI 2803
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA+ YS+ + +PF ++ +TGDI ++ L+ E Y RV
Sbjct: 2804 NAISRYSIMDTSLPFTINPSTGDIVISRPLNREDTDRYRIRV 2845
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 73/168 (43%), Gaps = 18/168 (10%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF---NLDPAT 70
D L Y + + +V+A DKDSG G + Y + + NT DA F L +
Sbjct: 997 DQLSYEVTLSESEPVNSRFFKVQAFDKDSGANGEIAYSIAEGNTGDAFGIFPDGQLYIKS 1056
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E +QD LS+T V + + D+ND P F S Y F E Q G
Sbjct: 1057 ELDRELQDRYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAG 1116
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
VG+V+A D D G N V YS P F + A +G+I + D E
Sbjct: 1117 SFVGKVNAIDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTRQFDRE 1164
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 27/168 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGPI--- 76
G ++QV A D D G G V Y ++D N A F +D P + P
Sbjct: 2170 GTDIIQVYAADGDEGTNGQVRYGIIDGN--ANQEFRIDSVTGAITVAKPLDREKTPTYSL 2227
Query: 77 ----QDEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDA 128
D G + T TVNI + DIND P F+ PY +VPE L + +V A D
Sbjct: 2228 TVQATDRGSTPRTDTTTVNIVLLDINDFVPMFELSPYSVNVPENLGTLPRTILQVVARDD 2287
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
D+G N+ + Y + ED F + A +G++R ++LD E + ++ V
Sbjct: 2288 DQGSNSKLSYVLFGGNEDNAFTLSA-SGELRVIQSLDRETKAHFVLMV 2334
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPIQ---- 77
T++QV A D D G + Y L N D A + LD T+ +
Sbjct: 2278 TILQVVARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELRVIQSLDRETKAHFVLMVTAT 2337
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNA 134
D G L+ T T+N+ + D+ND P F S Y ++PE G V V+A+DAD NA
Sbjct: 2338 DSGSPALTGTGTINVIIDDVNDNVPTFASKMYFTTIPEDAPTGTDVLLVNASDADASTNA 2397
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V+ + + F ++ +TG I T+ LD E ++ Y
Sbjct: 2398 VIRI-IGGNSQFTINPSTGQIITSALLDRETKENY 2431
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L ATV++ + DIND P+F Y+ ++ E L V RV A+D DEG N +++YSV
Sbjct: 1190 LKDQATVHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSV 1249
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E+ F +D+ +G + LDYE Y
Sbjct: 1250 IKGNEERQFAIDSTSGQVTLIGKLDYEATPAY 1281
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 76/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3210 GTTVIHLNATDADSGTNAVIAYTVQSSDSD---LFVIDPNT---GVITTQGFLDFETKQS 3263
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S AT+NI++ N+ P F S Y F + E G VG V A+
Sbjct: 3264 YHLTVKAFNVPDEERCSFATINIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFAS 3323
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F ++ TG I + LD EK+ ERV L
Sbjct: 3324 DRDLGADGEVHYLIFGNSRKKGFQINKKTGQIYVSGLLDREKE----ERVSL 3371
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQGPI 76
++G L++V A D +D G VEY + LDN T S + + +Q +
Sbjct: 2997 KVGTKLIKVTAVDDRDFGLNSEVEYLISNENHFGKFKLDNGTGWISVASSLISDLNQNFL 3056
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D+G LSS ATV I VT+ N PEF ++PE G V V A D
Sbjct: 3057 ITVTARDKGNPPLSSQATVQIIVTEENYHTPEFSQSHMSATIPESHSIGAIVRTVSARDR 3116
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
D N ++ YS+ E+ F ++++TG + KALDYE Q +
Sbjct: 3117 DAAMNGLIRYSISSGNEEGIFAINSSTGILTLAKALDYELCQKH 3160
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 68/171 (39%), Gaps = 32/171 (18%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPATEHQGPIQ 77
+ + G ++ Q KA D D G G+V Y L N N + L P H G Q
Sbjct: 904 ENWQAGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINEKNGNISLLGPLDVHAGSYQ 963
Query: 78 DE--------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
E LSS+ + + V D+ND P F L YE ++ E + +V A D
Sbjct: 964 IEILASDMGVPQLSSSFVLTVYVHDVNDNPPVFDQLSYEVTLSESEPVNSRFFKVQAFDK 1023
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYL 170
D G N + YS+ E NTGD + LD E Q Y+
Sbjct: 1024 DSGANGEIAYSIAE-------GNTGDAFGIFPDGQLYIKSELDRELQDRYV 1067
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1724 AEVEITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTYTIISGA 1783
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ K LD E++ Y
Sbjct: 1784 DDSFRIDPESGDLIATKRLDRERRSKY 1810
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV- 140
LSS +++ V D+ND +P F+ P+ + E + V A D D G N + Y +
Sbjct: 2649 LSSYEKLDLTVLDVNDNSPVFREDPFVSEILENLSPRKILTVSAMDKDSGPNGQLDYEIV 2708
Query: 141 --PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
++ F ++ TG+IR+ + LD EK Y+
Sbjct: 2709 NGNKEHSFTINHATGEIRSIRPLDREKVSQYV 2740
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LSS+ +V + VTD+ND P FQ PY +P G V V TDAD G N+ ++YS+
Sbjct: 2446 LSSSTSVLVTVTDVNDNPPRFQHHPYVTHIPSPTPPGSFVFAVTVTDADIGPNSELHYSL 2505
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 9/157 (5%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDE 79
G+++ +L + + T G F + + + + AS + + + +Q +
Sbjct: 813 GSVSASTMDLNSNISYLITTGDQKGMFAINQ---VTGHLTTASVIDREEQSFYQLKVVAS 869
Query: 80 GG-LSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVY 137
GG ++ VNI V D+ND +P F Q++ V Q G ++ + A D DEG N +V
Sbjct: 870 GGTVTGDTVVNITVKDLNDNSPHFLQAVESVNVVENWQAGHSIFQAKAVDPDEGVNGMVL 929
Query: 138 YSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
YS+ P+++ F ++ G+I LD +E
Sbjct: 930 YSLKQNPKNL-FAINEKNGNISLLGPLDVHAGSYQIE 965
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N V Y + +
Sbjct: 1515 VTILVTDLNDNVPMFISQNALAADPAAVIGSVLTTIMAADPDEGANGEVEYEIINGDTDT 1574
Query: 146 FVVDANTGDIRTNKAL 161
F+VD +GD+R AL
Sbjct: 1575 FIVDRYSGDLRVASAL 1590
Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG + Y + N F++ P T E Q
Sbjct: 1329 RIGELVSSVTATDSDSGDNADLHYSITGTNNHGT--FSISPNTGSIFLAKKLDFETQSLY 1386
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G SST +V I V D ND P F S+ E G +V V A D
Sbjct: 1387 KLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVTAHD 1446
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + Y++ + +P F +D G I TN +D E L+
Sbjct: 1447 PDADINGQLSYAIVQQMPRGNHFGIDEVKGTIYTNAEIDREFANLF 1492
Score = 39.3 bits (90), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 55/123 (44%), Gaps = 5/123 (4%)
Query: 59 DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
++ S++NL H P +STA V+I + D+ND P F S P +PE
Sbjct: 2009 ESQSFYNL-VVQVHDLPQLPASRFTSTAHVSIILLDVNDNPPAFLS-PKLTYIPENTPID 2066
Query: 118 LAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
V + ATD D G N+ + Y++ P F + G++R LD E+ Y V
Sbjct: 2067 TIVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2126
Query: 176 ISK 178
K
Sbjct: 2127 TDK 2129
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV 140
SS A++ I V DIND P F Y ++ E G V V ATD D G NA + YS+
Sbjct: 456 SSVASLVIFVNDINDHPPVFAQQVYRVNLSEEAPPGSYVSGVSATDGDSGLNANLRYSI 514
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 66/174 (37%), Gaps = 20/174 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G V Y + + ++ LD
Sbjct: 694 YFAHIQENEPGGSYITTVSATDPDLGLNGTVRYSISAGDRSRFQVNAQSGVISTRMALDR 753
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V I V D D P F Y F V E G VG
Sbjct: 754 EEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAYSFVVFENVALGYHVG 813
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A+ D N + Y D F ++ TG + T +D E+Q Y +V
Sbjct: 814 SVSASTMDLNSN-ISYLITTGDQKGMFAINQVTGHLTTASVIDREEQSFYQLKV 866
>gi|344236025|gb|EGV92128.1| Cadherin EGF LAG seven-pass G-type receptor 3 [Cricetulus griseus]
Length = 3109
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 85/176 (48%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQ--GP 75
Y A R+ +++V ATD+D GLV Y ++ N+ +F +D T E Q P
Sbjct: 471 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRG--HFAIDSLTGEIQVVAP 528
Query: 76 I--------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ QD G ++T +I+V DIND P F S P++ SV E G
Sbjct: 529 LDFEAEREYVLRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIFVSTPFQVSVLENAPLG 588
Query: 118 LAVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+V + A DAD G+N+ + YS V D PFV+++ TG + + LD E + Y
Sbjct: 589 HSVIHIQAVDADHGENSRLEYSLTGVAPDTPFVINSATGWVSVSGPLDRESVEHYF 644
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 88/185 (47%), Gaps = 32/185 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN---NTDAASYFNLDPAT----- 70
Y R+ E G ++Q++ATD D+ + YR + + ++AA+ F +DP +
Sbjct: 359 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGSPAARSEAAAAFEIDPRSGLIST 418
Query: 71 ------EH------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH QG Q+ G S+T V+I V D ND P+F Y V
Sbjct: 419 SGRVDREHMESYELVVEASDQG--QEPGPRSATVRVHITVLDENDNTPQFSEKRYVAQVR 476
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E + V RV ATD D+ N +V+Y++ F +D+ TG+I+ LD+E ++
Sbjct: 477 EDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVVAPLDFEAERE 536
Query: 169 YLERV 173
Y+ R+
Sbjct: 537 YVLRI 541
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQG 74
+++Q+ ATD+D+ G V+Y N D F ++P + E
Sbjct: 900 SVLQISATDRDAHANGRVQY-TFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVYELTA 958
Query: 75 PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G L + ++ + V D+ND P F + +E V E G V ++ A D DEG
Sbjct: 959 YAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDEG 1018
Query: 132 QNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE +Q Y+
Sbjct: 1019 PNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYV 1060
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V+I +TD N P FQS Y S+ E + G V + A+D D G+NA + Y + +++P
Sbjct: 765 VHINITDANTHRPVFQSAHYSVSMNEDRPVGSTVVVISASDDDVGENARITYLLEDNLPQ 824
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DAN+G I LDYE Q Y
Sbjct: 825 FRIDANSGAITLQAPLDYEDQVTY 848
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 29/180 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT------- 70
Y + + G +++V A D D G+ G + Y L N+ + F++DP +
Sbjct: 251 YQTLVPENEAAGTAVLRVVAQDPDPGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 310
Query: 71 --------EH--QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
H + QD G LS+T V + V D ND P F+ Y ++ E ++G
Sbjct: 311 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAHYRETLRENVEEG 370
Query: 118 LAVGRVHATDADEGQNAVVYY--------SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ ++ ATD D NA + Y F +D +G I T+ +D E + Y
Sbjct: 371 YPILQLRATDGDAPPNANLRYRFVGSPAARSEAAAAFEIDPRSGLISTSGRVDREHMESY 430
Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEH 72
S Y + +G T++ + A+D D G+ + Y L DN F +D A
Sbjct: 781 SAHYSVSMNEDRPVGSTVVVISASDDDVGENARITYLLEDN----LPQFRIDANSGAITL 836
Query: 73 QGPIQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQD 116
Q P+ E ++ T + R V D+ND P+F + Y V E
Sbjct: 837 QAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAP 896
Query: 117 GL-AVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ++ ATD D N V Y+ D F ++ +G +RT + LD E +Y
Sbjct: 897 PFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVPVY 954
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 72/177 (40%), Gaps = 30/177 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGPI--------- 76
LG +++ ++A D D G+ +EY L D F ++ AT GP+
Sbjct: 587 LGHSVIHIQAVDADHGENSRLEYSLTGVAPDTP--FVINSATGWVSVSGPLDRESVEHYF 644
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDA 128
+D G LS++A+V + V D+ND PEF Y + E G +V V A D
Sbjct: 645 FGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNEDAAVGTSVVSVTAVDR 704
Query: 129 DEGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
D N+ + Y + G + LDY KQ+ Y + V S A
Sbjct: 705 DA--NSAISYQITGGNSRNRFAISTQGGVGLVTLALPLDY-KQERYFKLVLTASDRA 758
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVD 149
+++P+F Y+ VPE + G AV RV A D D G+ + YS+ + F +D
Sbjct: 241 NRHPQFPQYNYQTLVPENEAAGTAVLRVVAQDPDPGEAGRLVYSLAALMNSRSLELFSID 300
Query: 150 ANTGDIRTNKALDYEKQQLYLERV 173
+G IRT ALD E + + RV
Sbjct: 301 PQSGLIRTAAALDRESMERHYLRV 324
>gi|281345418|gb|EFB21002.1| hypothetical protein PANDA_000359 [Ailuropoda melanoleuca]
Length = 800
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 74/149 (49%), Gaps = 17/149 (11%)
Query: 34 MQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVT 93
+ VK D+ + GLV + LD +A + L AT DEG T TV + VT
Sbjct: 180 LDVKTNSDDNTQIGLVLRKSLDRE-EAPEHNLLLTAT-------DEGKPELTGTVQLLVT 231
Query: 94 --DINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDIP----- 145
D+ND P F+ YE + E +G V R++A+D DEG N + YS +P
Sbjct: 232 VLDVNDNAPSFEQTEYEVRIFENSGNGTIVIRLNASDRDEGVNGEISYSFNSLVPTVVRD 291
Query: 146 -FVVDANTGDIRTNKALDYEKQQLYLERV 173
F +D NTG+I T LD+EK LY RV
Sbjct: 292 QFRIDPNTGEIVTKGNLDFEKLNLYKIRV 320
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LS+TA+V++ V D+ND P F Y V E G + V A DAD +NA+V YS+
Sbjct: 435 LSATASVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSARDADAQENALVSYSL 494
Query: 141 PED-------IPFV-VDANTGDIRTNKALDYEKQQL 168
E +V V A +G + + LD+E+ +L
Sbjct: 495 VERRVGERALSSYVSVHAESGKVYALQPLDHEELEL 530
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 75/197 (38%), Gaps = 39/197 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------------NTDAASYFN 65
Y ++ + G + V A D D+ + LV Y L++ + ++ +
Sbjct: 460 YTVFVKENNPPGCHIFTVSARDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYA 519
Query: 66 LDPA-------TEHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLP---------- 106
L P + Q +D G L S T+ + V D ND P L
Sbjct: 520 LQPLDHEELELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPALLPLRPGAGGAGGAL 579
Query: 107 YEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI-----PFVVDANTGDIRTNKAL 161
E G V +V A DAD G NA + Y + PF V TG+I T ++L
Sbjct: 580 SELVSRSVGAGHVVAKVRAVDADSGYNAWLSYELQPAAGGARSPFRVALYTGEISTTRSL 639
Query: 162 DYEKQQLYLERVFLISK 178
D + L +R+ ++ K
Sbjct: 640 D--EADLARQRLLVLVK 654
>gi|354473664|ref|XP_003499053.1| PREDICTED: cadherin-8-like isoform 2 [Cricetulus griseus]
Length = 716
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 86/185 (46%), Gaps = 31/185 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + LG ++ V ATD D +G +L+ + + YF+++P T
Sbjct: 172 YHATVPEMSILGTSVTNVTATDADDPVYG-NSAKLVYSILEGQPYFSIEPETAIIKTALP 230
Query: 71 --------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
E+ IQ + GGLS T T+ + +TD+ND P+F Y FSVPE
Sbjct: 231 NMDREAKEEYLVVIQAKDMGGHSGGLSGTTTLPVTLTDVNDNPPKFAQSLYHFSVPEDVV 290
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQL 168
G A+GRV A D D G+NA Y + + +I A G IR K LD+E ++
Sbjct: 291 LGTAIGRVKANDQDIGENAQSSYDIIDGDGTALFEITSDAQAQDGVIRLRKPLDFETKKS 350
Query: 169 YLERV 173
Y +V
Sbjct: 351 YTLKV 355
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND PEF + PY +VPE G +V V ATDAD+ G +A + YS+ E P
Sbjct: 155 IKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEGQP 214
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLYL 170
F ++ T I+T +D E ++ YL
Sbjct: 215 YFSIEPETAIIKTALPNMDREAKEEYL 241
Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNA--VVYYSVP 141
S V I+V D+ND PEF + F G+ G + V A D D+ +N +Y +P
Sbjct: 478 SRVPVAIKVLDVNDNAPEFAAEYEAFLCENGKPGQVIQTVSAMDKDDPKNGHYFLYSLLP 537
Query: 142 EDI---PFVVDANTGD----IRTNKALDYEKQQLYL 170
E + F + N + + + + +KQ++YL
Sbjct: 538 EMVNNPNFTIKKNEDNSLSILAKHNGFNRQKQEVYL 573
>gi|301753567|ref|XP_002912659.1| PREDICTED: protocadherin alpha-6-like [Ailuropoda melanoleuca]
Length = 815
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 74/149 (49%), Gaps = 17/149 (11%)
Query: 34 MQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVT 93
+ VK D+ + GLV + LD +A + L AT DEG T TV + VT
Sbjct: 188 LDVKTNSDDNTQIGLVLRKSLDRE-EAPEHNLLLTAT-------DEGKPELTGTVQLLVT 239
Query: 94 --DINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDIP----- 145
D+ND P F+ YE + E +G V R++A+D DEG N + YS +P
Sbjct: 240 VLDVNDNAPSFEQTEYEVRIFENSGNGTIVIRLNASDRDEGVNGEISYSFNSLVPTVVRD 299
Query: 146 -FVVDANTGDIRTNKALDYEKQQLYLERV 173
F +D NTG+I T LD+EK LY RV
Sbjct: 300 QFRIDPNTGEIVTKGNLDFEKLNLYKIRV 328
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LS+TA+V++ V D+ND P F Y V E G + V A DAD +NA+V YS+
Sbjct: 443 LSATASVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSARDADAQENALVSYSL 502
Query: 141 PED-------IPFV-VDANTGDIRTNKALDYEKQQL 168
E +V V A +G + + LD+E+ +L
Sbjct: 503 VERRVGERALSSYVSVHAESGKVYALQPLDHEELEL 538
Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 75/197 (38%), Gaps = 39/197 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------------NTDAASYFN 65
Y ++ + G + V A D D+ + LV Y L++ + ++ +
Sbjct: 468 YTVFVKENNPPGCHIFTVSARDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYA 527
Query: 66 LDPA-------TEHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLP---------- 106
L P + Q +D G L S T+ + V D ND P L
Sbjct: 528 LQPLDHEELELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPALLPLRPGAGGAGGAL 587
Query: 107 YEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI-----PFVVDANTGDIRTNKAL 161
E G V +V A DAD G NA + Y + PF V TG+I T ++L
Sbjct: 588 SELVSRSVGAGHVVAKVRAVDADSGYNAWLSYELQPAAGGARSPFRVALYTGEISTTRSL 647
Query: 162 DYEKQQLYLERVFLISK 178
D + L +R+ ++ K
Sbjct: 648 D--EADLARQRLLVLVK 662
>gi|403271744|ref|XP_003927769.1| PREDICTED: protocadherin Fat 4 [Saimiri boliviensis boliviensis]
Length = 4981
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 83/170 (48%), Gaps = 22/170 (12%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL++Y + N + A + +
Sbjct: 3096 ATIPESHGIGSIVRTVSARDRDTAMNGLIKYSISSGNEEGIFAINSSTGVLTLAKALDYE 3155
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
+H+ I D G ++ T +V + V D+ND +P F S Y +V E G V
Sbjct: 3156 LCQKHEMTISATDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGTTVIH 3215
Query: 123 VHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y+V D+ FV+D NTG I T LD+E +Q Y
Sbjct: 3216 LNATDADSGTNAVIAYTVQSSDSDL-FVIDPNTGVITTQGFLDFETKQSY 3264
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F +DP + E +
Sbjct: 1756 GSKIMQLTAMDADEGANALVTYTIISGADDS---FRIDPESGDLIATRRLDRERRSKYSL 1812
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQ 132
D+G SS +NI V+D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1813 LVRADDGLQSSDMRINITVSDVNDHTPKFSRPVYSFDIPEDTIPGSLVAAILATDDDSGA 1872
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG + LDYE QQ Y+ V
Sbjct: 1873 NGEITYIVNEDDEDGIFFLNPITGVFNLTRVLDYEVQQYYILTV 1916
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 75/162 (46%), Gaps = 23/162 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------------ 77
G L+ ++ATD D G G V + L + TD S F LDP + I
Sbjct: 599 GTELLVLRATDGDLGDNGTVRFSLQEAETDRRS-FRLDPVSGRLSTISSLDREDQAFYSL 657
Query: 78 -----DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
D G SS A +N+ + DIND +P F + Y + E + G + + V ATD D
Sbjct: 658 LVLATDMGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKENEPGGSYITTVSATDPD 717
Query: 130 EGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V YS+ + F V+A +G I T ALD E++ Y
Sbjct: 718 LGTNGTVKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAY 759
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 24/162 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V A DKDSG G ++Y +++ N + + F ++ AT I+
Sbjct: 2687 VLTVSAMDKDSGPNGQLDYEIVNGNMENS--FTINHATGEIRSIRPLDREKISHYVLTIK 2744
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G S +A+V I + D ND P F + + VPE G V RV +D D G
Sbjct: 2745 SSDKGSPSQSASVKVMINILDENDNAPRFSQI-FSAHVPENSPLGYTVTRVTTSDEDIGI 2803
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA+ YS+ + +PF ++ +TGDI ++ L+ E Y RV
Sbjct: 2804 NAISRYSIMDTSLPFTINPSTGDIIISRPLNREDTDRYRIRV 2845
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 75/175 (42%), Gaps = 25/175 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
FY A + +++V A+D D G GL+ Y ++ N + F +D + I
Sbjct: 1214 FYQATISESAANLTQVLRVSASDVDEGNNGLIHYSIIKGNEERQ--FAIDSTSGQVALIG 1271
Query: 78 -----------------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
D G L+ST T+NI + D ND P F V E + G
Sbjct: 1272 KLDYEATPTYSLVIEAVDSGTISLNSTCTLNIDILDENDNTPSFPKTTLFVDVLENMRIG 1331
Query: 118 LAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD+D G NA ++YS+ F + NTG I K LD+E Q LY
Sbjct: 1332 ELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSIFLAKKLDFETQSLY 1386
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 22/167 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y ++D + F ++P+T
Sbjct: 2774 SQIFSAHVPENSPLGYTVTRVTTSDEDIGINAISRYSIMDTSLP----FTINPSTGDIII 2829
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V I VTD+ND P F Y PE + G
Sbjct: 2830 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPELTETGS 2889
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
V +V ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 2890 KVTQVSATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQILKYQ 2936
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 71/161 (44%), Gaps = 20/161 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +ATD DSG +EY LL+ S +D G + D
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNPLGSKFSIGTIDGEVRLTGELDREEVSNYTLTVVATD 2128
Query: 79 EGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+A V + V DIND NP F Y+ + E G + +V A D DEG N
Sbjct: 2129 KGQPPLSSSAEVVVMVLDINDNNPIFAQALYKVEINENTLTGTDIIQVFAADGDEGTNGQ 2188
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V Y + + F +D+ TG I K LD EK YL V
Sbjct: 2189 VRYGIVNGNTNQEFRIDSVTGAITVAKPLDREKTPTYLLTV 2229
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 38 ATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGGLSSTAT--- 87
ATD D G G+ YR++ N A F LD G + +GGL T
Sbjct: 159 ATDSDIGSNGVDHRSYRIIRGN--EAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQY 216
Query: 88 -------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
VN+ V DIND P F S Y+ VPE G +V +V A D
Sbjct: 217 QLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAAD 276
Query: 128 ADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ADEG NA + Y + E PF +D TG I + LD+E ++ Y
Sbjct: 277 ADEGTNADIRYRLQDEGTPFQMDPETGLITVREPLDFEARRQY 319
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 72/155 (46%), Gaps = 18/155 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPIQ---- 77
T++QV A D D G + Y L N D A + LD T+ +
Sbjct: 2278 TILQVVARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELRVTQSLDRETKEHFVLTITAT 2337
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNA 134
D G L+ T T+N+ V D+ND P F S Y ++PE G V V+A+DAD NA
Sbjct: 2338 DSGSPALTGTGTINVIVDDVNDNVPTFASKSYFTTIPEDAPTGTDVLLVNASDADTSTNA 2397
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V+ + + F ++ +TG I T+ LD E + Y
Sbjct: 2398 VIRI-IGGNSQFTINPSTGQIITSALLDRETKDNY 2431
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 80/188 (42%), Gaps = 23/188 (12%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF---NLDPAT 70
D L Y + + +V+A+DKDSG G + Y + + NT DA F L +
Sbjct: 997 DQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYAIAEGNTGDAFGIFPDGQLYIKS 1056
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E +QD LS+T V + + D+ND P F S Y F E Q G
Sbjct: 1057 ELDRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAG 1116
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLER---V 173
VG+V A D D G N V YS P F + A +G+I D ++ L R V
Sbjct: 1117 SFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTHQFD--RESLMRRRGTAV 1174
Query: 174 FLISKFAT 181
F + AT
Sbjct: 1175 FTFTVIAT 1182
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 27/165 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGPI--- 76
G ++QV A D D G G V Y +++ NT+ F +D P + P
Sbjct: 2170 GTDIIQVFAADGDEGTNGQVRYGIVNGNTNQE--FRIDSVTGAITVAKPLDREKTPTYLL 2227
Query: 77 ----QDEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDA 128
D G T+TV+I + DIND P F+ PY +VPE L + +V A D
Sbjct: 2228 TVQATDRGSTPRKDTSTVSIALLDINDFVPIFELSPYSVNVPENLGTLPRTILQVVARDD 2287
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D+G N+ + Y + ED F + A +G++R ++LD E ++ ++
Sbjct: 2288 DQGSNSKLSYVLFGGNEDNAFTLSA-SGELRVTQSLDRETKEHFV 2331
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 76/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3210 GTTVIHLNATDADSGTNAVIAYTVQSSDSD---LFVIDPNT---GVITTQGFLDFETKQS 3263
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S ATVN+++ N+ P F S Y F + E G VG V A+
Sbjct: 3264 YHLTVKAFNVPDEERCSFATVNVQLKGTNEYVPRFVSKLYYFEISEAAPKGTVVGEVFAS 3323
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F ++ TG I + LD EK+ ERV L
Sbjct: 3324 DRDLGTDGEVHYLIFGNSRKKGFQINKKTGQIYVSGILDREKE----ERVSL 3371
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L ATV++ + DIND P+F Y+ ++ E L V RV A+D DEG N +++YS+
Sbjct: 1190 LKDQATVHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSI 1249
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E+ F +D+ +G + LDYE Y
Sbjct: 1250 IKGNEERQFAIDSTSGQVALIGKLDYEATPTY 1281
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 71/174 (40%), Gaps = 32/174 (18%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPATEHQGPIQ 77
+ + G ++ Q KA D D G G+V Y L N N + L P H G Q
Sbjct: 904 ENWQAGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINEKNGTISLLGPLDVHAGSYQ 963
Query: 78 DE--------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
E LSS+ + + V D+ND +P F L YE ++ E + +V A+D
Sbjct: 964 IEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVNSRFFKVQASDK 1023
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYLERV 173
D G N + Y++ E NTGD + LD E Q Y+ V
Sbjct: 1024 DSGANGEIAYAIAE-------GNTGDAFGIFPDGQLYIKSELDRELQDRYVLMV 1070
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 78/164 (47%), Gaps = 22/164 (13%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQG-- 74
++G L++V A D KD G VEY + LDN+T S + + +Q
Sbjct: 2997 KVGTKLIKVTAIDDKDFGLNSEVEYFISNDNHLGKFKLDNDTGWISVASSLISDLNQNFF 3056
Query: 75 ---PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D+G LSS ATV I VT+ N PEF ++PE G V V A D
Sbjct: 3057 ITVTAKDKGNPPLSSQATVQITVTEENYHTPEFSQSHMSATIPESHGIGSIVRTVSARDR 3116
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
D N ++ YS+ E+ F ++++TG + KALDYE Q +
Sbjct: 3117 DTAMNGLIKYSISSGNEEGIFAINSSTGVLTLAKALDYELCQKH 3160
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1724 AEVEITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTYTIISGA 1783
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ + LD E++ Y
Sbjct: 1784 DDSFRIDPESGDLIATRRLDRERRSKY 1810
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LSS+ +V + VTD+ND P FQ PY +P G V V TDAD G N+ ++YS+
Sbjct: 2446 LSSSTSVLVTVTDVNDNPPRFQHHPYVTHIPSPTVPGSFVFAVTVTDADIGPNSELHYSL 2505
Score = 42.4 bits (98), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
G ++ VNI V D+ND +P F Q++ V Q G ++ + A D DEG N +V Y
Sbjct: 871 GTVTGDTVVNITVKDLNDNSPHFLQAIESVNVVENWQAGHSIFQAKAVDPDEGVNGMVLY 930
Query: 139 SV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
S+ P+++ F ++ G I LD +E
Sbjct: 931 SLKQNPKNL-FAINEKNGTISLLGPLDVHAGSYQIE 965
Score = 42.4 bits (98), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
SS ++I V D+ND P F+ P+ + E V V A D D G N + Y +
Sbjct: 2649 FSSYEKLDITVLDVNDNAPIFKEDPFVSEILENLSPRKVLTVSAMDKDSGPNGQLDYEIV 2708
Query: 142 E---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ F ++ TG+IR+ + LD EK Y+
Sbjct: 2709 NGNMENSFTINHATGEIRSIRPLDREKISHYV 2740
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG + Y + N F++ P T E Q
Sbjct: 1329 RIGELVSSVTATDSDSGDNADLHYSITGTNNHGT--FSISPNTGSIFLAKKLDFETQSLY 1386
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G SST +V I V D ND P F S+ E G +V V A D
Sbjct: 1387 KLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVTAHD 1446
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + Y++ + +P F +D G I TN +D E L+
Sbjct: 1447 PDADINGQLSYTIIQQMPRGNHFTIDEVKGTIYTNAEIDREFANLF 1492
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 68/174 (39%), Gaps = 20/174 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G V+Y + + ++ LD
Sbjct: 694 YFAHIKENEPGGSYITTVSATDPDLGTNGTVKYSISAGDRSRFQVNAQSGVISTRMALDR 753
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V I V D D P F + Y F V E G VG
Sbjct: 754 EEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFENVALGYHVG 813
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A+ D N + Y D F ++ TG + T +D E+Q Y +V
Sbjct: 814 SVSASTMDLNSN-ITYLITTGDQKGMFAINQVTGQLTTANVIDREEQSFYQLKV 866
Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N V Y + +
Sbjct: 1515 VTILVTDLNDNVPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEVEYEIINGDTDT 1574
Query: 146 FVVDANTGDIRTNKAL 161
F+VD +GD+R AL
Sbjct: 1575 FIVDRYSGDLRVASAL 1590
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 55/123 (44%), Gaps = 5/123 (4%)
Query: 59 DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
++ S++NL H P +STA V+I + D+ND P F S P +PE
Sbjct: 2009 ESQSFYNL-VVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLS-PKLTYIPENTPID 2066
Query: 118 LAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
V + ATD D G N+ + Y++ P F + G++R LD E+ Y V
Sbjct: 2067 TVVFKAQATDPDSGPNSYIEYTLLNPLGSKFSIGTIDGEVRLTGELDREEVSNYTLTVVA 2126
Query: 176 ISK 178
K
Sbjct: 2127 TDK 2129
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV 140
SS A++ I V DIND P F Y ++ E G V V ATD D G NA + YS+
Sbjct: 456 SSVASLVIFVNDINDHPPVFSQQVYRVNLSEEAPPGSYVSGVSATDGDSGLNANLRYSI 514
>gi|410917772|ref|XP_003972360.1| PREDICTED: protocadherin-23-like [Takifugu rubripes]
Length = 3262
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 82/176 (46%), Gaps = 25/176 (14%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE--------- 71
A + E G L + + D D G GLV Y +L NT F L+ T
Sbjct: 1517 AQVMEDAEAGSLLHRFVSKDGDEGGNGLVSYTILTGNTKGV--FTLEEKTGLLFLSAPLD 1574
Query: 72 ------HQGPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAV 120
H I+ D G LSST T + V D+ND++P F Y SV E +D G V
Sbjct: 1575 YEAQRLHHLTIRAADHGLPPLSSTQTFTVEVGDVNDRSPVFSQNIYNASVAENRDPGEPV 1634
Query: 121 GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
RV ATD D +NAVV+YS+ P F ++ +TG I T LD E+Q + RV
Sbjct: 1635 VRVSATDDDSEENAVVWYSLLPGPGYELFSINPHTGLITTASYLDREQQPHFSLRV 1690
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 84/179 (46%), Gaps = 24/179 (13%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + + G +++V ATD DS + +V Y LL F+++P T
Sbjct: 1619 IYNASVAENRDPGEPVVRVSATDDDSEENAVVWYSLLPG--PGYELFSINPHTGLITTAS 1676
Query: 71 ---EHQGP-------IQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
Q P +D G LS+TATV V D ND P F + S+PE
Sbjct: 1677 YLDREQQPHFSLRVQARDSGSRPLSATATVLCSVLDDNDNPPRFMQSSFRVSLPENLPPG 1736
Query: 119 AVGRVHATDADEGQNAVVYYSVP-EDIP--FVVDANTGDIRTNKALDYEKQQLYLERVF 174
A+ A+D D G+N ++YS+ ED FVV++ +G + T K LD E++Q Y ++
Sbjct: 1737 AIHTAQASDPDLGENGTIHYSIAGEDGAGCFVVNSRSGVVSTTKVLDREEKQNYTLTIW 1795
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 74/166 (44%), Gaps = 32/166 (19%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP------IQD 78
V A DKDSG + Y LL + +F ++ T EH + D
Sbjct: 1103 VSAVDKDSGINAQLSYILLSD----GKFFRINAKTGEIINWVALDREHHSQHTLKVMVTD 1158
Query: 79 EGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSV-----PEGQDGLAVGRVHATDADEG 131
+G L++TATV+I VTD ND P+F LP V E G V + A D+D G
Sbjct: 1159 QGHARLNATATVHILVTDTNDNPPQFTHLPASKEVNVQIWAEVPAGSLVTNMFAKDSDAG 1218
Query: 132 QNAVVYYS-VPEDI---PFVVDANTGDIRTNKALDYEKQQLYLERV 173
+N V S VPE+ FV+D TGDI T + + Y R+
Sbjct: 1219 ENGTVALSLVPEEAGPSHFVIDGETGDISTTEHFSQNSRSFYTLRI 1264
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV 140
LSS+ + + + D ND P F Y+ SV EG G V R+ A D DEG N V YS+
Sbjct: 1804 LSSSTQLQLVLLDQNDNAPSFSRKSYQASVSEGLPPGAEVLRLSAFDPDEGPNGHVTYSL 1863
Query: 141 PEDI---PFVVDANTGDIRTNKALDYEKQQLYLER 172
ED F VD+ TG IRT ++LD E + Y R
Sbjct: 1864 TEDSSHGAFSVDSLTGAIRTTRSLDREGRAQYTIR 1898
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 37/166 (22%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLD---PATEHQGPI------------QD---- 78
A D+D +FG+ YR+ ++ D F+LD +E + QD
Sbjct: 147 AKDEDEDEFGIQGYRIRESEMD--DLFHLDYHRSGSEKHLSLDLLLMSRLDREAQDFYSL 204
Query: 79 -----EGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
+GG+ + T +NIRV D ND P F Y SVPE ++ V +VHATD D
Sbjct: 205 TVEAFDGGVPPRTGTLQLNIRVLDENDNPPVFNQTEYHASVPEDAPLMSPVCQVHATDLD 264
Query: 130 EGQNAVVYYSV------PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G N + Y + P ++ F ++ +G + NK LDYE Q +
Sbjct: 265 LGDNGRITYEINRRQSDPNEV-FSINRTSGVVYLNKPLDYEAQVFH 309
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-----ATE--------------HQ 73
+MQV A+D D G G +EY ++ + + A F LD AT Q
Sbjct: 2153 IMQVFASDADGGINGQIEYSIVSGDPNQA--FILDSVRGILATNVLLDREITPSYKLVLQ 2210
Query: 74 GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQN 133
+ E LSSTATV ++V D+ND P + G V +V A D D +
Sbjct: 2211 AADKGEPPLSSTATVRVQVVDVNDNIPAIPPMEPVVIAENRPAGHTVTQVTANDVD--LS 2268
Query: 134 AVVYYSVPED----IPFVVDANTGDIRTNKALDYEKQQLY 169
+ + YS+ + PF +D TG + +ALDYE+Q Y
Sbjct: 2269 STITYSLSAEGSTRSPFAIDQYTGVVTLTQALDYEEQAEY 2308
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV 140
LSS +RVTD ND P F+ Y SVPE G ++ R+ DADEG NA V YS+
Sbjct: 432 LSSEVVFLLRVTDTNDCRPVFEKDAYAVSVPEDAPQGSSLIRMQTRDADEGANAAVRYSI 491
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEK-QQLYL 170
+D ++ +G I T LD E +QL+
Sbjct: 492 LRSNQDGLVSIEPESGLITTAAPLDREALEQLWF 525
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 69/171 (40%), Gaps = 30/171 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD--NNTDAASYFNLDPATEHQGP 75
Y A + +G +QV ATD DS +FG + Y L D + + F++ P T
Sbjct: 561 LYNATVPEHSGVGSCFLQVVATDADSREFGTLLYSLSDGFDGQERHPLFHVQPQTGELCV 620
Query: 76 IQD------------------EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQD 116
QD GGLS+ V++ V D+ND P F Y S+ Q
Sbjct: 621 SQDIDRDLGQTVHDILIRAEDPGGLSAQTYVHVEVEDLNDHAPVFNPDEYTVSISSHAQP 680
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKAL 161
G + V ATD D G+ V Y + IP F VD TG + L
Sbjct: 681 GAELLNVIATDRDSGRFGQVTYDI---IPGDGSGLFDVDPQTGTLTLTSPL 728
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 29/165 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQDE------- 79
G +L++++ D D G V Y +L +N D +++P + P+ E
Sbjct: 468 GSSLIRMQTRDADEGANAAVRYSILRSNQDG--LVSIEPESGLITTAAPLDREALEQLWF 525
Query: 80 ------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
GG LSSTATV + V D+ND P FQ Y +VPE G +V ATDAD
Sbjct: 526 LVVAADGGEPSLSSTATVTVLVLDVNDNEPVFQQQLYNATVPEHSGVGSCFLQVVATDAD 585
Query: 130 EGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYEKQQ 167
+ + YS+ + F V TG++ ++ +D + Q
Sbjct: 586 SREFGTLLYSLSDGFDGQERHPLFHVQPQTGELCVSQDIDRDLGQ 630
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD--GLAVGRVHATDADEGQNAVVYYSV 140
++TA + + V D+ND P F S Y F+V E GL VG V A D D G NA + Y +
Sbjct: 1062 TATAELTVSVLDVNDNAPVFSSEVYHFTVSEAPSPQGL-VGTVSAVDKDSGINAQLSYIL 1120
Query: 141 PEDIPFV-VDANTGDIRTNKALDYEKQQLYLERVFL 175
D F ++A TG+I ALD E + +V +
Sbjct: 1121 LSDGKFFRINAKTGEIINWVALDREHHSQHTLKVMV 1156
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 73/166 (43%), Gaps = 21/166 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLV-------EYRLLDNN---------TDAAS 62
Y A ++ G + +V+AT + + +V E+ L N D A
Sbjct: 2036 YNATIQENSRAGTWITKVEATGRADSRQSVVYSIFSGNEHSLFSINHHTGEIRVQKDYAL 2095
Query: 63 YFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVG 121
F L P H + + G ++ V+I + D+ND P F Y +V EGQ +
Sbjct: 2096 DFELSPHI-HLVVLAENGLQTTHCRVSISLLDVNDNAPRFDYSSYRTAVWEGQAHNTYIM 2154
Query: 122 RVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
+V A+DAD G N + YS+ P F++D+ G + TN LD E
Sbjct: 2155 QVFASDADGGINGQIEYSIVSGDPNQAFILDSVRGILATNVLLDRE 2200
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 70/187 (37%), Gaps = 38/187 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y R+ +G L+QV A D D G G +++ ++ N ++ LDP +
Sbjct: 2565 YHTQVRENSAVGTHLVQVTAQDPDLGPNGSLKFDIISGN--GKGHYKLDPDSGLLVVNQS 2622
Query: 71 ---EHQGP------IQDEGGLSST-----ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
EH D G S V I V D ND +P F SV E
Sbjct: 2623 LDYEHDSKYILTIRASDGGEFSEKRRVAFTVVFITVLDENDNSPHFLFPVVNCSVLENLP 2682
Query: 117 GLA-VGRVHATDADEGQNAVVYYSV------------PEDI-PFVVDANTGDIRTNKALD 162
VHA D D G V YS+ PE F +D TGDI T + D
Sbjct: 2683 AFTHTCSVHAVDNDLGPYGQVTYSILSSCFLDYDSGSPEKKEAFAIDPLTGDIHTRQTFD 2742
Query: 163 YEKQQLY 169
YE++ Y
Sbjct: 2743 YERENEY 2749
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 65/147 (44%), Gaps = 27/147 (18%)
Query: 36 VKATDKDSGKFGLVEYRLLDN---NTDAAS-----YFNLDPAT-----------EHQGP- 75
V A D D G +G V Y +L + + D+ S F +DP T E +
Sbjct: 2690 VHAVDNDLGPYGQVTYSILSSCFLDYDSGSPEKKEAFAIDPLTGDIHTRQTFDYERENEY 2749
Query: 76 -----IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
QD+GG S+T V + + +++ +P F Y F +PE VG V A D D
Sbjct: 2750 CFVVEAQDKGGKSATVRVQVSIKGVDEFSPVFTQKQYHFLLPENSKREDVVGFVTAMDHD 2809
Query: 130 EGQNAVVYYSVPEDIPFV-VDANTGDI 155
G + +V YS+ PF ++ TG I
Sbjct: 2810 RGVDGMVEYSLTSSSPFFSINRTTGSI 2836
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 46/98 (46%), Gaps = 17/98 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPATE-------HQGPIQD 78
++ V ATD+DSG G + YRLL + D+ S F P E H
Sbjct: 2358 VLSVSATDRDSGLNGEITYRLLSSPSQGFYIQADSGSVFINKPIKEITNGNLIHLLVEAR 2417
Query: 79 EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
+GG LSS +++++V D ND P F Y +VPE
Sbjct: 2418 DGGDPALSSITSIDVQVLDTNDHVPMFHQEVYSLTVPE 2455
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 66/149 (44%), Gaps = 12/149 (8%)
Query: 26 KHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSST 85
+ L V L+QV+ ++ GK LV LD T + + A P L+S+
Sbjct: 2492 RFSLEVRLVQVENQWRNVGK--LVLCNPLDRETTESYVLTVSVADRGIPP------LNSS 2543
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V + V D ND P F S Y V E G + +V A D D G N + + +
Sbjct: 2544 AVVMVTVADCNDNAPVFSSTEYHTQVRENSAVGTHLVQVTAQDPDLGPNGSLKFDIISGN 2603
Query: 143 -DIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ +D ++G + N++LDYE Y+
Sbjct: 2604 GKGHYKLDPDSGLLVVNQSLDYEHDSKYI 2632
Score = 42.4 bits (98), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 24/152 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------EHQGPIQ--- 77
G ++++ A D D G G V Y L ++++ A F++D T + +G Q
Sbjct: 1840 GAEVLRLSAFDPDEGPNGHVTYSLTEDSSHGA--FSVDSLTGAIRTTRSLDREGRAQYTI 1897
Query: 78 --------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDA 128
G L S A V I V D+ND P P V V V A D
Sbjct: 1898 RAVATDGCTRGPLHSVAPVTILVEDVNDNVPVCDQNPINGWVSMRTLPNQIVATVTAEDG 1957
Query: 129 DEGQNAVVYYSVP-EDIPFVVDANTGDIRTNK 159
D+G+N + +++P E+ F +++ TG+I +
Sbjct: 1958 DQGENGTLLFALPDEENLFAINSETGEISLRR 1989
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPE 142
ST VNI +TDIND P F SV + G + HA D D G N V Y +
Sbjct: 850 STTQVNIAITDINDNAPVFLRTRDAISVSQNTLPGTVLFIAHAHDDDSGANGRVRYHLRN 909
Query: 143 DI--PFVVDANTGDIRTNKALDYEKQQLY 169
+ F +D + G + N++L QQ Y
Sbjct: 910 NRYGMFGIDRDLGAVTLNQSLLVSSQQSY 938
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 94 DINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDA 150
D+ND P F+S + + + G + R + D DEG N +V Y++ F ++
Sbjct: 1503 DVNDDRPVFRSAVSAQVMEDAEAGSLLHRFVSKDGDEGGNGLVSYTILTGNTKGVFTLEE 1562
Query: 151 NTGDIRTNKALDYEKQQLY 169
TG + + LDYE Q+L+
Sbjct: 1563 KTGLLFLSAPLDYEAQRLH 1581
>gi|332234728|ref|XP_003266556.1| PREDICTED: protocadherin beta-13-like [Nomascus leucogenys]
Length = 801
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 76/172 (44%), Gaps = 20/172 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY + +G +++V ATD D+G G + Y L + + + F +D T
Sbjct: 247 FYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKK 306
Query: 71 ----------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
E +D GG S TV I+V D+ND PE + +PE Q V
Sbjct: 307 QLDFEKLQSYEVNIEARDAGGFSGKCTVLIQVMDVNDHAPEVTMSAFTSPIPENQPETVV 366
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
+D D G+N + S+ ED+PF++ ++ + + T + LD E + Y
Sbjct: 367 ALFSVSDLDSGENGKISCSIQEDLPFLLKSSAENFYTLLTERPLDRESRAEY 418
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
S TA V I V D+ND PEF+ Y + E G V +V ATD D G N + YS+
Sbjct: 224 SGTAQVYIEVLDVNDNAPEFEQPFYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLF 283
Query: 141 --PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
++I F VD TG+IR K LD+EK Q Y
Sbjct: 284 QASDEISKTFKVDFLTGEIRLKKQLDFEKLQSY 316
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 85/197 (43%), Gaps = 39/197 (19%)
Query: 9 ALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL---DNNTDAASYFN 65
A TS +LF R+ + + + V ATD+DSG V Y LL D + AS +
Sbjct: 451 AFTQTSYTLF----VRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVS 506
Query: 66 LDPATEHQGPIQ-----------------DEG--GLSSTATVNIRVTDINDKNP------ 100
++ H ++ D G LSS A V + V D ND +P
Sbjct: 507 INADNGHLFALRSLDYEALQGFEFRVGASDRGSPALSSEALVRVLVLDANDNSPFVLYPL 566
Query: 101 EFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIR 156
+ S P VP G + G V +V A D D GQNA + Y + E F V A+ G++R
Sbjct: 567 QNGSAPCTELVPRGAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVR 626
Query: 157 TNKAL---DYEKQQLYL 170
T + L D K +L +
Sbjct: 627 TARLLSERDVAKHRLVV 643
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L + + + V DIND P F Y V E L +G V ATD D G NA V YS+
Sbjct: 432 LKTQLNMTVLVADINDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSL 491
Query: 141 --PED--IPFV----VDANTGDIRTNKALDYEKQQLYLERV 173
P+D +P ++A+ G + ++LDYE Q + RV
Sbjct: 492 LPPQDPHLPLASLVSINADNGHLFALRSLDYEALQGFEFRV 532
>gi|391336953|ref|XP_003742839.1| PREDICTED: protocadherin Fat 4-like [Metaseiulus occidentalis]
Length = 2971
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 82/171 (47%), Gaps = 25/171 (14%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN------------LD 67
G K LGV ++A D+D GK G V+Y LL + + LD
Sbjct: 2245 GNYRETKRRLGV----LRAVDEDKGKNGAVDYALLVRKDEQLPFHIDVHTGELFATGILD 2300
Query: 68 PATEHQGPIQ----DEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQD-GLAV 120
T+ + Q D G + +TVN+ + D+ND+ P+F + PY VPE D G V
Sbjct: 2301 RETKDKYLFQVLALDNGEVPQNSTVNVTIVIDDVNDEKPKFFTDPYLAQVPENMDPGQKV 2360
Query: 121 GRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ A D D G+N +V+Y + D F +D+ G + T LD+E+Q+ Y
Sbjct: 2361 TQIRAFDPDAGENGLVFYKLGGGHDNRFYIDSKDGTVWTLSKLDFEQQEFY 2411
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 7/106 (6%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG---QDGLAVGRVHATDADEGQNA 134
D GLS+ VNI V D+ND P F Y F++ EG + +G + A D D+G+N
Sbjct: 2209 DGKGLSNVIQVNITVLDVNDHKPTFVKSEYNFNIEEGNYRETKRRLGVLRAVDEDKGKNG 2268
Query: 135 VVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
V Y++ E +PF +D +TG++ LD E + YL +V +
Sbjct: 2269 AVDYALLVRKDEQLPFHIDVHTGELFATGILDRETKDKYLFQVLAL 2314
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 20/158 (12%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLL----------DNNTDAASYFNLDPATEHQGP---IQD 78
T+ +KA D+DSG ++Y +L D++ + + LD E + I
Sbjct: 366 TVGTIKAIDRDSGVNAEIQYIILGDQANDAFVVDDDGNIVTRRRLDREVEGKTEFLVIAY 425
Query: 79 EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNA 134
+GG LS T TV + V DIND P F+ + ++PE D V ++ A D D+G NA
Sbjct: 426 DGGVPQLSGTTTVAVSVEDINDNPPYFEGDTFFVNIPEEVDPPKEVYKLEAKDVDQGDNA 485
Query: 135 VVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V+ Y + E+ F ++ +TG + T K LDYE + Y
Sbjct: 486 VMKYRIIGGNEEKNFEINEDTGVVYTTKKLDYETKPEY 523
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 29/165 (17%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------------- 70
+ G +++Q+ A D D+ G + Y + + + F +DP T
Sbjct: 1091 QAGRSVIQLHAVDLDTANNGEITYWIKNTH----GIFEIDPKTGLVRLASSLLNARRGNN 1146
Query: 71 ---EHQGPIQDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHA 125
E + QD G S+ + + +RV++ + P F+ Y V E + + +VHA
Sbjct: 1147 ASFEMEVFAQDHGATSNIGRSMLFVRVSNTLNHPPVFERFAYSVFVDENAANVPLVQVHA 1206
Query: 126 TDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQ 167
+D DEG++ V+Y + F +D +G I +ALDYEK +
Sbjct: 1207 SDQDEGRSGKVFYRIVRSSMKGAFKIDETSGKITLVQALDYEKTK 1251
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV- 140
++ A V+I VTD+N+ PEF PYE V E G V +V A D D N+++ YS
Sbjct: 229 TAVAVVHIDVTDVNNNVPEFVDAPYEAHVGESLPAGALVTQVKAKDLD--ANSLLQYSFI 286
Query: 141 --PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+D F +D ++G I T + LD+EK+Q Y
Sbjct: 287 AGNDDELFRIDTHSGTISTLQVLDFEKKQAY 317
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 33/167 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF-------------NLDPATE-HQGP 75
G ++ ++ATD+D K + Y L + +TD +F NL+ T H
Sbjct: 787 GTSVGNIQATDRDGDK---ITYTLAEGDTD---FFGIERDHGRVFVKKNLESRTHFHFVA 840
Query: 76 IQDEGGLSSTATVNIRVT----DINDKNPEFQSLPYEFSVPE--GQDGLAVGRVHATDAD 129
+ + G S ++ ++VT ++N+ P F YE SV E D + + R+HATD D
Sbjct: 841 VATDDGAPSNRSLGVKVTIYVREVNNHPPVFSHQSYEGSVLEKFATDRVVI-RLHATDLD 899
Query: 130 EGQNAVVY--YSVPEDIPFVVDANTGDIRTN----KALDYEKQQLYL 170
N + Y S ED F++D TG+IR N LDY++++ Y+
Sbjct: 900 LQNNTITYDITSGNEDQVFMIDPVTGEIRVNPDNVHLLDYDRKKSYI 946
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 74/172 (43%), Gaps = 28/172 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL---LDN-----------------NT 58
Y A + + G + Q++A D D+G+ GLV Y+L DN +
Sbjct: 2346 YLAQVPENMDPGQKVTQIRAFDPDAGENGLVFYKLGGGHDNRFYIDSKDGTVWTLSKLDF 2405
Query: 59 DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
+ ++N+ QG + LS+TA + + VTD ND P+F Y V E
Sbjct: 2406 EQQEFYNMTVIAYDQG----KPSLSATAKLWVTVTDRNDVIPDFAKSVYTLEVAENT--- 2458
Query: 119 AVGRVHAT-DADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
VG V T DA G + ED F V+ NTG+IR K LD + Y
Sbjct: 2459 KVGDVVFTLDAGSGNFHYSLVTSDEDNTFTVEPNTGEIRLAKPLDSAQHSHY 2510
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 76/182 (41%), Gaps = 38/182 (20%)
Query: 7 PSALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL 66
P E + S+F D++ V L+QV A+D+D G+ G V YR++ ++ A F +
Sbjct: 1180 PPVFERFAYSVFV-----DENAANVPLVQVHASDQDEGRSGKVFYRIVRSSMKGA--FKI 1232
Query: 67 DPATEHQGPIQDEGGLS----------------------STATVNIRVTDINDKNPEFQS 104
D E G I L +T V + V D+ND PEF S
Sbjct: 1233 D---ETSGKITLVQALDYEKTKHLEIFVEARDDAKEQQYATTVVQVTVNDVNDNAPEFLS 1289
Query: 105 LPYEFSVP--EGQDGLAVGRVHATDAD---EGQNAVVYYSVPEDIPFVVDANTGDIRTNK 159
LP VP Q+ + V +V A D D G N + + P + F + TG I +
Sbjct: 1290 LPRVLRVPVSTAQNEI-VYKVQAQDLDSSMSGNNEIKFELNPPSLRFSIHPKTGQIFATQ 1348
Query: 160 AL 161
L
Sbjct: 1349 PL 1350
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 72/169 (42%), Gaps = 31/169 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y A + G + QVKA D D+ L++Y + N D F +D H G I
Sbjct: 253 YEAHVGESLPAGALVTQVKAKDLDAN--SLLQYSFIAGNDD--ELFRID---THSGTIST 305
Query: 78 ------------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGL 118
+G ++ A + + V DIND+ P F Y F+V E +
Sbjct: 306 LQVLDFEKKQAYDLLVQVSDGFNTAVAPLTVHVVDINDQQPVFTHNYYNFTVVEEMPENT 365
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYE 164
VG + A D D G NA + Y + D FVVD + G+I T + LD E
Sbjct: 366 TVGTIKAIDRDSGVNAEIQYIILGDQANDAFVVD-DDGNIVTRRRLDRE 413
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 72/172 (41%), Gaps = 20/172 (11%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA------TEHQGP------- 75
+G + VKATD D+ + YR N D F +DP T H
Sbjct: 1834 IGTVVETVKATDPDTAANTRMRYRFAGN--DPTIPFEIDPVSGAINVTRHLDISESQEYT 1891
Query: 76 ---IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQ 132
+ +G + AT+ I V + +++P F Y+FSV E G VG+V
Sbjct: 1892 LTLVASDGKWDAQATMKIYVHEAEERDPRFNQNTYKFSVLENVAGAVVGQVELQSKKTRA 1951
Query: 133 NAVVYYS-VPEDIPFVVD-ANTGDIRTNKALDYEKQQLYLERVFLISKFATS 182
N+ + YS V D+ + + G+I T LD EK+ Y V L + T+
Sbjct: 1952 NSQMRYSIVNTDVRTLFNITKDGEIYTKVGLDREKRSKYTFTVMLEERRPTT 2003
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 77/172 (44%), Gaps = 30/172 (17%)
Query: 11 EMTSDSLFYGAMARDKHELGVTLM---QVKATDKDSGKFGLVEYRL----------LDNN 57
E+ + S Y + ++ G T+ Q+ A D D+G ++ Y L LDN
Sbjct: 2020 EIPTFSQSYQGVIKENSPPGTTVTIKPQIHAVDNDAGNNSILAYSLGGPGSELFSILDNG 2079
Query: 58 T------DAASYFNLDPATEHQGPI--QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF 109
S N + +++ + +D G LSS+ + I+V D ND P FQ P +
Sbjct: 2080 AVIFTGGSPISTLNRELTDKYELLVTARDLGNLSSSTYLTIKVEDENDNAPVFQHGPLKV 2139
Query: 110 SVPE-GQDGLAVGRVHATDADE-GQNAVVYYSVPEDIPFVVDANTGDIRTNK 159
+PE + G V +V A D DE G N+ V YS+ TG+IR ++
Sbjct: 2140 LLPETARPGARVAQVQAIDIDEKGSNSKVDYSITA-------GGTGNIRIDR 2184
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV 140
L + V I V D ND P F Y S+PE G + AT D + + Y +
Sbjct: 959 LIGLSMVTINVIDSNDHPPVFSKTAYSASLPENLPAGHCFLHISATSGD-SVDHLNYKIL 1017
Query: 141 PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+DIPF ++A TGDI T K LD E + Y
Sbjct: 1018 NKDIPFTINAKTGDICTAKVLDRELKDSY 1046
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDAD 129
+ +AT+ I V +IN+ NPEF LPY F V E G +VG + ATD D
Sbjct: 752 TGSATIVISVQNINEYNPEFVGLPYNFQVAENAAQGTSVGNIQATDRD 799
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 59/147 (40%), Gaps = 20/147 (13%)
Query: 27 HELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTA 86
+E G L V D+D K D A +F + A + P + + T
Sbjct: 1760 NEHGALLKVVSELDRDKYKVD-----------DTALHFVIVAARDMGTPSR-----TGTT 1803
Query: 87 TVNIRVTDINDKNPEFQSLP-YEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPED-- 143
TV + + D+ND P F+ Y+F G V V ATD D N + Y +
Sbjct: 1804 TVAVVIHDVNDSPPSFEREAYYQFISESAPIGTVVETVKATDPDTAANTRMRYRFAGNDP 1863
Query: 144 -IPFVVDANTGDIRTNKALDYEKQQLY 169
IPF +D +G I + LD + Q Y
Sbjct: 1864 TIPFEIDPVSGAINVTRHLDISESQEY 1890
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNAVV 136
++G + +++ +TD ND P+F+ Y ++P + Q G +V ++HA D D N +
Sbjct: 1053 EDGKFDAKVPISVEITDENDNPPKFEKERYVVTIPTDSQAGRSVIQLHAVDLDTANNGEI 1112
Query: 137 YYSVPEDIP-FVVDANTGDIRTNKAL 161
Y + F +D TG +R +L
Sbjct: 1113 TYWIKNTHGIFEIDPKTGLVRLASSL 1138
Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Query: 88 VNIRVTDINDKNPEFQ--SLPYEFSVP-EGQDGLAVGRVHATDADEGQNAVVYYSV---P 141
V+I+V D ND +P F+ P +VP E G V RV A DAD G N + Y +
Sbjct: 2657 VSIKVGDENDNSPVFEHGGKPIVAAVPLEASFGYQVARVQARDADTGTNGNIRYEIVQRS 2716
Query: 142 EDI--PFVVDANTGDIRTNKALDYEKQQLY 169
ED F VD TG IR+ + ++Y
Sbjct: 2717 EDASSKFQVDPITGVIRSVVTFSLDGGKMY 2746
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 66/159 (41%), Gaps = 38/159 (23%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL--------LDNNTDAASYFNLDPAT----------- 70
G T++QV A DKDSG+ Y L +D+ T A S DPA
Sbjct: 42 GFTVVQVNAVDKDSGENADFVYHLIDESGGFSIDDKTGAISV--RDPAKLDREKTDKVIM 99
Query: 71 -----EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLP---YEFSVPEGQ-DGLAVG 121
E + + + S+T + + + D ND NP+F +P Y F V E G +G
Sbjct: 100 KVLALERKPNVLPDAKASATEVI-VYLLDANDNNPKF--VPEGVYTFRVTETDPAGTVIG 156
Query: 122 RVHATDADEGQNAVVYY-----SVPEDIPFVVDANTGDI 155
V A D D G N V + ++ +PF V G +
Sbjct: 157 SVVAIDPDMGDNGKVVFFKQNDTLSHGVPFDVHPLNGSV 195
>gi|444721940|gb|ELW62647.1| Protocadherin Fat 4 [Tupaia chinensis]
Length = 2300
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F +DP + E +
Sbjct: 1717 GSKIMQLTAMDADEGANALVTYTIISGADDS---FRIDPESGDLIATKRLDRERRSKYSL 1773
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G SS +NI V+D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1774 LVRADDGLQSSDMRINITVSDVNDHTPKFSRPVYSFDIPEDTTPGSLVAAILATDDDSGV 1833
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG + LDYE QQ Y+ V
Sbjct: 1834 NGEITYIVNEDDEDGIFFLNPVTGVFNLTRVLDYEAQQYYILTV 1877
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +ATD DSG +EY LL + S +D G + D
Sbjct: 2028 VFKAQATDPDSGPNSYIEYPLLTPLGNKFSIGTIDGEVRLTGELDREEVSTYSLTVVATD 2087
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ V +RV DIND NP F Y+ + E G + +V A D DEG N
Sbjct: 2088 KGQPALSSSTEVVVRVLDINDNNPVFAQALYKVEINENTLTGTDIIQVLAADGDEGTNGQ 2147
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V Y + E + F +D+ TG I K LD EK YL V
Sbjct: 2148 VRYGIVEGNANQEFRIDSVTGTITVAKPLDREKTPTYLLTV 2188
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 23/173 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-- 76
Y + G L+ ++ATD D G G V + L + D S F LDP + I
Sbjct: 549 YNVSVVENSPTGTELLVLRATDGDLGDNGTVRFSLQEAEADQRS-FRLDPVSGRLSTISS 607
Query: 77 --QDEGGL---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
++E SS A +N+ + D+ND +P F + Y + E + G +
Sbjct: 608 LDREEQAFYSLLVLATDLGSPPQSSVARINVSLLDVNDNSPVFYPVQYFAHIQENEPGGS 667
Query: 120 -VGRVHATDADEGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ V ATD D G N V YS+ + F V+A +G I T ALD E++ Y
Sbjct: 668 YITTVSATDPDLGPNGTVKYSLSAGDRSRFQVNAQSGVISTKMALDREEKTAY 720
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 73/169 (43%), Gaps = 18/169 (10%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF---NLDPAT 70
D L Y + + QV+A+DKDSG G + Y + + NT DA F L +
Sbjct: 958 DQLSYEVTLSESEPVNSRFFQVQASDKDSGANGEISYTIAEGNTGDAFGIFPDGQLYIKS 1017
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E +QD LS+T V + + D+ND P F S Y F E Q G
Sbjct: 1018 ELDRELQDRYVLVVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAG 1077
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
VG+V+A D D G N V YS P F + A +G+I D E
Sbjct: 1078 SFVGKVNAIDKDFGPNGEVRYSFEMVQPDFELHAVSGEITNTHQFDRES 1126
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L ATV++ + DIND P+F Y+ ++ E L V RV A+D DEG N +++YSV
Sbjct: 1151 LKDQATVHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGSNGLIHYSV 1210
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E+ F +D+N+G + LDYE Y
Sbjct: 1211 IKGNEERQFAIDSNSGQVTLIGTLDYEATPAY 1242
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVP-EDIP 145
VN+ V DIND P F S Y+ VPE G +V +V A DADEG NA + Y + E P
Sbjct: 197 VNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAADADEGTNADIRYRLQDEGTP 256
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +D TG I + LD+E ++ Y
Sbjct: 257 FQMDPETGLITVREPLDFEARRQY 280
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 27/165 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGPI--- 76
G ++QV A D D G G V Y +++ N A F +D P + P
Sbjct: 2129 GTDIIQVLAADGDEGTNGQVRYGIVEGN--ANQEFRIDSVTGTITVAKPLDREKTPTYLL 2186
Query: 77 ----QDEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDA 128
D G + T+TV+I + DIND P F+ PY +VPE + L + +V A D
Sbjct: 2187 TVQATDRGSTPRTDTSTVSIVLLDINDFVPIFELSPYSVTVPENLETLPKTILQVVARDD 2246
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D+G N+ + Y + ED F++ AN G++ ++LD E ++ ++
Sbjct: 2247 DQGSNSKLSYVLLGGNEDNAFILSAN-GELSVTQSLDRETKERFV 2290
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 74/175 (42%), Gaps = 25/175 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD---------- 67
FY A + +++V A+D D G GL+ Y ++ N + F +D
Sbjct: 1175 FYQATISESAANLTQVLRVSASDVDEGSNGLIHYSVIKGNEE--RQFAIDSNSGQVTLIG 1232
Query: 68 -------PATEHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
PA D G L+ST T++I + D ND P F V E + G
Sbjct: 1233 TLDYEATPAYSLVIQAVDSGTVSLNSTCTLSIDILDENDNTPSFPKSTLFVDVLENMRIG 1292
Query: 118 LAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD+D G NA + YS+ F + NTG I K LD+E Q LY
Sbjct: 1293 ELVSSVTATDSDSGDNADLQYSITGTNNHGTFSISPNTGSIFLAKKLDFETQSLY 1347
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1685 AEVEITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTYTIISGA 1744
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ K LD E++ Y
Sbjct: 1745 DDSFRIDPESGDLIATKRLDRERRSKY 1771
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 63/146 (43%), Gaps = 23/146 (15%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPATEHQGPIQ 77
+ + G ++ Q KA D D G G+V Y L N N + L P H G Q
Sbjct: 865 ENWQAGHSIFQAKAVDPDEGVNGMVLYSLRQNPKNLFAINEKNGNISLLGPLDVHVGSYQ 924
Query: 78 DE-----GGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
E G+ SS+ + + V D+ND P F L YE ++ E + +V A+D
Sbjct: 925 IEILASDMGVPQRSSSVILTVYVHDVNDNPPVFDQLSYEVTLSESEPVNSRFFQVQASDK 984
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD 154
D G N + Y++ E NTGD
Sbjct: 985 DSGANGEISYTIAE-------GNTGD 1003
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 70/159 (44%), Gaps = 20/159 (12%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY-------FNLDPATEHQGP------- 75
G + + ATD DSG G + Y + +++ D + FNL +++
Sbjct: 1818 GSLVAAILATDDDSGVNGEITYIVNEDDEDGIFFLNPVTGVFNLTRVLDYEAQQYYILTV 1877
Query: 76 -IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
+D GG +T V + D+ND P F Y S+ E G V + TDAD+G N
Sbjct: 1878 RAEDGGGQFTTIRVYFNILDVNDNPPVFSLNSYSTSLMENLPLGSTVLVFNVTDADDGIN 1937
Query: 134 AVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ + YS+ F VD G ++ KALD E Q Y
Sbjct: 1938 SQLAYSIASGDSLEQFTVD-QKGVLKVLKALDRESQSFY 1975
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
G ++ VNI V D+ND +P F Q++ V Q G ++ + A D DEG N +V Y
Sbjct: 832 GTVAGDTVVNITVKDLNDNSPHFLQAVESVNVVENWQAGHSIFQAKAVDPDEGVNGMVLY 891
Query: 139 SV---PEDIPFVVDANTGDIRTNKALD 162
S+ P+++ F ++ G+I LD
Sbjct: 892 SLRQNPKNL-FAINEKNGNISLLGPLD 917
Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 69/169 (40%), Gaps = 26/169 (15%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQ 73
+ +G + V ATD DSG ++Y + N F++ P T E Q
Sbjct: 1287 ENMRIGELVSSVTATDSDSGDNADLQYSITGTNNHGT--FSISPNTGSIFLAKKLDFETQ 1344
Query: 74 G------PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVH 124
+D+G SST +V I V D ND P F S+ E G +V V
Sbjct: 1345 SLYKLNITAKDKGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVT 1404
Query: 125 ATDADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
A D D N + Y++ + +P F +D G I TN +D E L+
Sbjct: 1405 AHDPDADINGQLSYTIIQQMPRGNHFGIDQVKGTIYTNAEIDREFANLF 1453
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 67/174 (38%), Gaps = 20/174 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G V+Y L + ++ LD
Sbjct: 655 YFAHIQENEPGGSYITTVSATDPDLGPNGTVKYSLSAGDRSRFQVNAQSGVISTKMALDR 714
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V I V D D P F Y F V E G VG
Sbjct: 715 EEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAYSFVVFENVALGYHVG 774
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A+ D N + Y D F ++ TG + T +D E+Q Y +V
Sbjct: 775 SVSASSMDLNSN-ISYLITTGDQKGMFAINQVTGQLTTASVIDREEQSFYQLKV 827
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N V Y + +
Sbjct: 1476 VTILVTDLNDNVPMFISQNALAADPSAVIGSILTTIMAADPDEGANGEVEYEIVNGDTDT 1535
Query: 146 FVVDANTGDIRTNKAL 161
F++D +GD+R AL
Sbjct: 1536 FIMDRYSGDLRVASAL 1551
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS 139
+STA V+I + D+ND P F S P +PE V + ATD D G N+ + Y
Sbjct: 1989 AFTSTAQVSIILLDVNDNPPTFLS-PKLTYIPENTPIDTVVFKAQATDPDSGPNSYIEYP 2047
Query: 140 V--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ P F + G++R LD E+ Y
Sbjct: 2048 LLTPLGNKFSIGTIDGEVRLTGELDREEVSTY 2079
Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNAVVYYSV 140
SS A++ I V DIND P F Y ++ E G V V ATD D G NA + YS+
Sbjct: 417 SSVASLVIFVNDINDHPPVFAQQVYRVNLSEEAPPGSYVCGVSATDGDSGLNANLRYSI 475
>gi|363739133|ref|XP_414584.3| PREDICTED: protocadherin Fat 2 [Gallus gallus]
Length = 4403
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 68/144 (47%), Gaps = 20/144 (13%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI 76
+ Y A + ++Q+ A+DKDSG+ +V Y++LD+ +DA +FN+D +T
Sbjct: 2282 MIYTASVSESMPAHTPVVQIIASDKDSGRNKVVSYQILDDGSDATKFFNIDASTGQITTA 2341
Query: 77 Q-----------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQD 116
Q D G LSS A V + VTDIND PEF L YE V E
Sbjct: 2342 QALDYEKTQQFRMKVRAADHGTPPLSSDALVIVNVTDINDNPPEFSQLQYEAKVSEMATC 2401
Query: 117 GLAVGRVHATDADEGQNAVVYYSV 140
G V +V A D D G + Y +
Sbjct: 2402 GHIVLKVQALDPDSGDTTRLEYVI 2425
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE 142
S ATV + V D+ND P+F+++PY SV +G + G + +V ATD D G NA + YS E
Sbjct: 2059 SQATVKVYVEDVNDNPPQFENVPYYTSVQDGMEPGDVLFQVSATDKDIGNNAAITYSFAE 2118
Query: 143 DIP-FVVDANTGDIRTNKALDYEKQQLYLERVF 174
D F +D GDI K LDY Y RV
Sbjct: 2119 DYKYFWIDPYLGDISLKKPLDYHALNKYSLRVI 2151
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVP- 141
++ATV I + D N+ P F Y + E G +V V ATD DEG N V Y++
Sbjct: 443 TSATVVIDIIDCNNHAPSFSQSSYRGAFDENAPPGTSVLTVRATDEDEGDNGFVTYTIAN 502
Query: 142 -EDIPFVVDANTGDIRTNKALDYE-KQQLYLERVF 174
+ +PFV+D +G I T+K+LDYE Q+ Y RV+
Sbjct: 503 QKSVPFVIDPYSGIISTSKSLDYELMQRWYHLRVW 537
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG-LAVGRVHATDADEGQNAVVYYS 139
G S A V + V DIND P F + Y SV E V ++ A+D D G+N VV Y
Sbjct: 2258 GSFSEARVEVEVEDINDNPPVFSEMIYTASVSESMPAHTPVVQIIASDKDSGRNKVVSYQ 2317
Query: 140 VPEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ +D F +DA+TG I T +ALDYEK Q + +V
Sbjct: 2318 ILDDGSDATKFFNIDASTGQITTAQALDYEKTQQFRMKV 2356
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 78/166 (46%), Gaps = 24/166 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL----------DNNTDAASYFNLDP 68
Y A + E+G ++++ A D D G +G ++Y ++ DN + LD
Sbjct: 2493 YEAELAENAEVGTKVIELLAIDPDGGPYGTIDYTIINKLADEKFSIDNKGHITTLQKLDR 2552
Query: 69 ATEHQGPI------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVG 121
+ I +D GG + TV I +TD ND P+F++ Y S+ G V
Sbjct: 2553 ENSTERVIAIKVMAKDGGGKVAFCTVKIILTDENDNPPQFKASEYTLSIQSNVSKGSPVI 2612
Query: 122 RVHATDADEGQNAVVYYS------VPEDIPFVVDANTGDIRTNKAL 161
+V A DADEG NA V YS V EDI ++A TG ++ ++L
Sbjct: 2613 QVLAYDADEGANADVVYSVDSVEDVSEDI-VEINAATGVVKVKESL 2657
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
E L S +VNI+V DIND P F++ PY+ V E G V +V A D D G +
Sbjct: 2780 HQETELVSLVSVNIQVQDINDNKPVFEADPYKAFVMENMPSGTTVIQVTANDQDTGSDGQ 2839
Query: 136 VYYSVPEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
V YS+ + F +D TG I T K LD E Q+ Y R ++++
Sbjct: 2840 VTYSLEAESGKLRGLFTIDGETGWITTLKELDCETQETY--RFYVVA 2884
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 80/178 (44%), Gaps = 40/178 (22%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSS----- 84
G ++QV ATDKD GK GL+ + + F LDP++ G + G SS
Sbjct: 1472 GREILQVSATDKDKGK-GLIYTIHGSMDPRSTRLFQLDPSS---GVLTTAEGFSSQPMPQ 1527
Query: 85 -TATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGLAVG----RV 123
T TV +R V + N P+F S+ YE E D AVG +V
Sbjct: 1528 HTLTVMVRDQEVPIKRNFVRVIIHVENCNLHPPQFSSIHYE---AETLDSAAVGTEIVQV 1584
Query: 124 HATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
A D D+G NA ++YS+ + F +D ++G I + LD KQ ER LI K
Sbjct: 1585 RALDQDQGANAEIHYSLQAGNGEGFFSIDPHSGIITVAQKLDPSKQ----ERFTLIVK 1638
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 74/172 (43%), Gaps = 21/172 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---------NNTDAASYFN--LD 67
Y AM ++ +G ++ + A +D+ + ++Y +++ N+ A Y N LD
Sbjct: 3230 YVAMVKEDVAVGTEVLNLSALTRDNTENTEIKYEIVNGNDHGKFQLNSNTGALYINGSLD 3289
Query: 68 PATEHQGPIQDEG------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAV 120
H+ + EG LS V I +TDIND PEF PY + E G +
Sbjct: 3290 FEASHEYYLSIEGTRKGSASLSDVTMVVINITDINDHAPEFIQDPYFADIREDAAVGEII 3349
Query: 121 GRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
V A D D N + YS+ E P F + +G I K LD E+ Y
Sbjct: 3350 LTVSADDLDGAMNNQITYSIVEGNPLGHFAIQPKSGQISIAKHLDREEISSY 3401
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 23/153 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL--------------DPATEH--QGP 75
+++Q+ A D DS G + + +L N NL + EH +
Sbjct: 1157 SVLQLDALDPDSSSEGKLTFHILTGNPQGLFAINLVTGLISTTSRQLDREYKAEHILEVA 1216
Query: 76 IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE---GQDGLAVGRVHATDADE 130
+ D G L ST+ V I+V D ND P F + +PE + L V R+ A+D D+
Sbjct: 1217 VSDNGDPALKSTSRVVIQVLDANDNPPSFPHKLFMVQLPEREASETPLPVYRLIASDRDQ 1276
Query: 131 GQNAVVYYSVPEDIP--FVVDANTGDIRTNKAL 161
GQN+ V Y++ E+ F ++ TG + + KA
Sbjct: 1277 GQNSQVTYTIEEEEEGIFTINPTTGMVLSRKAF 1309
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 76/187 (40%), Gaps = 35/187 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + G T++QV A D+D+G G V Y L + F +D
Sbjct: 2810 YKAFVMENMPSGTTVIQVTANDQDTGSDGQVTYSLEAESGKLRGLFTIDGETGWITTLKE 2869
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
AT+H +Q LSS V + V+D ND P+F S Y+ SV E
Sbjct: 2870 LDCETQETYRFYVVATDHGRKVQ----LSSQTLVEVTVSDENDNAPQFTSDFYKGSVIEN 2925
Query: 114 GQDGLAVGRVHATDAD--EGQNAVVYYSVPEDI--PFVVDANTGD--IRTNKALDYEKQQ 167
+ G + + DAD E V Y D+ F VD G+ I + K LD E +
Sbjct: 2926 AEPGQVIVTLSTIDADISEQNRRVTCYITEGDVLGQFTVDQIEGEWTISSKKPLDREDTE 2985
Query: 168 LYLERVF 174
YL +V
Sbjct: 2986 KYLLKVM 2992
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVY 137
+G +T V I V DIND +PE + Y V E Q G + ++ ATD D G NA +
Sbjct: 2995 DGKFQATTEVEIFVLDINDNSPECGQIFYTGRVSEDAQPGHFILKISATDPDVGSNAQIT 3054
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
YS+ P F + +TG++ T+ LD E++ Y
Sbjct: 3055 YSLHGPGAEEFRLGPHTGELTTSAPLDREQKPTY 3088
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 65/167 (38%), Gaps = 27/167 (16%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------ 70
+FY + + G ++++ ATD D G + Y L + A F L P T
Sbjct: 3021 IFYTGRVSEDAQPGHFILKISATDPDVGSNAQITYSL---HGPGAEEFRLGPHTGELTTS 3077
Query: 71 ----EHQGPI-------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP---EGQD 116
Q P D GG S A + + + D ND P F P +V
Sbjct: 3078 APLDREQKPTYHLVAKATDGGGRSCQADITLTIEDTNDNAPRF--FPSHCAVAVFDNTTT 3135
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKAL 161
+ V A D DEG NA V YS+ + F ++ TG IR K L
Sbjct: 3136 KTPIAVVSARDLDEGLNAEVVYSLSDSANGHFSIEETTGVIRLEKPL 3182
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 68/166 (40%), Gaps = 29/166 (17%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAA---------------------SYFNLDPAT 70
T+ + A D D+G G + Y + D N D+ S++ L+
Sbjct: 735 TIADLSAVDPDTGFNGKLVYVISDGNVDSCFTIDLELGLLQILSPLDHERTSFYILNITV 794
Query: 71 EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
G Q SS + + V D ND P F Y ++PE G + ++ A DAD
Sbjct: 795 YDLGTPQK----SSWKLLAVNVLDTNDNTPRFPQGAYWVAIPENVVTGTTIAQLKAEDAD 850
Query: 130 EGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
N V YS+ P D F +++ TG++ ALD E Y ++
Sbjct: 851 TDDNGRVKYSLLTPTD-KFAINSVTGEVTVIGALDRELWPYYALKI 895
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 75/183 (40%), Gaps = 24/183 (13%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN----------TDAASYFN- 65
L Y A + G +++V+A D DSG +EY +L N + S FN
Sbjct: 2389 LQYEAKVSEMATCGHIVLKVQALDPDSGDTTRLEYVILSGNDHRHFTINSTSGIISMFNR 2448
Query: 66 ----LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAV 120
L+ + + D G ST V I T+ N +P FQ YE + E + G V
Sbjct: 2449 CKKDLESSYSLRVSASD-GVFKSTVPVYINTTNANKYSPSFQQNTYEAELAENAEVGTKV 2507
Query: 121 GRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
+ A D D G + Y++ D F +D N G I T + LD E ERV I
Sbjct: 2508 IELLAIDPDGGPYGTIDYTIINKLADEKFSID-NKGHITTLQKLDRENST---ERVIAIK 2563
Query: 178 KFA 180
A
Sbjct: 2564 VMA 2566
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 68/171 (39%), Gaps = 42/171 (24%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA-------------------SYFNL---- 66
G T+ Q+KA D D+ G V+Y LL A Y+ L
Sbjct: 838 GTTIAQLKAEDADTDDNGRVKYSLLTPTDKFAINSVTGEVTVIGALDRELWPYYALKIKA 897
Query: 67 --DPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRV- 123
P T +Q L S + + + D+ND +P VPE L VG +
Sbjct: 898 RDQPKTGYQ--------LFSVTDLIVTLEDVNDNDPHCLPALNNVKVPE---DLPVGTIL 946
Query: 124 ---HATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D G V YS+ E++ F +D TG +R K LDYEK+ Y
Sbjct: 947 LFLEAFDPDAGSGGEVRYSLVNDEEMMFHIDKLTGALRLEKELDYEKKDSY 997
Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 76/174 (43%), Gaps = 29/174 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP-- 75
+G L+ ++A D D+G G V Y L++ D F++D T E +
Sbjct: 942 VGTILLFLEAFDPDAGSGGEVRYSLVN---DEEMMFHIDKLTGALRLEKELDYEKKDSYN 998
Query: 76 ----IQDEG---GLSSTATVNIRVTDINDK--NPEFQSLPYEFSVPEGQ-DGLAVGRVHA 125
++D G SS + + V D+N+ P F S ++ V E +G +V V A
Sbjct: 999 LTVQVRDSGKPVSRSSLCHLEVNVLDVNENLYPPRFASFVFKGWVQENSPEGTSVMMVTA 1058
Query: 126 TDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
D D+G++ V Y + E F ++ +TG IRT LD E Y V +
Sbjct: 1059 KDIDKGKDGEVQYFLREGTGLSVFSIEKDTGTIRTIGPLDREGTSHYWLTVLAL 1112
Score = 42.7 bits (99), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 78/183 (42%), Gaps = 34/183 (18%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
S+ Y A D +G ++QV+A D+D G + Y L N + +F++DP H G
Sbjct: 1564 SIHYEAETLDSAAVGTEIVQVRALDQDQGANAEIHYSLQAGNGEG--FFSIDP---HSGI 1618
Query: 76 I--------------------QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
I +D+G L +ATV+IR+ + P+F Y + E
Sbjct: 1619 ITVAQKLDPSKQERFTLIVKAEDQGFPQLKDSATVHIRIRPSDQTPPKFPEAEY---ITE 1675
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ AVG ++ V Y + + D F ++ +G I T K LD+E+ Y
Sbjct: 1676 ISESAAVGS-PLIQVSTSSSSPVSYEIKDGNGDGVFSMNYQSGLISTQKNLDFEQVSFYQ 1734
Query: 171 ERV 173
+V
Sbjct: 1735 LKV 1737
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 74/182 (40%), Gaps = 26/182 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EH 72
S + ++ G ++M V A D D GK G V+Y L + S F+++ T
Sbjct: 1036 SFVFKGWVQENSPEGTSVMMVTAKDIDKGKDGEVQYFLREGT--GLSVFSIEKDTGTIRT 1093
Query: 73 QGPIQDEGG----------------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ- 115
GP+ EG LSS + I VTD ND P+ Y SV E
Sbjct: 1094 IGPLDREGTSHYWLTVLALDLGTVPLSSATEIYIEVTDTNDNPPQMSRPVYYASVMENSP 1153
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIR-TNKALDYEKQQLYLE 171
+V ++ A D D + + + P F ++ TG I T++ LD E + ++
Sbjct: 1154 PNTSVLQLDALDPDSSSEGKLTFHILTGNPQGLFAINLVTGLISTTSRQLDREYKAEHIL 1213
Query: 172 RV 173
V
Sbjct: 1214 EV 1215
Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 63/167 (37%), Gaps = 24/167 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA---TEHQGP 75
Y +D E G L QV ATDKD G + Y ++ YF +DP + P
Sbjct: 2082 YYTSVQDGMEPGDVLFQVSATDKDIGNNAAITYSFAED----YKYFWIDPYLGDISLKKP 2137
Query: 76 I--------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVG 121
+ +D G A + ++ N NP FQSL Y VPE
Sbjct: 2138 LDYHALNKYSLRVIAKDNGEPPLLAEEEVVISVRNKSNPLFQSLYYRVKVPENIPPYTSI 2197
Query: 122 RVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQ 166
+ EG ++Y V ED F D TG + LDYE Q
Sbjct: 2198 LHIQARSPEGLR-LIYNIVEEDSLKLFSTDFKTGVLTVTGQLDYELQ 2243
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV--PE 142
A V I + D ND P F Y+ S+ E V + ATDAD GQNA YY++
Sbjct: 135 AKVLIHILDRNDLKPLFSPPSYKVSIREDTPLKTVVSTLSATDADAGQNAEFYYALNTKS 194
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKF 179
D+ F + TG + T L+ + + +V + +
Sbjct: 195 DL-FTIHPTTGAVVTTGRLNSTHRGRHHLQVLAVDRM 230
Score = 36.2 bits (82), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 26/170 (15%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGL-VEYRLLDNNTDAA------------SY 63
L Y + ++ +G +++++ +D+DS + G +++ N A S
Sbjct: 3438 LNYSVVVQENAPVGTSVLELIMSDRDSPENGPPYSFQITQGNDGKAFDVTQNGLLVTSSI 3497
Query: 64 FNLDPATEH--QGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD--- 116
N ++ Q + D G LSS+A VNI+VT+ + P +LP E + ++
Sbjct: 3498 LNRRVKEQYLLQVQVSDSGIPPLSSSAFVNIQVTEQSQYAP--SALPLEIFITTNEEAFR 3555
Query: 117 GLAVGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDY 163
G +G++HATD D + +VY VP++ F + A G I L +
Sbjct: 3556 GGVLGKIHATDRDP-HDTLVYTLVAEVPQEGRFSIGAADGKIIAGNKLPH 3604
Score = 35.4 bits (80), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 124 HATDADEGQNAVVYYSV--PEDIP-FVVDANTGDIRTNKALDYE 164
HATDAD+ NA++ Y + PE + F VD +TG + + +DYE
Sbjct: 1795 HATDADQDSNALLVYEILEPEALKYFTVDPSTGTLTSRADIDYE 1838
>gi|449504736|ref|XP_004176434.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-23 [Taeniopygia guttata]
Length = 3375
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 77/160 (48%), Gaps = 27/160 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD------------PATEHQG--- 74
G + QV+ATD+D G ++ Y + N D F +D P E Q
Sbjct: 1555 GTAVAQVRATDRDIGLNSVLSYYITRGNEDLT--FRMDRVTGEIATRPSPPDRERQSFYS 1612
Query: 75 ---PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATD 127
++DEG LS+T TV + + D ND P F+ YE ++ EG L ++ V A D
Sbjct: 1613 LVVTVEDEGNPSLSATTTVYVTILDENDNAPAFRQQLYEVTLDEGPSTLNASLVTVQALD 1672
Query: 128 ADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYE 164
DEG N V Y++ E F +D TG+IRT K LDYE
Sbjct: 1673 QDEGPNGKVAYAITEGNILGTFRIDNATGEIRTVKELDYE 1712
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 76 IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNA 134
+ D G TVNI+V D+ND P+F + PY +PE G + V+ATD D+G
Sbjct: 119 VSDSQGXVIKGTVNIQVGDVNDNTPQFHNQPYSVRIPENTPVGTPIFIVNATDPDQGAGG 178
Query: 135 VVYYSV-PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V YS P F +D+ G + + LDYE Q Y
Sbjct: 179 SVLYSFQPPSSFFAIDSGRGIVTVIRELDYEVTQAY 214
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 78/166 (46%), Gaps = 26/166 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT--------------------E 71
+++QVKATD D G G V YR++ N ++F ++P+T E
Sbjct: 1131 SIVQVKATDADEGINGRVWYRIVKGN--EHNHFRINPSTGLVMRGVRHLDREQNSSHVLE 1188
Query: 72 HQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPY-EFSVPEGQD-GLAVGRVHATDAD 129
+ ++G + S+ V + V D+ND+ P F Y + E G +V V ATD D
Sbjct: 1189 VEAYNTEQGPMRSSVRVIVYVEDVNDEVPVFTQRQYNRLGLRETAGIGTSVAVVRATDRD 1248
Query: 130 EGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
G +V Y + + F +D +TG I T + LDYE + YL V
Sbjct: 1249 TGNGGLVSYKIVSGAEGKFEIDESTGLITTIEYLDYETKTSYLMNV 1294
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 78/170 (45%), Gaps = 37/170 (21%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI----------QD 78
LG ++ V ATD DSG+F L++Y L D F ++P T G I +D
Sbjct: 2428 LGTVILSVTATDADSGQFALIQYSL----GDGEGKFGINPNT---GDIYILSALDREKKD 2480
Query: 79 EGGLSSTATVN----------------IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
L++ A N I V DIND P+F + SV E + G +V
Sbjct: 2481 HYTLTAVARDNPGDVSSNRRENSVQVLITVLDINDVRPQFSKSQFSTSVYENEPAGTSVI 2540
Query: 122 RVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKAL-DYEKQQL 168
+ ATD DEG N VV YS+ P F ++ ++G + + + L YE+ L
Sbjct: 2541 TMSATDLDEGDNGVVTYSIEGPGAEAFKINKDSGLVTSRRRLQSYERFNL 2590
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 77/165 (46%), Gaps = 30/165 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLD-------------------NNT---DAASYFNLD 67
G TL+ + A D D G G + Y LL+ N T + + N
Sbjct: 2323 GTTLISISAVDPDKGANGQITYELLNLSPEGYACLEDHSAGKVVANRTVDYEEVQWLNFT 2382
Query: 68 -PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHA 125
A+++ P + S+ V +++ DIND NP F Y+ +V E G + V A
Sbjct: 2383 VRASDNGSPRR-----SAEIPVYLQIVDINDNNPVFSHPSYQKAVFEDVPLGTVILSVTA 2437
Query: 126 TDADEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLY 169
TDAD GQ A++ YS+ + + F ++ NTGDI ALD EK+ Y
Sbjct: 2438 TDADSGQFALIQYSLGDGEGKFGINPNTGDIYILSALDREKKDHY 2482
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 72/169 (42%), Gaps = 33/169 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---------------- 72
L +L+ V+A D+D G G V Y + + N F +D AT
Sbjct: 1661 LNASLVTVQALDQDEGPNGKVAYAITEGNI--LGTFRIDNATGEIRTVKELDYEISHGRY 1718
Query: 73 --------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYE--FSVPEGQDGLAVGR 122
Q PI L+STATV + + DIND P F PYE F V EGQ G V
Sbjct: 1719 TLIVTATDQCPIVSRR-LTSTATVLVNLNDINDNCPTFPR-PYEGPFDVTEGQPGPRVWT 1776
Query: 123 VHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
A D D G + V YS+ P FV+ G++R K + +++
Sbjct: 1777 FLAHDGDSGPSGQVEYSIIAGDPLGEFVISPVEGELRVRKDAELDRENF 1825
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVP 141
+S+ATV + + D+ND +P FQ+LP+ + EG G +V +V A D DEG N V Y +
Sbjct: 882 TSSATVFVNLLDLNDNDPTFQNLPFVAEIAEGLPAGSSVFQVVAIDLDEGPNGQVSYRMQ 941
Query: 142 EDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
+P F++++ G + + LD E+ Y RV
Sbjct: 942 VGMPRMDFLINSTGGLVTSTAVLDRERIPEYFLRV 976
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 76/167 (45%), Gaps = 33/167 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDA-------------ASYFNLD 67
G ++ QV A D D G G V YR+ L N+T YF
Sbjct: 917 GSSVFQVVAIDLDEGPNGQVSYRMQVGMPRMDFLINSTGGLVTSTAVLDRERIPEYFLRV 976
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE--GQDGLAVGRVHA 125
A++ P + SST+T+ ++V D+ND+NP F Y S+PE +D V R++
Sbjct: 977 VASDAGTPAK-----SSTSTLTVKVLDVNDENPTFFPAVYNVSLPEDVARD-FKVVRLNC 1030
Query: 126 TDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
TDAD G NA + Y + +D F V G +RT +LD E Y
Sbjct: 1031 TDADIGLNAELSYFITGGNQDGKFSVGFRDGVVRTVVSLDRETVASY 1077
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 75/164 (45%), Gaps = 26/164 (15%)
Query: 31 VTLMQ--VKATDKDSGKFGLVEYRLLDNNTDAASYFN------------------LDPAT 70
VT++ + A D D G +V Y LL + D N LDP
Sbjct: 1989 VTMLNGPILALDADQGINAVVTYELLKASLDLFVINNKTGVVSVKPGGVIDREALLDPHL 2048
Query: 71 EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
E +D GGL+STA++ + + D ND P FQ + E G +V +V ATDAD
Sbjct: 2049 EFTLVARDVGGLNSTASLAVTILDDNDNRPVFQPASITAWLLENSPPGFSVLQVTATDAD 2108
Query: 130 EGQNAVVYYSVP---EDIPFVVDANTGDIRT-NKALDYEKQQLY 169
G N + Y + +D F++DA TG IR N +D E++ Y
Sbjct: 2109 SGLNQQLDYRIEGGGQD-RFLIDATTGVIRVANITIDREERDAY 2151
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 73/169 (43%), Gaps = 20/169 (11%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL--------LDNNTDAASYF-NLD 67
+ Y + +G T++QV ATD D G +G V Y LD +T LD
Sbjct: 474 VLYNVSLFENTTVGTTVLQVHATDNDVGTYGKVSYFFSDDPDRFSLDKDTGVIILTARLD 533
Query: 68 PATEHQGPI----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGR 122
T + + +D GG +T V I V D+ND P FQ Y ++ E + + V R
Sbjct: 534 FETTQRYTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKEAYLGALRENEPSVTQVVR 593
Query: 123 VHATDADEGQNAVVYYSVPEDIPF------VVDANTGDIRTNKALDYEK 165
+ A+D D N + YS+ + F + G I N LDYE+
Sbjct: 594 LRASDEDSPPNNQISYSIVQASAFRDYFDITMSEGYGVIIVNHPLDYEQ 642
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 73/159 (45%), Gaps = 31/159 (19%)
Query: 38 ATDKDSGKFGLVEYRLL---------------------DNNTDAASY--FNLDPATEHQG 74
A D DSG G VEY ++ D D ++ +NL A + +G
Sbjct: 1779 AHDGDSGPSGQVEYSIIAGDPLGEFVISPVEGELRVRKDAELDRENFPFYNLTIAAQDRG 1838
Query: 75 PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQN 133
LSST V +RV DIND +P +LP ++ E + V RV A DAD+G N
Sbjct: 1839 ----VPPLSSTILVGVRVLDINDNDPVLLNLPMNLTLSENAAVSSFVTRVLARDADQGPN 1894
Query: 134 AVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
A++ + + + F +++ +G + N+ LD E+ Y
Sbjct: 1895 ALLTFDITAGNTENAFYINSTSGIVYVNRPLDRERVAEY 1933
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDADEGQNAVVYYSV- 140
+ TATV + V D+ND P F YE SVPE ++ +V ATDADEG N V+Y +
Sbjct: 1094 TGTATVYVTVLDVNDNRPIFLQSSYEVSVPEDIPAASSIVQVKATDADEGINGRVWYRIV 1153
Query: 141 --PEDIPFVVDANTGDI-RTNKALDYEKQQLYLERV 173
E F ++ +TG + R + LD E+ ++ V
Sbjct: 1154 KGNEHNHFRINPSTGLVMRGVRHLDREQNSSHVLEV 1189
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 72/176 (40%), Gaps = 38/176 (21%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD---PATEHQGPIQDE------- 79
G T+ + A D+D G+ + Y ++ NT+ S F LD A GP+ E
Sbjct: 265 GTTVRMITAVDQDKGRPRGIGYTIVSGNTN--SIFALDYISGALTLNGPLDRENPFYSAG 322
Query: 80 ----------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGR 122
S T T NI V DIND PEF + Y ++PE Q G A+
Sbjct: 323 FVLTVKGTELNDDRTPSNASVTTTFNILVIDINDNAPEFNASEYSVAIPELAQVGFALPL 382
Query: 123 -VHATDADEGQNAV--VYYSVPEDIPFVVDANT----GDIRTNKA--LDYEKQQLY 169
+ D DEG N+V VY F++ + DIR A LD+E Y
Sbjct: 383 FIQVQDKDEGPNSVFEVYLVGNNSNHFIISPTSIQGKADIRVRVAVPLDFETIPRY 438
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 74/171 (43%), Gaps = 38/171 (22%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-------LDNNTDAA---------SY--FNLDPATE 71
G +++ + ATD D G G+V Y + N D+ SY FNL
Sbjct: 2536 GTSVITMSATDLDEGDNGVVTYSIEGPGAEAFKINKDSGLVTSRRRLQSYERFNLTVVAT 2595
Query: 72 HQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLP------YEFSVPEGQDGLAVGRVHA 125
+G L T ++I V DIND P F P + +P + V V+A
Sbjct: 2596 DKG----HPPLWGTTMLHIEVIDINDNRPVFVRPPNGTILHIKEEIPLRSN---VYEVYA 2648
Query: 126 TDADEGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYEKQQLY 169
TD DEG N VV Y++ + F +D+ +G I+T LD EKQ +Y
Sbjct: 2649 TDKDEGLNGVVLYNLLKTGAGNKDWEYFSIDSVSGLIQTAMRLDREKQAVY 2699
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 55/118 (46%), Gaps = 18/118 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYR---------LLDNNTDAASYFNLDPATEHQGPIQ--- 77
G +++QV ATD DSG ++YR L+D T N+ E + +
Sbjct: 2096 GFSVLQVTATDADSGLNQQLDYRIEGGGQDRFLIDATTGVIRVANITIDREERDAYRLTV 2155
Query: 78 ---DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
D+G LS TATV+I + DIND PEF + S+PE G V V A D D
Sbjct: 2156 VAVDQGTPALSGTATVSIVIDDINDCRPEFINPIQTVSIPESAPPGTVVAEVTAIDRD 2213
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 83/187 (44%), Gaps = 31/187 (16%)
Query: 10 LEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA 69
++TSDS ++A D +G + V A D D+G+ G V + L N A
Sbjct: 1429 FDITSDSSV--SVAEDS-AVGKRVALVLARDPDAGRNGQVTFSLTSGNIGRAFEIRTTNG 1485
Query: 70 TEHQ----GPIQDE-------------GGL---SSTATVNIRVTDINDKNPEFQSLPYEF 109
T + P+ E GG+ + + + D+ND P S P+ +
Sbjct: 1486 TYGEVFVARPLDRELLDHYTLRIQASDGGVPPRRKEHVLRVNILDVNDNPPVIDS-PFGY 1544
Query: 110 SVPEGQD---GLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKA-LD 162
+V ++ G AV +V ATD D G N+V+ Y + ED+ F +D TG+I T + D
Sbjct: 1545 NVSVSENVGGGTAVAQVRATDRDIGLNSVLSYYITRGNEDLTFRMDRVTGEIATRPSPPD 1604
Query: 163 YEKQQLY 169
E+Q Y
Sbjct: 1605 RERQSFY 1611
Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 82/188 (43%), Gaps = 46/188 (24%)
Query: 20 GAMARDKHELGV--TLMQVKATDKDSGKFGLVEYRLLDN---NTDAASYFNLDPATEHQG 74
G + K E+ + + +V ATDKD G G+V Y LL N D YF++D + G
Sbjct: 2628 GTILHIKEEIPLRSNVYEVYATDKDEGLNGVVLYNLLKTGAGNKDW-EYFSIDSVS---G 2683
Query: 75 PIQ--------------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYE---- 108
IQ D+G + + + + DI+D P F P
Sbjct: 2684 LIQTAMRLDREKQAVYNLIIVACDQGQPPYETMQPLQVALDDIDDNEPIFLRPPVRHQDS 2743
Query: 109 -----FSVPE-GQDGLAVGRVH-ATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTN 158
SVPE + G VG V A DADEG NA+VYY + ++ F + + G ++
Sbjct: 2744 PQYQALSVPEHSRPGTVVGNVTGAVDADEGSNAIVYYFIAAGNQESNFQL-SREGKLKVL 2802
Query: 159 KALDYEKQ 166
+ LD EK+
Sbjct: 2803 RDLDREKE 2810
Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSV----PEGQDGLAVGRVHATDADEGQNAVVYY 138
+ A VNI + DIND P ++ PY ++ P D V V A D D G+N V Y
Sbjct: 770 TGIAMVNITLLDINDNYPTWKDEPYFINLVEMTPPNSD---VTTVVAVDPDLGENGTVVY 826
Query: 139 SV-PEDIPFVVDANTGDIRTNKA-LDYEK---QQLYLERVFLIS 177
S+ P + + +++ TG IRT+ LD E Q+ L R ++S
Sbjct: 827 SIRPPNKFYSLNSTTGKIRTSGVLLDRENPNAQEAQLMRRIVVS 870
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADE----GQNAVV 136
L+ST V I V D ND P F Y +V E G V ++ATD D GQ +++
Sbjct: 662 LNSTVPVTIEVFDENDNPPTFSKPSYVIAVMEDIMAGATVLFLNATDMDRSREYGQESII 721
Query: 137 YYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
YS+ F ++A +G+I T LD E + Y+
Sbjct: 722 -YSLEGSSHFRINARSGEITTTSLLDREAKSEYI 754
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI 144
A V I + + ND P F + Y S+ E G V +VHATD D G V Y +D
Sbjct: 455 ARVKINLINENDNRPVFSKVLYNVSLFENTTVGTTVLQVHATDNDVGTYGKVSYFFSDDP 514
Query: 145 -PFVVDANTGDIRTNKALDYEKQQLY 169
F +D +TG I LD+E Q Y
Sbjct: 515 DRFSLDKDTGVIILTARLDFETTQRY 540
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEF---SVPEG-QDGLAVGRVHATDADEGQNAVVYYSV- 140
A + + V D+ND P F+ + + EG G + + A D D+G N + Y +
Sbjct: 2288 AKLTVNVLDVNDNTPRFRPFGVTYFTERILEGATQGTTLISISAVDPDKGANGQITYELL 2347
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQ 167
PE + D + G + N+ +DYE+ Q
Sbjct: 2348 NLSPEGYACLEDHSAGKVVANRTVDYEEVQ 2377
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 69/171 (40%), Gaps = 28/171 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + +G + V ATD D G G V Y +S+F +D
Sbjct: 150 YSVRIPENTPVGTPIFIVNATDPDQGAGGSVLYSF----QPPSSFFAIDSGRGIVTVIRE 205
Query: 71 -----------EHQGPIQDEGG-LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DG 117
+ QD+ LS+ A + + +TD+ D +P F +LPY ++ E G
Sbjct: 206 LDYEVTQAYQLQVNATDQDKNKPLSTLANLAVIITDVQDMDPIFINLPYSTNIYENSPPG 265
Query: 118 LAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEK 165
V + A D D+G+ + Y++ + F +D +G + N LD E
Sbjct: 266 TTVRMITAVDQDKGRPRGIGYTIVSGNTNSIFALDYISGALTLNGPLDREN 316
Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNAVVYYSV 140
V I + DIND++P+F Y V + + G + RV A DAD G N++V Y++
Sbjct: 2850 VRIFLDDINDQSPQFTKSEYTAGVATDAKVGSELIRVLAVDADVGNNSLVLYNI 2903
>gi|47222857|emb|CAF96524.1| unnamed protein product [Tetraodon nigroviridis]
Length = 482
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 81/172 (47%), Gaps = 35/172 (20%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-----------Q 77
+G ++M+V A+D D +G R++ + D +F +D H G I Q
Sbjct: 147 IGTSVMKVTASDADDPTYG-SSARVVYSVLDGEKFFTVD---RHTGIIMTAVADLDRETQ 202
Query: 78 DE--------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR 122
D GGLS + TV I +TD+ND P F Y+FSV EG G AVGR
Sbjct: 203 DRYELVVKATDMAGQMGGLSGSTTVTIVITDVNDNPPRFPQKMYQFSVSEGAAVGTAVGR 262
Query: 123 VHATDADEGQNAVVYYSVP---EDIPFVVDANTGD--IRTNKALDYEKQQLY 169
V ATDAD G+N + Y + E DA T + + K LD+E ++ +
Sbjct: 263 VIATDADMGENTDMTYLIKDGGELFKVTTDAETQEAVVSIKKPLDFENKRTH 314
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPE-DI 144
I+V DIND P+F PY SV E G +V +V A+DAD+ G +A V YSV + +
Sbjct: 120 IKVQDINDSEPKFLEGPYIGSVAELSPIGTSVMKVTASDADDPTYGSSARVVYSVLDGEK 179
Query: 145 PFVVDANTGDIRTNKA-LDYEKQQLY 169
F VD +TG I T A LD E Q Y
Sbjct: 180 FFTVDRHTGIIMTAVADLDRETQDRY 205
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G + L VG++H TD+DEG+ + Y E F++D TGDI + LD E++ Y
Sbjct: 41 GTEPLYVGKIH-TDSDEGEGNIKYSISGEGAGSIFIIDELTGDIHATERLDREEKAFYTL 99
Query: 172 R 172
R
Sbjct: 100 R 100
>gi|395504792|ref|XP_003756731.1| PREDICTED: protocadherin gamma-A12 [Sarcophilus harrisii]
Length = 847
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 74/165 (44%), Gaps = 28/165 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------ 76
+G L+ V ATD D G G V Y + + A F LD H G I
Sbjct: 257 MGTWLLTVNATDPDEGINGEVTY-FWNIHNKAKQIFELD---SHSGRISTVGNLNHEESG 312
Query: 77 --------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
+D GL + A V + V D+ND PE SVPEG G + ++ D
Sbjct: 313 FYEMEVQAKDNAGLFARANVLVTVVDVNDNAPEVTIASLITSVPEGSPSGTVIALLNIHD 372
Query: 128 ADEGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
D G+N +V S+P ++PF ++ N G+ + TN ALD E+ Y
Sbjct: 373 QDSGENGLVTCSIPSNLPFKLEKNYGNYYSLVTNTALDREQVSEY 417
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 70/172 (40%), Gaps = 28/172 (16%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDN---------NTDAASYFNL--------- 66
++ +G+ A D D G GL Y+L N D A Y L
Sbjct: 144 EQANVGIKCRLPNAWDLDMGMNGLQSYQLSPNPHFSLHVQSKADGAKYPELVLERALDRE 203
Query: 67 -DPATEHQGPIQDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQD-GLAVGR 122
+P D G + TV +RV D ND P F Y S+PE G +
Sbjct: 204 EEPVHRLILTASDGGDPVRSGTVRVRVIVLDANDNAPVFTQSVYSVSIPENVPMGTWLLT 263
Query: 123 VHATDADEGQNAVVYY-----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V+ATD DEG N V Y + + I F +D+++G I T L++E+ Y
Sbjct: 264 VNATDPDEGINGEVTYFWNIHNKAKQI-FELDSHSGRISTVGNLNHEESGFY 314
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 69/162 (42%), Gaps = 26/162 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDN-----NTDAASYFNLDPATEHQGPIQDEGGLSS 84
G + + D+DSG+ GLV + N + +Y++L T E ++
Sbjct: 362 GTVIALLNIHDQDSGENGLVTCSIPSNLPFKLEKNYGNYYSLVTNTALDREQVSEYNITV 421
Query: 85 TAT------------VNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEG 131
TAT + + V D+ND P F Y + E G ++ V A+D D
Sbjct: 422 TATDFGTPPLSTDTLITLHVADVNDNPPAFSQTSYSAYIRENNPRGASIYSVTASDPDSE 481
Query: 132 QNAVVYYSVPEDI----PF----VVDANTGDIRTNKALDYEK 165
+NA + Y++ DI P +++ TG + ++ DYEK
Sbjct: 482 KNAQITYTIANDIFQEDPLSSYVSINSETGVLYALRSFDYEK 523
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 81/207 (39%), Gaps = 54/207 (26%)
Query: 7 PSALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL 66
P A TS Y A R+ + G ++ V A+D DS K + Y T A F
Sbjct: 448 PPAFSQTS----YSAYIRENNPRGASIYSVTASDPDSEKNAQITY------TIANDIFQE 497
Query: 67 DPATEHQGPIQDEGG-----------------LSSTAT------------VNIRVTDIND 97
DP + + I E G L TAT + + + D ND
Sbjct: 498 DPLSSYVS-INSETGVLYALRSFDYEKFRDLQLRVTATDSGEPPLNNSVFLTLFILDQND 556
Query: 98 KNPE--FQSLP------YEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---PEDIPF 146
+PE + + P E + + G V +V A D D GQNA ++Y + E F
Sbjct: 557 NSPEILYPTFPTDGSRGVELAPRTAEPGYLVTKVVAVDGDSGQNAWLFYRLLKATEPGLF 616
Query: 147 VVDANTGDIRTNKAL---DYEKQQLYL 170
V + G+IRT ++ D KQ L +
Sbjct: 617 SVGLHNGEIRTARSFLDKDALKQNLVV 643
>gi|351701751|gb|EHB04670.1| Protocadherin Fat 4 [Heterocephalus glaber]
Length = 4953
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F +DP + E +
Sbjct: 1755 GSKIMQLTAMDADEGANALVTYAIISGADDS---FRIDPESGDLIATKRLDRERRSKYSL 1811
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G SS +NI ++D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1812 LVRADDGLQSSDMRINITISDVNDHTPKFSRPVYSFDIPEDTTPGSLVAAILATDDDSGV 1871
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG + LDYE QQ Y+ V
Sbjct: 1872 NGEITYIVNEDDQDGIFFLNPVTGVFNLTRVLDYEAQQYYILSV 1915
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 79/166 (47%), Gaps = 22/166 (13%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLDPATE 71
+ H +G + V A D+D+ GL+ Y + N + A + + +
Sbjct: 3099 ESHSIGAIVRTVSARDRDAAMNGLITYTISAGNEEGIFAINSSTGVLTLAKALDYELCQK 3158
Query: 72 HQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
H+ I D G ++ T +V I V D+ND +P F Y +V E G V ++AT
Sbjct: 3159 HEITISATDGGWVARTGYCSVTITVIDVNDNSPVFVPDEYFPTVLENAPSGTTVIHLNAT 3218
Query: 127 DADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D D G NAV+ Y+V D+ FV+D NTG I T LD+E +Q Y
Sbjct: 3219 DNDSGTNAVIAYTVQSSDSDL-FVIDPNTGVITTQGFLDFETKQSY 3263
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 75/168 (44%), Gaps = 22/168 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG + +V +D+D G + Y + TD + F ++P+T
Sbjct: 2773 SQIFSAHVPENSPLGYIVTRVTTSDEDIGTNAISRYSI----TDMSLPFTINPSTGDIII 2828
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
P+ E G + + V I VTDIND P F Y PE D G
Sbjct: 2829 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNAPRFSRPSYYLDCPELTDIGS 2888
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
V +V+ATD DEG N ++Y + F ++A TG+I +AL Y+
Sbjct: 2889 KVTQVYATDPDEGSNGQIFYFIKSQSEYFRINATTGEIFNKQALKYQN 2936
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 24/162 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V A DKDSG G ++Y ++ N + + F+++ AT I+
Sbjct: 2686 ILTVSAMDKDSGPNGQLDYEIVHGNKENS--FSINHATGEIRSIRPLDREKVSHYMLTVK 2743
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G S + +V I + D ND P F + + VPE G V RV +D D G
Sbjct: 2744 SSDKGSPSQSTSVKVIINILDENDNAPRFSQI-FSAHVPENSPLGYIVTRVTTSDEDIGT 2802
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA+ YS+ + +PF ++ +TGDI ++ L+ E Y RV
Sbjct: 2803 NAISRYSITDMSLPFTINPSTGDIIISRPLNREDTDRYRIRV 2844
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 77/178 (43%), Gaps = 33/178 (18%)
Query: 38 ATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGGLSSTAT--- 87
ATD D G G+ YR++ N A F LD G + +GGL T
Sbjct: 159 ATDSDIGSNGVDHRSYRIIRGN--EAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPHY 216
Query: 88 -------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
VN+ V DIND P F S Y+ VPE G +V +V A D
Sbjct: 217 QLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGSSVLQVAAAD 276
Query: 128 ADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSYL 184
ADEG NA ++Y + E PF +D TG I + LD+E ++ Y V + + S L
Sbjct: 277 ADEGTNADIHYRLQDEGTPFQMDPETGLITVREPLDFEARRQYSLTVQAVDRGVPSLL 334
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 23/162 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI----QDEGGL--- 82
G L+ + ATD D G G V + L + +D S F LDP + I ++E
Sbjct: 598 GTELLVLGATDGDLGDNGTVRFSLQEAESDQRS-FRLDPVSGRLSTISSLDREEQAFYSL 656
Query: 83 ------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
SS A +N+ + D+ND +P F + Y + E + G + + V ATD D
Sbjct: 657 LVLATDLGTPPQSSVAQINVSLLDMNDNSPVFYPVQYFAHIQENEPGGSYITTVSATDPD 716
Query: 130 EGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V YS+ + F ++A +G I T ALD E++ Y
Sbjct: 717 LGPNGTVKYSISAGDRSRFQINAQSGVISTKMALDREEKTAY 758
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 77/173 (44%), Gaps = 21/173 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------AASYFNLDPAT 70
FY A + +++V A+D D G GL+ Y ++ N + + L
Sbjct: 1213 FYQATISETAANLTQVLRVSASDVDEGNNGLIHYSVIKGNEERQFAIGSTSGQVTLIGKL 1272
Query: 71 EHQGP------IQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
+++ IQ D G L+ST T+NI + D ND P F V E + G
Sbjct: 1273 DYEATPAYFLVIQAVDSGTVSLNSTCTLNIDILDENDNTPCFPKSTLFVDVLENMRIGEL 1332
Query: 120 VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD+D G NA ++YS+ F + NTG I K LD+E Q LY
Sbjct: 1333 VSSVTATDSDSGDNADLHYSITGSNNHGTFSISPNTGSIFLAKKLDFETQSLY 1385
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +A+D DSG +EY LL+ + S +D G + D
Sbjct: 2068 VFKAQASDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLMVVATD 2127
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y+ + E G + +V A D DEG N
Sbjct: 2128 KGQPALSSSTEVVVMVLDINDNNPVFAQALYKVEINEDTLTGTDILQVFAADGDEGTNGQ 2187
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V Y + + + F +D+ TG I K LD EK YL V
Sbjct: 2188 VRYGIVDGSTNQEFRMDSVTGVITVVKPLDREKTATYLLTV 2228
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 76/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3209 GTTVIHLNATDNDSGTNAVIAYTVQSSDSD---LFVIDPNT---GVITTQGFLDFETKQS 3262
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S ATVNI++ N+ P F S Y F + E G VG V A+
Sbjct: 3263 YHLIVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFAS 3322
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F ++ TG I + LD EK+ ERV L
Sbjct: 3323 DRDMGTDGEVHYLIFGNSRKKGFQINKKTGQIYVSGLLDREKE----ERVSL 3370
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 72/155 (46%), Gaps = 18/155 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI----Q 77
T++QV A D D G + Y L N D A + LD T+ +
Sbjct: 2277 TILQVVARDDDQGSNSKLSYVLRGGNEDQAFTLSASGELRVTQSLDRETKEHFVLVITAT 2336
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNA 134
D G L+ T TVN+ V D+ND P F S Y ++PE G V V+A+DAD NA
Sbjct: 2337 DSGFPALTGTGTVNVIVDDVNDNVPTFASKMYFTTIPEDAPTGTDVLLVNASDADASTNA 2396
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V+ + + F ++ +TG I T+ LD E + Y
Sbjct: 2397 VISI-IGGNSQFTINPSTGQIITSALLDRETKDNY 2430
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 78/162 (48%), Gaps = 22/162 (13%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQGPI 76
++G L++V A D KD G +EY + LDN+T S + + +Q +
Sbjct: 2996 KVGTKLIKVTAVDDKDFGLNSELEYFISNENYLGKFKLDNDTGWISVASSLISDLNQNFL 3055
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
QD+G LSS ATV I VT+ N PEF ++PE G V V A D
Sbjct: 3056 ITVTAQDKGNPPLSSQATVQITVTEENYHTPEFSQSHMSTTIPESHSIGAIVRTVSARDR 3115
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQ 167
D N ++ Y++ E+ F ++++TG + KALDYE Q
Sbjct: 3116 DAAMNGLITYTISAGNEEGIFAINSSTGVLTLAKALDYELCQ 3157
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 80/188 (42%), Gaps = 23/188 (12%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF---NLDPAT 70
D L Y + + +V+A+D+DSG G + Y + + N DA F L +
Sbjct: 996 DQLSYEVTLSESEPVNSRFFKVQASDEDSGANGEIAYTIAEGNAGDAFGIFPDGQLYIKS 1055
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E +QD LS+T V + + D+ND P F S Y F E Q G
Sbjct: 1056 ELDRELQDRYVLVVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAG 1115
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLER---V 173
VG+V A D D G N V YS P F + TG+I + D ++ L +R V
Sbjct: 1116 SFVGKVSAVDKDFGPNGEVRYSFEMVQPDFELHTITGEITSTHQFD--RESLMRQRGTAV 1173
Query: 174 FLISKFAT 181
F + AT
Sbjct: 1174 FSFTVIAT 1181
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 27/165 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------------ 77
G ++QV A D D G G V Y ++D +T+ F +D T ++
Sbjct: 2169 GTDILQVFAADGDEGTNGQVRYGIVDGSTNQE--FRMDSVTGVITVVKPLDREKTATYLL 2226
Query: 78 -----DEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDA 128
D G + T+TV+I + D+ND P F+ PY +VPE L + +V A D
Sbjct: 2227 TVQAADRGSTPRTDTSTVSIVLLDMNDFVPTFELSPYLVNVPENLGTLPKTILQVVARDD 2286
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D+G N+ + Y + ED F + A +G++R ++LD E ++ ++
Sbjct: 2287 DQGSNSKLSYVLRGGNEDQAFTLSA-SGELRVTQSLDRETKEHFV 2330
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L ATV++ + DIND P+F Y+ ++ E L V RV A+D DEG N +++YSV
Sbjct: 1189 LKDQATVHVYMKDINDNAPKFLKDFYQATISETAANLTQVLRVSASDVDEGNNGLIHYSV 1248
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
E+ F + + +G + LDYE Y
Sbjct: 1249 IKGNEERQFAIGSTSGQVTLIGKLDYEATPAYF 1281
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1723 AEVEITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTYAIISGA 1782
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ K LD E++ Y
Sbjct: 1783 DDSFRIDPESGDLIATKRLDRERRSKY 1809
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 58/134 (43%), Gaps = 16/134 (11%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPATEHQGPIQ 77
+ + G ++ Q KA D D G G+V Y L N N + L P H G Q
Sbjct: 903 ENWQAGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFAINEKNGNISLLGPLDVHAGSYQ 962
Query: 78 DE--------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
E LSS+ + + V D+ND P F L YE ++ E + +V A+D
Sbjct: 963 IEILASDMGVPQLSSSVILTLYVHDVNDNPPVFDQLSYEVTLSESEPVNSRFFKVQASDE 1022
Query: 129 DEGQNAVVYYSVPE 142
D G N + Y++ E
Sbjct: 1023 DSGANGEIAYTIAE 1036
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 73/167 (43%), Gaps = 41/167 (24%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD--EGGLS---------- 83
V ATD DSG + Y ++ N +F++ +EH G + GGL+
Sbjct: 496 VSATDGDSGLNANLRYSIISGN--GLGWFHI---SEHSGLVTTGATGGLNRELASEIVLN 550
Query: 84 ------------STATVNIRVTDINDKNPEF-QSLPYEFSV----PEGQDGLAVGRVHAT 126
S A + + + D+ND+ P F Q Y+ SV P G + L +G AT
Sbjct: 551 ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYKVSVVENAPTGTELLVLG---AT 607
Query: 127 DADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
D D G N V +S+ E F +D +G + T +LD E+Q Y
Sbjct: 608 DGDLGDNGTVRFSLQEAESDQRSFRLDPVSGRLSTISSLDREEQAFY 654
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV- 140
SS ++I V D+ND +P F+ P+ + E + V A D D G N + Y +
Sbjct: 2648 FSSYEKLDITVLDVNDNSPIFKEDPFVSEILENLSPRKILTVSAMDKDSGPNGQLDYEIV 2707
Query: 141 --PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
++ F ++ TG+IR+ + LD EK Y+ V
Sbjct: 2708 HGNKENSFSINHATGEIRSIRPLDREKVSHYMLTV 2742
Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
G ++ VNI V D+ND +P F Q++ V Q G ++ + A D DEG N +V Y
Sbjct: 870 GTVTGDTVVNITVKDLNDNSPHFLQAVESVNVVENWQAGHSIFQAKAVDPDEGVNGMVLY 929
Query: 139 SV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
S+ P+++ F ++ G+I LD +E
Sbjct: 930 SLKQNPKNL-FAINEKNGNISLLGPLDVHAGSYQIE 964
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 76/192 (39%), Gaps = 35/192 (18%)
Query: 2 TPCPIPSALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA 61
TPC +LF + + +G + V ATD DSG + Y + +N
Sbjct: 1311 TPC-------FPKSTLFVDVL--ENMRIGELVSSVTATDSDSGDNADLHYSITGSNNHGT 1361
Query: 62 SYFNLDPAT-----------EHQG------PIQDEGG--LSSTATVNIRVTDINDKNPEF 102
F++ P T E Q +D+G SST +V I V D ND P F
Sbjct: 1362 --FSISPNTGSIFLAKKLDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSF 1419
Query: 103 QSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP----FVVDANTGDIRT 157
S+ E G +V V A D D N + Y++ + +P F +D G I T
Sbjct: 1420 PPGDIFKSIVENIPIGTSVISVTAHDPDADINGQLSYTIVQQMPRGNHFTIDEVKGTIYT 1479
Query: 158 NKALDYEKQQLY 169
N +D E L+
Sbjct: 1480 NAEIDREFANLF 1491
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE-DI-P 145
V I VTD+ND P F S + P G + + A D DEG N V Y + D+
Sbjct: 1514 VTILVTDLNDNVPMFISQNALAADPSSVIGSVLTTIMAADPDEGANGEVEYEIVNGDMDT 1573
Query: 146 FVVDANTGDIRTNKAL 161
F+VD +GD+R AL
Sbjct: 1574 FIVDRYSGDLRVASAL 1589
Score = 39.3 bits (90), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 72 HQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADE 130
H P + SS A++ I V DIND P F Y ++ E G V V ATD D
Sbjct: 444 HGAPPAEVQARSSVASLVIFVNDINDHPPVFAQQVYRVNLSEEAPPGSYVSGVSATDGDS 503
Query: 131 GQNAVVYYSV 140
G NA + YS+
Sbjct: 504 GLNANLRYSI 513
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 5/123 (4%)
Query: 59 DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
++ S++NL H P +STA V+I + D+ND P F S P +PE
Sbjct: 2008 ESQSFYNL-VVQVHDLPQVPASRFTSTAQVSIILLDVNDNPPTFLS-PKLTYIPENTPID 2065
Query: 118 LAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
V + A+D D G N+ + Y++ P F + G++R LD E+ Y V
Sbjct: 2066 TVVFKAQASDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLMVVA 2125
Query: 176 ISK 178
K
Sbjct: 2126 TDK 2128
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 68/170 (40%), Gaps = 20/170 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASY---FNL 66
Y A ++ G + V ATD D G G V+Y + ++ + S +
Sbjct: 693 YFAHIQENEPGGSYITTVSATDPDLGPNGTVKYSISAGDRSRFQINAQSGVISTKMALDR 752
Query: 67 DPATEHQGPI--QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
+ T +Q I D G L S A V I V D D P F + Y F V E G VG
Sbjct: 753 EEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFENVALGYHVG 812
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
V A+ D N + Y D F ++ TG + T +D E+Q Y
Sbjct: 813 SVSASTMDLHSN-ISYLITTGDQKGMFAINQVTGQLTTASVIDREEQSFY 861
>gi|148224178|ref|NP_001079094.1| cadherin 6, type 2, K-cadherin (fetal kidney) precursor [Xenopus
laevis]
gi|11119970|gb|AAG30810.1|AF263273_1 cadherin-6' [Xenopus laevis]
Length = 792
Score = 69.3 bits (168), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 37/185 (20%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + E+G ++QV A D D +G V Y +L YF+++ T
Sbjct: 165 LYTATVPEMSEVGAFVVQVTANDADDPTYGNSARVVYSILQ----GQPYFSVESETGIIK 220
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
+++ IQ + GGLS T VNI ++D+ND P F Y+ V
Sbjct: 221 TALPNMDRENREQYKVVIQAKDMGGQLGGLSGTTVVNIALSDVNDNPPRFLQSTYQLRVL 280
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYE 164
E G ++G++ A D DEG+NA Y + E DI D G I K LD+E
Sbjct: 281 ESSPVGSSIGKIKANDTDEGENAETEYHISEGDESNMFDIITDRDTQEGVITVKKPLDFE 340
Query: 165 KQQLY 169
K++LY
Sbjct: 341 KKKLY 345
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y +VPE + G V +V A DAD+ G +A V YS+ + P
Sbjct: 149 IKIHDINDNEPKFTQDLYTATVPEMSEVGAFVVQVTANDADDPTYGNSARVVYSILQGQP 208
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 209 YFSVESETGIIKTALPNMDRENREQY 234
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H+ D D+G ++ Y + + FV++ NTGDI+ K LD E++ +Y+
Sbjct: 70 GSDYQYVGKLHS-DQDKGDGSLKYILSGDGVGDLFVINENTGDIQATKRLDREEKPVYIL 128
Query: 172 RVFLISKF 179
R +++
Sbjct: 129 RAQAVNRI 136
>gi|395834630|ref|XP_003790298.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23 [Otolemur garnettii]
Length = 2951
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 89/179 (49%), Gaps = 31/179 (17%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA----------- 69
A ++ +G + V A D D G+ G V Y +L N D A F LD +
Sbjct: 1218 AHVKEDIMVGSLVHHVTAQDPDEGRNGKVTYSILSGNEDMA--FVLDESSGLLTTACPLD 1275
Query: 70 ----TEHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAV 120
T+H + +GG LS++ T+ I V D+ND+ P F+ YE SV E ++ G V
Sbjct: 1276 YEIKTQHVLTLLALDGGVPALSASQTLTITVLDVNDEVPVFRQHLYEVSVKENRNPGEFV 1335
Query: 121 GRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLERV 173
RV A D D G N+ +++ + +P F +++ TG++ TN LD E Q+++ RV
Sbjct: 1336 TRVEAVDKDSGINSKLHFEI---LPGASLGLFEINSETGEVVTNTTLDREVQEIFTLRV 1391
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 25/178 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA-----T 70
+L+Y + R+ E+G ++++ A DKD G G +EY L +A+ F +DP T
Sbjct: 1498 TLYYQSSVREDAEVGTVVLRLSAVDKDEGLNGQIEYFL---TAEASGTFTIDPVEGTLRT 1554
Query: 71 EH------------QGPIQD---EGGLSSTATVNIRVTDINDKNPEFQSLPYE-FSVPEG 114
H + +D +G S+T + + VTD+ND NP ++ P++ F P+
Sbjct: 1555 SHTLDREARSQHTFRAVARDCSTQGSRSTTVIIKVHVTDVNDNNPVWEQNPFDVFLSPQS 1614
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLE 171
+ A D D G N V +S E F +D TG+IR + E ++L+
Sbjct: 1615 PINQTTAVLKADDPDLGPNGTVIFSFAETQSLFSIDKYTGEIRLQQNPSSEYFPMWLQ 1672
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPY----EFSVPEGQD-GLAVGRVHATDADEGQNAVVY 137
++T TV + VTDIND P F + V EGQ + V V A D DEG NA V
Sbjct: 867 NATMTVYVSVTDINDNRPFFPQYLHGKELHIKVLEGQPVNMLVTTVFAKDLDEGNNAEVI 926
Query: 138 YSVPED---IPFVVDANTGDIRTNKALDYEKQQLY 169
YSV + F +DAN+G+IRT L + + Y
Sbjct: 927 YSVSSEDGSDHFKIDANSGEIRTTTVLSCDYRPSY 961
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 27/177 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNN-------TDAASYFNLDPATE--HQGPI------ 76
T+ V A D D+G +G + Y +L +D +F +DP T H I
Sbjct: 2352 TICSVNALDFDAGPYGELTYSILSPCFTPHGMPSDHDLFF-IDPLTGDIHAKQILDYENG 2410
Query: 77 ---------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHAT 126
+D GG +++ V + + I++ P F Y F++PE + +GRV A+
Sbjct: 2411 DKYCLTVQAKDRGGSTASLMVWVDIEGIDEFEPIFTQDQYFFTLPEKNKVRQLIGRVEAS 2470
Query: 127 DADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATS 182
DAD G + ++ YS+ P F+V+ G+I +AL K Q+ E + + A S
Sbjct: 2471 DADAGIDGIILYSLGTSSPFFLVNKTNGNIYFIRALPPIKSQISKEDIMEMKIIAHS 2527
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---PEDIPF 146
+ + D+ND +P F S P + G V V A D DEG+N V YS+ ED+ F
Sbjct: 1200 VVILDVNDHSPTFISFPIAHVKEDIMVGSLVHHVTAQDPDEGRNGKVTYSILSGNEDMAF 1259
Query: 147 VVDANTGDIRTNKALDYE 164
V+D ++G + T LDYE
Sbjct: 1260 VLDESSGLLTTACPLDYE 1277
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
LSST ++I V D+ND +P+F S Y V E G + V A D D G +A + Y +
Sbjct: 2210 LSSTTIISIEVLDVNDNSPKFSSPDYYAHVKESTPLGSHITVVSADDHDVGSHAEIIYHI 2269
Query: 141 P---EDIPFVVDANTGDIRTNKALDYEK 165
E F ++ TG + +K LDYE+
Sbjct: 2270 TSGDEKGHFYLEEKTGVLYLSKLLDYEE 2297
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 62/153 (40%), Gaps = 35/153 (22%)
Query: 36 VKATDKDSGKFGLVEYRLLD--NNTDAASYFNLDPA-----------TEHQGPIQD---- 78
V+A+D D+G +GLVEY + D + +A F +DP E I D
Sbjct: 118 VEASDADAGLYGLVEYSIYDGFQSYEAPQVFWIDPRDGRICVSKDIDRERDPAIYDLLVK 177
Query: 79 ---------------EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGR 122
GGLS+ A V + + D+ND +P F Y S+ + Q G +
Sbjct: 178 AKDGDXRLMVHLLLVPGGLSAQAFVRVELEDVNDNHPMFNPSTYVTSISAQTQPGTEIIN 237
Query: 123 VHATDADEGQNAVVYYSVPEDIP--FVVDANTG 153
V V Y +P D+ F +D+ TG
Sbjct: 238 VLXXXXXXXXGTVSYELLPGDLSSLFTIDSTTG 270
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVP 141
S+ VNI V D+ND +P F + E + + G A+ A D D G N V Y++
Sbjct: 508 CSSTEVNITVIDVNDNHPVFLTASEEIKISQTTAPGTALYLARAEDKDSGLNGFVQYAIA 567
Query: 142 EDIP--FVVDANTGDIRTNKAL 161
P F VD G + N++L
Sbjct: 568 GQGPGVFAVDTGLGLVYLNRSL 589
Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 63/179 (35%), Gaps = 28/179 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y A ++ LG + V A D D G + Y + + Y + + D
Sbjct: 2235 YYAHVKESTPLGSHITVVSADDHDVGSHAEIIYHITSGDEKGHFYLEEKTGVLYLSKLLD 2294
Query: 79 ----------------EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VG 121
E S A V + V D ND P+F + PE + +
Sbjct: 2295 YEEIIKFTLTVQASDKEKKHFSFAVVFVNVLDDNDHVPQFLFSSFSCVAPENLPVFSTIC 2354
Query: 122 RVHATDADEGQNAVVYYSV------PEDIP-----FVVDANTGDIRTNKALDYEKQQLY 169
V+A D D G + YS+ P +P F +D TGDI + LDYE Y
Sbjct: 2355 SVNALDFDAGPYGELTYSILSPCFTPHGMPSDHDLFFIDPLTGDIHAKQILDYENGDKY 2413
Score = 38.9 bits (89), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP 141
LS T + I+VTDIND P F S G V RV D D A ++ P
Sbjct: 1894 LSDTTVIKIQVTDINDNAPAFLSSEAVEIAENFLPGAVVTRVSVHDMDLNP-AFIFSFTP 1952
Query: 142 EDIP---FVVDANTGDIRTNKALDYEKQQLY 169
P F +D NTG + + LD+E+ Y
Sbjct: 1953 VGNPGSKFTIDRNTGVVMLVETLDFEEVAEY 1983
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 57/140 (40%), Gaps = 17/140 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNL 66
Y ++ G + +V+A DKDSG + + +L + + + L
Sbjct: 1320 LYEVSVKENRNPGEFVTRVEAVDKDSGINSKLHFEILPGASLGLFEINSETGEVVTNTTL 1379
Query: 67 DPATEH----QGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
D + + ++D G LSST T+ V D ND PEF + + E Q+ V
Sbjct: 1380 DREVQEIFTLRVRVRDGGVPSLSSTTTILCIVEDENDHAPEFIVPSHSIEILENQEPEVV 1439
Query: 121 GRVHATDADEGQNAVVYYSV 140
V A D D G N + Y +
Sbjct: 1440 YAVLAFDMDAGNNKAIKYYI 1459
>gi|440902766|gb|ELR53515.1| Protocadherin Fat 4 [Bos grunniens mutus]
Length = 4963
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F +DP + E +
Sbjct: 1737 GSKIMQLTAMDADEGANALVTYTIISGADDS---FRIDPESGDLIATKRLDRERRSKYSL 1793
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G SS +NI V+D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1794 LVRADDGLQSSDMRINITVSDVNDHTPKFSRPVYSFDIPEDTTPGSLVAAILATDDDSGV 1853
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG + LDYE QQ Y+ V
Sbjct: 1854 NGEITYIVNEDDEDGIFFLNPVTGVFNLTRMLDYEAQQYYILTV 1897
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 26/172 (15%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL+ Y + N + A + +
Sbjct: 3079 ATIPESHSVGAIVRTVSARDRDTAMNGLIRYSISSGNEEGIFAINSSTGVLTLAKALDYE 3138
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEF---SVPEGQDGLAV 120
+H+ + D G +S T +V + V D+ND +P F LP E+ + G V
Sbjct: 3139 LCQKHEMTVSATDGGWVSRTGYCSVTVNVIDVNDNSPVF--LPDEYFPTVLENAPSGTTV 3196
Query: 121 GRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y++ D+ FV+D NTG + T LD+E +Q Y
Sbjct: 3197 IHLNATDADSGTNAVIAYTIQSSDSDL-FVIDPNTGVVTTQGFLDFETKQSY 3247
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 77/172 (44%), Gaps = 20/172 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN------TDAASY-------- 63
FY A + +++V A+D D G GL+ Y ++ N D+ S
Sbjct: 1196 FYQATISESAANLTQVLRVSASDVDEGSNGLIHYSVIKGNEERQFAIDSTSGQVTLIGRL 1255
Query: 64 -FNLDPATEHQGPIQDEGGLS--STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
+ PA D G +S ST T+NI + D ND P F+S + + + G V
Sbjct: 1256 DYEATPAYSLVIQAVDSGAVSLNSTCTLNIDILDENDNTPSFKSTLFVDVLENMRIGELV 1315
Query: 121 GRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V ATD+D G NA ++YS+ F + NTG I K LD+E Q LY
Sbjct: 1316 SSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSIFLAKKLDFETQSLY 1367
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 24/162 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V A DKDSG G ++Y +++ N + + F+++ AT I+
Sbjct: 2670 ILTVSAVDKDSGPNGQLDYEIINGNKEHS--FSINHATGEIRSIRPLDREKISQYVLIVK 2727
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D G S + +V I + D ND P F + + VPE G V RV +D D G
Sbjct: 2728 SSDRGSPSQSTSVKVIINILDENDNAPRFSQI-FSAHVPENSPLGYTVTRVTTSDEDIGV 2786
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA+ YS+ + +PF ++ +TGDI ++ L+ E Y RV
Sbjct: 2787 NAISRYSIMDTSLPFTINPSTGDIVISRPLNREDTDRYRIRV 2828
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 22/168 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y ++D + F ++P+T
Sbjct: 2757 SQIFSAHVPENSPLGYTVTRVTTSDEDIGVNAISRYSIMDTSLP----FTINPSTGDIVI 2812
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V I VTD+ND P F Y PE + G
Sbjct: 2813 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPELTEIGS 2872
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
V +V ATD DEG N V+Y + F ++A+TG+I + L Y+
Sbjct: 2873 KVTQVSATDPDEGSNGQVFYFIKSQSEYFRINASTGEIFNKQVLKYQN 2920
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 71/157 (45%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +ATD DSG +EY LL+ + + + +D G + D
Sbjct: 2050 VFKAQATDPDSGPNSYIEYTLLNPSGNKFTIGTIDGEVRLTGELDREEVSNYTLTVVATD 2109
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y+ + E G + +V A D DEG N
Sbjct: 2110 KGHPSLSSSTEVVVMVLDINDNNPVFAQAMYKVEINENTLTGTDITQVFAADGDEGTNGQ 2169
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y + + + F +D+ TG I K LD EK Y
Sbjct: 2170 VRYGIVDGNANQEFRIDSVTGAITVAKPLDREKTPTY 2206
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 74/162 (45%), Gaps = 23/162 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI----QDEGGL--- 82
G L+ + ATD D G G V + L + TD S F LDP + I ++E
Sbjct: 581 GTELLVLGATDGDLGDNGTVRFSLQEAETDQRS-FRLDPVSGRLSTISSLDREEQAFYSL 639
Query: 83 ------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
SS +N+ + DIND +P F + Y + E + G + + V ATD D
Sbjct: 640 LVLATDLGSPPQSSMVRINVSLLDINDNSPVFYPVQYFAHIQENEPGGSYITTVSATDPD 699
Query: 130 EGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G N + YS+ + F V+A +G I T ALD E++ Y
Sbjct: 700 LGLNGTIKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAY 741
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 38 ATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGGLSSTAT--- 87
ATD D G G+ YR++ N A F LD G + +GGL T
Sbjct: 159 ATDSDIGSNGVDHRSYRIIQGN--EAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQY 216
Query: 88 -------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
VN+ V DIND P F S Y+ VPE G +V +V A D
Sbjct: 217 QLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAAVGSSVLQVAAAD 276
Query: 128 ADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ADEG NA + + + E PF +D TG I + LD+E ++ Y
Sbjct: 277 ADEGTNADIRFRLQDEGTPFQMDPETGLITVREPLDFEARRQY 319
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 78/170 (45%), Gaps = 33/170 (19%)
Query: 26 KH-ELGVTLMQVKATD-KDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------- 76
KH ++G L++V A D KD G VEY +L+ N F LD H G I
Sbjct: 2977 KHVKVGTKLIKVTAVDDKDFGLNSEVEYFILNEN--HLGKFKLD---NHTGWISVAAPLT 3031
Query: 77 -------------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAV 120
+D+G LSS ATV I VT+ N PEF ++PE G V
Sbjct: 3032 SDLNQNFLITVTAKDKGNPPLSSQATVQIIVTEENYHTPEFSQSHMSATIPESHSVGAIV 3091
Query: 121 GRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQ 167
V A D D N ++ YS+ E+ F ++++TG + KALDYE Q
Sbjct: 3092 RTVSARDRDTAMNGLIRYSISSGNEEGIFAINSSTGVLTLAKALDYELCQ 3141
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 73/156 (46%), Gaps = 18/156 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI----Q 77
T++QV A D D G + Y L N D A + LD T+ +
Sbjct: 2259 TVLQVVARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELRVTQSLDRETKEHFVLLITAT 2318
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNA 134
D G L+ T T+N+ V DIND P F S Y ++PE G V V+A+D D NA
Sbjct: 2319 DSGFPALTGTGTINVIVDDINDNVPTFASKMYFTTIPEDAPTGTDVILVNASDIDASTNA 2378
Query: 135 VVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V+ Y + + F ++ +TG I T+ LD E ++ Y
Sbjct: 2379 VISYRIIGGNSQFTINPSTGQIITSALLDRETKENY 2414
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 81/172 (47%), Gaps = 30/172 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGPI--- 76
G + QV A D D G G V Y ++D N A F +D P + P
Sbjct: 2151 GTDITQVFAADGDEGTNGQVRYGIVDGN--ANQEFRIDSVTGAITVAKPLDREKTPTYSL 2208
Query: 77 ----QDEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDA 128
D G + T+TV+I + DIND P F+ PY +VPE L V +V A D
Sbjct: 2209 TVQATDRGSTPRTDTSTVSIVLLDINDFVPIFELSPYSVNVPENLGTLPRTVLQVVARDD 2268
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D+G N+ + Y + ED F + A +G++R ++LD E ++ + V LI+
Sbjct: 2269 DQGSNSKLSYVLFGGNEDNAFTLSA-SGELRVTQSLDRETKEHF---VLLIT 2316
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 71/168 (42%), Gaps = 18/168 (10%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF---NLDPAT 70
D L Y + + +V+A DKDSG G + Y + + NT DA F L +
Sbjct: 979 DQLSYEVTLSESEPVNSRFFKVQAFDKDSGANGEIAYSIAEGNTGDAFGIFPDGQLYIKS 1038
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E +QD LS+T V + + D+ND P F S Y F E Q G
Sbjct: 1039 ELDRELQDRYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRPG 1098
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
VG+V A D D G N V YS P F + A +G+I D E
Sbjct: 1099 SFVGKVSAIDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTHQFDRE 1146
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 76/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G + +G L
Sbjct: 3193 GTTVIHLNATDADSGTNAVIAYTIQSSDSD---LFVIDPNT---GVVTTQGFLDFETKQS 3246
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S ATVNI++ N+ P F S Y F + E G VG V A+
Sbjct: 3247 YHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEISEAAPTGTIVGEVFAS 3306
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F ++ TG I + LD EK+ ERV L
Sbjct: 3307 DRDLGSDGEVHYLIFGNSRKKGFQINKKTGQIYVSGLLDREKE----ERVSL 3354
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L ATV++ + DIND P+F Y+ ++ E L V RV A+D DEG N +++YSV
Sbjct: 1172 LKDQATVHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGSNGLIHYSV 1231
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E+ F +D+ +G + LDYE Y
Sbjct: 1232 IKGNEERQFAIDSTSGQVTLIGRLDYEATPAY 1263
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1705 AEVEITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTYTIISGA 1764
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ K LD E++ Y
Sbjct: 1765 DDSFRIDPESGDLIATKRLDRERRSKY 1791
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 68/171 (39%), Gaps = 32/171 (18%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPATEHQGPIQ 77
+ + G ++ Q KA D D G G+V Y L N N + L P H G Q
Sbjct: 886 ENWQAGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFTINERNGNISLLGPLDVHAGSYQ 945
Query: 78 DE--------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
E LSS+ + + V D+ND P F L YE ++ E + +V A D
Sbjct: 946 IEILASDMGVPQLSSSFILTVYVHDVNDNPPVFDQLSYEVTLSESEPVNSRFFKVQAFDK 1005
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYL 170
D G N + YS+ E NTGD + LD E Q Y+
Sbjct: 1006 DSGANGEIAYSIAE-------GNTGDAFGIFPDGQLYIKSELDRELQDRYV 1049
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 70/159 (44%), Gaps = 33/159 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G ++ V A+D D+ ++ YR++ N S F ++P+T G I
Sbjct: 2361 GTDVILVNASDIDASTNAVISYRIIGGN----SQFTINPST---GQIITSALLDRETKEN 2413
Query: 77 -------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHA 125
D G LSS+ +V + VTD+ND P FQ PY +P G + V
Sbjct: 2414 YTLVVVASDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIPSPTPPGSFIFAVTV 2473
Query: 126 TDADEGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALD 162
TDAD G N+ ++YS+ F +D G I AL+
Sbjct: 2474 TDADIGPNSELHYSLSGRNSEKFHIDTLRGAIMAAGALN 2512
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
G ++ + VNI V D+ND +P F Q++ V Q G ++ + A D DEG N +V Y
Sbjct: 853 GTVTGDSMVNITVKDLNDNSPHFLQAVESVNVVENWQAGHSIFQAKAVDPDEGVNGMVLY 912
Query: 139 SV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
S+ P+++ F ++ G+I LD +E
Sbjct: 913 SLKQNPKNL-FTINERNGNISLLGPLDVHAGSYQIE 947
Score = 42.4 bits (98), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV- 140
SS ++I V D+ND P F+ P+ + E + V A D D G N + Y +
Sbjct: 2632 FSSYEKLDITVLDVNDNPPVFKEDPFVSEILENLSPRKILTVSAVDKDSGPNGQLDYEII 2691
Query: 141 --PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
++ F ++ TG+IR+ + LD EK Y+
Sbjct: 2692 NGNKEHSFSINHATGEIRSIRPLDREKISQYV 2723
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 70/173 (40%), Gaps = 25/173 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNN----------TDAASYFNLDP 68
LG T++ TD D G + Y + +D N ++ S++NL
Sbjct: 1940 LGSTVLVFNVTDADDGINSQLAYSIASGDSLGQFTVDKNGVLKVLKPLDRESQSFYNL-V 1998
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
H P +STA ++I + D+ND P F S P +PE V + ATD
Sbjct: 1999 VQVHDLPQLPASRFTSTAQISIILLDVNDNPPTFLS-PKLTYIPENTPIDTIVFKAQATD 2057
Query: 128 ADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
D G N+ + Y++ P F + G++R LD E+ Y V K
Sbjct: 2058 PDSGPNSYIEYTLLNPSGNKFTIGTIDGEVRLTGELDREEVSNYTLTVVATDK 2110
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N V Y + +
Sbjct: 1496 VTILVTDLNDNVPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEVEYEIVNGDTDT 1555
Query: 146 FVVDANTGDIRTNKAL 161
F+VD +GD+R AL
Sbjct: 1556 FIVDRYSGDLRVASAL 1571
Score = 39.3 bits (90), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG + Y + N F++ P T E Q
Sbjct: 1310 RIGELVSSVTATDSDSGDNADLHYSITGTNNHGT--FSISPNTGSIFLAKKLDFETQSLY 1367
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G SST +V I V D ND P F S+ E G +V V A D
Sbjct: 1368 KLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPTFPPGDIFKSIVENIPIGTSVISVTAHD 1427
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + Y++ + +P F +D G I TN +D E L+
Sbjct: 1428 PDADINGQLSYTIIQQMPRGNHFGIDEVKGTIYTNAEIDREFANLF 1473
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 67/174 (38%), Gaps = 20/174 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G ++Y + + ++ LD
Sbjct: 676 YFAHIQENEPGGSYITTVSATDPDLGLNGTIKYSISAGDRSRFQVNAQSGVISTRMALDR 735
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V I V D D P F Y F V E G VG
Sbjct: 736 EEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAYSFVVFENVALGYHVG 795
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A+ D N + Y D F ++ TG + T +D E+Q Y +V
Sbjct: 796 SVSASTMDLNSN-ISYLITTGDQKGMFAINQVTGQLTTASVIDREEQSFYQLKV 848
>gi|426247077|ref|XP_004017313.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Ovis aries]
Length = 4968
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F +DP + E +
Sbjct: 1743 GSKIMQLTAMDADEGANALVTYTIISGADDS---FRIDPESGDLIATKRLDRERRSKYSL 1799
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G SS +NI V+D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1800 LVRADDGLQSSDMRINITVSDVNDHTPKFSRPVYSFDIPEDTTPGSLVAAILATDDDSGV 1859
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG + LDYE QQ Y+ V
Sbjct: 1860 NGEITYIVNEDDEDGIFFLNPVTGVFNLTRMLDYEAQQYYILTV 1903
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 26/172 (15%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL+ Y + N + A + +
Sbjct: 3083 ATIPESHSVGAIVRTVSARDRDTAMNGLIRYSISSGNEEGIFAINSSTGVLTLAKALDYE 3142
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEF---SVPEGQDGLAV 120
+H+ + D G +S T +V + V D+ND +P F LP E+ + G V
Sbjct: 3143 LCQKHEMTVSATDGGWVSRTGYCSVTVNVIDVNDNSPVF--LPDEYFPTVLENAPSGTTV 3200
Query: 121 GRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y++ D+ FV+D NTG + T LD+E +Q Y
Sbjct: 3201 IHLNATDADSGTNAVIAYTIQSSDSDL-FVIDPNTGVVTTQGFLDFETKQSY 3251
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 75/168 (44%), Gaps = 22/168 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y ++D + F ++P+T
Sbjct: 2761 SQIFSAHVPENSPLGYTVTRVTTSDEDIGVNAISRYSIMDTSLP----FTINPSTGDIVI 2816
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V I VTDIND P F Y PE + G
Sbjct: 2817 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNAPRFSRPSYYLDCPELTEIGS 2876
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
V +V ATD DEG N V+Y + F ++A+TG+I + L Y+
Sbjct: 2877 KVTQVSATDPDEGSNGQVFYFIKSQSEYFRINASTGEIFNKQVLKYQN 2924
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 24/162 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V A DKDSG G ++Y +++ N + + F+++ AT I+
Sbjct: 2674 ILTVSAVDKDSGPNGQLDYEIINGNKEHS--FSINHATGEIRSIRPLDREKISQYVLIVK 2731
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D G S + +V I + D ND P F + + VPE G V RV +D D G
Sbjct: 2732 SSDRGSPSQSTSVKVIINILDENDNAPRFSQI-FSAHVPENSPLGYTVTRVTTSDEDIGV 2790
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA+ YS+ + +PF ++ +TGDI ++ L+ E Y RV
Sbjct: 2791 NAISRYSIMDTSLPFTINPSTGDIVISRPLNREDTDRYRIRV 2832
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 75/173 (43%), Gaps = 21/173 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN------TDAASY-------- 63
FY A + +++V A+D D G GL+ Y ++ N D+ S
Sbjct: 1201 FYQATISESAANLTQVLRVSASDVDEGNNGLIHYSVIKGNEERQFAIDSTSGQVTLIGRL 1260
Query: 64 -FNLDPATEHQGPIQDEGGLS--STATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
+ PA D G +S ST T+NI + D ND P F V E + G
Sbjct: 1261 DYEATPAYSLVIQAVDSGAVSLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGEL 1320
Query: 120 VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD+D G NA ++YS+ F + NTG I K LD+E Q LY
Sbjct: 1321 VSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSIFLAKKLDFETQSLY 1373
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 72/166 (43%), Gaps = 33/166 (19%)
Query: 38 ATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGGLSSTAT--- 87
ATD D G G+ YR++ N A F LD G + +GGL T
Sbjct: 159 ATDSDIGSNGVDHRSYRIIQGN--EAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQY 216
Query: 88 -------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
VN+ V DIND P F S Y+ VPE G +V +V A D
Sbjct: 217 QLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAAVGSSVLQVAAAD 276
Query: 128 ADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLYLER 172
ADEG NA + Y + E PF +D TG I + LD+E ++ Y R
Sbjct: 277 ADEGTNADIRYRLQDEGTPFQMDPETGLITVREPLDFEARRQYSGR 322
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 74/162 (45%), Gaps = 23/162 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI----QDEGGL--- 82
G L+ + ATD D G G V + L + TD S F LDP + I ++E
Sbjct: 586 GTELLVLGATDGDLGDNGTVRFSLQEAETDQRS-FRLDPVSGRLSTISSLDREEQAFYSL 644
Query: 83 ------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
SS +N+ + DIND +P F + Y + E + G + + V ATD D
Sbjct: 645 LVLATDLGSPPQSSMVRINVSLLDINDNSPVFYPVQYFAHIQENEPGGSYITTVSATDPD 704
Query: 130 EGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G N + YS+ + F V+A +G I T ALD E++ Y
Sbjct: 705 LGLNGTIKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAY 746
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 79/172 (45%), Gaps = 33/172 (19%)
Query: 26 KH-ELGVTLMQVKATD-KDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------- 76
KH ++G L++V A D KD G VEY +L+ N F LD H G I
Sbjct: 2981 KHVKVGTKLIKVTAVDDKDFGLNSEVEYFILNEN--HLGKFKLD---NHTGWISVAAPLT 3035
Query: 77 -------------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAV 120
+D+G LSS ATV I VT+ N PEF ++PE G V
Sbjct: 3036 SDLNQNFLITVTAKDKGNPPLSSQATVQIIVTEENYHTPEFSQSHMSATIPESHSVGAIV 3095
Query: 121 GRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V A D D N ++ YS+ E+ F ++++TG + KALDYE Q +
Sbjct: 3096 RTVSARDRDTAMNGLIRYSISSGNEEGIFAINSSTGVLTLAKALDYELCQKH 3147
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 70/157 (44%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +ATD DSG +EY LL+ + + +D G + D
Sbjct: 2056 VFKAQATDPDSGPNSYIEYTLLNPLGNKFTIGTIDGEVRLTGELDREEVSNYTLTVVATD 2115
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y+ + E G + +V A D DEG N
Sbjct: 2116 KGHPSLSSSTEVVVMVLDINDNNPVFAQAMYKVEINENTLTGTDIIQVFAADGDEGTNGQ 2175
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y + + + F +D+ TG I K LD EK Y
Sbjct: 2176 VRYGIVDGNANQEFRIDSVTGAITVAKPLDREKTPTY 2212
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 71/157 (45%), Gaps = 22/157 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP---------------- 75
T++QV A D D G + Y L N D A F L + E Q
Sbjct: 2265 TVLQVVARDDDQGSNSKLSYVLFGGNEDNA--FTLSASGELQVTQSLDRETKEHFVLLIT 2322
Query: 76 IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQ 132
D G L+ T T+N+ V DIND P F S Y ++PE G V V+A+D D
Sbjct: 2323 ATDSGFPALTGTGTINVIVDDINDNVPTFASKMYFTTIPEDAPTGTDVILVNASDIDAST 2382
Query: 133 NAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
NAV+ + + F ++ +TG I T+ LD E ++ Y
Sbjct: 2383 NAVIRI-IGGNSQFTINPSTGQIITSALLDRETKENY 2418
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 76/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G + +G L
Sbjct: 3197 GTTVIHLNATDADSGTNAVIAYTIQSSDSD---LFVIDPNT---GVVTTQGFLDFETKQS 3250
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S ATVNI++ N+ P F S Y F + E G VG V A+
Sbjct: 3251 YHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFAS 3310
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F ++ TG I + LD EK+ ERV L
Sbjct: 3311 DRDLGSDGEVHYLIFGNSRKKGFQINKKTGQIYVSGLLDREKE----ERVSL 3358
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 71/168 (42%), Gaps = 18/168 (10%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF---NLDPAT 70
D L Y + + +V+A DKDSG G + Y + + NT DA F L +
Sbjct: 984 DQLSYEVTLSESEPVNSRFFKVQAFDKDSGANGEIAYSIAEGNTGDAFGIFPDGQLYIKS 1043
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E +QD LS+T V + + D+ND P F S Y F E Q G
Sbjct: 1044 ELDRELQDRYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRPG 1103
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
VG+V A D D G N V YS P F + A +G+I D E
Sbjct: 1104 SFVGKVSAIDKDFGPNGEVRYSFEMVQPDFELHAISGEITNTHQFDRE 1151
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L ATV++ + DIND P+F Y+ ++ E L V RV A+D DEG N +++YSV
Sbjct: 1177 LKDQATVHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSV 1236
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E+ F +D+ +G + LDYE Y
Sbjct: 1237 IKGNEERQFAIDSTSGQVTLIGRLDYEATPAY 1268
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 82/172 (47%), Gaps = 30/172 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGPI--- 76
G ++QV A D D G G V Y ++D N A F +D P + P
Sbjct: 2157 GTDIIQVFAADGDEGTNGQVRYGIVDGN--ANQEFRIDSVTGAITVAKPLDREKTPTYSL 2214
Query: 77 ----QDEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDA 128
D G + T+TV+I + DIND P F+ PY +VPE L V +V A D
Sbjct: 2215 TVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVPENLGTLPRTVLQVVARDD 2274
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D+G N+ + Y + ED F + A +G+++ ++LD E ++ + V LI+
Sbjct: 2275 DQGSNSKLSYVLFGGNEDNAFTLSA-SGELQVTQSLDRETKEHF---VLLIT 2322
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 68/171 (39%), Gaps = 32/171 (18%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPATEHQGPIQ 77
+ + G ++ Q KA D D G G+V Y L N N + L P H G Q
Sbjct: 891 ENWQAGHSIFQAKAVDPDEGVNGMVVYSLKQNPKNLFTINEKNGNISLLGPLDVHAGSYQ 950
Query: 78 DE--------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
E LSS+ + + V D+ND P F L YE ++ E + +V A D
Sbjct: 951 IEILASDMGVPQLSSSFILTVYVHDVNDNPPVFDQLSYEVTLSESEPVNSRFFKVQAFDK 1010
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYL 170
D G N + YS+ E NTGD + LD E Q Y+
Sbjct: 1011 DSGANGEIAYSIAE-------GNTGDAFGIFPDGQLYIKSELDRELQDRYV 1054
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1711 AEVEITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTYTIISGA 1770
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ K LD E++ Y
Sbjct: 1771 DDSFRIDPESGDLIATKRLDRERRSKY 1797
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LSS+ +V + VTD+ND P FQ PY +P G V V TDAD G N+ ++YS+
Sbjct: 2433 LSSSTSVLVTVTDVNDNPPRFQHHPYVTHIPSPTLPGSFVFAVTVTDADIGPNSELHYSL 2492
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
G ++ + VNI V D+ND +P F Q++ V Q G ++ + A D DEG N +V Y
Sbjct: 858 GTVTGDSMVNITVKDLNDNSPHFLQAVESVNVVENWQAGHSIFQAKAVDPDEGVNGMVVY 917
Query: 139 SV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
S+ P+++ F ++ G+I LD +E
Sbjct: 918 SLKQNPKNL-FTINEKNGNISLLGPLDVHAGSYQIE 952
Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV- 140
SS ++I V D+ND P F+ P+ + E + V A D D G N + Y +
Sbjct: 2636 FSSYEKLDITVLDVNDNPPVFKEDPFISEILENLSPRKILTVSAVDKDSGPNGQLDYEII 2695
Query: 141 --PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
++ F ++ TG+IR+ + LD EK Y+
Sbjct: 2696 NGNKEHSFSINHATGEIRSIRPLDREKISQYV 2727
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 70/173 (40%), Gaps = 25/173 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNN----------TDAASYFNLDP 68
LG T++ TD D G + Y + +D N ++ S++NL
Sbjct: 1946 LGSTVLVFNVTDADDGINSQLAYSIASGDSLGQFTVDKNGVLKVLKPLDRESQSFYNL-V 2004
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
H P +STA ++I + D+ND P F S P +PE V + ATD
Sbjct: 2005 VQVHDLPQLPASRFTSTAQISIILLDVNDNPPTFLS-PKLTYIPENTPIDTIVFKAQATD 2063
Query: 128 ADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
D G N+ + Y++ P F + G++R LD E+ Y V K
Sbjct: 2064 PDSGPNSYIEYTLLNPLGNKFTIGTIDGEVRLTGELDREEVSNYTLTVVATDK 2116
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N V Y + +
Sbjct: 1502 VTILVTDLNDNVPVFISQNALAADPSAVIGSVLTTIMAADPDEGANGEVEYEIINGDTDT 1561
Query: 146 FVVDANTGDIRTNKAL 161
F+VD +GD+R AL
Sbjct: 1562 FIVDRYSGDLRVASAL 1577
Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG + Y + N F++ P T E Q
Sbjct: 1316 RIGELVSSVTATDSDSGDNADLHYSITGTNNHGT--FSISPNTGSIFLAKKLDFETQSLY 1373
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G SST +V I V D ND P F S+ E G +V V A D
Sbjct: 1374 KLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPTFPPGDIFKSIVENIPIGTSVISVTAHD 1433
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + Y++ + +P F +D G I TN +D E L+
Sbjct: 1434 PDADINGQLSYAIIQQMPRGNHFGIDEVKGTIYTNAEIDREFANLF 1479
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 70/173 (40%), Gaps = 23/173 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EH 72
S Y A + +G +++QV A D D G + YRL D T F +DP T
Sbjct: 252 SSHYQAGVPEDAAVGSSVLQVAAADADEGTNADIRYRLQDEGTP----FQMDPETGLITV 307
Query: 73 QGPIQDEG--GLSSTATVNIRVTDINDKNP--EFQSLP----YEFSVPEGQDGLAVGRVH 124
+ P+ E S A I++ D+ND +P +F+ P Y Q G V +
Sbjct: 308 REPLDFEARRQYSGRAEALIQLLDVNDNDPVVKFRYFPATSRYASVDENAQVGTVVALLT 367
Query: 125 ATDADE----GQNAVVYYSVPEDIPFVVDA----NTGDIRTNKALDYEKQQLY 169
TDAD G +V E F V + N I+ ALD E+ Y
Sbjct: 368 VTDADSPAANGNISVQILGGNEQRHFEVQSSKVPNLSLIKVASALDRERIPSY 420
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 67/174 (38%), Gaps = 20/174 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G ++Y + + ++ LD
Sbjct: 681 YFAHIQENEPGGSYITTVSATDPDLGLNGTIKYSISAGDRSRFQVNAQSGVISTRMALDR 740
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V I V D D P F Y F V E G VG
Sbjct: 741 EEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAYSFVVFENVALGYHVG 800
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A+ D N + Y D F ++ TG + T +D E+Q Y +V
Sbjct: 801 SVSASTMDLNSN-ISYLITTGDQKGMFAINQVTGQLTTASVIDREEQSFYQLKV 853
>gi|348514704|ref|XP_003444880.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3-like
[Oreochromis niloticus]
Length = 3519
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 87/183 (47%), Gaps = 30/183 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL-DNNTDAASYFNLDPAT------- 70
Y R+ E G ++Q++ATD DS + YR + D+ T A + F +DP +
Sbjct: 605 YRETIRENVEEGYPILQLRATDSDSPSNANIRYRFVGDSATMARAAFEIDPRSGLITTRG 664
Query: 71 -------EH---------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
EH QG +D G S+T V I V D ND P+F Y +V E
Sbjct: 665 SVDRETNEHYTLQVEASDQG--KDPGPRSATVKVFITVLDENDNVPQFSEKRYVVAVKEN 722
Query: 115 -QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYL 170
+ + RV ATD D+ NAVV+Y++ F +D+ TG+I+ LDYE ++ Y
Sbjct: 723 VRPHSEILRVSATDRDKDSNAVVHYNIISGNSRGQFSIDSVTGEIQVVAPLDYEAEREYT 782
Query: 171 ERV 173
RV
Sbjct: 783 LRV 785
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 26/162 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQ--GPI------------- 76
+++V ATD+D +V Y ++ N+ F++D T E Q P+
Sbjct: 729 ILRVSATDRDKDSNAVVHYNIISGNSRGQ--FSIDSVTGEIQVVAPLDYEAEREYTLRVR 786
Query: 77 -QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
QD G ++T V+++VTD+ND P F S P++ SV E G ++ + A D D G
Sbjct: 787 AQDNGRPPLSNNTGIVSVQVTDVNDNPPIFVSTPFQASVLESAPIGSSILHIQAIDTDSG 846
Query: 132 QNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + D PFV++A TG + LD E + Y
Sbjct: 847 DNARLEYRLTGTSSDTPFVINAATGWVTVKSILDRESVEHYF 888
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
L T V+I +TD N P FQS Y SV E Q G + + ATD D G+NA + Y +
Sbjct: 1003 LHDTCQVHINITDANTHRPVFQSAHYSVSVNEDQPPGSTIVVISATDDDVGENARITYFL 1062
Query: 141 PEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
++IP F +D TG I LDYE Q Y
Sbjct: 1063 EDNIPQFRIDPATGAITLQAELDYEDQMTY 1092
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 24/162 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQG 74
+++Q+ ATD+D+ G V+Y N D F ++P + E
Sbjct: 1144 SILQISATDRDAHANGRVQY-TFQNGEDGGGDFTIEPKSGIVRNSRRLDRENVPFYELTA 1202
Query: 75 PIQDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G S V+I+VT D+ND P F + +E V E G V ++ ATD DEG
Sbjct: 1203 YAVDRGVPSQQTPVHIQVTVLDVNDNAPVFPADDFEVLVKENSAVGSVVAQITATDPDEG 1262
Query: 132 QNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ + LDYE + Y+
Sbjct: 1263 ANAQIMYQIVEGNIPEIFQMDIFSGELTSLIDLDYETRNEYV 1304
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 37/176 (21%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDP-------------------- 68
G +++ + A+D D G G + Y + N+ ++ YF++ P
Sbjct: 508 GTSVIIMSASDPDGGDAGRLSYTMAPLMNSRSSDYFHIHPDTGLITSTQILDREHMDLHY 567
Query: 69 ----ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRV 123
AT+H P LS T V+I V+D ND +P F+ Y ++ E ++G + ++
Sbjct: 568 FRVTATDHGSPR-----LSGTTMVSITVSDRNDHSPIFEQSEYRETIRENVEEGYPILQL 622
Query: 124 HATDADEGQNAVVYYSVPED------IPFVVDANTGDIRTNKALDYEKQQLYLERV 173
ATD+D NA + Y D F +D +G I T ++D E + Y +V
Sbjct: 623 RATDSDSPSNANIRYRFVGDSATMARAAFEIDPRSGLITTRGSVDRETNEHYTLQV 678
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 74/181 (40%), Gaps = 34/181 (18%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
S Y + G T++ + ATD D G+ + Y L DN F +DPAT G
Sbjct: 1025 SAHYSVSVNEDQPPGSTIVVISATDDDVGENARITYFLEDN----IPQFRIDPAT---GA 1077
Query: 76 IQDEGGL----------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
I + L S T V + V D+ND P+F S Y+ +V E
Sbjct: 1078 ITLQAELDYEDQMTYTLAITAKDNGIPQKSDTTYVEVNVNDVNDNAPQFLSPRYQGTVSE 1137
Query: 114 GQDG-LAVGRVHATDADEGQNAVVYYSVP--EDIP--FVVDANTGDIRTNKALDYEKQQL 168
++ ++ ATD D N V Y+ ED F ++ +G +R ++ LD E
Sbjct: 1138 DAPSYTSILQISATDRDAHANGRVQYTFQNGEDGGGDFTIEPKSGIVRNSRRLDRENVPF 1197
Query: 169 Y 169
Y
Sbjct: 1198 Y 1198
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 56/131 (42%), Gaps = 22/131 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGG------- 81
+G +++ ++A D DSG +EYRL ++D N I D
Sbjct: 831 IGSSILHIQAIDTDSGDNARLEYRLTGTSSDTPFVINAATGWVTVKSILDRESVEHYFFG 890
Query: 82 ----------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR--VHATDAD 129
LS+TA+V I V D+ND PEF L E+ V +D AVG V T D
Sbjct: 891 VEARDYGMPPLSATASVTITVMDVNDNRPEF--LQKEYYVRLNEDA-AVGTSVVTVTAVD 947
Query: 130 EGQNAVVYYSV 140
N+ V Y +
Sbjct: 948 RDVNSAVTYQI 958
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 32/173 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLD 67
+ + ++ +G + Q+ ATD D G + Y++++ N + S +LD
Sbjct: 1237 FEVLVKENSAVGSVVAQITATDPDEGANAQIMYQIVEGNIPEIFQMDIFSGELTSLIDLD 1296
Query: 68 PATEHQGPI---QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQ 115
T ++ I L S ATV IR+ D ND P Q F S P G
Sbjct: 1297 YETRNEYVIVVQATSAPLVSRATVRIRLVDQNDNRPTLQDFQIIFNNFVSNRSNSFPTG- 1355
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEK 165
+GRV A D D +YY++ E +++ +G+IR ++ LD +
Sbjct: 1356 ---VIGRVPAHDPDVSDR--LYYTIDRGNELHLLLLNHTSGEIRLSRKLDNNR 1403
>gi|321476878|gb|EFX87838.1| hypothetical protein DAPPUDRAFT_311854 [Daphnia pulex]
Length = 3133
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 85/181 (46%), Gaps = 34/181 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSG-----------------------KFGLVEYRL-L 54
Y ++ +G ++ V+A D+D+G K G++ RL L
Sbjct: 416 YETSIKESASIGTAVLTVRAKDQDAGANADVHYSIVNPFGANEAFRIDAKTGVISTRLAL 475
Query: 55 DNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
D T+ +NL QGP+Q+ S+TA V+++V D ND P+F Y V E
Sbjct: 476 DRETNGQ--YNLTIQAVDQGPVQERQ--SATAMVHVQVGDENDNYPQFSERTYTVDVAEN 531
Query: 115 QDGL---AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQL 168
+ V R+ ATDAD G NAV+ YS+ FV+D+ +GD+ + LD+E +
Sbjct: 532 VNWAENPIVARIRATDADVGPNAVLRYSLIGGNTQGHFVIDSLSGDVAVVQPLDFETVRS 591
Query: 169 Y 169
Y
Sbjct: 592 Y 592
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 80/173 (46%), Gaps = 33/173 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-- 76
Y A + +G T++ V A+D D G + Y L + + F++ PAT G I
Sbjct: 837 YSATVFEDAPIGTTVLIVAASDGDVGDNARITYGL---SGELVPEFSIQPAT---GAIIT 890
Query: 77 ------------------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
+D G LS T V I + D+ND P FQ Y +VPE
Sbjct: 891 TKQLDRERTSGYLLTITARDNGNPPLSDTTDVEISLGDVNDNLPVFQQTMYTANVPEDAL 950
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYE 164
G +V +V ATDAD+G N V Y + D PF +DA +G +RTNK LD E
Sbjct: 951 IGTSVLQVTATDADQGFNGRVRYVLLDADTNDSPFTLDATSGILRTNKLLDRE 1003
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
S+TATV I V D ND P F+ YE S+ E G AV V A D D G NA V+YS+
Sbjct: 392 SATATVQINVEDRNDFAPTFEQPSYETSIKESASIGTAVLTVRAKDQDAGANADVHYSIV 451
Query: 142 EDI----PFVVDANTGDIRTNKALDYEKQQLY 169
F +DA TG I T ALD E Y
Sbjct: 452 NPFGANEAFRIDAKTGVISTRLALDRETNGQY 483
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG S TATV + V+D N P F++ PY +V E G V V A+D D G NA +
Sbjct: 808 DSGGRSDTATVYLNVSDANTHAPAFEAAPYSATVFEDAPIGTTVLIVAASDGDVGDNARI 867
Query: 137 YYSVP-EDIP-FVVDANTGDIRTNKALDYEKQQLYL 170
Y + E +P F + TG I T K LD E+ YL
Sbjct: 868 TYGLSGELVPEFSIQPATGAIITTKQLDRERTSGYL 903
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 78/178 (43%), Gaps = 32/178 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + +G +++QV ATD D G G V Y LLD +T+ S F LD +
Sbjct: 940 MYTANVPEDALIGTSVLQVTATDADQGFNGRVRYVLLDADTN-DSPFTLDATSGILRTNK 998
Query: 71 --------EHQGPIQ--DEGG--LSSTATVNIRVTDINDKNPEFQSLPYE-----FSVPE 113
++ +Q D G LS A+V++ + D+ND P F P F
Sbjct: 999 LLDRELVAKYDLLVQAIDRGTPELSGAASVSVIIDDVNDSPPSFNIPPSSDRVRLFIQEN 1058
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSV-----PEDIPFVVDANTG--DIRTNKALDYE 164
G VG + A D DEG NA+V YS+ E V +G ++ T LDYE
Sbjct: 1059 SPVGSKVGDILARDPDEGVNAIVQYSIIGGQDAEAFTLVPRPESGLAELLTRIELDYE 1116
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 25/158 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
+ +++ATD D G ++ Y L+ NT +F +D + +Q
Sbjct: 540 VARIRATDADVGPNAVLRYSLIGGNTQG--HFVIDSLSGDVAVVQPLDFETVRSYRLVIR 597
Query: 78 -DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
+GG S+T + + V D+ND P F + ++ SV E G ++ RV A DAD+
Sbjct: 598 AQDGGNPSRSNTTQLLVNVRDVNDNAPRFYTSLFQESVIENVPVGHSIVRVQAYDADDAD 657
Query: 133 NAVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQ 167
NA++ Y + D +PF +D +TG I T + LD E+
Sbjct: 658 NALISYRIQMDEDQLPFGIDPDTGWIVTVRDLDREENH 695
>gi|431892571|gb|ELK03004.1| Protocadherin alpha-2 [Pteropus alecto]
Length = 824
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 72/144 (50%), Gaps = 13/144 (9%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRV 92
+ ++ D S LV + LD + S FNL G + L+ T + I+V
Sbjct: 179 FLDIQTNDDLSQSLSLVLKKSLDR--EEISGFNLLLVATDGGKPE----LTGTVQLLIKV 232
Query: 93 TDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP------ 145
D+ND P F Y+ + E +G V R+++TDADEG N+ + YS D+P
Sbjct: 233 LDVNDNEPTFDQSVYKVQLLENAANGTLVIRLNSTDADEGSNSEIVYSFSSDVPSTIKTK 292
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +D +TGDIRT LDYE+ + Y
Sbjct: 293 FKIDPSTGDIRTKGHLDYEETKSY 316
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 76/176 (43%), Gaps = 36/176 (20%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRL-------------------LDNNTDAASYF 64
R+ LG + + +D+DSG G V + LD+ D S
Sbjct: 360 REDAPLGTVIALIMVSDRDSGDNGQVTCTMTPNAPFKLVSTFKNYYSLVLDSTLDRESVA 419
Query: 65 NLDPATEHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAV 120
N + + +GG LS+TA+V + V D+ND PEF Y V E G +
Sbjct: 420 NYELVVTAR-----DGGSPSLSATASVTVEVADVNDNAPEFAQPEYTVFVKENNPPGCHI 474
Query: 121 GRVHATDADEGQNAVVYYSVPED-------IPFV-VDANTGDIRTNKALDYEKQQL 168
V A DAD +NA+V YS+ E +V V A +G + + LD+E+ +L
Sbjct: 475 FTVSARDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYALQPLDHEELEL 530
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 71/189 (37%), Gaps = 48/189 (25%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------------NTDAASYFN 65
Y ++ + G + V A D D+ + LV Y L++ + ++ +
Sbjct: 460 YTVFVKENNPPGCHIFTVSARDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYA 519
Query: 66 LDPA-------TEHQGPIQDEG--GLSSTATVNIRVTDINDKNPEF-------------- 102
L P + Q +D G L S T+ + V D ND P
Sbjct: 520 LQPLDHEELELLQFQVSARDSGVPPLGSNVTLQVFVLDENDNAPALLPPGSGRLPPGAGS 579
Query: 103 ----QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV-PE----DIPFVVDANTG 153
S P SV G V +V A DAD G NA + Y + PE PF V TG
Sbjct: 580 GGGVVSQPVARSVGAGH---VVAKVRAVDADSGYNAWLSYELRPEAGGAHSPFRVGLYTG 636
Query: 154 DIRTNKALD 162
+I T +ALD
Sbjct: 637 EISTTRALD 645
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 62/163 (38%), Gaps = 33/163 (20%)
Query: 11 EMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL-DNNTDAASYFNLDPA 69
E T D Y + G ++++ +TD D G + Y D + + F +DP+
Sbjct: 239 EPTFDQSVYKVQLLENAANGTLVIRLNSTDADEGSNSEIVYSFSSDVPSTIKTKFKIDPS 298
Query: 70 TEHQGPIQDEGGL----------------------SSTATVNIRVTDINDKNPEFQ---- 103
T G I+ +G L S +++++ DIND PE
Sbjct: 299 T---GDIRTKGHLDYEETKSYEIQVIAYDNGTPSMSGHCKISVKLVDINDNTPEVSITSL 355
Query: 104 SLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDIPF 146
SLP P G + + +D D G N V ++ + PF
Sbjct: 356 SLPIREDAPLGT---VIALIMVSDRDSGDNGQVTCTMTPNAPF 395
>gi|354473662|ref|XP_003499052.1| PREDICTED: cadherin-8-like isoform 1 [Cricetulus griseus]
Length = 799
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 86/185 (46%), Gaps = 31/185 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + LG ++ V ATD D +G +L+ + + YF+++P T
Sbjct: 172 YHATVPEMSILGTSVTNVTATDADDPVYG-NSAKLVYSILEGQPYFSIEPETAIIKTALP 230
Query: 71 --------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
E+ IQ + GGLS T T+ + +TD+ND P+F Y FSVPE
Sbjct: 231 NMDREAKEEYLVVIQAKDMGGHSGGLSGTTTLPVTLTDVNDNPPKFAQSLYHFSVPEDVV 290
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQL 168
G A+GRV A D D G+NA Y + + +I A G IR K LD+E ++
Sbjct: 291 LGTAIGRVKANDQDIGENAQSSYDIIDGDGTALFEITSDAQAQDGVIRLRKPLDFETKKS 350
Query: 169 YLERV 173
Y +V
Sbjct: 351 YTLKV 355
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND PEF + PY +VPE G +V V ATDAD+ G +A + YS+ E P
Sbjct: 155 IKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEGQP 214
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLYL 170
F ++ T I+T +D E ++ YL
Sbjct: 215 YFSIEPETAIIKTALPNMDREAKEEYL 241
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNA--VVYYSVP 141
S V I+V D+ND PEF + F G+ G + V A D D+ +N +Y +P
Sbjct: 478 SRVPVAIKVLDVNDNAPEFAAEYEAFLCENGKPGQVIQTVSAMDKDDPKNGHYFLYSLLP 537
Query: 142 EDI---PFVVDANTGD----IRTNKALDYEKQQLYL 170
E + F + N + + + + +KQ++YL
Sbjct: 538 EMVNNPNFTIKKNEDNSLSILAKHNGFNRQKQEVYL 573
>gi|297461475|ref|XP_001249786.2| PREDICTED: protocadherin Fat 4 [Bos taurus]
gi|297484612|ref|XP_002694439.1| PREDICTED: protocadherin Fat 4 [Bos taurus]
gi|296478713|tpg|DAA20828.1| TPA: fat-like [Bos taurus]
Length = 4981
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F +DP + E +
Sbjct: 1756 GSKIMQLTAMDADEGANALVTYTIISGADDS---FRIDPESGDLIATKRLDRERRSKYSL 1812
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G SS +NI V+D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1813 LVRADDGLQSSDMRINITVSDVNDHTPKFSRPVYSFDIPEDTTPGSLVAAILATDDDSGV 1872
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG + LDYE QQ Y+ V
Sbjct: 1873 NGEITYIVNEDDEDGIFFLNPVTGVFNLTRMLDYETQQYYILTV 1916
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 26/172 (15%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL+ Y + N + A + +
Sbjct: 3096 ATIPESHSVGAIVRTVSARDRDTAMNGLIRYSISSGNEEGIFAINSSTGVLTLAKALDYE 3155
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEF---SVPEGQDGLAV 120
+H+ + D G +S T +V + V D+ND +P F LP E+ + G V
Sbjct: 3156 LCQKHEMTVSATDGGWVSRTGYCSVTVNVIDVNDNSPVF--LPDEYFPTVLENAPSGTTV 3213
Query: 121 GRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y++ D+ FV+D NTG + T LD+E +Q Y
Sbjct: 3214 IHLNATDADSGTNAVIAYTIQSSDSDL-FVIDPNTGVVTTQGFLDFETKQSY 3264
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 24/162 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V A DKDSG G ++Y +++ N + + F+++ AT I+
Sbjct: 2687 ILTVSAVDKDSGPNGQLDYEIINGNKEHS--FSINHATGEIRSIRPLDREKISQYVLIVK 2744
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D G S + +V I + D ND P F + + VPE G V RV +D D G
Sbjct: 2745 SSDRGSPSQSTSVKVIINILDENDNAPRFSQI-FSAHVPENSPLGYTVTRVTTSDEDIGV 2803
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA+ YS+ + +PF ++ +TGDI ++ L+ E Y RV
Sbjct: 2804 NAISRYSIMDTSLPFTINPSTGDIVISRPLNREDTDRYRIRV 2845
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 22/168 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y ++D + F ++P+T
Sbjct: 2774 SQIFSAHVPENSPLGYTVTRVTTSDEDIGVNAISRYSIMDTSLP----FTINPSTGDIVI 2829
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V I VTD+ND P F Y PE + G
Sbjct: 2830 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPELTEIGS 2889
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
V +V ATD DEG N V+Y + F ++A+TG+I + L Y+
Sbjct: 2890 KVTQVSATDPDEGSNGQVFYFIKSQSEYFRINASTGEIFNKQVLKYQN 2937
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 75/173 (43%), Gaps = 21/173 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN------TDAASY-------- 63
FY A + +++V A+D D G GL+ Y ++ N D+ S
Sbjct: 1214 FYQATISESAANLTQVLRVSASDVDEGSNGLIHYSVIKGNEERQFAIDSTSGQVTLIGRL 1273
Query: 64 -FNLDPATEHQGPIQDEGGLS--STATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
+ PA D G +S ST T+NI + D ND P F V E + G
Sbjct: 1274 DYEATPAYSLVIQAVDSGAVSLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGEL 1333
Query: 120 VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD+D G NA ++YS+ F + NTG I K LD+E Q LY
Sbjct: 1334 VSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSIFLAKKLDFETQSLY 1386
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 71/157 (45%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +ATD DSG +EY LL+ + + + +D G + D
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNPSGNKFTIGTIDGEVRLTGELDREEVSNYTLTVVATD 2128
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y+ + E G + +V A D DEG N
Sbjct: 2129 KGHPSLSSSTEVVVMVLDINDNNPVFAQAMYKVEINENTLTGTDITQVFAADGDEGTNGQ 2188
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y + + + F +D+ TG I K LD EK Y
Sbjct: 2189 VRYGIVDGNANQEFRIDSVTGAITVAKPLDREKTPTY 2225
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 38 ATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGGLSSTAT--- 87
ATD D G G+ YR++ N A F LD G + +GGL T
Sbjct: 159 ATDSDIGSNGVDHRSYRIIQGN--EAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQY 216
Query: 88 -------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
VN+ V DIND P F S Y+ VPE G +V +V A D
Sbjct: 217 QLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAAVGSSVLQVAAAD 276
Query: 128 ADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ADEG NA + Y + E PF +D TG I + LD+E ++ Y
Sbjct: 277 ADEGTNADIRYRLQDEGTPFQMDPETGLITVREPLDFEARRQY 319
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 73/162 (45%), Gaps = 23/162 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------------ 77
G L+ + ATD D G G V + L + TD S F LDP + I
Sbjct: 599 GTELLVLGATDGDLGDNGTVRFSLQEAETDQRS-FRLDPVSGRLSTISSLDREEQAFYSL 657
Query: 78 -----DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
D G SS +N+ + DIND +P F + Y + E + G + + V ATD D
Sbjct: 658 LVLATDMGSPPQSSMVRINVSLLDINDNSPVFYPVQYFAHIQENEPGGSYITTVSATDPD 717
Query: 130 EGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G N + YS+ + F V+A +G I T ALD E++ Y
Sbjct: 718 LGLNGTIKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAY 759
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 79/172 (45%), Gaps = 33/172 (19%)
Query: 26 KH-ELGVTLMQVKATD-KDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------- 76
KH ++G L++V A D KD G VEY +L+ N F LD H G I
Sbjct: 2994 KHVKVGTKLIKVTAVDDKDFGLNSEVEYFILNEN--HLGKFKLD---NHTGWISVAAPLT 3048
Query: 77 -------------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAV 120
+D+G LSS ATV I VT+ N PEF ++PE G V
Sbjct: 3049 SDLNQNFLITVTAKDKGNPPLSSQATVQIIVTEENYHTPEFSQSHMSATIPESHSVGAIV 3108
Query: 121 GRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V A D D N ++ YS+ E+ F ++++TG + KALDYE Q +
Sbjct: 3109 RTVSARDRDTAMNGLIRYSISSGNEEGIFAINSSTGVLTLAKALDYELCQKH 3160
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 72/155 (46%), Gaps = 18/155 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI----Q 77
T++QV A D D G + Y L N D A + LD T+ +
Sbjct: 2278 TVLQVVARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELRVTQSLDRETKEHFVLLITAT 2337
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNA 134
D G L+ T T+N+ V DIND P F S Y ++PE G V V+A+D D NA
Sbjct: 2338 DSGFPALTGTGTINVIVDDINDNVPTFASKMYFTTIPEDAPTGTDVILVNASDIDASTNA 2397
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V+ + + F ++ +TG I T+ LD E ++ Y
Sbjct: 2398 VIRI-IGGNSQFTINPSTGQIITSALLDRETKENY 2431
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 76/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G + +G L
Sbjct: 3210 GTTVIHLNATDADSGTNAVIAYTIQSSDSD---LFVIDPNT---GVVTTQGFLDFETKQS 3263
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S ATVNI++ N+ P F S Y F + E G VG V A+
Sbjct: 3264 YHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEISEAAPTGTIVGEVFAS 3323
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F ++ TG I + LD EK+ ERV L
Sbjct: 3324 DRDLGSDGEVHYLIFGNSRKKGFQINKKTGQIYVSGLLDREKE----ERVSL 3371
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L ATV++ + DIND P+F Y+ ++ E L V RV A+D DEG N +++YSV
Sbjct: 1190 LKDQATVHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGSNGLIHYSV 1249
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E+ F +D+ +G + LDYE Y
Sbjct: 1250 IKGNEERQFAIDSTSGQVTLIGRLDYEATPAY 1281
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 81/172 (47%), Gaps = 30/172 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGPI--- 76
G + QV A D D G G V Y ++D N A F +D P + P
Sbjct: 2170 GTDITQVFAADGDEGTNGQVRYGIVDGN--ANQEFRIDSVTGAITVAKPLDREKTPTYSL 2227
Query: 77 ----QDEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDA 128
D G + T+T++I + DIND P F+ PY +VPE L V +V A D
Sbjct: 2228 TVQATDRGSTPRTDTSTISIVLLDINDFVPIFELSPYSVNVPENLGTLPRTVLQVVARDD 2287
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D+G N+ + Y + ED F + A +G++R ++LD E ++ + V LI+
Sbjct: 2288 DQGSNSKLSYVLFGGNEDNAFTLSA-SGELRVTQSLDRETKEHF---VLLIT 2335
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 70/168 (41%), Gaps = 18/168 (10%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF---NLDPAT 70
D L Y + + +V+A DKDSG G + Y + + NT DA F L +
Sbjct: 997 DQLSYEVTLSESEPVNSRFFKVQAFDKDSGANGEIAYSIAEGNTGDAFGIFPDGQLYIKS 1056
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E +QD LS+T V + + D+ND P F S Y F E Q G
Sbjct: 1057 ELDRELQDRYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRPG 1116
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
VG+V A D D G N V YS P F + +G+I D E
Sbjct: 1117 SFVGKVSAIDKDFGPNGEVRYSFEMVQPDFELHTISGEITNTHQFDRE 1164
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1724 AEVEITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTYTIISGA 1783
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ K LD E++ Y
Sbjct: 1784 DDSFRIDPESGDLIATKRLDRERRSKY 1810
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 68/171 (39%), Gaps = 32/171 (18%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPATEHQGPIQ 77
+ + G ++ Q KA D D G G+V Y L N N + L P H G Q
Sbjct: 904 ENWQAGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFTINERNGNISLLGPLDVHAGSYQ 963
Query: 78 DE--------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
E LSS+ + + V D+ND P F L YE ++ E + +V A D
Sbjct: 964 IEILASDMGVPQLSSSFILTVYVHDVNDNPPVFDQLSYEVTLSESEPVNSRFFKVQAFDK 1023
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYL 170
D G N + YS+ E NTGD + LD E Q Y+
Sbjct: 1024 DSGANGEIAYSIAE-------GNTGDAFGIFPDGQLYIKSELDRELQDRYV 1067
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LSS+ +V + VTD+ND P FQ PY +P G V V TDAD G N+ ++YS+
Sbjct: 2446 LSSSTSVLVTVTDVNDNPPRFQHHPYVTHIPSPTPPGSFVFAVTVTDADIGPNSELHYSL 2505
Query: 141 P--EDIPFVVDANTGDIRTNKALD 162
F +D G I AL+
Sbjct: 2506 SGRNSEKFHIDTLRGAIMAAGALN 2529
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
G ++ + VNI V D+ND +P F Q++ V Q G ++ + A D DEG N +V Y
Sbjct: 871 GTVTGDSMVNITVKDLNDNSPHFLQAVESVNVVENWQAGHSIFQAKAVDPDEGVNGMVLY 930
Query: 139 SV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
S+ P+++ F ++ G+I LD +E
Sbjct: 931 SLKQNPKNL-FTINERNGNISLLGPLDVHAGSYQIE 965
Score = 42.4 bits (98), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV- 140
SS ++I V D+ND P F+ P+ + E + V A D D G N + Y +
Sbjct: 2649 FSSYEKLDITVLDVNDNPPVFKEDPFVSEILENLSPRKILTVSAVDKDSGPNGQLDYEII 2708
Query: 141 --PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
++ F ++ TG+IR+ + LD EK Y+
Sbjct: 2709 NGNKEHSFSINHATGEIRSIRPLDREKISQYV 2740
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 70/173 (40%), Gaps = 25/173 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNN----------TDAASYFNLDP 68
LG T++ TD D G + Y + +D N ++ S++NL
Sbjct: 1959 LGSTVLVFNVTDADDGINSQLAYSIASGDSLGQFTVDKNGVLKVLKPLDRESQSFYNL-V 2017
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
H P +STA ++I + D+ND P F S P +PE V + ATD
Sbjct: 2018 VQVHDLPQLPASRFTSTAQISIILLDVNDNPPTFLS-PKLTYIPENTPIDTIVFKAQATD 2076
Query: 128 ADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
D G N+ + Y++ P F + G++R LD E+ Y V K
Sbjct: 2077 PDSGPNSYIEYTLLNPSGNKFTIGTIDGEVRLTGELDREEVSNYTLTVVATDK 2129
Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N V Y + +
Sbjct: 1515 VTILVTDLNDNVPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEVEYEIVNGDTDT 1574
Query: 146 FVVDANTGDIRTNKAL 161
F+VD +GD+R AL
Sbjct: 1575 FIVDRYSGDLRVASAL 1590
Score = 39.3 bits (90), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG + Y + N F++ P T E Q
Sbjct: 1329 RIGELVSSVTATDSDSGDNADLHYSITGTNNHGT--FSISPNTGSIFLAKKLDFETQSLY 1386
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G SST +V I V D ND P F S+ E G +V V A D
Sbjct: 1387 KLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPTFPPGDIFKSIVENIPIGTSVISVTAHD 1446
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + Y++ + +P F +D G I TN +D E L+
Sbjct: 1447 PDADINGQLSYTIIQQMPRGNHFGIDEVKGTIYTNAEIDREFANLF 1492
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV 140
SS A++ I V DIND P F Y ++ E G V V ATD D G NA + YS+
Sbjct: 456 SSVASLVIFVNDINDHPPVFAQQVYRVNLSEEAPPGSYVSGVSATDGDSGLNANLRYSI 514
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 67/174 (38%), Gaps = 20/174 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G ++Y + + ++ LD
Sbjct: 694 YFAHIQENEPGGSYITTVSATDPDLGLNGTIKYSISAGDRSRFQVNAQSGVISTRMALDR 753
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V I V D D P F Y F V E G VG
Sbjct: 754 EEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAYSFVVFENVALGYHVG 813
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A+ D N + Y D F ++ TG + T +D E+Q Y +V
Sbjct: 814 SVSASTMDLNSN-ISYLITTGDQKGMFAINQVTGQLTTASVIDREEQSFYQLKV 866
>gi|432930213|ref|XP_004081376.1| PREDICTED: cadherin-7-like [Oryzias latipes]
Length = 792
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 82/171 (47%), Gaps = 32/171 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------------EHQ 73
G T+ QV ATD D FG +L+ + YF+++P T E+
Sbjct: 168 GTTVAQVTATDADDPMFG-NNAKLIYSILQGEPYFSVEPKTGIVVTSWPDLDRETRDEYL 226
Query: 74 GPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
IQ + GG SS+ T+ + +TD+ND P FQ Y F+VPE G VGR+ A
Sbjct: 227 VVIQVQDMLGLSGGYSSSTTLTVILTDVNDNGPTFQRQLYTFNVPENAAIGSTVGRIIAD 286
Query: 127 DADEGQNAVVYYSVPEDI----PFVVDAN----TGDIRTNKALDYEKQQLY 169
D D G NA + YS+ +D+ F++ + G + K LDYE ++ Y
Sbjct: 287 DGDIGINARMTYSLEDDLEESSTFIIKTDPVTQEGQLLLAKPLDYESKRRY 337
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
++V DIND P+FQ+ PY S+PE G V +V ATDAD+ G NA + YS+ + P
Sbjct: 140 VKVQDINDNVPQFQNEPYVSSIPEMSPAGTTVAQVTATDADDPMFGNNAKLIYSILQGEP 199
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLYL 170
F V+ TG + T+ LD E + YL
Sbjct: 200 YFSVEPKTGIVVTSWPDLDRETRDEYL 226
Score = 42.4 bits (98), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPED 143
+ + I V D+ D+ P F S YE+ VPE G VG + A D D N+ + YS+ +
Sbjct: 361 STAIKIVVRDV-DEPPAFVSPVYEWKVPENAAVGTVVGSISARDTDT-HNSPIRYSIDKR 418
Query: 144 I----PFVVDANTGDIRTNKALDYEKQQLY 169
F +DAN G I KALD E +
Sbjct: 419 SDATKSFRIDANNGTIAIVKALDRETSSWH 448
>gi|432092385|gb|ELK25000.1| Cadherin EGF LAG seven-pass G-type receptor 3 [Myotis davidii]
Length = 1240
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 84/176 (47%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGP 75
Y A R+ +++V ATD+D GLV Y ++ N+ +F +D T + P
Sbjct: 45 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRG--HFAIDSLTGEIQVVAP 102
Query: 76 I--------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ QD G ++T +I+V DIND P F S P++ SV E G
Sbjct: 103 LDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIFVSTPFQVSVLENAPLG 162
Query: 118 LAVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+V + A DAD G+NA + Y+ V D PFV+++ TG + + LD E + Y
Sbjct: 163 HSVIHIQAVDADHGENARLEYALTGVAPDTPFVINSATGWVSVSGPLDRESVEHYF 218
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 24/162 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPIQ---- 77
+++Q+ ATD+D+ G V+Y N D F ++P + P+
Sbjct: 474 SVLQISATDRDAHANGRVQY-TFQNGEDGDGDFTIEPTSGIVRSVRRLDREARPVYELTA 532
Query: 78 ---DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G L + ++ + V D+ND P F + +E V E G V ++ A D DEG
Sbjct: 533 YAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAADPDEG 592
Query: 132 QNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA V Y + E +IP F +D +G++ LDYE +Q Y+
Sbjct: 593 PNAHVMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYV 634
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS 139
L V+I +TD N P FQS Y SV E + G V + A+D D G+NA + Y
Sbjct: 332 ALQDHCYVHINITDANTHRPVFQSAHYSVSVNEDRPVGSTVVVISASDDDVGENARITYL 391
Query: 140 VPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+ + +P F +DA++G I LDYE Q Y
Sbjct: 392 LEDHLPQFRIDADSGAITLQAPLDYEDQVTY 422
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAV 135
Q+ G S+T V+I V D ND P+F Y V E + V RV ATD D+ N +
Sbjct: 15 QEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGL 74
Query: 136 VYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
V+Y++ F +D+ TG+I+ LD+E ++ Y R+
Sbjct: 75 VHYNIISGNSRGHFAIDSLTGEIQVVAPLDFEAEREYALRI 115
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 73/177 (41%), Gaps = 30/177 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGPI--------- 76
LG +++ ++A D D G+ +EY L D F ++ AT GP+
Sbjct: 161 LGHSVIHIQAVDADHGENARLEYALTGVAPDTP--FVINSATGWVSVSGPLDRESVEHYF 218
Query: 77 -----QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDA 128
+D G LSS+A+V + V D+ND PEF + Y + E G +V V A D
Sbjct: 219 FGVEARDHGSPALSSSASVTVTVLDVNDNRPEFTTKEYHLRLNEDAAVGTSVVSVTAVDR 278
Query: 129 DEGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
D N+ + Y + G + LDY KQ+ Y + V S A
Sbjct: 279 DA--NSAISYQITGGNTRNRFAISTQGGAGLVTLALPLDY-KQERYFKLVLTASDRA 332
Score = 42.4 bits (98), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 73/178 (41%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEH 72
S Y + +G T++ + A+D D G+ + Y L D+ F +D A
Sbjct: 355 SAHYSVSVNEDRPVGSTVVVISASDDDVGENARITYLLEDH----LPQFRIDADSGAITL 410
Query: 73 QGPIQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQD 116
Q P+ E ++ T + R V D+ND P+F + Y V E
Sbjct: 411 QAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAP 470
Query: 117 GL-AVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ++ ATD D N V Y+ D F ++ +G +R+ + LD E + +Y
Sbjct: 471 PFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRSVRRLDREARPVY 528
>gi|345328749|ref|XP_003431299.1| PREDICTED: protocadherin-23-like [Ornithorhynchus anatinus]
Length = 3433
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 74/161 (45%), Gaps = 31/161 (19%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP------IQD 78
+ ATD DSG+ G + Y LL + YF ++P+T EHQ + D
Sbjct: 1291 IAATDIDSGRNGQLSYFLLSD----GKYFKMNPSTGEIINWVALDHEHQVHHQLSVVVMD 1346
Query: 79 EGGLSSTATVN--IRVTDINDKNPEFQSLPYE----FSVPEGQDG-LAVGRVHATDADEG 131
G S ATV I VTD+ND P+F P E V EGQ + V V A D D G
Sbjct: 1347 HGTPSHNATVMAYISVTDLNDNKPQFPQFPPENEISIKVLEGQPADVFVTTVFAKDPDAG 1406
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
N V YS+ + F +D N+G+IRT L Y Q Y
Sbjct: 1407 NNGEVSYSISSEESLNHFKMDVNSGEIRTTTVLSYNHQPNY 1447
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 80/174 (45%), Gaps = 31/174 (17%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQDEG---- 80
E G + ++ A D D G+ G V Y LL N F LD + P+ E
Sbjct: 1710 EAGSLVHRIVAEDPDEGRNGKVTYHLLAGNEKET--FMLDRTSGLLTTTCPLDYEAQKYY 1767
Query: 81 ------------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
LS T T+ + V DIND+ P F+ L YE +VPE Q G V +V A D
Sbjct: 1768 ILTVLALDDGMPALSVTQTLTVTVLDINDEVPVFKKLSYEVTVPENQGPGQLVTKVEAMD 1827
Query: 128 ADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D G N+ + + + +P F +++NTG++ T + D E Q+ + RV +
Sbjct: 1828 RDSGINSELQFEI---MPGAFFELFQINSNTGEVVTTTSFDREVQETFTLRVLV 1878
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 69/154 (44%), Gaps = 36/154 (23%)
Query: 36 VKATDKDSGKFGLVEYRLLD--NNTDAASYFNLDPATEHQGPIQD--------------- 78
VKA+D D+G++G +EY L D +N + + F +DP T H QD
Sbjct: 722 VKASDADAGQYGQIEYFLYDGYHNYEKSHAFQIDPHTGHVCVSQDIDREGDPVTYDLLVK 781
Query: 79 ---------------EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGR 122
EGGLS+ A V++ V D+ND P F Y S+ Q G +
Sbjct: 782 AKDGVSHGISFLNCLEGGLSAQAFVHVEVEDVNDNQPVFNPTSYVTSISGHTQPGSEILN 841
Query: 123 VHATDADEGQNAVVYYS-VPEDIP--FVVDANTG 153
V A D D G V Y VP ++ F +D++TG
Sbjct: 842 VIARDKDSGMYGTVTYELVPGELSSLFTIDSSTG 875
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 74/161 (45%), Gaps = 24/161 (14%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ-----------------D 78
+ A D DSG G ++Y+++ N A YF L+ + P + D
Sbjct: 1927 ILAKDMDSGNNGAIQYKIIGGN--AEEYFALNHTSGELSPSRSLDREDVSNFTLIIEGCD 1984
Query: 79 EGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAV 135
G S ++T I+VT D ND +P F Y SV E + + + ATD DEG N
Sbjct: 1985 LGNPSRSSTTQIQVTILDDNDHSPAFPFPHYHVSVREDLEVDSVILTLSATDEDEGLNGQ 2044
Query: 136 VYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERVF 174
+ YS+ + F VD+ TG ++ +K+LD E Y RV
Sbjct: 2045 IIYSLGDAAAAAFTVDSVTGALKVSKSLDRETNSQYFFRVM 2085
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV--- 140
T I + D+ND +P F S+P +VPE + G V R+ A D DEG+N V Y +
Sbjct: 1680 TLAARILILDVNDNSPHFVSVPV-VNVPEDTEAGSLVHRIVAEDPDEGRNGKVTYHLLAG 1738
Query: 141 PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
E F++D +G + T LDYE Q+ Y+ V +
Sbjct: 1739 NEKETFMLDRTSGLLTTTCPLDYEAQKYYILTVLAL 1774
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 75/160 (46%), Gaps = 27/160 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNN---------------TDAASYFNLDPATEHQGPIQ 77
++QV A+D DSG G +EY +L N TDA NL AT ++ IQ
Sbjct: 2338 VLQVSASDMDSGLNGQIEYSILSGNLNDTFQIDSTSGVITTDAILDHNL--ATSNRLVIQ 2395
Query: 78 --DEG--GLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQ 132
D+G LS T+ V I+V DIN+ P F S P E + G V +V A D D
Sbjct: 2396 ATDKGLPSLSGTSVVVIQVVDINNNAPVFLPSDPVEVA-ENASPGYIVTQVSAYDVDLSP 2454
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
A+ + E P F +D TG I K+LD+E+ Y
Sbjct: 2455 -ALAFSFTKEGNPGTKFAIDPITGKIMLVKSLDFEETAEY 2493
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 29/171 (16%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASY------FNLDPATEHQGPIQ-------- 77
T+ + A D D+G +G + Y + + F++DP T P Q
Sbjct: 2866 TVCTINALDFDTGPYGHLTYSIQSSCLQDPGMPHDHEMFSIDPITGDVRPRQILDYESQS 2925
Query: 78 ---------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
D+G ++T TV + + ++ P F Y F +PE + G VG+V A+D
Sbjct: 2926 QYCFIVQAKDKGASTATLTVQVDIEGADEFEPVFTQDMYHFDLPEVTEIGHIVGKVAASD 2985
Query: 128 ADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERVFL 175
AD G++ +V Y + D P F V+ +G+I N L K + E + L
Sbjct: 2986 ADAGEDGIVLYFL--DTPSQFFSVNETSGNIYLNGPLLLGKNLMKDETIEL 3034
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 18/130 (13%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD------------AASYFNLDPATEHQGPI 76
+G ++ V ATD+D G+ G++ Y+++ + + A + +LD T Q I
Sbjct: 2539 VGSFVLAVSATDRDLGRSGVISYKIISSCEEFSIDLKNGSIFTAKTDMHLDKKTSFQCLI 2598
Query: 77 Q--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEG 131
+ D G L++ +V I +TD+N+ P F Y FSV E G + ATD D
Sbjct: 2599 EARDNGIPALTAITSVIIEITDVNNYAPAFTMTHYNFSVSEDAVIGSLLATFSATDHDRT 2658
Query: 132 -QNAVVYYSV 140
+N V YS+
Sbjct: 2659 RENTNVDYSI 2668
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 76/174 (43%), Gaps = 21/174 (12%)
Query: 10 LEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN---- 65
+ M+ Y + E G +++ V+A+ +S L YR+L N D + +
Sbjct: 2212 MGMSFSCSLYEGTVTENCEAGTSVVTVEASALNSRGSALT-YRILSGNEDGTFFLDTNTG 2270
Query: 66 ---------LDPATEHQGPI---QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
LD H+ + + + V + V D+ND P F+ Y+ SV E
Sbjct: 2271 ELTVKEPMFLDFEVRHEIHLLVLAENHEHRAHCKVRVLVQDMNDNIPSFEQSNYQASVWE 2330
Query: 114 GQDGLA-VGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDY 163
GQ A V +V A+D D G N + YS+ + F +D+ +G I T+ LD+
Sbjct: 2331 GQLYSAYVLQVSASDMDSGLNGQIEYSILSGNLNDTFQIDSTSGVITTDAILDH 2384
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
L++TAT+ I V D ND P F + + V E G + + A D D G N V Y++
Sbjct: 2724 LTATATIVISVLDTNDNPPVFPTPEHHAHVRENTLLGSPIAVISANDCDSGTNGEVTYTI 2783
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEK 165
E F VD TG + K+LDYE+
Sbjct: 2784 ISGNEKGCFHVDEKTGAVNLIKSLDYEE 2811
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 77/185 (41%), Gaps = 40/185 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
+ A R+ LG + + A D DSG G V Y ++ N F++D T I+
Sbjct: 2749 HHAHVRENTLLGSPIAVISANDCDSGTNGEVTYTIISGNEKGC--FHVDEKTGAVNLIKS 2806
Query: 78 ----------------DEGGLS-STATVNIRVTDINDKNPEF-----QSLPYEFSVPEGQ 115
DEG + + + + + V D ND P+F +S+ YE ++P
Sbjct: 2807 LDYEETTKFTLTVQASDEGSKNVAFSVIFVSVLDDNDHAPQFVLPVLKSVVYE-NLPSF- 2864
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV----------PEDIP-FVVDANTGDIRTNKALDYE 164
V ++A D D G + YS+ P D F +D TGD+R + LDYE
Sbjct: 2865 --FTVCTINALDFDTGPYGHLTYSIQSSCLQDPGMPHDHEMFSIDPITGDVRPRQILDYE 2922
Query: 165 KQQLY 169
Q Y
Sbjct: 2923 SQSQY 2927
Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 22/156 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLL-----------DNNTDAASYFNLDPATEH----QG 74
G + +V+A D+DSG +++ ++ N + + + D + +
Sbjct: 1817 GQLVTKVEAMDRDSGINSELQFEIMPGAFFELFQINSNTGEVVTTTSFDREVQETFTLRV 1876
Query: 75 PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQ 132
+QD G LSST T+ V D ND P F E +PE Q+ + + A D D G
Sbjct: 1877 LVQDGGIPPLSSTTTILCTVEDENDHAPRFILPIPEIHIPENQEPEIIYTILAKDMDSGN 1936
Query: 133 NAVVYYSV----PEDIPFVVDANTGDIRTNKALDYE 164
N + Y + E+ F ++ +G++ +++LD E
Sbjct: 1937 NGAIQYKIIGGNAEEY-FALNHTSGELSPSRSLDRE 1971
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPY-----EFSVPEGQDGLAVGRVHATDADEGQNA-VV 136
+++ +V + V D ND +P F Y E VP G +G + ATD D G+N +
Sbjct: 1250 NTSTSVVVHVLDENDNSPAFLQEVYFWKVEERPVPHG----VIGIIAATDIDSGRNGQLS 1305
Query: 137 YYSVPEDIPFVVDANTGDIRTNKALDYEKQ 166
Y+ + + F ++ +TG+I ALD+E Q
Sbjct: 1306 YFLLSDGKYFKMNPSTGEIINWVALDHEHQ 1335
Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 15/125 (12%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTAT-VNIRVTDIN 96
A D +GK LV+ + + E++ IQ + T T + ++V D+N
Sbjct: 2471 AIDPITGKIMLVKS------------LDFEETAEYELQIQASDSVHHTETAIRVQVLDVN 2518
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI-PFVVDANTGD 154
D PEF Y+ ++ E G V V ATD D G++ V+ Y + F +D G
Sbjct: 2519 DNPPEFVQDSYQVTISELTPVGSFVLAVSATDRDLGRSGVISYKIISSCEEFSIDLKNGS 2578
Query: 155 IRTNK 159
I T K
Sbjct: 2579 IFTAK 2583
Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD---GLAVGRVHATDADEGQNAVVYYSV 140
S+ V++ + DIND +P F LP ++ Q G A A D D G N +V Y++
Sbjct: 1039 SSTQVSVNIIDINDNSPTF--LPESDNITILQSTLPGTAFYIARAEDRDSGLNGLVQYTI 1096
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQ 167
P F +D+ G + N L Q
Sbjct: 1097 TSQKPNIFTIDSRLGIVYLNGTLPENTQH 1125
>gi|449276788|gb|EMC85187.1| Cadherin EGF LAG seven-pass G-type receptor 3, partial [Columba
livia]
Length = 688
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 78/166 (46%), Gaps = 19/166 (11%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD--------------AASYFNLDPATEHQ 73
E G +++ V ATD D G ++ Y LL+++ D Y D
Sbjct: 380 EEGASVLSVSATDLDLGNNSVISYSLLNHSDDFRINNRTGEITLSSNLDYITADTVVTLI 439
Query: 74 GPIQDEG--GLSSTATVNIRVTDINDKNPEFQSL-PYEFSVPEGQDGLAVGRVHATDADE 130
D G L+S+ V +RV DIND P F +L E VPE + L +G ATD D
Sbjct: 440 VIAADHGVPQLTSSVRVTVRVNDINDNAPVFSTLIQTELLVPENEASLDLGVFSATDLDI 499
Query: 131 GQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERVF 174
G NA++ YS+ +D F + ++TG++ T K LD E Y ++
Sbjct: 500 GDNALISYSLQDDFAGIFHISSSTGELMTKKPLDREMVDSYELKII 545
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 79/161 (49%), Gaps = 21/161 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL------LDNNTDAASYFNLDPATEHQG------PIQ 77
G ++ +V ATD D+G G+V Y L +D +T + E QG
Sbjct: 67 GTSVARVSATDADAGFNGVVVYTLKGGEGRMDIDTSGLISLEKELDREKQGFYNLTVIAS 126
Query: 78 DEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNA 134
D+G S TA +N+ V D+ND P F S YE SVPE + G ++ V ATD D G NA
Sbjct: 127 DQGQPSLTAALNLTVIVDDVNDNPPVFSSNRYEMSVPEDEVLGKSLLTVSATDLDAGANA 186
Query: 135 VVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
+V Y + P F+VD TG + ++ LDYE + +
Sbjct: 187 LVKYRIVSQQPPTSSPVFLVDLTTGQLSLSQQLDYETTKQF 227
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 77/165 (46%), Gaps = 25/165 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF--------------NLDPATEHQG 74
LG +L+ V ATD D+G LV+YR++ +S LD T Q
Sbjct: 168 LGKSLLTVSATDLDAGANALVKYRIVSQQPPTSSPVFLVDLTTGQLSLSQQLDYETTKQF 227
Query: 75 PIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATD 127
++ E GG LS+T V I + D+ND PEF Y+ SV E Q G + TD
Sbjct: 228 EVEVEASDGGQPSLSATTLVVIPILDVNDNPPEFNQAAYDISVFENLQKGSPIYTFSVTD 287
Query: 128 ADEGQNA-VVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
DE +NA + YY E D P+ + + G I N +D E ++ Y
Sbjct: 288 KDEVENARITYYLSAEDGDNPYSIQQD-GTILANGFVDREAKETY 331
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVY 137
+G + ATV IRVTD+ND +P F S+ +V E G +V RV ATDAD G N VV
Sbjct: 28 DGNATDYATVFIRVTDVNDNSPVFGSISTTVTVLENAPAGTSVARVSATDADAGFNGVVV 87
Query: 138 YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ + +G I K LD EKQ Y
Sbjct: 88 YTLKGGEGRMDIDTSGLISLEKELDREKQGFY 119
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 26/174 (14%)
Query: 26 KHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT--------------- 70
++E + L ATD D G L+ Y L D D A F++ +T
Sbjct: 482 ENEASLDLGVFSATDLDIGDNALISYSLQD---DFAGIFHISSSTGELMTKKPLDREMVD 538
Query: 71 --EHQGPIQDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQDGLAVGRVHAT 126
E + D G S +A++ +R+T D+ND P F Y +V E + + AT
Sbjct: 539 SYELKIIAADSGRPSQSASLVLRITVEDVNDNPPVFPQKSYSVTVKENEPPHVILSAAAT 598
Query: 127 DADEGQNAVVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKF 179
D D G NA+++Y+ + E F V +G+I T + LDYE + Y F++ F
Sbjct: 599 DEDIGYNAIIHYTIIGETSLFHVGELSGNITTLQPLDYESRSQY---TFILKAF 649
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 88 VNIRVTDINDKNPEFQSLPYE--FSVPEGQDGLAVGRVHATDADEGQNAVVYYS-VPEDI 144
V+++V D+ND P+F Y V ++G +V V ATD D G N+V+ YS +
Sbjct: 351 VSVQVLDVNDNPPQFTRAHYSANVRVATAEEGASVLSVSATDLDLGNNSVISYSLLNHSD 410
Query: 145 PFVVDANTGDIRTNKALDY 163
F ++ TG+I + LDY
Sbjct: 411 DFRINNRTGEITLSSNLDY 429
>gi|157108477|ref|XP_001650243.1| cadherin [Aedes aegypti]
gi|108884003|gb|EAT48228.1| AAEL000700-PA [Aedes aegypti]
Length = 3131
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 77/172 (44%), Gaps = 35/172 (20%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP----------------- 75
+MQV A D D+G + YR+L ++ + + A+E P
Sbjct: 684 IMQVTAVDADTGNNARLTYRILGDDQRTRTGKSSSKASEANTPEIFGIFPNSGWIYLRTK 743
Query: 76 --------------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGL 118
+ D G L++T V + V D ND NP F YEF + E + G
Sbjct: 744 LDREDQERYNITVIVSDNGVPTLTATTHVIVSVLDANDNNPIFAKQLYEFQIEENMRRGS 803
Query: 119 AVGRVHATDADEGQNAVVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+G + ATDAD G NAVV YS +P + F ++ +G+I T LD E + +Y
Sbjct: 804 VIGLITATDADAGINAVVRYSLIPSNTSFQINPISGEITTRDRLDRETKSIY 855
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 80/171 (46%), Gaps = 39/171 (22%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G + + ATD D+G +V Y L+ +NT F ++P + G I
Sbjct: 802 GSVIGLITATDADAGINAVVRYSLIPSNTS----FQINPIS---GEITTRDRLDRETKSI 854
Query: 77 -------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYE--FSVPEGQD-GLAVGRVH 124
+D+G SS ++ I++ D+ND +PE P E SV E Q G V RV
Sbjct: 855 YDLVVEARDQGTPYRSSRVSIKIKILDVNDNSPEIVD-PQEDVVSVREEQPIGTEVVRVR 913
Query: 125 ATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
A D D G NA + YS+ + F +D TG IRT +LD+E++ +Y
Sbjct: 914 AIDRDYGVNASITYSILKGRDSDGHGMFTIDPITGLIRTKASLDHEEKTIY 964
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 26/158 (16%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------EHQGPIQDEGGLSSTA 86
V AT +SG G + Y + + D YF +DP + +H+ Q + +T+
Sbjct: 476 VSATSSNSGSRGSIRYFIYSGDPDG--YFAIDPVSGNIRVASTLDHETKPQVLLNIQATS 533
Query: 87 ---------TVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVV 136
VNI + D+ND PEF+S SVPE + G + +A D D G + V+
Sbjct: 534 GDPPAYGHTQVNIDIEDVNDNPPEFESSTVRISVPENVEIGSPLYAANAHDKDSGMSGVI 593
Query: 137 YYSVPEDIP-----FVVDANTGDIRTNKALDYEKQQLY 169
Y + + P F +D+ +G + + LDYE Q +
Sbjct: 594 TYRLSNNGPATGNLFSIDSRSGHLSLARPLDYETVQRH 631
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 73/168 (43%), Gaps = 28/168 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE----------------- 71
L ++ + ATD DSG FG + YR++ N A F +D T
Sbjct: 362 LSTPVVVIVATDSDSGSFGTISYRIVAGN--EAGIFRMDRLTGEIFVARPNMLSSRSQPY 419
Query: 72 HQGPI--QDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHAT 126
H+ I D GGL ST A V I V D + P F Y + V E + VG V AT
Sbjct: 420 HRLNISASDGGGLRSTHDAEVFISVIDATQRPPIFDKPRYTYYVKEDVKKNTVVGTVSAT 479
Query: 127 DADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYE-KQQLYL 170
++ G + Y + P F +D +G+IR LD+E K Q+ L
Sbjct: 480 SSNSGSRGSIRYFIYSGDPDGYFAIDPVSGNIRVASTLDHETKPQVLL 527
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 73/181 (40%), Gaps = 39/181 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG---PI-------- 76
E+G L A DKDSG G++ YRL +N + F++D + H P+
Sbjct: 572 EIGSPLYAANAHDKDSGMSGVITYRLSNNGPATGNLFSIDSRSGHLSLARPLDYETVQRH 631
Query: 77 ------QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
D G LS+ T+ + V D+ND P F+ Y V E + +V A D
Sbjct: 632 TLIVTASDSGIPSLSTNLTILVEVQDVNDNAPVFERSEYAIKVSESTPSNSQIMQVTAVD 691
Query: 128 ADEGQNAVVYYSVPED-----------------IP--FVVDANTGDIRTNKALDYEKQQL 168
AD G NA + Y + D P F + N+G I LD E Q+
Sbjct: 692 ADTGNNARLTYRILGDDQRTRTGKSSSKASEANTPEIFGIFPNSGWIYLRTKLDREDQER 751
Query: 169 Y 169
Y
Sbjct: 752 Y 752
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 9/94 (9%)
Query: 86 ATVNIRVTDINDKNPEFQSLP---YEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE 142
AT+ +R+TD+ND PEF LP Y +VPE + + V A+DADEG N + YS+
Sbjct: 1443 ATLVVRITDVNDHAPEF--LPGSCYPLAVPENSELSVIHTVVASDADEGLNGEITYSISG 1500
Query: 143 ---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
F +D NTG + T + LD E Y+ ++
Sbjct: 1501 GNIGNKFSIDMNTGAL-TARPLDREIHARYVLQI 1533
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 74/165 (44%), Gaps = 21/165 (12%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEH-- 72
+ EL V + V A+D D G G + Y + +D NT A + LD
Sbjct: 1471 ENSELSV-IHTVVASDADEGLNGEITYSISGGNIGNKFSIDMNTGALTARPLDREIHARY 1529
Query: 73 --QGPIQDEGGLSST---ATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHAT 126
Q QD G +S + +RV D ND +P+F+ Y ++ E G V V A
Sbjct: 1530 VLQITAQDRGSPTSHQGHCNITVRVEDENDNDPKFELQKYIATIDEDAPIGTTVLTVKAV 1589
Query: 127 DADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
DAD G NA + YS+ + F +D+ +G I T D E+Q +Y
Sbjct: 1590 DADIGINARIVYSLANVTEWLFDIDSKSGVITTAGHFDRERQSIY 1634
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 75/191 (39%), Gaps = 46/191 (24%)
Query: 5 PIPSALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT------ 58
P+P LE F G + +G+++ +ATD D G++G V Y + + T
Sbjct: 2445 PVPEYLE------FVG----ENEPIGISIFTARATDMDRGEYGRVNYSIDNAMTSGYSSV 2494
Query: 59 -DAASYFNLDPATEHQGPIQ--------------------DEGGLSSTATVNIRVTDIND 97
D F +D + G I D GG S T V I + ++
Sbjct: 2495 DDGWKLFKVDSVS---GVINSNAVFDYEEKNRYSFTLRATDTGGKSKTVKVRIMIESRDE 2551
Query: 98 KNPEFQSLPYEF--SVPEGQD---GLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDAN 151
+P+F Y F P+ G VG V ATD D G + + Y + P F ++
Sbjct: 2552 FSPQFTERTYRFILKTPDTGHLPVGYVVGHVTATDRDRGPDGRIVYQLTTQHPYFKMNRT 2611
Query: 152 TGDIRTNKALD 162
TG I K LD
Sbjct: 2612 TGAILVKKKLD 2622
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 29/175 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------------ 77
G TL+ + ATD D G G + Y L DN +A F ++P T Q
Sbjct: 1685 GQTLLHISATDVDQGSNGEIVYSLNDNPNNAK--FRINPNTGALSATQSLASENGRLLHI 1742
Query: 78 -----DEGGLSSTAT--VNIRVTDINDKNP--EFQSLPYEFSVPEGQD-GLAVGRVHATD 127
D+G AT + +RV D+ + P +FQ+ Y+ ++ E G V ++A
Sbjct: 1743 EVTARDKGNPPQVATGLIELRVGDLQQELPALKFQNNSYKVNLVENTPIGQTVLHLNAVR 1802
Query: 128 ADEGQNAVVYY--SVPEDIPFVVDANTGD--IRTNKALDYEK-QQLYLERVFLIS 177
+D + ++Y S ED F +DA TG+ IR + LDYE+ +L E + L++
Sbjct: 1803 SDGRRQKIIYSFGSGNEDGTFSIDAVTGEVKIRNSHNLDYERFSRLNTEGIDLVA 1857
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 21/171 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDA---ASYFNL 66
Y A + +G T++ VKA D D G + Y L +D+ + A +F+
Sbjct: 1569 YIATIDEDAPIGTTVLTVKAVDADIGINARIVYSLANVTEWLFDIDSKSGVITTAGHFDR 1628
Query: 67 DPATEHQ-GPIQDEGGL----SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAV 120
+ + + + +GG S + V + + D+ND P F P++ + Q G +
Sbjct: 1629 ERQSIYNFMVVATDGGRYNARSQSVQVQVIIADVNDNKPVFDKYPFKEQIGALVQPGQTL 1688
Query: 121 GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQL 168
+ ATD D+G N + YS+ P + F ++ NTG + ++L E +L
Sbjct: 1689 LHISATDVDQGSNGEIVYSLNDNPNNAKFRINPNTGALSATQSLASENGRL 1739
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 68/169 (40%), Gaps = 47/169 (27%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------------------- 68
+G + ATD DSG ++Y + T +F++D
Sbjct: 1130 VGSVVFNFTATDNDSGTNAEIKYNISKPATAQKEFFSIDSLTGSLTLLAPLDYEETKEFL 1189
Query: 69 ----ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA----- 119
AT+ + + ++++AT I VTD+ND +P +F VP+ QD
Sbjct: 1190 LIVQATDQSSNVTER--MTTSATARIMVTDVNDNSP-------KFVVPQAQDTTVYVSDS 1240
Query: 120 ------VGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNK 159
V V A D D G+N V Y + ED F +D +TG ++ K
Sbjct: 1241 MEVNHIVSHVVAIDRDSGENGRVVYKIVSGNEDERFAIDPDTGFVKLAK 1289
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 64/144 (44%), Gaps = 24/144 (16%)
Query: 36 VKATDKDSGKFGLVEYRL-----------LDNNTD---AASYFNLDPATEHQGPI--QDE 79
V ATD D G +V Y L + ++T A+ + + ++ PI D
Sbjct: 261 VSATDPDCGVNAMVNYTLGEGYKKITEFEIRSSTGEVCIAAELDYETRNSYEFPIIATDR 320
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-----GLAVGRVHATDADEGQNA 134
GGLS+TA V I++TD+ND P F Y S+ E V + ATD+D G
Sbjct: 321 GGLSTTAMVKIQLTDVNDNRPTFYPREYNVSLRESMPTNSLLSTPVVVIVATDSDSGSFG 380
Query: 135 VVYYSV---PEDIPFVVDANTGDI 155
+ Y + E F +D TG+I
Sbjct: 381 TISYRIVAGNEAGIFRMDRLTGEI 404
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDAD--EGQNAVVYY 138
+SS V I V D ND PEFQ PYE ++ E ++G++ A DAD N+ V Y
Sbjct: 2316 MSSAIRVTITVEDANDNAPEFQPGPYEVAISETAPIKYSIGQISAVDADLLNSPNSEVVY 2375
Query: 139 SV---PEDIPFVVDANTGDIRTNKALDYEK 165
+ + F +D TG + N LDY++
Sbjct: 2376 QIVSGNDGGWFSIDLITGLLYINNNLDYDR 2405
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVP 141
SS TV I + D+ND P++ S P + E G V ATD D G NA + Y++
Sbjct: 1096 SSAVTVKIEIADVNDNPPKWPSDPMNVYISEDAAVGSVVFNFTATDNDSGTNAEIKYNIS 1155
Query: 142 EDIP-----FVVDANTGDIRTNKALDYEKQQLYL 170
+ F +D+ TG + LDYE+ + +L
Sbjct: 1156 KPATAQKEFFSIDSLTGSLTLLAPLDYEETKEFL 1189
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE-- 142
++ + + D ND P F Y SV EG + G V +V+A D D+G NA + Y + +
Sbjct: 1871 CSIKVVLQDENDNAPRFTQQQYSASVWEGNNKGEFVIKVNAFDTDQGSNAHILYHIVDGN 1930
Query: 143 -DIPFVVD-ANTGDIRTNKALDYEKQQLYLERVF 174
D F+++ A +G ++TN LD E + Y +V
Sbjct: 1931 HDNAFIIEPAFSGIVKTNIVLDREIRDKYKLKVI 1964
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 79/188 (42%), Gaps = 49/188 (26%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDN-NTDAASYFN-------------LDPATEHQG 74
+G L + A D D+ + Y D+ + DA SYF+ LD H+
Sbjct: 2007 VGTVLTSITANDVDTNP--PLTYSFGDSPDEDAKSYFSIDRYSGKVILIKPLDYEARHEF 2064
Query: 75 PIQ----DEGGLSSTATVNIRVTDINDKNPEFQSLPY----------EFSVP-------- 112
++ D ++ T + +RVTD+ND P+FQ + Y F P
Sbjct: 2065 QLRILASDSAHVARTL-LTVRVTDVNDNPPQFQQITYHAMLNGTNFPRFKNPGTHSNISF 2123
Query: 113 -------EGQDGLAVGRVHATDADEGQNAVVYYS-VPEDIPFVVDANTGDIRTNKALDYE 164
+ +A+ V+ATD+D NA + Y+ +P I F +DA TG + N + +
Sbjct: 2124 SLITDDTDSNSNIAIIAVNATDSDSENNAAIRYTIIPPSIGFAIDALTGQLFVNMSQVHR 2183
Query: 165 KQQ--LYL 170
+ LYL
Sbjct: 2184 TRSGTLYL 2191
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 74/184 (40%), Gaps = 35/184 (19%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------------- 68
D E+ + V A D+DSG+ G V Y+++ N D F +DP
Sbjct: 1239 DSMEVNHIVSHVVAIDRDSGENGRVVYKIVSGNED--ERFAIDPDTGFVKLAKPFSSNFI 1296
Query: 69 ATEHQGPIQDEGGLSSTAT-----------VNIRVTDINDKN--PEFQSLPYEFSVPEG- 114
A + I L TAT + I+V N N P F Y ++ E
Sbjct: 1297 ADNSKNSITGRYNLVITATDQGTPRSKEAKITIQVVIQNTSNNPPRFLESVYHINITENV 1356
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLE 171
G V RV A ++ NA + Y +P+ D FVVD+ G + T D E + +Y
Sbjct: 1357 PTGSFVVRVSAKSYNDNGNANLTYEIPKGVGDDHFVVDSVRGIVTTRGTFDRESKDMYTV 1416
Query: 172 RVFL 175
+++
Sbjct: 1417 PIYV 1420
Score = 42.0 bits (97), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 74/183 (40%), Gaps = 40/183 (21%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPATEHQGPIQDEGGL 82
R++ +G +++V+A D+D G + Y +L ++D F +DP T G I+ + L
Sbjct: 900 REEQPIGTEVVRVRAIDRDYGVNASITYSILKGRDSDGHGMFTIDPIT---GLIRTKASL 956
Query: 83 ----------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
+ + I V D+ND P F S F + E G
Sbjct: 957 DHEEKTIYRLAVAATDNGKPPRQTVRLLRIEVLDLNDNRPTFTSSSLVFRLREDVGVGHV 1016
Query: 120 VGRVHATDADEGQNA--------VVYYSVP--EDI---PFVVDANTGDIRTNKALDYEKQ 166
+G + + + +N + Y P DI F +D N+G + ++LD E+Q
Sbjct: 1017 IGSISGNEQSDLENLITSSNDLHITYTLTPLTNDIAEGAFDIDRNSGKLVVARSLDREQQ 1076
Query: 167 QLY 169
Y
Sbjct: 1077 SEY 1079
Score = 38.9 bits (89), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 13/93 (13%)
Query: 90 IRVTDINDKNPEFQSLPY-EFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--- 145
I +TD ND P+F Y EF G+++ ATD D G+ V YS+ +
Sbjct: 2432 INLTDENDNEPQFPVPEYLEFVGENEPIGISIFTARATDMDRGEYGRVNYSIDNAMTSGY 2491
Query: 146 ---------FVVDANTGDIRTNKALDYEKQQLY 169
F VD+ +G I +N DYE++ Y
Sbjct: 2492 SSVDDGWKLFKVDSVSGVINSNAVFDYEEKNRY 2524
>gi|348582123|ref|XP_003476826.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4-like [Cavia
porcellus]
Length = 4819
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F +DP + E +
Sbjct: 1756 GSKIMQLTAMDADEGANALVTYTIISGADDS---FRIDPESGDLIATKRLDRERRSKYSL 1812
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G SS +NI V+D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1813 LVRADDGLQSSDMRINITVSDVNDHTPKFSRPVYSFDIPEDTTPGSLVAAILATDDDSGV 1872
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG + LDYE QQ Y+ V
Sbjct: 1873 NGEITYIVNEDDEDGIFFLNPITGVFNLTRILDYETQQYYILTV 1916
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 81/170 (47%), Gaps = 22/170 (12%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GLV Y + N + A + +
Sbjct: 3098 ATIPESHSIGTIVRTVSARDRDAAMNGLVRYSISAGNEEGIFAINSSTGVLVLAKALDYE 3157
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
+H+ I+ D G ++ T +V I V D+ND +P F Y +V E G V
Sbjct: 3158 LCQKHEITIRATDGGWVARTGYCSVTINVIDVNDNSPVFVPDEYFPTVLENAPSGTTVIH 3217
Query: 123 VHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATD D G NAV+ YS+ D+ FV+D NTG I T LD+E +Q Y
Sbjct: 3218 LNATDVDSGTNAVIAYSIQSSDSDL-FVIDPNTGIITTQGFLDFETKQSY 3266
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 79/162 (48%), Gaps = 24/162 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V A DKDSG G ++Y +++ N + + F+++ AT I+
Sbjct: 2689 ILTVSAVDKDSGPNGQLDYEIVNGNKENS--FSINHATGEIRSIRPLDREKVSHYMLTIK 2746
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G S + +V I + D ND P F + + VPE G V RV +D D G
Sbjct: 2747 SSDKGSPSQSTSVKVIINILDENDNAPRFSQI-FSAHVPENSPLGYIVTRVTTSDEDIGA 2805
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NAV YS+ + +PF ++ NTGDI ++ L+ E Y RV
Sbjct: 2806 NAVSRYSLMDTSLPFTINPNTGDIIISRPLNREDTDRYRIRV 2847
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 75/156 (48%), Gaps = 18/156 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI----Q 77
T++QV A D D G + Y LL N D A + LD T+ +
Sbjct: 2278 TILQVIARDDDQGSNSKLSYVLLGGNEDQAFTLSASGELRVTQSLDRETKEHFVLVITAT 2337
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNA 134
D G L+ T T+N+ V D+ND P F S Y ++PE G V V+A+DAD NA
Sbjct: 2338 DSGSPALTGTGTINVIVDDVNDNVPTFGSKMYFTTIPEDAPTGTDVLLVNASDADASTNA 2397
Query: 135 VVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V+ YS + + F ++ +TG I T+ LD E + Y
Sbjct: 2398 VISYSIIGGNSQFTINPSTGQIITSALLDRETKDNY 2433
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 76/175 (43%), Gaps = 25/175 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
FY A + +++V A+D D GK GL+ Y ++ N + F +D + I
Sbjct: 1214 FYQATISETAANLTQVLRVSASDVDEGKNGLIHYSVIKGNEERQ--FAIDSTSGQVTLIG 1271
Query: 78 -----------------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
D G L+ST T+NI + D ND P F V E + G
Sbjct: 1272 KLDYEATPTYSLVIQAVDSGTISLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIG 1331
Query: 118 LAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD+D G NA ++YS+ F + NTG I K LD+E Q LY
Sbjct: 1332 ELVSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSIFLAKKLDFETQSLY 1386
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 22/168 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG + +V +D+D G + Y L+D + F ++P T
Sbjct: 2776 SQIFSAHVPENSPLGYIVTRVTTSDEDIGANAVSRYSLMDTSLP----FTINPNTGDIII 2831
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V I VTDIND P F Y PE + G
Sbjct: 2832 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNAPRFSRPSYYLDCPELAEIGS 2891
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
V +V+ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 2892 KVTQVYATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQVLKYQN 2939
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 38 ATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGGLSSTAT--- 87
ATD D G G+ YR++ N A F LD G + +GGL T
Sbjct: 159 ATDSDIGSNGVDHRSYRIIRGN--EAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPNY 216
Query: 88 -------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
VN+ V DIND P F S Y+ VPE G +V +V A D
Sbjct: 217 QLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQXGVPEDAVVGSSVLQVAAAD 276
Query: 128 ADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ADEG NA + Y + E PF +D TG I + LD+E ++ Y
Sbjct: 277 ADEGTNADIRYRLQDEGTPFHMDPETGLITVREPLDFEARRQY 319
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 82/188 (43%), Gaps = 23/188 (12%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF---NLDPAT 70
D L Y + + +V+A+DKDSG G + Y + + NT DA F L +
Sbjct: 997 DQLSYEVTLSESEPVNSRFFKVQASDKDSGANGEIAYTISEGNTGDAFGIFPDGQLYIKS 1056
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E +QD LS+T V + + D+ND P F S Y F E Q G
Sbjct: 1057 ELDRELQDRYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAG 1116
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLER---V 173
VG+V+A D D G N V YS P F + A TG+I + D ++ L R V
Sbjct: 1117 SFVGKVNAIDKDFGPNGEVRYSFEMVQPDFELHAITGEITSTHQFD--RESLMRRRGTAV 1174
Query: 174 FLISKFAT 181
F + AT
Sbjct: 1175 FTFTVIAT 1182
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 81/168 (48%), Gaps = 33/168 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------------ 77
G ++QV A D D G G V Y ++D NT+ F +D T G I
Sbjct: 2170 GTDILQVFAADGDEGTNGQVRYGIVDGNTNQE--FRIDSVT---GAITVAKPLDREKIAT 2224
Query: 78 --------DEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHA 125
D G + T+TV+I + DIND P F+ PY +VPE + L + +V A
Sbjct: 2225 YLLTVQAADRGSTPRTDTSTVSIVLLDINDFVPIFELSPYSVNVPENLETLPRTILQVIA 2284
Query: 126 TDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D D+G N+ + Y + ED F + A +G++R ++LD E ++ ++
Sbjct: 2285 RDDDQGSNSKLSYVLLGGNEDQAFTLSA-SGELRVTQSLDRETKEHFV 2331
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +A+D DSG +EY LL+ + S +D G + D
Sbjct: 2069 VFKAQASDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATD 2128
Query: 79 EGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y+ + E G + +V A D DEG N
Sbjct: 2129 KGQPPLSSSTEVVVMVLDINDNNPVFAQALYKVEINEDTLTGTDILQVFAADGDEGTNGQ 2188
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V Y + + + F +D+ TG I K LD EK YL V
Sbjct: 2189 VRYGIVDGNTNQEFRIDSVTGAITVAKPLDREKIATYLLTV 2229
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L ATV++ + DIND P+F Y+ ++ E L V RV A+D DEG+N +++YSV
Sbjct: 1190 LKDQATVHVYMKDINDNAPKFLKDFYQATISETAANLTQVLRVSASDVDEGKNGLIHYSV 1249
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E+ F +D+ +G + LDYE Y
Sbjct: 1250 IKGNEERQFAIDSTSGQVTLIGKLDYEATPTY 1281
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 73/164 (44%), Gaps = 32/164 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3212 GTTVIHLNATDVDSGTNAVIAYSIQSSDSD---LFVIDPNT---GIITTQGFLDFETKQS 3265
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S ATVNI++ N+ P F S Y F + E G VG V A+
Sbjct: 3266 YHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFAS 3325
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQ 167
D D G + V+Y + F ++ TG I + LD EK++
Sbjct: 3326 DRDMGTDGEVHYLIFGNSRKKGFQINKRTGQIYVSGLLDREKEE 3369
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 75/173 (43%), Gaps = 23/173 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-- 76
Y + G L+ + ATD D G G V + L + +D F LDP + I
Sbjct: 588 YNVSVVENSPAGTELLVLGATDGDLGDNGTVRFSLQETESDQ-RLFRLDPVSGRLSTISS 646
Query: 77 --QDEGGL---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
++E SS +N+ + D+ND +P F + Y + E + G +
Sbjct: 647 LDREEQAFYSLLVLATDLGSPPQSSVTHINVSLLDMNDNSPVFYPVQYFAHIQENEPGGS 706
Query: 120 -VGRVHATDADEGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ V ATD D G N V YS+ + F ++A +G I T ALD E++ Y
Sbjct: 707 YITTVSATDPDLGLNGTVRYSISAGDRSRFQINAQSGVISTRIALDREEKTAY 759
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 74/164 (45%), Gaps = 26/164 (15%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG------------ 74
++G L++V A D KD G V+Y + +N + F LD T
Sbjct: 2999 KVGTKLIKVTAVDDKDFGLNSEVQYFI--SNENYLGKFKLDSDTGWISVASSLISDLNQN 3056
Query: 75 -----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
+D+G LSS ATV I VT+ N PEF ++PE G V V A
Sbjct: 3057 FLITVTAKDKGNPPLSSQATVQITVTEENYHTPEFSQSHMSATIPESHSIGTIVRTVSAR 3116
Query: 127 DADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQ 167
D D N +V YS+ E+ F ++++TG + KALDYE Q
Sbjct: 3117 DRDAAMNGLVRYSISAGNEEGIFAINSSTGVLVLAKALDYELCQ 3160
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 69/171 (40%), Gaps = 32/171 (18%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPATEHQGPIQ 77
+ + G ++ Q KA D D G G+V Y L N N + L P H G Q
Sbjct: 904 ENWQAGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFSINEKNGNISLLGPLDVHAGSYQ 963
Query: 78 DE--------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
E LSS+ + + V D+ND P F L YE ++ E + +V A+D
Sbjct: 964 IEILASDMGVPQLSSSVILTVYVYDVNDNPPVFDQLSYEVTLSESEPVNSRFFKVQASDK 1023
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYL 170
D G N + Y++ E NTGD + LD E Q Y+
Sbjct: 1024 DSGANGEIAYTISE-------GNTGDAFGIFPDGQLYIKSELDRELQDRYV 1067
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1724 AEVEITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTYTIISGA 1783
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ K LD E++ Y
Sbjct: 1784 DDSFRIDPESGDLIATKRLDRERRSKY 1810
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV- 140
SS ++I V D+ND +P F+ P+ + E + V A D D G N + Y +
Sbjct: 2651 FSSYEKLDITVLDVNDNSPIFKEDPFVSEILENLSPRKILTVSAVDKDSGPNGQLDYEIV 2710
Query: 141 --PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
++ F ++ TG+IR+ + LD EK Y+
Sbjct: 2711 NGNKENSFSINHATGEIRSIRPLDREKVSHYM 2742
Score = 42.7 bits (99), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 9/157 (5%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDE 79
G+++ +L + + T G F + + + AS + + + +Q +
Sbjct: 813 GSVSASSMDLNSNISYLITTGDQKGMFAINQ---VTGQLTTASVIDREEQSFYQLKVVAS 869
Query: 80 GG-LSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVY 137
GG ++ VNI V D+ND +P F Q++ V Q G ++ + A D DEG N +V
Sbjct: 870 GGTVTGDTVVNITVKDLNDNSPHFLQAVESVNVVENWQAGHSIFQAKAVDPDEGVNGMVL 929
Query: 138 YSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
YS+ P+++ F ++ G+I LD +E
Sbjct: 930 YSLKQNPKNL-FSINEKNGNISLLGPLDVHAGSYQIE 965
Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 70/167 (41%), Gaps = 41/167 (24%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD--EGGLS---------- 83
V ATD DSG + Y ++ N +F + +EH G + GGL
Sbjct: 497 VSATDGDSGLNANLRYSIISGN--KLGWFCI---SEHSGLVTTGATGGLDRELASEIVLN 551
Query: 84 ------------STATVNIRVTDINDKNPEF-QSLPYEFSV----PEGQDGLAVGRVHAT 126
S A + + + D+ND+ P F Q Y SV P G + L +G AT
Sbjct: 552 ISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYNVSVVENSPAGTELLVLG---AT 608
Query: 127 DADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D D G N V +S+ E F +D +G + T +LD E+Q Y
Sbjct: 609 DGDLGDNGTVRFSLQETESDQRLFRLDPVSGRLSTISSLDREEQAFY 655
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE-DI-P 145
V I VTD+ND P F S + P G + + A D DEG N V Y + DI
Sbjct: 1515 VTILVTDLNDNVPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEVEYEIINGDIDT 1574
Query: 146 FVVDANTGDIRTNKAL 161
F+VD +GD+R AL
Sbjct: 1575 FIVDRYSGDLRVASAL 1590
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 70/173 (40%), Gaps = 25/173 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNN----------TDAASYFNLDP 68
LG T++ TD D G + Y + +D N ++ S++NL
Sbjct: 1959 LGSTVLVFNVTDADDGINSQLAYSIASGDSLAQFAIDKNGILKVMKALDRESQSFYNL-V 2017
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
H P +STA V+I + D+ND P F S P +PE V + A+D
Sbjct: 2018 VQVHDLPQLPASRFTSTAQVSIILLDVNDNPPTFLS-PKLTYIPENTPIDTVVFKAQASD 2076
Query: 128 ADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
D G N+ + Y++ P F + G++R LD E+ Y V K
Sbjct: 2077 PDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATDK 2129
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG + Y + N F++ P T E Q
Sbjct: 1329 RIGELVSSVTATDSDSGDNADLHYSITGTNNHGT--FSISPNTGSIFLAKKLDFETQSLY 1386
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G SST +V I V D ND P F S+ E G +V V A D
Sbjct: 1387 KLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVTAHD 1446
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + Y++ + +P F +D G I TN +D E L+
Sbjct: 1447 PDADINGQLSYAIVQQMPRGNHFSIDEVKGTIYTNAEIDREFANLF 1492
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV 140
SS A++ I V DIND P F Y ++ E G V V ATD D G NA + YS+
Sbjct: 456 SSVASLVIFVNDINDHPPVFAQQVYRVNLSEEAPPGSYVSGVSATDGDSGLNANLRYSI 514
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 66/174 (37%), Gaps = 20/174 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G V Y + + ++ LD
Sbjct: 694 YFAHIQENEPGGSYITTVSATDPDLGLNGTVRYSISAGDRSRFQINAQSGVISTRIALDR 753
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V + V D D P F Y F V E G VG
Sbjct: 754 EEKTAYQLQIVATDGGNLQSPNQAIVTVTVLDTQDNPPVFSQAAYSFVVFENVALGYHVG 813
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A+ D N + Y D F ++ TG + T +D E+Q Y +V
Sbjct: 814 SVSASSMDLNSN-ISYLITTGDQKGMFAINQVTGQLTTASVIDREEQSFYQLKV 866
>gi|443710969|gb|ELU04951.1| hypothetical protein CAPTEDRAFT_82390, partial [Capitella teleta]
Length = 688
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE--GQDGLAVGRVHATDADEGQNAVVYYSV 140
S T + + V D+ND P FQ YEFSV E D L +G V A D D G+NAVV YS+
Sbjct: 219 SGTTAIKVTVQDVNDNVPVFQRSAYEFSVEEQVSVDSL-IGTVKADDLDIGENAVVVYSI 277
Query: 141 PED-IPFVVDANTGDIRTNKALDYEKQQLYL 170
P +PF +D+ +G+I N LD+E+ Y+
Sbjct: 278 PSSTVPFRIDSASGEIFNNIVLDHEEHTSYV 308
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 62/125 (49%), Gaps = 10/125 (8%)
Query: 59 DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDG 117
+A +++L E G E L + T+ + +TDIND P+F L Y S+ E G
Sbjct: 411 EAIPFYDLKITCEDDG----EPKLYAQKTLPVAITDINDNAPQFSQLVYLASITENAAHG 466
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
+V ATD D G N V YS+ + F +D +G IR+ +LD E+ Y ++
Sbjct: 467 TSVFTASATDPDAGSNGQVVYSIDDPTNFTIDPQSGFIRSKISLDREEVNRY-----ALT 521
Query: 178 KFATS 182
+ATS
Sbjct: 522 AYATS 526
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 81/188 (43%), Gaps = 42/188 (22%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI 76
L Y A + G ++ ATD D+G G V Y + D + F +DP G I
Sbjct: 453 LVYLASITENAAHGTSVFTASATDPDAGSNGQVVYSI-----DDPTNFTIDP---QSGFI 504
Query: 77 QDEGGLS----------------------STATVNIRVTDINDKNP------EFQSLPYE 108
+ + L TA ++I + D ND+ P E+ + +
Sbjct: 505 RSKISLDREEVNRYALTAYATSIGRHPTYGTAQIHIYIADKNDQPPVLYFPSEYNNAVHI 564
Query: 109 FSVPEGQDGLAVGRVHATDADEGQNAVV-YYSVPED-IPFVVDANTGDIRTNKALD-YEK 165
S+P Q V R++ATD D G NA++ YY ED F VD ++G I T LD YE+
Sbjct: 565 ASLPADQ---LVARINATDHDVGTNALLSYYISGEDAFMFRVDESSGAISTRVDLDKYEQ 621
Query: 166 QQLYLERV 173
Q ++ V
Sbjct: 622 QAFFVTVV 629
>gi|321479216|gb|EFX90172.1| hypothetical protein DAPPUDRAFT_6 [Daphnia pulex]
Length = 3261
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 82/170 (48%), Gaps = 25/170 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI----QDEGG 81
+G L+ V A D+D+ G V Y ++ N D A F+LD A+ P+ Q+
Sbjct: 1493 VGYPLLHVIAVDRDARDNGRVSYSIVSGNEDGA--FSLDVASGVLAVTRPLDRESQNRYA 1550
Query: 82 LSSTAT------------VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
L+ TAT V+I V DIND P F YE +V E G V +V ATD
Sbjct: 1551 LNVTATDHGRPARASWQLVHIHVEDINDNPPRFVRPLYEAAVAENSPAGTFVVKVSATDK 1610
Query: 129 DEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D G N + Y++PE I F VD TG + T LD E++ Y+ +++
Sbjct: 1611 DVGTNGNLTYAIPEGIADGMFSVDPTTGAVTTTGPLDRERKSSYIVTIYV 1660
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 24/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------EH----QGPI--- 76
G ++ Q+ A D+D G +V Y +L++ + +F +D T +H P+
Sbjct: 443 GTSVFQLSALDRDLGNNSVVTYSILESPDTHSDWFQIDGRTGLITTRKHIDCETDPVPQI 502
Query: 77 ----QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
D G L+ TATV + + D+ND P F Y SV E + G V +V ATD D
Sbjct: 503 TILASDAGRPSLTGTATVRVTIRDVNDNEPIFDQSFYNVSVREDEAVGHCVLKVSATDPD 562
Query: 130 EGQNAVVYYSVPEDI----PFVVDANTGDIRTNKALDYEKQQLY 169
G NA+V Y++ + F V+ ++G+I + ALD+EK+ +Y
Sbjct: 563 CGVNAIVNYTMGDGFGKYREFEVNPSSGEICISAALDHEKRNIY 606
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 81/184 (44%), Gaps = 38/184 (20%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG 74
D++ + ELG + A D DSG G V Y+LL T+ F +DP QG
Sbjct: 845 DTVVVKISVAENAELGSPIYAAHAHDDDSGDNGAVIYQLL---TNPDGLFKIDP---RQG 898
Query: 75 PI--------------------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
I QD+G L S T+NI V D+ND P F+ Y+ +V
Sbjct: 899 FIMLTRKLDFETTQKYALVIGAQDKGSPPLRSNLTLNIEVQDVNDNPPTFEKNEYQVNVA 958
Query: 113 EGQDGLAVG----RVHATDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEK 165
E LAV +V+A D D G NA + Y V E+ F + N+G + K+LD E
Sbjct: 959 E---SLAVNSQFLQVNAIDLDTGNNARLTYRVKEEALADVFGIFPNSGSLYLKKSLDREM 1015
Query: 166 QQLY 169
+ Y
Sbjct: 1016 RDRY 1019
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 68/152 (44%), Gaps = 21/152 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQG 74
G + A D D G +G ++Y + + +FN+DP T +
Sbjct: 2655 GTVVFTAHANDMDRGPYGKLKYSIAGG--EGKDHFNIDPTTGTIVTQSVFDYEAKNRYYL 2712
Query: 75 PIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
IQ D GG +++ V I V ++ PEF Y FSVP D G A+G+V ATD D+G
Sbjct: 2713 SIQASDVGGQTASVNVQIDVESRDEFAPEFTESSYRFSVPSDADVGYAIGKVLATDRDKG 2772
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALD 162
+ V Y + P F ++ G I K LD
Sbjct: 2773 TDGRVVYHLRNQHPHFKINKMNGVISVRKRLD 2804
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 72/177 (40%), Gaps = 28/177 (15%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y + +G L++V ATD+D + + Y + N F +DP+T
Sbjct: 2537 LYEVKVSEAQAIGTALLRVAATDRDHDENARLSYDITSGNDKGC--FEVDPSTGVISLKK 2594
Query: 71 --------EHQGPIQDEGG-----LSSTATVNIRVTDINDKNPEFQSLPY-EFSVPEGQD 116
EH+ ++ G LS+ AT+ ++V D ND P F Y EF
Sbjct: 2595 PLDFEMSGEHRFIVRASDGHSTQPLSAIATIAVKVEDENDNGPAFPVGSYLEFVAENAPA 2654
Query: 117 GLAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G V HA D D G + YS+ +D F +D TG I T DYE + Y
Sbjct: 2655 GTVVFTAHANDMDRGPYGKLKYSIAGGEGKD-HFNIDPTTGTIVTQSVFDYEAKNRY 2710
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 74/168 (44%), Gaps = 29/168 (17%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLL------DNNTDAASYFNLDP-------ATEHQG 74
E G + V ATDKD + Y LL N+ F P E Q
Sbjct: 1067 EKGALVGVVSATDKDLDANAALRYSLLPVNGSFQLNSLTGEIFTKGPLDREAKAVHELQI 1126
Query: 75 PIQDEGG--LSSTATVNIRVTDINDKNP-----EFQSLPYEFSVPEGQDGLAVGRVHATD 127
++D+G S+ A V + VTD+ND P E L +P G + V R+ A D
Sbjct: 1127 EVKDQGNPPRSAKAIVRVMVTDVNDNTPVIVEPEETVLSVREELPAGTE---VVRIRAVD 1183
Query: 128 ADEGQNAVVYYS--VPEDI----PFVVDANTGDIRTNKALDYEKQQLY 169
DEG NA + YS + +D F +D +TG IRT LD+E++ Y
Sbjct: 1184 TDEGNNASITYSFVIGDDTDGLEAFTIDESTGTIRTKVTLDHEERAFY 1231
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 76/162 (46%), Gaps = 22/162 (13%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------ 68
D FY R+ +G +++V ATD D G +V Y + D F ++P
Sbjct: 535 DQSFYNVSVREDEAVGHCVLKVSATDPDCGVNAIVNYTMGDG-FGKYREFEVNPSSGEIC 593
Query: 69 ---ATEHQG------PI--QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD- 116
A +H+ PI D GGLS+TA V I+V D+ND P F Y S+ E +
Sbjct: 594 ISAALDHEKRNIYEFPILATDRGGLSTTAMVKIQVVDVNDNRPTFYPREYNVSLRERETV 653
Query: 117 GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
V V ATD D G+ V Y++ E+ F V+ ++G++
Sbjct: 654 NSPVVVVVATDKDAGKYGTVRYAIVAGNEEGLFRVEMSSGEV 695
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV----- 140
TVNI + D+ND P F Y SV E G +V +V ATD D G N + YS+
Sbjct: 195 TVNITIQDVNDNQPIFNQSRYFASVAENATIGTSVLQVFATDTDAGDNGRITYSINRRQS 254
Query: 141 PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D FV+D TG I N+ LD+E ++++
Sbjct: 255 DRDSVFVIDPLTGVISVNRPLDFETKEVH 283
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 85/194 (43%), Gaps = 38/194 (19%)
Query: 8 SALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD 67
+A T DS Y + + + G +MQV ATD D G + Y ++D N D A F ++
Sbjct: 2112 NAPRFTQDS--YTSAVWEGNNKGTFVMQVSATDGDMGANANIIYHIVDGNHDNA--FVIE 2167
Query: 68 PATEHQGPIQ--------------------DEGG--LSSTATVNIRVTDINDKNPEFQSL 105
P G ++ DEG L+ T T+ I + D+ND P F
Sbjct: 2168 PP--FSGIVKTNIVLDREIRDFYRLTIIATDEGSPQLTGTCTLRINIVDVNDNQPTFP-- 2223
Query: 106 PYE-FSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNK 159
P+ SV EG + G + + A D D N + Y + D F +D +G I +
Sbjct: 2224 PHSVVSVSEGSEVGTVITTITANDVD--TNPTLTYDFADGGNPDRMFSIDRFSGKITLAQ 2281
Query: 160 ALDYEKQQLYLERV 173
LD+E+QQ Y RV
Sbjct: 2282 PLDHERQQQYTLRV 2295
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 78/175 (44%), Gaps = 22/175 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD--------AASYFNLDPAT 70
Y R++ + ++ V ATDKD+GK+G V Y ++ N + + F P T
Sbjct: 643 YNVSLRERETVNSPVVVVVATDKDAGKYGTVRYAIVAGNEEGLFRVEMSSGEVFLTQPLT 702
Query: 71 E----HQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
H+ I D GGL S A V + V D N + P F++ Y FSV E Q +G
Sbjct: 703 RARLAHRLNISATDGGGLRSAHDAEVLVTVIDSNHQPPIFENNRYLFSVREDAQRNSVIG 762
Query: 122 RVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A+ A YS+ P F ++ TG IRTN LD+E L V
Sbjct: 763 TVSASSVTGSDTA--RYSIYSGDPNGYFSINPVTGVIRTNTELDHETHPFVLLNV 815
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYS-V 140
S+ ATVN+ V D ND +P F Y+F++ E + G VG V ATD D NA + YS +
Sbjct: 1034 SAAATVNVFVNDANDNDPVFTRDVYQFTIEENLEKGALVGVVSATDKDLDANAALRYSLL 1093
Query: 141 PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
P + F +++ TG+I T LD E + ++
Sbjct: 1094 PVNGSFQLNSLTGEIFTKGPLDREAKAVH 1122
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 5/91 (5%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV---PE 142
++ + V D ND P F Y S+PE + G AV ++ATDAD+G+NA V YS+ P
Sbjct: 2307 SITVNVLDENDNAPVFSVQNYRASLPELTEPGYAVLSINATDADKGENARVRYSLAISPT 2366
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
D F + TG I TN+ L + +Q L+ V
Sbjct: 2367 D-AFYISEETGVIYTNQTLTFNPRQPVLQLV 2396
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
+STA V I V D+ND P F YE V E Q G A+ RV ATD D +NA + Y +
Sbjct: 2514 NSTADVVIHVDDVNDNPPVFNQTLYEVKVSEAQAIGTALLRVAATDRDHDENARLSYDIT 2573
Query: 142 ---EDIPFVVDANTGDIRTNKALDYE 164
+ F VD +TG I K LD+E
Sbjct: 2574 SGNDKGCFEVDPSTGVISLKKPLDFE 2599
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L ++ N+RVTD ND P+F+ Y +V E D G +V ++ A D D G N+VV YS+
Sbjct: 407 LHASRAFNLRVTDTNDNAPQFEQTMYYANVLEVADPGTSVFQLSALDRDLGNNSVVTYSI 466
Query: 141 PEDIP-----FVVDANTGDIRTNKALDYE 164
E F +D TG I T K +D E
Sbjct: 467 LESPDTHSDWFQIDGRTGLITTRKHIDCE 495
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 78/176 (44%), Gaps = 26/176 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQG 74
Y A + G +++V ATDKD G G + Y + + D F++DP T G
Sbjct: 1587 LYEAAVAENSPAGTFVVKVSATDKDVGTNGNLTYAIPEGIADG--MFSVDPTTGAVTTTG 1644
Query: 75 PIQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL 118
P+ E S T+ +R V D+ND P+F Y VPE D
Sbjct: 1645 PLDRERKSSYIVTIYVRDGSFPAQYDATSVVVNVLDVNDHAPQFGESCYPLRVPENSDLS 1704
Query: 119 AVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYE-KQQLYL 170
+ V ATDAD G N + YS+ F +D +TG + +++ LD E K + YL
Sbjct: 1705 VIHTVVATDADSGVNGEITYSITGGNVGNKFSIDLHTGQL-SSRPLDRELKDRYYL 1759
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
S+ + I V D+ND P F + P FSV E G AV A D D+G N + Y++
Sbjct: 1352 SNIINIKIDVVDVNDCAPSFNADPVVFSVSENAAVGTAVWNFSAVDPDDGSNGAIQYTLT 1411
Query: 142 EDIP---FVVDANTGDIRTNKALDYEKQ 166
P F ++AN+G + LD+E+
Sbjct: 1412 HQWPVGAFKINANSGILTLINPLDHEQH 1439
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PED 143
VNI + D+ND PEF ++ + SV E + G + HA D D G N V Y + P+
Sbjct: 830 VNITIGDVNDNAPEFDTVVVKISVAENAELGSPIYAAHAHDDDSGDNGAVIYQLLTNPDG 889
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLY 169
+ F +D G I + LD+E Q Y
Sbjct: 890 L-FKIDPRQGFIMLTRKLDFETTQKY 914
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 22/182 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA--------ASYFNLDPAT 70
Y A + E G ++ + ATD D G+ V Y L + TDA Y N
Sbjct: 2327 YRASLPELTEPGYAVLSINATDADKGENARVRYSLAISPTDAFYISEETGVIYTNQTLTF 2386
Query: 71 EHQGPI-------QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAV 120
+ P+ QD G LSS V I++ D+N+ P+F Y + E G V
Sbjct: 2387 NPRQPVLQLVVKAQDRGRPSLSSVVAVRIQIADVNNNAPKFSQDVYTAHISEDATRGTIV 2446
Query: 121 GRVHATDADEGQ-NAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
V A D+DE + N + YS+ + F + ++TG+I K +D E+ ++ +V +
Sbjct: 2447 LHVSAADSDETRDNHNIDYSIENGNINSTFQITSDTGEILLVKTVDREEISVFNLKVLAM 2506
Query: 177 SK 178
+
Sbjct: 2507 DR 2508
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 21/171 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRL---------LDNNTDAAS---YFNLDPATEHQGPIQDEG 80
+M V+ATD D G + Y L +DN T + +F+ + + ++
Sbjct: 1811 VMTVQATDADRGHNAKITYSLSNETQWLFKIDNETGVLTTTGHFDRERRGSYTFEVRATD 1870
Query: 81 G-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNA 134
G S A ++I +TD+ND P F P+ VP Q + ++ A D DEG
Sbjct: 1871 GGRYDARSEKAQIHITITDVNDNKPVFVKYPFAADVPAFTQPNQQLLQIVAEDKDEGPGG 1930
Query: 135 VVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATS 182
V YS+ P + F + +TG + +L E +L+ V K + S
Sbjct: 1931 EVVYSLINQPSNSKFRIHPSTGVVTATNSLTMESGRLFHLEVLATDKGSPS 1981
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 19/101 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------- 71
Y A + +G +++QV ATD D+G G + Y + +D S F +DP T
Sbjct: 215 YFASVAENATIGTSVLQVFATDTDAGDNGRITYSINRRQSDRDSVFVIDPLTGVISVNRP 274
Query: 72 --------HQGPI--QDEG--GLSSTATVNIRVTDINDKNP 100
H+ + D G L +TA V+IRVTD+ND P
Sbjct: 275 LDFETKEVHELVVVASDSGVQALETTAFVSIRVTDVNDNQP 315
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 77 QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
Q EG L ATV + + D ND P F Y +V EG + G V +V ATD D G N
Sbjct: 2089 QAEGASPLYGYATVWVDLLDQNDNAPRFTQDSYTSAVWEGNNKGTFVMQVSATDGDMGAN 2148
Query: 134 AVVYYSVPE---DIPFVVDAN-TGDIRTNKALDYEKQQLY 169
A + Y + + D FV++ +G ++TN LD E + Y
Sbjct: 2149 ANIIYHIVDGNHDNAFVIEPPFSGIVKTNIVLDREIRDFY 2188
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 24/174 (13%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYR-LLDNNTDAASYFNLDPAT---------EHQ 73
R++ G +++++A D D G + Y ++ ++TD F +D +T +H+
Sbjct: 1167 REELPAGTEVVRIRAVDTDEGNNASITYSFVIGDDTDGLEAFTIDESTGTIRTKVTLDHE 1226
Query: 74 G--------PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR 122
++D G + + I V D+ND P F + + F V EG G +G
Sbjct: 1227 ERAFYRLAVSVKDHGRPPKETVRQLQIEVLDLNDNRPTFSTSSFAFKVVEGVPIGQEIGT 1286
Query: 123 VHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A D + G+N V Y++ F ++ TG + + +D E Y +V
Sbjct: 1287 VIAEDREAGENERVTYTLLSGNAYGSFDINKTTGALFVAREIDREAVAQYTLQV 1340
Score = 39.3 bits (90), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 63/164 (38%), Gaps = 23/164 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASYFN-LDP--------- 68
+G + A D D G G ++Y L ++ N+ + N LD
Sbjct: 1386 VGTAVWNFSAVDPDDGSNGAIQYTLTHQWPVGAFKINANSGILTLINPLDHEQHPEFTVV 1445
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDA 128
T P + L+S+ T I V D ND P F S + + G + V A D
Sbjct: 1446 VTASDQPENEADRLTSSVTARILVEDFNDNAPVFVSRTRVDIMEDEPVGYPLLHVIAVDR 1505
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D N V YS+ ED F +D +G + + LD E Q Y
Sbjct: 1506 DARDNGRVSYSIVSGNEDGAFSLDVASGVLAVTRPLDRESQNRY 1549
>gi|301604928|ref|XP_002932104.1| PREDICTED: protocadherin Fat 4 [Xenopus (Silurana) tropicalis]
Length = 3255
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 76/164 (46%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ ATD D G LV Y ++ D+ F +DP + E +
Sbjct: 37 GSKIMQLTATDADEGPNALVTYTIISGADDS---FRIDPESGDLIATKRLDRERRSKYSL 93
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQ 132
D+G SS +NI ++D+ND P+F Y F V E G V + ATD D G
Sbjct: 94 LVRADDGLQSSDMRINITISDVNDHIPKFSRAVYSFDVAEDTIPGSIVAAILATDDDSGV 153
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y+V +D F ++ TG +ALDYE QQ Y+ V
Sbjct: 154 NGEITYAVSDDDDDGIFFLNPVTGVFNVTRALDYELQQYYVLTV 197
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 78/162 (48%), Gaps = 22/162 (13%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNN----------TDAASYF-NLD--PATEHQGP 75
+G + + A D+D+ G++ Y + N T A S NLD +H
Sbjct: 1384 VGTVIRTISARDRDASMNGIIAYNISSGNEAGLFAINASTGALSLLKNLDYELCQKHDLT 1443
Query: 76 IQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADE 130
I D G ++ T V I V D+ND P F++ Y SV E G V R++ATD D
Sbjct: 1444 ISAVDGGWVAKTGYCVVTIYVKDVNDNPPIFKADEYFPSVMENAPSGTTVIRLNATDVDS 1503
Query: 131 GQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
NAV+ YSV D+ FV+D NTG I T LDYE +Q Y
Sbjct: 1504 APNAVIAYSVQSSDSDL-FVIDPNTGIITTQGFLDYETKQHY 1544
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 27/164 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------------- 70
G L+Q+ A+D D G G+V Y ++D N ++ F +D T
Sbjct: 451 GTDLIQLIASDADEGINGMVRYAIIDGN--PSNEFRIDSVTGVLSIARPLDRERKSSYTL 508
Query: 71 EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA--VGRVHATDA 128
+ Q + S TATV+I ++DIND P+F+ PY SVPE + L + +V A D
Sbjct: 509 KIQASDRGSSPRSDTATVSILLSDINDVVPKFELSPYTVSVPENLETLPKIILQVVARDD 568
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
D+G N+ + YS+ ED F + +++G + K+LD E ++ Y
Sbjct: 569 DQGLNSRLTYSLASGNEDGAFTL-SSSGQLSLIKSLDREVKEWY 611
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 71/159 (44%), Gaps = 18/159 (11%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LDPATEHQGPIQ---- 77
++ + A DKDSG G VEY + D N +A N LD Q +
Sbjct: 967 ILTISAEDKDSGSNGQVEYTIFDGNKEAFFSINRVNGEIRNTRQLDREKASQYTLSVKAS 1026
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAV 135
D+G SS V I V D ND P F + F G V +V +D D G NA+
Sbjct: 1027 DKGSPARSSIVKVIIYVLDDNDNAPRFSQIFSAFVAENAVLGCFVTQVTTSDEDAGANAI 1086
Query: 136 VYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
Y++ + +PF ++ NTG I ++ L+ E Y+ RV
Sbjct: 1087 SRYTIADTSLPFHINLNTGVITVSRPLNREDNDRYIVRV 1125
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 72/165 (43%), Gaps = 18/165 (10%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQG 74
S + A + LG + QV +D+D+G + Y + D T + NL+
Sbjct: 1054 SQIFSAFVAENAVLGCFVTQVTTSDEDAGANAISRYTIAD--TSLPFHINLNTGVITVSR 1111
Query: 75 PIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAV 120
P+ E G + + V I VTD+ND P F Y PE D G V
Sbjct: 1112 PLNREDNDRYIVRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSKPSYYLDYPETLDIGSKV 1171
Query: 121 GRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
+V ATD+DEG N VYY + F +++ TG+I + L Y+
Sbjct: 1172 TQVFATDSDEGLNGHVYYFIKSQSELFRINSTTGEIFNKQHLKYQ 1216
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 20/161 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +ATD DSG ++Y LL + + S +D G + +D
Sbjct: 350 VFRAQATDPDSGPNSYIQYSLLGSLGNKFSIGIIDGEVRLTGELDREDISNYTLTIIAKD 409
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ +NI V DIND +P F ++ + E G + ++ A+DADEG N +
Sbjct: 410 KGEPSLSSSMDMNIIVLDINDNSPHFSQRHFKVEISESTLTGTDLIQLIASDADEGINGM 469
Query: 136 VYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
V Y++ + P F +D+ TG + + LD E++ Y ++
Sbjct: 470 VRYAIIDGNPSNEFRIDSVTGVLSIARPLDRERKSSYTLKI 510
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ ATDADEG NA+V Y++
Sbjct: 5 AKVEITLQDINDNPPVFPTDILDLTVEENVGDGSKIMQLTATDADEGPNALVTYTIISGA 64
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ K LD E++ Y
Sbjct: 65 DDSFRIDPESGDLIATKRLDRERRSKY 91
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 69/159 (43%), Gaps = 28/159 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAA---------------------SYFNLDPATE 71
++QV A D D G + Y L N D A Y L AT+
Sbjct: 560 ILQVVARDDDQGLNSRLTYSLASGNEDGAFTLSSSGQLSLIKSLDREVKEWYSLLITATD 619
Query: 72 HQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE 130
P L+ T T++I+V DIND P F + ++PE G + V+ +D+D
Sbjct: 620 AGFP-----ALTGTGTISIQVEDINDNKPTFALNHHFITIPEDAPTGTDILMVNCSDSDA 674
Query: 131 GQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
GQN V+ + + F ++ +TG I ++ LD E + Y
Sbjct: 675 GQNGVIRLN-GGNSQFTINPSTGQIISSSLLDREAKDHY 712
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 32/164 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++++ ATD DS ++ Y + +++D F +DP T G I +G L
Sbjct: 1490 GTTVIRLNATDVDSAPNAVIAYSVQSSDSD---LFVIDPNT---GIITTQGFLDYETKQH 1543
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S TV +++ N+ P F S Y F V E G VG V A+
Sbjct: 1544 YHLTVKAFNVPDEERCSFVTVTVQLEGANEYVPRFVSKLYYFEVSEAAPKGTVVGEVFAS 1603
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQ 167
D D G + V+Y + F +D TG I + LD EK++
Sbjct: 1604 DRDGGIDGDVHYLIFGSSRKKGFQIDKKTGKISVSGILDREKEE 1647
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 28/155 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT--------------EHQG- 74
G ++ V +D D+G+ G++ RL N S F ++P+T +H
Sbjct: 661 GTDILMVNCSDSDAGQNGVI--RLNGGN----SQFTINPSTGQIISSSLLDREAKDHYTL 714
Query: 75 -PIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDAD 129
I +GG L+ST V + + D+ND P F PY +P G V V TD D
Sbjct: 715 LVIATDGGSPPLTSTTNVTVNIRDVNDNPPRFLHHPYVTHIPSPTTAGSFVFAVTVTDED 774
Query: 130 EGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALD 162
G NA +++S+ F +D G IRT A++
Sbjct: 775 IGSNAELHFSLKGRNSEKFHIDPLRGAIRTAGAIE 809
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRLLDNNTDA-------------ASYFNLDPATEHQ 73
++G L++V A D KD G V Y L N AS +D +
Sbjct: 1277 KIGTKLIKVTAVDDKDFGLNSEVGYSLSTENIHGKFQIDKETGWITVASSLMMDINKNYM 1336
Query: 74 GPI--QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+ +D+G LSS A VNI VT+ N PEF +V E G + + A D
Sbjct: 1337 IKVFAKDKGNPPLSSQALVNITVTEENYHTPEFSQSHVSVTVLESLSVGTVIRTISARDR 1396
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
D N ++ Y++ E F ++A+TG + K LDYE Q +
Sbjct: 1397 DASMNGIIAYNISSGNEAGLFAINASTGALSLLKNLDYELCQKH 1440
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV- 140
SS + I V D+ND P+F+ P+ + E + + A D D G N V Y++
Sbjct: 929 FSSYEKLEITVLDVNDNQPQFKQDPFIAEIIENLSPRKILTISAEDKDSGSNGQVEYTIF 988
Query: 141 --PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ F ++ G+IR + LD EK Y
Sbjct: 989 DGNKEAFFSINRVNGEIRNTRQLDREKASQY 1019
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 68/158 (43%), Gaps = 18/158 (11%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY-------FNLDPATEHQ--------G 74
G + + ATD DSG G + Y + D++ D + FN+ A +++
Sbjct: 138 GSIVAAILATDDDSGVNGEITYAVSDDDDDGIFFLNPVTGVFNVTRALDYELQQYYVLTV 197
Query: 75 PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQN 133
QD GG S V + D+ND P F Y SV E G + + TDAD+G N
Sbjct: 198 CAQDGGGQDSCVRVYFNILDVNDNPPVFSRNSYSASVMENLPPGSTILTFNVTDADDGFN 257
Query: 134 AVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ + Y++ + + + G + + LD E Q Y
Sbjct: 258 SKLSYTISSGDSMGQFQVSKDGTLSVLQLLDRETQSFY 295
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 75/176 (42%), Gaps = 30/176 (17%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEY------RLLDNNTDAASYFNLDPATEHQGP------ 75
++G + QV ATD D G G V Y L N+ FN ++Q P
Sbjct: 1166 DIGSKVTQVFATDSDEGLNGHVYYFIKSQSELFRINSTTGEIFN-KQHLKYQNPSVSGNI 1224
Query: 76 ----------IQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGR 122
D G + S TV+I + D ND P+F S Y V + + G + +
Sbjct: 1225 NINRHSFIVSASDRGSPPIMSETTVSINIVDSNDNAPKFSSTKYFTPVSKNAKIGTKLIK 1284
Query: 123 VHAT-DADEGQNAVVYYSVP-EDI--PFVVDANTGDIRTNKALDYEKQQLYLERVF 174
V A D D G N+ V YS+ E+I F +D TG I +L + + Y+ +VF
Sbjct: 1285 VTAVDDKDFGLNSEVGYSLSTENIHGKFQIDKETGWITVASSLMMDINKNYMIKVF 1340
>gi|410919675|ref|XP_003973309.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
[Takifugu rubripes]
Length = 2988
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 83/180 (46%), Gaps = 26/180 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y R+ E+G ++ V+ATD D+ G + YR++++N + F +D +
Sbjct: 373 YKENIRENLEIGYEVLTVRATDGDAPVNGNILYRIINSN-GSNDVFEIDSRSGVIRTKGL 431
Query: 71 -------------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-D 116
E +D G S+TATV+I V D ND P+F Y VPE
Sbjct: 432 VDREQVEAYMLLVEANDQGRDPGPRSATATVHIVVEDDNDNAPQFSEKRYVVQVPEDMAP 491
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ +V ATD D G NAVV++S+ F +DA TG + LDYE + Y R+
Sbjct: 492 NTEILQVTATDQDRGSNAVVHFSIMSGNTRGQFYIDAQTGKMDLVSHLDYETNKEYTLRI 551
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY 137
+G L TA V + VTD N P FQS Y ++ E + G V + ATD D G+NA +
Sbjct: 766 DGTLFDTAKVFVNVTDANTHRPVFQSSHYTVNINEDRSVGTTVVLISATDEDTGENARIT 825
Query: 138 YSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
Y + + IP F +D +TG + T LDYE Q Y
Sbjct: 826 YFMDDSIPQFDIDPDTGAVTTQMELDYEDQVSY 858
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 22/159 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNT-------------DAASYFNLDPATEHQGPIQDE 79
++QV ATD+D G +V + ++ NT D S+ + + E+ I+ +
Sbjct: 495 ILQVTATDQDRGSNAVVHFSIMSGNTRGQFYIDAQTGKMDLVSHLDYETNKEYTLRIRAQ 554
Query: 80 GG----LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
G LS+ + V ++V D+ND P F S P++ +V E G ++ + A DAD G N
Sbjct: 555 DGGRPPLSNISGLVTVQVLDVNDNAPIFVSTPFQATVLENVPLGYSIIHIQAVDADSGDN 614
Query: 134 AVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
+ + Y + + PF ++ +TG I LD E Y
Sbjct: 615 SRLEYRLTATTPNFPFSINNSTGWIVVAAELDRESVDFY 653
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 74/161 (45%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLD----PATEHQGP 75
+++QV ATD+DS G V Y + + LD P Q
Sbjct: 910 SVVQVSATDRDSALNGRVFYTFQGGDDGDGDFIIESTSGIVRTLRRLDRENVPVYSLQAF 969
Query: 76 IQDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G + VNI VT D+ND P F+ + V E GL VG V ATD DEG
Sbjct: 970 AVDKGVPALKTPVNIHVTILDVNDNPPVFEKDELDIMVEENSPIGLVVGHVSATDPDEGS 1029
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ + LDYE + Y+
Sbjct: 1030 NAQIMYQIVEGNIPEVFQLDIFSGELTSLIDLDYETKNEYV 1070
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 28/187 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEH 72
S Y + +G T++ + ATD+D+G+ + Y +D D+ F++DP A
Sbjct: 791 SSHYTVNINEDRSVGTTVVLISATDEDTGENARITY-FMD---DSIPQFDIDPDTGAVTT 846
Query: 73 QGPIQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQD 116
Q + E +S T + R V D+ND +P F Y SV E
Sbjct: 847 QMELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNSPRFLRDHYTGSVMEDVP 906
Query: 117 GL-AVGRVHATDADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLYLE 171
+V +V ATD D N V+Y+ F++++ +G +RT + LD E +Y
Sbjct: 907 VFTSVVQVSATDRDSALNGRVFYTFQGGDDGDGDFIIESTSGIVRTLRRLDRENVPVYSL 966
Query: 172 RVFLISK 178
+ F + K
Sbjct: 967 QAFAVDK 973
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 31/169 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEY---RLLDNNTDAASYFNLDPATEHQGPIQ--------- 77
G ++ +KA D D G+ G +EY L D+ ++ + F +DPA ++
Sbjct: 276 GTPVVVLKAVDVDEGEAGRLEYFIEALFDSRSN--NLFAVDPANGAVSTVEVLDRETKDT 333
Query: 78 --------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
D G ++ AT+ + V D ND +P F+ Y+ ++ E + G V V AT
Sbjct: 334 HVFRVTAVDHGVPRRTAMATLTVTVGDTNDHDPAFEQQDYKENIRENLEIGYEVLTVRAT 393
Query: 127 DADEGQNAVVYYSV-----PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D D N + Y + D+ F +D+ +G IRT +D E+ + Y+
Sbjct: 394 DGDAPVNGNILYRIINSNGSNDV-FEIDSRSGVIRTKGLVDREQVEAYM 441
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 28/168 (16%)
Query: 22 MARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPAT 70
M + +G+ + V ATD D G + Y++++ N + S +LD T
Sbjct: 1006 MVEENSPIGLVVGHVSATDPDEGSNAQIMYQIVEGNIPEVFQLDIFSGELTSLIDLDYET 1065
Query: 71 EHQGPI---QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGL 118
+++ I L S ATV+I++ D ND P ++ F S P G
Sbjct: 1066 KNEYVIVVQATSAPLVSRATVHIKLVDKNDNVPVLKNFQIIFNNYVTDKSSSFPTG---- 1121
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
+GR+ A D D + V ++ V ++ +TG+I+ ++ALD +
Sbjct: 1122 VIGRIPAYDPDVSDQLHYSFEVGNELNLVLLNQSTGEIQLSQALDNNR 1169
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 68/169 (40%), Gaps = 33/169 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNT-----------DAASYFNLD 67
LG +++ ++A D DSG +EYRL ++N+T ++ ++N
Sbjct: 597 LGYSIIHIQAVDADSGDNSRLEYRLTATTPNFPFSINNSTGWIVVAAELDRESVDFYNFG 656
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHAT 126
QG S + TV D+ND NPEF Y + E G +V V A
Sbjct: 657 VEARDQGYPIMSSSASISMTV----LDVNDNNPEFTQKAYYMRLNEDAAVGTSVVTVSAV 712
Query: 127 DADEGQNAVVYYSVPED-----IPFVVDANTGDIRTNKALDYEKQQLYL 170
D D N+VV Y + + G I LDY+ ++ Y+
Sbjct: 713 DQD--INSVVTYQISSGNTRNRFSITSQSGGGLITLALPLDYKLERQYV 759
>gi|348519324|ref|XP_003447181.1| PREDICTED: neural-cadherin-like [Oreochromis niloticus]
Length = 2850
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 82/185 (44%), Gaps = 31/185 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD-------- 67
S Y A + ++G +++QV A DKD G G + Y LL +++ + F +D
Sbjct: 1030 SSIYEASVTEGAQIGTSVLQVSAHDKDLGLNGEITYSLLSDSSGDHNLFRIDSELGIIYT 1089
Query: 68 -------PATEHQGPIQDEGGLSS------------TATVNIRVTDINDKNPEFQSLPYE 108
+ + +Q E G S TA V + ++D+ND P F YE
Sbjct: 1090 EAVFDREARSSYLLEVQSEDGQESARPGKNKQPNTDTAYVRVFISDVNDNKPVFAQRLYE 1149
Query: 109 FSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
V E D GLAV V A D DEG NA + Y + F ++ G I + LDYE
Sbjct: 1150 VGVDENADVGLAVVTVSANDEDEGANAKLRYQITSGNKGGVFDIEPEVGTIFIAQPLDYE 1209
Query: 165 KQQLY 169
+Q+ Y
Sbjct: 1210 QQKRY 1214
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 26/165 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------ATEHQGPIQDEGGL 82
G ++QV A D D G G V+Y L+ ++ A F + P A Q E +
Sbjct: 726 GTFVLQVHAVDADEGANGKVKYGLMHRDS-AMPAFRIHPDTGVIVTARRFDRERQREYSI 784
Query: 83 SSTAT------------VNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
+ TAT + I++ D ND +P+F++L YE+ + E G + RV A D D
Sbjct: 785 TVTATDWAEEPLIGICQLTIQILDQNDNSPKFENLRYEYFLREDTLVGTSFLRVAAHDDD 844
Query: 130 EGQNAVVYYSVPEDIPFVVDAN--TGDIRTNKALDYEKQQLYLER 172
G NA + Y++ + P + N TG + N+ + Q+ Y+ R
Sbjct: 845 FGTNAAITYAMSLEQPEYLQVNPITGWVYVNQPI---SQRTYITR 886
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV 140
L++ V + +TD+ND P F S YE SV EG Q G +V +V A D D G N + YS+
Sbjct: 1008 LAAFTRVYVNITDVNDNVPFFTSSIYEASVTEGAQIGTSVLQVSAHDKDLGLNGEITYSL 1067
Query: 141 PEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERV 173
D F +D+ G I T D E + YL V
Sbjct: 1068 LSDSSGDHNLFRIDSELGIIYTEAVFDREARSSYLLEV 1105
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 82 LSSTATVNIRVTDINDKNP---EFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVY 137
LSSTA V + V D+N+ P E Q + SV E Q G V +VHA DADEG N V
Sbjct: 687 LSSTARVIVGVDDVNNNKPIFEECQQYREQASVLENQPTGTFVLQVHAVDADEGANGKVK 746
Query: 138 YSVPED---IP-FVVDANTGDIRTNKALDYEKQQLY 169
Y + +P F + +TG I T + D E+Q+ Y
Sbjct: 747 YGLMHRDSAMPAFRIHPDTGVIVTARRFDRERQREY 782
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 28/165 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDN--NTDAASYFNLDPAT---------------- 70
L V +M V D G+ ++ Y++ +N N D+ F +D +T
Sbjct: 1372 LVVEMMAVDLDDAAVGQNAILTYKITENSQNADSVDLFIIDSSTGTISVAAEGLDRERAD 1431
Query: 71 EHQGPIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATD 127
H ++ D GG++ TATV I VTDIND P+F+ VPE + A + + A D
Sbjct: 1432 THHVVVEARDGGGMTGTATVTIVVTDINDHVPKFREDWCGARVPESTNEDAPILELSAVD 1491
Query: 128 ADEGQNAVVYYSV----PEDIPFVVD---ANTGDIRTNKALDYEK 165
D G + +SV E ++V G +R K LD+E+
Sbjct: 1492 PDAGSYGHLAFSVTAGDSEQRFYMVSHRLEQRGTLRLKKKLDFEQ 1536
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Query: 67 DPATEHQGPIQDEGGLSS-TATVNIRVTDINDKNPEFQSLPYEFSV---PEGQDGLAVGR 122
+P E IQD+ G V +++TD+ND PE+ PY + PE G V +
Sbjct: 260 EPFVELTVKIQDKRGPDWYLNKVKLKITDVNDNVPEWNMKPYPYLAVVSPEAPAGTFVYQ 319
Query: 123 VHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
+ A D DEG++ V Y + + D F VD TG + T + L ER +L+S A
Sbjct: 320 LQAHDGDEGKSGEVEYFLSDGGDGCFAVDKKTGQVVTTGLV------LQREREYLLSVVA 373
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 18/162 (11%)
Query: 21 AMARDKHELGVTLM----QVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI 76
A++ K ++ +L+ + + +++G+ L R LD D Y + A+E
Sbjct: 421 AISFQKQQISYSLLINPSSLFSIQQETGEISLT--RTLDYENDQRRYLLMVRASE----- 473
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEG-QDGLAVGRVHATDADEGQNA 134
+ G LS+ V + +TD ND PEF QS+ +PE ++ +V ATD D G NA
Sbjct: 474 -EPGSLSTATEVQVLITDENDCVPEFLQSIYSVDGIPETVTTATSLLQVLATDCDSGLNA 532
Query: 135 -VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
+ YY++ D F + + G + + LDYE+ E V +
Sbjct: 533 ELTYYTLSPD--FSISPH-GTVFPARRLDYERPNHLYEFVVM 571
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 80/182 (43%), Gaps = 36/182 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDS-GKFGLVEYRLLDNNTDAASYFNLDPAT------ 70
+YG++ + V ++QV ATD D G + Y + + A S+F ++ T
Sbjct: 1250 YYGSVTEELDGSPVFVLQVTATDPDKDADQGAIRYSI--HGQGAESHFMINDITGEMYAQ 1307
Query: 71 -----EHQGPIQ-------DEG-GLSSTATVNIRVTDINDKNPEFQSLP--YEFSVPEGQ 115
E + + +EG GL+ V I V DIND P F P SV E
Sbjct: 1308 RTLDREERAVWRFVVMATDEEGEGLTGFTDVIINVWDINDNAPTFSCAPDNCHSSVAENS 1367
Query: 116 -DGLAVGRVHATDADE---GQNAVVYYSVPEDIP-------FVVDANTGDIRT-NKALDY 163
G V + A D D+ GQNA++ Y + E+ F++D++TG I + LD
Sbjct: 1368 PPGTLVVEMMAVDLDDAAVGQNAILTYKITENSQNADSVDLFIIDSSTGTISVAAEGLDR 1427
Query: 164 EK 165
E+
Sbjct: 1428 ER 1429
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT--EHQGPIQ---------DEG 80
+L+QV ATD DSG + Y L + + + + PA +++ P D G
Sbjct: 517 SLLQVLATDCDSGLNAELTYYTLSPDFSISPHGTVFPARRLDYERPNHLYEFVVMAVDSG 576
Query: 81 G--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE--GQDGLAVGRVHATDADEGQNAVV 136
S TATV +R+ ++ND+ PEF Y V E G + L V V A D D + ++
Sbjct: 577 DEPHSGTATVRVRMANVNDEAPEFSQPVYRTFVSEDAGPNTL-VATVLAKDPD--GDGII 633
Query: 137 YYSVP--EDIPFVVDANTGDIR 156
Y E+ FV+D+ G IR
Sbjct: 634 YSITAGNEEENFVIDSQKGLIR 655
Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 24/164 (14%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP- 75
++G+ ++ V A D+D G + Y++ N F+++P E Q
Sbjct: 1157 DVGLAVVTVSANDEDEGANAKLRYQITSGN--KGGVFDIEPEVGTIFIAQPLDYEQQKRY 1214
Query: 76 ----IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG--LAVGRVHATDAD 129
+ +G A V + V + ND+ P F Y SV E DG + V +V ATD D
Sbjct: 1215 KLLILASDGKWEDYAAVVVTVVNKNDEAPVFSMNEYYGSVTEELDGSPVFVLQVTATDPD 1274
Query: 130 -EGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ + YS+ + F+++ TG++ + LD E++ ++
Sbjct: 1275 KDADQGAIRYSIHGQGAESHFMINDITGEMYAQRTLDREERAVW 1318
Score = 39.3 bits (90), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 8/116 (6%)
Query: 44 GKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLS-STATVNIRVTDINDKNPEF 102
G L R+LD T + +L + P G + A+V + V D ND P F
Sbjct: 22 GNVLLRTSRVLDRETRSEYLLSLGLCCQTCAP----GSIVFDVASVKVDVLDTNDHEPTF 77
Query: 103 QSLPYEFSVPEGQDGL--AVGRVHATDADEGQNA-VVYYSVPEDIPFVVDANTGDI 155
+S L V R+ A DAD G+NA + Y SVP++ F V TG++
Sbjct: 78 RSADNIHISLHDTTALRSVVYRLEAVDADSGKNAELTYISVPQNGSFYVVPKTGEV 133
Score = 35.8 bits (81), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 69/174 (39%), Gaps = 32/174 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A+ + G + Q++A D D GK G VEY L D F +D T
Sbjct: 303 YLAVVSPEAPAGTFVYQLQAHDGDEGKSGEVEYFLSDGGDGC---FAVDKKTGQVVTTGL 359
Query: 71 ------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV----PEGQDGLAV 120
E+ + G+ S + + + P+F + Y S+ PEGQ L V
Sbjct: 360 VLQREREYLLSVVALDGMGSRSAPAMLSVVAGARAPQFTNTSYAISIPENTPEGQPFLVV 419
Query: 121 GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEK-QQLYL 170
+ Q + YS+ P + F + TG+I + LDYE Q+ YL
Sbjct: 420 FAISF------QKQQISYSLLINPSSL-FSIQQETGEISLTRTLDYENDQRRYL 466
>gi|426229713|ref|XP_004008932.1| PREDICTED: protocadherin alpha-C2 isoform 3 [Ovis aries]
Length = 686
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 69/147 (46%), Gaps = 13/147 (8%)
Query: 34 MQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVT 93
+ VK DS + GLV + LD + NL QG + L+ T + I V
Sbjct: 180 LDVKTNSDDSTQIGLVLRKSLDR--EEVPEHNLLLMATDQGKPE----LTGTVQLLITVL 233
Query: 94 DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------F 146
D+ND P F YE + E D G V RV+A+D DEG N + YS +P F
Sbjct: 234 DVNDNAPNFGQSEYEVKIFENSDNGTIVIRVNASDRDEGANGEISYSFNNLVPATVSNQF 293
Query: 147 VVDANTGDIRTNKALDYEKQQLYLERV 173
+DANTG+I LDYE LY R+
Sbjct: 294 RIDANTGEIVIQGNLDYENMNLYKIRI 320
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LS+TA+V++ V D+ND P F Y V E G + V A DAD +NA+V YS+
Sbjct: 435 LSATASVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSARDADAQENALVSYSL 494
Query: 141 PED-------IPFV-VDANTGDIRTNKALDYEKQQL 168
E +V V A +G + + LD+E+ +L
Sbjct: 495 VERRVGERALSSYVSVHAESGKVYALQPLDHEELEL 530
>gi|395511793|ref|XP_003760136.1| PREDICTED: cadherin-19 [Sarcophilus harrisii]
Length = 771
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 84/183 (45%), Gaps = 30/183 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------EHQGPIQDE--- 79
G +++QV ATD D +G RL+ YF ++P T + +D+
Sbjct: 164 GTSVIQVTATDNDDPSYG-NNARLIYTLLQGRPYFTVEPTTGILRISSQMDREAKDQYLV 222
Query: 80 -----------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
GGLS T TV I ++D+ND P FQ Y +V E G ++G + A D
Sbjct: 223 VVQATDMLGLPGGLSGTTTVTINLSDVNDNRPIFQLGLYHMNVSESAPVGTSIGIIMAED 282
Query: 128 ADEGQNAVVYYSVPEDIPFVVDANT------GDIRTNKALDYEKQQLYLERVFLISKFAT 181
+D G+NA + YS+ ED + D T G + K LDYE+Q+ Y R + + F
Sbjct: 283 SDIGENAKMNYSI-EDGSHIFDIITNNETQEGIVVLKKKLDYEQQRQYSVRAKVTNSFID 341
Query: 182 SYL 184
Y
Sbjct: 342 EYF 344
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PYE +PE +G +V +V ATD D+ G NA + Y++ + P
Sbjct: 136 IKVLDINDNKPQFLDGPYETRIPEMSPEGTSVIQVTATDNDDPSYGNNARLIYTLLQGRP 195
Query: 146 -FVVDANTGDIRTNKALDYEKQQLYL 170
F V+ TG +R + +D E + YL
Sbjct: 196 YFTVEPTTGILRISSQMDREAKDQYL 221
>gi|348500126|ref|XP_003437624.1| PREDICTED: cadherin-8 [Oreochromis niloticus]
Length = 798
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 91/188 (48%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++ V ATD D +G +L+ + + YF++DP +
Sbjct: 173 YHAAVEEMSAVGTSVITVTATDADDPVYG-NSAKLVYSILEGQPYFSVDPNSATIRIALH 231
Query: 71 --------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE--- 113
++Q IQ + GGLS T TV+I + DIND P+F YEF +PE
Sbjct: 232 GMDREMREDYQVVIQAKDMGGHMGGLSGTTTVSITLQDINDNPPKFSKSLYEFVIPEDLP 291
Query: 114 -GQDGLAVGRVHATDADEGQNAVVYYSVPED-----IPFVVDANT--GDIRTNKALDYEK 165
G++G G+V A D D G+NA YS+ E + +A T G ++ K LDYE
Sbjct: 292 LGKEG---GKVKANDRDIGENAKSTYSIIEGDDQGVFEIITNATTQEGILQLRKPLDYES 348
Query: 166 QQLYLERV 173
++ Y +V
Sbjct: 349 KRNYTLKV 356
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +V E G +V V ATDAD+ G +A + YS+ E P
Sbjct: 156 IKVQDINDNAPKFTEGPYHAAVEEMSAVGTSVITVTATDADDPVYGNSAKLVYSILEGQP 215
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD N+ IR +D E ++ Y
Sbjct: 216 YFSVDPNSATIRIALHGMDREMREDY 241
Score = 35.8 bits (81), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 24/47 (51%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADE 130
S A V IRV DIND PEF + F G+ G + V A D D+
Sbjct: 477 SRAVVAIRVMDINDNAPEFATEYEAFLCENGKPGQVIQTVSAVDKDD 523
>gi|242397490|ref|NP_001156415.1| dachsous 1 precursor [Mus musculus]
Length = 3291
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 28/162 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGP- 75
G +++V A D D G G + Y L +F++DP + E Q
Sbjct: 483 GSFVVRVTARDPDQGTNGQITYSLAPGTH--THWFSIDPTSGIITTAATLDYELEPQPQL 540
Query: 76 --IQDEGGLS---STATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ +GGL S+ATV++ + D+ND P+FQ Y S+PEG Q G +V ATDAD
Sbjct: 541 IVVATDGGLPPLVSSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDAD 600
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEK 165
G ++ YS+ + PF +DA++GD+ T + LD ++
Sbjct: 601 SGPFGLLSYSLGAGLGASGSPPFRIDAHSGDVCTTRTLDRDQ 642
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 22/161 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN--NTDAASYFNLDPAT--- 70
SL ++A ++ G + + A D D+G FG + Y LL+ + F+L+ +T
Sbjct: 2702 SLLSTSLAENQPP-GTLVTTLHAIDGDAGTFGRLRYSLLEAVPGPEGREAFSLNSSTGEL 2760
Query: 71 --------EHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
EH G + D G LS++ TV++ +T ++ +P F + + F VPEG Q
Sbjct: 2761 RARVPFDYEHTGSFRLLVGAADAGNLSASVTVSVLITGEDEYDPVFLAPSFHFQVPEGAQ 2820
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDI 155
G ++G V ATD D G + +V YS+ P F ++ TG +
Sbjct: 2821 RGHSLGHVQATDEDGGADGLVLYSLATSSPYFGINQTTGAL 2861
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 74/162 (45%), Gaps = 29/162 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY--------------RLLDNNTDAASY 63
FY A + + G +QV ATD DSG FGL+ Y R+ ++ D +
Sbjct: 576 FYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGASGSPPFRIDAHSGDVCTT 635
Query: 64 FNLDPATEHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEG 114
LD QGP D GGL S V + V D ND P+F Y S+ +
Sbjct: 636 RTLD---RDQGPSSFDFTVTAIDGGGLKSMVYVKVFVADENDNPPQFYPREYAASLSAQS 692
Query: 115 QDGLAVGRVHATDADEGQNA-VVYYSVPEDIP--FVVDANTG 153
G AV RVHA D D+G + + Y+ + + P F +DA++G
Sbjct: 693 TPGTAVLRVHAHDPDQGPHGRLSYHILAGNSPPLFALDAHSG 734
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 24/160 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDA---ASYFNLDPATEHQGP 75
+G L+ V+A+D D G GLV + L LD N+ A + + + +HQ
Sbjct: 2610 VGAELLHVEASDADPGPHGLVHFTLSSGDPLGLFELDENSGALRLSRPLDCETQAQHQLV 2669
Query: 76 IQ--DEGGLS-STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEG 131
+Q D G S V + V D+ND P F S+ E Q G V +HA D D G
Sbjct: 2670 VQAADPAGTHFSLVPVTVEVQDVNDHGPAFPLSLLSTSLAENQPPGTLVTTLHAIDGDAG 2729
Query: 132 QNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYE 164
+ YS+ E +P F ++++TG++R DYE
Sbjct: 2730 TFGRLRYSLLEAVPGPEGREAFSLNSSTGELRARVPFDYE 2769
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL---------------DPATEHQGPI 76
TL ++A+D D G G ++YR+LD ++ A +L +PA + Q
Sbjct: 1761 TLTTLRASDPDGGLNGQLQYRILDGDSSGAFALDLTSGEFGTMRPLDREVEPAFQLQIEA 1820
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQN 133
+D G LS+T V + V D ND P F Y VPE G + ++ A D D+G N
Sbjct: 1821 RDGGQPALSATLLVTVTVLDANDHAPVFPVPSYSVEVPEDAPVGTLLLQLQAHDPDDGDN 1880
Query: 134 AVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSYL 184
V Y + F+++ +G++ T ALD E Y V + A L
Sbjct: 1881 GRVMYYLGAGTAGAFLLEPTSGELSTATALDREHCASYAFSVTAVDGAAAGPL 1933
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 78/178 (43%), Gaps = 30/178 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + R+ G +L+ +KATD D G G V Y + + F+LDP T
Sbjct: 1647 YNVILRENSPPGTSLLTLKATDPDLGANGQVTYGGVSGES-----FSLDPNTGVLTTLRA 1701
Query: 71 ---EHQGPI------QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
E Q I +D G L + TV + V D ND P F + VPEGQD
Sbjct: 1702 LDREEQEEIYLTVYARDRGLPPLLTHITVRVTVEDENDHTPTFGNTHLSLEVPEGQDPQT 1761
Query: 120 VGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQ---QLYLE 171
+ + A+D D G N + Y + + F +D +G+ T + LD E + QL +E
Sbjct: 1762 LTTLRASDPDGGLNGQLQYRILDGDSSGAFALDLTSGEFGTMRPLDREVEPAFQLQIE 1819
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A +++ + DIND P F Y V E G V +V A+DAD G N V Y +
Sbjct: 233 ALLDVTLLDINDHAPAFNQSRYHAVVSESLAPGSPVLQVFASDADAGANGAVTYEINRRQ 292
Query: 143 ---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D PF +DA+TG +R + LD+E+++++
Sbjct: 293 SEGDGPFSIDAHTGFLRLERPLDFEQRRVH 322
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 72/172 (41%), Gaps = 33/172 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ 77
+G L+Q++A D D G G V Y L A F L+P + EH
Sbjct: 1863 VGTLLLQLQAHDPDDGDNGRVMYYL---GAGTAGAFLLEPTSGELSTATALDREHCASYA 1919
Query: 78 ---------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-----GQDGLAVGRV 123
G LS+T + I V D+ND P F + P +P + LA+ +
Sbjct: 1920 FSVTAVDGAAAGPLSTTVPITITVRDVNDHAPAFPTSPLRLRLPRPGPSLNKPTLALATL 1979
Query: 124 HATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNK---ALDYEKQQLYL 170
A D D G NA + Y + P VD+ TG+IR + AL + + L++
Sbjct: 1980 RAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARSPVALGPQDRVLFI 2031
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
SS V + V D+ND P F Y +VPE G + V A+DAD G + +V++++
Sbjct: 2576 SSAVPVTVTVLDVNDNPPVFTRASYRVTVPEDMPVGAELLHVEASDADPGPHGLVHFTLS 2635
Query: 142 EDIP---FVVDANTGDIRTNKALDYEKQ 166
P F +D N+G +R ++ LD E Q
Sbjct: 2636 SGDPLGLFELDENSGALRLSRPLDCETQ 2663
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY 138
G + TATV + + + ND +P P +V E Q G +VGRV ATD D G N + Y
Sbjct: 1077 GQQTGTATVRVIILNQNDHSPRLSEEPTFLAVAENQPPGTSVGRVFATDRDSGPNGRLTY 1136
Query: 139 SVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
S+ + F + TG++ T + LD E+Q +
Sbjct: 1137 SLQQLSEDSKAFRIHPQTGEVTTLQTLDREQQSSF 1171
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 35/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G ++ +V ATD+DSG G + Y L + D+ + F + P T E Q Q
Sbjct: 1115 GTSVGRVFATDRDSGPNGRLTYSLQQLSEDSKA-FRIHPQTGEVTTLQTLDREQQSSFQL 1173
Query: 78 ----DEGG---LSSTATVNIRVTDINDKNPEF--------QSLPYEF--SVPEGQDGLAV 120
+GG S+T TV++ V D+ND +P F LP + VP G V
Sbjct: 1174 LVQVQDGGSPPRSATGTVHVAVLDLNDNSPTFLQASGAAGGGLPIQVPDRVPPGT---LV 1230
Query: 121 GRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ A D DEG+N + Y++ P F + +TG++ T +L ++ Y+
Sbjct: 1231 TTLQAKDPDEGENGTILYTLTGPGSELFSLHPHTGELHTAASLVRAERPHYV 1282
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 70/164 (42%), Gaps = 28/164 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYFN-LDP----------- 68
G + V A D D G+ V YRL L T A S LD
Sbjct: 1554 GPAALHVVARDPDLGEAARVSYRLAAGGDGHFRLHATTGALSVVRPLDREQRAEHVLTVV 1613
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
A +H P + SST + + V D+ND+ P F Y + E G ++ + ATD
Sbjct: 1614 ALDHGSPPR-----SSTQLLTVSVVDVNDEAPAFPQQEYNVILRENSPPGTSLLTLKATD 1668
Query: 128 ADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQ-QLYL 170
D G N V Y F +D NTG + T +ALD E+Q ++YL
Sbjct: 1669 PDLGANGQVTYGGVSGESFSLDPNTGVLTTLRALDREEQEEIYL 1712
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 65/147 (44%), Gaps = 28/147 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------- 68
Y M + G ++ V ATD+DSG G + Y L A F +DP
Sbjct: 2373 LYQVMMLEHTPPGSAILSVSATDRDSGANGHISYHL----ASPAEGFRVDPNNGTLFTTV 2428
Query: 69 ---ATEHQGP--------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG- 114
A H+GP +D G G ++ ATV++++ D ND P F Y +V E
Sbjct: 2429 GAMALGHEGPGVVDVVLEARDHGAPGRTAQATVHVQLKDQNDHAPSFTLPHYRVAVSEDL 2488
Query: 115 QDGLAVGRVHATDADEGQ-NAVVYYSV 140
G + + ATDAD + +A V YS+
Sbjct: 2489 PPGSTLLTLEATDADGSRTHATVDYSI 2515
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG---- 74
Y A + G +++V A D D G G + Y +L N+ F LD H G
Sbjct: 684 YAASLSAQSTPGTAVLRVHAHDPDQGPHGRLSYHILAGNS--PPLFALD---AHSGLLTV 738
Query: 75 --PI--------------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ QD GGL + A VNI + P F+ L Y FSVPE
Sbjct: 739 AWPLGRRANSVVQLEIGAQDGGGLQAEPIARVNISIVPGTPTPPIFEQLQYVFSVPEDVA 798
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
G +VG + A + G+ V ++ P F +D+ +G ++T + LD E LE
Sbjct: 799 PGTSVGIIQAHNP-PGRLGPVTLTLSGGDPRGLFSLDSPSGLLKTLRPLDRELLGPVLE 856
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 70/180 (38%), Gaps = 39/180 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + L L+QV+A D D G G + Y L + A F++DP
Sbjct: 2169 YVAFLPESRPLEGPLLQVEADDLDQGSGGQISYSLAASQP-ARGLFHVDPATGTITTTAI 2227
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
AT+ P L +AT+ + V D ND P P+E V E
Sbjct: 2228 LDREIWAETRLVLMATDRGSP-----ALVGSATLTVMVIDTNDNRPTIPQ-PWELRVSED 2281
Query: 114 GQDGLAVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + +V D D G V++Y S P+D PF + G + LD+E+ Y
Sbjct: 2282 ALLGSEIAQVTGNDVDSG--PVLWYVLSPSGPQD-PFSIGRYGGRVSLTGPLDFEQCDHY 2338
Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 68/173 (39%), Gaps = 31/173 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH----------------- 72
G + ++A D DSG + + LL F +DP T H
Sbjct: 904 GTPIYTLRALDPDSGANSRITFNLLAGGD---GLFTVDPTTGHVRLMGPLGPPGGPAHEL 960
Query: 73 QGPIQDEGGLSSTATVNIRVT----DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+ +D G T+ +RV I+ P F S Y +P G G + +V A
Sbjct: 961 EVEARDGGSPPRTSHFRLRVVIQDLGIHGLAPRFDSPTYRVDLPSGTTTGTQILQVQAQA 1020
Query: 128 ADEGQNAVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D + V Y + D PF +++ +G + ALD E Q+LY +V +S
Sbjct: 1021 PD---GSPVTYHLAADGASSPFGLESQSGWLWVRTALDRESQELYTLKVMAVS 1070
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 44/93 (47%), Gaps = 15/93 (16%)
Query: 82 LSSTATVNIRVTDINDKNPEF-------QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
L + A + VTD+ND P F + LP E ++P G V RV A D D+G N
Sbjct: 446 LRAEAAFVLHVTDVNDNAPAFDRQLYRPEPLP-EVALP----GSFVVRVTARDPDQGTNG 500
Query: 135 VVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
+ YS+ F +D +G I T LDYE
Sbjct: 501 QITYSLAPGTHTHWFSIDPTSGIITTAATLDYE 533
Score = 38.9 bits (89), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD-EGQNAVVYYSVPEDIP 145
V +RV D N+ P F P ++PE D G + A+DAD G N+ V Y + P
Sbjct: 1415 VQVRVQDENEHAPTFARDPLALALPENPDPGATLYTFRASDADGPGPNSEVRYRLLRQEP 1474
Query: 146 FV----VDANTGDIRTNKALDYEKQQLYL 170
V +DA TG + + LD E L
Sbjct: 1475 PVPALRLDARTGALSAPRGLDRETTPALL 1503
>gi|432961282|ref|XP_004086589.1| PREDICTED: protocadherin Fat 4-like [Oryzias latipes]
Length = 4971
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 79/162 (48%), Gaps = 22/162 (13%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LDPATEHQGPIQ 77
+G + V A DKD GL+ Y + N + N LD + Q ++
Sbjct: 3081 VGTAIRTVSAKDKDKEMNGLITYNITSGNDNGVFMLNSKTGVLSLANPLDFEEKQQHELR 3140
Query: 78 ----DEGGLSSTA--TVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADE 130
D G ++ T+ +V I+VTD+ND P F Y +V E G V R++ATD D
Sbjct: 3141 VSAIDGGWIAKTSYVSVTIQVTDVNDNPPIFDPDEYFPTVQENVPSGTTVVRMNATDRDS 3200
Query: 131 GQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G NAV+ Y S D+ FV+D NTG I T LDYE +Q+Y
Sbjct: 3201 GPNAVMAYVIQSSDSDL-FVIDPNTGIITTQGFLDYEAKQVY 3241
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 75/161 (46%), Gaps = 23/161 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F +DP + E +
Sbjct: 1735 GFKIMQLTAKDADEGPNALVTYTIISGADDS---FRIDPESGDLIATKKLDRERRSKYSL 1791
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQ 132
D+G SS +NI V D+ND P+F Y F +PE G V + A+D+D
Sbjct: 1792 LVRADDGKQSSDMRLNITVKDVNDHTPKFSRPTYSFDIPEDVTPGSIVEVILASDSDSEL 1851
Query: 133 NAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
N V YS+ ED F+++ TG +ALDYE Q+ Y+
Sbjct: 1852 NGEVNYSLEEDDEDGTFLLNPVTGVFNVTRALDYETQRYYI 1892
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 79/162 (48%), Gaps = 24/162 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI------------- 76
++ V A D D G G +EY ++D N D + F++ AT P+
Sbjct: 2664 VLLVSAVDLDKGSNGQLEYAIIDGNKD--NIFSIHRATGEIRTNRPLDREKVALYSLKVK 2721
Query: 77 -QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D G S++ V +RV D+ND P F + + +V E G V RV TD D G
Sbjct: 2722 ATDRGSPPKSTSVKVLVRVLDVNDNAPRFSKI-FSATVAENAPVGYTVTRVTTTDEDAGS 2780
Query: 133 NAVVYYSVPED-IPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA+ YS+ + +PF ++ NTGDI N+ L+ E+ Y+ +V
Sbjct: 2781 NAISRYSLTDSGLPFSINPNTGDITINRPLNREETDHYIVKV 2822
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 77/164 (46%), Gaps = 32/164 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++++ ATD+DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3187 GTTVVRMNATDRDSGPNAVMAYVIQSSDSD---LFVIDPNT---GIITTQGFLDYEAKQV 3240
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S A VNI++ N+ P F S Y F V E G VG V A+
Sbjct: 3241 YHLTVKAFNIPDEDRCSFANVNIQLKGANEYVPRFVSKQYYFEVSEAAPKGTVVGEVFAS 3300
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQ 167
D D+G++ VVYY + + F ++ TG I LD EK++
Sbjct: 3301 DRDQGEDGVVYYLIFGKSRNKGFSINKKTGQIYVTGMLDREKEE 3344
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 73/160 (45%), Gaps = 25/160 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH----------------QGPI 76
L++V A+D D K G+V Y + + N +A F +D ++ I
Sbjct: 1205 LLRVSASDVDESKNGVVHYHIAEGNEEAQ--FTIDSSSGQVTLVGKLDYESSSSYLLKII 1262
Query: 77 QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQ 132
D+ G LSS+ ++I + D ND +P F V E + G V V ATDAD GQ
Sbjct: 1263 ADDAGDVPLSSSCMLSISILDENDNSPSFPKSSLSVDVLENMRIGDLVVSVTATDADSGQ 1322
Query: 133 NAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
NA + YS+ F + NTG I K LDYE Q Y
Sbjct: 1323 NADITYSITAINNHGTFSISPNTGSIFLVKKLDYETQSFY 1362
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDIPF 146
VN+ + DIND P F+ Y SV E G ++ ++ A+D DEG NA + Y + E PF
Sbjct: 221 VNVTIQDINDNPPVFEQDQYHSSVFEDAAVGSSILQITASDQDEGANAEIRYILDEGTPF 280
Query: 147 VVDANTGDIRTNKALDYEKQQLY 169
+D TG I ++LD+E ++ Y
Sbjct: 281 QIDPKTGTIVIKESLDFESKKEY 303
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 22/167 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + +G T+ +V TD+D+G + Y L TD+ F+++P T
Sbjct: 2751 SKIFSATVAENAPVGYTVTRVTTTDEDAGSNAISRYSL----TDSGLPFSINPNTGDITI 2806
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V I +TD+ND P F Y PE + G
Sbjct: 2807 NRPLNREETDHYIVKVSAHDSGWTVSTDVTIFITDVNDNVPRFTRPSYYLEYPELTEIGS 2866
Query: 119 AVGRVHATDADEGQNAVVYYSV-PEDIPFVVDANTGDIRTNKALDYE 164
V +V A D DEG N ++Y + + F ++A+TG++ + L Y+
Sbjct: 2867 LVTQVSAVDPDEGFNGKIFYFIRSQSEYFRINASTGEVFVKQQLKYQ 2913
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L A V + + DIND P+F Y+ S+ E + + RV A+D DE +N VV+Y +
Sbjct: 1166 LRDQAKVQVYIQDINDNPPKFTKDIYQASISESAPNMTQLLRVSASDVDESKNGVVHYHI 1225
Query: 141 P---EDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
E+ F +D+++G + LDYE YL ++
Sbjct: 1226 AEGNEEAQFTIDSSSGQVTLVGKLDYESSSSYLLKII 1262
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 73/159 (45%), Gaps = 20/159 (12%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA-------SYFNLDPATEHQ--------G 74
G + + A+D DS G V Y L +++ D FN+ A +++
Sbjct: 1836 GSIVEVILASDSDSELNGEVNYSLEEDDEDGTFLLNPVTGVFNVTRALDYETQRYYILTA 1895
Query: 75 PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQN 133
D GGL+ST V V DIND P F S Y SV E G ++ V A+D D+G N
Sbjct: 1896 KAHDGGGLASTVRVYFNVLDINDNPPVFSSSAYSTSVSESLPPGSSIVTVEASDGDDGAN 1955
Query: 134 AVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
A + Y + P FV+ G ++T KALD E Q Y
Sbjct: 1956 AQLLYKIASGDPQGHFVI-TKEGVLQTQKALDRESQSFY 1993
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 65/145 (44%), Gaps = 24/145 (16%)
Query: 14 SDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY-----------------RLLDN 56
S S F+ +A D G ++ V ++D D G G V Y LLD
Sbjct: 2344 SSSTFHTTIAEDA-PTGTDVLLVNSSDADVGINGAVRYIPVTFLINCSRRQIISSALLDR 2402
Query: 57 NTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ- 115
+ A+Y L AT+ P GLSS+ATV++ V DIND P F PY +P
Sbjct: 2403 E-ERANYQLLVVATDGGQP----KGLSSSATVSVTVADINDNPPRFHHHPYVTHIPASTA 2457
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV 140
G V V TD D G NA + YS+
Sbjct: 2458 AGALVFAVTVTDEDAGSNAQLQYSL 2482
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 74/171 (43%), Gaps = 24/171 (14%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------ 68
D L Y + + + +V+ATDKDSG G + Y + NT F + P
Sbjct: 973 DQLSYEVIILESEPVNSRFFKVEATDKDSGLNGEIMYDIAGGNT--GDMFGIFPDGQLYI 1030
Query: 69 ATEHQGPIQDEGG------------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
E +QD LS++ V + + D+ND P F S Y F E Q
Sbjct: 1031 KAELDREVQDRYNLVVVAKDRAVEPLSASVNVTVILDDVNDNRPLFNSTNYVFHFKEEQQ 1090
Query: 117 -GLAVGRVHATDADEGQNAVVYYS--VPEDIPFVVDANTGDIRTNKALDYE 164
G VG+V A D D G N+ + YS P+ F ++ TG++ + LD E
Sbjct: 1091 RGSLVGQVFAEDKDFGPNSEIRYSFETPQH-NFELNTITGELTSTLKLDRE 1140
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV-- 140
SS V I V D+ND P F P+ + E V V A D D+G N + Y++
Sbjct: 2627 SSYEKVEITVLDVNDNLPVFDKDPFNAEILENLPPQQVLLVSAVDLDKGSNGQLEYAIID 2686
Query: 141 -PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
+D F + TG+IRTN+ LD EK LY +V
Sbjct: 2687 GNKDNIFSIHRATGEIRTNRPLDREKVALYSLKV 2720
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 73/168 (43%), Gaps = 25/168 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA--SYFNLDPAT-----------EHQGP- 75
G L+ + A+D D G G + + D T A+ F LD + E Q
Sbjct: 574 GTELLVLSASDSDLGPNGTIRFSF-DAETPASLRELFRLDAVSGRLSTAVELDREDQASY 632
Query: 76 -----IQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
D G L S VNI + DIND P F + Y SV E + G V V A+D
Sbjct: 633 LLHIRAADAGSPPLHSVGRVNITLWDINDNRPVFYPVQYFASVKENEPPGSYVTTVLASD 692
Query: 128 ADEGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
D G+N V Y + + F + +NTG I T ALD E++ Y +V
Sbjct: 693 RDLGRNGTVKYVISSGDTTKFHIHSNTGKITTLVALDREEKTAYQLQV 740
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 68/157 (43%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ +ATD DSG VEY L + + +D G + D
Sbjct: 2048 VFTAQATDADSGPNSYVEYSLRGQHQNKFIIGTVDGDVRLIGELDREELSNYTVTVVATD 2107
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V D+ND P F Y+ V E G V +V A+DAD+G N
Sbjct: 2108 KGVPPLSSSMDVTMIVLDVNDNTPSFSQNIYDIEVEENILTGTDVIQVFASDADDGSNGQ 2167
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
+ +S+ + F +D+ TG I K LD E + Y
Sbjct: 2168 IRFSISSGNTNSDFRIDSVTGVISVAKRLDRETRSAY 2204
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPE--DI 144
V I + DIND P F + + ++ E DG + ++ A DADEG NA+V Y++ D
Sbjct: 1705 VEITLQDINDNPPVFANDVLDVTIEENIIDGFKIMQLTAKDADEGPNALVTYTIISGADD 1764
Query: 145 PFVVDANTGDIRTNKALDYEKQQLY 169
F +D +GD+ K LD E++ Y
Sbjct: 1765 SFRIDPESGDLIATKKLDRERRSKY 1789
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 85/189 (44%), Gaps = 32/189 (16%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATD-KDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQ 73
+SL Y ++G LM+V A D KD G +EY + N ++S F LD +
Sbjct: 2961 ESLSYFTPVTKSVKVGTRLMRVVAHDEKDFGLNSEIEYLITGGN--SSSKFVLDKTS--- 3015
Query: 74 GPI--------------------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
G I +D+G LS+ V I VT+ N PEF +V
Sbjct: 3016 GWITVFSSLVSEVNKIFLMNVTAKDKGNPPLSANTAVRIAVTEENHHTPEFSQSQISATV 3075
Query: 112 PEGQD-GLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQ 167
PE G A+ V A D D+ N ++ Y++ ++ F++++ TG + LD+E++Q
Sbjct: 3076 PESLAVGTAIRTVSAKDKDKEMNGLITYNITSGNDNGVFMLNSKTGVLSLANPLDFEEKQ 3135
Query: 168 LYLERVFLI 176
+ RV I
Sbjct: 3136 QHELRVSAI 3144
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 77/175 (44%), Gaps = 38/175 (21%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNT---------------------DAASYFNLDP 68
G + V ATD DSG+ + Y L+ N+ + AS L+
Sbjct: 469 GSYIKGVSATDGDSGQNANLRYSLVSGNSLGWFSISDNSGLVTSAALLDREVASEIVLNI 528
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV----PEGQDGLAVGRVH 124
+ + QG +Q + +S T + + +TD+ND+ P F Y S+ P G + L +
Sbjct: 529 SAKDQG-LQPK--ISYTKLI-VSITDVNDQVPTFTQSTYHVSLLEHAPAGTELLVLS--- 581
Query: 125 ATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLERV 173
A+D+D G N + +S + P F +DA +G + T LD E Q YL +
Sbjct: 582 ASDSDLGPNGTIRFSFDAETPASLRELFRLDAVSGRLSTAVELDREDQASYLLHI 636
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 64/136 (47%), Gaps = 22/136 (16%)
Query: 35 QVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTD 94
Q+ T +FG EY LL TD+ S PA LS T TV + V D
Sbjct: 2294 QLSVTKTLDREFG-AEYTLLITATDSGS-----PA------------LSGTGTVTVLVDD 2335
Query: 95 INDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTG 153
+ND P F S + ++ E G V V+++DAD G N V Y +P + F+++ +
Sbjct: 2336 VNDNVPVFSSSTFHTTIAEDAPTGTDVLLVNSSDADVGINGAVRY-IP--VTFLINCSRR 2392
Query: 154 DIRTNKALDYEKQQLY 169
I ++ LD E++ Y
Sbjct: 2393 QIISSALLDREERANY 2408
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLDPATEHQGPI 76
G ++QV A+D D G G + + + NT++ A + + + + +
Sbjct: 2149 GTDVIQVFASDADDGSNGQIRFSISSGNTNSDFRIDSVTGVISVAKRLDRETRSAYSLVV 2208
Query: 77 Q--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA--VGRVHATDADE 130
Q D G ATVNI + D+ND +P F+ PY +V E + L + +V A D D+
Sbjct: 2209 QAADRGSSPRVDHATVNIVLLDVNDCSPLFELSPYTINVQENLENLPKDILQVVARDDDQ 2268
Query: 131 GQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYE 164
G N+ + Y + E+ F + ++ G + K LD E
Sbjct: 2269 GANSQLSYMLSGGDEEGAFTL-SSAGQLSVTKTLDRE 2304
Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 62/155 (40%), Gaps = 35/155 (22%)
Query: 23 ARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL 82
A + G + Q KA+D D G G+V Y L +N F++ E G I G L
Sbjct: 878 AVENWSTGHIIFQAKASDPDEGLNGVVVYSLKEN---PKGLFHIH---EKHGLITLTGSL 931
Query: 83 ---------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAV 120
+S+ ++ I V D+ND +P F L YE + E +
Sbjct: 932 KASTNSYEVEVTASDMGVPQRTSSLSLIISVYDVNDNSPMFDQLSYEVIILESEPVNSRF 991
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDI 155
+V ATD D G N + Y + NTGD+
Sbjct: 992 FKVEATDKDSGLNGEIMYD-------IAGGNTGDM 1019
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 66/172 (38%), Gaps = 17/172 (9%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEY----------RLLDNNTDAASYFNLD- 67
Y A ++ G + V A+D+D G+ G V+Y + N + LD
Sbjct: 671 YFASVKENEPPGSYVTTVLASDRDLGRNGTVKYVISSGDTTKFHIHSNTGKITTLVALDR 730
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVG 121
A + Q D GGLSS A V + VTD D P F Y F + E G +G
Sbjct: 731 EEKTAYQLQVRATDGGGLSSHTHAFVTVTVTDTQDNPPVFSQENYSFVMFENVSPGTVIG 790
Query: 122 RVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V AT D N + + G I + +D E++ Y +V
Sbjct: 791 TVSATTVDLNSNISYLITSGDQRGLFAVNGAGQITASSLIDREEKGFYQLKV 842
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 80 GGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
G ++ A VNI V D+ND P F + + +V G + + A+D DEG N VV Y
Sbjct: 847 GEITGEAFVNITVRDLNDNAPRFLHAAEHVSAVENWSTGHIIFQAKASDPDEGLNGVVVY 906
Query: 139 SVPED 143
S+ E+
Sbjct: 907 SLKEN 911
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVP 141
SS A++ I V DIND P FQ Y + E G + V ATD D GQNA + YS+
Sbjct: 434 SSFASLVIFVNDINDHPPIFQEELYRVDISEDIPKGSYIKGVSATDGDSGQNANLRYSLV 493
Query: 142 EDIP---FVVDANTGDIRTNKALDYE 164
F + N+G + + LD E
Sbjct: 494 SGNSLGWFSISDNSGLVTSAALLDRE 519
Score = 39.7 bits (91), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G ++ V ATD DSG+ + Y + N F++ P T E Q
Sbjct: 1305 RIGDLVVSVTATDADSGQNADITYSITAINNHGT--FSISPNTGSIFLVKKLDYETQSFY 1362
Query: 75 ----PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D G SS+ V + V D ND P F S+PE +V + A D
Sbjct: 1363 KLNITAKDNGRPARSSSIPVVVYVRDFNDNPPVFAPGDIFKSIPENLPVSASVLTITAHD 1422
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + YS+ + +P F +D ++G I T+K +D E L+
Sbjct: 1423 TDADINGQLEYSIVQQVPRGNYFGIDPSSGLIYTSKEIDREFSNLF 1468
Score = 39.7 bits (91), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 67/171 (39%), Gaps = 23/171 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNN--------------------TDAASYFNLDPA 69
G +++ V+A+D D G + Y++ + ++ S++NL
Sbjct: 1939 GSSIVTVEASDGDDGANAQLLYKIASGDPQGHFVITKEGVLQTQKALDRESQSFYNLVIT 1998
Query: 70 TEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDAD 129
P +STA V+I + D+ND P F S + V ATDAD
Sbjct: 1999 VNDLAP-PPAARFTSTAQVSIILLDVNDCPPIFTSQKTTYIQENTPVDTVVFTAQATDAD 2057
Query: 130 EGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N+ V YS+ F++ GD+R LD E+ Y V K
Sbjct: 2058 SGPNSYVEYSLRGQHQNKFIIGTVDGDVRLIGELDREELSNYTVTVVATDK 2108
Score = 36.2 bits (82), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 72/178 (40%), Gaps = 36/178 (20%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----EHQGPIQDEGGL 82
E+G + QV A D D G G + Y + + YF ++ +T + Q Q+ G
Sbjct: 2863 EIGSLVTQVSAVDPDEGFNGKIFYFIRSQ----SEYFRINASTGEVFVKQQLKYQNSTGA 2918
Query: 83 SST----------------------ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
SS TV + + D ND P F+SL Y V + + G
Sbjct: 2919 SSLNINRHSFIVTASDRAVKPLISETTVILNIVDSNDNPPVFESLSYFTPVTKSVKVGTR 2978
Query: 120 VGRVHATD-ADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ RV A D D G N+ + Y + FV+D +G I +L E +++L V
Sbjct: 2979 LMRVVAHDEKDFGLNSEIEYLITGGNSSSKFVLDKTSGWITVFSSLVSEVNKIFLMNV 3036
>gi|410033344|ref|XP_003308299.2| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 2 [Pan troglodytes]
Length = 2887
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 84/181 (46%), Gaps = 26/181 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS-YFNLDPAT---EHQG 74
Y R+ E+G ++ V+ATD D+ + YRLL+ + + S F +DP + +G
Sbjct: 272 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRSGVIRTRG 331
Query: 75 PI------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D S+TA V + V D ND P+F Y V E
Sbjct: 332 PVDREEVESYQLTVEASDQGRDPSPRSTTAAVFLSVEDDNDNAPQFSEKRYVVQVREDVT 391
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLER 172
G V RV A+D D+G NA+V+YS+ F +DA TG + LDYE + Y R
Sbjct: 392 PGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLR 451
Query: 173 V 173
V
Sbjct: 452 V 452
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LD 67
Y R+ G +++V A+D+D G LV Y ++ N Y + LD
Sbjct: 382 YVVQVREDVTPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 441
Query: 68 PATEHQGPIQ---DEGG---LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
T + ++ +GG LS+ + V ++V DIND P F S P++ +V E G
Sbjct: 442 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 501
Query: 120 VGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V A DAD G NA + Y V D PF ++ TG I LD E+ Y
Sbjct: 502 VLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFY 554
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------------AASYFNLDPATEHQ-- 73
+G +++ V A D+D+ ++ Y++ NT + LD E Q
Sbjct: 603 VGTSVVTVSAVDRDA--HSVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYV 660
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G TA + + VTD N P FQS Y +V E + G V + ATD D G
Sbjct: 661 LAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 720
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + IP F +DA+TG + T LDYE Q Y
Sbjct: 721 ENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSY 759
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 33/181 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPATE---- 71
Y A + G + ++A D D G+ G +EY L D+ ++ +F+LDP T
Sbjct: 164 YQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSN--QFFSLDPVTGAVTT 221
Query: 72 -------------HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ QD G S+ AT+ I VTD ND +P F+ Y+ S+ E +
Sbjct: 222 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 281
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV-------PEDIPFVVDANTGDIRTNKALDYEKQQL 168
G V V ATD D NA + Y + P ++ F +D +G IRT +D E+ +
Sbjct: 282 VGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEV-FEIDPRSGVIRTRGPVDREEVES 340
Query: 169 Y 169
Y
Sbjct: 341 Y 341
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSSTA 86
G T++ + ATD+D+G+ + Y + D+ F +D A Q + E +S T
Sbjct: 706 GTTVVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTL 761
Query: 87 TVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
+ R V D+ND P+F Y+ SV E +V ++ ATD D
Sbjct: 762 AITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRD 821
Query: 130 EGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N V+Y+ D F+V++ +G +RT + LD E Y+ R + + K
Sbjct: 822 SGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYAVDK 874
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLDPATEHQGPIQD- 78
+++Q+ ATD+DSG G V Y + + LD Q ++
Sbjct: 811 SVLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAY 870
Query: 79 --EGGLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
+ G+ T V + V D+ND P F+ ++ V GLAV RV ATD DEG
Sbjct: 871 AVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEHNSPIGLAVARVTATDPDEGT 930
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 931 NAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYEDRPEYV 971
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 32/163 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G+ + +V ATD D G + Y++++ N F LD + + D
Sbjct: 914 IGLAVARVTATDPDEGTNAQIMYQIVEGNI--PEVFQLDIFSGELTALVDLDYEDRPEYV 971
Query: 79 ------EGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRV 123
L S ATV++R+ D ND P + F S P G A+GRV
Sbjct: 972 LVIQATSAPLVSRATVHVRLLDRNDNPPVLGNFEILFNNYVTNRSSSFPGG----AIGRV 1027
Query: 124 HATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
A D D + + ++ V ++A+TG+++ ++ALD +
Sbjct: 1028 PAHDPDISDSLTYSFERGNELSLVLLNASTGELKLSRALDNNR 1070
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 32/136 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASY-------------FN 65
LG ++ V+A D D+G +EYRL ++N T S F
Sbjct: 498 LGYLVLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFYSFG 557
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
++ A +H P L+++A+V++ V D+ND NP F Y + E G +V V
Sbjct: 558 VE-ARDHGTP-----ALTASASVSVTVLDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVS 611
Query: 125 ATDADEGQNAVVYYSV 140
A D D ++V+ Y +
Sbjct: 612 AVDRDA--HSVITYQI 625
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 100 PEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV------PEDIPFVVDANT 152
P+FQ Y+ +VPE Q G V + A D DEG+ + Y++ + F +D T
Sbjct: 157 PQFQPPRYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPVT 216
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G + T + LD E + ++ RV
Sbjct: 217 GAVTTAEELDRETKSTHVFRV 237
>gi|410973091|ref|XP_003992989.1| PREDICTED: protocadherin-16 [Felis catus]
Length = 3298
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 81/162 (50%), Gaps = 28/162 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGP- 75
G +++V A D D G G V Y L +F++DP + E Q
Sbjct: 488 GSFVVRVTARDPDQGTNGQVTYSLAPGAH--TRWFSIDPTSGIITTAASLDYELEPQPQL 545
Query: 76 --IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ +GGL +S+ATV++ + D+ND P+FQ Y S+PEG Q G +V ATDAD
Sbjct: 546 IVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDAD 605
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEK 165
G ++ YS+ + PF +DA +GD+ T + LD ++
Sbjct: 606 SGPFGLLSYSLGAGLGASGSPPFRIDAQSGDVCTTRILDRDQ 647
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 81/178 (45%), Gaps = 30/178 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + R+ G +L+ ++ATD D G G V Y + + F+LDP T
Sbjct: 1653 YSVLLRENSPPGTSLLTLRATDPDLGANGQVTYGGISGES-----FSLDPETGVLTTLRA 1707
Query: 71 ---EHQGPI------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
E Q I +D G L + TV + V D ND P F S+ VPEGQD
Sbjct: 1708 LDREEQEEINLTVYARDRGSPPLLTHVTVRVAVEDENDHAPTFGSVHLSLEVPEGQDPQT 1767
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQ---QLYLE 171
+ + A+D D G N + Y + + P F++D +G+ T + LD E + QL +E
Sbjct: 1768 LTVLRASDPDVGANGQLQYRILDGDPSGAFILDLASGEFGTMRPLDREVEPAFQLQIE 1825
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 22/161 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT--DAASYFNLDPAT--- 70
SL ++A ++ G + + A D D+G FG + Y LL+ + F L+ +T
Sbjct: 2708 SLLSTSLAENQPP-GTLVTTLHAIDGDAGAFGRLRYSLLEAGPGPEGREAFALNSSTGEL 2766
Query: 71 --------EHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
EH G Q D G LS++ TV++ VT ++ +P F + + F VPEG +
Sbjct: 2767 RARVAFDYEHTGSFQLLVGAADAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQVPEGAR 2826
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDI 155
G ++G V ATD D G + +V YS+ P F ++ TG +
Sbjct: 2827 RGYSLGHVQATDEDGGADGLVLYSLATSSPYFGINQTTGAL 2867
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 75/162 (46%), Gaps = 28/162 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA---------------TEHQ 73
+GV L+ V+A+D D G GLV + L ++ D + F LD + + HQ
Sbjct: 2616 IGVELLHVEASDADPGPHGLVRFTL--SSGDPSGLFELDESSGALRLAHPLDCETQSRHQ 2673
Query: 74 GPIQ--DEGGLS-STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
+Q D G + A V I V D+ND P F S+ E Q G V +HA D D
Sbjct: 2674 LVVQAADPAGTHFALAPVTIEVQDVNDHGPVFPLSLLSTSLAENQPPGTLVTTLHAIDGD 2733
Query: 130 EGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYE 164
G + YS+ E P F ++++TG++R A DYE
Sbjct: 2734 AGAFGRLRYSLLEAGPGPEGREAFALNSSTGELRARVAFDYE 2775
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL---------------DPATEHQGPI 76
TL ++A+D D G G ++YR+LD + A +L +PA + Q
Sbjct: 1767 TLTVLRASDPDVGANGQLQYRILDGDPSGAFILDLASGEFGTMRPLDREVEPAFQLQIEA 1826
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQN 133
+D G LS+T V + V D ND P F Y VPE G + ++ A D D G N
Sbjct: 1827 RDGGQPALSATLLVTVTVLDANDHAPAFPVPAYSVEVPEDAPAGTLLLQLQAHDPDAGAN 1886
Query: 134 AVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSYL 184
V Y + F+++ ++G++RT LD E+ Y V + A L
Sbjct: 1887 GRVTYYLGTGAAGAFLLEPSSGELRTATVLDREQCPSYAFSVSAVDGAAAGPL 1939
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 71/159 (44%), Gaps = 23/159 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-NTDAASYFNLDPAT------ 70
FY A + + G +QV ATD DSG FGL+ Y L + F +D +
Sbjct: 581 FYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGASGSPPFRIDAQSGDVCTT 640
Query: 71 ----EHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDG 117
QGP D GGL S V + V+D ND P+F Y S+ + G
Sbjct: 641 RILDRDQGPSSFDFTVTAVDGGGLKSMVYVKVFVSDENDNPPQFYPREYAASLSAQSTPG 700
Query: 118 LAVGRVHATDADEGQNA-VVYYSVPEDIP--FVVDANTG 153
AV RV A D D+G + + YY + + P F +D ++G
Sbjct: 701 TAVLRVRAHDPDQGPHGRLSYYILAGNNPPLFALDEHSG 739
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 68/158 (43%), Gaps = 30/158 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPI--- 76
G L+Q++A D D+G G V Y L T AA F L+P++ Q P
Sbjct: 1870 GTLLLQLQAHDPDAGANGRVTYYL---GTGAAGAFLLEPSSGELRTATVLDREQCPSYAF 1926
Query: 77 -------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-----VGRVH 124
G LS+T V I V D+ND P F + P +P L+ + +
Sbjct: 1927 SVSAVDGAAAGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGPSLSTPTLPLATLR 1986
Query: 125 ATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKA 160
A D D G NA + Y + P VD+ TG+IR ++
Sbjct: 1987 AEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARS 2024
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A +++ + DIND P F Y V E G V +V+A+DAD G N V Y +
Sbjct: 238 ALLDVTLLDINDHAPAFNQSRYHAVVSESLAPGSPVLQVYASDADAGANGAVTYEINRRQ 297
Query: 143 ---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D PF +DA+TG +R + LD+E+++++
Sbjct: 298 SEGDGPFSIDAHTGLLRLERPLDFEQRRVH 327
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY 138
G + TATV + + + ND +P P +V E Q G +VGRV ATD D G N + Y
Sbjct: 1082 GQQTGTATVRVSILNQNDHSPRLSEEPTFLAVAENQPPGTSVGRVFATDRDSGPNGRLTY 1141
Query: 139 SVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
S+ + F + TG++ T + LD E+Q Y
Sbjct: 1142 SLRQLSEDSKAFRIHPQTGEMTTLQTLDRERQSSY 1176
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 71/160 (44%), Gaps = 27/160 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYF-NLDP----------- 68
G + V A D D G+ V YRL L ++T A S +LD
Sbjct: 1560 GPAALHVVARDPDLGEAARVSYRLAAGGDGYFRLHSSTGALSVVRSLDREQRAEHVLTVV 1619
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
A++H P + S+T + + V D+ND+ P FQ Y + E G ++ + ATD
Sbjct: 1620 ASDHGSPPR-----SATQLLTVSVADVNDEAPAFQQQEYSVLLRENSPPGTSLLTLRATD 1674
Query: 128 ADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQ 167
D G N V Y F +D TG + T +ALD E+Q+
Sbjct: 1675 PDLGANGQVTYGGISGESFSLDPETGVLTTLRALDREEQE 1714
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 76/179 (42%), Gaps = 32/179 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG---- 74
Y A + G +++V+A D D G G + Y +L N F LD EH G
Sbjct: 689 YAASLSAQSTPGTAVLRVRAHDPDQGPHGRLSYYILAGNN--PPLFALD---EHSGLLTV 743
Query: 75 --PI--------------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ QD GGL + +A VNI + P F+ L Y FSVPE
Sbjct: 744 AWPLARRANAMVQLEIGAQDGGGLQAEPSARVNISIVPGTPVPPVFEQLQYVFSVPEDVA 803
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
G +VG V A + G+ V ++ P F +D +G ++T + LD E LE
Sbjct: 804 PGTSVGVVQARNP-PGRLGSVTLALSGGDPRGLFSLDGASGLLQTLRPLDRELLGPVLE 861
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
SS V + V D+ND P F Y +VPE G+ + V A+DAD G + +V +++
Sbjct: 2582 SSAVPVTVTVLDVNDNPPVFTQASYRMAVPEDTPIGVELLHVEASDADPGPHGLVRFTLS 2641
Query: 142 EDIP---FVVDANTGDIRTNKALDYEKQQLY 169
P F +D ++G +R LD E Q +
Sbjct: 2642 SGDPSGLFELDESSGALRLAHPLDCETQSRH 2672
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 77/172 (44%), Gaps = 35/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G ++ +V ATD+DSG G + Y L + D+ + F + P T E Q
Sbjct: 1120 GTSVGRVFATDRDSGPNGRLTYSLRQLSEDSKA-FRIHPQTGEMTTLQTLDRERQSSYQL 1178
Query: 76 ---IQDEGG--LSSTATVNIRVTDINDKNPEF--------QSLPYEF--SVPEGQDGLAV 120
+QD G S+T TV+I V D+ND +P F LP + VP G V
Sbjct: 1179 LVQVQDGGNPPRSTTGTVHIAVLDLNDNSPTFLQASGAAGGGLPIQVPDRVPPGT---LV 1235
Query: 121 GRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ A D DEG+N + Y++ P F + + G++ T L ++ Y+
Sbjct: 1236 TTLQAKDPDEGENGTILYTLTGPGSELFSLHPHLGELLTAAPLIRAERPHYV 1287
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 28/135 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------------ATEHQGP-- 75
G ++ V ATD+DSG G + Y L A F++DP A H+GP
Sbjct: 2391 GSAILSVSATDQDSGANGHISYHL----ASPAEGFSVDPNNGTLFTTVGTMALGHEGPGV 2446
Query: 76 ------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHAT 126
+D G G ++ ATV++++ D ND P F Y +V E G + + AT
Sbjct: 2447 VDVVLEARDHGMPGRAARATVHVQLQDQNDHTPSFTLPHYRVAVTEDLPPGSTLLTLEAT 2506
Query: 127 DADEGQ-NAVVYYSV 140
DAD + +A V YS+
Sbjct: 2507 DADGSRAHATVDYSI 2521
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 69/173 (39%), Gaps = 31/173 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH----------QGPI--- 76
G + ++A D D+G G V + LL A F +DP T H GP
Sbjct: 909 GTPIYTLRALDPDAGVNGRVTFTLLAGGGGA---FTVDPTTGHVRLMRPLGPPGGPAHEL 965
Query: 77 ----QDEGGLSSTATVNIRV----TDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
+D G T+ +RV + P F S Y +P G G V +V A
Sbjct: 966 ELEARDGGSPPRTSHFRLRVVVQDSATRGLAPHFDSPIYRVDLPSGTTPGTQVLQVQAQA 1025
Query: 128 ADEGQNAVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D G + Y + D PF ++ +G + ALD E Q+LY +V +S
Sbjct: 1026 PDGGP---ITYHLAADGPSSPFGLEPQSGWLWVRAALDREAQELYTLKVMAVS 1075
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 71/180 (39%), Gaps = 39/180 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + L L+QV+A D D G G + Y L + A F++DP
Sbjct: 2175 YVAFLPESRPLEGPLLQVEADDLDQGPSGQISYSLAASQP-ARGLFHVDPATGTITTTAI 2233
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
AT+ P L +AT+ + V D ND P P+E V E
Sbjct: 2234 LDREIWAETRLVLMATDRGSP-----ALVGSATLTVMVIDTNDNRPTIPQ-PWELRVSED 2287
Query: 115 Q-DGLAVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + +V D D G V++Y S P+D PF + G + LD+E++ Y
Sbjct: 2288 TLLGSEIAQVTGNDVDSG--PVLWYVLSPSGPQD-PFSIGRYGGRLSLTGPLDFEQRDRY 2344
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 82 LSSTATVNIRVTDINDKNPEF-------QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
L + AT + VTD+ND P F + LP E ++P G V RV A D D+G N
Sbjct: 451 LRAEATFVLHVTDVNDNAPTFDRQLYRPEPLP-EVALP----GSFVVRVTARDPDQGTNG 505
Query: 135 VVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
V YS+ F +D +G I T +LDYE
Sbjct: 506 QVTYSLAPGAHTRWFSIDPTSGIITTAASLDYE 538
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD-EGQNAVVYYSVPEDIP 145
V +RV D N+ P F P ++PE D G A+ A+DAD G N+ V Y + P
Sbjct: 1421 VQVRVQDENEHAPAFARDPLALALPENPDPGAALYTFRASDADGPGPNSDVRYRLLRQEP 1480
Query: 146 FV----VDANTGDIRTNKALDYEKQQLYL 170
V +DA TG + + LD E L
Sbjct: 1481 PVPALRLDARTGALSAPRGLDRETTPALL 1509
>gi|449269882|gb|EMC80622.1| Protocadherin Fat 1 [Columba livia]
Length = 4590
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 79/149 (53%), Gaps = 29/149 (19%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI------ 76
+ QVKATD+DSG +G + Y ++++ Y N LD T+ + I
Sbjct: 2512 VTQVKATDEDSGTYGHITYHIVNDFAKDRFYTNERGQIFTSEKLDRETQAEKVIAISLMA 2571
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD---GLAVGRVHATDADEGQN 133
+D GG + T+N+ +TD ND P+F++ YE ++ G D G +V +V A+DADEG N
Sbjct: 2572 KDSGGKVAFCTINVILTDDNDNAPQFRATEYEVNI--GSDVPRGTSVIKVWASDADEGTN 2629
Query: 134 AVVYYSVPEDIPFVVDANTGDIRTNKALD 162
A DI + ++A + +++ N +D
Sbjct: 2630 A--------DITYAIEAESENVKENLEID 2650
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 70/160 (43%), Gaps = 23/160 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG---- 74
G +MQV ATD D + Y L + A F L P T E Q
Sbjct: 3040 GKLIMQVSATDADIRSNAEITYTL---HGTGAEKFRLTPDTGELKTSMPLDREQQAVYYL 3096
Query: 75 --PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D GG A + + + D+ND PEF + PY +V E + + RV ATDAD G
Sbjct: 3097 LVKATDGGGRFCQANIILTLEDVNDNAPEFTADPYSITVFENTEPKTLLTRVQATDADAG 3156
Query: 132 QNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
N ++YS+ F +D +G IR K LD E Q +Y
Sbjct: 3157 MNRKIHYSLVNSAEGQFSIDEFSGIIRLEKPLDRELQAVY 3196
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 86/183 (46%), Gaps = 24/183 (13%)
Query: 8 SALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY---- 63
+A E DS F + E ++Q++ATDKD G G V+Y LL +TD +
Sbjct: 819 NAPEFLQDSYF--VELNENKEPNSEIIQIEATDKDLGANGEVKYSLL-TDTDKFTINAVT 875
Query: 64 ------FNLDPATEHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEF 109
LD +H ++ +E L ST + + V D+ND P+F Y
Sbjct: 876 GVVKVVGVLDREEQHVHFLKIEARDQPTEEPQLFSTVILKVSVEDVNDNPPKFIPSNYHV 935
Query: 110 SVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQ 166
+ E +G + + A D D GQ++ V YS+ + D F VD +G IR + LDYEK+
Sbjct: 936 KIREDLPEGTIIMWLEAYDPDLGQSSQVRYSLLDSGDSTFDVDKLSGAIRIVQRLDYEKK 995
Query: 167 QLY 169
Q Y
Sbjct: 996 QFY 998
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 77/174 (44%), Gaps = 25/174 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN---------TDAASYF--NLD 67
Y A + +G ++Q+ A +D + Y ++ N T A + +LD
Sbjct: 3236 YSASVSEDVLVGTEVLQIYAASRDIEANAEITYSIVSGNEHGKFSIDSTTGAIFIIESLD 3295
Query: 68 PATEHQGPIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--- 118
+ H+ + E GG LS TVNI VTDIND P F Y + E D +
Sbjct: 3296 YESSHEYYLTVEATDGGTPSLSDVVTVNINVTDINDNTPVFSQDTYTAVISE--DAILEQ 3353
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V V A DAD N ++Y++ + PF +D G+I+ K LD EK Y
Sbjct: 3354 SVITVMADDADGPSNNCIHYTIIDGNQGNPFTIDPTRGEIKVTKLLDREKISGY 3407
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 61 ASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
AS+F L+ T + ++A V I+V +N PEF Y+ S E G +
Sbjct: 432 ASHFELEVVTSDR---------RASAKVLIKVLGMNSNPPEFTQTSYKASFDENVPIGTS 482
Query: 120 VGRVHATDADEGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYE 164
V RV A D DEG+N V YS+ +PFV++ +G I T++ LDYE
Sbjct: 483 VMRVSARDPDEGENGYVTYSIANLNPLPFVINHFSGIISTSEDLDYE 529
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 85/189 (44%), Gaps = 35/189 (18%)
Query: 8 SALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD 67
+A E T+D Y + E L +V+ATD D+G + Y L+++ A F++D
Sbjct: 3122 NAPEFTADP--YSITVFENTEPKTLLTRVQATDADAGMNRKIHYSLVNS---AEGQFSID 3176
Query: 68 PATEHQGPIQ--------------------DEG---GLSSTATVNIRVTDINDKNPEFQS 104
E G I+ DEG LSST+++ + V DIND P F+
Sbjct: 3177 ---EFSGIIRLEKPLDRELQAVYTLTLKATDEGLPRRLSSTSSLIVSVLDINDNPPVFEH 3233
Query: 105 LPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKA 160
Y SV E G V +++A D NA + YS+ E F +D+ TG I ++
Sbjct: 3234 REYSASVSEDVLVGTEVLQIYAASRDIEANAEITYSIVSGNEHGKFSIDSTTGAIFIIES 3293
Query: 161 LDYEKQQLY 169
LDYE Y
Sbjct: 3294 LDYESSHEY 3302
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 23/160 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV ATD DSG + Y L+++N+++ YF++D +T
Sbjct: 2289 YTATLSEASVIGTSVVQVSATDADSGTNRGISYHLVEDNSESHDYFHIDSSTGLILTART 2348
Query: 71 -------EHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
+H+ ++ +GG LSS V + VTD+ND P F L YE + E G
Sbjct: 2349 LDYEQIKQHKLLVRAIDGGMLPLSSDTVVTVDVTDLNDNPPLFNQLLYEAKISELAPRGH 2408
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
V V A+DAD + YS+ + FV+++ TG I
Sbjct: 2409 FVTCVQASDADSSDVDKLEYSILTGNDQKNFVINSKTGII 2448
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAVVYYSV-- 140
S+ V+I+V D+ND P +S PYE F V G V +V TD D G N V YS+
Sbjct: 2792 SSVEVSIQVKDVNDNQPVLESNPYEAFIVENMPAGTRVIQVKGTDLDSGLNGQVTYSLDP 2851
Query: 141 PEDI----PFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
+++ F ++ TG I T K LD+EK+ Y R+ +I+
Sbjct: 2852 SQELDTIESFTINMETGWITTLKELDHEKRDKY--RITVIA 2890
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 73/162 (45%), Gaps = 28/162 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASY--FNLDPAT---------------EHQGP 75
++QV ATD+D K L+ + +TD S F LDP T +H
Sbjct: 1476 ILQVSATDRDE-KNKLI--YTMQGSTDPISLKKFRLDPGTGSLYTSEKLDHETMNQHILT 1532
Query: 76 I----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
+ QD + A + I V+D ND P F S YE V E G AV +V A D D+
Sbjct: 1533 VMVRDQDVPVKRNYARIIISVSDTNDHAPWFTSSSYEGRVYESAAVGSAVLQVTALDKDK 1592
Query: 131 GQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
G+NA + YS+ F +D G I+ K LD KQ+ Y
Sbjct: 1593 GKNAEIVYSIESGNIGNSFFIDPVLGMIKIAKELDRSKQEEY 1634
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G + V+I V DIND P F Y ++ E G +V +V ATDAD G N + Y
Sbjct: 2263 GAHADVFVDIIVEDINDNPPVFTEQSYTATLSEASVIGTSVVQVSATDADSGTNRGISYH 2322
Query: 140 VPEDIP-----FVVDANTGDIRTNKALDYE--KQQLYLERVF 174
+ ED F +D++TG I T + LDYE KQ L R
Sbjct: 2323 LVEDNSESHDYFHIDSSTGLILTARTLDYEQIKQHKLLVRAI 2364
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 11/101 (10%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR--------VHATDADEG 131
GLS+ ATV + + D ND P F Y + E +V + ATDAD+
Sbjct: 1744 AGLSTNATVVVHLRDENDNTPIFMQAEYTGLISESASINSVVLTDKNIPLVIRATDADKE 1803
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
NA++ Y + E F +D++TG IRT +LDYE+ ++
Sbjct: 1804 SNALLVYQIVEPSVRKYFAIDSSTGAIRTVTSLDYEETNIF 1844
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVY 137
+G ++ A V ++V D ND +P + Y SVPE G + +V ATDAD NA +
Sbjct: 3001 DGTFATRAVVEVKVLDANDNSPVCEKALYTDSVPEDALPGKLIMQVSATDADIRSNAEIT 3060
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ F + +TG+++T+ LD E+Q +Y
Sbjct: 3061 YTLHGTGAEKFRLTPDTGELKTSMPLDREQQAVY 3094
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE--DI 144
V I+V D ND P F Y S+PE ++ RV ATDAD G N YYS E D+
Sbjct: 136 VRIQVLDTNDLRPLFSPTSYSVSLPENTAVRTSIARVSATDADIGTNGEFYYSFKERTDV 195
Query: 145 PFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
F + +G + LDY + Y + + +
Sbjct: 196 -FAIHPTSGVVVLTGRLDYSDTKHYEMEILAVDR 228
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 36/168 (21%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------EHQGP--- 75
V+++Q++A D DS + Y++ N +F+++P T E QG
Sbjct: 1157 VSVIQIEAFDPDSSSSEKLTYKITSGNPQG--FFSINPKTGLITTTSRKLDREQQGEHIL 1214
Query: 76 ---IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG----QDGLA----VGR 122
+ D G S+ A V ++V D ND P+F Y+ +PE ++ A + R
Sbjct: 1215 EVMVTDNGIPPKSTIARVIVKVLDENDNKPQFLQKFYKIQLPERGKPERERTARREPIYR 1274
Query: 123 VHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNK---ALDYE 164
V A D DEG NA + YS+ E F ++ TG + + K A DY+
Sbjct: 1275 VIAADKDEGPNAEISYSIEDGDEHGKFFIEPKTGVVSSKKFSAAKDYD 1322
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 26/174 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
+L Y A+ + E+G + +V A DKD+G+ G V Y L ++ +F +DP E
Sbjct: 2084 NLPYYAVVKVDSEVGHVIRRVTAVDKDTGRNGEVHYYLKEHQ----EHFQIDPTGEISLK 2139
Query: 76 -----------------IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
+D G + +A V + +T ++ P F+ Y +PE L
Sbjct: 2140 KKFEPDTVNKEYLVTVVAKDGGDPAFSAEVVVPITVMSKAMPVFEKPFYSAEIPENIQ-L 2198
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
VH A+ + V+YS+ + P F ++ NTG + LD+E Y
Sbjct: 2199 HSPVVHV-QANSPEGLKVFYSITDGDPFSQFTINFNTGVVNVVAPLDFESHPAY 2251
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 74/180 (41%), Gaps = 28/180 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLDPAT------- 70
Y A + G ++QVK TD DSG G V Y L D F ++ T
Sbjct: 2815 YEAFIVENMPAGTRVIQVKGTDLDSGLNGQVTYSLDPSQELDTIESFTINMETGWITTLK 2874
Query: 71 --EHQGP-------IQDEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-D 116
+H+ I + G LSS A V + VTD+ND P F + Y+ +V E
Sbjct: 2875 ELDHEKRDKYRITVIASDRGEKIQLSSLAVVEVTVTDVNDNPPRFTAEIYKGTVSEDDPP 2934
Query: 117 GLAVGRVHATDAD--EGQNAVVYYSVPEDI--PFVVD--ANTGDIRTNKALDYEKQQLYL 170
G + + TDAD E V YY D F ++ N + K LD E++ YL
Sbjct: 2935 GGVIAILSTTDADTEEANRQVSYYITGGDPLGQFAIENIQNEWKVYVKKPLDREEKDNYL 2994
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 74/173 (42%), Gaps = 28/173 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------ATE 71
Y + +G ++QV A DKD GK + Y + N + F +DP A E
Sbjct: 1568 YEGRVYESAAVGSAVLQVTALDKDKGKNAEIVYSIESGNI--GNSFFIDPVLGMIKIAKE 1625
Query: 72 HQGPIQDEGGLSSTAT------------VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
Q+E L AT V+I VT ++ +P+F + Y + E G
Sbjct: 1626 LDRSKQEEYSLMVKATDKGDPPMSEVTSVHIFVTVSDNASPKFTAKEYSTEISESASIGS 1685
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
VG V A Q++VVY +I F ++ N+G I + K LD+E +Y
Sbjct: 1686 FVGMVTAY----SQSSVVYEIKDGNIGDAFAINPNSGVIVSQKILDFETLPVY 1734
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 31/183 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN--------------------NT 58
Y R+ G +M ++A D D G+ V Y LLD+ +
Sbjct: 933 YHVKIREDLPEGTIIMWLEAYDPDLGQSSQVRYSLLDSGDSTFDVDKLSGAIRIVQRLDY 992
Query: 59 DAASYFNLDPATEHQG-PIQDEGGLSSTATVNIRVTDINDK--NPEFQSLPYE-FSVPEG 114
+ ++NL + +G PI LS+T + + + D+N+ P F + F +
Sbjct: 993 EKKQFYNLTVRAKDKGKPI----SLSATCYIEVEIVDVNENLHPPRFSIFADKGFIKEDA 1048
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
G +V V A D DEG++ + YS+ + F +D G I T LD E Y
Sbjct: 1049 PVGSSVMTVSAYDEDEGRDGEIRYSIRDGSGIGVFRIDEEKGIIETADRLDRETTSHYWL 1108
Query: 172 RVF 174
V+
Sbjct: 1109 TVY 1111
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVY 137
+G + + V I+V D N+ P+F + YE +PE + +V ATD DE +N ++Y
Sbjct: 1434 DGTRTISTQVYIKVIDTNNHRPQFSASKYEVVIPEDTMPETEILQVSATDRDE-KNKLIY 1492
Query: 138 YSVPEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERVFL 175
P F +D TG + T++ LD+E ++ V +
Sbjct: 1493 TMQGSTDPISLKKFRLDPGTGSLYTSEKLDHETMNQHILTVMV 1535
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 74/192 (38%), Gaps = 38/192 (19%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------- 60
+ L Y A + G + V+A+D DS +EY +L N
Sbjct: 2392 NQLLYEAKISELAPRGHFVTCVQASDADSSDVDKLEYSILTGNDQKNFVINSKTGIITVS 2451
Query: 61 -------ASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
S++NL+ + +G S+A V+I VT N +P F YE + E
Sbjct: 2452 NLRRQALKSHYNLNVSVS-------DGVFRSSAQVHITVTSANMHSPVFSQNEYEVELAE 2504
Query: 114 GQDGLA-VGRVHATDADEGQNAVVYYSVPEDIPFVVDA----NTGDIRTNKALDYEKQQL 168
V +V ATD D G + Y + D F D G I T++ LD E Q
Sbjct: 2505 NAPMRTLVTQVKATDEDSGTYGHITYHIVND--FAKDRFYTNERGQIFTSEKLDRETQA- 2561
Query: 169 YLERVFLISKFA 180
E+V IS A
Sbjct: 2562 --EKVIAISLMA 2571
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 86/187 (45%), Gaps = 30/187 (16%)
Query: 6 IPSALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN 65
+PS++E+ R+ +G +++ + A D D+G G + Y + N D++ +
Sbjct: 721 LPSSIEV-----------REDQPVGSSIILMSAIDLDTGFNGKLVYVISGGNEDSSFIVD 769
Query: 66 LDPA-----TEHQGPIQDEGGLSSTA------------TVNIRVTDINDKNPEFQSLPYE 108
++ + ++D+ L+ T ++I++ D ND PEF Y
Sbjct: 770 MERGVLKILSPLDREVKDKYTLNITVYDLGVPQKSAWHLLDIKILDANDNAPEFLQDSYF 829
Query: 109 FSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQ 166
+ E ++ + ++ ATD D G N V YS+ D F ++A TG ++ LD E+Q
Sbjct: 830 VELNENKEPNSEIIQIEATDKDLGANGEVKYSLLTDTDKFTINAVTGVVKVVGVLDREEQ 889
Query: 167 QLYLERV 173
++ ++
Sbjct: 890 HVHFLKI 896
Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V + V D+ND P F +LPY V + + G + RV A D D G+N V+Y + E
Sbjct: 2068 VKVTVEDVNDNAPFFVNLPYYAVVKVDSEVGHVIRRVTAVDKDTGRNGEVHYYLKEHQEH 2127
Query: 146 FVVDANTGDIRTNKALD 162
F +D TG+I K +
Sbjct: 2128 FQIDP-TGEISLKKKFE 2143
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFS--VPEGQDGLAVGRVHATDADEGQNAVVYYSVPED 143
A V I V DIND P F YE S VP + G+ V V+ATDAD G + + YS+ E
Sbjct: 1864 ANVTIYVIDINDCPPVFSRELYETSILVPTYK-GVKVISVNATDADSGIFSQLIYSIIEG 1922
Query: 144 I---PFVVDANTGDI 155
F ++ TGDI
Sbjct: 1923 NIGEKFSINPKTGDI 1937
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 32/174 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ----------- 77
+G ++M V A D+D G+ G + Y + D + F +D E +G I+
Sbjct: 1050 VGSSVMTVSAYDEDEGRDGEIRYSIRDGS--GIGVFRID---EEKGIIETADRLDRETTS 1104
Query: 78 ---------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHA 125
D+G LSS + I V D+ND P+ Y V E ++V ++ A
Sbjct: 1105 HYWLTVYATDQGVVPLSSFIEIYIEVGDVNDNAPQTTEPVYYPEVMENSPKDVSVIQIEA 1164
Query: 126 TDADEGQNAVVYYSVPEDIP---FVVDANTGDI-RTNKALDYEKQQLYLERVFL 175
D D + + Y + P F ++ TG I T++ LD E+Q ++ V +
Sbjct: 1165 FDPDSSSSEKLTYKITSGNPQGFFSINPKTGLITTTSRKLDREQQGEHILEVMV 1218
>gi|358341759|dbj|GAA49354.1| protocadherin-11 X-linked [Clonorchis sinensis]
Length = 1510
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 78/163 (47%), Gaps = 30/163 (18%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ-------------------- 77
A D D+G V Y+L++N +A + F +DP T G I
Sbjct: 648 AVDSDTGANADVFYQLIENGMNATT-FKIDPKT---GTITTTVSFDREAVDHYTLYALAI 703
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNA 134
D G L+ST+TV I V D+ND P+F S+ Y F + E Q VG+V ATD D
Sbjct: 704 DHGIPPLTSTSTVKITVLDVNDNAPQFGSVEYTFHLAENQPRATQVGQVTATDLDSDIYG 763
Query: 135 VVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
++Y V ++ F +D TG IR +ALD EKQ Y+ V
Sbjct: 764 PIHYFVGDESDATNFRIDKMTGVIRCRQALDREKQARYVFTVL 806
>gi|426216136|ref|XP_004002323.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 2, partial [Ovis aries]
Length = 2841
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 84/177 (47%), Gaps = 22/177 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS-YFNLDPAT---EHQG 74
Y R+ E+G ++ V+ATD D+ + YRL++ + + S F +DP + +G
Sbjct: 291 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLVEGSGGSPSEVFEIDPRSGVIRTRG 350
Query: 75 PIQDE--------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
P+ E G ++TA + + V D ND P+F Y V E G
Sbjct: 351 PVDREEVESYQLTVEASXPGPRTATAAIFLSVEDDNDNAPQFSEKRYVVQVREDVAPGAP 410
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
V RV A+D D+G NA+V+YS+ F +DA TG + LDYE + Y RV
Sbjct: 411 VLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLRV 467
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LD 67
Y R+ G +++V A+D+D G LV Y ++ N Y + LD
Sbjct: 397 YVVQVREDVAPGAPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 456
Query: 68 PATEHQGPIQ---DEGG---LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
T + ++ +GG LS+ + V ++V DIND P F S P++ +V E G
Sbjct: 457 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 516
Query: 120 VGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V A DAD G NA + Y V D PF ++ TG I LD E+ Y
Sbjct: 517 VLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFY 569
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------------AASYFNLDPATEHQ-- 73
+G +++ V A D+D+ ++ Y++ NT + LD E Q
Sbjct: 618 VGTSVVTVSAVDRDA--HSVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYV 675
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G TA V + VTD N P FQS Y ++ E + G V + ATD D G
Sbjct: 676 LAVTASDGTRQDTAQVVVNVTDANTHRPVFQSSHYTVNINEDRPAGTTVVLISATDEDTG 735
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + IP F +DA+TG + T LDYE Q Y
Sbjct: 736 ENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSY 774
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 33/181 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPATE---- 71
Y A + G + ++A D D G+ G +EY L D+ ++ +F+LDP T
Sbjct: 183 YQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSN--HFFSLDPITGAVTT 240
Query: 72 -------------HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ QD G S+ AT+ I VTD ND +P F+ Y+ S+ E +
Sbjct: 241 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 300
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV-------PEDIPFVVDANTGDIRTNKALDYEKQQL 168
G V V ATD D NA + Y + P ++ F +D +G IRT +D E+ +
Sbjct: 301 VGYEVLTVRATDGDAPPNANILYRLVEGSGGSPSEV-FEIDPRSGVIRTRGPVDREEVES 359
Query: 169 Y 169
Y
Sbjct: 360 Y 360
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLDPATEHQGPIQ-- 77
+++Q+ ATD+DSG G V Y N + LD Q ++
Sbjct: 826 SVLQISATDRDSGLNGRVFYTFQGGNDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAY 885
Query: 78 --DEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G + +++ VT D+ND P F+ ++ V E GLAV RV ATD DEG
Sbjct: 886 AVDKGMPPARTPMDVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGT 945
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 946 NAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYEDRPEYV 986
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSSTA 86
G T++ + ATD+D+G+ + Y + D+ F +D A Q + E +S T
Sbjct: 721 GTTVVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTL 776
Query: 87 TVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
+ R V D+ND P+F Y+ SV E +V ++ ATD D
Sbjct: 777 AITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRD 836
Query: 130 EGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N V+Y+ D F+V++ +G +RT + LD E Y+ R + + K
Sbjct: 837 SGLNGRVFYTFQGGNDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYAVDK 889
Score = 42.7 bits (99), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 32/163 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G+ + +V ATD D G + Y++++ N F LD + + D
Sbjct: 929 IGLAVARVTATDPDEGTNAQIMYQIVEGNI--PEVFQLDIFSGELTALVDLDYEDRPEYV 986
Query: 79 ------EGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRV 123
L S ATV++R+ D ND P + F S P G A+GRV
Sbjct: 987 LVIQATSAPLVSRATVHVRLLDRNDNPPVLGNFEILFNNYVTNRSSSFPGG----AIGRV 1042
Query: 124 HATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
A D D + + ++ V ++A+TG++R ++ALD +
Sbjct: 1043 PAHDPDISDSLTYSFERGNELSLVLLNASTGELRLSRALDNNR 1085
Score = 39.3 bits (90), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 32/136 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASY-------------FN 65
LG ++ V+A D D+G +EYRL ++N T S F
Sbjct: 513 LGYLVLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFYSFG 572
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
++ A +H P L+++A+V++ + D+ND NP F Y + E G +V V
Sbjct: 573 VE-ARDHGTP-----ALTASASVSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVS 626
Query: 125 ATDADEGQNAVVYYSV 140
A D D ++V+ Y +
Sbjct: 627 AVDRDA--HSVITYQI 640
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 100 PEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV------PEDIPFVVDANT 152
P+FQ Y+ +VPE Q G V + A D DEG+ + Y++ + F +D T
Sbjct: 176 PQFQPPSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNHFFSLDPIT 235
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G + T + LD E + ++ RV
Sbjct: 236 GAVTTAEELDRETKSTHVFRV 256
>gi|340379563|ref|XP_003388296.1| PREDICTED: protocadherin Fat 4 [Amphimedon queenslandica]
Length = 4052
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYS 139
GL S ATV + +TDIND+ P F Y ++PE G + V A D D NA V YS
Sbjct: 2320 GLYSQATVQVSITDINDQVPSFTQSSYIINIPETISKGSTILTVEAADGDTPPNAQVTYS 2379
Query: 140 VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ F +D +TGDI TN LDYE + Y
Sbjct: 2380 LSPSTSFTIDPSTGDITTNSTLDYEVRTSY 2409
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 72/156 (46%), Gaps = 19/156 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN---------LDPATEHQGPIQ------ 77
+++ ATD+D G ++ Y LL N + A N + P E ++
Sbjct: 3088 FIRLNATDEDFGNNSIITYTLLTNPSSANVSLNSSTGEVSFLISPDHETASRLEYYIRAS 3147
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG-LAVGRVHATDADEGQNAVV 136
D GGL AT+ I + D+ND P F Y S+ E + V V ATD+D G NA++
Sbjct: 3148 DIGGLEDLATLTINIIDVNDNTPLFTGSNYTASIYENTTANVEVLLVSATDSDSGSNALI 3207
Query: 137 YYSVPEDIP--FVVDANTGDIRTNKA-LDYEKQQLY 169
Y + + F +D TG IR +D E+ +L+
Sbjct: 3208 RYDIDLESSQYFTIDTVTGLIRARAHFIDRERNELF 3243
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 74/167 (44%), Gaps = 16/167 (9%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL------DNNT----DAASYFNLDP 68
Y A + GV L++V ATD D + Y ++ D T ++S + +
Sbjct: 2547 YSASVVENSPSGVGLIRVNATDSDRDINAEITYSMIGSLFTIDQKTGLISTSSSNIDRES 2606
Query: 69 ATEHQGPI--QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD--GLAVGRVH 124
H I +D GGL+ TATV I V D+ND +P F Y + EG D V V
Sbjct: 2607 TPTHSLIIIARDGGGLTDTATVVISVVDVNDNSPSFTQSLYGALLAEGDDYNNHQVLTVL 2666
Query: 125 ATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
A D DE N + Y++ F ++ +TG + +L+YE Y
Sbjct: 2667 ARDPDEEINGSITYNIITSHFNLFHINPSTGVVSVTGSLNYETDSSY 2713
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 23/174 (13%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD--------NNTDAASYFN--L 66
L Y D E+G + V A+D D+ + Y ++ N++ Y+N +
Sbjct: 2137 LPYAVYLSDTQEIGSHVFTVLASDADTDNNSDISYYIISDPISALGINSSTGVLYYNQTI 2196
Query: 67 DPATE--HQGPI---QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAV 120
DPA H + D G ++ +R+T IN P F + Y ++PE G V
Sbjct: 2197 DPAITDIHITVVIGAADNGHPQLSSNTTLRLTLINSNAPNFSAPLYTATLPEDTAAGTTV 2256
Query: 121 GRVHATDADEGQNAVVYYSVPE--DI--PFVVDANTGDIRTN-KALDYEKQQLY 169
R+ A +G A+++YS+ + DI PF ++ +G I N + LDYE Y
Sbjct: 2257 VRLLAEPRTDG--ALLFYSITDTGDIRFPFSINPESGVITVNDRGLDYETTPSY 2308
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDI 144
+V I + DIND +P F Y SV E G+ + RV+ATD+D NA + YS+ +
Sbjct: 2526 TSVTIDIDDINDHSPTFNQSEYSASVVENSPSGVGLIRVNATDSDRDINAEITYSMIGSL 2585
Query: 145 PFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
F +D TG I T+ + + +++ + +I++
Sbjct: 2586 -FTIDQKTGLISTSSS-NIDRESTPTHSLIIIAR 2617
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDADEGQNAVVYYSV-PE 142
+T+NI +TD+N+ P S Y S+ + V V A D D G N V Y +
Sbjct: 2839 STINITITDVNEW-PVITSALYISSIISEGSSINSTVTIVQAVDTDLGLNGTVQYRLGSS 2897
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
D PF VD +G + + LD E+QQLY V
Sbjct: 2898 DTPFSVDTVSGALLVSGTLDREQQQLYTLNVI 2929
Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDN-NTDAASYFNLDPA--TEHQGPIQDEGGLSST 85
L + + TD DS V Y ++D + + S FN+ + GP+ E S T
Sbjct: 1528 LNYVIGSINITDSDSVTASNVIYSIIDWLHPLSPSLFNITSSGVLVLTGPLDRETISSHT 1587
Query: 86 ATVNI---------RVT----DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
TV++ RVT D +D P F LP VPE + G V V A D D+
Sbjct: 1588 LTVSVQDGQFEQLTRVTINVEDTDDNPPSFTGLPVTLVVPEDRSLGDIVTIVTAFDLDDP 1647
Query: 132 QN-AVVYYSVPE-----DIPFVVDANTGDIRTNKALDYEKQQLY 169
N + + YS+ ++PF ++++TG I N +L+YE Y
Sbjct: 1648 LNSSSIVYSLSGSHQILNLPFQLESSTGVISINGSLNYESVTSY 1691
Score = 42.7 bits (99), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
L ++ +NI V D N+ P F Y F+ PE + G VG + A+D D + + Y
Sbjct: 3363 ALKTSVLINIHVLDQNEHLPTFNRPLYTFTKPEDEPSGSVVGTITASDLDPADSNLTYRF 3422
Query: 140 VPEDIPFVVDANTGDIRT-NKALDYEKQQLY 169
F V+ TG IR + LD+E+ + Y
Sbjct: 3423 KGSVSDFSVNERTGKIRIGGRGLDFERVRNY 3453
Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 76 IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVG-RVHATDADEGQNA 134
I ++G + A +++ +TDIND P F + Y + E L V R++ATD D G N+
Sbjct: 3043 IANDGVFTVEAFLSVIITDINDNRPFFSTGEYVVDIIENYSTLTVFIRLNATDEDFGNNS 3102
Query: 135 VVYYSV---PEDIPFVVDANTGDIRTNKALDYEK 165
++ Y++ P ++++TG++ + D+E
Sbjct: 3103 IITYTLLTNPSSANVSLNSSTGEVSFLISPDHET 3136
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNA-VVYYSVPED 143
TV + ++D+ND P F LPY + + Q+ G V V A+DAD N+ + YY + +
Sbjct: 2118 TTVTVTISDVNDNAPTFIGLPYAVYLSDTQEIGSHVFTVLASDADTDNNSDISYYIISDP 2177
Query: 144 IPFV-VDANTGDIRTNKALDYEKQQLYLERVF 174
I + ++++TG + N+ +D +++ V
Sbjct: 2178 ISALGINSSTGVLYYNQTIDPAITDIHITVVI 2209
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 58/147 (39%), Gaps = 31/147 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y A + V ++ V ATD DSG L+ Y D + +++ YF +D T G I+
Sbjct: 3177 YTASIYENTTANVEVLLVSATDSDSGSNALIRY---DIDLESSQYFTIDTVT---GLIRA 3230
Query: 78 -----------------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
+E L S+ V + +TDIND P F + V E
Sbjct: 3231 RAHFIDRERNELFNILVTARDSGEELSLHSSTNVTVFITDINDNPPLFADSSFTVFVYEN 3290
Query: 115 QD-GLAVGRVHATDADEGQNAVVYYSV 140
+ TD DEG NA + Y +
Sbjct: 3291 ASVDTVIHSFTVTDDDEGVNAQLSYDI 3317
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 28/133 (21%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQG 74
G T++ V+A D D+ V Y L ++ F +DP+T +Q
Sbjct: 2357 GSTILTVEAADGDTPPNAQVTYSL-----SPSTSFTIDPSTGDITTNSTLDYEVRTSYQL 2411
Query: 75 PI--QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
+ +D G L +A++ I VT++ND P F L SV EG D G V + A DAD
Sbjct: 2412 TLVARDSGDTPLEGSASLRIIVTNVNDNPPVFVPLS-PISVSEGADPGTVVTFIRAMDAD 2470
Query: 130 EGQNAVVYYSVPE 142
N ++Y +PE
Sbjct: 2471 --NNEIIYSIIPE 2481
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 26/170 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE---- 71
S FY +G ++ V ATD+D+G G + Y ++ + + F + P+T
Sbjct: 476 SPFYEGRVSSGSPIGTNVLFVTATDQDAGDNGTLVYAMV----NGSGSFTIHPSTGLVSV 531
Query: 72 HQG-----------PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPY-EFSVPE-GQD 116
H ++D G L ++ + VT+ +D +P S PY SV E
Sbjct: 532 HSSSLVPGLVFINVSVRDTGPSPLYDYTSLTVLVTE-SDTHPPVFSNPYPSTSVSEYWNQ 590
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYE 164
L + +A+D + G + V+YS+ P F +D +G + N +LDYE
Sbjct: 591 SLPLYHFNASDPNTGCSGSVHYSLLYSEPPLFYIDQVSGLLYLNDSLDYE 640
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 70/175 (40%), Gaps = 36/175 (20%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNT----DAASYFNLDPATEHQGPIQ---------D 78
T+ V+A D D G G V+YRL ++T D S L T + Q D
Sbjct: 2873 TVTIVQAVDTDLGLNGTVQYRLGSSDTPFSVDTVSGALLVSGTLDREQQQLYTLNVIAYD 2932
Query: 79 EG--GLSSTATVNIRVTDINDKNPEF------------QSLPYEFSVPE----GQDGLAV 120
G LSS+ATV I + DIND P F Y S+PE Q L +
Sbjct: 2933 LGTPSLSSSATVIIAIQDINDNPPSFICTNDTNGVLIDSQCHYSISIPEDVELNQLILTL 2992
Query: 121 GRVHATDAD-EGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
G D+D G + + S +I + N G IRT LD E Y RV
Sbjct: 2993 G---TNDSDITGSTSFLLNSTVFNITSTSEGN-GVIRTGAGLDRETNDHYELRVI 3043
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 58/126 (46%), Gaps = 14/126 (11%)
Query: 23 ARDKHE-LGVTLMQVKATDKDSGKFGL--VEYRLLDNNTDAASYFN----LDPATEHQGP 75
R H ++L+ V + ++G GL V LL + D Y + L AT++ P
Sbjct: 394 CRTCHNCFTLSLVNVTSNTSNTGNTGLTAVYNLLLTSRLDYEGYTDTHVILINATDNGAP 453
Query: 76 IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNA 134
L+ T+NI++TD ND P F S YE V G G V V ATD D G N
Sbjct: 454 -----PLTILRTINIQLTDTNDP-PLFPSPFYEGRVSSGSPIGTNVLFVTATDQDAGDNG 507
Query: 135 VVYYSV 140
+ Y++
Sbjct: 508 TLVYAM 513
Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 60/140 (42%), Gaps = 13/140 (9%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKN 99
D +GK L R LD TD SY + T+ D GG T T+N+ DIND
Sbjct: 842 DSVTGKVWLT--RPLDYETDPHSYTLVFDVTDLSSSPLDTGGQLLTVTLNLL--DINDHF 897
Query: 100 PEFQSLPYEFSVPE------GQDGLAVGRVHATDADEGQNAVVY-YSVPEDIPFVVDANT 152
P F Y+ + E +G + R+ A D+D N Y + F + T
Sbjct: 898 PVFTQPRYDCYIVEDSSDVRNDNGSSGCRIEAIDSDSINNDTTYSINGSSSSYFNIGPTT 957
Query: 153 GDI--RTNKALDYEKQQLYL 170
G I + + +DYE+ L++
Sbjct: 958 GLIMAKDSIVIDYERNHLFV 977
Score = 35.4 bits (80), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 16/102 (15%)
Query: 88 VNIRVTDINDKNPEF--------QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA-VVYY 138
+ I VTD+ND P F + + +SV E D + +GR+ DAD + + +
Sbjct: 3474 IEITVTDVNDNPPAFLCSHDHTHNCMNHSYSVRENIDNVILGRMRVIDADTVTDPNQIRF 3533
Query: 139 SVPE---DIP----FVVDANTGDIRTNKALDYEKQQLYLERV 173
S+ DI F +D+ TG++ LD E++ Y+ V
Sbjct: 3534 SIASGGVDINNRTLFSIDSITGNLSLLSPLDREERDSYVVMV 3575
>gi|332237932|ref|XP_003268160.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 2 [Nomascus leucogenys]
Length = 2871
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 84/181 (46%), Gaps = 26/181 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS-YFNLDPAT---EHQG 74
Y R+ E+G ++ V+ATD D+ + YRLL+ + + S F +DP + +G
Sbjct: 301 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRSGVIRTRG 360
Query: 75 PI------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D G S+TA V + V D ND P+F V E
Sbjct: 361 PVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKXXXXQVREDVT 420
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLER 172
G V RV A+D D+G NA+V+YS+ F +DA TG + LDYE + Y R
Sbjct: 421 PGXPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLR 480
Query: 173 V 173
V
Sbjct: 481 V 481
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 75/162 (46%), Gaps = 22/162 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LDPATEHQGPIQ- 77
G +++V A+D+D G LV Y ++ N Y + LD T + ++
Sbjct: 422 GXPVLRVTASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLRV 481
Query: 78 --DEGG---LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
+GG LS+ + V ++V DIND P F S P++ +V E G V V A DAD
Sbjct: 482 RAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYLVLHVQAIDADA 541
Query: 131 GQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G NA + Y V D PF ++ TG I LD E+ Y
Sbjct: 542 GDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFY 583
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------------AASYFNLDPATEHQ-- 73
+G +++ V A D+D+ ++ Y++ NT + LD E Q
Sbjct: 632 VGTSVVTVSAVDRDA--HSVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYV 689
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G TA + + VTD N P FQS Y +V E + G V + ATD D G
Sbjct: 690 LAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 749
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + IP F +DA+TG + T LDYE Q Y
Sbjct: 750 ENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSY 788
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 33/181 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPATE---- 71
Y A + G + ++A D D G+ G +EY L D+ ++ +F+LDP T
Sbjct: 193 YQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSN--QFFSLDPTTGAVTT 250
Query: 72 -------------HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ QD G S+ AT+ I VTD ND +P F+ Y+ S+ E +
Sbjct: 251 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 310
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV-------PEDIPFVVDANTGDIRTNKALDYEKQQL 168
G V V ATD D NA + Y + P ++ F +D +G IRT +D E+ +
Sbjct: 311 VGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEV-FEIDPRSGVIRTRGPVDREEVES 369
Query: 169 Y 169
Y
Sbjct: 370 Y 370
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLDPATEHQGPIQD- 78
+++Q+ ATD+DSG G V Y + + LD Q ++
Sbjct: 840 SVLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAY 899
Query: 79 --EGGLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
+ G+ T V + V D+ND P F+ ++ V E GLAV RV ATD DEG
Sbjct: 900 AVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGT 959
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 960 NAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYEDRPEYI 1000
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSSTA 86
G T++ + ATD+D+G+ + Y + D+ F +D A Q + E +S T
Sbjct: 735 GTTVVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTL 790
Query: 87 TVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
+ R V D+ND P+F Y+ SV E +V ++ ATD D
Sbjct: 791 AITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRD 850
Query: 130 EGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N V+Y+ D F+V++ +G +RT + LD E Y+ R + + K
Sbjct: 851 SGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYAVDK 903
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 32/163 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G+ + +V ATD D G + Y++++ N F LD + + D
Sbjct: 943 IGLAVARVTATDPDEGTNAQIMYQIVEGNI--PEVFQLDIFSGELTALVDLDYEDRPEYI 1000
Query: 79 ------EGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRV 123
L S ATV++R+ D ND P + F S P G A+GRV
Sbjct: 1001 LVIQATSAPLVSRATVHVRLLDRNDNPPVLGNFEILFNNYVTNRSSSFPGG----AIGRV 1056
Query: 124 HATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
A D D + + ++ V ++A+TG+++ ++ALD +
Sbjct: 1057 PAHDPDISDSLTYSFERGNELSLVLLNASTGELKLSRALDNNR 1099
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 32/136 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASY-------------FN 65
LG ++ V+A D D+G +EYRL ++N T S F
Sbjct: 527 LGYLVLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFYSFG 586
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
++ A +H P L+++A+V++ V D+ND NP F Y + E G +V V
Sbjct: 587 VE-ARDHGTP-----ALTASASVSVTVLDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVS 640
Query: 125 ATDADEGQNAVVYYSV 140
A D D ++V+ Y +
Sbjct: 641 AVDRDA--HSVITYQI 654
Score = 39.3 bits (90), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 100 PEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV------PEDIPFVVDANT 152
P+FQ Y+ +VPE Q G V + A D DEG+ + Y++ + F +D T
Sbjct: 186 PQFQPPSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPTT 245
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G + T + LD E + ++ RV
Sbjct: 246 GAVTTAEELDRETKSTHVFRV 266
>gi|327288704|ref|XP_003229066.1| PREDICTED: cadherin-24-like [Anolis carolinensis]
Length = 795
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 83/186 (44%), Gaps = 32/186 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGP 75
Y A + +G +++QV A D D +G RL+ + +F++DP T P
Sbjct: 161 YHATVPEMSNVGTSVIQVTAQDADDPLYG-NSARLVYTVLEGLPFFSVDPQTGVIRTATP 219
Query: 76 IQDE-------------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
D GGLS + TV + ++D+ND P F Y+FSV E
Sbjct: 220 NMDRETQQEFLVVVQAKDMGGHAGGLSGSTTVTVTLSDVNDNPPRFPQSSYQFSVVETAP 279
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV------PEDIPFVVDA--NTGDIRTNKALDYEKQQ 167
G VGR+ A D DEG+NA++ YS+ E D+ G I K LD+E ++
Sbjct: 280 PGSVVGRLRAHDPDEGENALLAYSILDGGDGAEAFAIHTDSLGQDGIITVKKPLDFESRR 339
Query: 168 LYLERV 173
Y RV
Sbjct: 340 SYTFRV 345
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 63/127 (49%), Gaps = 22/127 (17%)
Query: 50 EYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF 109
+Y LL D AS L+P +E I+V DIND P F PY
Sbjct: 120 QYTLLAQAVDRASNRPLEPPSE----------------FIIKVQDINDNPPVFLHGPYHA 163
Query: 110 SVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIPFV-VDANTGDIRT-NKALDY 163
+VPE + G +V +V A DAD+ G +A + Y+V E +PF VD TG IRT +D
Sbjct: 164 TVPEMSNVGTSVIQVTAQDADDPLYGNSARLVYTVLEGLPFFSVDPQTGVIRTATPNMDR 223
Query: 164 EKQQLYL 170
E QQ +L
Sbjct: 224 ETQQEFL 230
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLY 169
G + + +GR+H TD D G+ + Y E FV+D TG+I K LD E++ Y
Sbjct: 65 GPEPVLIGRLH-TDVDRGEGRIKYVLTGEGAGTVFVIDEKTGNIHVTKTLDREEKAQY 121
>gi|148684875|gb|EDL16822.1| mCG19711 [Mus musculus]
Length = 3278
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 28/162 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGP- 75
G +++V A D D G G + Y L +F++DP + E Q
Sbjct: 470 GSFVVRVTARDPDQGTNGQITYSLAPGTH--THWFSIDPTSGIITTAATLDYELEPQPQL 527
Query: 76 --IQDEGGLS---STATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ +GGL S+ATV++ + D+ND P+FQ Y S+PEG Q G +V ATDAD
Sbjct: 528 IVVATDGGLPPLVSSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDAD 587
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEK 165
G ++ YS+ + PF +DA++GD+ T + LD ++
Sbjct: 588 SGPFGLLSYSLGAGLGASGSPPFRIDAHSGDVCTTRTLDRDQ 629
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 22/161 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN--NTDAASYFNLDPAT--- 70
SL ++A ++ G + + A D D+G FG + Y LL+ + F+L+ +T
Sbjct: 2689 SLLSTSLAENQPP-GTLVTTLHAIDGDAGTFGRLRYSLLEAVPGPEGREAFSLNSSTGEL 2747
Query: 71 --------EHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
EH G + D G LS++ TV++ +T ++ +P F + + F VPEG Q
Sbjct: 2748 RARVPFDYEHTGSFRLLVGAADAGNLSASVTVSVLITGEDEYDPVFLAPSFHFQVPEGAQ 2807
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDI 155
G ++G V ATD D G + +V YS+ P F ++ TG +
Sbjct: 2808 RGHSLGHVQATDEDGGADGLVLYSLATSSPYFGINQTTGAL 2848
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 74/162 (45%), Gaps = 29/162 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY--------------RLLDNNTDAASY 63
FY A + + G +QV ATD DSG FGL+ Y R+ ++ D +
Sbjct: 563 FYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGASGSPPFRIDAHSGDVCTT 622
Query: 64 FNLDPATEHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEG 114
LD QGP D GGL S V + V D ND P+F Y S+ +
Sbjct: 623 RTLD---RDQGPSSFDFTVTAIDGGGLKSMVYVKVFVADENDNPPQFYPREYAASLSAQS 679
Query: 115 QDGLAVGRVHATDADEGQNA-VVYYSVPEDIP--FVVDANTG 153
G AV RVHA D D+G + + Y+ + + P F +DA++G
Sbjct: 680 TPGTAVLRVHAHDPDQGPHGRLSYHILAGNSPPLFALDAHSG 721
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 24/160 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDA---ASYFNLDPATEHQGP 75
+G L+ V+A+D D G GLV + L LD N+ A + + + +HQ
Sbjct: 2597 VGAELLHVEASDADPGPHGLVHFTLSSGDPLGLFELDENSGALRLSRPLDCETQAQHQLV 2656
Query: 76 IQ--DEGGLS-STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEG 131
+Q D G S V + V D+ND P F S+ E Q G V +HA D D G
Sbjct: 2657 VQAADPAGTHFSLVPVTVEVQDVNDHGPAFPLSLLSTSLAENQPPGTLVTTLHAIDGDAG 2716
Query: 132 QNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYE 164
+ YS+ E +P F ++++TG++R DYE
Sbjct: 2717 TFGRLRYSLLEAVPGPEGREAFSLNSSTGELRARVPFDYE 2756
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL---------------DPATEHQGPI 76
TL ++A+D D G G ++YR+LD ++ A +L +PA + Q
Sbjct: 1748 TLTTLRASDPDGGLNGQLQYRILDGDSSGAFALDLTSGEFGTMRPLDREVEPAFQLQIEA 1807
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQN 133
+D G LS+T V + V D ND P F Y VPE G + ++ A D D+G N
Sbjct: 1808 RDGGQPALSATLLVTVTVLDANDHAPVFPVPSYSVEVPEDAPVGTLLLQLQAHDPDDGDN 1867
Query: 134 AVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSYL 184
V Y + F+++ +G++ T ALD E Y V + A L
Sbjct: 1868 GRVMYYLGAGTAGAFLLEPTSGELSTATALDREHCASYAFSVTAVDGAAAGPL 1920
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 78/178 (43%), Gaps = 30/178 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + R+ G +L+ +KATD D G G V Y + + F+LDP T
Sbjct: 1634 YNVILRENSPPGTSLLTLKATDPDLGANGQVTYGGVSGES-----FSLDPNTGVLTTLRA 1688
Query: 71 ---EHQGPI------QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
E Q I +D G L + TV + V D ND P F + VPEGQD
Sbjct: 1689 LDREEQEEIYLTVYARDRGLPPLLTHITVRVTVEDENDHTPTFGNTHLSLEVPEGQDPQT 1748
Query: 120 VGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQ---QLYLE 171
+ + A+D D G N + Y + + F +D +G+ T + LD E + QL +E
Sbjct: 1749 LTTLRASDPDGGLNGQLQYRILDGDSSGAFALDLTSGEFGTMRPLDREVEPAFQLQIE 1806
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A +++ + DIND P F Y V E G V +V A+DAD G N V Y +
Sbjct: 220 ALLDVTLLDINDHAPAFNQSRYHAVVSESLAPGSPVLQVFASDADAGANGAVTYEINRRQ 279
Query: 143 ---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D PF +DA+TG +R + LD+E+++++
Sbjct: 280 SEGDGPFSIDAHTGFLRLERPLDFEQRRVH 309
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 72/172 (41%), Gaps = 33/172 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ 77
+G L+Q++A D D G G V Y L A F L+P + EH
Sbjct: 1850 VGTLLLQLQAHDPDDGDNGRVMYYL---GAGTAGAFLLEPTSGELSTATALDREHCASYA 1906
Query: 78 ---------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-----GQDGLAVGRV 123
G LS+T + I V D+ND P F + P +P + LA+ +
Sbjct: 1907 FSVTAVDGAAAGPLSTTVPITITVRDVNDHAPAFPTSPLRLRLPRPGPSLNKPTLALATL 1966
Query: 124 HATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNK---ALDYEKQQLYL 170
A D D G NA + Y + P VD+ TG+IR + AL + + L++
Sbjct: 1967 RAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARSPVALGPQDRVLFI 2018
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
SS V + V D+ND P F Y +VPE G + V A+DAD G + +V++++
Sbjct: 2563 SSAVPVTVTVLDVNDNPPVFTRASYRVTVPEDMPVGAELLHVEASDADPGPHGLVHFTLS 2622
Query: 142 EDIP---FVVDANTGDIRTNKALDYEKQ 166
P F +D N+G +R ++ LD E Q
Sbjct: 2623 SGDPLGLFELDENSGALRLSRPLDCETQ 2650
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY 138
G + TATV + + + ND +P P +V E Q G +VGRV ATD D G N + Y
Sbjct: 1064 GQQTGTATVRVIILNQNDHSPRLSEEPTFLAVAENQPPGTSVGRVFATDRDSGPNGRLTY 1123
Query: 139 SVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
S+ + F + TG++ T + LD E+Q +
Sbjct: 1124 SLQQLSEDSKAFRIHPQTGEVTTLQTLDREQQSSF 1158
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 35/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G ++ +V ATD+DSG G + Y L + D+ + F + P T E Q Q
Sbjct: 1102 GTSVGRVFATDRDSGPNGRLTYSLQQLSEDSKA-FRIHPQTGEVTTLQTLDREQQSSFQL 1160
Query: 78 ----DEGG---LSSTATVNIRVTDINDKNPEF--------QSLPYEF--SVPEGQDGLAV 120
+GG S+T TV++ V D+ND +P F LP + VP G V
Sbjct: 1161 LVQVQDGGSPPRSATGTVHVAVLDLNDNSPTFLQASGAAGGGLPIQVPDRVPPGT---LV 1217
Query: 121 GRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ A D DEG+N + Y++ P F + +TG++ T +L ++ Y+
Sbjct: 1218 TTLQAKDPDEGENGTILYTLTGPGSELFSLHPHTGELHTAASLVRAERPHYV 1269
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 70/164 (42%), Gaps = 28/164 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYFN-LDP----------- 68
G + V A D D G+ V YRL L T A S LD
Sbjct: 1541 GPAALHVVARDPDLGEAARVSYRLAAGGDGHFRLHATTGALSVVRPLDREQRAEHVLTVV 1600
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
A +H P + SST + + V D+ND+ P F Y + E G ++ + ATD
Sbjct: 1601 ALDHGSPPR-----SSTQLLTVSVVDVNDEAPAFPQQEYNVILRENSPPGTSLLTLKATD 1655
Query: 128 ADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQ-QLYL 170
D G N V Y F +D NTG + T +ALD E+Q ++YL
Sbjct: 1656 PDLGANGQVTYGGVSGESFSLDPNTGVLTTLRALDREEQEEIYL 1699
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 65/147 (44%), Gaps = 28/147 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------- 68
Y M + G ++ V ATD+DSG G + Y L A F +DP
Sbjct: 2360 LYQVMMLEHTPPGSAILSVSATDRDSGANGHISYHL----ASPAEGFRVDPNNGTLFTTV 2415
Query: 69 ---ATEHQGP--------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG- 114
A H+GP +D G G ++ ATV++++ D ND P F Y +V E
Sbjct: 2416 GAMALGHEGPGVVDVVLEARDHGAPGRTAQATVHVQLKDQNDHAPSFTLPHYRVAVSEDL 2475
Query: 115 QDGLAVGRVHATDADEGQ-NAVVYYSV 140
G + + ATDAD + +A V YS+
Sbjct: 2476 PPGSTLLTLEATDADGSRTHATVDYSI 2502
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG---- 74
Y A + G +++V A D D G G + Y +L N+ F LD H G
Sbjct: 671 YAASLSAQSTPGTAVLRVHAHDPDQGPHGRLSYHILAGNS--PPLFALD---AHSGLLTV 725
Query: 75 --PI--------------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ QD GGL + A VNI + P F+ L Y FSVPE
Sbjct: 726 AWPLGRRANSVVQLEIGAQDGGGLQAEPIARVNISIVPGTPTPPIFEQLQYVFSVPEDVA 785
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
G +VG + A + G+ V ++ P F +D+ +G ++T + LD E LE
Sbjct: 786 PGTSVGIIQAHNP-PGRLGPVTLTLSGGDPRGLFSLDSPSGLLKTLRPLDRELLGPVLE 843
Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 70/180 (38%), Gaps = 39/180 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + L L+QV+A D D G G + Y L + A F++DP
Sbjct: 2156 YVAFLPESRPLEGPLLQVEADDLDQGSGGQISYSLAASQP-ARGLFHVDPATGTITTTAI 2214
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
AT+ P L +AT+ + V D ND P P+E V E
Sbjct: 2215 LDREIWAETRLVLMATDRGSP-----ALVGSATLTVMVIDTNDNRPTIPQ-PWELRVSED 2268
Query: 114 GQDGLAVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + +V D D G V++Y S P+D PF + G + LD+E+ Y
Sbjct: 2269 ALLGSEIAQVTGNDVDSG--PVLWYVLSPSGPQD-PFSIGRYGGRVSLTGPLDFEQCDHY 2325
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 68/173 (39%), Gaps = 31/173 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH----------------- 72
G + ++A D DSG + + LL F +DP T H
Sbjct: 891 GTPIYTLRALDPDSGANSRITFNLLAGGD---GLFTVDPTTGHVRLMGPLGPPGGPAHEL 947
Query: 73 QGPIQDEGGLSSTATVNIRVT----DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+ +D G T+ +RV I+ P F S Y +P G G + +V A
Sbjct: 948 EVEARDGGSPPRTSHFRLRVVIQDLGIHGLAPRFDSPTYRVDLPSGTTTGTQILQVQAQA 1007
Query: 128 ADEGQNAVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D + V Y + D PF +++ +G + ALD E Q+LY +V +S
Sbjct: 1008 PD---GSPVTYHLAADGASSPFGLESQSGWLWVRTALDRESQELYTLKVMAVS 1057
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 44/93 (47%), Gaps = 15/93 (16%)
Query: 82 LSSTATVNIRVTDINDKNPEF-------QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
L + A + VTD+ND P F + LP E ++P G V RV A D D+G N
Sbjct: 433 LRAEAAFVLHVTDVNDNAPAFDRQLYRPEPLP-EVALP----GSFVVRVTARDPDQGTNG 487
Query: 135 VVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
+ YS+ F +D +G I T LDYE
Sbjct: 488 QITYSLAPGTHTHWFSIDPTSGIITTAATLDYE 520
Score = 38.9 bits (89), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD-EGQNAVVYYSVPEDIP 145
V +RV D N+ P F P ++PE D G + A+DAD G N+ V Y + P
Sbjct: 1402 VQVRVQDENEHAPTFARDPLALALPENPDPGATLYTFRASDADGPGPNSEVRYRLLRQEP 1461
Query: 146 FV----VDANTGDIRTNKALDYEKQQLYL 170
V +DA TG + + LD E L
Sbjct: 1462 PVPALRLDARTGALSAPRGLDRETTPALL 1490
>gi|441620238|ref|XP_004088652.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Nomascus
leucogenys]
Length = 4585
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI-- 76
L +M+VK TD+DSG +G V Y ++++ Y N LD T + I
Sbjct: 2504 LHTLVMEVKTTDRDSGIYGHVTYHIVNDFAKDRFYINERGQIFTLEKLDRETPAEKVISV 2563
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEG 131
+D+GG + TVN+ +TD ND P+F++ YE ++ G +V +V A+DADEG
Sbjct: 2564 RLMAKDDGGKVAFCTVNVILTDDNDNAPQFRATKYEVNIGSSAAKGTSVIKVLASDADEG 2623
Query: 132 QNAVVYYSVPED 143
NA V Y++ D
Sbjct: 2624 SNADVTYAIEAD 2635
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 75/160 (46%), Gaps = 23/160 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ ATD D + Y LL + A F L+P T E Q
Sbjct: 3036 GKLIMQISATDADIRSNAEITYTLLGS---GAEKFKLNPDTGELRTSTPLDREEQAVYHL 3092
Query: 78 -----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D GG A+V + + D+ND PEF + PY +V E + G + RV ATDAD G
Sbjct: 3093 LVRATDGGGRFCQASVVLTLEDVNDSAPEFSADPYAITVFENTEPGTLLTRVQATDADAG 3152
Query: 132 QNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
N + YS+ + D F ++ +G I+ K LD E Q +Y
Sbjct: 3153 LNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVY 3192
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 87/176 (49%), Gaps = 29/176 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
++ ++ DK E+ ++QV+ATDKD G G V Y +L +TD F++D T
Sbjct: 827 YFVEVSEDK-EVHSEIIQVEATDKDLGPNGHVTYSIL-TDTDT---FSIDSVTGVVKIAR 881
Query: 71 --------EHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
EH I+ +E L ST + + + D+ND P+F Y V E
Sbjct: 882 PLDRELQHEHYLKIEARDQAREEPQLFSTVILKVSLEDVNDNPPKFIPPNYRVKVREDLP 941
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
+G + + A D D GQ+ V YS+ + + F VD +G +R + LD+EK+Q+Y
Sbjct: 942 EGTVIMWLEAHDPDLGQSGQVRYSLMDHGEGNFDVDKLSGAVRIVQQLDFEKKQVY 997
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 72/141 (51%), Gaps = 14/141 (9%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKN 99
D+ SG+ L + LD+ T F++ QD+ + ++ V+I+V D ND +
Sbjct: 2751 DRQSGRLKL--EKSLDHETTKWYQFSILARC-----TQDDHEVVASVDVSIQVKDANDNS 2803
Query: 100 PEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI------PFVVDANT 152
P F+S PYE F V G V ++ A+DAD G N+ V YS+ + F ++ T
Sbjct: 2804 PVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNSQVMYSLDQSQSVEVIESFAINMET 2863
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G I T K LD+EK+ Y +V
Sbjct: 2864 GWITTLKELDHEKRDNYQIKV 2884
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 77/169 (45%), Gaps = 25/169 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--------TDAASYF---NLD 67
YGA + +G ++QV A +D + Y ++ N + + F NLD
Sbjct: 3232 YGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLD 3291
Query: 68 PATEHQGPIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--- 118
+ H+ + E GG LS ATVNI VTDIND P F Y + E D +
Sbjct: 3292 YESSHEYYLTVEATDGGTPSLSDVATVNINVTDINDNTPVFSQDTYTAVISE--DAVLEQ 3349
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
+V V A DAD N+ ++YS+ + F +D G+++ K LD E
Sbjct: 3350 SVITVMADDADGPSNSHIHYSIIDGNQGSSFTIDPIRGEVKVTKLLDRE 3398
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 81/183 (44%), Gaps = 23/183 (12%)
Query: 8 SALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD 67
SA E ++D Y + E G L +V+ATD D+G + Y L+D+ S L
Sbjct: 3118 SAPEFSADP--YAITVFENTEPGTLLTRVQATDADAGLNRKILYSLIDSADGQFSINELS 3175
Query: 68 PATEHQGPIQ--------------DEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFS 110
+ + P+ D+G L++T TV + V DIND P F+ Y +
Sbjct: 3176 GIIQLEKPLDRELQAVYTLSLKAVDQGLPRRLTATGTVVVSVLDINDNPPVFEYREYGAT 3235
Query: 111 VPEG-QDGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQ 166
V E G V +V+A D NA + YS+ E F +D+ TG + + LDYE
Sbjct: 3236 VSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESS 3295
Query: 167 QLY 169
Y
Sbjct: 3296 HEY 3298
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVY 137
+G SS A V ++V D ND +P + Y ++PE G + ++ ATDAD NA +
Sbjct: 2997 DGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPEDVLPGKLIMQISATDADIRSNAEIT 3056
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ F ++ +TG++RT+ LD E+Q +Y
Sbjct: 3057 YTLLGSGAEKFKLNPDTGELRTSTPLDREEQAVY 3090
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 23/160 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV+ATD DS + Y + N + + +F++D T
Sbjct: 2285 YAATLSEASVIGTSVVQVRATDSDSEPNRGISYHMFGNLSKSHDHFHVDSNTGLISLLRT 2344
Query: 71 -------EHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
+H ++ +GG LSS V + VTD+ND P F+ YE + E G
Sbjct: 2345 LDYEQSRQHTIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPHGH 2404
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
V V A DAD + YS+ + FV+D+ TG I
Sbjct: 2405 FVTCVKAYDADSSDADKLQYSILSGNDHKHFVIDSATGII 2444
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 2/144 (1%)
Query: 37 KATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIN 96
KA + G F + R NT + D T ++ + + V ++V D N
Sbjct: 84 KAEEYILGDFCFLRIRTKGGNTAILNREVKDHYTLIVKALEKNTNVEARTKVRVQVLDTN 143
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGD 154
D P F Y S+PE ++ RV ATDAD G N YYS + F + +G
Sbjct: 144 DLRPLFSPTSYSVSLPENTAIRTSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGV 203
Query: 155 IRTNKALDYEKQQLYLERVFLISK 178
I LDY + +LY + + +
Sbjct: 204 IVLTGRLDYLETKLYEMEILAVDR 227
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 69/160 (43%), Gaps = 24/160 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE-------------HQGPI--- 76
++Q+ A D+D K L+ + + F LDPAT HQ +
Sbjct: 1472 ILQISAVDQDE-KNKLIYTLQSSRDPLSLKKFRLDPATGSLYTSEKLDHEAVHQHTLTVM 1530
Query: 77 ---QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
QD + A + + V+D ND P F + Y+ V E G V +V A D D+G+
Sbjct: 1531 VRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVTALDKDKGK 1590
Query: 133 NAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
NA V YS+ FV+D G I+T K LD Q Y
Sbjct: 1591 NAEVLYSIESGNIGNSFVIDPVLGSIKTAKELDRSNQVEY 1630
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE- 142
+ V ++V N PEF Y+ + E G V + A D DEG+N V YS+
Sbjct: 446 STKVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYSIANL 505
Query: 143 -DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSY 183
+PF +D TG + T++ LDYE + RV+ + A+ +
Sbjct: 506 NHVPFAIDHFTGAVSTSENLDYE----LMPRVYTLRIRASDW 543
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 19/173 (10%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQGPIQD 78
G ++ +G +++ + +TD D+G G + Y + N D+ +++ + P+
Sbjct: 723 GIQVKENQPVGSSVIFMNSTDLDTGFNGKLVYAISGGNEDSCFMIDMETGMLKILSPLDR 782
Query: 79 EG-------------GLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VG 121
E G+ A +++ V D ND PEF Y V E ++ + +
Sbjct: 783 ETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSEDKEVHSEII 842
Query: 122 RVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYLERV 173
+V ATD D G N V YS+ D F +D+ TG ++ + LD E Q + ++
Sbjct: 843 QVEATDKDLGPNGHVTYSILTDTDTFSIDSVTGVVKIARPLDRELQHEHYLKI 895
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 34/178 (19%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-- 70
TS+ ++Y + + + V+++Q++A D DS + Y++ N +F++ P T
Sbjct: 1139 TSEPVYYPEIMENSPK-DVSVVQIEAFDPDSSSSDKLMYKITSGNPQG--FFSIHPKTGL 1195
Query: 71 --------------EH--QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH + + D G S+ A V +++ D ND P+F Y+ +P
Sbjct: 1196 ITTTSRKLDREQQDEHILEVTVTDSGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLP 1255
Query: 113 EGQ----DGLA----VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNK 159
E + D A + RV ATD D+G NA + YS+ E F ++ TG + + +
Sbjct: 1256 EREKPDRDRNAKREPLYRVIATDKDDGPNAEISYSIEDGNEHGKFFIEPKTGVVSSRR 1313
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 75/176 (42%), Gaps = 34/176 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + +G ++QV A DKD GK V Y + N + F +DP G I+
Sbjct: 1564 YKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSIESGNI--GNSFVIDPVL---GSIKT 1618
Query: 78 -------------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
D+G +S +V I +T ++ +P+F S Y + E
Sbjct: 1619 AKELDRSNQVEYDLMVKATDKGSPPMSEITSVRIFITIADNASPKFTSKEYSVEISETVS 1678
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
G VG V A Q++VVY +I F ++ ++G I T KALD+E +Y
Sbjct: 1679 IGSFVGMVTA----HSQSSVVYEIKDGNIGDAFDINPHSGTIITQKALDFETLPIY 1730
Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G + V+I V DIND P F Y ++ E G +V +V ATD+D N + Y
Sbjct: 2259 GAHAEVFVDIIVEDINDNPPVFAQQSYAATLSEASVIGTSVVQVRATDSDSEPNRGISYH 2318
Query: 140 VPEDIP-----FVVDANTGDIRTNKALDYEKQQLY 169
+ ++ F VD+NTG I + LDYE+ + +
Sbjct: 2319 MFGNLSKSHDHFHVDSNTGLISLLRTLDYEQSRQH 2353
Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 74/169 (43%), Gaps = 28/169 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLDPAT---------EHQGP---- 75
G ++Q++A+D DSG V Y L + + F ++ T +H+
Sbjct: 2822 GSRVIQIRASDADSGTNSQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQ 2881
Query: 76 ----IQDEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
D G LSSTA V++ VTD+ND P F + Y+ +V E G + + TD
Sbjct: 2882 IKVVASDHGEKIHLSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSEDDPPGGVIAILSTTD 2941
Query: 128 AD-EGQNAVVYYSVPEDIP---FVVD--ANTGDIRTNKALDYEKQQLYL 170
AD E N V Y + P F V+ N + K LD EK+ YL
Sbjct: 2942 ADSEEINRQVTYFITGGDPLGQFAVENIQNEWKVYVKKPLDREKRDNYL 2990
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 34/178 (19%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
+L Y A+ + E+G + V A D+DSG+ G V Y L +++ +F + P E
Sbjct: 2080 NLPYYAIVKVDTEVGHVIRYVTAVDRDSGRNGEVHYYLKEHH----EHFQIGPLGEISLK 2135
Query: 76 IQ-----------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
Q D G + +A V + +T +N P F+ Y + E
Sbjct: 2136 KQFELDTLNKEYLVAVVAKDGGNPAFSAEVIVPITVMNKAMPVFEKPFYSAEIAENI--- 2192
Query: 119 AVGRVHA----TDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+VH+ A+ + V+YS+ + P F ++ NTG I LD+E Y
Sbjct: 2193 ---QVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAPLDFEAHPAY 2247
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 11/101 (10%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR--------VHATDADEG 131
GLS+ TV + + D ND F Y + E +V + ATDAD+
Sbjct: 1740 AGLSTNTTVLVHLQDENDNCQFFMQAEYTGLIVESASINSVVLTDRNVPLVIRATDADKD 1799
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
NA++ Y + E F +D++TG I T +LDYE+ ++
Sbjct: 1800 SNALLVYHIVEPSVHKYFAIDSSTGAIHTVLSLDYEETSIF 1840
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 78 DEGGLSSTAT-VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAV 135
D G ++ T V I+V D ND P+F + YE +PE + ++ A D DE +N +
Sbjct: 1428 DTGRTTTILTQVFIKVIDTNDHRPQFSTSKYEVVIPEDTAPETEILQISAVDQDE-KNKL 1486
Query: 136 VYYSVPEDIP-----FVVDANTGDIRTNKALDYE 164
+Y P F +D TG + T++ LD+E
Sbjct: 1487 IYTLQSSRDPLSLKKFRLDPATGSLYTSEKLDHE 1520
Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 30/171 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDN---------------------NTDAASYFNLD 67
+G +M V A D+D+G+ G + Y + D + ++ S++ L
Sbjct: 1049 IGSLVMTVSAHDEDAGRDGEIRYSIRDGSGVGVFRIGEETGVIETSDRLDHESTSHYWLT 1108
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
QG + LSS + I V D+ND P+ Y + E ++V ++ A
Sbjct: 1109 VFATDQGVVP----LSSFMEIYIEVGDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAF 1164
Query: 127 DADEGQNAVVYYSVPEDIP---FVVDANTGDI-RTNKALDYEKQQLYLERV 173
D D + + Y + P F + TG I T++ LD E+Q ++ V
Sbjct: 1165 DPDSSSSDKLMYKITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILEV 1215
Score = 36.2 bits (82), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 73/189 (38%), Gaps = 39/189 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y A+ + L +++ V A D D + Y ++D N S F +DP +G ++
Sbjct: 3337 YTAVISEDAVLEQSVITVMADDADGPSNSHIHYSIIDGN--QGSSFTIDPI---RGEVKV 3391
Query: 78 ----DEGGLS-----------------STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
D +S +T TVNI V+D+ND P F Y + E +
Sbjct: 3392 TKLLDRETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQENKP 3451
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
G +V ++ TD D N PF TG+ KA + +Q + L +
Sbjct: 3452 VGFSVLQLVVTDEDSSHNGP---------PFFFTIVTGN--DEKAFEVNQQGVLLTSSAI 3500
Query: 176 ISKFATSYL 184
K YL
Sbjct: 3501 KRKEKDHYL 3509
Score = 35.4 bits (80), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 27/137 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYF-NLD- 67
Y A + +G T+M + A D D G+ G V Y + +D+ T A S NLD
Sbjct: 468 YKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYSIANLNHVPFAIDHFTGAVSTSENLDY 527
Query: 68 -----------PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
A++ P + E + +T T+N ++ND P F+ + E ++P
Sbjct: 528 ELMPRVYTLRIRASDWGLPYRREVEVLATITLN----NLNDNTPLFEKINCEGTIPRDLG 583
Query: 117 -GLAVGRVHATDADEGQ 132
G + V A DADE Q
Sbjct: 584 VGEQITTVSAIDADELQ 600
>gi|198460509|ref|XP_001361746.2| GA11265 [Drosophila pseudoobscura pseudoobscura]
gi|198137039|gb|EAL26325.2| GA11265 [Drosophila pseudoobscura pseudoobscura]
Length = 3592
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 79/172 (45%), Gaps = 28/172 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP----------------ATEH 72
+G +++QV A+D D G G ++Y L D + + S F +DP A H
Sbjct: 1027 VGTSVIQVSASDPDIGLNGRIKYLLSDRDVEDGS-FVIDPTSGTVRTNKGLDRESVAVYH 1085
Query: 73 QGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
I + G LSS+ V IR+ D+ND P F S VPE G VG +HA D
Sbjct: 1086 LTAIAVDKGSPPLSSSVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDP 1145
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIR----TNKALDYEKQQLYLERV 173
DEG NAVV+YS+ + F + G R T LDYE + E V
Sbjct: 1146 DEGVNAVVHYSIIGGDDSNSFSLVTRPGSERAQLLTMTELDYESSRKRFELV 1197
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 83/178 (46%), Gaps = 27/178 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPATEH--- 72
Y A + +G T++ V ATD D G + Y L + N + F+++P T
Sbjct: 907 YSASVFEDAPVGTTVLVVSATDSDVGINAQITYSLNEESINGLGSPDPFSINPQTGAIVT 966
Query: 73 QGPIQDE-------------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
P+ E GG LS T V I VTD+ND P F++ Y+ S+ E
Sbjct: 967 NAPLDRETTSGYLLTVTAKDGGSPSLSDTTDVEISVTDVNDNAPVFKNPLYQSSILEDAL 1026
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G +V +V A+D D G N + Y + ED FV+D +G +RTNK LD E +Y
Sbjct: 1027 VGTSVIQVSASDPDIGLNGRIKYLLSDRDVEDGSFVIDPTSGTVRTNKGLDRESVAVY 1084
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 55/102 (53%), Gaps = 9/102 (8%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG S TATV+I +TD N+ P F++ PY SV E G V V ATD+D G NA +
Sbjct: 878 DSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGINAQI 937
Query: 137 YYSVPEDI--------PFVVDANTGDIRTNKALDYEKQQLYL 170
YS+ E+ PF ++ TG I TN LD E YL
Sbjct: 938 TYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYL 979
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 83/191 (43%), Gaps = 44/191 (23%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS--------YFNLDPAT 70
+ A R+ +G T++ ++ATD+D GK +EY + + TD F +D
Sbjct: 474 FEASIREGATVGSTVITLRATDQDIGKNAEIEYGI-ETVTDGTGSTQDQELPIFRID--- 529
Query: 71 EHQGPIQDEGGL-------------------------SSTATVNIRVTDINDKNPEFQSL 105
G I L ++TA+V ++V D ND P+F
Sbjct: 530 SRSGVISTRSSLDRETSDSYHLLVTASDMAAAQSERKTATASVLVKVLDDNDNYPQFSER 589
Query: 106 PYEFSVPEGQDGLA----VGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTN 158
Y VPE Q G + V + ATDAD+G NA + Y++ F +D+ +GD+
Sbjct: 590 TYTVQVPEDQWGGSEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLV 649
Query: 159 KALDYEKQQLY 169
K LDYE + Y
Sbjct: 650 KPLDYESVRSY 660
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 76/165 (46%), Gaps = 25/165 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------- 76
T+ ++ATD D G + Y ++ NT S F++D + +
Sbjct: 607 TVAHIRATDADQGNNAAIRYAIIGGNTQ--SQFSIDSMSGDVSLVKPLDYESVRSYRLVI 664
Query: 77 --QDEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
QD G S + T + V D ND P F + ++ SV E G + RV A D+DEG
Sbjct: 665 RAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEG 724
Query: 132 QNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA + YS+ E + P VD TG ++T K LD E+Q + +V
Sbjct: 725 PNAEITYSISERDDNFPLAVDPRTGWVQTIKQLDREEQSRFAFQV 769
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
S T T+ + V D ND +P F++ +E S+ EG G V + ATD D G+NA + Y +
Sbjct: 450 SGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIE 509
Query: 142 -----------EDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+++P F +D+ +G I T +LD E Y
Sbjct: 510 TVTDGTGSTQDQELPIFRIDSRSGVISTRSSLDRETSDSY 549
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 29/167 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP-- 75
+G +++V+A D D G + Y + + + + +DP T E Q
Sbjct: 709 VGYNIIRVQAYDSDEGPNAEITYSISERDDNFP--LAVDPRTGWVQTIKQLDREEQSRFA 766
Query: 76 ---IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDA 128
+ +GG+ S++++V I V D+ND +P F YE +V E Q G V V ATD
Sbjct: 767 FQVVAKDGGVPPKSASSSVVITVQDVNDNDPTFNPKYYEANVGEDQPQGTPVTTVTATDP 826
Query: 129 DEGQNAVVYYSVPEDIP---FVVDANTGD--IRTNKALDYEKQQLYL 170
DE ++ ++Y + F + + G I ++LDY++++ +L
Sbjct: 827 DE--DSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFL 871
>gi|443731666|gb|ELU16708.1| hypothetical protein CAPTEDRAFT_199171 [Capitella teleta]
Length = 1979
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 80/185 (43%), Gaps = 39/185 (21%)
Query: 11 EMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT 70
E T D Y A + LG + + ATD+DSG FG ++Y+L A+S F +DP T
Sbjct: 563 EFTQD--VYNASIYENSALGTNVTTITATDQDSGNFGQIQYKL---RGAASSLFTVDPLT 617
Query: 71 EHQGPI---------------------------QDEGGLSSTATVNIRVTDINDKNPEFQ 103
G I QD GGL + + I++ D+ND P+
Sbjct: 618 ---GLITVAVNANQDLNLLNRERIDEQYLTLEAQDGGGLRTLVQLGIKLLDVNDNAPQIM 674
Query: 104 SLPYEFSVPEGQDGLAVG-RVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNK 159
YE + E D L + ATDAD N + +S+ E P F +D+ TG I
Sbjct: 675 RSFYEGFISENSDSLDRPLMIEATDADLPPNNALSFSIVEGDPFENFTIDSLTGSISVRS 734
Query: 160 ALDYE 164
LDYE
Sbjct: 735 PLDYE 739
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 37/188 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------- 68
FY A + + V+A D+D G + Y + + +++ + F++ P
Sbjct: 1234 FYSASTLENANIDHVFAAVRANDQDEGINAEISYSIDFDASNSTNLFDIQPSNGAVYVKT 1293
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQS--LPYEFSVP 112
AT+H P+ LS++ + + V D+ND +P Q S+P
Sbjct: 1294 TLQGKMGSYQVVVKATDHGFPV-----LSNSTILLVTVEDVNDHSPVIQEPEANATISIP 1348
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEK 165
E G V +V A+DADEG N V + E + F +D G+I TN +D E+
Sbjct: 1349 ENVLAGYHVTQVIASDADEGINGRVQFQFVESLGNTDWKYFTIDRMAGNITTNAVIDREQ 1408
Query: 166 QQLYLERV 173
Q+ Y V
Sbjct: 1409 QEFYFVEV 1416
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Query: 76 IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNA 134
+ D+G L + I + D+ND P F +LPY S+PE G +V +V ATD D G+
Sbjct: 204 VSDKGQLIKRY-LTIYIKDVNDNAPSFVNLPYRASLPEDSPMGTSVFKVSATDPDNGEAG 262
Query: 135 VVYYSV-PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y++ +D F ++ TG++ + LDYE ++ Y
Sbjct: 263 FVSYNITSKDGLFSINTATGEVTLAQDLDYETEKFY 298
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 24/176 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
+L Y A + +G ++ +V ATD D+G+ G V Y N T F+++ AT
Sbjct: 231 NLPYRASLPEDSPMGTSVFKVSATDPDNGEAGFVSY----NITSKDGLFSINTATGEVTL 286
Query: 76 IQ-----------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDG 117
Q D L+ST + I + D+ D P F +LPY S+ E G
Sbjct: 287 AQDLDYETEKFYQLEIIAFDLNNLNSTTDLIINIVDVQDSPPFFFNLPYVTSIAEDAAVG 346
Query: 118 LAVGRVHATDADEGQ-NAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLE 171
V ++ A D D N ++Y + D F +DA TG I +D E Q++ +
Sbjct: 347 TQVLQITAIDGDRSNPNPILYSFIDGDFSYFNIDAKTGWISIKTPIDRENSQIFAQ 402
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 35/183 (19%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
S +Y A + + G +++V A D D G ++YR++ +TD + F + G
Sbjct: 1016 SQYYSARVSEAAKPGTEIVRVVAIDYDKNS-GDIQYRMV-YDTDESLAFEITDLNRQTGI 1073
Query: 76 I--------------------QDEG--GLSSTATVNIRVTDINDKNPEFQSLP-----YE 108
I +D G L S A V + + D+ND +PE+Q +E
Sbjct: 1074 ITLGRSIDRELTSWVNITVIAEDNGTPALRSQAWVYVEIEDVNDNSPEWQVFVDPVELWE 1133
Query: 109 FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQ 166
+ P + V +V ATD D + V Y + D+PFV++ TG I T+ LD E
Sbjct: 1134 NAPPYTE----VTQVKATDQDSLEFGSVLYFLAGDHDVPFVINNLTGLIETSALLDRESH 1189
Query: 167 QLY 169
+Y
Sbjct: 1190 PVY 1192
Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 21/129 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRL---------LDNNT---DAASYFNLDPATEHQGPIQDEG 80
+ QVKATD+DS +FG V Y L ++N T + ++ + + + I+
Sbjct: 1141 VTQVKATDQDSLEFGSVLYFLAGDHDVPFVINNLTGLIETSALLDRESHPVYDITIEARD 1200
Query: 81 GLSSTAT--------VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV-GRVHATDADEG 131
+++ AT + IR+ DIND P+F+ Y S E + V V A D DEG
Sbjct: 1201 NINAPATQQRRTPGYMRIRLKDINDNPPQFEQNFYSASTLENANIDHVFAAVRANDQDEG 1260
Query: 132 QNAVVYYSV 140
NA + YS+
Sbjct: 1261 INAEISYSI 1269
>gi|334347606|ref|XP_003341948.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 1-like [Monodelphis domestica]
Length = 2974
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 84/180 (46%), Gaps = 28/180 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y R+ E+G ++ ++ATD D+ + YRLL+ A F +DP T
Sbjct: 359 YRETVRENLEVGYEVLTIRATDGDAPSNANMRYRLLEG---ADGAFKIDPRTGVVRTRSV 415
Query: 71 -------EHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QD 116
E+Q ++ + G S+TATV I V D ND P+F Y VPE
Sbjct: 416 VDREEVAEYQLLVEANDQGLNPGPRSATATVRILVEDENDNYPQFSEKRYVVQVPEDVAV 475
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
A+ RV ATD D+GQNA ++YS+ F + + +G + LDYE + Y R+
Sbjct: 476 NTAILRVQATDQDQGQNAALHYSIVSGNLKGQFYLHSLSGGLDVINPLDYEAIREYTLRI 535
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 76/159 (47%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQ-- 73
+G +++ ++A D+D+ ++ Y+L NT + LD E Q
Sbjct: 700 VGSSVLTLRARDRDANS--VITYQLSSGNTRNRFALSSQSGGGLITLALPLDYKQERQYV 757
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
G +G S TA V I VTD N P FQS Y SV E + G ++ + ATD D G
Sbjct: 758 LGVTASDGTRSHTAQVFINVTDANTHRPVFQSSHYTVSVREDKPVGSSIATISATDEDTG 817
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + +P F + +TG + T LDYE Q Y
Sbjct: 818 ENARITYVLEDPVPQFGIHPDTGTLVTLMELDYEDQAAY 856
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 79/166 (47%), Gaps = 31/166 (18%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ-------------- 77
+++QV ATD+DSG G + Y + ++ ++P + G I+
Sbjct: 908 SVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFY-IEPTS---GVIRTQRRLDRENVAVYS 963
Query: 78 ------DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
D G LS++ V + V DIND P F+ E V E G V R+ A D
Sbjct: 964 LRALAVDRGSPAPLSASVDVQVTVLDINDNPPVFEQDELELFVEENSPVGSVVARIRAAD 1023
Query: 128 ADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
DEG NA + Y + E ++P F +D +GD+R LD+E+++ Y+
Sbjct: 1024 PDEGPNAQIMYQIVEGNVPEVFQLDLLSGDLRALAELDFERRRDYV 1069
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 36/173 (20%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN--------LDP-----ATEHQGPIQDE 79
+++V+ATD+D G+ + Y ++ N Y + ++P E+ I+ +
Sbjct: 479 ILRVQATDQDQGQNAALHYSIVSGNLKGQFYLHSLSGGLDVINPLDYEAIREYTLRIKAQ 538
Query: 80 GG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
G ++S+ VN++V D+ND P F S P++ +V E G +V + A DAD G+N
Sbjct: 539 DGGRPPLINSSGLVNVQVLDVNDNAPIFVSSPFQAAVLENVPLGHSVLHIQAIDADSGEN 598
Query: 134 AVVYYSVP-----------------EDIPFVVDANTGDIRTNKALDYEKQQLY 169
A ++Y + + PF + ++G I LD E+ + Y
Sbjct: 599 ARLHYRLVDVAAGAGAAADHGLPARDGFPFQIHNSSGWITVCAELDREEAEHY 651
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 23/163 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-------------LDNNTDAASYFN-LDPATEHQGP 75
G +++++A D D G+ G + Y++ +D++T A S LD T+
Sbjct: 262 GTPVIELRAQDPDEGEAGRLTYQMEALFDERSIGFFHIDSDTGAISNSRPLDRETKDTHV 321
Query: 76 IQ----DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
++ D G S + + V+D ND +P F+ + Y +V E + G V + ATD
Sbjct: 322 LKVTAVDHGSPQRSGATYLTVTVSDTNDHSPVFEQVEYRETVRENLEVGYEVLTIRATDG 381
Query: 129 DEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
D NA + Y + E D F +D TG +RT +D E+ Y
Sbjct: 382 DAPSNANMRYRLLEGADGAFKIDPRTGVVRTRSVVDREEVAEY 424
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 28/187 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y R+ +G ++ + ATD+D+G+ + Y L D F + P T
Sbjct: 789 SSHYTVSVREDKPVGSSIATISATDEDTGENARITYVL----EDPVPQFGIHPDTGTLVT 844
Query: 71 ------EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E Q +D G S T ++ I + D ND P F Y+ SV E
Sbjct: 845 LMELDYEDQAAYTLAITARDNGIPQKSDTTSLEILIVDANDNAPRFLRDLYQGSVFEDAP 904
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
+V +V ATD D G N + Y+ D F ++ +G IRT + LD E +Y
Sbjct: 905 PSTSVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRENVAVYSL 964
Query: 172 RVFLISK 178
R + +
Sbjct: 965 RALAVDR 971
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 74/185 (40%), Gaps = 51/185 (27%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------------------------------- 53
LG +++ ++A D DSG+ + YRL
Sbjct: 581 LGHSVLHIQAIDADSGENARLHYRLVDVAAGAGAAADHGLPARDGFPFQIHNSSGWITVC 640
Query: 54 --LDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
LD F ++ A +H P +SS+A+V I V D+ND +P F YE +
Sbjct: 641 AELDREEAEHYSFGVE-AVDHGSP-----AMSSSASVAITVLDVNDNDPAFTQPVYELRL 694
Query: 112 PE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGD--IRTNKALDYEK 165
E G +V + A D D N+V+ Y + F + + +G I LDY++
Sbjct: 695 NEDAAVGSSVLTLRARDRDA--NSVITYQLSSGNTRNRFALSSQSGGGLITLALPLDYKQ 752
Query: 166 QQLYL 170
++ Y+
Sbjct: 753 ERQYV 757
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 99 NPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV-----PEDIPFV-VDAN 151
+P+FQ Y SVPE + G V + A D DEG+ + Y + I F +D++
Sbjct: 243 SPQFQLPSYHVSVPENEPAGTPVIELRAQDPDEGEAGRLTYQMEALFDERSIGFFHIDSD 302
Query: 152 TGDIRTNKALDYEKQQLYLERV 173
TG I ++ LD E + ++ +V
Sbjct: 303 TGAISNSRPLDRETKDTHVLKV 324
>gi|116110500|gb|ABJ74629.1| stan [Drosophila miranda]
gi|116110502|gb|ABJ74630.1| stan [Drosophila miranda]
gi|116110504|gb|ABJ74631.1| stan [Drosophila miranda]
gi|116110506|gb|ABJ74632.1| stan [Drosophila miranda]
gi|116110508|gb|ABJ74633.1| stan [Drosophila miranda]
gi|116110510|gb|ABJ74634.1| stan [Drosophila miranda]
gi|116110512|gb|ABJ74635.1| stan [Drosophila miranda]
gi|116110516|gb|ABJ74637.1| stan [Drosophila miranda]
gi|116110518|gb|ABJ74638.1| stan [Drosophila miranda]
gi|116110524|gb|ABJ74641.1| stan [Drosophila miranda]
gi|116110526|gb|ABJ74642.1| stan [Drosophila miranda]
gi|116110528|gb|ABJ74643.1| stan [Drosophila miranda]
gi|116110530|gb|ABJ74644.1| stan [Drosophila miranda]
gi|116110532|gb|ABJ74645.1| stan [Drosophila miranda]
gi|116110534|gb|ABJ74646.1| stan [Drosophila miranda]
Length = 549
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 66/132 (50%), Gaps = 21/132 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP----------------ATEH 72
+G +++QV A+D D G G ++Y L D + + S F +DP A H
Sbjct: 208 VGTSVIQVSASDPDIGLNGRIKYLLSDRDVEDGS-FAIDPTSGTVRTNKGLDRESVAVYH 266
Query: 73 QGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
I + G LSS+ V IR+ D+ND P F S VPE G VG +HA D
Sbjct: 267 LTAIAVDKGSPPLSSSVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDP 326
Query: 129 DEGQNAVVYYSV 140
DEG NAVV+YS+
Sbjct: 327 DEGVNAVVHYSI 338
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPATEH--- 72
Y A + +G T++ V ATD D G + Y L + N + F+++P T
Sbjct: 88 YSASVFEDAPVGTTVLVVSATDSDVGINAQITYSLNEESINGLGSPDPFSINPQTGAIVT 147
Query: 73 QGPIQDE-------------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
P+ E GG LS T V I VTD+ND P F++ Y+ S+ E
Sbjct: 148 NAPLDRETTSGYLLTVTAKDGGSPLLSDTTDVEISVTDVNDNAPVFKNPLYQSSILEDAL 207
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G +V +V A+D D G N + Y + ED F +D +G +RTNK LD E +Y
Sbjct: 208 VGTSVIQVSASDPDIGLNGRIKYLLSDRDVEDGSFAIDPTSGTVRTNKGLDRESVAVY 265
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG S TATV+I +TD N+ P F++ PY SV E G V V ATD+D G NA +
Sbjct: 59 DSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGINAQI 118
Query: 137 YYSVPEDI--------PFVVDANTGDIRTNKALDYEKQQLYLERV 173
YS+ E+ PF ++ TG I TN LD E YL V
Sbjct: 119 TYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTV 163
>gi|348503283|ref|XP_003439194.1| PREDICTED: cadherin-18-like [Oreochromis niloticus]
Length = 768
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 82/171 (47%), Gaps = 31/171 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------------EH 72
+G T+ QV ATD D FG +L+ + YF+++P T ++
Sbjct: 144 IGTTVAQVTATDADDPMFG-NNAKLIYSILQGEPYFSVEPKTGIIVTSWQNMDREAREQY 202
Query: 73 QGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHA 125
Q +Q + GG SS+ TV + +TD+ND P FQ Y F+VPE G +GR+ A
Sbjct: 203 QVVVQVKDMLGLSGGYSSSTTVTVSLTDVNDNGPTFQQHLYTFAVPENAAIGTTIGRIMA 262
Query: 126 TDADEGQNAVVYYSVP---EDIPFVVDAN----TGDIRTNKALDYEKQQLY 169
D D G NA + YS+ E+ F + + G I K LD+E ++ +
Sbjct: 263 EDGDTGINAKMTYSLEGELEESTFTIKTDPVTQEGVILLAKPLDFEVKRRF 313
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I V DIND P+FQ+ PY S+PE G V +V ATDAD+ G NA + YS+ + P
Sbjct: 117 ITVQDINDNVPQFQNEPYVSSIPEMCPIGTTVAQVTATDADDPMFGNNAKLIYSILQGEP 176
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F V+ TG I T+ + +D E ++ Y
Sbjct: 177 YFSVEPKTGIIVTSWQNMDREAREQY 202
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI- 144
TV + V D D+ P F S YE+ +PE G VG V A D D N + YSV +
Sbjct: 339 TVKVIVRD-EDEPPVFLSPVYEWKLPENAAVGTVVGSVSARDTDTVNNPI-RYSVDKRSD 396
Query: 145 ---PFVVDANTGDIRTNKALDYE 164
F +D N G I K+LD E
Sbjct: 397 TTKAFKIDPNNGTITVAKSLDRE 419
>gi|441611774|ref|XP_004088040.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Nomascus leucogenys]
Length = 4067
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 82/170 (48%), Gaps = 26/170 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGP 75
Y A R+ +++V ATD+D GLV Y ++ N+ +F +D T + P
Sbjct: 620 YVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRG--HFAIDSLTGEIQVVAP 677
Query: 76 I--------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ QD G ++T +I+V DIND P F S P++ SV E G
Sbjct: 678 LDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSVLENAPLG 737
Query: 118 LAVGRVHATDADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYE 164
+V + A DAD G+NA + YS V D PFV+++ TG + + LD E
Sbjct: 738 HSVIHIQAVDADHGENARLEYSLTGVAPDTPFVINSATGWVSVSGPLDRE 787
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 84/185 (45%), Gaps = 32/185 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPAT----- 70
Y R+ E G ++Q++ATD D+ + YR + AA+ F +DP +
Sbjct: 508 YRETLRENVEEGYPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLIST 567
Query: 71 ------EH------------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH QG Q+ G S+T V+I V D ND P+F Y V
Sbjct: 568 SGRVDREHMESYELVVEASDQG--QEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQVR 625
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
E + V RV ATD D+ N +V+Y++ F +D+ TG+I+ LD+E ++
Sbjct: 626 EDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDSLTGEIQVVAPLDFEAERE 685
Query: 169 YLERV 173
Y R+
Sbjct: 686 YALRI 690
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQG 74
+++Q+ ATD+D+ G V+Y N D F ++P + E
Sbjct: 998 SVLQISATDRDAHANGRVQY-TFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVYELTA 1056
Query: 75 PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G L + + + V D+ND P F + +E V E G V ++ A D DEG
Sbjct: 1057 YAVDRGVPPLRTPVNIQVMVQDVNDNAPVFPAEEFEVRVKENSIVGSVVAQITAVDPDEG 1116
Query: 132 QNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE +Q Y+
Sbjct: 1117 PNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQEYV 1158
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V+I +TD N P FQS Y SV E + G + + A+D D G+NA + Y + +++P
Sbjct: 863 VHINITDANTHRPVFQSAHYSVSVNEDRRVGSTIVVISASDDDVGENARITYLLEDNLPQ 922
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +DA++G I LDYE Q Y
Sbjct: 923 FRIDADSGAITLQAPLDYEDQVTY 946
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 29/180 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT------- 70
Y + + G +++V A D D+G+ G + Y L N+ + F++DP +
Sbjct: 400 YQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQSGLIRTAA 459
Query: 71 --------EH--QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
H + QD G LS+T V + V D ND +P F+ Y ++ E ++G
Sbjct: 460 ALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRENVEEG 519
Query: 118 LAVGRVHATDADEGQNAVVYY--------SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ ++ ATD D NA + Y F +D +G I T+ +D E + Y
Sbjct: 520 YPILQLRATDGDAPPNANLRYRFVGPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESY 579
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEH 72
S Y + +G T++ + A+D D G+ + Y L DN F +D A
Sbjct: 879 SAHYSVSVNEDRRVGSTIVVISASDDDVGENARITYLLEDN----LPQFRIDADSGAITL 934
Query: 73 QGPIQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQD 116
Q P+ E ++ T + R V D+ND P+F + Y V E
Sbjct: 935 QAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSEDAP 994
Query: 117 GL-AVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ++ ATD D N V Y+ D F ++ +G +RT + LD E +Y
Sbjct: 995 PFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDREAVSVY 1052
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 99 NPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDAN 151
+P+F Y+ VPE + G AV RV A D D G+ + YS+ + F +D
Sbjct: 392 HPQFPQYNYQTLVPENEAAGTAVLRVVAQDPDAGEAGRLVYSLAALMNSRSLELFSIDPQ 451
Query: 152 TGDIRTNKALDYEKQQLYLERV 173
+G IRT ALD E + + RV
Sbjct: 452 SGLIRTAAALDRESMERHYLRV 473
>gi|403256580|ref|XP_003920947.1| PREDICTED: uncharacterized protein LOC101030360 [Saimiri boliviensis
boliviensis]
Length = 1858
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 19/171 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY + +G +++V ATD D+G G + Y L + + F ++P T
Sbjct: 915 FYRVQISEDSPIGFLVVKVSATDVDTGVNGEISYSLFQASDEIGKTFKINPLTGEIELKK 974
Query: 71 ----------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
E +D G S TV I+V D+ND PE + VPE V
Sbjct: 975 QLDFEKLQSYEVNVEARDAGTFSGKCTVLIQVMDVNDHAPEVTMSAFTSPVPENAPETVV 1034
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDA--NTGDIRTNKALDYEKQQLY 169
+D D +N V S+PED+PF++ + N + T + LD E + Y
Sbjct: 1035 ALFSVSDLDSEENGKVSCSIPEDLPFLLKSVGNFYTLLTERPLDRESRDEY 1085
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 21/174 (12%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
SL+ + DK +G ++ + A D D+G G + Y + D F ++P +
Sbjct: 1545 SLYEVQVPEDK-PIGSWIVTISAKDLDAGNHGKISYTFFHASEDVRKTFEINPMSGEVNL 1603
Query: 73 QGPI--------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
+ P+ D GGLS T+ ++V DIND PE +PE
Sbjct: 1604 RSPLDFEAIQSYTINIQATDGGGLSEKCTLLVKVMDINDNPPEVTMSSITKRIPENASET 1663
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIPFVVD---ANTGDIRTNKALDYEKQQLY 169
V D D N + S+ +++PF++ N I + KALD E + Y
Sbjct: 1664 LVALFSVLDQDSEDNGRMICSIQDNLPFILKPTFKNFFTIVSEKALDRESRAEY 1717
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 68/172 (39%), Gaps = 20/172 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL----------- 66
FY + LG ++ V A D DSG G + Y + D F +
Sbjct: 246 FYEVEILENSILGSLVVTVSAWDLDSGTNGELSYTFSHASEDIHKTFEIHQKSGEITLTA 305
Query: 67 ----DPATEHQGPIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
+ + IQ D GGL +TV I+V D+ND PE +PE V
Sbjct: 306 PLDFESIESYSMIIQATDGGGLFGKSTVRIQVMDVNDNAPEITVSSITSPIPENTPETVV 365
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDA---NTGDIRTNKALDYEKQQLY 169
D D G N + S+ ED+PFV+ + N + T + LD E + Y
Sbjct: 366 MVFSIRDRDSGDNGKMTCSISEDLPFVLKSLVENYYTLETERPLDRESRAEY 417
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
S TA V I + D+ND PEF+ Y + E G V +V ATD D G N + YS+
Sbjct: 892 SGTAQVYIEILDVNDNAPEFEQPFYRVQISEDSPIGFLVVKVSATDVDTGVNGEISYSLF 951
Query: 141 --PEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
++I F ++ TG+I K LD+EK Q Y
Sbjct: 952 QASDEIGKTFKINPLTGEIELKKQLDFEKLQSY 984
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS-- 139
S T V I+V DIND PEF YE VPE + G + + A D D G + + Y+
Sbjct: 1523 SGTTLVLIQVLDINDNAPEFPQSLYEVQVPEDKPIGSWIVTISAKDLDAGNHGKISYTFF 1582
Query: 140 -VPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
ED+ F ++ +G++ LD+E Q Y
Sbjct: 1583 HASEDVRKTFEINPMSGEVNLRSPLDFEAIQSY 1615
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVH-ATDADEGQNAVVYYSVPEDIPF 146
+ ++V DIND +P F +PE AV + A D+D G NAV Y++ + F
Sbjct: 119 IELQVRDINDHSPVFLEKEMLLEIPENSPVGAVFLLESAKDSDVGVNAVKSYTISPNSHF 178
Query: 147 VVDANTG-------DIRTNKALDYEKQ 166
+ ++ +KALDYE+Q
Sbjct: 179 HIKMRVNPDNRKYPELVLDKALDYEEQ 205
>gi|116110514|gb|ABJ74636.1| stan [Drosophila miranda]
Length = 549
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 66/132 (50%), Gaps = 21/132 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP----------------ATEH 72
+G +++QV A+D D G G ++Y L D + + S F +DP A H
Sbjct: 208 VGTSVIQVSASDPDIGLNGRIKYLLSDRDVEDGS-FAIDPTSGTVRTNKGLDRESVAVYH 266
Query: 73 QGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
I + G LSS+ V IR+ D+ND P F S VPE G VG +HA D
Sbjct: 267 LTAIAVDKGSPPLSSSVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDP 326
Query: 129 DEGQNAVVYYSV 140
DEG NAVV+YS+
Sbjct: 327 DEGVNAVVHYSI 338
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPATEH--- 72
Y A + +G T++ V ATD D G + Y L + N + F+++P T
Sbjct: 88 YSASVFEDAPVGTTVLVVSATDSDVGINAQITYSLNEESINGLGSPDPFSINPQTGAIVT 147
Query: 73 QGPIQDE-------------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
P+ E GG LS T V I VTD+ND P F++ Y+ S+ E
Sbjct: 148 NAPLDRETTSGYLLTVTAKDGGSPLLSDTTDVEISVTDVNDNAPVFKNPLYQSSILEDAL 207
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G +V +V A+D D G N + Y + ED F +D +G +RTNK LD E +Y
Sbjct: 208 VGTSVIQVSASDPDIGLNGRIKYLLSDRDVEDGSFAIDPTSGTVRTNKGLDRESVAVY 265
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG S TATV+I +TD N+ P F++ PY SV E G V V ATD+D G NA +
Sbjct: 59 DSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGINAQI 118
Query: 137 YYSVPEDI--------PFVVDANTGDIRTNKALDYEKQQLYLERV 173
YS+ E+ PF ++ TG I TN LD E YL V
Sbjct: 119 TYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTV 163
>gi|116110520|gb|ABJ74639.1| stan [Drosophila miranda]
Length = 549
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 66/132 (50%), Gaps = 21/132 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP----------------ATEH 72
+G +++QV A+D D G G ++Y L D + + S F +DP A H
Sbjct: 208 VGTSVIQVSASDPDIGLNGRIKYLLSDRDVEDGS-FAIDPTSGTVRTNKGLDRESVAVYH 266
Query: 73 QGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
I + G LSS+ V IR+ D+ND P F S VPE G VG +HA D
Sbjct: 267 LTAIAVDKGSPPLSSSVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDP 326
Query: 129 DEGQNAVVYYSV 140
DEG NAVV+YS+
Sbjct: 327 DEGVNAVVHYSI 338
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPATEH--- 72
Y A + +G T++ V ATD D G + Y L + N + F+++P T
Sbjct: 88 YSASVFEDAPVGTTVLVVSATDSDVGINAQITYSLNEESINGLGSPDPFSINPQTGAIVT 147
Query: 73 QGPIQDE-------------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
P+ E GG LS T V I VTD+ND P F++ Y+ S+ E
Sbjct: 148 NAPLDRETASGYLLTVTAKDGGSPLLSDTTDVEISVTDVNDNAPVFKNPLYQSSILEDAL 207
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G +V +V A+D D G N + Y + ED F +D +G +RTNK LD E +Y
Sbjct: 208 VGTSVIQVSASDPDIGLNGRIKYLLSDRDVEDGSFAIDPTSGTVRTNKGLDRESVAVY 265
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG S TATV+I +TD N+ P F++ PY SV E G V V ATD+D G NA +
Sbjct: 59 DSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGINAQI 118
Query: 137 YYSVPEDI--------PFVVDANTGDIRTNKALDYEKQQLYLERV 173
YS+ E+ PF ++ TG I TN LD E YL V
Sbjct: 119 TYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETASGYLLTV 163
>gi|328710951|ref|XP_003244410.1| PREDICTED: protocadherin-like wing polarity protein stan-like isoform
2 [Acyrthosiphon pisum]
Length = 3165
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 87/192 (45%), Gaps = 28/192 (14%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG 74
D+ Y A + +G T++ V ATD D G+ L+ Y L DA+ + G
Sbjct: 827 DNAPYTASIYEDAPVGSTVLVVSATDGDVGQNALITYSLASGYGDASEF----TINAQSG 882
Query: 75 PI-------------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
I +GG LS T V I +TDIND P+F + Y SV
Sbjct: 883 AIVTTKALDREVQSGYLLTVTARDGGNPPLSDTTDVEISITDINDNAPQFFNASYYGSVS 942
Query: 113 E-GQDGLAVGRVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYL 170
E G +V +V A+DAD G N + Y++ + + FV+D +G +RT +LD E Y
Sbjct: 943 EDALTGTSVLQVSASDADSGLNGRIKYALDDGVEAFVIDPTSGILRTAASLDRESIPQYN 1002
Query: 171 ERVFLISKFATS 182
VF I K + S
Sbjct: 1003 IHVFAIDKGSPS 1014
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GGLS TAT+ + VTD N+ P F + PY S+ E G V V ATD D GQNA++
Sbjct: 802 DSGGLSDTATIYVNVTDANNFAPIFDNAPYTASIYEDAPVGSTVLVVSATDGDVGQNALI 861
Query: 137 YYSVPEDI----PFVVDANTGDIRTNKALDYEKQQLYLERV 173
YS+ F ++A +G I T KALD E Q YL V
Sbjct: 862 TYSLASGYGDASEFTINAQSGAIVTTKALDREVQSGYLLTV 902
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 70/144 (48%), Gaps = 27/144 (18%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------ 71
+YG+++ D G +++QV A+D DSG G ++Y L D F +DP +
Sbjct: 937 YYGSVSEDALT-GTSVLQVSASDADSGLNGRIKYAL----DDGVEAFVIDPTSGILRTAA 991
Query: 72 ------------HQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD- 116
H I D+G LS+ V IR+ D+ND P F+S +PE
Sbjct: 992 SLDRESIPQYNIHVFAI-DKGSPSLSTAVPVTIRIEDVNDSPPVFESDKLVMYIPENSPI 1050
Query: 117 GLAVGRVHATDADEGQNAVVYYSV 140
G VG ++A D DEG NA+V YS+
Sbjct: 1051 GSTVGELYAKDPDEGPNAIVQYSI 1074
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 71/163 (43%), Gaps = 31/163 (19%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-----------------QD 78
+KATD D G +V Y ++ NT F++D + QD
Sbjct: 529 IKATDADQGLNAVVRYAIIGGNTQGQ--FSIDSQNGEVSLVKSLDYEAMRSYRLMIRAQD 586
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAV 135
G S+T + + V D+ND P F + ++ SV E G ++ RV A DADEG+NA
Sbjct: 587 GGNPSRSNTTQLLVNVKDVNDNPPRFYTSLFQESVLENVAVGYSIVRVQAYDADEGENAA 646
Query: 136 VYYSV---------PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ Y + E++P VD +G + T LD E Y
Sbjct: 647 LKYRIFPRDFEGTLAENLPITVDEKSGWVYTTHLLDRETNPKY 689
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 81/191 (42%), Gaps = 37/191 (19%)
Query: 14 SDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-----NTDAASYFNLD- 67
S S Y A R+ +G T++ ++ATD D G +EY + N+ A F +D
Sbjct: 390 SASGMYEASVRESVSVGTTIITIRATDLDIGVNSQIEYSIESISGGGINSSADETFGIDL 449
Query: 68 -----------------------PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQS 104
A++ P S+ A++ ++V D ND P+F
Sbjct: 450 RSGVVSVRRNLDREVCEVYTVMVKASDQAAPPSPR--RSAIASLVVKVLDDNDNYPQFSE 507
Query: 105 LPYEFSVPEG---QDGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTN 158
Y +V E + + ATDAD+G NAVV Y++ F +D+ G++
Sbjct: 508 RAYTANVAEDLNPNQRPVISTIKATDADQGLNAVVRYAIIGGNTQGQFSIDSQNGEVSLV 567
Query: 159 KALDYEKQQLY 169
K+LDYE + Y
Sbjct: 568 KSLDYEAMRSY 578
Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 13/100 (13%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLP--YEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS 139
++T T+ + V D ND +P F+S YE SV E G + + ATD D G N+ + YS
Sbjct: 369 TATTTLQVNVVDANDHSPVFESASGMYEASVRESVSVGTTIITIRATDLDIGVNSQIEYS 428
Query: 140 VPE----------DIPFVVDANTGDIRTNKALDYEKQQLY 169
+ D F +D +G + + LD E ++Y
Sbjct: 429 IESISGGGINSSADETFGIDLRSGVVSVRRNLDREVCEVY 468
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 36/182 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL---------------------D 67
+G ++++V+A D D G+ ++YR+ + + NL +
Sbjct: 627 VGYSIVRVQAYDADEGENAALKYRIFPRDFEGTLAENLPITVDEKSGWVYTTHLLDRETN 686
Query: 68 PATEHQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
P + Q +D G S+TA+V + + D+ND P F Y+ + E G + V
Sbjct: 687 PKYQFQVVAEDGGDPPKSATASVVVTIQDVNDNEPIFHPKQYDVVISEDSPPGTPLTTVM 746
Query: 125 ATDADEGQNAVVYYSVPED-----IPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKF 179
ATD DE N ++Y + + G + + LDY++ E+ F++S
Sbjct: 747 ATDPDE--NPRLHYEIVSGNLRGRFAIATHSGKGLVTVAQPLDYKQ-----EKRFILSVT 799
Query: 180 AT 181
AT
Sbjct: 800 AT 801
>gi|156371437|ref|XP_001628770.1| predicted protein [Nematostella vectensis]
gi|156215755|gb|EDO36707.1| predicted protein [Nematostella vectensis]
Length = 470
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 81/176 (46%), Gaps = 29/176 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH------ 72
Y ++ + + ++QV A D DSG V Y ++D N S F++DP T
Sbjct: 60 YSVAISEESWVRLPVLQVTAVDMDSGSNSQVTYSIVDGN----SSFSIDPNTGQIIVHRT 115
Query: 73 -----------QGPIQDEG--GLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QD 116
+ +D G L S A V I +TD ND NP F Y FS+ E
Sbjct: 116 LDFEVTRSFILRVQARDNGKPALVSRDYAYVTINITDENDNNPVFDKRSYNFSITEDVAK 175
Query: 117 GLAVGRVHATDADEGQNAVVYYSVP-EDI--PFVVDANTGDIRTNKALDYEKQQLY 169
G G V A DAD G+NA + YS+P ED+ F VD TG++ +D E+ +Y
Sbjct: 176 GTVFGFVRANDADSGKNAKLSYSIPDEDVRKTFAVDEITGNLSVVGDIDRERTGIY 231
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVY 137
+G + +++ + DIND+ P F Y ++ E L V +V A D D G N+ V
Sbjct: 32 DGKFQAFLEIDVHIQDINDQYPVFSPQNYSVAISEESWVRLPVLQVTAVDMDSGSNSQVT 91
Query: 138 YSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
YS+ + + F +D NTG I ++ LD+E + ++ RV
Sbjct: 92 YSIVDGNSSFSIDPNTGQIIVHRTLDFEVTRSFILRV 128
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 73/172 (42%), Gaps = 28/172 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----EHQ 73
Y + +G ++ V A D+D G L+ Y + N + S F+++ T
Sbjct: 270 YTVRISEGTSVGTKIVWVHAHDEDIGPNALITYHIDSGNKE--SIFDIEDGTIVLNGTLD 327
Query: 74 GPIQDEGGLSSTATVN--------------IRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
+ D+ L AT N I + DIND PEF + Y ++ E G
Sbjct: 328 REVMDQYTLGILATDNGEPPQLSRDPAIVVITIEDINDNYPEFNASVYSVNISEDTSIGT 387
Query: 119 AVGRVHATDADEGQNAVVYY----SVPEDIPFVVDAN--TGDIRTNKALDYE 164
V V+A+D D G NA V Y S +DI V D N TG I T LD+E
Sbjct: 388 QVLSVYASDKDLGSNAHVQYFIIASANDDIKRVFDVNKTTGAISTTSNLDFE 439
>gi|195153499|ref|XP_002017663.1| GL17301 [Drosophila persimilis]
gi|194113459|gb|EDW35502.1| GL17301 [Drosophila persimilis]
Length = 2716
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 79/172 (45%), Gaps = 28/172 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP----------------ATEH 72
+G +++QV A+D D G G ++Y L D + + S F +DP A H
Sbjct: 1027 VGTSVIQVSASDPDIGLNGRIKYLLSDRDVEDGS-FVIDPTSGTVRTNKGLDRESVAVYH 1085
Query: 73 QGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
I + G LSS+ V IR+ D+ND P F S VPE G VG +HA D
Sbjct: 1086 LTAIAVDKGSPPLSSSVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDP 1145
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIR----TNKALDYEKQQLYLERV 173
DEG NAVV+YS+ + F + G R T LDYE + E V
Sbjct: 1146 DEGVNAVVHYSIIGGDDSNSFSLVTRPGSERAQLLTMTELDYESSRKRFELV 1197
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 83/178 (46%), Gaps = 27/178 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPATEH--- 72
Y A + +G T++ V ATD D G + Y L + N + F+++P T
Sbjct: 907 YSASVFEDAPVGTTVLVVSATDSDVGINAQITYSLNEESINGLGSPDPFSINPQTGAIVT 966
Query: 73 QGPIQDE-------------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
P+ E GG LS T V I VTD+ND P F++ Y+ S+ E
Sbjct: 967 NAPLDRETTSGYLLTVTAKDGGSPSLSDTTDVEISVTDVNDNAPVFKNPLYQSSILEDAL 1026
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G +V +V A+D D G N + Y + ED FV+D +G +RTNK LD E +Y
Sbjct: 1027 VGTSVIQVSASDPDIGLNGRIKYLLSDRDVEDGSFVIDPTSGTVRTNKGLDRESVAVY 1084
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 85/190 (44%), Gaps = 42/190 (22%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL------------------------- 53
+ A R+ +G T++ ++ATD+D GK +EY +
Sbjct: 474 FEASIREGATVGSTVITLRATDQDIGKNAEIEYGIETVTDGTGSTQDQELPIFRIDSRSG 533
Query: 54 -------LDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLP 106
LD T + SY L A++ + ++TA+V ++V D ND P+F
Sbjct: 534 VISTRSSLDRET-SDSYHLLVTASDMAAAQSERK--TATASVLVKVLDDNDNYPQFSERT 590
Query: 107 YEFSVPEGQDGLA----VGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNK 159
Y VPE Q G + V + ATDAD+G NA + Y++ F +D+ +GD+ K
Sbjct: 591 YTVQVPEDQWGGSEDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSIDSMSGDVSLVK 650
Query: 160 ALDYEKQQLY 169
LDYE + Y
Sbjct: 651 PLDYESVRSY 660
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 74/161 (45%), Gaps = 25/161 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------- 76
T+ ++ATD D G + Y ++ NT S F++D + +
Sbjct: 607 TVAHIRATDADQGNNAAIRYAIIGGNTQ--SQFSIDSMSGDVSLVKPLDYESVRSYRLVI 664
Query: 77 --QDEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
QD G S + T + V D ND P F + ++ SV E G + RV A D+DEG
Sbjct: 665 RAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESVLENVPVGYNIIRVQAYDSDEG 724
Query: 132 QNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
NA + YS+ E + P VD TG ++T K LD E+Q +
Sbjct: 725 PNAEITYSISERDDNFPLAVDPRTGWVQTIKQLDREEQSRF 765
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 55/102 (53%), Gaps = 9/102 (8%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG S TATV+I +TD N+ P F++ PY SV E G V V ATD+D G NA +
Sbjct: 878 DSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGINAQI 937
Query: 137 YYSVPEDI--------PFVVDANTGDIRTNKALDYEKQQLYL 170
YS+ E+ PF ++ TG I TN LD E YL
Sbjct: 938 TYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYL 979
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
S T T+ + V D ND +P F++ +E S+ EG G V + ATD D G+NA + Y +
Sbjct: 450 SGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGSTVITLRATDQDIGKNAEIEYGIE 509
Query: 142 -----------EDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+++P F +D+ +G I T +LD E Y
Sbjct: 510 TVTDGTGSTQDQELPIFRIDSRSGVISTRSSLDRETSDSY 549
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 29/167 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP-- 75
+G +++V+A D D G + Y + + + + +DP T E Q
Sbjct: 709 VGYNIIRVQAYDSDEGPNAEITYSISERDDNFP--LAVDPRTGWVQTIKQLDREEQSRFA 766
Query: 76 ---IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDA 128
+ +GG+ S++++V I V D+ND +P F YE +V E Q G V V ATD
Sbjct: 767 FQVVAKDGGVPPKSASSSVVITVQDVNDNDPTFNPKYYEANVGEDQPQGTPVTTVTATDP 826
Query: 129 DEGQNAVVYYSVPEDIP---FVVDANTGD--IRTNKALDYEKQQLYL 170
DE ++ ++Y + F + + G I ++LDY++++ +L
Sbjct: 827 DE--DSRLHYEITTGNTRGRFAITSQNGRGLITIAQSLDYKQEKRFL 871
>gi|116110522|gb|ABJ74640.1| stan [Drosophila miranda]
Length = 549
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 66/132 (50%), Gaps = 21/132 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP----------------ATEH 72
+G +++QV A+D D G G ++Y L D + + S F +DP A H
Sbjct: 208 VGTSVIQVSASDPDIGLNGRIKYLLSDRDVEDGS-FAIDPTSGTVRTNKGLDRESVAVYH 266
Query: 73 QGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
I + G LSS+ V IR+ D+ND P F S VPE G VG +HA D
Sbjct: 267 LTAIAVDKGSPPLSSSVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDP 326
Query: 129 DEGQNAVVYYSV 140
DEG NAVV+YS+
Sbjct: 327 DEGVNAVVHYSI 338
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPATEH--- 72
Y A + +G T++ V ATD D G + Y L + N + F+++P T
Sbjct: 88 YSASVFEDAPVGTTVLVVSATDSDVGINAQITYSLNEESINGLGSPDPFSINPQTGAIVT 147
Query: 73 QGPIQDE-------------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
P+ E GG LS T V I VTD+ND P F++ Y+ S+ E
Sbjct: 148 NAPLDRETTSGYLLTVTAKDGGSPLLSDTTDVEISVTDVNDNAPVFKNPLYQSSILEDAL 207
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G +V +V A+D D G N + Y + ED F +D +G +RTNK LD E +Y
Sbjct: 208 VGTSVIQVSASDPDIGLNGRIKYLLSDRDVEDGSFAIDPTSGTVRTNKGLDRESVAVY 265
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG S TATV+I +TD N+ P F++ PY SV E G V V ATD+D G NA +
Sbjct: 59 DSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGINAQI 118
Query: 137 YYSVPEDI--------PFVVDANTGDIRTNKALDYEKQQLYLERV 173
YS+ E+ PF ++ TG I TN LD E YL V
Sbjct: 119 TYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTV 163
>gi|321458298|gb|EFX69368.1| hypothetical protein DAPPUDRAFT_329129 [Daphnia pulex]
Length = 5030
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 86/173 (49%), Gaps = 18/173 (10%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT----------DAASYF 64
DS + + + + L V ++ V+A D DS + V Y + D + + +
Sbjct: 2298 DSPYIAYVMEENNRLPVPIITVQAHDADSPPYNRVRYLIKDGDKGLFRVNGTTGEISVLR 2357
Query: 65 NLDPATEHQGPI----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDG 117
+LD T+ + I D G L+ T TV I V DIND +PEF Y V E G G
Sbjct: 2358 SLDRETQSRYEIIVVAMDSGVPVLTGTGTVLIFVEDINDHSPEFSQSQYRSDVVENGPIG 2417
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLY 169
L+V +V A D D G+NA++ Y + D F +D++TG+I T LD E++ Y
Sbjct: 2418 LSVTKVSAFDNDSGENALIRYQLKNDKDKFRIDSSTGEIFTQTKLDREERSKY 2470
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 84/182 (46%), Gaps = 35/182 (19%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
+L Y + ++ LG ++ V A+D DSG G+V Y ++ N + + F +DP T G
Sbjct: 3151 ALSYQIIVQENEPLGSIIVSVTASDNDSGPNGVVHYAIVSGNEE--NKFLIDPNT---GD 3205
Query: 76 IQDEGGLS----------------------STATVNIRVTDINDKNPEFQSLPYEFSVPE 113
I L +TAT+ + +TD+ND P F Y+ V E
Sbjct: 3206 ISVANTLDFDTLPKFTLNITATDMGFEPKLATATLTVLLTDVNDNPPRFNQSHYDGFVRE 3265
Query: 114 G--QDGLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQ 167
D L V + A DAD +N ++ YS+ +D F +D+ TG + T + D+E++
Sbjct: 3266 NLPPDTL-VMDLEAFDADSAKNGIIQYSIIGGNGKDF-FTIDSETGVVTTKSSFDFEEKN 3323
Query: 168 LY 169
Y
Sbjct: 3324 YY 3325
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 64/140 (45%), Gaps = 14/140 (10%)
Query: 38 ATDKDSGKFGLVEY----RLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVT 93
+ D SG + Y RLL T Y L+ G I+ L A +++ +
Sbjct: 1170 SIDPKSGFIKTLRYFDRERLL--QTTGQDYIVLEAVVSDNGVIR----LRDRARIHVFIL 1223
Query: 94 DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVD 149
D+ND P F +PY+ V EG V RV ATDAD+ N ++Y + E D F +D
Sbjct: 1224 DVNDNAPAFSRVPYKTQVSEGAAVDTQVFRVVATDADDQLNGGIFYYITEGNGDHKFRID 1283
Query: 150 ANTGDIRTNKALDYEKQQLY 169
+G I N+ALD E Y
Sbjct: 1284 EASGQIVLNRALDRETSDRY 1303
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 80/162 (49%), Gaps = 22/162 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRL-----LDN--NTDAAS---YFNLDPATEHQG------PI 76
++ V ATD DSG+ GLV Y+L LDN + DA S Y N+ E G
Sbjct: 2739 VLTVHATDLDSGRNGLVRYQLRNSGDLDNAFSVDAESGKIYTNVKLDREDVGHYVLIVEA 2798
Query: 77 QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
D+G S TATV++ V D ND P F L + +V E G V +V ++D D G N
Sbjct: 2799 VDQGAPQRSGTATVSVTVADKNDNPPRFTRL-FSVNVTENAAIGTFVIQVTSSDRDIGVN 2857
Query: 134 AVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERV 173
A YS E+ F +D +G++ +D E ++ YL +V
Sbjct: 2858 ANATYSFTENPTGKFRIDPVSGNVTVAGVIDRESKEEYLLKV 2899
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 73/162 (45%), Gaps = 25/162 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA---------------TEHQ 73
+G + V ATD D K G V Y L+ + F L+ A ++++
Sbjct: 1792 IGQPITTVTATDLD--KTGTVVYTLVSGDD---GKFTLESAKGILTLRDNLDREFQSQYK 1846
Query: 74 GPIQDEGGLSSTATV-NIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
I+ + G T TV I+V D ND +P F Y F +PE G VG V A D DEG
Sbjct: 1847 LTIKADDGEQFTETVLIIKVIDTNDNSPTFSEAAYSFDIPEDTGRGAFVGAVVANDMDEG 1906
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYL 170
NA V Y+V D F ++ +G LDYE+ Q Y+
Sbjct: 1907 INAQVSYTVLSDWGNDVFSLNPQSGVFTLTSRLDYEQVQHYI 1948
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 20/162 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL------------LDNNTDAASYFNLDPATEHQGPI 76
+ +M +KA D+D G+ +EY L +D ++ + + + +
Sbjct: 2102 INTVVMAIKAIDRDEGRNSYIEYSLAPIDDGCFTLGPVDGLLRVSALLDRESRANYTLHV 2161
Query: 77 Q--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G S + V +RV D ND +P F Y SV E GL+V +V ATD DEG
Sbjct: 2162 MAYDRGLPSRSQSLDVLVRVLDENDNSPLFDPKVYSASVSENATIGLSVLQVSATDLDEG 2221
Query: 132 QNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
N V Y++ + F + ++G IR K L++E++ Y+
Sbjct: 2222 LNGRVRYTIVGGDINFDFHIGEDSGIIRVAKNLNFERRSQYV 2263
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 76/176 (43%), Gaps = 21/176 (11%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL--DNNTD-----------AA 61
D Y A + +G++++QV ATD D G G V Y ++ D N D A
Sbjct: 2192 DPKVYSASVSENATIGLSVLQVSATDLDEGLNGRVRYTIVGGDINFDFHIGEDSGIIRVA 2251
Query: 62 SYFNLDPATEHQGPIQDEGGLS----STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG 117
N + +++ IQ E + TAT I + DIND P F PY V E +
Sbjct: 2252 KNLNFERRSQYVLTIQVEDSGNDVRYDTATATITIMDINDNAPIFLDSPYIAYVMEENNR 2311
Query: 118 LAVG--RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
L V V A DAD V Y + + F V+ TG+I ++LD E Q Y
Sbjct: 2312 LPVPIITVQAHDADSPPYNRVRYLIKDGDKGLFRVNGTTGEISVLRSLDRETQSRY 2367
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 32/158 (20%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNN--------------------TDAASYFNLDPATEH 72
+ A D+D G G V Y + + N +A Y+ L E
Sbjct: 1038 FFALSAMDRDKGANGRVSYFISEGNEAVKFGIFPDGMLYVKSPLDREAKDYYALTVVAE- 1096
Query: 73 QGPIQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDA 128
+GG+ SS+ +V I + D ND P+F + + F +PE + + VGR+ ATD
Sbjct: 1097 ------DGGMPPRSSSVSVTIHIIDENDNPPKFNNETFSFYIPENEAPDSYVGRLTATDR 1150
Query: 129 DEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEK 165
D G+NA + +S+ F +D +G I+T + D E+
Sbjct: 1151 DVGRNAELTFSIATSQSDFSIDPKSGFIKTLRYFDRER 1188
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 24/156 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGPIQDE------ 79
+G ++QV ++D+D G Y +N T F +DP + + G I E
Sbjct: 2840 IGTFVIQVTSSDRDIGVNANATYSFTENPT---GKFRIDPVSGNVTVAGVIDRESKEEYL 2896
Query: 80 -------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD-E 130
G + + I V D ND PEF+ Y F+ E Q +A VG+V A D D +
Sbjct: 2897 LKVSAVDGSWRAETPLTITVQDQNDNAPEFEHSFYSFNFAELQRNVAFVGQVTAADRDKQ 2956
Query: 131 GQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYE 164
G NA++ YS+ P + F +D +G+I + + + Y+
Sbjct: 2957 GPNAMITYSIKHPSEF-FSIDLTSGEILSKQTVRYK 2991
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 71/163 (43%), Gaps = 28/163 (17%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNT-------------DAASYFNLDPATEHQGPIQ----D 78
V AT +G G ++Y + NT + + + +T+++ I+ D
Sbjct: 2631 VIATSPKTGAAGEIQYGIAGGNTGDVFQINSKTGEVSIGTGLDYEISTQYELWIEARDSD 2690
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-------DGLAVGRVHATDADEG 131
+ L+S + I VTD ND +P F Y S+ E Q V VHATD D G
Sbjct: 2691 DISLASVTRLLINVTDFNDNSPIFHHAIYYASILEEQFPPSPLMSSQLVLTVHATDLDSG 2750
Query: 132 QNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLYL 170
+N +V Y + D F VDA +G I TN LD E Y+
Sbjct: 2751 RNGLVRYQLRNSGDLDNAFSVDAESGKIYTNVKLDREDVGHYV 2793
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQN 133
QD G LSST TV V D+ND P F + Y + E G +V V ATD D G N
Sbjct: 1954 QDTGRPSLSSTVTVYFNVLDLNDNAPLFDPMSYSDELYENITIGSSVITVSATDQDSGDN 2013
Query: 134 AVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ YS+ E+ F + N G I T+++LD E Q LY
Sbjct: 2014 GKLVYSIIGGNENEQFRITQN-GTIMTSQSLDRETQSLY 2051
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 73/169 (43%), Gaps = 25/169 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNN--------------------TDAASYFNL-D 67
+G +++ V ATD+DSG G + Y ++ N + S +NL
Sbjct: 1996 IGSSVITVSATDQDSGDNGKLVYSIIGGNENEQFRITQNGTIMTSQSLDRETQSLYNLVI 2055
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATD 127
AT+ P E LSST V I + D+ND PEF S + V + A D
Sbjct: 2056 MATDQAKP--PEKRLSSTVQVTIILKDVNDMAPEFVSSNETAVMENIPINTVVMAIKAID 2113
Query: 128 ADEGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
DEG+N+ + YS+ +D F + G +R + LD E + Y V
Sbjct: 2114 RDEGRNSYIEYSLAPIDDGCFTLGPVDGLLRVSALLDRESRANYTLHVM 2162
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 74/168 (44%), Gaps = 31/168 (18%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAA--SYFNLDPAT-----------------EHQGPI 76
+ A D D G G V Y + D+ D F +D +T E +
Sbjct: 611 LTAVDHDQGTNGSVSY-MFDSQMDQRYPGIFAIDASTGRVTTRTKLDREVIPEYEIKVVA 669
Query: 77 QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-------QDGLAVGRVHATD 127
+D+G LSSTAT+ +RV D ND +PEF Y +V E ++ V V A D
Sbjct: 670 RDQGNPPLSSTATIVLRVLDANDNSPEFYPQQYLVAVSETLQVVKIYKEPEVVATVTAMD 729
Query: 128 ADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
DE +NA V YS+ + F V+ TG IR L+ ++ Y +V
Sbjct: 730 EDEDENAQVTYSIKSGGEGVFDVEEQTGIIRLRSPLNSARKAQYKLKV 777
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNA-VVYYSVPEDIP 145
VNI + D+ND P F Y S+ E G V +V ATD D G+NA V YY +
Sbjct: 245 VNITIVDVNDNPPIFDHSDYVVSLNESVPPGTHVMQVTATDNDAGENARVTYYISESETQ 304
Query: 146 FVVDANTGDIRTNKALDYEK 165
F VDA TG I T + L+ ++
Sbjct: 305 FAVDAETGVITTTEQLNCQR 324
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 24/170 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y R+ +M ++A D DS K G+++Y ++ N +F +D T
Sbjct: 3259 YDGFVRENLPPDTLVMDLEAFDADSAKNGIIQYSIIGGN--GKDFFTIDSETGVVTTKSS 3316
Query: 71 ---EHQG-------PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
E + + + + V + +T N+ P+F ++F+V E G +
Sbjct: 3317 FDFEEKNYYELDVLASNPDSSMFGSTVVRVHITGRNEFFPKFVQPVFQFTVSESVPVGAS 3376
Query: 120 VGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQ 166
VG + ATD D G++ V+Y D F + TG I + LD E
Sbjct: 3377 VGIIQATDRDNGEDGEVFYLFVGSSNDRGFHITPETGVITVARPLDRESH 3426
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNA--VVYYS 139
+ T V+I + DIND P F+ + SV E + G +V + A DAD+ NA Y
Sbjct: 3552 TGTTEVHIVIQDINDNGPVFEPVHPVGSVFENEPPGTSVMILSAIDADQAPNAEPFTYTI 3611
Query: 140 VPEDIP--FVVDANTGDIRTNKALDYEK 165
V D FVVD +TG +RT LD E+
Sbjct: 3612 VGGDHKDYFVVDKDTGVLRTTNILDREE 3639
Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 69/161 (42%), Gaps = 27/161 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTD-------AASYFNLDPATEHQGP--------IQ 77
+ +V ATD D G + Y + + N D A+ L+ A + + +
Sbjct: 1251 VFRVVATDADDQLNGGIFYYITEGNGDHKFRIDEASGQIVLNRALDRETSDRYTLTIGAR 1310
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR----VHATDADEG 131
D G LS++ TV I V D ND PEF + S E L VG ATDAD G
Sbjct: 1311 DAGLPNLSTSTTVIIDVLDENDNAPEFMHSEAKISALE---TLPVGSELVTFQATDADLG 1367
Query: 132 QNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLY 169
N+ + +S+ F +D G + K LD+E Q+ Y
Sbjct: 1368 INSEIAFSIGAGNMHDTFRIDPQLGTLYLEKHLDFEMQRSY 1408
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 21 AMARDKHELGVTLMQVKATDKDS----GKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI 76
A+ R+ L V QV+++ K S +F + + + A + + + +Q I
Sbjct: 826 AIGREVGRLSVNNKQVQSSPKYSIIGGDQFKVFQIDEITGVLTTAKRIDREKQSHYQLLI 885
Query: 77 QDEGGLS-STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG-LAVGRVHATDADEGQNA 134
G S T +VN+ V D+ND P F V E + A D D G N+
Sbjct: 886 VARSGFSYGTVSVNVTVQDVNDNPPRFDKTRAVARVVENWPANHEIYLAKAEDLDTGNNS 945
Query: 135 VVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFAT 181
+ YS+ P ++ F + G I N+ L +E Q Y E + AT
Sbjct: 946 RITYSLTLNPHEL-FTISPTLGMIYLNRPLQHE--QFYFESSLTLEVTAT 992
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIP 145
I V D+ND P F+ Y + E G V + ATD D G N+ ++Y++ +
Sbjct: 471 IHVNDVNDHEPIFEKSEYSAVLSELVSVGSYVAGITATDEDTGINSNIFYAIVSGNDQQW 530
Query: 146 FVVDANTGDIRTNKALDYEKQQLYLERV 173
F +D +G I T+ LD E+Q R+
Sbjct: 531 FDIDMVSGLITTHHQLDREQQDTVELRI 558
Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 71/173 (41%), Gaps = 29/173 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA-----TEHQ 73
Y A+ + +G + + ATD+D+G + Y ++ N +F++D T HQ
Sbjct: 488 YSAVLSELVSVGSYVAGITATDEDTGINSNIFYAIVSGNDQ--QWFDIDMVSGLITTHHQ 545
Query: 74 ------------GPIQDEGGLSSTATVNIRVT--DINDKNPEF--QSLPYEFSVPEGQDG 117
+D G A +I++T D ND++P+F QSL
Sbjct: 546 LDREQQDTVELRISARDGGPNPRWAYTHIKITILDENDEHPQFVQQSLKQVNLSENTPPN 605
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYE 164
V + A D D+G N V Y + F +DA+TG + T LD E
Sbjct: 606 TLVALLTAVDHDQGTNGSVSYMFDSQMDQRYPGIFAIDASTGRVTTRTKLDRE 658
Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
AT+ P + +S+ V + V DIND P F S+ +P+G + G + +HA D
Sbjct: 1531 ATDQAEPASNR--ISAEKLVTVIVEDINDNAPTFTSVSAGL-LPKGAERGHEILHIHAAD 1587
Query: 128 ADEGQNAVVYYSV 140
AD N +V Y +
Sbjct: 1588 ADANTNGIVTYEM 1600
>gi|297293548|ref|XP_002804273.1| PREDICTED: protocadherin-23-like [Macaca mulatta]
Length = 3366
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 77/172 (44%), Gaps = 30/172 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN--NTDAASYFNLDPATEHQGPI 76
Y A + +G +QV A+D DSG +G +EY L D + +A F +DP H G I
Sbjct: 663 YNATIAEHAPVGHCFLQVTASDADSGLYGFIEYSLYDGFLSYEAPQAFRIDP---HDGRI 719
Query: 77 ---------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EG 114
+D GGLS+ A V + + D+ND +P F Y S+ E
Sbjct: 720 CVSQDIDRERDPATYDLLVKAKDGGGLSAQAFVRVDLEDVNDNHPVFNPSTYVTSISGET 779
Query: 115 QDGLAVGRVHATDADEGQNAVVYYS-VPEDIP--FVVDANTGDIRTNKALDY 163
Q G + V ATD D G V Y +P D+ F +D+ TG I L +
Sbjct: 780 QPGTEIINVLATDRDSGIYGTVAYELIPGDVSSLFTIDSTTGIIYLTSPLSH 831
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 76/162 (46%), Gaps = 31/162 (19%)
Query: 35 QVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ------ 77
++ A D D G+ G + Y LL + +F ++P T EH+G Q
Sbjct: 1207 KITAIDIDYGRNGQLLYFLLSD----GRFFKMNPNTGSXXXXXALDREHRGHHQMTVLVT 1262
Query: 78 DEGGLSSTAT--VNIRVTDINDKNPEF-QSLP---YEFSVPEGQD-GLAVGRVHATDADE 130
D G AT V + VTDIND P F Q LP V EGQ + V V A D DE
Sbjct: 1263 DRGSPPRNATMVVYVSVTDINDNRPFFPQCLPGKELHVKVLEGQPVKMLVTTVFAKDPDE 1322
Query: 131 GQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
G NA V YSV + F +DAN+G+IRT L Y+ + Y
Sbjct: 1323 GNNAEVIYSVSSEDSSEHFKIDANSGEIRTTTVLSYDFRPSY 1364
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 90/184 (48%), Gaps = 31/184 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA-------- 69
F A ++ +G + + A D D G+ G + Y +L N + A F LD +
Sbjct: 1618 FPIAHVKEDVTVGSLVHHIIAHDPDEGRNGKITYSILSGNENMA--FMLDESSGLLTTTC 1675
Query: 70 -------TEHQGPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
T+H + D+G LSS+ T+ I V D+ND+ P F+ YE SV E Q+ G
Sbjct: 1676 PLDYEMKTQHILIVLALDDGTPALSSSQTLTITVLDVNDEAPVFKQHLYEASVKENQNPG 1735
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLE 171
V RV A D D G N+ + + + +P F ++++TG++ T LD E Q+++
Sbjct: 1736 EFVTRVDALDRDSGVNSKLQFEI---MPGASFESFEINSDTGEVVTATMLDREVQEVFTL 1792
Query: 172 RVFL 175
RV +
Sbjct: 1793 RVLV 1796
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 71/159 (44%), Gaps = 30/159 (18%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL---------- 82
L V A+D D+G VEY ++D NTD YF ++ E G + L
Sbjct: 1842 LYTVLASDMDAGNNRAVEYHIIDGNTD--EYFAIN---EMSGELSTTRALDREQVSNFTL 1896
Query: 83 ------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDAD 129
SS + +RV D ND P F +L Y+FSV E + G V + A D D
Sbjct: 1897 AILCSDLGDPPRSSVIHLQVRVLDANDHTPSFPTLYYQFSVREDAEVGTVVFVLSAVDKD 1956
Query: 130 EGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQ 166
EG N Y + ++ F +D +G +RT+ LD E +
Sbjct: 1957 EGLNGQTEYFLTDEASGAFTIDPMSGTLRTSNTLDREAR 1995
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 29/180 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------- 68
+L+Y R+ E+G + + A DKD G G EY L D +A+ F +DP
Sbjct: 1930 TLYYQFSVREDAEVGTVVFVLSAVDKDEGLNGQTEYFLTD---EASGAFTIDPMSGTLRT 1986
Query: 69 ---------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYE-FSVP 112
A IQ G S+T + + VTD+ND +P + P++ F P
Sbjct: 1987 SNTLDREARSQHTFSAVARDCSIQ--GSRSTTVIIKVCVTDVNDNDPVLEQNPFDVFLSP 2044
Query: 113 EGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLE 171
+ V A D D G N V +S E F +D +TG+I+ + E ++L+
Sbjct: 2045 QSPTNQTTVIVRADDPDSGPNGTVVFSFAETQSMFSIDKHTGEIQFQQNPSSEYFPIWLQ 2104
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 77/162 (47%), Gaps = 31/162 (19%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ---- 77
++QV ATD DSG GL+EY +L N + A F +D + EH
Sbjct: 2256 VIQVFATDLDSGLNGLIEYSILSGNQEEA--FQIDALSGVITTKAILDYEHTSSYSLIVQ 2313
Query: 78 --DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD---GLAVGRVHATDADE 130
D+G LS+T + ++VTDIND P F LP E +V +D G+ V V D D
Sbjct: 2314 ATDKGMPRLSNTTIIKVQVTDINDNAPAF--LPSE-AVEIAEDSLPGVIVTHVSVHDVDL 2370
Query: 131 GQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+A ++ E P F +D NTG + K LD+E+ Y
Sbjct: 2371 -NSAFIFSFAKESNPGTKFAIDQNTGVVVLVKTLDFEEVTEY 2411
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 25/165 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNN--TDAASY----FNLDPATE--HQGPI------- 76
T+ + A D D+G +G + Y ++ + T SY F +DP T H I
Sbjct: 2782 TICSISALDFDAGPYGELTYSIISSCFLTHGMSYDHDLFLIDPLTGDIHAKQILDYENGN 2841
Query: 77 --------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
+D+G +++ V + + +++ P F Y F++PE +D +GRV A+D
Sbjct: 2842 KYCLTVQAKDKGDATASLVVWVDIEGVDEFEPIFTQDQYFFTLPEKNKDRQLIGRVEASD 2901
Query: 128 ADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEKQQLYLE 171
AD G + V+ YS+ PF V+ G+I +AL K QL E
Sbjct: 2902 ADAGIDGVILYSLGTSSPFFSVNKTNGNIYLIRALPLIKSQLNKE 2946
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
LSSTA ++I+V D+ND P F SL Y V EG G + V A D D G +A + Y +
Sbjct: 2640 LSSTAVISIQVLDVNDNPPNFSSLSYHTHVKEGTPLGSHITVVSANDRDTGSHAEIIYHI 2699
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEK 165
E F ++ NTG + K LDYE+
Sbjct: 2700 ISGNEKGNFYLEENTGVLYLVKPLDYEE 2727
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 20/168 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-----ATEH 72
Y A ++ G + +V A D+DSG +++ ++ + + N D AT
Sbjct: 1723 LYEASVKENQNPGEFVTRVDALDRDSGVNSKLQFEIMPGASFESFEINSDTGEVVTATML 1782
Query: 73 QGPIQD---------EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
+Q+ +GG LSST T+ V D ND PEF Y+ V E Q+ +
Sbjct: 1783 DREVQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEFIVSSYDIEVLENQEPEVL 1842
Query: 121 GRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEK 165
V A+D D G N V Y + + D F ++ +G++ T +ALD E+
Sbjct: 1843 YTVLASDMDAGNNRAVEYHIIDGNTDEYFAINEMSGELSTTRALDREQ 1890
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 21/172 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA---------------S 62
Y + + E G +++ VKA DS + L +Y + N D
Sbjct: 2138 LYKGLVTENCEAGTSIVTVKAFAPDSVQDSL-KYSIFSGNEDGVLSLCSKSGQLTVKEPK 2196
Query: 63 YFNLDPATEHQGPIQDEG-GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-V 120
+ + + E Q + E G + V + + D ND +P F+ Y+ SV EG+ A V
Sbjct: 2197 FLDFEVRNEVQLIVLAESSGHRAYCKVAVLIQDENDNSPRFEQSVYQASVSEGEFYNAHV 2256
Query: 121 GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ATD D G N ++ YS+ ++ F +DA +G I T LDYE Y
Sbjct: 2257 IQVFATDLDSGLNGLIEYSILSGNQEEAFQIDALSGVITTKAILDYEHTSSY 2308
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---PED 143
T I + D+ND NP F S P + G V + A D DEG+N + YS+ E+
Sbjct: 1600 TAQIVILDVNDHNPTFMSFPIAHVKEDVTVGSLVHHIIAHDPDEGRNGKITYSILSGNEN 1659
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLYL 170
+ F++D ++G + T LDYE + ++
Sbjct: 1660 MAFMLDESSGLLTTTCPLDYEMKTQHI 1686
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 18/110 (16%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEG--QNAVVYY 138
LS+ T+ +RV D+ND+ P F Y+ SV E G AV V A+DADE ++A + Y
Sbjct: 519 LSTEETLLLRVADLNDQPPLFSQQHYKASVSEAAAPGTAVMWVSASDADEAGTEHAWLRY 578
Query: 139 SV--------PEDIP-------FVVDANTGDIRTNKALDYEKQQLYLERV 173
++ PE +P F +D +G I T + LD E Q+ RV
Sbjct: 579 TLVQLSAPCNPEALPAAECGPSFAIDPESGVISTIRTLDREVQEAVELRV 628
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 66/162 (40%), Gaps = 30/162 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE---HQGPI---------- 76
G ++ V ATD+DSG +G V Y L+ D +S F +D T P+
Sbjct: 782 GTEIINVLATDRDSGIYGTVAYELIPG--DVSSLFTIDSTTGIIYLTSPLSHLESTTLSL 839
Query: 77 ----QDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEF----SVPEGQDGLAVGRVHAT 126
QD GGL++ A V I + EF+ Y F VPE +G V A
Sbjct: 840 MVSAQDSGGLTAVINAEVTIHIFQTTLAPAEFERPKYTFLVYEDVPEDS---PIGTVKAR 896
Query: 127 DADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQ 166
+ + Y D+ F + G IRT K LD+E Q
Sbjct: 897 EPLNSSEPIFYRISSGDLGGKFSIHPWLGTIRTRKPLDHETQ 938
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 45/99 (45%), Gaps = 16/99 (16%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV-PEDI 144
+V +RV D ND P F+ Y +V E Q G V RV ATD D G N V YS+ +
Sbjct: 281 SVELRVLDENDNPPVFEQDEYRAAVREDAQLGAEVCRVRATDRDLGPNGFVRYSIRARQV 340
Query: 145 P--------------FVVDANTGDIRTNKALDYEKQQLY 169
P F V+ +G +R + LD E Q +
Sbjct: 341 PGAGSGGGALGDAAYFAVEELSGVVRLRRPLDREAQAWH 379
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPE 142
S+ VNI V D+ND +P F E + + Q G A+ A D D G+N ++ YS+
Sbjct: 956 SSTEVNITVLDVNDNHPAFLRTSDEIRISQTTQPGTALYLARAEDRDSGRNGLLRYSIAS 1015
Query: 143 DIP--FVVDANTGDIRTNKALDY-EKQQLYL 170
P F +D G + N +L E+++L L
Sbjct: 1016 PQPGVFAIDRALGVLFLNGSLGAGERRELTL 1046
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 65/182 (35%), Gaps = 28/182 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQ-G 74
SL Y ++ LG + V A D+D+G + Y ++ N Y + +
Sbjct: 2662 SLSYHTHVKEGTPLGSHITVVSANDRDTGSHAEIIYHIISGNEKGNFYLEENTGVLYLVK 2721
Query: 75 PIQDEGGLSSTATVN---------------IRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
P+ E T TV + V D ND P+F + VPE
Sbjct: 2722 PLDYEEMAKFTLTVQASDAEKKHFSFAVVFVNVLDDNDHAPQFMFSSFNCIVPENLPVSS 2781
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDI-----------PFVVDANTGDIRTNKALDYEKQQ 167
+ + A D D G + YS+ F++D TGDI + LDYE
Sbjct: 2782 TICSISALDFDAGPYGELTYSIISSCFLTHGMSYDHDLFLIDPLTGDIHAKQILDYENGN 2841
Query: 168 LY 169
Y
Sbjct: 2842 KY 2843
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 22/138 (15%)
Query: 42 DSGKFGLVEY-------RLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTD 94
DS FG+ Y R LD + F + G +Q+ +S+T TV++R D
Sbjct: 1124 DSAVFGIRPYTGWIYLRRQLDYESTQTYNFRVFAWIPEDGLLQN---VSTTVTVHVR--D 1178
Query: 95 INDKNPEFQS----LPYEFS-VPEGQDGLAVGRVHATDADEGQNA-VVYYSVPEDIPFVV 148
ND +P F L E S VP+G +G++ A D D G+N ++Y+ + + F +
Sbjct: 1179 ENDNSPTFLHDVLFLKVEESPVPQG----VIGKITAIDIDYGRNGQLLYFLLSDGRFFKM 1234
Query: 149 DANTGDIRTNKALDYEKQ 166
+ NTG ALD E +
Sbjct: 1235 NPNTGSXXXXXALDREHR 1252
Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 6/109 (5%)
Query: 54 LDNNTDAA---SYFNLDPATEHQGPIQDEGGLSST-ATVNIRVTDINDKNPEFQSLPYEF 109
+D NT + + TE++ IQ + T + +RV D+ND P F Y+
Sbjct: 2390 IDQNTGVVVLVKTLDFEEVTEYKLLIQISDSVHRTEGALVVRVLDVNDNPPVFSRDFYQV 2449
Query: 110 SVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRT 157
+VPE G +V V ATD + +N + Y + F +D G I T
Sbjct: 2450 TVPESTPVGYSVLTVSATDLESNEN-ISYRIISSSKEFSIDPKNGTIFT 2497
Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 57/146 (39%), Gaps = 34/146 (23%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT----------DAASYF---N 65
Y A R+ +LG + +V+ATD+D G G V Y + A+YF
Sbjct: 301 YRAAVREDAQLGAEVCRVRATDRDLGPNGFVRYSIRARQVPGAGSGGGALGDAAYFAVEE 360
Query: 66 LDPATEHQGPIQDE-------------GGLS---STATVNIRVTDINDKNPEFQSLPYE- 108
L + P+ E GG+ +T V+I V D+ND P L
Sbjct: 361 LSGVVRLRRPLDREAQAWHQLVVEARDGGVEPEVATVRVSIAVLDVNDNRPAIHVLFLTE 420
Query: 109 ---FSVPEG-QDGLAVGRVHATDADE 130
V EG + G V RV +DAD
Sbjct: 421 GGLACVSEGARPGDYVARVSVSDADR 446
>gi|119625349|gb|EAX04944.1| dachsous 2 (Drosophila), isoform CRA_c [Homo sapiens]
Length = 2776
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 77/162 (47%), Gaps = 31/162 (19%)
Query: 35 QVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP------IQ 77
++ A D DSGK G + Y LL + +F ++P T EH+G +
Sbjct: 617 KITAIDMDSGKNGQLLYFLLSD----GKFFKMNPNTGELINWVALDREHRGHHEMTVLVT 672
Query: 78 DEGGLSSTAT--VNIRVTDINDKNPEF-QSLP---YEFSVPEGQD-GLAVGRVHATDADE 130
D G AT V + VTDIND P F Q LP V EGQ + V V A D DE
Sbjct: 673 DRGSPPRNATMAVYVSVTDINDNRPFFPQCLPGKELHVKVLEGQPVNMLVTTVFAKDPDE 732
Query: 131 GQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
G NA V YSV + F +DAN+G+IRT L Y+ + Y
Sbjct: 733 GNNAEVTYSVSSEDSSDHFKIDANSGEIRTTTILSYDYRPSY 774
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 31/184 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA-------- 69
F A ++ +G + + A D D G+ G V Y +L N + F LD +
Sbjct: 1028 FPNAHVKEDVTVGSLVHHITAHDPDEGRNGKVTYSILSGNENMT--FMLDESSGLLTTTC 1085
Query: 70 -------TEHQGPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
T+H + D+G LSS+ T+ + V D+ND+ P F+ YE SV E Q+ G
Sbjct: 1086 PLDYEMKTQHILTVLALDDGTPALSSSQTLTVTVLDVNDEAPVFKQHLYEASVKENQNPG 1145
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLE 171
V RV A D D G N+ + + + +P F ++++TG++ T LD E Q+++
Sbjct: 1146 EFVTRVEALDRDSGVNSKLQFEI---MPGASFELFEINSDTGEVVTTTILDREIQEVFTL 1202
Query: 172 RVFL 175
RV +
Sbjct: 1203 RVLV 1206
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 29/180 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------- 68
+L+Y + R+ E+G ++ + A DKD G G EY L D +A+ F +DP
Sbjct: 1340 TLYYQSSVREDAEVGTVVLVLSAVDKDEGLNGQTEYFLTD---EASGAFTIDPMSGTLKT 1396
Query: 69 ---------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYE-FSVP 112
A IQ G S+T + + VTD+ND +P + P++ F P
Sbjct: 1397 SNTLDREARSQHTFSAVARDCSIQ--GSRSTTVIIKVYVTDVNDNDPVLEQNPFDVFLSP 1454
Query: 113 EGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLE 171
E V A D D G N V +S E F +D TG+I+ + E ++L+
Sbjct: 1455 ESPTNQTTVIVRADDLDLGPNGTVVFSFAETQSMFSIDKYTGEIQFQQNPSSEYFPIWLQ 1514
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 68/149 (45%), Gaps = 30/149 (20%)
Query: 34 MQVKATDKDSGKFGLVEYRLLDN--NTDAASYFNLDPATEHQGPI--------------- 76
+ V A+D DSG +G +EY L D + +A F +DP H G I
Sbjct: 88 LHVTASDADSGLYGFIEYSLYDGFLSYEAPQAFRIDP---HDGQICVSQDIDRERDPATY 144
Query: 77 ------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDAD 129
+D GGLS+ A V + + D+ND P F Y S+ E Q G + V ATD D
Sbjct: 145 DLLVEAKDGGGLSAQAFVRVDLEDVNDNRPVFNPSTYVTSISDETQPGTEIINVLATDQD 204
Query: 130 EG-QNAVVYYSVPEDIP--FVVDANTGDI 155
G V Y +P ++ F +D+ TG I
Sbjct: 205 SGIYGTVAYELIPGNVSSLFTIDSTTGII 233
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 81/175 (46%), Gaps = 27/175 (15%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA-------------SYF 64
Y A + ++QV ATD DSG GL+EY +L N + A +
Sbjct: 1651 IYQASVSESQLYNAHVIQVFATDLDSGLNGLIEYSILSGNQEEAFQIDALSGVITTKAIL 1710
Query: 65 NLDPATEHQGPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD---G 117
+ + + + +Q D+G LS+T + ++VTDIND P F LP E +V +D G
Sbjct: 1711 DYELTSSYSLIVQATDKGMPRLSNTTVIKVQVTDINDNAPAF--LPSE-AVEITEDSLPG 1767
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ V V D D +A ++ E P F +D NTG + K LD+E+ Y
Sbjct: 1768 VIVTHVSVHDVDLN-SAFIFSFAKESNPGTKFAIDQNTGVVVLVKTLDFEEMTEY 1821
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSG-----KFGLV---EYRLLDNNTDAASYFN---L 66
Y A ++ G + +V+A D+DSG +F ++ + L + N+D L
Sbjct: 1133 LYEASVKENQNPGEFVTRVEALDRDSGVNSKLQFEIMPGASFELFEINSDTGEVVTTTIL 1192
Query: 67 DPATEH----QGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
D + + ++D G LSST T+ V D ND PEF Y+ V E Q+ V
Sbjct: 1193 DREIQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEFIVSSYDIEVLENQEPEVV 1252
Query: 121 GRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEK 165
V A+D D G N V Y + + D F ++ +G++ T +ALD E+
Sbjct: 1253 YTVLASDMDAGNNRAVEYHIIDGNTDECFTINEMSGELSTTRALDREQ 1300
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 25/189 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--TDAASY----FNLDPATE- 71
+ + + + T+ + A D D+G +G + Y ++ T SY F +DP T
Sbjct: 2179 FSCIVPENLPISSTICSINALDFDAGPYGELTYSIVSPCFLTHGMSYDHDLFLIDPLTGD 2238
Query: 72 -HQGPI---------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-G 114
H I +D+G +++ V + + I++ P F Y F++PE
Sbjct: 2239 IHAKQILDYENGNKYCLTVQAKDKGDATASLVVWVDIEGIDEFEPIFTQDQYFFTLPEKN 2298
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEKQQLYLERV 173
+D +GRV A+DAD G + V+ YS+ PF V+ G+I +AL K QL E
Sbjct: 2299 KDRQLIGRVEASDADAGIDGVILYSLGTSSPFFSVNKTNGNIYLIRALPLIKSQLNKEDT 2358
Query: 174 FLISKFATS 182
+ A S
Sbjct: 2359 LEMKIIAHS 2367
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
LSSTA ++I+V D+ND P F SL Y V E G + V A D D G +A + Y++
Sbjct: 2050 LSSTAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGSHITVVSANDRDTGSHAEIIYNI 2109
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEK 165
E F ++ NTG + K LDYEK
Sbjct: 2110 ISGNEKGHFYLEENTGVLYLIKPLDYEK 2137
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 30/156 (19%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------------- 82
V A+D D+G VEY ++D NTD N E G + L
Sbjct: 1255 VLASDMDAGNNRAVEYHIIDGNTDECFTIN-----EMSGELSTTRALDREQISNFTLVIL 1309
Query: 83 ---------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQ 132
SS + +RV D ND +P F +L Y+ SV E + G V + A D DEG
Sbjct: 1310 CSDLGDPPRSSVIHLQVRVLDANDHSPSFPTLYYQSSVREDAEVGTVVLVLSAVDKDEGL 1369
Query: 133 NAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQ 166
N Y + ++ F +D +G ++T+ LD E +
Sbjct: 1370 NGQTEYFLTDEASGAFTIDPMSGTLKTSNTLDREAR 1405
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---PED 143
T I + D+ND NP F S P + G V + A D DEG+N V YS+ E+
Sbjct: 1010 TAQIVILDVNDHNPTFISFPNAHVKEDVTVGSLVHHITAHDPDEGRNGKVTYSILSGNEN 1069
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
+ F++D ++G + T LDYE + ++ V +
Sbjct: 1070 MTFMLDESSGLLTTTCPLDYEMKTQHILTVLAL 1102
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 70/176 (39%), Gaps = 36/176 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-- 76
Y D+ + G ++ V ATD+DSG +G V Y L+ N +S F +D T G I
Sbjct: 181 YVTSISDETQPGTEIINVLATDQDSGIYGTVAYELIPGN--VSSLFTIDSTT---GIIYL 235
Query: 77 ------------------QDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEF----SVP 112
QD GGL++ A V I + EF+ Y F VP
Sbjct: 236 TLPLSHLESTTLLLMVSAQDGGGLTAVINADVTIHIFQTTLAPAEFERPKYTFLVYEDVP 295
Query: 113 EGQDGLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQ 166
E +G V A + + Y D+ F + G IRT K LD+E Q
Sbjct: 296 EDS---PIGTVKAREPLNSSEPIFYRISSGDLGGKFSIHPRLGTIRTRKPLDHETQ 348
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 71/187 (37%), Gaps = 30/187 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF----------- 64
SL Y ++ LG + V A D+D+G + Y ++ N Y
Sbjct: 2072 SLSYHTHVKESTPLGSHITVVSANDRDTGSHAEIIYNIISGNEKGHFYLEENTGVLYLIK 2131
Query: 65 --NLDPATEHQGPIQD---EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
+ + T+ +Q E S A V + V D ND P+F + VPE
Sbjct: 2132 PLDYEKMTKFTLTVQASDAEKKHFSFAVVFVSVLDDNDHAPQFMFSSFSCIVPENLPISS 2191
Query: 119 AVGRVHATDADEGQNAVVYYSV------------PEDIPFVVDANTGDIRTNKALDYEKQ 166
+ ++A D D G + YS+ D+ F++D TGDI + LDYE
Sbjct: 2192 TICSINALDFDAGPYGELTYSIVSPCFLTHGMSYDHDL-FLIDPLTGDIHAKQILDYENG 2250
Query: 167 QLYLERV 173
Y V
Sbjct: 2251 NKYCLTV 2257
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 76 IQDEGGLSSTAT-VNIRVTDINDKNPEFQS----LPYEFS-VPEGQDGLAVGRVHATDAD 129
I ++G L + +T V +RV D ND +P F L E S VP+G +G++ A D D
Sbjct: 569 IPEDGFLQNVSTTVIVRVWDENDNSPTFLHDVLFLKVEESPVPQG----VIGKITAIDMD 624
Query: 130 EGQNA-VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQ 166
G+N ++Y+ + + F ++ NTG++ ALD E +
Sbjct: 625 SGKNGQLLYFLLSDGKFFKMNPNTGELINWVALDREHR 662
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPE 142
S+ VNI V D+ND +P F E + + G A+ A D D G+N ++ YS+
Sbjct: 366 SSTEVNITVMDVNDNHPAFLRTSDEIRISQTTPPGTALYLARAEDRDSGRNGLIRYSIAS 425
Query: 143 DIP--FVVDANTGDIRTNKALDYEKQQ 167
P F +D G + N +L +Q+
Sbjct: 426 PQPGVFAIDRALGVLFLNGSLGAGEQR 452
>gi|119625352|gb|EAX04947.1| dachsous 2 (Drosophila), isoform CRA_e [Homo sapiens]
Length = 2666
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 77/162 (47%), Gaps = 31/162 (19%)
Query: 35 QVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP------IQ 77
++ A D DSGK G + Y LL + +F ++P T EH+G +
Sbjct: 507 KITAIDMDSGKNGQLLYFLLSD----GKFFKMNPNTGELINWVALDREHRGHHEMTVLVT 562
Query: 78 DEGGLSSTAT--VNIRVTDINDKNPEF-QSLP---YEFSVPEGQD-GLAVGRVHATDADE 130
D G AT V + VTDIND P F Q LP V EGQ + V V A D DE
Sbjct: 563 DRGSPPRNATMAVYVSVTDINDNRPFFPQCLPGKELHVKVLEGQPVNMLVTTVFAKDPDE 622
Query: 131 GQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
G NA V YSV + F +DAN+G+IRT L Y+ + Y
Sbjct: 623 GNNAEVTYSVSSEDSSDHFKIDANSGEIRTTTILSYDYRPSY 664
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 31/184 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA-------- 69
F A ++ +G + + A D D G+ G V Y +L N + F LD +
Sbjct: 918 FPNAHVKEDVTVGSLVHHITAHDPDEGRNGKVTYSILSGNENMT--FMLDESSGLLTTTC 975
Query: 70 -------TEHQGPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
T+H + D+G LSS+ T+ + V D+ND+ P F+ YE SV E Q+ G
Sbjct: 976 PLDYEMKTQHILTVLALDDGTPALSSSQTLTVTVLDVNDEAPVFKQHLYEASVKENQNPG 1035
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLE 171
V RV A D D G N+ + + + +P F ++++TG++ T LD E Q+++
Sbjct: 1036 EFVTRVEALDRDSGVNSKLQFEI---MPGASFELFEINSDTGEVVTTTILDREIQEVFTL 1092
Query: 172 RVFL 175
RV +
Sbjct: 1093 RVLV 1096
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 29/180 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------- 68
+L+Y + R+ E+G ++ + A DKD G G EY L D +A+ F +DP
Sbjct: 1230 TLYYQSSVREDAEVGTVVLVLSAVDKDEGLNGQTEYFLTD---EASGAFTIDPMSGTLKT 1286
Query: 69 ---------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYE-FSVP 112
A IQ G S+T + + VTD+ND +P + P++ F P
Sbjct: 1287 SNTLDREARSQHTFSAVARDCSIQ--GSRSTTVIIKVYVTDVNDNDPVLEQNPFDVFLSP 1344
Query: 113 EGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLE 171
E V A D D G N V +S E F +D TG+I+ + E ++L+
Sbjct: 1345 ESPTNQTTVIVRADDLDLGPNGTVVFSFAETQSMFSIDKYTGEIQFQQNPSSEYFPIWLQ 1404
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 81/175 (46%), Gaps = 27/175 (15%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA-------------SYF 64
Y A + ++QV ATD DSG GL+EY +L N + A +
Sbjct: 1541 IYQASVSESQLYNAHVIQVFATDLDSGLNGLIEYSILSGNQEEAFQIDALSGVITTKAIL 1600
Query: 65 NLDPATEHQGPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD---G 117
+ + + + +Q D+G LS+T + ++VTDIND P F LP E +V +D G
Sbjct: 1601 DYELTSSYSLIVQATDKGMPRLSNTTVIKVQVTDINDNAPAF--LPSE-AVEITEDSLPG 1657
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ V V D D +A ++ E P F +D NTG + K LD+E+ Y
Sbjct: 1658 VIVTHVSVHDVDLN-SAFIFSFAKESNPGTKFAIDQNTGVVVLVKTLDFEEMTEY 1711
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSG-----KFGLV---EYRLLDNNTDAASYFN---L 66
Y A ++ G + +V+A D+DSG +F ++ + L + N+D L
Sbjct: 1023 LYEASVKENQNPGEFVTRVEALDRDSGVNSKLQFEIMPGASFELFEINSDTGEVVTTTIL 1082
Query: 67 DPATEH----QGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
D + + ++D G LSST T+ V D ND PEF Y+ V E Q+ V
Sbjct: 1083 DREIQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEFIVSSYDIEVLENQEPEVV 1142
Query: 121 GRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEK 165
V A+D D G N V Y + + D F ++ +G++ T +ALD E+
Sbjct: 1143 YTVLASDMDAGNNRAVEYHIIDGNTDECFTINEMSGELSTTRALDREQ 1190
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 25/189 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--TDAASY----FNLDPATE- 71
+ + + + T+ + A D D+G +G + Y ++ T SY F +DP T
Sbjct: 2069 FSCIVPENLPISSTICSINALDFDAGPYGELTYSIVSPCFLTHGMSYDHDLFLIDPLTGD 2128
Query: 72 -HQGPI---------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-G 114
H I +D+G +++ V + + I++ P F Y F++PE
Sbjct: 2129 IHAKQILDYENGNKYCLTVQAKDKGDATASLVVWVDIEGIDEFEPIFTQDQYFFTLPEKN 2188
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEKQQLYLERV 173
+D +GRV A+DAD G + V+ YS+ PF V+ G+I +AL K QL E
Sbjct: 2189 KDRQLIGRVEASDADAGIDGVILYSLGTSSPFFSVNKTNGNIYLIRALPLIKSQLNKEDT 2248
Query: 174 FLISKFATS 182
+ A S
Sbjct: 2249 LEMKIIAHS 2257
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
LSSTA ++I+V D+ND P F SL Y V E G + V A D D G +A + Y++
Sbjct: 1940 LSSTAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGSHITVVSANDRDTGSHAEIIYNI 1999
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEK 165
E F ++ NTG + K LDYEK
Sbjct: 2000 ISGNEKGHFYLEENTGVLYLIKPLDYEK 2027
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 30/156 (19%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------------- 82
V A+D D+G VEY ++D NTD N E G + L
Sbjct: 1145 VLASDMDAGNNRAVEYHIIDGNTDECFTIN-----EMSGELSTTRALDREQISNFTLVIL 1199
Query: 83 ---------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQ 132
SS + +RV D ND +P F +L Y+ SV E + G V + A D DEG
Sbjct: 1200 CSDLGDPPRSSVIHLQVRVLDANDHSPSFPTLYYQSSVREDAEVGTVVLVLSAVDKDEGL 1259
Query: 133 NAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQ 166
N Y + ++ F +D +G ++T+ LD E +
Sbjct: 1260 NGQTEYFLTDEASGAFTIDPMSGTLKTSNTLDREAR 1295
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---PED 143
T I + D+ND NP F S P + G V + A D DEG+N V YS+ E+
Sbjct: 900 TAQIVILDVNDHNPTFISFPNAHVKEDVTVGSLVHHITAHDPDEGRNGKVTYSILSGNEN 959
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
+ F++D ++G + T LDYE + ++ V +
Sbjct: 960 MTFMLDESSGLLTTTCPLDYEMKTQHILTVLAL 992
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 70/176 (39%), Gaps = 36/176 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-- 76
Y D+ + G ++ V ATD+DSG +G V Y L+ N +S F +D T G I
Sbjct: 71 YVTSISDETQPGTEIINVLATDQDSGIYGTVAYELIPGN--VSSLFTIDSTT---GIIYL 125
Query: 77 ------------------QDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEF----SVP 112
QD GGL++ A V I + EF+ Y F VP
Sbjct: 126 TLPLSHLESTTLLLMVSAQDGGGLTAVINADVTIHIFQTTLAPAEFERPKYTFLVYEDVP 185
Query: 113 EGQDGLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQ 166
E +G V A + + Y D+ F + G IRT K LD+E Q
Sbjct: 186 EDS---PIGTVKAREPLNSSEPIFYRISSGDLGGKFSIHPRLGTIRTRKPLDHETQ 238
Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 70/183 (38%), Gaps = 30/183 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF----------- 64
SL Y ++ LG + V A D+D+G + Y ++ N Y
Sbjct: 1962 SLSYHTHVKESTPLGSHITVVSANDRDTGSHAEIIYNIISGNEKGHFYLEENTGVLYLIK 2021
Query: 65 --NLDPATEHQGPIQD---EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
+ + T+ +Q E S A V + V D ND P+F + VPE
Sbjct: 2022 PLDYEKMTKFTLTVQASDAEKKHFSFAVVFVSVLDDNDHAPQFMFSSFSCIVPENLPISS 2081
Query: 119 AVGRVHATDADEGQNAVVYYSV------------PEDIPFVVDANTGDIRTNKALDYEKQ 166
+ ++A D D G + YS+ D+ F++D TGDI + LDYE
Sbjct: 2082 TICSINALDFDAGPYGELTYSIVSPCFLTHGMSYDHDL-FLIDPLTGDIHAKQILDYENG 2140
Query: 167 QLY 169
Y
Sbjct: 2141 NKY 2143
Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 76 IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNA 134
++ GGLS+ A V + + D+ND P F Y S+ E Q G + V ATD D G
Sbjct: 40 VEVTGGLSAQAFVRVDLEDVNDNRPVFNPSTYVTSISDETQPGTEIINVLATDQDSGIYG 99
Query: 135 VVYYS-VPEDIP--FVVDANTGDI 155
V Y +P ++ F +D+ TG I
Sbjct: 100 TVAYELIPGNVSSLFTIDSTTGII 123
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 76 IQDEGGLSSTAT-VNIRVTDINDKNPEFQS----LPYEFS-VPEGQDGLAVGRVHATDAD 129
I ++G L + +T V +RV D ND +P F L E S VP+G +G++ A D D
Sbjct: 459 IPEDGFLQNVSTTVIVRVWDENDNSPTFLHDVLFLKVEESPVPQG----VIGKITAIDMD 514
Query: 130 EGQNA-VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQ 166
G+N ++Y+ + + F ++ NTG++ ALD E +
Sbjct: 515 SGKNGQLLYFLLSDGKFFKMNPNTGELINWVALDREHR 552
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPE 142
S+ VNI V D+ND +P F E + + G A+ A D D G+N ++ YS+
Sbjct: 256 SSTEVNITVMDVNDNHPAFLRTSDEIRISQTTPPGTALYLARAEDRDSGRNGLIRYSIAS 315
Query: 143 DIP--FVVDANTGDIRTNKALDYEKQQ 167
P F +D G + N +L +Q+
Sbjct: 316 PQPGVFAIDRALGVLFLNGSLGAGEQR 342
>gi|348572630|ref|XP_003472095.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-8-like [Cavia porcellus]
Length = 799
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 86/185 (46%), Gaps = 31/185 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + LG ++ V ATD D +G +L+ + + YF+++P T
Sbjct: 172 YHATVPEMSILGTSVTNVTATDADDPVYG-NSAKLVYSILEGQPYFSIEPETAIIKTALP 230
Query: 71 --------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
E+ IQ + GGLS T T+ + ++D+ND P+F Y FSVPE
Sbjct: 231 NMDREAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLSDVNDNPPKFAQSLYHFSVPEDVV 290
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQL 168
G A+GRV A D D G+NA Y + + +I A G IR K LD+E ++
Sbjct: 291 LGTAIGRVKANDQDIGENAQSSYDIIDGDGTALFEITSDAQAQDGIIRLRKPLDFETKKS 350
Query: 169 YLERV 173
Y +V
Sbjct: 351 YTLKV 355
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND PEF + PY +VPE G +V V ATDAD+ G +A + YS+ E P
Sbjct: 155 IKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEGQP 214
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLYL 170
F ++ T I+T +D E ++ YL
Sbjct: 215 YFSIEPETAIIKTALPNMDREAKEEYL 241
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNA--VVYYSVP 141
S V I+V D+ND PEF S F G+ G + V A D D+ +N +Y +P
Sbjct: 478 SRVPVAIKVLDVNDNAPEFASEYEAFLCENGKPGQVIQTVSAMDKDDPKNGHYFLYSLLP 537
Query: 142 E---DIPFVVDANTGD----IRTNKALDYEKQQLYL 170
E + F + N + + + + +KQ++YL
Sbjct: 538 EMANNPNFTIKKNEDNSLSILAKHNGFNRQKQEVYL 573
>gi|301624551|ref|XP_002941564.1| PREDICTED: cadherin-24-like [Xenopus (Silurana) tropicalis]
Length = 723
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 45/192 (23%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV A+D D +G RL+ + YF++DP T
Sbjct: 92 YRATVPEMSNVGTSVIQVTASDADDPTYG-NSARLVYTILEGQPYFSVDPQTGVIRTAIP 150
Query: 71 --------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
E IQ + GGLS + TV + ++D+ND P+F Y+F+V E
Sbjct: 151 NMDRETQNEFLVVIQAKDMGGHVGGLSGSTTVTVTLSDVNDNPPKFPQNLYQFTVLENIA 210
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD--------------IRTNKAL 161
G +GR+ A D D G+NA + YS ++D + GD +R K+L
Sbjct: 211 PGSVIGRLRAHDPDIGENAAMSYS-------ILDGDAGDTFSVVSDSAGQDGILRVRKSL 263
Query: 162 DYEKQQLYLERV 173
D+E Q+ + RV
Sbjct: 264 DFESQRSFTFRV 275
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P F PY +VPE + G +V +V A+DAD+ G +A + Y++ E P
Sbjct: 75 IKVQDINDNPPVFLHPPYRATVPEMSNVGTSVIQVTASDADDPTYGNSARLVYTILEGQP 134
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLYL 170
F VD TG IRT +D E Q +L
Sbjct: 135 YFSVDPQTGVIRTAIPNMDRETQNEFL 161
>gi|431899578|gb|ELK07541.1| Cadherin EGF LAG seven-pass G-type receptor 1 [Pteropus alecto]
Length = 964
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 87/180 (48%), Gaps = 28/180 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---------------------NN 57
Y R+ E+G ++ ++ATD D+ + YRLL+ +
Sbjct: 75 YRERVRENLEVGYEVLTIRATDGDAPSNANMRYRLLEGAGGVFEIDARSGVVRTRAAVDR 134
Query: 58 TDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QD 116
+AA+Y L A + QG ++ G LS+TATV+I V D ND P+F Y VPE
Sbjct: 135 EEAAAYQLLVEAND-QG--RNPGPLSATATVHIVVEDENDNYPQFSEKRYVVQVPEDVAV 191
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
AV RV ATD D+GQNA ++YS+ F + + +G + LD+E + Y R+
Sbjct: 192 NTAVLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLRI 251
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQ-- 73
+G +++ ++A D+D+ ++ Y+L NT + LD E Q
Sbjct: 420 VGSSVLTLRAHDRDANS--VITYQLTGGNTRNRFALSSQSGGGLITLALPLDYKQERQYV 477
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G S TA V I VTD N P FQS Y SV E + G ++ + A+D D G
Sbjct: 478 LAVTASDGTRSHTAQVFINVTDANTHRPVFQSSHYTVSVSEDRPLGTSIATISASDEDTG 537
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + +P F +D ++G + T LDYE Q Y
Sbjct: 538 ENARITYVLEDPVPQFRIDPDSGTVYTMTELDYEDQAAY 576
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 78/181 (43%), Gaps = 33/181 (18%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY------------------------RL 53
FY + +++QV ATD+DSG G + Y R
Sbjct: 614 FYQGSVFEDAPAATSVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFYVEPTSGVIRTQRR 673
Query: 54 LDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
LD A +NL +G LS++ + + V DIND P F+ E V E
Sbjct: 674 LDRENVAV--YNLRALAVDRG---SPAPLSASVDIQVTVLDINDNPPVFERDELELFVEE 728
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLY 169
G V R+ A D DEG NA + Y + E ++P F +D +GD+R LD+E Q+ Y
Sbjct: 729 NSPVGSVVARIRANDPDEGPNAQIMYQIVEGNVPEVFQLDLLSGDLRALVELDFEVQREY 788
Query: 170 L 170
+
Sbjct: 789 M 789
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 19/129 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-LDPATEHQGPI----------- 76
+ +++V+ATD+D G+ + Y ++ N Y + L + + P+
Sbjct: 191 VNTAVLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLR 250
Query: 77 ---QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
QD G ++S+ V+++V D+ND P F S P++ +V E G +V + A DAD
Sbjct: 251 IKAQDAGRPPLINSSGLVSVQVLDVNDNAPLFVSSPFQAAVLENVPLGHSVLHIQAVDAD 310
Query: 130 EGQNAVVYY 138
G+N+ + Y
Sbjct: 311 AGENSRLRY 319
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 28/187 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y + LG ++ + A+D+D+G+ + Y L D F +DP +
Sbjct: 509 SSHYTVSVSEDRPLGTSIATISASDEDTGENARITYVL----EDPVPQFRIDPDSGTVYT 564
Query: 71 ------EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E Q +D G S T ++ I + D ND P F Y+ SV E
Sbjct: 565 MTELDYEDQAAYTLAITARDNGIPQKSDTTSLEILILDANDNAPRFLRDFYQGSVFEDAP 624
Query: 116 DGLAVGRVHATDADEGQNAVVYYS----VPEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
+V +V ATD D G N + Y+ D F V+ +G IRT + LD E +Y
Sbjct: 625 AATSVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFYVEPTSGVIRTQRRLDRENVAVYNL 684
Query: 172 RVFLISK 178
R + +
Sbjct: 685 RALAVDR 691
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 59/133 (44%), Gaps = 11/133 (8%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKN 99
D DSG R LD T + A +H P + S+ + + V+D ND +
Sbjct: 16 DTDSGTVSTA--RPLDRETKDTHVLKVS-AVDHGSPRR-----SAATYLTVTVSDTNDHS 67
Query: 100 PEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIR 156
P F+ Y V E + G V + ATD D NA + Y + E F +DA +G +R
Sbjct: 68 PVFEQSEYRERVRENLEVGYEVLTIRATDGDAPSNANMRYRLLEGAGGVFEIDARSGVVR 127
Query: 157 TNKALDYEKQQLY 169
T A+D E+ Y
Sbjct: 128 TRAAVDREEAAAY 140
Score = 38.9 bits (89), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 79/185 (42%), Gaps = 47/185 (25%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL------DPATEHQGPIQ----- 77
LG +++ ++A D D+G+ + Y L+D T AAS DPA+ P Q
Sbjct: 297 LGHSVLHIQAVDADAGENSRLRYHLVD--TGAASVGGTGAGSQEDPASAASFPFQIHNSS 354
Query: 78 ------------------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
D G +SS+A+V+I V D+ND +P F YE +
Sbjct: 355 GWITVCAELDREQVEHYSFGVEAVDHGSPPMSSSASVSITVLDVNDNDPIFTQPVYELRL 414
Query: 112 PE-GQDGLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGD--IRTNKALDYEK 165
E G +V + A D D N+V+ Y + F + + +G I LDY++
Sbjct: 415 NEDAAVGSSVLTLRAHDRD--ANSVITYQLTGGNTRNRFALSSQSGGGLITLALPLDYKQ 472
Query: 166 QQLYL 170
++ Y+
Sbjct: 473 ERQYV 477
>gi|312377967|gb|EFR24666.1| hypothetical protein AND_10582 [Anopheles darlingi]
Length = 3660
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 80/178 (44%), Gaps = 32/178 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------- 67
Y A + G + VKATDKD G++G V Y ++ + D +F +D
Sbjct: 1340 YDAKVNENQLAGRLVTTVKATDKDFGEYGRVAYSIISD--DMQEHFAIDKERGELVTKKK 1397
Query: 68 ----PATEHQGPIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVG 121
++ PI D GG + TV IR+ D ND P FQ Y+ + Q L V
Sbjct: 1398 LDREARAAYEVPIMAVDAGGKAGFCTVRIRIGDENDNQPAFQYREYKTLI---QGNLTVN 1454
Query: 122 ----RVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
RV A DADE QNAVV YS+ + F VD NTG + K+ + QL+
Sbjct: 1455 TTFYRVRALDADENQNAVVKYSIFDSQNSGIRELFGVDENTGGLYLQKSAVQMENQLF 1512
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQDEGG--- 81
E+G + ++ ATD D G ++Y LD+ D +F + P + P+ E
Sbjct: 1972 EVGTLVTKIHATDADIGINRKIKYSFLDSYRD---HFRIAPESGIVTLAKPLDRELKAVY 2028
Query: 82 -------------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
LS+ AT+ I V DIND PEF S Y SVPE G + +V AT
Sbjct: 2029 NLSVSATDLGNPPLSNAATLIINVQDINDNPPEFTSKHYFASVPEINSIGSEILKVLATS 2088
Query: 128 ADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D G NA + YS+ E F ++ TG + LDYE+ + Y
Sbjct: 2089 KDTGINAEISYSIIGGNEHRKFAINNRTGVLSLADTLDYERARDYF 2134
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 11/133 (8%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKN 99
DKDSG+ L R LD + A ++L + + D G ++ + + +TD+ND
Sbjct: 1904 DKDSGQ--LKTSRRLDRESQAR--YSLMAHVQDR----DHPGWECSSQIELTLTDLNDNP 1955
Query: 100 PEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIR 156
P+F PY ++PE + G V ++HATDAD G N + YS + F + +G +
Sbjct: 1956 PDFSMNPYSVTLPEDAEVGTLVTKIHATDADIGINRKIKYSFLDSYRDHFRIAPESGIVT 2015
Query: 157 TNKALDYEKQQLY 169
K LD E + +Y
Sbjct: 2016 LAKPLDRELKAVY 2028
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 67/139 (48%), Gaps = 14/139 (10%)
Query: 42 DSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPE 101
D+G+ L + LD T A + T+ P L++ + + V D ND P
Sbjct: 1594 DAGQLRLA--KTLDRETRGAHLIAILAETDSSPP------LTAVTEIVLHVQDENDNTPI 1645
Query: 102 FQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP-----FVVDANTGDI 155
F+S PY F++ E + + +V A DAD G N + Y++ D+ F VDA+TG I
Sbjct: 1646 FESNPYSFTLAENIEKNKPIMKVLARDADSGPNGDIRYALSPDVGDIVNIFDVDAHTGWI 1705
Query: 156 RTNKALDYEKQQLYLERVF 174
T LD EK++ Y +V
Sbjct: 1706 STLVPLDKEKREDYKFQVL 1724
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 80/179 (44%), Gaps = 21/179 (11%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-------------DAAS 62
S Y A + + +G +++V AT KD+G + Y ++ N A
Sbjct: 2064 SKHYFASVPEINSIGSEILKVLATSKDTGINAEISYSIIGGNEHRKFAINNRTGVLSLAD 2123
Query: 63 YFNLDPATEHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDG 117
+ + A ++ IQ +GG LS+ ATVNI VTD ND +P+F Y + E Q G
Sbjct: 2124 TLDYERARDYFLTIQAVDGGTPPLSNLATVNISVTDSNDNHPQFTQNSYNARIREDAQRG 2183
Query: 118 LAVGRVHATDADEGQNAVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ +V A D D +N V Y++ F ++ +TG I LD E Y+ V
Sbjct: 2184 DRILQVRANDLDAEENGRVSYTIERGDRMEQFAIEPDTGYISVAGTLDRESISNYVLEV 2242
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS 139
G+S+ V++ V D+ND PE + Y +V E G A+ +V A D D G N V+ Y+
Sbjct: 1104 GVSAEVPVSVLVQDVNDCPPEIEQDSYNITVSERAPFGTAILKVQAKDNDTGINQVINYA 1163
Query: 140 VPEDIP-----FVVDANTGDIRTNKALDYE 164
+ D F +D N G I K+LD+E
Sbjct: 1164 LQTDSKNTSEHFHMDPNDGVIYLKKSLDHE 1193
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 13/130 (10%)
Query: 55 DNNTDAASYFNLDPATEHQGPIQDEGGLSST-ATVNIRVTDINDKNPEFQSLPYEFSVPE 113
+ N A Y + + E+ I G+ + + + + V DIND PEF Y + E
Sbjct: 169 NGNVHLAKYLDWERQREYNITISVSDGVHTVYSQLFVSVIDINDHRPEFTETVYRVDISE 228
Query: 114 G-QDGLAVGRVHATDADEGQNAVVYYSV-----PEDIP-FVVDANTGDIRTNKALDYEKQ 166
++G+ V ++HATD DE + ++YS+ P + F VD+ TG I + LD E Q
Sbjct: 229 NVEEGMEVLQLHATDEDEDKK--LFYSLHAARDPMSLKLFRVDSVTGSIVMAQRLDRETQ 286
Query: 167 QLYLERVFLI 176
E V ++
Sbjct: 287 D---EHVLIV 293
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 22/152 (14%)
Query: 11 EMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-- 68
E+ DS Y ++ G +++V+A D D+G ++ Y L ++ + + +F++DP
Sbjct: 1124 EIEQDS--YNITVSERAPFGTAILKVQAKDNDTGINQVINYALQTDSKNTSEHFHMDPND 1181
Query: 69 -------------ATEHQGPI--QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
+ H + D+G LSSTA V + V D+ND P+F+ Y +
Sbjct: 1182 GVIYLKKSLDHETLSHHHFTVVASDKGVPSLSSTAHVWVSVMDMNDNPPKFEQPSYSCVL 1241
Query: 112 PE-GQDGLAVGRVHATDADEGQNAVVYYSVPE 142
E G V V A+D D + + Y++ +
Sbjct: 1242 SEHATRGQFVTVVSASDPDYIDHDRLVYTIAQ 1273
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 31/152 (20%)
Query: 34 MQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------EHQG--------PI 76
+ +KA D DSG L+ Y +LD YF++D +T +H+ +
Sbjct: 577 LVIKAKDNDSGLNALLHYDILD--MLPRRYFHIDSSTGAIKTIMFLDHEKIPFFSFHVKV 634
Query: 77 QDEGG--LSS--TATVNIRVTDINDKNPEFQSLPYEFS--VPEGQDGLAVGRVHATDADE 130
D G L+S TA V I +TD+ND P F Y + +P + +AV +++ATD D
Sbjct: 635 TDLGKPRLTSELTAEVRINITDVNDCAPAFTQSEYNVTLLLPTYAN-VAVLQLNATDEDS 693
Query: 131 G--QNAVVYYSVPE---DIPFVVDANTGDIRT 157
+N+ + Y + E D F +DA +G I T
Sbjct: 694 SSTENSTLRYDIIEGNRDGVFAIDARSGVITT 725
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD--GLAVGRVHATDADEGQNAVVYYSVPEDIP 145
VN+ + DIND P F +LPY ++V D G + +VHA D D +N V Y +
Sbjct: 857 VNVTILDINDNCPMFVNLPY-YAVVSVDDPRGSVITKVHALDLDSFENGEVRYEMKRGHG 915
Query: 146 --FVVDANTGDIRTNKAL-----DYE 164
F VD TG++ + L DYE
Sbjct: 916 ELFKVDRKTGEVTLKQTLEGHNRDYE 941
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 72/166 (43%), Gaps = 24/166 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQGP 75
+M+V A D DSG G + Y L + D + F++D T + Q
Sbjct: 1665 IMKVLARDADSGPNGDIRYALSPDVGDIVNIFDVDAHTGWISTLVPLDKEKREDYKFQVL 1724
Query: 76 IQDEGGLSSTA--TVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDAD-EG 131
D G T TV IR+ D ND P F+ Y+ +V E G V ++ TD D +
Sbjct: 1725 ATDNGEPKHTTRTTVIIRLKDYNDCPPVFRETQYKATVNEDALPGTVVLQISTTDRDVDL 1784
Query: 132 QNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
+ V YY + D F + + TG++ KALD E Y +V +
Sbjct: 1785 KTPVEYYIISGDALSQFQIKS-TGEVFVVKALDRESISEYELKVIV 1829
Score = 39.7 bits (91), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 70/168 (41%), Gaps = 22/168 (13%)
Query: 28 ELGVTLMQVKATDKDSGK------------FGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
E G+ ++Q+ ATD+D K L +R+ LD T+ +
Sbjct: 231 EEGMEVLQLHATDEDEDKKLFYSLHAARDPMSLKLFRVDSVTGSIVMAQRLDRETQDEHV 290
Query: 76 ----IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
++D+G + ATV I V D ND PEF + + V E G V +V+A D
Sbjct: 291 LIVIVKDQGTPAKRNYATVVITVHDHNDHAPEFTTKIVQGKVFETAPVGTRVAQVYAIDR 350
Query: 129 DEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
D G+NA + YS+ F +D G I K LD Y+ V
Sbjct: 351 DIGENARITYSIGSGNIGNVFTIDPTMGVISVAKQLDISAIAEYVLHV 398
Score = 36.6 bits (83), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 35/118 (29%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSV----PEGQDGLAVGR---------------- 122
S+T +V I V D+ND P F+ Y V P G L +
Sbjct: 507 SATCSVIINVLDMNDNVPYFEQQVYRGEVSEAAPIGSLVLTLSEPFLQGNGSQLTNGGTN 566
Query: 123 ------------VHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEK 165
+ A D D G NA+++Y + + +P F +D++TG I+T LD+EK
Sbjct: 567 ANHLVNSSLPLVIKAKDNDSGLNALLHYDILDMLPRRYFHIDSSTGAIKTIMFLDHEK 624
>gi|156386258|ref|XP_001633830.1| predicted protein [Nematostella vectensis]
gi|156220905|gb|EDO41767.1| predicted protein [Nematostella vectensis]
Length = 4187
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 78/163 (47%), Gaps = 24/163 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGPIQDEGGLSST 85
+ + Q ATD+D G GLV Y +++ + D S FN++ T P+ E S T
Sbjct: 701 IATVVSQFMATDEDKGYNGLVLYSIVEGDVD--SVFNINMFTGELTVAMPLDRETISSYT 758
Query: 86 ATV----------------NIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+ N+++TD+ND +P F YE ++PE G V VHA+D
Sbjct: 759 LNISAVDCGKHRKSAYTILNVKITDVNDCSPVFDKTVYEVTLPENITVGQTVTHVHASDK 818
Query: 129 DEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
D+G N + Y + D F V+ +G + LDYE+Q++Y
Sbjct: 819 DQGTNGFITYQIVNDFGGKFRVNRISGVVSVGDYLDYEEQEMY 861
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 82/179 (45%), Gaps = 28/179 (15%)
Query: 14 SDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT--- 70
S S ++ A+ D L L+QVKA D D G + Y L+ TDA F ++ T
Sbjct: 3065 SQSSYFTAVYEDA-PLKKVLLQVKADDADVGVNRKLTYSLV---TDAGGTFTIETGTGII 3120
Query: 71 EHQGPIQDE-------------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
+ P+ E GG LSS ATV I+V +IND PEF Y +V E
Sbjct: 3121 SLEKPLNRELKENYTLNVEVMDGGTPPLSSIATVQIKVLNINDVPPEFSHSIYHGNVSED 3180
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G V RV A + E N V+ Y++ + F +D G I N+ LDYE +LY
Sbjct: 3181 APIGNEVVRVRAV-SRESSNDVITYAILRGADSGLFSIDRKNGTIHVNRKLDYETTKLY 3238
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 49/85 (57%), Gaps = 6/85 (7%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS-VPEDI- 144
V ++V DIND P+F S PY S+PE D G V RV A D D G N +V Y+ V +D
Sbjct: 2742 VVVQVLDINDVTPKFVSDPYLASIPENIDIGSKVLRVFAEDLDSGSNGMVTYALVSKDKL 2801
Query: 145 ---PFVVDANTGDIRTNKALDYEKQ 166
F +D +TG I T ALD EKQ
Sbjct: 2802 VKEKFDIDQHTGWITTRGALDREKQ 2826
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 25/177 (14%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN------------NTDAAS 62
D Y + +G T+ V A+DKD G G + Y+++++
Sbjct: 792 DKTVYEVTLPENITVGQTVTHVHASDKDQGTNGFITYQIVNDFGGKFRVNRISGVVSVGD 851
Query: 63 YFNLDPATEHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
Y + + ++ IQ D + ST + + + DIND +P + P +F+V +D
Sbjct: 852 YLDYEEQEMYKIEIQAMDSSVDNQKVGSTHVI-VTLLDINDNSPIVK--PKKFNVTVQED 908
Query: 117 GL---AVGRVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLY 169
L V +HA+D D G + +S+PE F +D+ +G IR + LD+E++ Y
Sbjct: 909 LLVNAVVTSIHASDPDSGPGGEIEFSLPESTRKFNIDSKSGVIRLRQRLDFEQKSTY 965
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 29/171 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------- 68
S +Y +A + G +++QV A D DSG L+ Y + N + F +DP
Sbjct: 1107 STYYPVLAENLPS-GSSVVQVTAKDPDSGG-SLLRYTITKGN--EQNNFVIDPQSGLITT 1162
Query: 69 --------ATEHQGPIQ-DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ- 115
+E++ + +GG +S+ T +++TD ND PEF+ Y V Q
Sbjct: 1163 LRPLDREFKSEYKLTVSASDGGTPPVSTDVTFTVKITDENDNQPEFKEKQYVVGVFARQA 1222
Query: 116 --DGLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKAL 161
+ +V ATD D G NA + YS+ + D F++D+ +G+I TN +L
Sbjct: 1223 TSKSFGLYQVVATDEDIGSNADLRYSITKGNRDNKFIIDSRSGEIFTNVSL 1273
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 68/154 (44%), Gaps = 26/154 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNT---------------------DAASYFNLDPATE 71
+++V ATDKD+G G + Y + N ++ F+L A
Sbjct: 338 VLRVLATDKDAGSNGNIMYVITRGNELGKFEINSKTGQIYTKGDLDYESRQRFDLTVAAL 397
Query: 72 HQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADE 130
P+Q ST V + + D ND +PEF++ Y + E G +V V A D D
Sbjct: 398 DGVPLQSRK--ISTVPVVVNILDANDHDPEFKAPEYRKDLYEDLTPGTSVFTVSAEDLDS 455
Query: 131 GQNAVVYYSVP--EDIPFVVDANTGDIRTNKALD 162
G N V YS+ +PF ++ +TG IRT LD
Sbjct: 456 GGNGKVRYSLANLRPVPFEIEPDTGIIRTTTNLD 489
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L ST+ V I VTD ND PEF Y V E G V +V ATD D G NA + YS+
Sbjct: 3252 LRSTSYVRISVTDSNDNGPEFSEKRYSAKVDENSALGTFVLQVFATDRDSGTNAQIKYSI 3311
Query: 141 PED---IPFVVDANTGDIRTNKALDYEKQQLYLERV 173
E F + TG I+ + +D E+ Y +V
Sbjct: 3312 AEGNDAKKFKIVEETGVIKVSGDIDREEVASYRLKV 3347
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 75/174 (43%), Gaps = 25/174 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------- 67
Y A + ++G +++V A D DSG G+V Y L+ + F++D
Sbjct: 2761 YLASIPENIDIGSKVLRVFAEDLDSGSNGMVTYALVSKDKLVKEKFDIDQHTGWITTRGA 2820
Query: 68 ------PATEHQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E Q D G L+S TV V D+ND P+F + SV E G
Sbjct: 2821 LDREKQPSFEFQVRATDNGTTRLTSLTTVRAIVLDVNDTPPKFSQSEFMASVKEDALIGQ 2880
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+V + ATD D N +YY + P F ++ TG I + +LD E Y
Sbjct: 2881 SVTTITATDED--LNTELYYFILSGDPQARFGIERKTGVIFVHGSLDRESVGSY 2932
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPEDI 144
A V+++V D ND P F + PY + G G +G+ ATDAD G NA + Y +
Sbjct: 2019 AAVHVQVIDRNDNQPVFINSPYFIVLQLGVAQGTIIGQAQATDADIGSNANLRYDLIGGD 2078
Query: 145 P--FVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSYL 184
P F + TG++ + LD K + R+F + AT L
Sbjct: 2079 PGYFSISRKTGEVVVRRTLDDVK----VPRLFTLMVEATDGL 2116
Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVP---ED 143
+ + V D ND NPEF Y ++ E V RV ATD D G N + Y + E
Sbjct: 305 LRVNVLDENDNNPEFNQSRYITNLSELAPIHTPVLRVLATDKDAGSNGNIMYVITRGNEL 364
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLY 169
F +++ TG I T LDYE +Q +
Sbjct: 365 GKFEINSKTGQIYTKGDLDYESRQRF 390
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 72/175 (41%), Gaps = 24/175 (13%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------ 71
Y A + + ++ VKA D DSG + Y + N + ++F +D +
Sbjct: 2240 LYLATISESTPVDTAVVTVKAIDGDSGINKEINY-FIQNVSRVGAFFKIDKKSGVVFVAK 2298
Query: 72 ---------HQGPI--QDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSV-PEGQDG 117
H+ I DEG S T +RV D ND P F Y S+ G
Sbjct: 2299 SLDYESRVVHEMIIVAADEGKPSLTGETRVRVVLMDANDNAPRFDKSMYAASILGSASPG 2358
Query: 118 LAVGRVHATDADEGQNAVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLY 169
V R+ ATD DEG + YS+ F +D+ +G I ++ + ++ ++Y
Sbjct: 2359 QFVTRILATDPDEGDAKKLRYSITGGQGRQHFQIDSQSGVITLSRVVGIKQGKVY 2413
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE 142
VNI V D ND P F Y ++PE ++ R+ A DAD G N ++YYS E
Sbjct: 91 VNITVDDSNDNRPIFLKKKYLKTIPEDIPMHTSIARIEAVDADVGPNGLIYYSFKE 146
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 27/108 (25%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-- 76
Y A + LG ++QV ATD+DSG ++Y + + N DA + E G I
Sbjct: 3277 YSAKVDENSALGTFVLQVFATDRDSGTNAQIKYSIAEGN-DAKKF----KIVEETGVIKV 3331
Query: 77 ------------------QDEGGLSSTA--TVNIRVTDINDKNPEFQS 104
QD+G A V+I VTD+ND +PEF S
Sbjct: 3332 SGDIDREEVASYRLKVRAQDQGLPPQVADTVVDIEVTDVNDNSPEFSS 3379
Score = 38.9 bits (89), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 75/180 (41%), Gaps = 32/180 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-NTDAASYFNLDPATEHQGPIQ 77
Y A + ++G + VK D D+G G VEY ++ ++AS F ++ H G I
Sbjct: 1420 YRAHVAENSDVGTLVTTVK--DPDAGVNGEVEYCIVQTAKAESASLFKIE---SHSGRIL 1474
Query: 78 DEGGLS----STATVNIRVTD------------------INDKNPEFQSLPYEFSVP-EG 114
L + I+ +D +ND PEF S +E V
Sbjct: 1475 TVKPLDYETMQEHVLTIKASDRGIPKRETLFSVVVSVDDVNDHKPEFLSPLFESEVDVSA 1534
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLE 171
+ G A+ RV ATD D+G N+ + YS+ + VD N+G ++ L Q L+
Sbjct: 1535 KAGTAILRVIATDKDDGTNSKLKYSIVSGNTNKSLSVDQNSGVVKVAGRLSTLVHQYALK 1594
Score = 35.8 bits (81), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 68/164 (41%), Gaps = 25/164 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG---- 74
G + V ATD DSG + + Y + ++ DA F +D + E+
Sbjct: 2460 GTFVTMVSATDLDSGNYAHLTYSI--DSVDAMRKFRIDADSGMLYSRLMFDRENSSQAIM 2517
Query: 75 --PIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
PI+ D GG V + + D ND P F+ Y+ ++ G V A+D D
Sbjct: 2518 SVPIRATDGGGRFGFCVVEVHLIDENDNQPIFELKNYDTTISRSVTMGTPVLMTSASDPD 2577
Query: 130 EGQN-AVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYL 170
N A+ Y V P F ++A TG I+ ++ + + ++
Sbjct: 2578 ASSNAALTYVIVGHQTPPVFTINAATGVIQVSREPEVKSYNFFV 2621
>gi|328710949|ref|XP_001947627.2| PREDICTED: protocadherin-like wing polarity protein stan-like isoform
3 [Acyrthosiphon pisum]
Length = 3166
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 87/192 (45%), Gaps = 28/192 (14%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG 74
D+ Y A + +G T++ V ATD D G+ L+ Y L DA+ + G
Sbjct: 827 DNAPYTASIYEDAPVGSTVLVVSATDGDVGQNALITYSLASGYGDASEF----TINAQSG 882
Query: 75 PI-------------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
I +GG LS T V I +TDIND P+F + Y SV
Sbjct: 883 AIVTTKALDREVQSGYLLTVTARDGGNPPLSDTTDVEISITDINDNAPQFFNASYYGSVS 942
Query: 113 E-GQDGLAVGRVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYL 170
E G +V +V A+DAD G N + Y++ + + FV+D +G +RT +LD E Y
Sbjct: 943 EDALTGTSVLQVSASDADSGLNGRIKYALDDGVEAFVIDPTSGILRTAASLDRESIPQYN 1002
Query: 171 ERVFLISKFATS 182
VF I K + S
Sbjct: 1003 IHVFAIDKGSPS 1014
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GGLS TAT+ + VTD N+ P F + PY S+ E G V V ATD D GQNA++
Sbjct: 802 DSGGLSDTATIYVNVTDANNFAPIFDNAPYTASIYEDAPVGSTVLVVSATDGDVGQNALI 861
Query: 137 YYSVPEDI----PFVVDANTGDIRTNKALDYEKQQLYLERV 173
YS+ F ++A +G I T KALD E Q YL V
Sbjct: 862 TYSLASGYGDASEFTINAQSGAIVTTKALDREVQSGYLLTV 902
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 70/144 (48%), Gaps = 27/144 (18%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------ 71
+YG+++ D G +++QV A+D DSG G ++Y L D F +DP +
Sbjct: 937 YYGSVSEDALT-GTSVLQVSASDADSGLNGRIKYAL----DDGVEAFVIDPTSGILRTAA 991
Query: 72 ------------HQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD- 116
H I D+G LS+ V IR+ D+ND P F+S +PE
Sbjct: 992 SLDRESIPQYNIHVFAI-DKGSPSLSTAVPVTIRIEDVNDSPPVFESDKLVMYIPENSPI 1050
Query: 117 GLAVGRVHATDADEGQNAVVYYSV 140
G VG ++A D DEG NA+V YS+
Sbjct: 1051 GSTVGELYAKDPDEGPNAIVQYSI 1074
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 71/163 (43%), Gaps = 31/163 (19%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-----------------QD 78
+KATD D G +V Y ++ NT F++D + QD
Sbjct: 529 IKATDADQGLNAVVRYAIIGGNTQGQ--FSIDSQNGEVSLVKSLDYEAMRSYRLMIRAQD 586
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAV 135
G S+T + + V D+ND P F + ++ SV E G ++ RV A DADEG+NA
Sbjct: 587 GGNPSRSNTTQLLVNVKDVNDNPPRFYTSLFQESVLENVAVGYSIVRVQAYDADEGENAA 646
Query: 136 VYYSV---------PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ Y + E++P VD +G + T LD E Y
Sbjct: 647 LKYRIFPRDFEGTLAENLPITVDEKSGWVYTTHLLDRETNPKY 689
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 81/191 (42%), Gaps = 37/191 (19%)
Query: 14 SDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-----NTDAASYFNLD- 67
S S Y A R+ +G T++ ++ATD D G +EY + N+ A F +D
Sbjct: 390 SASGMYEASVRESVSVGTTIITIRATDLDIGVNSQIEYSIESISGGGINSSADETFGIDL 449
Query: 68 -----------------------PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQS 104
A++ P S+ A++ ++V D ND P+F
Sbjct: 450 RSGVVSVRRNLDREVCEVYTVMVKASDQAAPPSPR--RSAIASLVVKVLDDNDNYPQFSE 507
Query: 105 LPYEFSVPEG---QDGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTN 158
Y +V E + + ATDAD+G NAVV Y++ F +D+ G++
Sbjct: 508 RAYTANVAEDLNPNQRPVISTIKATDADQGLNAVVRYAIIGGNTQGQFSIDSQNGEVSLV 567
Query: 159 KALDYEKQQLY 169
K+LDYE + Y
Sbjct: 568 KSLDYEAMRSY 578
Score = 42.7 bits (99), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 13/100 (13%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLP--YEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS 139
++T T+ + V D ND +P F+S YE SV E G + + ATD D G N+ + YS
Sbjct: 369 TATTTLQVNVVDANDHSPVFESASGMYEASVRESVSVGTTIITIRATDLDIGVNSQIEYS 428
Query: 140 VPE----------DIPFVVDANTGDIRTNKALDYEKQQLY 169
+ D F +D +G + + LD E ++Y
Sbjct: 429 IESISGGGINSSADETFGIDLRSGVVSVRRNLDREVCEVY 468
Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 36/182 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL---------------------D 67
+G ++++V+A D D G+ ++YR+ + + NL +
Sbjct: 627 VGYSIVRVQAYDADEGENAALKYRIFPRDFEGTLAENLPITVDEKSGWVYTTHLLDRETN 686
Query: 68 PATEHQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
P + Q +D G S+TA+V + + D+ND P F Y+ + E G + V
Sbjct: 687 PKYQFQVVAEDGGDPPKSATASVVVTIQDVNDNEPIFHPKQYDVVISEDSPPGTPLTTVM 746
Query: 125 ATDADEGQNAVVYYSVPED-----IPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKF 179
ATD DE N ++Y + + G + + LDY++ E+ F++S
Sbjct: 747 ATDPDE--NPRLHYEIVSGNLRGRFAIATHSGKGLVTVAQPLDYKQ-----EKRFILSVT 799
Query: 180 AT 181
AT
Sbjct: 800 AT 801
>gi|229577125|ref|NP_001153302.1| cadherin-12 precursor [Danio rerio]
Length = 800
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 82/185 (44%), Gaps = 31/185 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G + Q+ ATD D +G R++ + YF++DP T
Sbjct: 166 YSASVPEMSPVGTYVTQITATDADDPTYG-NSARIVYSILHGQPYFSVDPKTGVIRVALP 224
Query: 71 --------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+Q IQ + GGL+ T T+NI + D+ND P F + VPE
Sbjct: 225 NMDREVKETYQVVIQAKDMGGQLGGLAGTTTINITLRDVNDNPPRFSKSIFHLRVPESSP 284
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQL 168
G +VGRV A D D G+NA V YS+ DI D G + K LD+E ++
Sbjct: 285 VGSSVGRVKAHDLDTGKNAEVEYSILPGDGGSMFDIYSNKDTQEGTVILKKRLDFETRKA 344
Query: 169 YLERV 173
Y +V
Sbjct: 345 YTFKV 349
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P F PY SVPE G V ++ ATDAD+ G +A + YS+ P
Sbjct: 149 IKVQDINDNEPRFLEGPYSASVPEMSPVGTYVTQITATDADDPTYGNSARIVYSILHGQP 208
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD TG IR +D E ++ Y
Sbjct: 209 YFSVDPKTGVIRVALPNMDREVKETY 234
>gi|395546164|ref|XP_003774961.1| PREDICTED: protocadherin-11 X-linked-like [Sarcophilus harrisii]
Length = 1268
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 79/159 (49%), Gaps = 20/159 (12%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNT---DAASYFNLDPATEHQGPI- 76
G L ++ ATDKDSGK G + Y L LDN T A + + ++ +
Sbjct: 482 GAQLTKLSATDKDSGKNGEITYLLAGEPPSAFSLDNRTGILTAVEQLDREMKDKYTFTVT 541
Query: 77 -QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--QDGLAVGRVHATDADEG 131
+D G L S ATV + V D ND +P F Y F VPE + G VG + TD D G
Sbjct: 542 ARDNGVPHLQSNATVTVTVLDQNDNSPTFTHSEYNFYVPENLPKHG-TVGLITITDPDAG 600
Query: 132 QNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLY 169
+N V+ ++ + F++D+ G IR N + D EKQ+ Y
Sbjct: 601 ENGVITLTIINNNGSFIIDSINGVIRPNISFDREKQESY 639
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY--- 138
SSTA + + V D+ND P FQ E ++PE G +V ++HATDAD G NA + Y
Sbjct: 230 SSTAILQVSVIDMNDNRPIFQETEVEVAIPENAPVGSSVYQLHATDADVGANARIQYFFS 289
Query: 139 ----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V + F ++ TG I + LD E+ ++
Sbjct: 290 NLMNQVARKL-FSLNNTTGLITVKEPLDREQAPIH 323
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
L+ST +V +++ D ND P F SVPE G + ++ ATD D G+N + Y
Sbjct: 445 SLNSTTSVFVKIRDENDNAPIFSQSSIGISVPENNAPGAQLTKLSATDKDSGKNGEITYL 504
Query: 140 VPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+ + P F +D TG + + LD E + Y
Sbjct: 505 LAGEPPSAFSLDNRTGILTAVEQLDREMKDKY 536
Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 19/130 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNN-------TDAASYFNLDPATEHQGP-----IQDE 79
T+ + TD D+G+ G++ +++NN + N+ E Q + +
Sbjct: 588 TVGLITITDPDAGENGVITLTIINNNGSFIIDSINGVIRPNISFDREKQESYTFVVMATD 647
Query: 80 GGL---SSTATVNIRVTDINDKNPEFQSLP----YEFSVPEGQDGLAVGRVHATDADEGQ 132
GG SS+A V I V DIND P F P +EF + G + V A D D G
Sbjct: 648 GGRVPRSSSAKVTINVVDINDNKPVFIFPPTNYTFEFVPLATEIGTLLYVVMAIDEDTGM 707
Query: 133 NAVVYYSVPE 142
NA + Y + E
Sbjct: 708 NAEIRYHIEE 717
>gi|148703591|gb|EDL35538.1| mCG141119 [Mus musculus]
Length = 4592
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 74/160 (46%), Gaps = 23/160 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG---- 74
G +MQV ATD D + Y L + A F L+P T E Q
Sbjct: 3043 GKLVMQVSATDADIRSNAEITYTLFGS---GAEKFKLNPDTGELRTLALLDREEQAVYNL 3099
Query: 75 --PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D GG S A + + + D+ND PEF + PY +V E + G + RV ATDAD G
Sbjct: 3100 LVKATDGGGRSCQAAIVLTLEDVNDNAPEFTAEPYTITVFENTEPGTPLTRVQATDADTG 3159
Query: 132 QNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
N + YS+ E D F ++ +G I+ K LD E Q +Y
Sbjct: 3160 LNRKISYSLVESADGQFSINERSGIIQLEKHLDRELQAVY 3199
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 79/155 (50%), Gaps = 22/155 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI-- 76
L ++QVKA+D+DSG + V Y ++++ Y N LD T + I
Sbjct: 2511 LHTLVVQVKASDRDSGIYSHVTYHIVNDFAKDRFYVNDRGQIFTLEKLDRETPAEKVISI 2570
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEG 131
+D GG + TVN+ +TD ND P+F+S YE ++ G +V +V A+DADEG
Sbjct: 2571 RLMAKDAGGKVAFCTVNVILTDDNDNAPQFRSTKYEVNIGSSAAKGTSVVKVFASDADEG 2630
Query: 132 QNAVVYYSVPEDIPFV-----VDANTGDIRTNKAL 161
NA V Y++ D V ++ TG I T ++L
Sbjct: 2631 SNADVTYAIEADSESVKENLEINKLTGLITTKESL 2665
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP- 141
++A V ++V N PEF Y+ S+ E G AV RV A D DEG+N V YS+
Sbjct: 446 ASARVVVKVLGTNSNPPEFTQTSYKASIDENAPIGAAVTRVSAMDPDEGENGYVTYSIAN 505
Query: 142 -EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSY 183
+PFV+D TG + T++ LDYE + RV+ + A+ +
Sbjct: 506 LNHVPFVIDHFTGTVSTSENLDYE----LMPRVYTLRIRASDW 544
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 87/178 (48%), Gaps = 33/178 (18%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
++ ++ DK E+ ++QV+ATDKD G G V Y +L TD F++D T
Sbjct: 828 YFVEVSEDK-EVNSEIIQVEATDKDLGPSGHVTYAIL---TDTEK-FSIDSMTGVVKIIQ 882
Query: 71 --------------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
E + +E L ST + + + D+ND P F +P +SV +D
Sbjct: 883 PLDREVQPVHYLKIEARDQATEEPRLFSTVLLKVSLDDVNDNPPRF--IPPNYSVKVRED 940
Query: 117 ---GLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
G + + A D D GQ++ V YS+ + + F VD +G +R + LD+EK+QLY
Sbjct: 941 LPEGTIIMWLEAYDPDVGQSSQVRYSLLDHGEGHFDVDKLSGAVRIVQQLDFEKKQLY 998
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 76/167 (45%), Gaps = 21/167 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--------TDAASYF---NLD 67
YGA + +G ++QV A +D + Y ++ N + + F +LD
Sbjct: 3239 YGASVSEDIVIGTEVLQVYAASRDIEANAEITYAIISGNEHGKFSIDSKTGAIFIIESLD 3298
Query: 68 PATEHQGPIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAV 120
+ H+ + E GG LS ATVNI VTDIND +P F Y V E V
Sbjct: 3299 YESSHEYYLTVEATDGGTPSLSDVATVNINVTDINDNSPVFSQDTYTTVVSEDAALEQPV 3358
Query: 121 GRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYE 164
+ A DAD N+ ++YS+ E PF +D G+++ K LD E
Sbjct: 3359 ITIMADDADGPSNSHIHYSIIEGNQGSPFTIDPVRGEVKVTKPLDRE 3405
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 77/169 (45%), Gaps = 33/169 (19%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ---------- 77
E G L +V+ATD D+G + Y L+++ A F+++ E G IQ
Sbjct: 3143 EPGTPLTRVQATDADTGLNRKISYSLVES---ADGQFSIN---ERSGIIQLEKHLDRELQ 3196
Query: 78 ----------DEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRV 123
D+G L++T TV + V DIND P F+ Y SV E G V +V
Sbjct: 3197 AVYTLTLKAVDQGLPRRLTATGTVVVSVLDINDNPPVFEYREYGASVSEDIVIGTEVLQV 3256
Query: 124 HATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+A D NA + Y++ E F +D+ TG I ++LDYE Y
Sbjct: 3257 YAASRDIEANAEITYAIISGNEHGKFSIDSKTGAIFIIESLDYESSHEY 3305
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVY 137
+G SS A V ++V D ND +P + Y ++PE G V +V ATDAD NA +
Sbjct: 3004 DGTFSSKARVEVKVLDANDNSPVCEKTSYSDTIPEDALPGKLVMQVSATDADIRSNAEIT 3063
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ F ++ +TG++RT LD E+Q +Y
Sbjct: 3064 YTLFGSGAEKFKLNPDTGELRTLALLDREEQAVY 3097
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 88 VNIRVTDINDKNPEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE---- 142
V+I+V D ND +P +S PYE F V G V ++ A+D D G N V YS+ +
Sbjct: 2799 VSIQVKDANDNSPVLESSPYEAFIVENLPGGSRVIQIRASDLDSGANGQVMYSLDQSQDA 2858
Query: 143 DI--PFVVDANTGDIRTNKALDYEKQQLYLERV 173
DI F ++ TG I T K LD+E++ Y +V
Sbjct: 2859 DIIESFAINMETGWITTLKELDHEERASYQIKV 2891
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 59/136 (43%), Gaps = 4/136 (2%)
Query: 37 KATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIN 96
KA + G F + R NT + D T ++ + A V ++V D N
Sbjct: 85 KAEEYVLGDFCFLRIRTKGGNTAILNREVRDHYTLIVKAVEKATDAEARAKVRVQVLDTN 144
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTG 153
D P F Y S+PE ++ RV ATDAD G N YYS + D+ F + +G
Sbjct: 145 DLRPLFSPTSYSVSLPENTAIRTSIARVSATDADIGTNGEFYYSFKDRTDV-FAIHPTSG 203
Query: 154 DIRTNKALDYEKQQLY 169
+ LD+ + QLY
Sbjct: 204 VVVLTGRLDFLETQLY 219
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 75/174 (43%), Gaps = 38/174 (21%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDA--------------------------ASY 63
G ++Q++A+D DSG G V Y L D + DA ASY
Sbjct: 2829 GSRVIQIRASDLDSGANGQVMYSL-DQSQDADIIESFAINMETGWITTLKELDHEERASY 2887
Query: 64 FNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
A++H +Q LSSTA V + VTD+ND P F + Y+ +V E G +
Sbjct: 2888 QIKVVASDHGEKVQ----LSSTAIVGVTVTDVNDSPPRFTAEIYKGTVSEDDPPGGVIAI 2943
Query: 123 VHATDAD--EGQNAVVYYSVPEDI--PFVVDANTGDIR--TNKALDYEKQQLYL 170
+ TDAD E V Y+ D F V+ D R K LD E++ YL
Sbjct: 2944 LSTTDADTEEINRQVSYFITGGDALGQFAVENVQSDWRVYVKKPLDREQKDSYL 2997
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 73/164 (44%), Gaps = 28/164 (17%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--FNLDPATE-------------HQGP 75
V ++Q+ A D+D K L+ L ++ D AS F LDPAT HQ
Sbjct: 1477 VEILQISAVDRDE-KNKLI--YTLQSSIDPASLKKFRLDPATGALYTAEKLDHEAIHQHV 1533
Query: 76 I------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+ QD + A + + V+D ND P F S Y+ V E G V +V A D
Sbjct: 1534 LTVMVRDQDVPVKRNFARIVVNVSDKNDHAPWFTSPSYDGRVYESAAVGSVVLQVTALDK 1593
Query: 129 DEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D+G+NA V YS+ F +D G I+T + LD Q Y
Sbjct: 1594 DKGRNAEVLYSIESGNIGNSFTIDPILGSIKTARELDRSHQVDY 1637
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 71/182 (39%), Gaps = 41/182 (22%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-- 76
Y A + +G + V A + S V Y + D N A FN++P H G I
Sbjct: 1676 YSAEISEAIRIGSFVGMVSAHSQSS-----VMYEIRDGNMGDA--FNINP---HSGSIIT 1725
Query: 77 ------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
+ GLS+ TV + V D ND P F Y + E
Sbjct: 1726 QRALDFETLPMYSLTVQGTNMAGLSTNTTVVVHVRDENDNPPVFTQAEYSGFISESASVN 1785
Query: 119 AVGR--------VHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQ 167
+V + ATDAD NA++ Y + E F +D TG IRT +LDYE+
Sbjct: 1786 SVVLTDRNVPLVIRATDADRESNALLVYQIVEPSVHNYFAIDPTTGAIRTVLSLDYEETH 1845
Query: 168 LY 169
+
Sbjct: 1846 AF 1847
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 35/179 (19%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-- 70
TS+ ++Y + + + V+++Q++A D DS + YR+ N +F++ P T
Sbjct: 1142 TSEPVYYPEIMENSPK-DVSVVQIEAFDPDSSSNDKLTYRITSGNPQG--FFSIHPKTGL 1198
Query: 71 --------------EH--QGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH + + D G S+ A V +++ D ND P+F Y+ +P
Sbjct: 1199 ITTTSRKLDREQQDEHILEVTVTDNGVPPRSTIARVIVKILDENDNRPQFLQKFYKIRLP 1258
Query: 113 EGQ--DG-------LAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNK 159
E + DG + RV A D DEG NA + YS+ E F ++ TG + + K
Sbjct: 1259 EREKADGDRSASKREPLYRVIAADKDEGPNAELSYSIEEGNEHGRFSIEPKTGVVSSKK 1317
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G + V+I V DIND P F Y ++ E G V +V ATD+D N + Y
Sbjct: 2266 GAHAEVFVDIIVEDINDNPPVFVQPSYSTTLSEASVIGTPVLQVRATDSDSEPNRGISYQ 2325
Query: 140 VPEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERVFL 175
+ + F +D+NTG I +ALDYE+ Q + R+F+
Sbjct: 2326 LIGNHSKSHDHFHIDSNTGLISLVRALDYEQSQQH--RIFV 2364
Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI 76
G ++ +G ++ + ATD DSG G + Y + N D S F +D T + P+
Sbjct: 724 GIEVKENLPVGANILFMNATDLDSGFNGKLVYAISGGNDD--SCFTIDMETGVLKVLSPL 781
Query: 77 QDEG-------------GLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
E G+ A +++ V D ND PEF Y V E ++
Sbjct: 782 DREVMDKYTLNITVYDLGIPQRAAWRLLDVTVLDANDNAPEFLQESYFVEVSEDKEVNSE 841
Query: 120 VGRVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ +V ATD D G + V Y++ D F +D+ TG ++ + LD E Q ++ ++
Sbjct: 842 IIQVEATDKDLGPSGHVTYAILTDTEKFSIDSMTGVVKIIQPLDREVQPVHYLKI 896
Score = 42.4 bits (98), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 26/174 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
+L Y A+ + E+G + V A D+DSG+ G + Y L +++ +F + P+
Sbjct: 2087 NLPYYAVVKVDAEVGHVIRYVTAIDRDSGRNGDIHYYLKEHH----DHFQIGPSGDISLK 2142
Query: 71 ---EHQG---------PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
EH +D G + +A V + +T +N P F+ Y +PE +
Sbjct: 2143 KQFEHDTLNKEYLVTVVAKDGGSPAFSAEVLVPITVMNKAMPVFEKAFYSAEIPENIQ-M 2201
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
VH A+ + V+YS+ + P F ++ NTG + LD+E Y
Sbjct: 2202 HSPVVH-IQANSPEGLKVFYSITDGDPFSQFTINFNTGVVNVIAPLDFESHPAY 2254
Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY 137
+G + V I+V D ND P+F + YE +VPE + + + ++ A D DE +N ++Y
Sbjct: 1437 DGTTTILTQVLIKVIDTNDHRPQFSTSKYEVAVPEDTEPEVEILQISAVDRDE-KNKLIY 1495
Query: 138 YSVPEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERVFL 175
P F +D TG + T + LD+E ++ V +
Sbjct: 1496 TLQSSIDPASLKKFRLDPATGALYTAEKLDHEAIHQHVLTVMV 1538
Score = 39.3 bits (90), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 23/160 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + +G ++QV+ATD DS + Y+L+ N++ + +F++D T
Sbjct: 2292 YSTTLSEASVIGTPVLQVRATDSDSEPNRGISYQLIGNHSKSHDHFHIDSNTGLISLVRA 2351
Query: 71 -------EHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
+H+ ++ +GG LSS V + VTD+ND P F+ YE + E G
Sbjct: 2352 LDYEQSQQHRIFVRAVDGGMPALSSDVVVTVAVTDLNDNPPLFEQQVYEARISEHAAHGH 2411
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
V V A DAD + YS+ + F++D TG I
Sbjct: 2412 FVMCVRACDADSSDLDKLEYSILSGNDHKSFIIDRETGII 2451
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 32/172 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDN-----------------------NTDAASYFNL 66
G ++M V A D+D+G+ G + Y + D + ++ S++ L
Sbjct: 1051 GSSVMTVSAHDEDTGRDGEIRYSIRDGSGIGVFRIDEETGKCVIETSDRLDRESTSHYWL 1110
Query: 67 DPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHA 125
QG + LSS V I V D+ND P+ Y + E ++V ++ A
Sbjct: 1111 TVYATDQGVVP----LSSFIEVYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEA 1166
Query: 126 TDADEGQNAVVYYSVPEDIP---FVVDANTGDI-RTNKALDYEKQQLYLERV 173
D D N + Y + P F + TG I T++ LD E+Q ++ V
Sbjct: 1167 FDPDSSSNDKLTYRITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILEV 1218
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 29/148 (19%)
Query: 34 MQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQGPI 76
+ ++ATD D L+ Y++++ + +YF +DP T +
Sbjct: 1796 LVIRATDADRESNALLVYQIVEPSVH--NYFAIDPTTGAIRTVLSLDYEETHAFHFTVQV 1853
Query: 77 QDEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFS--VPEGQDGLAVGRVHATDADE 130
D G A V + V DIND P F YE S +P + G+ V V+ATDAD
Sbjct: 1854 HDMGTPRLFAEYAANVTVHVIDINDCPPVFSKSLYEVSLLLPTYR-GVNVITVNATDADS 1912
Query: 131 GQNAVVYYSVPEDI---PFVVDANTGDI 155
+ V YS+ E F +D TG I
Sbjct: 1913 KAFSQVMYSITEGNIGEKFSMDHKTGTI 1940
Score = 36.2 bits (82), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 72/182 (39%), Gaps = 23/182 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF-------------- 64
Y A + G +M V+A D DS +EY +L N D S+
Sbjct: 2399 YEARISEHAAHGHFVMCVRACDADSSDLDKLEYSILSGN-DHKSFIIDRETGIITLSNLR 2457
Query: 65 --NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
L P + D G S+A VN+ V N +P F YE + E V
Sbjct: 2458 RHTLKPFYSLNVSVSD-GVFRSSARVNVTVMGGNLHSPVFHQNEYEVELAENAPLHTLVV 2516
Query: 122 RVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
+V A+D D G + V Y + D F V+ + G I T + LD E + + L++K
Sbjct: 2517 QVKASDRDSGIYSHVTYHIVNDFAKDRFYVN-DRGQIFTLEKLDRETPAEKVISIRLMAK 2575
Query: 179 FA 180
A
Sbjct: 2576 DA 2577
>gi|119625348|gb|EAX04943.1| dachsous 2 (Drosophila), isoform CRA_b [Homo sapiens]
gi|119625350|gb|EAX04945.1| dachsous 2 (Drosophila), isoform CRA_b [Homo sapiens]
Length = 2527
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 77/162 (47%), Gaps = 31/162 (19%)
Query: 35 QVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP------IQ 77
++ A D DSGK G + Y LL + +F ++P T EH+G +
Sbjct: 368 KITAIDMDSGKNGQLLYFLLSD----GKFFKMNPNTGELINWVALDREHRGHHEMTVLVT 423
Query: 78 DEGGLSSTAT--VNIRVTDINDKNPEF-QSLP---YEFSVPEGQD-GLAVGRVHATDADE 130
D G AT V + VTDIND P F Q LP V EGQ + V V A D DE
Sbjct: 424 DRGSPPRNATMAVYVSVTDINDNRPFFPQCLPGKELHVKVLEGQPVNMLVTTVFAKDPDE 483
Query: 131 GQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
G NA V YSV + F +DAN+G+IRT L Y+ + Y
Sbjct: 484 GNNAEVTYSVSSEDSSDHFKIDANSGEIRTTTILSYDYRPSY 525
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 31/184 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA-------- 69
F A ++ +G + + A D D G+ G V Y +L N + F LD +
Sbjct: 779 FPNAHVKEDVTVGSLVHHITAHDPDEGRNGKVTYSILSGNENMT--FMLDESSGLLTTTC 836
Query: 70 -------TEHQGPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
T+H + D+G LSS+ T+ + V D+ND+ P F+ YE SV E Q+ G
Sbjct: 837 PLDYEMKTQHILTVLALDDGTPALSSSQTLTVTVLDVNDEAPVFKQHLYEASVKENQNPG 896
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLE 171
V RV A D D G N+ + + + +P F ++++TG++ T LD E Q+++
Sbjct: 897 EFVTRVEALDRDSGVNSKLQFEI---MPGASFELFEINSDTGEVVTTTILDREIQEVFTL 953
Query: 172 RVFL 175
RV +
Sbjct: 954 RVLV 957
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 29/180 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------- 68
+L+Y + R+ E+G ++ + A DKD G G EY L D +A+ F +DP
Sbjct: 1091 TLYYQSSVREDAEVGTVVLVLSAVDKDEGLNGQTEYFLTD---EASGAFTIDPMSGTLKT 1147
Query: 69 ---------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYE-FSVP 112
A IQ G S+T + + VTD+ND +P + P++ F P
Sbjct: 1148 SNTLDREARSQHTFSAVARDCSIQ--GSRSTTVIIKVYVTDVNDNDPVLEQNPFDVFLSP 1205
Query: 113 EGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLE 171
E V A D D G N V +S E F +D TG+I+ + E ++L+
Sbjct: 1206 ESPTNQTTVIVRADDLDLGPNGTVVFSFAETQSMFSIDKYTGEIQFQQNPSSEYFPIWLQ 1265
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 81/175 (46%), Gaps = 27/175 (15%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA-------------SYF 64
Y A + ++QV ATD DSG GL+EY +L N + A +
Sbjct: 1402 IYQASVSESQLYNAHVIQVFATDLDSGLNGLIEYSILSGNQEEAFQIDALSGVITTKAIL 1461
Query: 65 NLDPATEHQGPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD---G 117
+ + + + +Q D+G LS+T + ++VTDIND P F LP E +V +D G
Sbjct: 1462 DYELTSSYSLIVQATDKGMPRLSNTTVIKVQVTDINDNAPAF--LPSE-AVEITEDSLPG 1518
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ V V D D +A ++ E P F +D NTG + K LD+E+ Y
Sbjct: 1519 VIVTHVSVHDVDLN-SAFIFSFAKESNPGTKFAIDQNTGVVVLVKTLDFEEMTEY 1572
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSG-----KFGLV---EYRLLDNNTDAASYFN---L 66
Y A ++ G + +V+A D+DSG +F ++ + L + N+D L
Sbjct: 884 LYEASVKENQNPGEFVTRVEALDRDSGVNSKLQFEIMPGASFELFEINSDTGEVVTTTIL 943
Query: 67 DPATEH----QGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
D + + ++D G LSST T+ V D ND PEF Y+ V E Q+ V
Sbjct: 944 DREIQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEFIVSSYDIEVLENQEPEVV 1003
Query: 121 GRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEK 165
V A+D D G N V Y + + D F ++ +G++ T +ALD E+
Sbjct: 1004 YTVLASDMDAGNNRAVEYHIIDGNTDECFTINEMSGELSTTRALDREQ 1051
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 25/189 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--TDAASY----FNLDPATE- 71
+ + + + T+ + A D D+G +G + Y ++ T SY F +DP T
Sbjct: 1930 FSCIVPENLPISSTICSINALDFDAGPYGELTYSIVSPCFLTHGMSYDHDLFLIDPLTGD 1989
Query: 72 -HQGPI---------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-G 114
H I +D+G +++ V + + I++ P F Y F++PE
Sbjct: 1990 IHAKQILDYENGNKYCLTVQAKDKGDATASLVVWVDIEGIDEFEPIFTQDQYFFTLPEKN 2049
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEKQQLYLERV 173
+D +GRV A+DAD G + V+ YS+ PF V+ G+I +AL K QL E
Sbjct: 2050 KDRQLIGRVEASDADAGIDGVILYSLGTSSPFFSVNKTNGNIYLIRALPLIKSQLNKEDT 2109
Query: 174 FLISKFATS 182
+ A S
Sbjct: 2110 LEMKIIAHS 2118
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
LSSTA ++I+V D+ND P F SL Y V E G + V A D D G +A + Y++
Sbjct: 1801 LSSTAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGSHITVVSANDRDTGSHAEIIYNI 1860
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEK 165
E F ++ NTG + K LDYEK
Sbjct: 1861 ISGNEKGHFYLEENTGVLYLIKPLDYEK 1888
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 30/156 (19%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------------- 82
V A+D D+G VEY ++D NTD N E G + L
Sbjct: 1006 VLASDMDAGNNRAVEYHIIDGNTDECFTIN-----EMSGELSTTRALDREQISNFTLVIL 1060
Query: 83 ---------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQ 132
SS + +RV D ND +P F +L Y+ SV E + G V + A D DEG
Sbjct: 1061 CSDLGDPPRSSVIHLQVRVLDANDHSPSFPTLYYQSSVREDAEVGTVVLVLSAVDKDEGL 1120
Query: 133 NAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQ 166
N Y + ++ F +D +G ++T+ LD E +
Sbjct: 1121 NGQTEYFLTDEASGAFTIDPMSGTLKTSNTLDREAR 1156
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---PED 143
T I + D+ND NP F S P + G V + A D DEG+N V YS+ E+
Sbjct: 761 TAQIVILDVNDHNPTFISFPNAHVKEDVTVGSLVHHITAHDPDEGRNGKVTYSILSGNEN 820
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
+ F++D ++G + T LDYE + ++ V +
Sbjct: 821 MTFMLDESSGLLTTTCPLDYEMKTQHILTVLAL 853
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 70/183 (38%), Gaps = 30/183 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF----------- 64
SL Y ++ LG + V A D+D+G + Y ++ N Y
Sbjct: 1823 SLSYHTHVKESTPLGSHITVVSANDRDTGSHAEIIYNIISGNEKGHFYLEENTGVLYLIK 1882
Query: 65 --NLDPATEHQGPIQD---EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
+ + T+ +Q E S A V + V D ND P+F + VPE
Sbjct: 1883 PLDYEKMTKFTLTVQASDAEKKHFSFAVVFVSVLDDNDHAPQFMFSSFSCIVPENLPISS 1942
Query: 119 AVGRVHATDADEGQNAVVYYSV------------PEDIPFVVDANTGDIRTNKALDYEKQ 166
+ ++A D D G + YS+ D+ F++D TGDI + LDYE
Sbjct: 1943 TICSINALDFDAGPYGELTYSIVSPCFLTHGMSYDHDL-FLIDPLTGDIHAKQILDYENG 2001
Query: 167 QLY 169
Y
Sbjct: 2002 NKY 2004
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 76 IQDEGGLSSTAT-VNIRVTDINDKNPEFQS----LPYEFS-VPEGQDGLAVGRVHATDAD 129
I ++G L + +T V +RV D ND +P F L E S VP+G +G++ A D D
Sbjct: 320 IPEDGFLQNVSTTVIVRVWDENDNSPTFLHDVLFLKVEESPVPQG----VIGKITAIDMD 375
Query: 130 EGQNA-VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQ 166
G+N ++Y+ + + F ++ NTG++ ALD E +
Sbjct: 376 SGKNGQLLYFLLSDGKFFKMNPNTGELINWVALDREHR 413
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPE 142
S+ VNI V D+ND +P F E + + G A+ A D D G+N ++ YS+
Sbjct: 117 SSTEVNITVMDVNDNHPAFLRTSDEIRISQTTPPGTALYLARAEDRDSGRNGLIRYSIAS 176
Query: 143 DIP--FVVDANTGDIRTNKALDYEKQQ 167
P F +D G + N +L +Q+
Sbjct: 177 PQPGVFAIDRALGVLFLNGSLGAGEQR 203
>gi|431918261|gb|ELK17488.1| Protocadherin-23 [Pteropus alecto]
Length = 3338
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 88/182 (48%), Gaps = 31/182 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA-------- 69
F A ++ +G + V A D D G+ G V Y +L N + A F LD +
Sbjct: 1614 FPIAHVKEDATVGSLVHHVTAQDPDEGRNGRVTYSILSGNENMA--FMLDESSGLLTTTC 1671
Query: 70 -------TEHQGPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
T+H +Q D G LSS+ T+ I V D+ND+ P F+ YE SV E ++ G
Sbjct: 1672 SLDYEIKTQHILTLQALDSGIPALSSSQTLTITVLDVNDETPAFKQHLYEASVKENRNPG 1731
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLE 171
V RV A D D G N+ + + + +P F ++ +TG + T LD E Q++++
Sbjct: 1732 EFVTRVEAVDRDSGTNSKLQFEI---MPGASFRLFEINPDTGVVVTTATLDREVQEVFIL 1788
Query: 172 RV 173
RV
Sbjct: 1789 RV 1790
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 24/169 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD--NNTDAASYFNLDP-------- 68
Y A + +G +QVKA+D D+G GL+EY L D + A F +DP
Sbjct: 657 YNATLAEHAPVGHCFLQVKASDADAGLNGLIEYSLYDGFQSYGAPQAFQIDPRDGQICVS 716
Query: 69 --ATEHQGP--------IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDG 117
+ P +D GGLS+ A V + + D+ND P F Y ++ + Q G
Sbjct: 717 QDIDREKDPDTYDLLVKARDGGGLSAQAFVRVELEDVNDNEPVFNPSTYATTISSQTQSG 776
Query: 118 LAVGRVHATDADEGQNAVVYYS-VPEDIP--FVVDANTGDIRTNKALDY 163
+ V ATD D G + V Y +P D+ F +D+ TG I L +
Sbjct: 777 TEIVHVLATDRDSGIHGTVTYELLPSDLSSLFTIDSPTGIIYLTSTLSH 825
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 78/170 (45%), Gaps = 33/170 (19%)
Query: 35 QVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ------ 77
++ A D+D GK G + Y LL + +F ++P T EHQ Q
Sbjct: 1203 KITAIDRDLGKNGQLSYFLLSD----GKFFKMNPHTGEVISWVALDHEHQVQHQLTVLVT 1258
Query: 78 DEGGLSSTAT--VNIRVTDINDKNPEF-QSLP---YEFSVPEGQD-GLAVGRVHATDADE 130
D G AT V + V DIND P F Q LP V EGQ + V V A D DE
Sbjct: 1259 DHGSPPRNATMVVYVSVADINDNRPYFPQCLPGKELHIKVLEGQPVNMLVTTVFAKDLDE 1318
Query: 131 GQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
G NA V Y S F +DAN+G+IRT L Y+ + Y R+ +I+
Sbjct: 1319 GNNAEVTYSVSSEDSSDDFKIDANSGEIRTTTILLYDYRPSY--RITVIA 1366
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 73/174 (41%), Gaps = 25/174 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y + H ++QV ATD DSG GL+EY +L N A F++D +
Sbjct: 2238 IYQVSVSEGHFYNAHVVQVFATDLDSGLNGLIEYSILSGNQGEA--FHIDALSGEITADG 2295
Query: 71 ----EH--------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
EH Q + LS T V I+VTD+ND P F L G+
Sbjct: 2296 ILDYEHICSYSLIVQATDKGMPRLSGTTVVKIQVTDVNDNAPTFLPLEAVEIAENSLPGV 2355
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
V R+ D D +A ++ E P F +D NTG + K LD+E+ Y
Sbjct: 2356 IVTRISVHDVDL-NSAFIFSFSKESNPGTKFAIDRNTGVVVLVKTLDFEEATEY 2408
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 74/173 (42%), Gaps = 31/173 (17%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL-- 82
+ E GV + V A+D D+G G VEY ++D NT YF ++ E G + L
Sbjct: 1831 ENQEPGV-VYTVLASDMDAGTNGAVEYHIIDGNT--GEYFAIN---ETSGELSTTHALDR 1884
Query: 83 --------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
SS + +RV D ND +P F L Y+ SV E Q G V
Sbjct: 1885 EQVNSFALVILCSDLGDPPRSSIVQLQVRVLDDNDHSPFFPVLHYQSSVREDAQVGTVVL 1944
Query: 122 RVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLER 172
+ A D DEG N Y + ++ F +D G +R ALD E + + R
Sbjct: 1945 VLSAVDKDEGLNGQTEYFLTDEASGAFTIDPVAGTLRIGHALDREARSQHTFR 1997
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 80/171 (46%), Gaps = 22/171 (12%)
Query: 14 SDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA------------ 61
S L+ GA+ + E G +++ VKA DS + ++Y + N D A
Sbjct: 2132 SHHLYKGAVMENC-EAGTSIVTVKALALDSIQDS-IKYSIFSGNEDGAFSLCSNSGELTV 2189
Query: 62 ---SYFNLDPATEHQGPIQDEG-GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG 117
+ + + E Q + E G + + V I + D+ND P F+ Y+ SV EG
Sbjct: 2190 KEPKFLDFEVRKEVQLIVLAESSGHRAYSKVAILILDMNDNLPHFEQSIYQVSVSEGHFY 2249
Query: 118 LA-VGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
A V +V ATD D G N ++ YS+ + F +DA +G+I + LDYE
Sbjct: 2250 NAHVVQVFATDLDSGLNGLIEYSILSGNQGEAFHIDALSGEITADGILDYE 2300
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 78/185 (42%), Gaps = 32/185 (17%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---- 70
+++ Y A ++ LG + V A+D D G + Y ++ N +F+L+ T
Sbjct: 2658 NTVKYHAHVKESTPLGSHITVVSASDCDVGSHAEILYHIISGNEKG--HFHLEEKTGVLY 2715
Query: 71 -----EHQGPIQ---------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+++ I+ +E S A V + V D ND P+F VPE
Sbjct: 2716 LIKPLDYEETIKFTLTIQASDEEKKHFSFAVVFVSVLDDNDHAPQFMFSSLNCVVPENLP 2775
Query: 117 GLA-VGRVHATDADEGQNAVVYYSV-----------PEDIPFVVDANTGDIRTNKALDYE 164
+ + V+A D D G + YS+ P+ PF++D TGDI + LDYE
Sbjct: 2776 VFSTICSVNALDFDAGPYGELTYSILSPCSIMHGVPPDQEPFLIDPLTGDIHAKQVLDYE 2835
Query: 165 KQQLY 169
K Y
Sbjct: 2836 KDNKY 2840
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 12/127 (9%)
Query: 46 FGLVEYRLLDNNTD---AASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEF 102
F V Y +L +N D +AS+ + A++H P LSSTA V+I V D+ND P+F
Sbjct: 2603 FKQVGYLVLLHNLDRETSASHKLVILASDHGCP-----PLSSTAIVSIEVLDVNDNPPKF 2657
Query: 103 QSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTN 158
++ Y V E G + V A+D D G +A + Y + E F ++ TG +
Sbjct: 2658 NTVKYHAHVKESTPLGSHITVVSASDCDVGSHAEILYHIISGNEKGHFHLEEKTGVLYLI 2717
Query: 159 KALDYEK 165
K LDYE+
Sbjct: 2718 KPLDYEE 2724
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 74/177 (41%), Gaps = 30/177 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-- 76
Y + + G ++ V ATD+DSG G V Y LL +D +S F +D T G I
Sbjct: 765 YATTISSQTQSGTEIVHVLATDRDSGIHGTVTYELLP--SDLSSLFTIDSPT---GIIYL 819
Query: 77 ------------------QDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
QD GGL+S A + I + EF+ Y FSV E
Sbjct: 820 TSTLSHLESTTLTLAVRAQDGGGLTSVINANITIHILQTTLAPSEFERPKYTFSVYEDAP 879
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYL 170
+ VG V A ++ V Y ++ F + G IRT K LD+E Q +++
Sbjct: 880 EDSPVGTVKAKESLNYSEPVFYRISSGNLQGKFSIHPWLGTIRTQKPLDHETQPMFV 936
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 25/165 (15%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------- 68
L Y + R+ ++G ++ + A DKD G G EY L D +A+ F +DP
Sbjct: 1927 LHYQSSVREDAQVGTVVLVLSAVDKDEGLNGQTEYFLTD---EASGAFTIDPVAGTLRIG 1983
Query: 69 -ATEHQGPIQD-----------EGGLSSTATVNIRVTDINDKNPEFQSLPYE-FSVPEGQ 115
A + + Q +G S+TA + + +TD+ND +P + P++ F +
Sbjct: 1984 HALDREARSQHTFRAVARDCSIQGSRSTTAIILVHITDVNDNDPVLEQNPFDIFISSQSP 2043
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNK 159
+ A D D G N V +S + F ++ TG+I+ +
Sbjct: 2044 TNQTTAILRANDPDLGPNGTVTFSFAQTQSMFSINKYTGEIQLQQ 2088
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---PEDIPF 146
+ + D+ND +P+F S P + G V V A D DEG+N V YS+ E++ F
Sbjct: 1599 VVILDVNDHSPKFVSFPIAHVKEDATVGSLVHHVTAQDPDEGRNGRVTYSILSGNENMAF 1658
Query: 147 VVDANTGDIRTNKALDYEKQQLYL 170
++D ++G + T +LDYE + ++
Sbjct: 1659 MLDESSGLLTTTCSLDYEIKTQHI 1682
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 20/168 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSG-----KFGLV---EYRLLDNNTDAA---SYFNL 66
Y A ++ G + +V+A D+DSG +F ++ +RL + N D + L
Sbjct: 1719 LYEASVKENRNPGEFVTRVEAVDRDSGTNSKLQFEIMPGASFRLFEINPDTGVVVTTATL 1778
Query: 67 DPATEH----QGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
D + + ++D G LS T T+ V D ND PE ++ V E Q+ V
Sbjct: 1779 DREVQEVFILRVRVRDGGVPSLSGTTTILCTVEDENDHAPEIIVPIHDIEVLENQEPGVV 1838
Query: 121 GRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEK 165
V A+D D G N V Y + + F ++ +G++ T ALD E+
Sbjct: 1839 YTVLASDMDAGTNGAVEYHIIDGNTGEYFAINETSGELSTTHALDREQ 1886
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPE 142
S+ VNI V D+ND P F E + + G A+ R HA D D G N V+ YS+
Sbjct: 950 SSTEVNITVIDVNDNYPVFLRASDEIKISQITLPGTALYRAHAEDKDSGWNGVIRYSIAS 1009
Query: 143 DIP--FVVDANTGDIRTNKAL 161
P F +D+ G + N +L
Sbjct: 1010 QDPNVFSIDSGLGVVYLNGSL 1030
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 25/155 (16%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASY------FNLDPATE--HQGPI------- 76
T+ V A D D+G +G + Y +L + F +DP T H +
Sbjct: 2779 TICSVNALDFDAGPYGELTYSILSPCSIMHGVPPDQEPFLIDPLTGDIHAKQVLDYEKDN 2838
Query: 77 --------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D G +++ V + + ++ P F Y F++PE + +GRV A+D
Sbjct: 2839 KYCLIVQAKDRGDSTASLMVWVDIEGTDEFEPIFTQDQYFFNLPEKNNIRQLIGRVEASD 2898
Query: 128 ADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKAL 161
AD G + V+ YS+ PF V+ G+I +AL
Sbjct: 2899 ADAGIDGVILYSLETPSPFFSVNKTNGNIYLTRAL 2933
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 40/98 (40%), Gaps = 16/98 (16%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV-PEDIP 145
V +RV D ND P F+ Y +V E G V RV A D D G N V Y + P
Sbjct: 275 VELRVLDENDNPPVFEQGEYRAAVREDAPPGTEVCRVRAADRDLGPNGHVRYRIRARQTP 334
Query: 146 --------------FVVDANTGDIRTNKALDYEKQQLY 169
F V+ +G +R + LD E Q +
Sbjct: 335 GAGSGSEALGDAAYFAVEELSGVVRVQRPLDREVQAWH 372
Score = 36.2 bits (82), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 55/148 (37%), Gaps = 40/148 (27%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA----------ASYF---N 65
Y A R+ G + +V+A D+D G G V YR+ T A+YF
Sbjct: 294 YRAAVREDAPPGTEVCRVRAADRDLGPNGHVRYRIRARQTPGAGSGSEALGDAAYFAVEE 353
Query: 66 LDPATEHQGPIQDE-------------GGLS---STATVNIRVTDINDKNPEFQSLPYEF 109
L Q P+ E GG +T V+I V D+ND P L F
Sbjct: 354 LSGVVRVQRPLDREVQAWHQLVVEARDGGAEPEVATVRVSIAVLDVNDNRPAIHLL---F 410
Query: 110 SVPEG--------QDGLAVGRVHATDAD 129
EG + G V RV +DAD
Sbjct: 411 LTEEGAACVSEGARPGDYVARVSVSDAD 438
>gi|157951641|ref|NP_001074755.2| FAT tumor suppressor homolog 1 precursor [Mus musculus]
Length = 4590
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 74/160 (46%), Gaps = 23/160 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG---- 74
G +MQV ATD D + Y L + A F L+P T E Q
Sbjct: 3041 GKLVMQVSATDADIRSNAEITYTLFGS---GAEKFKLNPDTGELRTLALLDREEQAVYNL 3097
Query: 75 --PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D GG S A + + + D+ND PEF + PY +V E + G + RV ATDAD G
Sbjct: 3098 LVKATDGGGRSCQAAIVLTLEDVNDNAPEFTAEPYTITVFENTEPGTPLTRVQATDADTG 3157
Query: 132 QNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
N + YS+ E D F ++ +G I+ K LD E Q +Y
Sbjct: 3158 LNRKISYSLVESADGQFSINERSGIIQLEKHLDRELQAVY 3197
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 79/155 (50%), Gaps = 22/155 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI-- 76
L ++QVKA+D+DSG + V Y ++++ Y N LD T + I
Sbjct: 2509 LHTLVVQVKASDRDSGIYSHVTYHIVNDFAKDRFYVNDRGQIFTLEKLDRETPAEKVISI 2568
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEG 131
+D GG + TVN+ +TD ND P+F+S YE ++ G +V +V A+DADEG
Sbjct: 2569 RLMAKDAGGKVAFCTVNVILTDDNDNAPQFRSTKYEVNIGSSAAKGTSVVKVFASDADEG 2628
Query: 132 QNAVVYYSVPEDIPFV-----VDANTGDIRTNKAL 161
NA V Y++ D V ++ TG I T ++L
Sbjct: 2629 SNADVTYAIEADSESVKENLEINKLTGLITTKESL 2663
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP- 141
++A V ++V N PEF Y+ S+ E G AV RV A D DEG+N V YS+
Sbjct: 446 ASARVVVKVLGTNSNPPEFTQTSYKASIDENAPIGAAVTRVSAMDPDEGENGYVTYSIAN 505
Query: 142 -EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSY 183
+PFV+D TG + T++ LDYE + RV+ + A+ +
Sbjct: 506 LNHVPFVIDHFTGTVSTSENLDYE----LMPRVYTLRIRASDW 544
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 87/178 (48%), Gaps = 33/178 (18%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
++ ++ DK E+ ++QV+ATDKD G G V Y +L TD F++D T
Sbjct: 828 YFVEVSEDK-EVNSEIIQVEATDKDLGPSGHVTYAIL---TDTEK-FSIDSMTGVVKIIQ 882
Query: 71 --------------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
E + +E L ST + + + D+ND P F +P +SV +D
Sbjct: 883 PLDREVQPVHYLKIEARDQATEEPRLFSTVLLKVSLDDVNDNPPRF--IPPNYSVKVRED 940
Query: 117 ---GLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
G + + A D D GQ++ V YS+ + + F VD +G +R + LD+EK+QLY
Sbjct: 941 LPEGTIIMWLEAYDPDVGQSSQVRYSLLDHGEGHFDVDKLSGAVRIVQQLDFEKKQLY 998
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 76/167 (45%), Gaps = 21/167 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--------TDAASYF---NLD 67
YGA + +G ++QV A +D + Y ++ N + + F +LD
Sbjct: 3237 YGASVSEDIVIGTEVLQVYAASRDIEANAEITYAIISGNEHGKFSIDSKTGAIFIIESLD 3296
Query: 68 PATEHQGPIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAV 120
+ H+ + E GG LS ATVNI VTDIND +P F Y V E V
Sbjct: 3297 YESSHEYYLTVEATDGGTPSLSDVATVNINVTDINDNSPVFSQDTYTTVVSEDAALEQPV 3356
Query: 121 GRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYE 164
+ A DAD N+ ++YS+ E PF +D G+++ K LD E
Sbjct: 3357 ITIMADDADGPSNSHIHYSIIEGNQGSPFTIDPVRGEVKVTKPLDRE 3403
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 77/169 (45%), Gaps = 33/169 (19%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ---------- 77
E G L +V+ATD D+G + Y L+++ A F+++ E G IQ
Sbjct: 3141 EPGTPLTRVQATDADTGLNRKISYSLVES---ADGQFSIN---ERSGIIQLEKHLDRELQ 3194
Query: 78 ----------DEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRV 123
D+G L++T TV + V DIND P F+ Y SV E G V +V
Sbjct: 3195 AVYTLTLKAVDQGLPRRLTATGTVVVSVLDINDNPPVFEYREYGASVSEDIVIGTEVLQV 3254
Query: 124 HATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+A D NA + Y++ E F +D+ TG I ++LDYE Y
Sbjct: 3255 YAASRDIEANAEITYAIISGNEHGKFSIDSKTGAIFIIESLDYESSHEY 3303
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVY 137
+G SS A V ++V D ND +P + Y ++PE G V +V ATDAD NA +
Sbjct: 3002 DGTFSSKARVEVKVLDANDNSPVCEKTSYSDTIPEDALPGKLVMQVSATDADIRSNAEIT 3061
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ F ++ +TG++RT LD E+Q +Y
Sbjct: 3062 YTLFGSGAEKFKLNPDTGELRTLALLDREEQAVY 3095
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 88 VNIRVTDINDKNPEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE---- 142
V+I+V D ND +P +S PYE F V G V ++ A+D D G N V YS+ +
Sbjct: 2797 VSIQVKDANDNSPVLESSPYEAFIVENLPGGSRVIQIRASDLDSGANGQVMYSLDQSQDA 2856
Query: 143 DI--PFVVDANTGDIRTNKALDYEKQQLYLERV 173
DI F ++ TG I T K LD+E++ Y +V
Sbjct: 2857 DIIESFAINMETGWITTLKELDHEERASYQIKV 2889
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 59/136 (43%), Gaps = 4/136 (2%)
Query: 37 KATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIN 96
KA + G F + R NT + D T ++ + A V ++V D N
Sbjct: 85 KAEEYVLGDFCFLRIRTKGGNTAILNREVRDHYTLIVKAVEKATDAEARAKVRVQVLDTN 144
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTG 153
D P F Y S+PE ++ RV ATDAD G N YYS + D+ F + +G
Sbjct: 145 DLRPLFSPTSYSVSLPENTAIRTSIARVSATDADIGTNGEFYYSFKDRTDV-FAIHPTSG 203
Query: 154 DIRTNKALDYEKQQLY 169
+ LD+ + QLY
Sbjct: 204 VVVLTGRLDFLETQLY 219
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 75/174 (43%), Gaps = 38/174 (21%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDA--------------------------ASY 63
G ++Q++A+D DSG G V Y L D + DA ASY
Sbjct: 2827 GSRVIQIRASDLDSGANGQVMYSL-DQSQDADIIESFAINMETGWITTLKELDHEERASY 2885
Query: 64 FNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
A++H +Q LSSTA V + VTD+ND P F + Y+ +V E G +
Sbjct: 2886 QIKVVASDHGEKVQ----LSSTAIVGVTVTDVNDSPPRFTAEIYKGTVSEDDPPGGVIAI 2941
Query: 123 VHATDAD--EGQNAVVYYSVPEDI--PFVVDANTGDIR--TNKALDYEKQQLYL 170
+ TDAD E V Y+ D F V+ D R K LD E++ YL
Sbjct: 2942 LSTTDADTEEINRQVSYFITGGDALGQFAVENVQSDWRVYVKKPLDREQKDSYL 2995
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 73/164 (44%), Gaps = 28/164 (17%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--FNLDPATE-------------HQGP 75
V ++Q+ A D+D K L+ L ++ D AS F LDPAT HQ
Sbjct: 1475 VEILQISAVDRDE-KNKLI--YTLQSSIDPASLKKFRLDPATGALYTAEKLDHEAIHQHV 1531
Query: 76 I------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+ QD + A + + V+D ND P F S Y+ V E G V +V A D
Sbjct: 1532 LTVMVRDQDVPVKRNFARIVVNVSDKNDHAPWFTSPSYDGRVYESAAVGSVVLQVTALDK 1591
Query: 129 DEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D+G+NA V YS+ F +D G I+T + LD Q Y
Sbjct: 1592 DKGRNAEVLYSIESGNIGNSFTIDPILGSIKTARELDRSHQVDY 1635
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 71/182 (39%), Gaps = 41/182 (22%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-- 76
Y A + +G + V A + S V Y + D N A FN++P H G I
Sbjct: 1674 YSAEISEAIRIGSFVGMVSAHSQSS-----VMYEIRDGNMGDA--FNINP---HSGSIIT 1723
Query: 77 ------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
+ GLS+ TV + V D ND P F Y + E
Sbjct: 1724 QRALDFETLPMYSLTVQGTNMAGLSTNTTVVVHVRDENDNPPVFTQAEYSGFISESASVN 1783
Query: 119 AVGR--------VHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQ 167
+V + ATDAD NA++ Y + E F +D TG IRT +LDYE+
Sbjct: 1784 SVVLTDRNVPLVIRATDADRESNALLVYQIVEPSVHNYFAIDPTTGAIRTVLSLDYEETH 1843
Query: 168 LY 169
+
Sbjct: 1844 AF 1845
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 35/179 (19%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-- 70
TS+ ++Y + + + V+++Q++A D DS + YR+ N +F++ P T
Sbjct: 1140 TSEPVYYPEIMENSPK-DVSVVQIEAFDPDSSSNDKLTYRITSGNPQG--FFSIHPKTGL 1196
Query: 71 --------------EH--QGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH + + D G S+ A V +++ D ND P+F Y+ +P
Sbjct: 1197 ITTTSRKLDREQQDEHILEVTVTDNGVPPRSTIARVIVKILDENDNRPQFLQKFYKIRLP 1256
Query: 113 EGQ--DG-------LAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNK 159
E + DG + RV A D DEG NA + YS+ E F ++ TG + + K
Sbjct: 1257 EREKADGDRSASKREPLYRVIAADKDEGPNAELSYSIEEGNEHGRFSIEPKTGVVSSKK 1315
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G + V+I V DIND P F Y ++ E G V +V ATD+D N + Y
Sbjct: 2264 GAHAEVFVDIIVEDINDNPPVFVQPSYSTTLSEASVIGTPVLQVRATDSDSEPNRGISYQ 2323
Query: 140 VPEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERVFL 175
+ + F +D+NTG I +ALDYE+ Q + R+F+
Sbjct: 2324 LIGNHSKSHDHFHIDSNTGLISLVRALDYEQSQQH--RIFV 2362
Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI 76
G ++ +G ++ + ATD DSG G + Y + N D S F +D T + P+
Sbjct: 724 GIEVKENLPVGANILFMNATDLDSGFNGKLVYAISGGNDD--SCFTIDMETGVLKVLSPL 781
Query: 77 QDEG-------------GLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
E G+ A +++ V D ND PEF Y V E ++
Sbjct: 782 DREVMDKYTLNITVYDLGIPQRAAWRLLDVTVLDANDNAPEFLQESYFVEVSEDKEVNSE 841
Query: 120 VGRVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ +V ATD D G + V Y++ D F +D+ TG ++ + LD E Q ++ ++
Sbjct: 842 IIQVEATDKDLGPSGHVTYAILTDTEKFSIDSMTGVVKIIQPLDREVQPVHYLKI 896
Score = 42.4 bits (98), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 26/174 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
+L Y A+ + E+G + V A D+DSG+ G + Y L +++ +F + P+
Sbjct: 2085 NLPYYAVVKVDAEVGHVIRYVTAIDRDSGRNGDIHYYLKEHH----DHFQIGPSGDISLK 2140
Query: 71 ---EHQG---------PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
EH +D G + +A V + +T +N P F+ Y +PE +
Sbjct: 2141 KQFEHDTLNKEYLVTVVAKDGGSPAFSAEVLVPITVMNKAMPVFEKAFYSAEIPENIQ-M 2199
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
VH A+ + V+YS+ + P F ++ NTG + LD+E Y
Sbjct: 2200 HSPVVH-IQANSPEGLKVFYSITDGDPFSQFTINFNTGVVNVIAPLDFESHPAY 2252
Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY 137
+G + V I+V D ND P+F + YE +VPE + + + ++ A D DE +N ++Y
Sbjct: 1435 DGTTTILTQVLIKVIDTNDHRPQFSTSKYEVAVPEDTEPEVEILQISAVDRDE-KNKLIY 1493
Query: 138 YSVPEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERVFL 175
P F +D TG + T + LD+E ++ V +
Sbjct: 1494 TLQSSIDPASLKKFRLDPATGALYTAEKLDHEAIHQHVLTVMV 1536
Score = 39.3 bits (90), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 23/160 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + +G ++QV+ATD DS + Y+L+ N++ + +F++D T
Sbjct: 2290 YSTTLSEASVIGTPVLQVRATDSDSEPNRGISYQLIGNHSKSHDHFHIDSNTGLISLVRA 2349
Query: 71 -------EHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
+H+ ++ +GG LSS V + VTD+ND P F+ YE + E G
Sbjct: 2350 LDYEQSQQHRIFVRAVDGGMPALSSDVVVTVAVTDLNDNPPLFEQQVYEARISEHAAHGH 2409
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
V V A DAD + YS+ + F++D TG I
Sbjct: 2410 FVMCVRACDADSSDLDKLEYSILSGNDHKSFIIDRETGII 2449
Score = 38.9 bits (89), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 30/170 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDN---------------------NTDAASYFNLDP 68
G ++M V A D+D+G+ G + Y + D + ++ S++ L
Sbjct: 1051 GSSVMTVSAHDEDTGRDGEIRYSIRDGSGIGVFRIDEETGVIETSDRLDRESTSHYWLTV 1110
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
QG + LSS V I V D+ND P+ Y + E ++V ++ A D
Sbjct: 1111 YATDQGVVP----LSSFIEVYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAFD 1166
Query: 128 ADEGQNAVVYYSVPEDIP---FVVDANTGDI-RTNKALDYEKQQLYLERV 173
D N + Y + P F + TG I T++ LD E+Q ++ V
Sbjct: 1167 PDSSSNDKLTYRITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILEV 1216
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 29/148 (19%)
Query: 34 MQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQGPI 76
+ ++ATD D L+ Y++++ + +YF +DP T +
Sbjct: 1794 LVIRATDADRESNALLVYQIVEPSVH--NYFAIDPTTGAIRTVLSLDYEETHAFHFTVQV 1851
Query: 77 QDEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFS--VPEGQDGLAVGRVHATDADE 130
D G A V + V DIND P F YE S +P + G+ V V+ATDAD
Sbjct: 1852 HDMGTPRLFAEYAANVTVHVIDINDCPPVFSKSLYEVSLLLPTYR-GVNVITVNATDADS 1910
Query: 131 GQNAVVYYSVPEDI---PFVVDANTGDI 155
+ V YS+ E F +D TG I
Sbjct: 1911 KAFSQVMYSITEGNIGEKFSMDHKTGTI 1938
Score = 36.2 bits (82), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 72/182 (39%), Gaps = 23/182 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF-------------- 64
Y A + G +M V+A D DS +EY +L N D S+
Sbjct: 2397 YEARISEHAAHGHFVMCVRACDADSSDLDKLEYSILSGN-DHKSFIIDRETGIITLSNLR 2455
Query: 65 --NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
L P + D G S+A VN+ V N +P F YE + E V
Sbjct: 2456 RHTLKPFYSLNVSVSD-GVFRSSARVNVTVMGGNLHSPVFHQNEYEVELAENAPLHTLVV 2514
Query: 122 RVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
+V A+D D G + V Y + D F V+ + G I T + LD E + + L++K
Sbjct: 2515 QVKASDRDSGIYSHVTYHIVNDFAKDRFYVN-DRGQIFTLEKLDRETPAEKVISIRLMAK 2573
Query: 179 FA 180
A
Sbjct: 2574 DA 2575
>gi|47229646|emb|CAG06842.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2982
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 82/180 (45%), Gaps = 26/180 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y R+ E+G ++ V+ATD D+ G + YR+++ N + F +D +
Sbjct: 274 YKENIRENLEIGYEVLTVRATDGDAPVNGNILYRIINGN-GSNDVFEIDSRSGVIRTRGL 332
Query: 71 -------------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-D 116
E +D G S+TATV+I V D ND P+F Y VPE
Sbjct: 333 VDREQVEAYMLLVEANDQGRDPGPRSATATVHIVVEDDNDNAPQFSEKRYVVQVPEDMAP 392
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ +V ATD D G NAVV++S+ F +DA TG + LDYE + Y R+
Sbjct: 393 NTEILQVTATDEDRGSNAVVHFSIMSGNTRGQFYIDAQTGKMDLVSHLDYEANKEYTLRI 452
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 22/159 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNT-------------DAASYFNLDPATEHQGPIQDE 79
++QV ATD+D G +V + ++ NT D S+ + + E+ I+ +
Sbjct: 396 ILQVTATDEDRGSNAVVHFSIMSGNTRGQFYIDAQTGKMDLVSHLDYEANKEYTLRIRAQ 455
Query: 80 GG----LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
G LS+ + V ++V D+ND P F S P++ +V E G ++ + A DAD G N
Sbjct: 456 DGGRPPLSNISGLVTVQVLDVNDNAPIFVSTPFQATVLENVPLGYSIIHIQAVDADSGDN 515
Query: 134 AVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ + Y S + PF ++ +TG I LD E Y
Sbjct: 516 SRLEYRLTSTTPNFPFAINNSTGWIVVAAELDRESVDFY 554
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 77/161 (47%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLL---DNNTD---------AASYFNLD----PATEHQGP 75
+++QV ATD+DSG G V Y D + D + LD P Q
Sbjct: 811 SVVQVSATDRDSGLNGRVFYTFQGGEDGDGDFIIESTSGIVRTLRRLDRENVPVYNLQAF 870
Query: 76 IQDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G + VNI VT D+ND P F+ + V E GL VG V ATD DEG
Sbjct: 871 AVDKGVPALKTPVNIHVTILDVNDNPPVFEKDELDIMVEENSPIGLVVGHVSATDPDEGS 930
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ + LDYE + Y+
Sbjct: 931 NAQIMYQIVEGNIPEVFQLDIFSGELTSLIDLDYETRNEYV 971
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 31/179 (17%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEY---RLLDNNTDAASYFNLDPATEHQGPI 76
G + R + G + +KA D D G+ G +EY L D+ ++ S F +DPA +
Sbjct: 167 GCLWRRTSQPGRPSLVLKAVDADEGEAGRLEYFIEALFDSRSN--SLFAVDPANGAVSTV 224
Query: 77 Q-----------------DEGGLSSTA--TVNIRVTDINDKNPEFQSLPYEFSVPEGQD- 116
+ D G TA T+ I V+D ND NP F+ Y+ ++ E +
Sbjct: 225 EVLDRETKDTHVFRVTAVDHGAPRRTAMATLTITVSDTNDHNPVFEQQDYKENIRENLEI 284
Query: 117 GLAVGRVHATDADEGQNAVVYYSV-----PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
G V V ATD D N + Y + D+ F +D+ +G IRT +D E+ + Y+
Sbjct: 285 GYEVLTVRATDGDAPVNGNILYRIINGNGSNDV-FEIDSRSGVIRTRGLVDREQVEAYM 342
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY 137
+G L TA V + VTD N P FQS Y ++ E + G V + ATD D G+NA +
Sbjct: 667 DGTLFDTAKVFVNVTDANTHRPVFQSSHYTVNINEDRPMGTTVVLISATDEDTGENARIT 726
Query: 138 YSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
Y + + IP F +D ++G + T LDYE Q Y
Sbjct: 727 YFMDDSIPQFDIDPDSGAVTTQMELDYEDQVSY 759
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 28/174 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSST 85
+G T++ + ATD+D+G+ + Y +D D+ F++DP A Q + E +S T
Sbjct: 705 MGTTVVLISATDEDTGENARITY-FMD---DSIPQFDIDPDSGAVTTQMELDYEDQVSYT 760
Query: 86 ATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDA 128
+ R V D+ND P F Y SV E +V +V ATD
Sbjct: 761 LAITARDNGIPQKSDTTYLEILVNDVNDNGPRFLRDHYVGSVMEDVPVFTSVVQVSATDR 820
Query: 129 DEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
D G N V+Y+ D F++++ +G +RT + LD E +Y + F + K
Sbjct: 821 DSGLNGRVFYTFQGGEDGDGDFIIESTSGIVRTLRRLDRENVPVYNLQAFAVDK 874
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 35/170 (20%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNT-----------DAASYFNLD 67
LG +++ ++A D DSG +EYRL ++N+T ++ ++N
Sbjct: 498 LGYSIIHIQAVDADSGDNSRLEYRLTSTTPNFPFAINNSTGWIVVAAELDRESVDFYNFG 557
Query: 68 PATEHQG-PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHA 125
QG P+ +SS+A++++ V D+ND NPEF Y + E G +V V A
Sbjct: 558 VEARDQGYPV-----MSSSASISMTVLDVNDNNPEFTQKAYYMRLNEDAAVGTSVLTVSA 612
Query: 126 TDADEGQNAVVYYSVPED-----IPFVVDANTGDIRTNKALDYEKQQLYL 170
D D N+VV Y + + G I LDY+ ++ Y+
Sbjct: 613 VDQD--INSVVTYQISSGNTRNRFSITSQSGGGLITLALPLDYKLERQYV 660
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 28/168 (16%)
Query: 22 MARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPAT 70
M + +G+ + V ATD D G + Y++++ N + S +LD T
Sbjct: 907 MVEENSPIGLVVGHVSATDPDEGSNAQIMYQIVEGNIPEVFQLDIFSGELTSLIDLDYET 966
Query: 71 EHQGPI---QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGL 118
++ I L S ATV+I++ D ND P ++ F S P G
Sbjct: 967 RNEYVIVVQATSAPLVSRATVHIKLVDKNDNVPVLKNFQIIFNNYVTNKYSSFPSG---- 1022
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
+GR+ A D D + V ++ V ++ +TG+I+ ++ALD +
Sbjct: 1023 VIGRIPAHDPDVSDQLHYSFEVGNELNLVLLNQSTGEIQLSQALDNNR 1070
>gi|348525438|ref|XP_003450229.1| PREDICTED: protocadherin-16-like [Oreochromis niloticus]
Length = 3282
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 76/167 (45%), Gaps = 23/167 (13%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-NTDAASYFNLDPAT------ 70
FY + G +++V A D DSG FGL+ Y L N+ S F + T
Sbjct: 583 FYNVSIEENTGPGTCILEVTAADADSGSFGLITYSLGSGINSAVPSQFTIGKETGQICTT 642
Query: 71 ----EHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDG 117
QGP D GGLSS A V + + DIND P F L Y S+ + G
Sbjct: 643 AALDRDQGPASFDFTVTAVDGGGLSSVAYVRVDLVDINDNRPAFYPLSYAVSLSTQSAPG 702
Query: 118 LAVGRVHATDADEGQNA-VVYYSVPEDIP--FVVDANTGDIRTNKAL 161
+V RV A D D G+N + Y +VP F ++ +TG I ++++
Sbjct: 703 TSVVRVTAYDPDSGKNGRITYKTVPGGASPYFTLNKDTGVISLSRSV 749
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 76/162 (46%), Gaps = 26/162 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------EHQGP-- 75
G ++QV A DKD G G + Y +L + + S+F++D T ++ P
Sbjct: 488 GSFVLQVTARDKDQGPNGDISYSILQDGSAYYSWFSIDSITGIITTLSQLDYEKNPSPSI 547
Query: 76 --IQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
+ +GG LSSTA VNI + DIND P F+ Y S+ E G + V A DAD
Sbjct: 548 TVVATDGGKPSLSSTAVVNIFLQDINDNEPVFERNFYNVSIEENTGPGTCILEVTAADAD 607
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEK 165
G ++ YS+ I F + TG I T ALD ++
Sbjct: 608 SGSFGLITYSLGSGINSAVPSQFTIGKETGQICTTAALDRDQ 649
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 75/159 (47%), Gaps = 24/159 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGP------- 75
L ++ATD+D+G G + Y++ D + F LD P + P
Sbjct: 1763 LFTLRATDQDAGDNGRINYKITAG--DPSGDFRLDGQSGVLSTSRPLDREKRPGYSLTVI 1820
Query: 76 IQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
QD+G LSSTATV + V DIND +P+FQS Y + E G V V A D D G
Sbjct: 1821 AQDQGHPPLSSTATVEVIVLDINDHSPQFQSSSYTAEILEDVPIGSLVLEVKAIDLDHGP 1880
Query: 133 NAVVYY--SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
N+ V Y S F++D NTG I T LD E+ Y
Sbjct: 1881 NSQVLYFLSHGSQSMFMIDQNTGRIITASPLDRERTASY 1919
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 81/174 (46%), Gaps = 24/174 (13%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-----------NNTDA----ASYFN 65
A R+ + + A D D G FG + Y +LD N+T S F+
Sbjct: 2698 ASIRENQPQNALVTMLHAIDHDRGVFGQLRYYMLDSFKEGKEGFFINHTSGEIRTRSSFD 2757
Query: 66 LDPATEHQ--GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGR 122
+ Q D G S+T TV + VT ++ +P F S + F VPEG + G +G+
Sbjct: 2758 FEKLNSFQFMAMAVDAGNYSATVTVKVYVTGEDEYDPVFTSSEFLFEVPEGAKKGQVIGK 2817
Query: 123 VHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRT-----NKALDYEKQQLYL 170
V A D D G + VV YS+P+ P F V+ +TG+I ++ + K++L L
Sbjct: 2818 VQARDEDGGVDGVVLYSLPDHSPYFEVNKSTGEISLKLDSYSRHMSRSKRELRL 2871
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQ---- 73
+G ++ V A D D G+ G V YR+ NT A F+L+P+T E Q
Sbjct: 1553 VGFVVLYVMARDADQGENGRVTYRIQSGNT--AGTFSLNPSTGSLSIFKPLDREEQDIFN 1610
Query: 74 -GPIQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
I ++ G+ SS + + V D+ND+ P F+ YE + E Q G +V V A D
Sbjct: 1611 LTVIAEDHGIPQHSSIQLLCVHVIDVNDEVPWFEQSQYEVEISENQPPGTSVLTVSAADL 1670
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D+G N V Y F ++ +G I K+LD E Q+ Y
Sbjct: 1671 DQGSNGQVTYDGISQEGFSINPVSGVIMITKSLDRELQEYY 1711
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 73/165 (44%), Gaps = 33/165 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------------ 77
G +++ V A D D G G V Y + F+++P + G I
Sbjct: 1659 GTSVLTVSAADLDQGSNGQVTYDGISQEG-----FSINPVS---GVIMITKSLDRELQEY 1710
Query: 78 -------DEGGLS---STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATD 127
+GGL + ATV I+VTD+ND P F L Y VPE + L + + ATD
Sbjct: 1711 YTVTVSAKDGGLPPNYAKATVRIKVTDVNDNPPVFGRLYYSIEVPENLEALPLFTLRATD 1770
Query: 128 ADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
D G N + Y + P F +D +G + T++ LD EK+ Y
Sbjct: 1771 QDAGDNGRINYKITAGDPSGDFRLDGQSGVLSTSRPLDREKRPGY 1815
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 82/183 (44%), Gaps = 28/183 (15%)
Query: 11 EMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---------NNTDAA 61
+T + +F R+ G V ATD+DSG G YR L + + +
Sbjct: 1109 RLTQERVFMAV--RENLPPGTGFGHVLATDRDSGPNGRPAYRFLHPDRHFQINTHTGEIS 1166
Query: 62 SYFNLDPATEHQGPIQ-----DEGG---LSSTATVNIRVTDINDKNPEF----QSLPYEF 109
+ LD E Q Q +GG S+T T I V D ND +P F
Sbjct: 1167 TRMTLD--REQQSSYQLVVVAQDGGSPPRSATGTAFITVLDENDNDPVFIHSQSGKNIII 1224
Query: 110 SVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQ 166
V EGQ G+ +G + A D DEG+N ++YS+ P F ++ NTG++R++ L + ++
Sbjct: 1225 QVTEGQPSGVVLGTLQAKDPDEGENGTIFYSLSGPRAERFSLNTNTGELRSSSPLSHSER 1284
Query: 167 QLY 169
Y
Sbjct: 1285 AEY 1287
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE--- 142
T++I V DIND P F Y + E Q G + +V ATD DEG N +V Y +
Sbjct: 240 TLDITVQDINDNAPVFNQSRYHAIISENLQPGSNILQVFATDVDEGDNGMVLYEINRRQS 299
Query: 143 --DIPFVVDANTGDIRTNKALDYEKQQLY 169
D FV+D+ TG I NK LD+E ++++
Sbjct: 300 DPDRYFVIDSRTGIITLNKPLDFEMRRVH 328
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 77/176 (43%), Gaps = 32/176 (18%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI 76
L Y + G ++++V A D DSGK G + Y+ + A+ YF L+ T G I
Sbjct: 689 LSYAVSLSTQSAPGTSVVRVTAYDPDSGKNGRITYKTVPGG--ASPYFTLNKDT---GVI 743
Query: 77 --------------------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
QD GGL + A VNI V P F+ Y F+V E
Sbjct: 744 SLSRSVYGKANSVIPMVISAQDGGGLVALVNARVNISVVAGLVAPPVFEKTQYYFTVSED 803
Query: 115 -QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQ 166
G VG V A+ + G + + Y++ P F VD +TG +RT+ LD+E Q
Sbjct: 804 VLRGTVVGIVQAS-SKTGTSRDISYTISSGDPAGYFTVDPDTGALRTSLPLDHEAQ 858
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 74/183 (40%), Gaps = 33/183 (18%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKD---SGKFGLVEYRL------------------ 53
D+L Y ++ + +QV+A +++ SG FG + Y L
Sbjct: 1002 DTLTYRVELKEGTPISTRFLQVRALNRETPTSGLFGPLAYHLRPDGDAAGFGIAADSGWL 1061
Query: 54 -----LDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYE 108
LD + +T H G ++ G +ATV I VTD ND +P
Sbjct: 1062 FVKSALDREVKDMYLLTVLASTGH-GQLKKTG----SATVRISVTDENDNSPRLTQERVF 1116
Query: 109 FSVPEG-QDGLAVGRVHATDADEGQNAV-VYYSVPEDIPFVVDANTGDIRTNKALDYEKQ 166
+V E G G V ATD D G N Y + D F ++ +TG+I T LD E+Q
Sbjct: 1117 MAVRENLPPGTGFGHVLATDRDSGPNGRPAYRFLHPDRHFQINTHTGEISTRMTLDREQQ 1176
Query: 167 QLY 169
Y
Sbjct: 1177 SSY 1179
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 25/170 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGP 75
Y + + G ++ + ATD DS V Y + ++ D + F++D T Q P
Sbjct: 2593 YSVILSEGTAAGTEILHLSATDPDSAPNSEVRYSI--SSGDETNLFHVDQWTGALRLQRP 2650
Query: 76 IQDEGGLS--------------STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-V 120
+ E LS + A V+I V DIND P F S+ E Q A V
Sbjct: 2651 LNSETQLSHLIVVQATDGQGHFALAPVSIEVKDINDNRPFFPLNLVTASIRENQPQNALV 2710
Query: 121 GRVHATDADEGQNAVVYYSVPEDIP-----FVVDANTGDIRTNKALDYEK 165
+HA D D G + Y + + F ++ +G+IRT + D+EK
Sbjct: 2711 TMLHAIDHDRGVFGQLRYYMLDSFKEGKEGFFINHTSGEIRTRSSFDFEK 2760
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 24/121 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G ++ V ATD+DSG G + YR++ + F +DP + + P
Sbjct: 2382 GSAVITVTATDRDSGDNGKITYRVM---SSTKGVFYIDPVNGTLFTKQKTEFDFENPSIL 2438
Query: 76 ----IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDA 128
+D+G LS+ ATV+++V+DIND P F Y +V E G G V + A D
Sbjct: 2439 VVIEARDQGTPSLSAIATVHVQVSDINDNAPIFHQSEYRATVSEDGLPGSTVLILEAVDG 2498
Query: 129 D 129
D
Sbjct: 2499 D 2499
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
L + ++ I+V DIND P F Y +PE G V +V A D D+G N + YS+
Sbjct: 452 LRAESSFTIQVIDINDNPPLFDQPVYRQVIPEVVFPGSFVLQVTARDKDQGPNGDISYSI 511
Query: 141 PEDIP-----FVVDANTGDIRTNKALDYEK 165
+D F +D+ TG I T LDYEK
Sbjct: 512 LQDGSAYYSWFSIDSITGIITTLSQLDYEK 541
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVP 141
SS+ + I VTD ND P F Y + EG G + + ATD D N+ V YS+
Sbjct: 2569 SSSVPIIISVTDANDNPPVFSRTEYSVILSEGTAAGTEILHLSATDPDSAPNSEVRYSIS 2628
Query: 142 ---EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
E F VD TG +R + L+ E Q +L
Sbjct: 2629 SGDETNLFHVDQWTGALRLQRPLNSETQLSHL 2660
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 77/184 (41%), Gaps = 28/184 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------- 71
Y A+ + + G ++QV ATD D G G+V Y + +D YF +D T
Sbjct: 260 YHAIISENLQPGSNILQVFATDVDEGDNGMVLYEINRRQSDPDRYFVIDSRTGIITLNKP 319
Query: 72 --------HQGPIQDEGGLS----STATVNIRVTDINDKNPE----FQSLPYEFSVPEG- 114
H+ +Q + + + A V I V D ND P F S + EG
Sbjct: 320 LDFEMRRVHELVVQAQDNATHPEVTNAFVTIHVRDYNDNQPTMTIIFLSEDGSPRISEGA 379
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSVP-EDIPFVV---DANTGDIRTNKALDYEKQQLYL 170
Q G V R+ TD D G+ A V S+ D F + D+ I ++ LD E++ Y
Sbjct: 380 QPGQYVARISVTDPDYGEYANVNVSLEGGDGKFALTTKDSIIYLICVDQILDREERDTYE 439
Query: 171 ERVF 174
RV
Sbjct: 440 LRVM 443
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 71/166 (42%), Gaps = 31/166 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNT------------DAASYFNLDP 68
GV L ++A D D G+ G + Y L L+ NT + A Y +
Sbjct: 1233 GVVLGTLQAKDPDEGENGTIFYSLSGPRAERFSLNTNTGELRSSSPLSHSERAEYTLMVT 1292
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF-SVPEGQDGLAVGRVHATD 127
AT+ P + S++ ++ I+V N + SL F SV E + G +G V D
Sbjct: 1293 ATDRGLPPR-----STSCSLTIQVISNNRPATKKNSLSITFNSVEEAKPGSVIGSVCLHD 1347
Query: 128 ADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ V Y+V D FVVD TGD+ + LDYE+ Y
Sbjct: 1348 RGTLEDDKVTYTVVGGTDRDGTFVVDRLTGDVYLARPLDYERDSRY 1393
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
SS VN+ + D+ND P FQ Y + E Q + +V A D D+GQN V YS+
Sbjct: 2142 SSYMAVNLILQDVNDNLPRFQLQNYVAYIREAQGYDFPIIQVAADDRDQGQNGQVTYSIR 2201
Query: 142 EDIP---FVVDANTGDIRTNKALDYE 164
F +D TG + T +D E
Sbjct: 2202 SSSMSGLFKIDPLTGSVTTAAIMDRE 2227
Score = 38.9 bits (89), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD-EGQNAVVYYSV 140
S+ ++I + D ND P+F P + E D G +V ATD D G N+ + YS+
Sbjct: 1409 STLVHLDIDIEDSNDHTPQFPEDPITIVISESMDPGSSVYTFQATDKDGSGTNSKLVYSI 1468
Query: 141 PEDIP-----FVVDANTGDIRTNKALDYE 164
+ P +D +TG + + LDYE
Sbjct: 1469 LQQWPNTPGLLTLDPSTGVLSLGQKLDYE 1497
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 27/173 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNN-----------------TDAASYFNLDPAT 70
E+G + +V+A D+DSG G + + L +N + SY N P
Sbjct: 909 EMGTVVYRVQAEDRDSGVNGQLTFDLSSSNGLQRIFSVERSSGEIRLVGSLSYENT-PRY 967
Query: 71 EHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG----QDGLAVGRVH 124
+ Q +D G LS+T T+ + V ND+ P F +L Y + EG L V ++
Sbjct: 968 DLQVITKDSGVPQLSATFTLVVHVQAENDQGPVFDTLTYRVELKEGTPISTRFLQVRALN 1027
Query: 125 ATDADEGQNAVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
G + Y + D F + A++G + ALD E + +YL V
Sbjct: 1028 RETPTSGLFGPLAYHLRPDGDAAGFGIAADSGWLFVKSALDREVKDMYLLTVL 1080
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE 142
S A + + V D+ND +P F Y+ +V E G AV V ATD D G N + Y V
Sbjct: 2348 SEANLTVLVDDVNDNSPTFTQDLYQVAVSEHLPAGSAVITVTATDRDSGDNGKITYRVMS 2407
Query: 143 DIP--FVVDANTGDIRTNKALDYE 164
F +D G + T + +++
Sbjct: 2408 STKGVFYIDPVNGTLFTKQKTEFD 2431
>gi|116110556|gb|ABJ74657.1| stan [Drosophila miranda]
Length = 549
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 65/132 (49%), Gaps = 21/132 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP----------------ATEH 72
+G +++QV A D D G G ++Y L D + + S+ +DP A H
Sbjct: 208 VGTSVIQVSACDPDIGLNGRIKYLLSDRDVEDGSFL-IDPTSGTVRTNKGLDRESVAVYH 266
Query: 73 QGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
I + G LSS+ V IR+ D+ND P F S VPE G VG +HA D
Sbjct: 267 LTAIAVDKGSPPLSSSVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDP 326
Query: 129 DEGQNAVVYYSV 140
DEG NAVV+YS+
Sbjct: 327 DEGVNAVVHYSI 338
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPATEH--- 72
Y A + +G T++ V ATD D G + Y L + N + F+++P T
Sbjct: 88 YSASVFEDAPVGTTVLVVSATDSDVGINAQITYSLNEESINGLGSPDPFSINPQTGAIVT 147
Query: 73 QGPIQDE-------------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
P+ E GG LS T V I VTD+ND P F++ Y+ S+ E
Sbjct: 148 NAPLDRETTSGYLLTVTSKDGGSPSLSDTTDVEISVTDVNDNAPVFKNPLYQSSILEDAL 207
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G +V +V A D D G N + Y + ED F++D +G +RTNK LD E +Y
Sbjct: 208 VGTSVIQVSACDPDIGLNGRIKYLLSDRDVEDGSFLIDPTSGTVRTNKGLDRESVAVY 265
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG S TATV+I +TD N+ P F++ PY SV E G V V ATD+D G NA +
Sbjct: 59 DSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGINAQI 118
Query: 137 YYSVPEDI--------PFVVDANTGDIRTNKALDYEKQQLYLERV 173
YS+ E+ PF ++ TG I TN LD E YL V
Sbjct: 119 TYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTV 163
>gi|426247588|ref|XP_004017563.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23 [Ovis aries]
Length = 3324
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 78/157 (49%), Gaps = 31/157 (19%)
Query: 35 QVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQGPI--Q 77
++ A D+DSGK G + Y LL + +F ++P T HQ +
Sbjct: 1164 KITAIDRDSGKNGQLSYFLLSD----GKFFKMNPNTGELISWVALDHEQRAHHQVAVLVS 1219
Query: 78 DEGG--LSSTATVNIRVTDINDKNPEF-QSLPYE---FSVPEGQD-GLAVGRVHATDADE 130
D G S+T V++ VTDIND P F Q L + V EGQ + V V A D DE
Sbjct: 1220 DHGSPPRSATTLVHVSVTDINDNRPYFPQCLAGKELYVKVLEGQPVNMLVTTVFAKDLDE 1279
Query: 131 GQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYE 164
G NA V YS+ + PF +DAN+G+IRT + L ++
Sbjct: 1280 GSNAEVIYSISSEGSSDPFKIDANSGEIRTTRVLSHD 1316
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 88/184 (47%), Gaps = 31/184 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQG 74
F A R+ +G + + A D D+G+ G V + +L N + A F LD ++
Sbjct: 1575 FPIARVREDAAVGSLVHHITAQDPDAGRNGRVTFSILSGNENMA--FMLDESSGFLTTAS 1632
Query: 75 PIQDE-------------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
P+ E GG LSS+ T+ I V D+ND+ P F+ YE SV E Q+ G
Sbjct: 1633 PLDYEIKSQHILTLLALDGGTPTLSSSQTLTITVLDVNDEAPVFKQHLYEASVKENQNPG 1692
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLE 171
V RV A D D G N+ + + + +P F ++ +TG++ T LD E Q++
Sbjct: 1693 EFVTRVEAMDRDSGINSKLQFEI---MPGASFRLFQINPDTGEVVTATTLDREVQEVLTL 1749
Query: 172 RVFL 175
RV +
Sbjct: 1750 RVLV 1753
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 76/172 (44%), Gaps = 30/172 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD--NNTDAASYFNLDPATEHQGPI 76
Y A + +G +QVKA+D D+G +G VEY L + +A F +DP H G I
Sbjct: 655 YNATLPEHAPVGHCFLQVKASDADAGLYGFVEYFLYAGFQSYEAPQAFQIDP---HDGRI 711
Query: 77 ---------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EG 114
+D GGLS+ A V + + D+ND P F L Y S+ +
Sbjct: 712 CVSQDTDRERDPATYDLLVKAKDGGGLSAQAFVRVELEDVNDNEPVFNPLTYVTSLSGQA 771
Query: 115 QDGLAVGRVHATDADEGQNAVVYYS-VPEDIP--FVVDANTGDIRTNKALDY 163
Q G V V ATD D G V Y V D+ F +D+ TG I L +
Sbjct: 772 QLGTEVINVLATDRDSGMYGTVTYELVLGDLSSFFTIDSTTGIIYLASTLSH 823
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 70/158 (44%), Gaps = 30/158 (18%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL--------------- 82
A+D D+G G V Y ++ NTD YF ++ E G + L
Sbjct: 1804 ASDMDAGSNGAVTYHIISGNTD--EYFAIN---EMSGELSTTRALDREEVSNFTLVILCS 1858
Query: 83 -------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNA 134
SSTA + +RV D+ND +P F YE SV E G V + + D DEG N
Sbjct: 1859 DLGSPPQSSTAQLQVRVLDVNDHSPSFPRQQYEASVREDAPVGTTVLVLSSVDEDEGLNG 1918
Query: 135 VVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYL 170
YS+ + F +D G +RT++ LD E + ++
Sbjct: 1919 QTKYSLVHEASGVFTIDPAAGALRTSRTLDREARSEHV 1956
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 73/161 (45%), Gaps = 29/161 (18%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------------ATEHQGPIQ 77
++QV ATD+DSG GLVEY +L N + F +DP + + +Q
Sbjct: 2213 IVQVFATDQDSGSNGLVEYSILSGN--QGNVFQMDPLSGVLTANVILDYEYTSAYSLIVQ 2270
Query: 78 --DEG--GLSSTATVNIRVTDINDKNPEFQSLPYE-FSVPEGQ-DGLAVGRVHATDADEG 131
D+G LS T + I+V DIND P F LP E + E G V R+ D D
Sbjct: 2271 ATDKGIPRLSDTTVIKIQVIDINDNAPTF--LPSEAVEIAENSLPGTIVTRISVYDVDSN 2328
Query: 132 QNAVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLY 169
A + V E F +D NTG + + LD+E+ Y
Sbjct: 2329 P-AFTFSFVKESNSGTKFAIDRNTGVVVLVETLDFEEASKY 2368
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 75/175 (42%), Gaps = 30/175 (17%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI 76
L Y + +LG ++ V ATD+DSG +G V Y L+ D +S+F +D T G I
Sbjct: 761 LTYVTSLSGQAQLGTEVINVLATDRDSGMYGTVTYELVLG--DLSSFFTIDSTT---GII 815
Query: 77 --------------------QDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
+D GGL+S A V I + + EF+ Y FSV E
Sbjct: 816 YLASTLSHLESTTLLLMVCARDGGGLTSVTNAEVTIHILQMTLAPAEFERPKYTFSVYED 875
Query: 115 -QDGLAVGRVHATDADEGQNAVVYY--SVPEDIPFVVDANTGDIRTNKALDYEKQ 166
+ VG V A ++ V Y S D F + G IRT K LD+E Q
Sbjct: 876 IPEDSPVGTVKAKESLNSSEPVFYRISSGNLDGTFSIHPWLGTIRTQKPLDHEAQ 930
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 25/175 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA--------- 69
Y A R+ +G T++ + + D+D G G +Y L+ +A+ F +DPA
Sbjct: 1890 YEASVREDAPVGTTVLVLSSVDEDEGLNGQTKYSLVH---EASGVFTIDPAAGALRTSRT 1946
Query: 70 ------TEH--QGPIQD---EGGLSSTATVNIRVTDINDKNPEFQSLPYE-FSVPEGQDG 117
+EH + +D G S+T + + VTD+ND P ++ P + F +
Sbjct: 1947 LDREARSEHVLKAVARDCGVHGSRSATVVIKVHVTDVNDNRPVWEQNPLDIFLSSQSPTN 2006
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEKQQLYLE 171
+ A+D D G N V +S E + ++ TG I+ + E ++L+
Sbjct: 2007 QTAAILRASDPDSGPNGTVTFSFAEPQSMLSINEYTGAIQIQQIPSSEYFPIWLQ 2061
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 35/167 (20%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLL-----------DNNTDAASYFNLDPATEHQGPIQ--- 77
T+ V A D D+G +G + Y ++ D+N F +DP T Q
Sbjct: 2739 TICSVNALDFDAGPYGDMTYSIVSPCPLPQEMPHDHN-----LFLIDPLTGDISAQQVLD 2793
Query: 78 --------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR 122
D+GG +++ V + V I++ P F Y F++PE +GR
Sbjct: 2794 YENDNKYCLIVQAKDKGGSTASLMVWVDVEGIDEFEPIFSQDQYFFNLPEKSHVRHLIGR 2853
Query: 123 VHATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEKQQL 168
V A+DAD G + V+ YS+ PF V+ G+I ++AL K Q+
Sbjct: 2854 VEASDADAGVDGVILYSLETPSPFFSVNKTNGNIYLSRALPPVKSQV 2900
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 21/172 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA---------------S 62
Y + + E G +++ +KA DS + ++Y + N D
Sbjct: 2095 LYKGIVPENCEAGTSIVTIKAFAPDSIRDN-IKYSVFSGNEDGVFSLCSKSGEVTVKEPK 2153
Query: 63 YFNLDPATEHQGPIQDEG-GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAV 120
+ + + E Q + E G + + V + V D+ND P F+ Y+ SV EGQ +
Sbjct: 2154 FLDFEVRKEVQLIVLAESRGHRAYSKVAVFVQDLNDHPPHFEQSVYQVSVSEGQFYNHHI 2213
Query: 121 GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ATD D G N +V YS+ + F +D +G + N LDYE Y
Sbjct: 2214 VQVFATDQDSGSNGLVEYSILSGNQGNVFQMDPLSGVLTANVILDYEYTSAY 2265
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 78/184 (42%), Gaps = 32/184 (17%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
SL Y A ++ G ++ V A+D+D G V Y L N +F L+ T
Sbjct: 2619 SLEYYAHIKESTPPGSPIIVVSASDRDVGSHAEVSYYLTSGN--EKQHFCLEEKTGVLSL 2676
Query: 71 ----EHQGPIQ---------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG 117
+++ I+ +E S A V + V D ND P+F +VPE
Sbjct: 2677 IKPLDYEETIKFILTVQASDEERKHFSFAIVFVNVLDDNDHAPQFMFPNLNCAVPENLPV 2736
Query: 118 LA-VGRVHATDADEGQNAVVYYSV------PEDIP-----FVVDANTGDIRTNKALDYEK 165
+ + V+A D D G + YS+ P+++P F++D TGDI + LDYE
Sbjct: 2737 FSTICSVNALDFDAGPYGDMTYSIVSPCPLPQEMPHDHNLFLIDPLTGDISAQQVLDYEN 2796
Query: 166 QQLY 169
Y
Sbjct: 2797 DNKY 2800
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYY-- 138
LSS+ATV+I V D++D P F SL Y + E G + V A+D D G +A V Y
Sbjct: 2597 LSSSATVSIEVLDVDDNPPAFSSLEYYAHIKESTPPGSPIIVVSASDRDVGSHAEVSYYL 2656
Query: 139 -SVPEDIPFVVDANTGDIRTNKALDYEK 165
S E F ++ TG + K LDYE+
Sbjct: 2657 TSGNEKQHFCLEEKTGVLSLIKPLDYEE 2684
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 45/98 (45%), Gaps = 16/98 (16%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV-PEDIP 145
V +RV D ND P F+ Y +V E + G V RV ATD D G N V YSV P
Sbjct: 312 VEVRVLDENDNPPVFEEREYRAAVREDARPGTEVCRVRATDRDLGPNGHVRYSVRSRQAP 371
Query: 146 --------------FVVDANTGDIRTNKALDYEKQQLY 169
FVV+ +G +R ++ LD E Q +
Sbjct: 372 GAGGSGGTLGDAAYFVVEELSGVVRVHRPLDREAQAWH 409
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 89 NIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---PEDIP 145
+ + D+ND +P F S P + G V + A D D G+N V +S+ E++
Sbjct: 1559 KVVILDVNDHSPTFTSFPIARVREDAAVGSLVHHITAQDPDAGRNGRVTFSILSGNENMA 1618
Query: 146 FVVDANTGDIRTNKALDYEKQQLYL 170
F++D ++G + T LDYE + ++
Sbjct: 1619 FMLDESSGFLTTASPLDYEIKSQHI 1643
Score = 42.7 bits (99), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 71/171 (41%), Gaps = 26/171 (15%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSG-----KFGLV---EYRLLDNNTDAASYFNLDPA 69
Y A ++ G + +V+A D+DSG +F ++ +RL N D A
Sbjct: 1680 LYEASVKENQNPGEFVTRVEAMDRDSGINSKLQFEIMPGASFRLFQINPDTGEVVT---A 1736
Query: 70 TEHQGPIQD---------EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG 117
T +Q+ +GG LS T + V D ND PE V E Q+
Sbjct: 1737 TTLDREVQEVLTLRVLVRDGGAPALSGTTVILCTVGDENDHAPEIAVPRDNIEVLENQEP 1796
Query: 118 LAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEK 165
V A+D D G N V Y + D F ++ +G++ T +ALD E+
Sbjct: 1797 GLVYTFLASDMDAGSNGAVTYHIISGNTDEYFAINEMSGELSTTRALDREE 1847
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY 137
E LS+T V+I V D+ND P F Y ++PE G +V A+DAD G V
Sbjct: 627 EPPLSATCLVSITVEDVNDNEPVFLKQVYNATLPEHAPVGHCFLQVKASDADAGLYGFVE 686
Query: 138 Y-------SVPEDIPFVVDANTGDIRTNKALDYEK 165
Y S F +D + G I ++ D E+
Sbjct: 687 YFLYAGFQSYEAPQAFQIDPHDGRICVSQDTDRER 721
Score = 36.2 bits (82), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQS-----LPYEFSVPEGQDGLAVGRVHATDADEG 131
+D+ + + +V + V D ND +P F E +P+G +G++ A D D G
Sbjct: 1118 EDKLSQNVSTSVIVHVLDENDNSPTFLHDVLFLKVQESPMPQG----VIGKITAIDRDSG 1173
Query: 132 QNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEKQ 166
+N + Y + D F ++ NTG++ + ALD+E++
Sbjct: 1174 KNGQLSYFLLSDGKFFKMNPNTGELISWVALDHEQR 1209
>gi|6688786|emb|CAB65271.1| mouse fat 1 cadherin [Mus musculus]
Length = 4587
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 74/160 (46%), Gaps = 23/160 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG---- 74
G +MQV ATD D + Y L + A F L+P T E Q
Sbjct: 3041 GKLVMQVSATDADIRSNAEITYTLFGS---GAEKFKLNPDTGELRTLALLDREEQAVYNL 3097
Query: 75 --PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D GG S A + + + D+ND PEF + PY +V E + G + RV ATDAD G
Sbjct: 3098 LVKATDGGGRSCQAAIVLTLEDVNDNAPEFTAEPYTITVFENTEPGTPLTRVQATDADTG 3157
Query: 132 QNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
N + YS+ E D F ++ +G I+ K LD E Q +Y
Sbjct: 3158 LNRKISYSLVESADGQFSINERSGIIQLEKHLDRELQAVY 3197
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 79/155 (50%), Gaps = 22/155 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI-- 76
L ++QVKA+D+DSG + V Y ++++ Y N LD T + I
Sbjct: 2509 LHTLVVQVKASDRDSGIYSHVTYHIVNDFAKDRFYVNDRGQIFTLEKLDRETPAEKVISI 2568
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEG 131
+D GG + TVN+ +TD ND P+F+S YE ++ G +V +V A+DADEG
Sbjct: 2569 RLMAKDAGGKVAFCTVNVILTDDNDNAPQFRSTKYEVNIGSSAAKGTSVVKVFASDADEG 2628
Query: 132 QNAVVYYSVPEDIPFV-----VDANTGDIRTNKAL 161
NA V Y++ D V ++ TG I T ++L
Sbjct: 2629 SNADVTYAIEADSESVKENLEINKLTGLITTKESL 2663
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP- 141
++A V ++V N PEF Y+ S+ E G AV RV A D DEG+N V YS+
Sbjct: 446 ASARVVVKVLGTNSNPPEFTQTSYKASIDENAPIGAAVTRVSAMDPDEGENGYVTYSIAN 505
Query: 142 -EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSY 183
+PFV+D TG + T++ LDYE + RV+ + A+ +
Sbjct: 506 LNHVPFVIDHFTGTVSTSENLDYE----LMPRVYTLRIRASDW 544
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 87/178 (48%), Gaps = 33/178 (18%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
++ ++ DK E+ ++QV+ATDKD G G V Y +L TD F++D T
Sbjct: 828 YFVEVSEDK-EVNSEIIQVEATDKDLGPSGHVTYAIL---TDTEK-FSIDSMTGVVKIIQ 882
Query: 71 --------------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
E + +E L ST + + + D+ND P F +P +SV +D
Sbjct: 883 PLDREVQPVHYLKIEARDQATEEPRLFSTVLLKVSLDDVNDNPPRF--IPPNYSVKVRED 940
Query: 117 ---GLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
G + + A D D GQ++ V YS+ + + F VD +G +R + LD+EK+QLY
Sbjct: 941 LPEGTIIMWLEAYDPDVGQSSQVRYSLLDHGEGHFDVDKLSGAVRIVQQLDFEKKQLY 998
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 76/167 (45%), Gaps = 21/167 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--------TDAASYF---NLD 67
YGA + +G ++QV A +D + Y ++ N + + F +LD
Sbjct: 3237 YGASVSEDIVIGTEVLQVYAASRDIEANAEITYAIISGNEHGKFSIDSKTGAIFIIESLD 3296
Query: 68 PATEHQGPIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAV 120
+ H+ + E GG LS ATVNI VTDIND +P F Y V E V
Sbjct: 3297 YESSHEYYLTVEATDGGTPSLSDVATVNINVTDINDNSPVFSQDTYTTVVSEDAALEQPV 3356
Query: 121 GRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYE 164
+ A DAD N+ ++YS+ E PF +D G+++ K LD E
Sbjct: 3357 ITIMADDADGPSNSHIHYSIIEGNQGSPFTIDPVRGEVKVTKPLDRE 3403
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 77/169 (45%), Gaps = 33/169 (19%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ---------- 77
E G L +V+ATD D+G + Y L+++ A F+++ E G IQ
Sbjct: 3141 EPGTPLTRVQATDADTGLNRKISYSLVES---ADGQFSIN---ERSGIIQLEKHLDRELQ 3194
Query: 78 ----------DEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRV 123
D+G L++T TV + V DIND P F+ Y SV E G V +V
Sbjct: 3195 AVYTLTLKAVDQGLPRRLTATGTVVVSVLDINDNPPVFEYREYGASVSEDIVIGTEVLQV 3254
Query: 124 HATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+A D NA + Y++ E F +D+ TG I ++LDYE Y
Sbjct: 3255 YAASRDIEANAEITYAIISGNEHGKFSIDSKTGAIFIIESLDYESSHEY 3303
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVY 137
+G SS A V ++V D ND +P + Y ++PE G V +V ATDAD NA +
Sbjct: 3002 DGTFSSKARVEVKVLDANDNSPVCEKTSYSDTIPEDALPGKLVMQVSATDADIRSNAEIT 3061
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ F ++ +TG++RT LD E+Q +Y
Sbjct: 3062 YTLFGSGAEKFKLNPDTGELRTLALLDREEQAVY 3095
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 88 VNIRVTDINDKNPEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE---- 142
V+I+V D ND +P +S PYE F V G V ++ A+D D G N V YS+ +
Sbjct: 2797 VSIQVKDANDNSPVLESSPYEAFIVENLPGGSRVIQIRASDLDSGANGQVMYSLDQSQDA 2856
Query: 143 DI--PFVVDANTGDIRTNKALDYEKQQLYLERV 173
DI F ++ TG I T K LD+E++ Y +V
Sbjct: 2857 DIIESFAINMETGWITTLKELDHEERASYQIKV 2889
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 59/136 (43%), Gaps = 4/136 (2%)
Query: 37 KATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIN 96
KA + G F + R NT + D T ++ + A V ++V D N
Sbjct: 85 KAEEYVLGDFCFLRIRTKGGNTAILNREVRDHYTLIVKAVEKATDAEARAKVRVQVLDTN 144
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTG 153
D P F Y S+PE ++ RV ATDAD G N YYS + D+ F + +G
Sbjct: 145 DLRPLFSPTSYSVSLPENTAIRTSIARVSATDADIGTNGEFYYSFKDRTDV-FAIHPTSG 203
Query: 154 DIRTNKALDYEKQQLY 169
+ LD+ + QLY
Sbjct: 204 VVVLTGRLDFLETQLY 219
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 75/174 (43%), Gaps = 38/174 (21%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDA--------------------------ASY 63
G ++Q++A+D DSG G V Y L D + DA ASY
Sbjct: 2827 GSRVIQIRASDLDSGANGQVMYSL-DQSQDADIIESFAINMETGWITTLKELDHEERASY 2885
Query: 64 FNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
A++H +Q LSSTA V + VTD+ND P F + Y+ +V E G +
Sbjct: 2886 QIKVVASDHGEKVQ----LSSTAIVGVTVTDVNDSPPRFTAEIYKGTVSEDDPPGGVIAI 2941
Query: 123 VHATDAD--EGQNAVVYYSVPEDI--PFVVDANTGDIR--TNKALDYEKQQLYL 170
+ TDAD E V Y+ D F V+ D R K LD E++ YL
Sbjct: 2942 LSTTDADTEEINRQVSYFITGGDALGQFAVENVQSDWRVYVKKPLDREQKDSYL 2995
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 73/164 (44%), Gaps = 28/164 (17%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--FNLDPATE-------------HQGP 75
V ++Q+ A D+D K L+ L ++ D AS F LDPAT HQ
Sbjct: 1475 VEILQISAVDRDE-KNKLI--YTLQSSIDPASLKKFRLDPATGALYTAEKLDHEAIHQHV 1531
Query: 76 I------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+ QD + A + + V+D ND P F S Y+ V E G V +V A D
Sbjct: 1532 LTVMVRDQDVPVKRNFARIVVNVSDKNDHAPWFTSPSYDGRVYESAAVGSVVLQVTALDK 1591
Query: 129 DEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D+G+NA V YS+ F +D G I+T + LD Q Y
Sbjct: 1592 DKGRNAEVLYSIESGNIGNSFTIDPILGSIKTARELDRSHQVDY 1635
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 71/182 (39%), Gaps = 41/182 (22%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-- 76
Y A + +G + V A + S V Y + D N A FN++P H G I
Sbjct: 1674 YSAEISEAIRIGSFVGMVSAHSQSS-----VMYEIRDGNMGDA--FNINP---HSGSIIT 1723
Query: 77 ------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
+ GLS+ TV + V D ND P F Y + E
Sbjct: 1724 QRALDFETLPMYSLTVQGTNMAGLSTNTTVVVHVRDENDNPPVFTQAEYSGFISESASVN 1783
Query: 119 AVGR--------VHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQ 167
+V + ATDAD NA++ Y + E F +D TG IRT +LDYE+
Sbjct: 1784 SVVLTDRNVPLVIRATDADRESNALLVYQIVEPSVHNYFAIDPTTGAIRTVLSLDYEETH 1843
Query: 168 LY 169
+
Sbjct: 1844 AF 1845
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 35/179 (19%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-- 70
TS+ ++Y + + + V+++Q++A D DS + YR+ N +F++ P T
Sbjct: 1140 TSEPVYYPEIMENSPK-DVSVVQIEAFDPDSSSNDKLTYRITSGNPQG--FFSIHPKTGL 1196
Query: 71 --------------EH--QGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH + + D G S+ A V +++ D ND P+F Y+ +P
Sbjct: 1197 ITTTSRKLDREQQDEHILEVTVTDNGVPPRSTIARVIVKILDENDNRPQFLQKFYKIRLP 1256
Query: 113 EGQ--DG-------LAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNK 159
E + DG + RV A D DEG NA + YS+ E F ++ TG + + K
Sbjct: 1257 EREKADGDRSASKREPLYRVIAADKDEGPNAELSYSIEEGNEHGRFSIEPKTGVVSSKK 1315
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G + V+I V DIND P F Y ++ E G V +V ATD+D N + Y
Sbjct: 2264 GAHAEVFVDIIVEDINDNPPVFVQPSYSTTLSEASVIGTPVLQVRATDSDSEPNRGISYQ 2323
Query: 140 VPEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERVFL 175
+ + F +D+NTG I +ALDYE+ Q + R+F+
Sbjct: 2324 LIGNHSKSHDHFHIDSNTGLISLVRALDYEQSQQH--RIFV 2362
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI 76
G ++ +G ++ + ATD DSG G + Y + N D S F +D T + P+
Sbjct: 724 GIEVKENLPVGANILFMNATDLDSGFNGKLVYAISGGNDD--SCFTIDMETGVLKVLSPL 781
Query: 77 QDEG-------------GLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
E G+ A +++ V D ND PEF Y V E ++
Sbjct: 782 DREVMDKYTLNITVYDLGIPQKAAWRLLDVTVLDANDNAPEFLQESYFVEVSEDKEVNSE 841
Query: 120 VGRVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ +V ATD D G + V Y++ D F +D+ TG ++ + LD E Q ++ ++
Sbjct: 842 IIQVEATDKDLGPSGHVTYAILTDTEKFSIDSMTGVVKIIQPLDREVQPVHYLKI 896
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 26/174 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
+L Y A+ + E+G + V A D+DSG+ G + Y L +++ +F + P+
Sbjct: 2085 NLPYYAVVKVDAEVGHVIRYVTAIDRDSGRNGDIHYYLKEHH----DHFQIGPSGDISLK 2140
Query: 71 ---EHQG---------PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
EH +D G + +A V + +T +N P F+ Y +PE +
Sbjct: 2141 KQFEHDTLNKEYLVTVVAKDGGSPAFSAEVLVPITVMNKAMPVFEKAFYSAEIPENIQ-M 2199
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
VH A+ + V+YS+ + P F ++ NTG + LD+E Y
Sbjct: 2200 HSPVVH-IQANSPEGLKVFYSITDGDPFSQFTINFNTGVVNVIAPLDFESHPAY 2252
Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY 137
+G + V I+V D ND P+F + YE +VPE + + + ++ A D DE +N ++Y
Sbjct: 1435 DGTTTILTQVLIKVIDTNDHRPQFSTSKYEVAVPEDTEPEVEILQISAVDRDE-KNKLIY 1493
Query: 138 YSVPEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERVFL 175
P F +D TG + T + LD+E ++ V +
Sbjct: 1494 TLQSSIDPASLKKFRLDPATGALYTAEKLDHEAIHQHVLTVMV 1536
Score = 39.3 bits (90), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 23/160 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + +G ++QV+ATD DS + Y+L+ N++ + +F++D T
Sbjct: 2290 YSTTLSEASVIGTPVLQVRATDSDSEPNRGISYQLIGNHSKSHDHFHIDSNTGLISLVRA 2349
Query: 71 -------EHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
+H+ ++ +GG LSS V + VTD+ND P F+ YE + E G
Sbjct: 2350 LDYEQSQQHRIFVRAVDGGMPALSSDVVVTVAVTDLNDNPPLFEQQVYEARISEHAAHGH 2409
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
V V A DAD + YS+ + F++D TG I
Sbjct: 2410 FVMCVRACDADSSDLDKLEYSILSGNDHKSFIIDRETGII 2449
Score = 38.9 bits (89), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 30/170 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDN---------------------NTDAASYFNLDP 68
G ++M V A D+D+G+ G + Y + D + ++ S++ L
Sbjct: 1051 GSSVMTVSAHDEDTGRDGEIRYSIRDGSGIGVFRIDEETGVIETSDRLDRESTSHYWLTV 1110
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
QG + LSS V I V D+ND P+ Y + E ++V ++ A D
Sbjct: 1111 YATDQGVVP----LSSFIEVYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAFD 1166
Query: 128 ADEGQNAVVYYSVPEDIP---FVVDANTGDI-RTNKALDYEKQQLYLERV 173
D N + Y + P F + TG I T++ LD E+Q ++ V
Sbjct: 1167 PDSSSNDKLTYRITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILEV 1216
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 29/148 (19%)
Query: 34 MQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQGPI 76
+ ++ATD D L+ Y++++ + +YF +DP T +
Sbjct: 1794 LVIRATDADRESNALLVYQIVEPSVH--NYFAIDPTTGAIRTVLSLDYEETHAFHFTVQV 1851
Query: 77 QDEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFS--VPEGQDGLAVGRVHATDADE 130
D G A V + V DIND P F YE S +P + G+ V V+ATDAD
Sbjct: 1852 HDMGTPRLFAEYAANVTVHVIDINDCPPVFSKSLYEVSLLLPTYR-GVNVITVNATDADS 1910
Query: 131 GQNAVVYYSVPEDI---PFVVDANTGDI 155
+ V YS+ E F +D TG I
Sbjct: 1911 KAFSQVMYSITEGNIGEKFSMDHKTGTI 1938
Score = 35.8 bits (81), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 72/182 (39%), Gaps = 23/182 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF-------------- 64
Y A + G +M V+A D DS +EY +L N D S+
Sbjct: 2397 YEARISEHAAHGHFVMCVRACDADSSDLDKLEYSILSGN-DHKSFIIDRETGIITLSNLR 2455
Query: 65 --NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
L P + D G S+A VN+ V N +P F YE + E V
Sbjct: 2456 RHTLKPFYSLNVSVSD-GVFRSSARVNVTVMGGNLHSPVFHQNEYEVELAENAPLHTLVV 2514
Query: 122 RVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
+V A+D D G + V Y + D F V+ + G I T + LD E + + L++K
Sbjct: 2515 QVKASDRDSGIYSHVTYHIVNDFAKDRFYVN-DRGQIFTLEKLDRETPAEKVISIRLMAK 2573
Query: 179 FA 180
A
Sbjct: 2574 DA 2575
>gi|301769907|ref|XP_002920372.1| PREDICTED: protocadherin Fat 4-like [Ailuropoda melanoleuca]
gi|281339428|gb|EFB15012.1| hypothetical protein PANDA_009099 [Ailuropoda melanoleuca]
Length = 4980
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ A D D G LV Y ++ D+ F +DP + E +
Sbjct: 1756 GSKIMQLTAMDADEGANALVTYTIISGADDS---FRIDPESGDLIATKRLDRERRSKYSL 1812
Query: 78 ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G SS +NI V+D+ND P+F Y F +PE G V + ATD D G
Sbjct: 1813 LVRADDGLQSSDMRINITVSDVNDHIPKFSRPVYSFDIPEDTTPGSLVAAILATDDDSGV 1872
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y V ED F ++ TG + LDYE QQ Y+ V
Sbjct: 1873 NGEITYIVNEDDEDGIFFLNPVTGVFNLTRVLDYEAQQYYILTV 1916
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 81/170 (47%), Gaps = 22/170 (12%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL+ Y + N + A + +
Sbjct: 3096 ATIPESHGIGAIVRTVSARDRDAAMNGLISYSISSGNEEGIFAINSSTGVLTLAKALDYE 3155
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
+H+ I D G +S T +V + V D+ND +P F Y +V E G V
Sbjct: 3156 LCQKHEMTISATDGGWVSRTGYCSVTVNVIDVNDNSPVFFPDEYFPTVLENAPSGTTVIH 3215
Query: 123 VHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y++ D+ FV+D NTG I T LD+E +Q Y
Sbjct: 3216 LNATDADSGTNAVIAYTIQSSDSDL-FVIDPNTGVITTQGFLDFETKQSY 3264
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 23/162 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI----QDEGGL--- 82
G L+ ++ATD+D G G V + L + TD S F LDP + I ++E
Sbjct: 599 GTELLVLRATDRDLGDNGTVRFSLQEAETDQRS-FRLDPVSGKLSTIASLDREEQAFYSL 657
Query: 83 ------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
SS +N+ + D+ND +P F + Y + E + G + + V ATD D
Sbjct: 658 LVLATDLGSPPQSSMVRINVSLLDVNDNSPVFYPIQYFAHIQENEPGGSYITTVSATDPD 717
Query: 130 EGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G N + YS+ + F V+A +G I T ALD E++ Y
Sbjct: 718 LGLNGTIKYSISAGDRSRFQVNAQSGVISTRMALDREEKTAY 759
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 75/173 (43%), Gaps = 21/173 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN------TDAASY-------- 63
FY A + +++V A+D D G GL+ Y ++ N D+ S
Sbjct: 1214 FYQATISESAANLTQVLRVSASDVDEGNNGLIHYSVMKGNEERQFAIDSTSGQVTLIGKL 1273
Query: 64 -FNLDPATEHQGPIQDEGGLS--STATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
+ PA D G +S ST T+NI + D ND P F V E + G
Sbjct: 1274 DYEATPAYSLVIQAVDSGAVSLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGEL 1333
Query: 120 VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V ATD+D G NA ++YS+ F + NTG I K LD+E Q LY
Sbjct: 1334 VSSVTATDSDSGDNADLHYSITGTNNHGTFSISPNTGSIFLAKKLDFETQSLY 1386
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN--------LDPATEHQGP-------IQ 77
++ V A DKDSG G ++Y +++ N + + N + P + P
Sbjct: 2687 ILTVSAMDKDSGPNGQLDYEIVNGNKEHSFAINHATGEIRSIRPLDREKIPQYVLTIKSS 2746
Query: 78 DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNA 134
D+G S + +V I + D ND P F + + VPE G V RV +D D G NA
Sbjct: 2747 DKGSPSQSTSVKVIINILDENDNAPRFSQI-FSAYVPENSPLGYTVTRVTTSDEDIGINA 2805
Query: 135 VVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V YS+ + +PF ++ +TGDI ++ L+ E Y RV
Sbjct: 2806 VSRYSITDTSLPFTINPSTGDIVISRPLNREDTDRYRIRV 2845
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 74/168 (44%), Gaps = 22/168 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y + TD + F ++P+T
Sbjct: 2774 SQIFSAYVPENSPLGYTVTRVTTSDEDIGINAVSRYSI----TDTSLPFTINPSTGDIVI 2829
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P+ E G + + V I VTD+ND P F Y PE + G
Sbjct: 2830 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDVNDNAPRFSRPSYYLDCPELPEIGS 2889
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
V +V ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 2890 KVTQVSATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQVLKYQN 2937
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 83/188 (44%), Gaps = 23/188 (12%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYF---NLDPAT 70
D L Y + + +V+A DKDSG G + Y + + NT DA F L +
Sbjct: 997 DQLSYEVTLSESEPVNSRFFKVQAFDKDSGANGEIAYSIAEGNTGDAFGIFPDGQLYIKS 1056
Query: 71 EHQGPIQDE------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E +QD LS+T V + + D+ND P F S Y F E Q G
Sbjct: 1057 ELDRELQDRYVLLVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEEEQRAG 1116
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLER---V 173
VG+V+A D D G N V YS P FV+ A +G+I + D ++ L +R V
Sbjct: 1117 SFVGKVNAIDKDFGPNGEVRYSFEMVQPDFVLHAISGEITNTRQFD--RESLMRQRGTAV 1174
Query: 174 FLISKFAT 181
F + AT
Sbjct: 1175 FSFTVIAT 1182
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 71/163 (43%), Gaps = 33/163 (20%)
Query: 38 ATDKDSGKFGL--VEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGGLSSTAT--- 87
ATD D G G+ YR++ N A F LD G + +GGL T
Sbjct: 159 ATDSDIGSNGVDHRSYRIIQGN--EAGRFRLDITLNPSGEGAFLHLVSKGGLDREVTPQY 216
Query: 88 -------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
VN+ V DIND P F S Y+ VPE G +V +V A D
Sbjct: 217 QLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAAVGSSVLQVAAAD 276
Query: 128 ADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ADEG NA + Y + E PF +D TG I + LD+E ++ Y
Sbjct: 277 ADEGTNADIRYRLQDEGTPFQMDPETGLITVREPLDFEARRQY 319
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 71/157 (45%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +ATD DSG +EY LL+ + S +D G + D
Sbjct: 2069 VFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATD 2128
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y+ + E G + +V+A D DEG N
Sbjct: 2129 KGQPALSSSTEVVVMVLDINDNNPVFVQPLYKVEINENTLTGTDIIQVYAADGDEGTNGQ 2188
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y + + + F +D+ TG I K LD EK Y
Sbjct: 2189 VRYGIVDGNANQEFRIDSVTGAITVAKPLDREKTPTY 2225
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPIQ---- 77
T++QV A D D G + Y L N D A + LD T+ +
Sbjct: 2278 TILQVVARDDDQGSNSKLSYVLFGGNEDNAFTLSASGELRVIQSLDRETKEHFVLMITAT 2337
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNA 134
D G L+ T T+N+ V DIND P F S Y ++PE G V V+A+DAD NA
Sbjct: 2338 DSGSPALTGTGTINVIVDDINDNVPTFASKMYFTTIPEDAPTGTDVLLVNASDADASTNA 2397
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V+ + + F ++ +TG I T+ LD E ++ Y
Sbjct: 2398 VIRI-IGGNSQFTINPSTGQIITSALLDRETKENY 2431
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 76/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP T G I +G L
Sbjct: 3210 GTTVIHLNATDADSGTNAVIAYTIQSSDSD---LFVIDPNT---GVITTQGFLDFETKQS 3263
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
S ATVNI++ N+ P F S Y F + E G VG V A+
Sbjct: 3264 YHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGTIVGEVFAS 3323
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F ++ TG I + LD EK+ ERV L
Sbjct: 3324 DRDLGMDGEVHYLIFGNSRKKGFQINKKTGQIYVSGLLDREKE----ERVSL 3371
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 79/165 (47%), Gaps = 27/165 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGPI--- 76
G ++QV A D D G G V Y ++D N A F +D P + P
Sbjct: 2170 GTDIIQVYAADGDEGTNGQVRYGIVDGN--ANQEFRIDSVTGAITVAKPLDREKTPTYSL 2227
Query: 77 ----QDEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATDA 128
D G + T+TV+I + DIND P F+ PY +VPE L + +V A D
Sbjct: 2228 TVQAADRGSTPRTDTSTVSIVLLDINDFVPTFELSPYSVNVPENLGTLPRTILQVVARDD 2287
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D+G N+ + Y + ED F + A +G++R ++LD E ++ ++
Sbjct: 2288 DQGSNSKLSYVLFGGNEDNAFTLSA-SGELRVIQSLDRETKEHFV 2331
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 79/162 (48%), Gaps = 22/162 (13%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQGPI 76
++G L++V A D +D G VEY + LDN+T S +L + +Q +
Sbjct: 2997 KVGTKLIKVTAVDDRDFGLNSEVEYLISNENHFGKFKLDNSTGWISVASLLISDLNQNFL 3056
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D+G LSS ATV I VT+ N PEF ++PE G V V A D
Sbjct: 3057 ITVTARDKGNPPLSSQATVQIIVTEENYHTPEFSQNHMSATIPESHGIGAIVRTVSARDR 3116
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQ 167
D N ++ YS+ E+ F ++++TG + KALDYE Q
Sbjct: 3117 DAAMNGLISYSISSGNEEGIFAINSSTGVLTLAKALDYELCQ 3158
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L ATV++ + DIND P+F Y+ ++ E L V RV A+D DEG N +++YSV
Sbjct: 1190 LKDQATVHVYMKDINDNAPKFLKDFYQATISESAANLTQVLRVSASDVDEGNNGLIHYSV 1249
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
E+ F +D+ +G + LDYE Y
Sbjct: 1250 MKGNEERQFAIDSTSGQVTLIGKLDYEATPAY 1281
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 68/171 (39%), Gaps = 32/171 (18%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPATEHQGPIQ 77
+ + G ++ Q KA D D G G+V Y L N N + L P H G Q
Sbjct: 904 ENWQAGHSIFQAKAVDPDEGVNGMVLYSLKQNPKNLFTINEKNGNISLLGPLDVHAGSYQ 963
Query: 78 DE--------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
E LSS+ + + V D+ND P F L YE ++ E + +V A D
Sbjct: 964 IEILASDMGVPQLSSSFILTVYVHDVNDNPPVFDQLSYEVTLSESEPVNSRFFKVQAFDK 1023
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLYL 170
D G N + YS+ E NTGD + LD E Q Y+
Sbjct: 1024 DSGANGEIAYSIAE-------GNTGDAFGIFPDGQLYIKSELDRELQDRYV 1067
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V I + DIND P F + + +V E DG + ++ A DADEG NA+V Y++
Sbjct: 1724 AEVEITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDADEGANALVTYTIISGA 1783
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D +GD+ K LD E++ Y
Sbjct: 1784 DDSFRIDPESGDLIATKRLDRERRSKY 1810
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LSS+ +V + VTD+ND P FQ PY +P G V V TDAD G N+ ++YS+
Sbjct: 2446 LSSSTSVLVTVTDVNDNPPRFQHHPYVTHIPSPTPPGSFVFAVTVTDADIGPNSELHYSL 2505
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV- 140
LSS +++ V D+ND +P F+ P+ + E + V A D D G N + Y +
Sbjct: 2649 LSSYEKLDLTVLDVNDNSPVFKEDPFVSEILENLSPRKILTVSAMDKDSGPNGQLDYEIV 2708
Query: 141 --PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
++ F ++ TG+IR+ + LD EK Y+
Sbjct: 2709 NGNKEHSFAINHATGEIRSIRPLDREKIPQYV 2740
Score = 43.1 bits (100), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 9/157 (5%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDE 79
G+++ +L + + T G F + + + + AS + + + +Q +
Sbjct: 813 GSVSASTMDLNSNISYLITTGDQKGMFAINQ---VTGHLTTASVIDREEQSFYQLKVVAS 869
Query: 80 GG-LSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVY 137
GG ++ VNI V D+ND +P F Q++ V Q G ++ + A D DEG N +V
Sbjct: 870 GGTVTGDTMVNITVKDLNDNSPHFLQAVESVNVVENWQAGHSIFQAKAVDPDEGVNGMVL 929
Query: 138 YSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
YS+ P+++ F ++ G+I LD +E
Sbjct: 930 YSLKQNPKNL-FTINEKNGNISLLGPLDVHAGSYQIE 965
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 71/173 (41%), Gaps = 25/173 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNN----------TDAASYFNLDP 68
LG T++ TD D G + Y + +D N ++ S++NL
Sbjct: 1959 LGSTVLVFNVTDADDGINSQLAYSIASGDGLGQFTVDKNGVLKVLKSLDRESQSFYNL-V 2017
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
H P+ +STA V+I + D+ND P F S P +PE V + ATD
Sbjct: 2018 VQVHDLPMLPASRFTSTAHVSIILLDVNDNPPTFLS-PKLTYIPENTPIDTIVFKAQATD 2076
Query: 128 ADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
D G N+ + Y++ P F + G++R LD E+ Y V K
Sbjct: 2077 PDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATDK 2129
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIP 145
V I VTD+ND P F S + P G + + A D DEG N V Y + +
Sbjct: 1515 VTILVTDLNDNVPMFISQNALAADPSAVIGSVLTTIMAADPDEGANGEVEYEIINGDTDT 1574
Query: 146 FVVDANTGDIRTNKAL 161
F+VD +GD+R AL
Sbjct: 1575 FIVDRYSGDLRVASAL 1590
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV 140
SS A++ I V DIND P F Y ++ E G V V ATD D G NA + YS+
Sbjct: 456 SSVASLVIFVNDINDHPPIFAQQVYRVNLSEEAPPGSYVSGVSATDGDSGLNANLRYSI 514
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 67/174 (38%), Gaps = 20/174 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD----------AASYFNLD- 67
Y A ++ G + V ATD D G G ++Y + + ++ LD
Sbjct: 694 YFAHIQENEPGGSYITTVSATDPDLGLNGTIKYSISAGDRSRFQVNAQSGVISTRMALDR 753
Query: 68 ---PATEHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A + Q D G L S A V I V D D P F Y F V E G VG
Sbjct: 754 EEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAYSFVVFENVALGYHVG 813
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A+ D N + Y D F ++ TG + T +D E+Q Y +V
Sbjct: 814 SVSASTMDLNSN-ISYLITTGDQKGMFAINQVTGHLTTASVIDREEQSFYQLKV 866
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 67/166 (40%), Gaps = 26/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG-- 74
+G + V ATD DSG + Y + N F++ P T E Q
Sbjct: 1329 RIGELVSSVTATDSDSGDNADLHYSITGTNNHGT--FSISPNTGSIFLAKKLDFETQSLY 1386
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G SST +V I V D ND P F S+ E G +V V A D
Sbjct: 1387 KLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGTSVISVTAHD 1446
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D N + Y++ + +P F +D G I T+ +D E L+
Sbjct: 1447 PDADINGQLSYTIIQQMPRGNHFGIDEVKGTIFTSAEIDREFANLF 1492
>gi|116110536|gb|ABJ74647.1| stan [Drosophila miranda]
gi|116110538|gb|ABJ74648.1| stan [Drosophila miranda]
gi|116110540|gb|ABJ74649.1| stan [Drosophila miranda]
gi|116110542|gb|ABJ74650.1| stan [Drosophila miranda]
gi|116110544|gb|ABJ74651.1| stan [Drosophila miranda]
gi|116110546|gb|ABJ74652.1| stan [Drosophila miranda]
gi|116110548|gb|ABJ74653.1| stan [Drosophila miranda]
gi|116110550|gb|ABJ74654.1| stan [Drosophila miranda]
gi|116110552|gb|ABJ74655.1| stan [Drosophila miranda]
gi|116110554|gb|ABJ74656.1| stan [Drosophila miranda]
gi|116110558|gb|ABJ74658.1| stan [Drosophila miranda]
gi|116110560|gb|ABJ74659.1| stan [Drosophila miranda]
gi|116110562|gb|ABJ74660.1| stan [Drosophila miranda]
gi|116110564|gb|ABJ74661.1| stan [Drosophila miranda]
gi|116110566|gb|ABJ74662.1| stan [Drosophila miranda]
gi|116110568|gb|ABJ74663.1| stan [Drosophila miranda]
gi|116110570|gb|ABJ74664.1| stan [Drosophila miranda]
Length = 549
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 65/132 (49%), Gaps = 21/132 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP----------------ATEH 72
+G +++QV A D D G G ++Y L D + + S+ +DP A H
Sbjct: 208 VGTSVIQVSACDPDIGLNGRIKYLLSDRDVEDGSFL-IDPTSGTVRTNKGLDRESVAVYH 266
Query: 73 QGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
I + G LSS+ V IR+ D+ND P F S VPE G VG +HA D
Sbjct: 267 LTAIAVDKGSPPLSSSVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDP 326
Query: 129 DEGQNAVVYYSV 140
DEG NAVV+YS+
Sbjct: 327 DEGVNAVVHYSI 338
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPATEH--- 72
Y A + +G T++ V ATD D G + Y L + N + F+++P T
Sbjct: 88 YSASVFEDAPVGTTVLVVSATDSDVGINAQITYSLNEESINGLGSPDPFSINPQTGAIVT 147
Query: 73 QGPIQDE-------------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
P+ E GG LS T V I VTD+ND P F++ Y+ S+ E
Sbjct: 148 NAPLDRETTSGYLLTVTSKDGGSPSLSDTTDVEISVTDVNDNAPVFKNPLYQSSILEDAL 207
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G +V +V A D D G N + Y + ED F++D +G +RTNK LD E +Y
Sbjct: 208 VGTSVIQVSACDPDIGLNGRIKYLLSDRDVEDGSFLIDPTSGTVRTNKGLDRESVAVY 265
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG S TATV+I +TD N+ P F++ PY SV E G V V ATD+D G NA +
Sbjct: 59 DSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGINAQI 118
Query: 137 YYSVPEDI--------PFVVDANTGDIRTNKALDYEKQQLYLERV 173
YS+ E+ PF ++ TG I TN LD E YL V
Sbjct: 119 TYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTV 163
>gi|157114247|ref|XP_001658006.1| cadherin [Aedes aegypti]
gi|108883612|gb|EAT47837.1| AAEL001074-PA [Aedes aegypti]
Length = 1752
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 84/173 (48%), Gaps = 26/173 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDN----NTDAASYFNLD-------------PAT 70
E+G ++++ A+D+D K +V Y +++ + + +SYF +D P
Sbjct: 1053 EIGKVILKLTASDEDFDKNSMVFYEIVNQEELPSKNRSSYFKIDRSSGELKAVKRLPPEA 1112
Query: 71 EHQGPI--QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ---DGLAVGRVHA 125
E I +D GGL+ ++ ++ D+ND +P F+ Y F V EG G +VG+V A
Sbjct: 1113 EIHLNISAKDVGGLTDVISLEFKIYDVNDNSPVFEQQWYTFKVEEGNYPITGKSVGQVRA 1172
Query: 126 TDADEGQNA-VVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
TD D G N V Y + ED IPF + G IR + +D E Y +V
Sbjct: 1173 TDEDLGMNGNVSYLLLAEDDTKIPFSISPLDGTIRVSGEIDRESVSSYHFKVL 1225
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 69/175 (39%), Gaps = 36/175 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA---------------SYFNLDPATEHQG 74
G +++QV A D+D G+ Y L + N A +Y + +
Sbjct: 302 GFSILQVNAIDRDQGENAEFYYYLANENPKGAFVIDHMSGWIVVNDETYLDKEARNSLHM 361
Query: 75 PIQ--------DEGGLSSTATVNIRVTDINDKNPEF-QSLPYEF----SVPEGQDGLAVG 121
+ D T V I + D ND PEF Q YEF S P G VG
Sbjct: 362 TVNAMERIEQVDRSRNYGTVQVEITLLDTNDNTPEFEQGTLYEFKANCSSPVGS---KVG 418
Query: 122 RVHATDADEGQNAVVYYSVPE-----DIPFVVDANTGDIRTNKALDYEKQQLYLE 171
+ A D D+ N V Y + IPF +D +TGDI+ + L Y K ++E
Sbjct: 419 SIKAVDPDDLGNGQVQYHIKNVRPNLAIPFKLDPDTGDIKVTEPLTYGKIAFFVE 473
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVP 141
++ A V + + D+ND PEF+ Y S+ E G ++ +V+A D D+G+NA YY +
Sbjct: 267 NALARVEMEIIDLNDNLPEFEVDLYNISIIENLPKGFSILQVNAIDRDQGENAEFYYYLA 326
Query: 142 EDIP---FVVDANTGDIRTN 158
+ P FV+D +G I N
Sbjct: 327 NENPKGAFVIDHMSGWIVVN 346
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 33/169 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------------ 70
+G + +KA D D G V+Y + + + A F LDP T
Sbjct: 413 VGSKVGSIKAVDPDDLGNGQVQYHIKNVRPNLAIPFKLDPDTGDIKVTEPLTYGKIAFFV 472
Query: 71 ----EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD---GLAVGRV 123
+ Q P + + + T++I I + EF PYEF V G D G ++G++
Sbjct: 473 EARDQPQNPSESRFNV-ALVTIDIVCQSIEEI--EFIGAPYEFWV--GADAPIGASIGQI 527
Query: 124 HATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
T + + + +S PE +PF ++ +G + + LD ++ Y
Sbjct: 528 RTTFDSNTEEEIFFDLLHSYPEGVPFAIEERSGIVTVIEVLDKFDRRCY 576
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ--DGLAVGRVHATDADEGQ--NAVVYY 138
SS T+ + V DIND +PEF +LPY ++ E + + R+ A D D+ N+ + Y
Sbjct: 38 SSFFTITVYVEDINDNDPEFINLPYAITLDESTPIETVVFNRIKAIDRDKPNTPNSDIEY 97
Query: 139 SV-PE-----DIPFVVDANTG-DIRTNKALDYE 164
++ P+ D PF ++++ + + LDY+
Sbjct: 98 AIAPKQLKSGDFPFRLESSQKPKLILQRPLDYD 130
Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 12/91 (13%)
Query: 90 IRVTDINDKNPEFQSL--PYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PED 143
I+V D+ND P F+ P VP+ + G +V +V A D D G N + YS+ P
Sbjct: 1500 IKVMDVNDNAPIFRENDGPIIAVVPDRANYGYSVLKVEAYDQDAGSNGEIRYSLLNEPAR 1559
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
+ F VDA TG IR +L Y +RVF
Sbjct: 1560 L-FDVDALTGQIRLLSSLIN-----YQDRVF 1584
>gi|156382383|ref|XP_001632533.1| predicted protein [Nematostella vectensis]
gi|156219590|gb|EDO40470.1| predicted protein [Nematostella vectensis]
Length = 2676
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 84/184 (45%), Gaps = 35/184 (19%)
Query: 16 SLFYGAMARDKHELGVT-----LMQVKATDKDSGKFGLVEYRLLDNNTDAASY------- 63
S +G + H L T +++V ATD DSG+ G + Y D+ D + +
Sbjct: 909 SPVFGNWSYTAHVLETTPPDSNIIEVVATDVDSGENGRISY-AFDSKVDTSKFGLRNGGK 967
Query: 64 --------------FNLDP-ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYE 108
+NL A +H P + SS+A V + V D+ND NP FQ Y
Sbjct: 968 IFIKSKLDREDIEEYNLKVIAIDHGTPRR-----SSSADVKVIVDDVNDNNPHFQQASYA 1022
Query: 109 FSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQ 166
F V E + +G V A+D+DEG N V Y + F+VD TG I T++ LD E +
Sbjct: 1023 FFVKENEPVATYLGAVSASDSDEGSNGHVTYRFDTQVAQFIVDKQTGKITTSQVLDREAK 1082
Query: 167 QLYL 170
Y+
Sbjct: 1083 ASYV 1086
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 77/163 (47%), Gaps = 20/163 (12%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPIQ 77
+G ++ Q+KA D+DS KF + + + N D + LD T+ +
Sbjct: 613 RIGQSICQLKAIDRDSPKFAITRFIIEQGNADEVFSVDGSGLITLAKLLDRETQDNYLLT 672
Query: 78 ----DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV-GRVHATDADE 130
D GG S A VNI V D+ND+ P F Y F++ E L+V G VHA D+
Sbjct: 673 VKAVDGGGQDSVNKAIVNITVLDVNDEPPIFSKAEYNFTIQEHSQALSVIGHVHAISRDK 732
Query: 131 GQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEK-QQLYL 170
G NA V YS+ + V+ +TG + +D+EK LYL
Sbjct: 733 GTNAEVVYSISKGNTDNIVLINSTGTLYLQSEVDHEKIPSLYL 775
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 7/89 (7%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV-----P 141
++I V D ND PEF ++ Y ++PE D G ++ +V A+D D G NA + YS+ P
Sbjct: 158 LSITVEDTNDNKPEFSNVSYSGTIPENIDVGTSILQVSASDKDIGTNAEIQYSIETHSDP 217
Query: 142 EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ I F + TG I N LDYE ++ YL
Sbjct: 218 QAI-FGIHPTTGVIVNNVRLDYEAKRSYL 245
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 25/162 (15%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASY---FNLDPAT----------EHQGP------- 75
V A D+D G + Y + N T++ SY F +DP++ Q P
Sbjct: 411 VNAVDQDFGSNSELVYTIA-NTTESRSYLHWFAIDPSSGMITTATDLDREQIPQVVLTVL 469
Query: 76 IQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQ 132
+ D G LS +V + +TD ND +P F Y S+ E G V ++ A D D G+
Sbjct: 470 VHDRGSPPLSDNCSVIVNLTDSNDNDPYFNQSSYNASLFENSPSGSPVVQLLAQDPDIGE 529
Query: 133 NAVVYYSV-PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
N+++ YS+ + PF +D G + ++ LD+E Q Y +V
Sbjct: 530 NSLILYSILTPNTPFFLDPRKGLVTNSRTLDHEVQSSYTFQV 571
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 38/193 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + ++G +++QV A+DKD G ++Y + + ++D + F + P T
Sbjct: 177 YSGTIPENIDVGTSILQVSASDKDIGTNAEIQYSI-ETHSDPQAIFGIHPTTGVIVNNVR 235
Query: 71 -EHQGP--------IQDEGG---LSSTATVNIRVTDINDKNPEFQ---SLPYEFSVPEGQ 115
+++ +D+G LSS+A V I V D+ND NP +L + V E
Sbjct: 236 LDYEAKRSYLIVVKAEDKGSSHQLSSSAIVRIEVLDVNDNNPVIHVSYTLGGSYQVTENA 295
Query: 116 D-GLAVGRVHATDADEGQNAVV---------YYSVPEDIPFVVDANTGDIRTNKALDYEK 165
G V RV +DAD G+N V Y+S + F V + I ++LD E
Sbjct: 296 TIGTQVARVSVSDADSGKNGEVNVTLEGGDGYFS----MKFDVLNDESIIAVGQSLDRET 351
Query: 166 QQLYLERVFLISK 178
+ + I K
Sbjct: 352 HDHFFLKAVCIDK 364
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 74/169 (43%), Gaps = 22/169 (13%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLL---------DNNTDAASYFNL----DPATEHQGP 75
+G T V D DSG G V + LL D+NT A S L + A + P
Sbjct: 822 IGHTFYTVSVFDADSGVLGRVSFSLLSNPGTLFNLDSNTGALSLTKLIDYGNSARSYTLP 881
Query: 76 IQDEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADE 130
+Q + G SSTA + ++V D+ND +P F + Y V E + + V ATD D
Sbjct: 882 VQAQDGGSPPRSSTAMLELKVVDVNDYSPVFGNWSYTAHVLETTPPDSNIIEVVATDVDS 941
Query: 131 GQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
G+N + Y+ + F + N G I LD E + Y +V I
Sbjct: 942 GENGRISYAFDSKVDTSKFGL-RNGGKIFIKSKLDREDIEEYNLKVIAI 989
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 76/176 (43%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------A 69
Y A + G ++Q+ A D D G+ L+ Y +L NT F LDP
Sbjct: 503 YNASLFENSPSGSPVVQLLAQDPDIGENSLILYSILTPNTP----FFLDPRKGLVTNSRT 558
Query: 70 TEH--------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAV 120
+H Q D GG S ATV++ +TD+ND P F Y E + G ++
Sbjct: 559 LDHEVQSSYTFQVAATDGGGRSCNATVHVSLTDLNDNQPVFDPSSYSVEYFENTRIGQSI 618
Query: 121 GRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
++ A D D + A+ + + + D F VD +G I K LD E Q YL V
Sbjct: 619 CQLKAIDRDSPKFAITRFIIEQGNADEVFSVDG-SGLITLAKLLDRETQDNYLLTV 673
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 76/184 (41%), Gaps = 32/184 (17%)
Query: 11 EMTSDSLFYGAMARDKHELGVTLMQVKATDKDSG----------------KF------GL 48
E T D LF G ++ +K G ++++V A D+DSG KF GL
Sbjct: 1540 EFTRD-LFIGTVSENK-PTGTSVVKVTAYDRDSGSNAELTYSIPSGVEMDKFSIDKHSGL 1597
Query: 49 VEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYE 108
+ + + +YF AT P + S+ +V I V D ND P+F S
Sbjct: 1598 IVTNSILDREKKDTYFLTVHATGVSYPFR-----VSSTSVRINVMDRNDNPPKFISPVVT 1652
Query: 109 FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEK 165
VPE + + D D G N V YS+ D F + +TG++ T LD E
Sbjct: 1653 LKVPENSPARLIYTLTVQDLDYGNNTKVLYSIMSGNTDGAFTIGRSTGELSTTTKLDRET 1712
Query: 166 QQLY 169
+ Y
Sbjct: 1713 KASY 1716
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 32/167 (19%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLS----STATV 88
+ + A D D+G+ G VEYR++ +T F+LD T G ++ G L T+
Sbjct: 1456 VTSITALDPDTGQGGNVEYRIVSPDTGK---FSLDLKT---GVLKLIGSLDYEDVPQYTL 1509
Query: 89 NIRVTDIND------------------KNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
+I TD+ PEF + +V E + G +V +V A D D
Sbjct: 1510 HISATDLGSPPLTSYQLFNVVVVDVNDNPPEFTRDLFIGTVSENKPTGTSVVKVTAYDRD 1569
Query: 130 EGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLYLERV 173
G NA + YS+P + F +D ++G I TN LD EK+ Y V
Sbjct: 1570 SGSNAELTYSIPSGVEMDKFSIDKHSGLIVTNSILDREKKDTYFLTV 1616
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 78 DEGGLSSTATVN---IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
D+GG S T+ I V D+ND P F + +VPE G V V A D+D+G N
Sbjct: 1197 DKGGNQSLETITYIEINVLDVNDNYPVFINETTFKTVPEKLPIGSVVAAVLAVDSDQGDN 1256
Query: 134 AVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V Y + D F ++ TG I T +ALD+E Y+ RV
Sbjct: 1257 GKVRYKIVNGNTDGTFKINETTGVISTLRALDFEVTNRYVLRV 1299
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP---ED 143
V I V+D+ND+ P F Y EG G V V A D D G N V++++ +
Sbjct: 2393 VYINVSDVNDEKPVFGQSGYMAQWSEGIPVGTIVVNVSAADKDSGANGRVWFAIQSGDDK 2452
Query: 144 IPFVVDANTGDIRTNKALDYE 164
F +D TG IRT +ALD+E
Sbjct: 2453 GSFAIDRKTGVIRTQRALDHE 2473
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 72/156 (46%), Gaps = 25/156 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNTD---AASYFNLDPATEHQ--GP 75
G +++ + A+DKDSG G + Y L +D+ T +A+ F E+
Sbjct: 1766 GTSILNLTASDKDSGSNGNIVYTLSNDTYGVYSIDSRTGIVYSAARFETSIKQEYNFFCI 1825
Query: 76 IQDEGGLSSTATVNIRVTDINDKN---PEFQSLPYEFSV-PEGQDGLAVGRVHATDA--D 129
+D+G A V +R+ I DKN P+F PYE + P V V ATDA D
Sbjct: 1826 AKDQGQDPKMAIVPVRI-KIEDKNNHAPQFTKTPYEVHIFPNTSASALVTMVTATDADTD 1884
Query: 130 EGQNAVVYYSVPEDIP----FVVDANTGDIRTNKAL 161
+ N V Y + + FVV++NTG +RT+
Sbjct: 1885 KSTNGKVTYRLDDSKNSTSLFVVESNTGSVRTSAGF 1920
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 23/173 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE----------------HQ 73
G+ +++V ATD+DSG ++Y N+D Y +D T Q
Sbjct: 2217 GIAILRVSATDQDSGSNAQIKYSFPITNSDQIDY-KIDADTGVISARRTIDVRIRDSFIQ 2275
Query: 74 GPIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE 130
P+Q D+G A V +R+ I + P+F+ Y VPE G +V V TD
Sbjct: 2276 IPVQAMDQGVPPQRALVYVRI--IITREPKFELPSYFGKVPENAMMGTSVLTVRVTDNAA 2333
Query: 131 GQN-AVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATS 182
G + Y++ F + +G I NK LDYE ++ +L V I A S
Sbjct: 2334 GLPLGRISYNIENSNYFRIGQRSGVISVNKPLDYETKRRFLLVVSAIDDTAPS 2386
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 26/175 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G ++ V A DKDSG G V + + + D F +D T
Sbjct: 2412 YMAQWSEGIPVGTIVVNVSAADKDSGANGRVWFAI--QSGDDKGSFAIDRKTGVIRTQRA 2469
Query: 71 -------EHQGPIQ--DEGG--LSSTATVNIRVTDINDKNPEFQSL-PYEFSVPEGQD-G 117
H ++ DEG + + +V IRV D+ND P F+ P + V E
Sbjct: 2470 LDHETIKTHHVSVRATDEGSPPMHTDVSVTIRVLDLNDNPPVFRVPGPNDVQVLENLPLN 2529
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ ++ATD D G NA + ++V F++D +G + TN DYE +Y
Sbjct: 2530 SRLYEINATDRDSGANARLSFTVIGGTGQGLFLIDKFSGWLTTNITFDYENTAVY 2584
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 73/178 (41%), Gaps = 36/178 (20%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN------------------- 65
+K +G + V A D D G G V Y++++ NTD N
Sbjct: 1235 EKLPIGSVVAAVLAVDSDQGDNGKVRYKIVNGNTDGTFKINETTGVISTLRALDFEVTNR 1294
Query: 66 --LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLP-----YEFSVPEGQDGL 118
L + G Q + +S V I V D ND P F P YE +VP +
Sbjct: 1295 YVLRVSATDMGKKQQK---TSYQLVTIYVEDANDNRPTFDKNPIITWIYE-NVPINTN-- 1348
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
V + A D D G N+ ++Y++ P F +++ TG I+T +D E+ Y +V
Sbjct: 1349 -VTTIKAHDDDSGLNSRIWYTIDSQSPRAHFKINSETGLIQTTHPIDREEISEYSLKV 1405
Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV- 140
L +TAT+ I + D+ND P+F S + + + V + A D D GQ V Y +
Sbjct: 1418 LYNTATLKIIIQDLNDNAPKFVSRNLTYVMEDEPFNFQVTSITALDPDTGQGGNVEYRIV 1477
Query: 141 -PEDIPFVVDANTGDIRTNKALDYE---KQQLYLERVFLISKFATSY 183
P+ F +D TG ++ +LDYE + L++ L S TSY
Sbjct: 1478 SPDTGKFSLDLKTGVLKLIGSLDYEDVPQYTLHISATDLGSPPLTSY 1524
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 66/158 (41%), Gaps = 20/158 (12%)
Query: 26 KHELGVTLM-QVKATDKDSGKFGLVEYRLLDNNTDAASYFN------LDPATEHQG---- 74
+H ++++ V A +D G V Y + NTD N L +H+
Sbjct: 714 EHSQALSVIGHVHAISRDKGTNAEVVYSISKGNTDNIVLINSTGTLYLQSEVDHEKIPSL 773
Query: 75 ----PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+D+G L A V I V DIND +P+F S +PE G V D
Sbjct: 774 YLTVQAKDKGTPPLFGYANVTIAVIDINDNSPQFNSSSILVRLPEDTPIGHTFYTVSVFD 833
Query: 128 ADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDY 163
AD G V +S+ + F +D+NTG + K +DY
Sbjct: 834 ADSGVLGRVSFSLLSNPGTLFNLDSNTGALSLTKLIDY 871
Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-----VGRVHATDADEGQNAVVYYSV-- 140
++I V D ND +P F P +D A V +V ATD D G N V YS+
Sbjct: 2053 LDINVIDRNDNSPAFH--PSNMLAQLAEDTGAFKPRFVVKVTATDVDSGTNGKVTYSIWT 2110
Query: 141 -PEDIPFVVDANTGDIRTNKALDYE 164
E F +D+ TG+I T K LD E
Sbjct: 2111 GNEAGVFTIDSTTGEITTAKLLDRE 2135
Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNAVVYYSV 140
LSS T+ + V D ++ +P F + Y+F VP + G VG+V ATD D G V++
Sbjct: 2600 LSSNITIIVNVADEDEYDPSFNRMDYKFDVPGNAKIGDFVGQVTATDRDSGDQGRVFFVF 2659
Query: 141 --PEDIPFVVDANTGDI 155
P ++A TG I
Sbjct: 2660 YNPTSNALKMNATTGII 2676
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 27/164 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLV-------------EYRLLDNNTDAASYFNLDPATEHQGP 75
+G + +V +D DSGK G V ++ +L++ + A +LD T
Sbjct: 297 IGTQVARVSVSDADSGKNGEVNVTLEGGDGYFSMKFDVLNDESIIAVGQSLDRETHDHFF 356
Query: 76 IQ----DEGGLSSTA--TVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
++ D+G T + I V D+ND P+F YE V E V V+A D
Sbjct: 357 LKAVCIDKGDPPRTTEKSFRINVGDVNDCAPKFDRHTYETRVWENATVNTLVAIVNAVDQ 416
Query: 129 DEGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYEK 165
D G N+ + Y++ F +D ++G I T LD E+
Sbjct: 417 DFGSNSELVYTIANTTESRSYLHWFAIDPSSGMITTATDLDREQ 460
>gi|348586988|ref|XP_003479250.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
[Cavia porcellus]
Length = 2925
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 83/181 (45%), Gaps = 26/181 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS-YFNLDPAT---EHQG 74
Y R+ E+G ++ V+ATD D+ + YRLL+ + S F +DP + +G
Sbjct: 297 YKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGGPSEVFEIDPRSGVIRTRG 356
Query: 75 PI------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D G +TA V + V D ND P+F Y V E
Sbjct: 357 PVDREEVESYKLIVEASDQGRDPGPRGATAAVFLSVEDDNDNAPQFSEKRYIVQVREDVA 416
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLER 172
G + R+ A+D D+G NA+V+YS+ F +DA TG + LDYE + Y R
Sbjct: 417 PGAPILRITASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLR 476
Query: 173 V 173
V
Sbjct: 477 V 477
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LD 67
Y R+ G ++++ A+D+D G LV Y ++ N Y + LD
Sbjct: 407 YIVQVREDVAPGAPILRITASDRDKGSNALVHYSIMSGNARGQFYLDAQTGALDVVSPLD 466
Query: 68 PATEHQGPIQ---DEGG---LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
T + ++ +GG LS+ + V ++V DIND P F S P++ +V E G
Sbjct: 467 YETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYL 526
Query: 120 VGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V V A DAD G NA + Y V D PF ++ TG I LD E+ Y
Sbjct: 527 VLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFY 579
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------------AASYFNLDPATEHQ-- 73
+G +++ V A D+D+ ++ Y++ NT + LD E Q
Sbjct: 628 VGTSVVTVSAVDRDA--HSVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYV 685
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G TA + + VTD N P FQS Y +V E + G V + ATD D G
Sbjct: 686 LAVTASDGTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTG 745
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + IP F +DA+TG + T LDYE Q Y
Sbjct: 746 ENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVSY 784
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 33/181 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPATE---- 71
Y A + G ++ ++A D D G+ G +EY L D+ ++ +F LDP T
Sbjct: 189 YQATVPENQPAGTSVASLRAIDPDEGEAGRLEYTMDALFDSRSN--HFFFLDPVTGVVTT 246
Query: 72 -------------HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ QD G S+ AT+ I VTD ND +P F+ Y+ S+ E +
Sbjct: 247 AEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLE 306
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV-------PEDIPFVVDANTGDIRTNKALDYEKQQL 168
G V V ATD D NA + Y + P ++ F +D +G IRT +D E+ +
Sbjct: 307 VGYEVLTVRATDGDAPPNANILYRLLEGSGGGPSEV-FEIDPRSGVIRTRGPVDREEVES 365
Query: 169 Y 169
Y
Sbjct: 366 Y 366
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLDPATEHQGPIQ-- 77
+++Q+ ATD+DSG G V Y + + LD Q ++
Sbjct: 836 SVLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYSLRAY 895
Query: 78 --DEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G + ++ + VT D+ND P F+ ++ V E GLAV RV ATD DEG
Sbjct: 896 AVDKGMPPARTSMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGT 955
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 956 NAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYEDRPEYI 996
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 28/173 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSSTA 86
G T++ + ATD+D+G+ + Y + D+ F +D A Q + E +S T
Sbjct: 731 GTTVVLISATDEDTGENARITYFM----EDSIPQFRIDADTGAVTTQAELDYEDQVSYTL 786
Query: 87 TVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
+ R V D+ND P+F Y+ SV E +V ++ ATD D
Sbjct: 787 AITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRD 846
Query: 130 EGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N V+Y+ D F+V++ +G +RT + LD E Y R + + K
Sbjct: 847 SGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYSLRAYAVDK 899
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 32/163 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G+ + +V ATD D G + Y++++ N F LD + + D
Sbjct: 939 IGLAVARVTATDPDEGTNAQIMYQIVEGNI--PEVFQLDIFSGELTALVDLDYEDRPEYI 996
Query: 79 ------EGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRV 123
L S ATV++R+ D ND P + F S P G A+GRV
Sbjct: 997 LVIQATSAPLVSRATVHVRLLDRNDNPPVLGNFEILFNNYVTNRSSSFPGG----AIGRV 1052
Query: 124 HATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
A D D + + ++ V ++ +TG++R ++ALD +
Sbjct: 1053 PAHDPDISDSLTYSFERGNELSLVLLNGSTGELRLSRALDNNR 1095
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS 139
GL + R ++N P+FQ Y+ +VPE Q G +V + A D DEG+ + Y+
Sbjct: 164 GLPEESMGGRRKRNVNTA-PQFQPPSYQATVPENQPAGTSVASLRAIDPDEGEAGRLEYT 222
Query: 140 V------PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ + F +D TG + T + LD E + ++ RV
Sbjct: 223 MDALFDSRSNHFFFLDPVTGVVTTAEELDRETKSTHVFRV 262
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 32/136 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASY-------------FN 65
LG ++ V+A D D+G +EYRL ++N T S F
Sbjct: 523 LGYLVLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFYSFG 582
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
++ A +H P L+++A+V++ + D+ND NP F Y + E G +V V
Sbjct: 583 VE-ARDHGTPP-----LTASASVSVTILDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVS 636
Query: 125 ATDADEGQNAVVYYSV 140
A D D ++V+ Y +
Sbjct: 637 AVDRDA--HSVITYQI 650
>gi|391337562|ref|XP_003743136.1| PREDICTED: protocadherin Fat 2-like [Metaseiulus occidentalis]
Length = 1401
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 81/170 (47%), Gaps = 23/170 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-- 76
Y A + +GV + VKA D + G +V Y ++D NT+ A F++D T I
Sbjct: 595 YRASVAEGSPVGVPVTTVKANDPERG---VVYYSIVDGNTNEA--FSIDQETGTVFVIGR 649
Query: 77 ---------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVG 121
D G L + + + VTDIND+ P F Y F V EG VG
Sbjct: 650 LDREAKETYNLTLKAADSGELYNLVPLIVTVTDINDETPVFTENRYVFEVAEGLANTFVG 709
Query: 122 RVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYL 170
+V A+D D G NA + YS+ + F ++ G I T +ALD+E ++ ++
Sbjct: 710 QVKASDRDLGGNAEITYSIEDPASTFAINGANGSIYTRRALDFESEKEFV 759
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 65/150 (43%), Gaps = 15/150 (10%)
Query: 35 QVKATDKDSGKFGLVEYRLLD-------NNTDAASYFN--LDPATEHQGPI------QDE 79
QVKA+D+D G + Y + D N + + Y LD +E + + E
Sbjct: 710 QVKASDRDLGGNAEITYSIEDPASTFAINGANGSIYTRRALDFESEKEFVVIVTATDHGE 769
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYS 139
LS+ VNIRV D D+ P F+ Y+ V E Q + +V ATD D
Sbjct: 770 NALSAKVEVNIRVLDEQDEVPIFEQSHYDVKVNENQPDTFLIQVKATDPDTVDKITYVIK 829
Query: 140 VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ F +D +G I T K LD+E Q +
Sbjct: 830 EGDRRLFYIDPTSGAISTVKGLDFELSQTH 859
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 70/158 (44%), Gaps = 23/158 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI------------ 76
T+ +V+A D D G+ + Y + + + A+ F +DP T + + P+
Sbjct: 504 TVTKVEAADNDEGENAKLTYSIYHISNNGAARFTIDPETGDLKVRTPVDAGEQFSITVQA 563
Query: 77 QDEGGLSSTATVNIRVT-DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNA 134
D GGL S + + V N P F Y SV EG G+ V V A D + G
Sbjct: 564 TDAGGLYSQGIIEVMVIPGPNLGGPIFLQEEYRASVAEGSPVGVPVTTVKANDPERG--- 620
Query: 135 VVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
VVYYS+ + + F +D TG + LD E ++ Y
Sbjct: 621 VVYYSIVDGNTNEAFSIDQETGTVFVIGRLDREAKETY 658
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQ--DGLAVGRVHATDADEGQNAVVYYSVPED-- 143
V +RV D+ND P+F S Y S+ E + ATD+D G N +V Y + E
Sbjct: 125 VLVRVNDVNDNAPQFTSENYTTSISEEAPVGTMVFANFTATDSDSGVNGLVEYFIEETGN 184
Query: 144 -----IPFVVDA-NTGDIRTNKALDYEKQQLYLERVF 174
F +D+ + G + K LDYE+ + YL RV
Sbjct: 185 ADDAASYFSIDSPHQGIVTIKKPLDYEQSKAYLLRVI 221
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 10/93 (10%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGL-AVGRVHATDADEGQNAVVYY 138
GLS + + + DIND +P LP V E DG+ V +V A D DEG+NA + Y
Sbjct: 467 GLSRPIQLRVHLNDINDNSP---VLPLINPVTLESGDGVRTVTKVEAADNDEGENAKLTY 523
Query: 139 SVPE-----DIPFVVDANTGDIRTNKALDYEKQ 166
S+ F +D TGD++ +D +Q
Sbjct: 524 SIYHISNNGAARFTIDPETGDLKVRTPVDAGEQ 556
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 43/92 (46%), Gaps = 29/92 (31%)
Query: 38 ATDKDSGKFGLVEYRLLD--NNTDAASYFNLDPATEHQG------PIQDEGG-------- 81
ATD DSG GLVEY + + N DAASYF++D + HQG P+ E
Sbjct: 164 ATDSDSGVNGLVEYFIEETGNADDAASYFSID--SPHQGIVTIKKPLDYEQSKAYLLRVI 221
Query: 82 -----------LSSTATVNIRVTDINDKNPEF 102
L+ST T+ I V D +D P F
Sbjct: 222 AADRAMKPSDRLTSTTTLTINVEDADDLPPMF 253
Score = 35.8 bits (81), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 18/112 (16%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-------AVG----RVHATDAD- 129
L++ TVN+R D+ND P F P + P G L AVG V A D D
Sbjct: 1097 LTAQLTVNLR--DVNDNRPNFIISPM-VADPTGNSYLGALDIDSAVGTEVITVTAEDMDS 1153
Query: 130 EGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
EG V Y VPE F +D+NTG I + +A D + ++ ++++
Sbjct: 1154 EGNGRVSYEIVPETNKGEFFKIDSNTGAISSARAFDIRQNHTMPIKLKIVAR 1205
>gi|351703794|gb|EHB06713.1| Protocadherin-16 [Heterocephalus glaber]
Length = 3197
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 28/162 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------------HQGP-- 75
G +++V A D D G G V Y L +F++DP + P
Sbjct: 485 GSFVVRVTARDPDQGTNGQVTYSLAPGTH--THWFSIDPTSGIITTAASLDYELEPRPQL 542
Query: 76 --IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ +GGL +S+ATV++ + D+ND P+FQ Y S+PEG Q G +V ATDAD
Sbjct: 543 IVVATDGGLPPLASSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGSCFLQVTATDAD 602
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEK 165
G ++ YS+ + PF +DA++GD+ T + LD ++
Sbjct: 603 SGPFGLLSYSLGAGLGASGPPPFRIDAHSGDVCTTRILDRDQ 644
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 79/177 (44%), Gaps = 27/177 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + R+ G +L+ ++ATD D G G V Y + F+LDP T
Sbjct: 1553 YSVLLRENSPPGTSLLTLRATDPDLGPNGQVTYGGVSGEN-----FSLDPKTGVLTTLRA 1607
Query: 71 ---EHQGPI------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
E Q I +D G L + TV + + D ND P F + VPEGQD
Sbjct: 1608 LDREEQEEINLTVYARDRGSPPLLTHVTVRVAIEDENDHAPTFGNAHLSLEVPEGQDPQT 1667
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ + A+D D G N + Y + + P FV+D ++G+ T + LD E + + R+
Sbjct: 1668 LTTLRASDPDVGANGQLQYRIVDGDPSGAFVLDLDSGEFGTRRPLDREVEPAFQLRI 1724
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 21/147 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNT--DAASYFNLDPAT-----------EHQGPI 76
G + + A D D+G FG + Y LL+ + F L+ +T EH G
Sbjct: 2621 GTLVTTLHAIDGDAGAFGRLRYSLLEAGPGPEGREAFALNSSTGELRARVPFDYEHTGSF 2680
Query: 77 Q------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ D G LS++ TV++ VT ++ +P F + + F VPEG Q G ++G V ATD D
Sbjct: 2681 RLLVGAADAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQVPEGAQRGHSLGHVQATDED 2740
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDI 155
G + +V YS+ P F ++ TG +
Sbjct: 2741 GGADGLVLYSLATSSPYFGINQTTGAL 2767
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD---------------PATEHQGPI 76
TL ++A+D D G G ++YR++D + A +LD PA + +
Sbjct: 1667 TLTTLRASDPDVGANGQLQYRIVDGDPSGAFVLDLDSGEFGTRRPLDREVEPAFQLRIEA 1726
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQN 133
+D G GLS+T V + V D ND P F Y VPE G + ++ A D D G N
Sbjct: 1727 RDGGQPGLSATVLVTVTVLDANDHAPAFPVPAYSVEVPEDAPAGTLLMQLQAHDPDAGAN 1786
Query: 134 AVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSYL 184
V Y + F+++ +G++RT ALD E Y V + A L
Sbjct: 1787 GHVTYYLGTGTAGAFLLEPTSGELRTATALDREHCSSYAFSVSAVDGAAAGPL 1839
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 66/148 (44%), Gaps = 30/148 (20%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY--------------RLLDNNTDAASY 63
FY A + + G +QV ATD DSG FGL+ Y R+ ++ D +
Sbjct: 578 FYNASLPEGTQPGSCFLQVTATDADSGPFGLLSYSLGAGLGASGPPPFRIDAHSGDVCTT 637
Query: 64 FNLDPATEHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV---P 112
LD QGP D GGL S V + V+D ND P+F P+E++
Sbjct: 638 RILD---RDQGPSSFDFTVTAVDGGGLKSMVYVKVFVSDENDNPPQF--YPWEYAASLSA 692
Query: 113 EGQDGLAVGRVHATDADEGQNAVVYYSV 140
+ G AV RV A D D+G + + Y +
Sbjct: 693 QSTPGTAVLRVRAHDPDQGPHGRLSYHI 720
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 67/158 (42%), Gaps = 30/158 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G LMQ++A D D+G G V Y L T A F L+P + EH
Sbjct: 1770 GTLLMQLQAHDPDAGANGHVTYYL---GTGTAGAFLLEPTSGELRTATALDREHCSSYAF 1826
Query: 78 --------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-----GQDGLAVGRVH 124
G LS+T V I V D+ND P F + P +P LA+G +
Sbjct: 1827 SVSAVDGAAAGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGPSLSTPTLALGTLR 1886
Query: 125 ATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKA 160
A D D G NA + Y + P VD+ TG+IR ++
Sbjct: 1887 AEDRDAGANASILYRLAGLPPPGTTVDSYTGEIRMARS 1924
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 72/160 (45%), Gaps = 24/160 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDA---ASYFNLDPATEHQGP 75
+G L+ V+A+D D G GLV + L LD ++ A A + + HQ
Sbjct: 2516 VGAELLHVEASDADPGPHGLVRFTLSSGDPLGLFELDESSGALRLAHPLDCETQARHQLV 2575
Query: 76 IQ--DEGGLS-STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEG 131
+Q D G + A V + V D+ND P F S+ E Q G V +HA D D G
Sbjct: 2576 VQAADPAGTHFALAPVTVEVQDVNDHGPAFPLNLLSTSLAENQPPGTLVTTLHAIDGDAG 2635
Query: 132 QNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYE 164
+ YS+ E P F ++++TG++R DYE
Sbjct: 2636 AFGRLRYSLLEAGPGPEGREAFALNSSTGELRARVPFDYE 2675
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 74/167 (44%), Gaps = 32/167 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGPIQDE------- 79
G ++QV+A D V Y L + A++ F L+P + Q P+ E
Sbjct: 1012 GTQVLQVQAQAPDGSP---VTYHLAADG--ASNPFGLEPQSGWLWVQAPLDRESQELYTL 1066
Query: 80 ------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
G +STATV + + + ND +P P SV E Q G +VG+V AT
Sbjct: 1067 KIMAVSGSRAELGQQTSTATVRVSILNQNDHSPRLSEEPTFLSVAENQPPGTSVGQVFAT 1126
Query: 127 DADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
D D G N + YS+ + F + TG++ T + LD E+Q +
Sbjct: 1127 DRDSGPNGRLTYSLRQLSEDSKAFRIHPQTGEVTTLQTLDREQQSSF 1173
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 79 EGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNA 134
+GGL + A +++ + DIND P F Y V E G V +V A+DAD G N
Sbjct: 225 DGGLPPRKAQALLDVTLLDINDHAPAFNQSRYHAVVSETLAPGSPVLQVFASDADAGANG 284
Query: 135 VVYYSVPE-----DIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y + D PF +D TG +R + LD+E+++++
Sbjct: 285 AVTYEINRRQSEGDGPFTIDPRTGLLRLERPLDFEQRRVH 324
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 79/172 (45%), Gaps = 35/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G ++ QV ATD+DSG G + Y L + D+ + F + P T E Q Q
Sbjct: 1117 GTSVGQVFATDRDSGPNGRLTYSLRQLSEDSKA-FRIHPQTGEVTTLQTLDREQQSSFQL 1175
Query: 78 ----DEGGL---SSTATVNIRVTDINDKNPEF--------QSLPYEF--SVPEGQDGLAV 120
+GG S+T TV+I V D+ND +P F LP + VP G V
Sbjct: 1176 LVQVQDGGSPPHSTTGTVHIAVLDLNDNSPTFLQASGAAGGGLPIQVPDRVPPGT---LV 1232
Query: 121 GRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ A D DEG+N + Y++ P F + ++G++ T +L ++ Y+
Sbjct: 1233 TTLQAKDPDEGENGTILYTLTGPGSELFSLHPHSGELHTAASLIRAERPHYV 1284
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 77/190 (40%), Gaps = 40/190 (21%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKF-GLVEYRLLDNNTDAASYFNLDP----ATEH 72
FY + G TL+ ++ATD D + V+Y ++ N F L+P A E
Sbjct: 2385 FYRVAVSEDLPPGSTLLTLEATDADGSRIHATVDYSIISGNR--GRVFQLEPRLAEAGEG 2442
Query: 73 QGP---------------------------IQDEGGLSSTATVNIRVT--DINDKNPEFQ 103
GP D G S ++ V + VT D+ND P F
Sbjct: 2443 VGPGPQALGCLVLLEPLDFESLTQYNLTVAAADRGQPSRSSAVPVTVTVLDVNDNPPVFT 2502
Query: 104 SLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNK 159
Y +VPE G + V A+DAD G + +V +++ P F +D ++G +R
Sbjct: 2503 QASYRVTVPEDMPVGAELLHVEASDADPGPHGLVRFTLSSGDPLGLFELDESSGALRLAH 2562
Query: 160 ALDYEKQQLY 169
LD E Q +
Sbjct: 2563 PLDCETQARH 2572
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 70/160 (43%), Gaps = 27/160 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYFN-LDP----------- 68
G + + A D D G+ V YRL L ++T A S LD
Sbjct: 1460 GPVALHLVARDPDLGEAARVSYRLAAGGDGHFRLHSSTGALSVVRPLDREQRAEHILTVV 1519
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
A++H P + SST + + V D+ND+ P FQ Y + E G ++ + ATD
Sbjct: 1520 ASDHGSPPR-----SSTQLLTVSVVDVNDEAPAFQQQDYSVLLRENSPPGTSLLTLRATD 1574
Query: 128 ADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQ 167
D G N V Y F +D TG + T +ALD E+Q+
Sbjct: 1575 PDLGPNGQVTYGGVSGENFSLDPKTGVLTTLRALDREEQE 1614
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 78/179 (43%), Gaps = 32/179 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG---- 74
Y A + G +++V+A D D G G + Y +L N+ F LD EH G
Sbjct: 686 YAASLSAQSTPGTAVLRVRAHDPDQGPHGRLSYHILAGNS--PPLFALD---EHSGLLTV 740
Query: 75 --PI--------------QDEGGLS--STATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ +D GGL ++A VNI + P F+ L Y FSVPE
Sbjct: 741 AWPLARRANSVVQLEIGARDGGGLKAETSARVNISIVPGTPTPPIFEQLQYVFSVPEDVA 800
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
G +VG V A + G+ V ++ P F +D+ +G ++T + LD E LE
Sbjct: 801 PGTSVGVVQAHNP-PGRLGPVTLALSGGDPRGLFSLDSASGLLQTLRPLDRELLGSVLE 858
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 68/148 (45%), Gaps = 30/148 (20%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------- 68
Y M + G ++ V ATD+DSG G + Y L A FN+DP
Sbjct: 2279 LYQVMLLEHTPPGSAILSVSATDRDSGANGHISYHL----ASPAEGFNVDPNNGTLFTTM 2334
Query: 69 ---ATEHQGP--------IQDEGG--LSSTATVNIRVTDINDKNPEFQSLP-YEFSVPEG 114
A H+GP +D G ++ ATV++++ D ND P F +LP Y +V E
Sbjct: 2335 GTLALGHEGPGVVDVVLEARDHGAPVRAAQATVHVQLKDQNDHAPSF-TLPFYRVAVSED 2393
Query: 115 -QDGLAVGRVHATDADEGQ-NAVVYYSV 140
G + + ATDAD + +A V YS+
Sbjct: 2394 LPPGSTLLTLEATDADGSRIHATVDYSI 2421
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 70/180 (38%), Gaps = 39/180 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + L L+QV+A D D G G + Y L + A F++DP
Sbjct: 2075 YVAFLPESRPLEGPLLQVEADDLDQGSGGQISYSLAASQP-ARGLFHVDPATGTITTTAI 2133
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
AT+ P L +AT+ + V D ND P P+E V E
Sbjct: 2134 LDREIWAETRIVLMATDRGSP-----ALVGSATLTVMVIDTNDNRPTIPQ-PWELRVSED 2187
Query: 114 GQDGLAVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + +V D D G V++Y S P+D PF + G + LD+E+ Y
Sbjct: 2188 ALLGSEIAQVTGNDVDSG--PVLWYVLSPSGPQD-PFSIGRYGGRVSLTGPLDFEQCDHY 2244
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 15/93 (16%)
Query: 82 LSSTATVNIRVTDINDKNPEF-------QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
L + A + +TD+ND P F + LP E ++P G V RV A D D+G N
Sbjct: 448 LRAEAAFVLHITDVNDNAPTFDRQLYRPEPLP-EVALP----GSFVVRVTARDPDQGTNG 502
Query: 135 VVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
V YS+ F +D +G I T +LDYE
Sbjct: 503 QVTYSLAPGTHTHWFSIDPTSGIITTAASLDYE 535
>gi|51262103|gb|AAH79887.1| Fat4 protein, partial [Mus musculus]
Length = 2019
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 26/172 (15%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL+ Y ++ N + A + +
Sbjct: 136 ATIPESHSIGSVVRTVSARDRDTAMNGLISYNIISGNEEGIFAINSSTGVVTLAKALDYE 195
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEF---SVPEGQDGLAV 120
+++H+ I D G ++ T ++ + V D+ND +P F +P EF + G V
Sbjct: 196 MSSKHEMTISATDGGWVARTGYCSLTVSVIDVNDNSPVF--VPDEFFPTVMENAPSGTTV 253
Query: 121 GRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y+V D+ FV+D N G I T LD+E +Q Y
Sbjct: 254 IHLNATDADSGANAVIAYTVQSSDSDL-FVIDPNMGVITTQGFLDFETKQSY 304
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 77/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP + G I +G L
Sbjct: 250 GTTVIHLNATDADSGANAVIAYTVQSSDSD---LFVIDP---NMGVITTQGFLDFETKQS 303
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
S ATV+I++ N+ P F S Y F V E G AVG V A+
Sbjct: 304 YHLTVKAFNVPDEEKCSFATVDIQLKGTNEYVPRFVSKLYYFEVSEAASRGTAVGEVFAS 363
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F ++ TG I + LD EK+ ERV L
Sbjct: 364 DRDMGADGEVHYLIFGNSRKKGFQINKMTGQIYVSGLLDREKE----ERVSL 411
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 77/159 (48%), Gaps = 22/159 (13%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQGPI 76
++G L++V A D KD G VEY + LDN+T S + + +Q +
Sbjct: 37 KVGTKLIKVTAVDDKDFGLNSEVEYFVSDGNHLGKFKLDNDTGWISIASSLVSDLNQNFL 96
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D+G LSS A V+I VT+ N PEF ++PE G V V A D
Sbjct: 97 IRVTAKDKGNPPLSSQAVVHITVTEENYHTPEFSQNHISATIPESHSIGSVVRTVSARDR 156
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
D N ++ Y++ E+ F ++++TG + KALDYE
Sbjct: 157 DTAMNGLISYNIISGNEEGIFAINSSTGVVTLAKALDYE 195
>gi|116110498|gb|ABJ74628.1| stan [Drosophila pseudoobscura]
Length = 549
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 66/132 (50%), Gaps = 21/132 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP----------------ATEH 72
+G +++QV A+D D G G ++Y L D + + S F +DP A H
Sbjct: 208 VGTSVIQVSASDPDIGLNGRIKYLLSDRDVEDGS-FVIDPTSGTVRTNKGLDRESVAVYH 266
Query: 73 QGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
I + G LSS+ V IR+ D+ND P F S VPE G VG +HA D
Sbjct: 267 LTAIAVDKGSPPLSSSVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDP 326
Query: 129 DEGQNAVVYYSV 140
DEG NAVV+YS+
Sbjct: 327 DEGVNAVVHYSI 338
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 83/178 (46%), Gaps = 27/178 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPATEH--- 72
Y A + +G T++ V ATD D G + Y L + N + F+++P T
Sbjct: 88 YSASVFEDAPVGTTVLVVSATDSDVGINAQITYSLNEESINGLGSPDPFSINPQTGAIVT 147
Query: 73 QGPIQDE-------------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
P+ E GG LS T V I VTD+ND P F++ Y+ S+ E
Sbjct: 148 NAPLDRETTSGYLLTVTAKDGGSPSLSDTTDVEISVTDVNDNAPVFKNPLYQSSILEDAL 207
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G +V +V A+D D G N + Y + ED FV+D +G +RTNK LD E +Y
Sbjct: 208 VGTSVIQVSASDPDIGLNGRIKYLLSDRDVEDGSFVIDPTSGTVRTNKGLDRESVAVY 265
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG S TATV+I +TD N+ P F++ PY SV E G V V ATD+D G NA +
Sbjct: 59 DSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGINAQI 118
Query: 137 YYSVPEDI--------PFVVDANTGDIRTNKALDYEKQQLYLERV 173
YS+ E+ PF ++ TG I TN LD E YL V
Sbjct: 119 TYSLNEESINGLGSPDPFSINPQTGAIVTNAPLDRETTSGYLLTV 163
>gi|403283170|ref|XP_003933000.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1, partial
[Saimiri boliviensis boliviensis]
Length = 2759
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 24/174 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA------------ASYFNL 66
Y R+ E+G ++ ++A+D+DS + YR+L D + +
Sbjct: 155 YRERVRENLEVGYEVLTIRASDRDSPVNANMRYRMLGGAWDVFQLNASSGVVSTRAVLDR 214
Query: 67 DPATEHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-- 118
+ A E+Q ++ + G LS+TATV I V D ND P+F Y VPE GL
Sbjct: 215 EEAAEYQLLVEASDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNYVVQVPE-DVGLNT 273
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLY 169
AV RV ATD D+GQNA ++YS+ F + + +G + LD+E Q Y
Sbjct: 274 AVLRVQATDRDQGQNAAIHYSILSGNVAGQFYLHSLSGILDVINPLDFEDVQRY 327
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQ-- 73
+G +++ ++A D+D+ ++ Y+L NT + LD E Q
Sbjct: 499 VGSSVLTLQARDRDANS--VITYQLTGGNTRNRFALSSQRGGGLITLALPLDYKQEQQYV 556
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G S TA V I +TD N P FQS Y SV E + G ++ + A D D G
Sbjct: 557 LAVTASDGTRSHTAHVLINITDANTHRPVFQSSHYTVSVSEDRPVGTSIATLSANDEDTG 616
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + +P F +D ++G + T LDYE Q Y
Sbjct: 617 ENARITYVIQDPVPQFRIDPDSGTMYTMMELDYEHQVAY 655
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 39/180 (21%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN--------LDP-----ATEHQGP 75
L +++V+ATD+D G+ + Y +L N Y + ++P +
Sbjct: 271 LNTAVLRVQATDRDQGQNAAIHYSILSGNVAGQFYLHSLSGILDVINPLDFEDVQRYSLS 330
Query: 76 IQDEGG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
I+ + G ++S+ V+++V D+ND P F S P++ +V E G +V + A DAD
Sbjct: 331 IKAQDGGRPPLINSSGVVSVQVLDVNDNEPIFVSSPFQATVLENVPLGYSVVHIQAVDAD 390
Query: 130 EGQNAVVYYS-------------------VPE-DIPFVVDANTGDIRTNKALDYEKQQLY 169
G+NA + Y VP D PF + ++G I LD E+ + Y
Sbjct: 391 SGENARLRYRLVDTASAFLGGGSAGPKNPVPAPDFPFQIHNSSGWITLCAELDREEVEHY 450
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 73/167 (43%), Gaps = 33/167 (19%)
Query: 32 TLMQVKATDKDSGKFGLVEY------------------------RLLDNNTDAASYFNLD 67
+++QV ATD+DSG G + Y R LD A +NL
Sbjct: 707 SILQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRENVAV--YNLW 764
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
+G LS++ V + + DIND P F+ E V E G V ++ A
Sbjct: 765 AVAVDRG---SPAALSASVEVQVTILDINDNAPMFEKDELELFVEENNPVGSVVAKIRAQ 821
Query: 127 DADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
D DEG NA + Y + E D+ F +D GD+R LD+E ++ Y+
Sbjct: 822 DPDEGPNAQIMYQIVEGDMRHFFQLDLLNGDLRALVELDFEVRREYV 868
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y + +G ++ + A D+D+G+ + Y + D F +DP +
Sbjct: 588 SSHYTVSVSEDRPVGTSIATLSANDEDTGENARITYVI----QDPVPQFRIDPDSGTMYT 643
Query: 71 ------EHQGPIQ------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
EHQ D G S T T+ I + D ND P+F Y+ S+ E
Sbjct: 644 MMELDYEHQVAYTLTITALDNGIPQKSDTTTLEILILDANDNAPQFLWDFYQGSIFEDAP 703
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ +V ATD D G N + Y+ D F ++ +G IRT + LD E +Y
Sbjct: 704 PSTSILQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRENVAVY 761
Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
S+T + + V D ND +P F+ Y V E + G V + A+D D NA + Y +
Sbjct: 131 SATTYITVLVKDTNDHSPVFEQSEYRERVRENLEVGYEVLTIRASDRDSPVNANMRYRML 190
Query: 141 --PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D+ F ++A++G + T LD E+ Y
Sbjct: 191 GGAWDV-FQLNASSGVVSTRAVLDREEAAEY 220
>gi|403309423|ref|XP_003945098.1| PREDICTED: protocadherin alpha-8 [Saimiri boliviensis boliviensis]
Length = 605
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 73/147 (49%), Gaps = 13/147 (8%)
Query: 34 MQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVT 93
+ VK D+ + GL+ + LD DA ++ AT+ P L+ T + + V
Sbjct: 180 LDVKINSDDNKQIGLILRKSLDRE-DAPAHNLFLTATDGGKP-----ELTGTVQLLVTVL 233
Query: 94 DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------F 146
D+ND P F+ YE + E D G AV R++A+D DEG N + YS +P F
Sbjct: 234 DVNDNAPTFEQSEYEVRIFENSDNGTAVIRLNASDRDEGANGAISYSFNSLVPTIVVDQF 293
Query: 147 VVDANTGDIRTNKALDYEKQQLYLERV 173
+D NTG+I LD+E+ LY R+
Sbjct: 294 SIDPNTGEIVIRGNLDFEQVNLYKIRI 320
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
L +TA+V++ V D+ND P F Y V E G + V A DAD +NA+V YS+
Sbjct: 435 LWATASVSVEVADVNDNAPVFAQPEYTVFVKENNPPGCHIFTVSARDADAQENALVSYSL 494
Query: 141 PE 142
E
Sbjct: 495 VE 496
Score = 38.9 bits (89), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 54/143 (37%), Gaps = 31/143 (21%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNN---TDAASYFNLDPATEHQGPIQDEGGL---- 82
G ++++ A+D+D G G + Y N+ T F++DP T G I G L
Sbjct: 258 GTAVIRLNASDRDEGANGAISYSF--NSLVPTIVVDQFSIDPNT---GEIVIRGNLDFEQ 312
Query: 83 ------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+ TV +RV D ND PE V E Q G + +
Sbjct: 313 VNLYKIRIDATDKGHPPMAGHCTVLVRVLDKNDNIPEIALTSLSLPVREDAQFGTVIALI 372
Query: 124 HATDADEGQNAVVYYSVPEDIPF 146
D D G N V S+ +PF
Sbjct: 373 SVNDLDSGANGQVTCSLTPHVPF 395
>gi|269995999|ref|NP_001019303.2| protocadherin beta-8 precursor [Pan troglodytes]
Length = 801
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 75/172 (43%), Gaps = 20/172 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY A + + +++V ATD D+G G + Y L + + + F +D T
Sbjct: 247 FYRAQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFTVDFLTGEIRLKK 306
Query: 71 ----------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
E +D GG S TV I+V D+ND PE + +PE V
Sbjct: 307 QLDFEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVV 366
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
+D D G+N + S+ ED+PF++ ++ G+ + T LD E + Y
Sbjct: 367 ALFSVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEY 418
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
S TA V I V D+ND PEF+ Y + E V +V ATD D G N + YS+
Sbjct: 224 SGTAQVYIEVVDVNDNAPEFEQPFYRAQISEDSPISFLVVKVSATDVDTGVNGEISYSLF 283
Query: 141 --PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
++I F VD TG+IR K LD+EK Q Y
Sbjct: 284 QASDEISKTFTVDFLTGEIRLKKQLDFEKFQSY 316
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 78/187 (41%), Gaps = 35/187 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL-------------DNNTDAASYFN 65
Y R+ + + + V ATD+DSG V Y LL NTD F
Sbjct: 457 YTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQNPHLPLASLVSINTDNGHLFA 516
Query: 66 LDP-------ATEHQGPIQDEG--GLSSTATVNIRVTDINDKNP------EFQSLPYEFS 110
L A E + D G LSS A V + V D ND +P + S P
Sbjct: 517 LRSLDYEALQAFEFRVGASDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNSSAPCTEL 576
Query: 111 VPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL---DY 163
VP + G V +V A D D GQNA + Y + E F V A+ G++RT + L D
Sbjct: 577 VPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDA 636
Query: 164 EKQQLYL 170
KQ+L +
Sbjct: 637 AKQRLVV 643
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS 139
GL++ + + V+D+ND P F Y V E L +G V ATD D G NA V YS
Sbjct: 431 GLTTHLNMTVLVSDVNDNAPAFTQASYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS 490
Query: 140 V--PED--IPFV----VDANTGDIRTNKALDYEKQQLYLERV 173
+ P++ +P ++ + G + ++LDYE Q + RV
Sbjct: 491 LLPPQNPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRV 532
>gi|116110496|gb|ABJ74627.1| stan [Drosophila affinis]
Length = 549
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 66/132 (50%), Gaps = 21/132 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP----------------ATEH 72
+G +++QV A+D D G G ++Y L D + + S F +DP A H
Sbjct: 208 VGTSVIQVSASDPDIGLNGRIKYLLSDRDVEDGS-FVIDPTSGTVRTNKGLDRESVAVYH 266
Query: 73 QGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
I + G LSS+ V IR+ D+ND P F S VPE G VG +HA D
Sbjct: 267 LTAIAVDKGSPPLSSSVEVQIRLEDVNDSPPTFASDKITLYVPENSPVGSVVGEIHAHDP 326
Query: 129 DEGQNAVVYYSV 140
DEG NAVV+YS+
Sbjct: 327 DEGVNAVVHYSI 338
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 83/178 (46%), Gaps = 27/178 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPATEH--- 72
Y A + +G T++ V ATD D G + Y L + N + F+++P T
Sbjct: 88 YSASVFEDAPVGTTVLVVSATDSDVGINAQITYSLNEESINGLGSPDPFSINPQTGAIIT 147
Query: 73 QGPIQDE-------------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
P+ E GG LS T V I VTD+ND P F++ Y+ S+ E
Sbjct: 148 NAPLDRETTSGYLLTVTAKDGGSPSLSDTTDVEISVTDVNDNAPVFKNPLYQSSILEDAL 207
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G +V +V A+D D G N + Y + ED FV+D +G +RTNK LD E +Y
Sbjct: 208 VGTSVIQVSASDPDIGLNGRIKYLLSDRDVEDGSFVIDPTSGTVRTNKGLDRESVAVY 265
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D GG S TATV+I +TD N+ P F++ PY SV E G V V ATD+D G NA +
Sbjct: 59 DSGGRSDTATVHINITDANNFAPIFENAPYSASVFEDAPVGTTVLVVSATDSDVGINAQI 118
Query: 137 YYSVPEDI--------PFVVDANTGDIRTNKALDYEKQQLYLERV 173
YS+ E+ PF ++ TG I TN LD E YL V
Sbjct: 119 TYSLNEESINGLGSPDPFSINPQTGAIITNAPLDRETTSGYLLTV 163
>gi|327265474|ref|XP_003217533.1| PREDICTED: protocadherin Fat 2-like, partial [Anolis carolinensis]
Length = 2916
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE 142
S A V I V DIND P F+++PY ++ +G + G + +V ATD D G N V++YS E
Sbjct: 618 SQAIVKIHVDDINDNPPHFENVPYYIAIQDGTEPGDVIFQVSATDKDSGNNGVIFYSFVE 677
Query: 143 DIP-FVVDANTGDIRTNKALDYEKQQLYLERV 173
D F +D GDI K LD++ Y+ RV
Sbjct: 678 DYKYFWIDPYLGDISLKKPLDFQALNKYILRV 709
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 25/168 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN------------NTDAASYFNL 66
Y A+ + E+G ++++ ATDKD G +G V+Y +++ + +
Sbjct: 1052 YEAVLAENAEIGTKVIELLATDKDDGPYGTVDYIIINKLGQEKFAIDEMGRIETLQKLDR 1111
Query: 67 DPATEHQGPI----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVG 121
+ +TE I +D GG + TV I + D ND P+F++ Y SV +G V
Sbjct: 1112 ENSTERVIAIKIMAKDAGGKVAFCTVKIILADENDNPPQFKASEYVLSVQSNVSEGSPVI 1171
Query: 122 RVHATDADEGQNAVVYYSVP-------EDIPFVVDANTGDIRTNKALD 162
+V A DADEG NA V YSV ED+ ++ TG ++ ++L+
Sbjct: 1172 QVLAYDADEGVNADVIYSVDSVDEVIVEDV-IEINTATGVVKVKESLN 1218
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 76 IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNA 134
I +G + V I V D+ND +PE + PY+ + E G +V +V ATDAD G N
Sbjct: 1552 IASDGKFQAATEVEISVLDVNDNSPECKQTPYKTKIVEDASQGFSVLKVSATDADVGSNG 1611
Query: 135 VVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ Y++ P F +D +TG++ T LD E + Y
Sbjct: 1612 QIIYTLHGPGAEDFRLDPHTGELNTFALLDRELKPQY 1648
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 8/102 (7%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
L S ++NI V D+ND P F++ PY V E G V +V A D D G + V YS+
Sbjct: 1345 LVSLVSINIHVKDVNDNKPVFEANPYRAFVMENMPTGTTVIQVTANDQDTGSDGQVTYSL 1404
Query: 141 ---PEDIP--FVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
P++I F +D+ +G I T K LD E Q+ Y + F+++
Sbjct: 1405 RSEPDNIRKLFTIDSESGWITTLKELDCEVQETY--KFFVVA 1444
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYS 139
G S A V + + D+ND P F + Y SV E + + ++ A D D G+N ++ Y
Sbjct: 817 GAFSEAVVEVEIEDVNDNRPAFSQMVYIASVSESMPPRSPIIQLFANDRDSGRNRLISYQ 876
Query: 140 VPEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ E+ F +D++TG+I T + +DYE Q + +V
Sbjct: 877 ILEERSNASKFFTIDSSTGEITTTQVIDYEANQEFYIKV 915
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN---------TDAASYFN--LD 67
Y + ++ LG ++ + + +D+ + ++Y +++ N T Y N LD
Sbjct: 1790 YVIVVQEDVALGTDVLNLASLTRDNAQSTEIKYEIMNGNDHGKFRLHPTTGILYINESLD 1849
Query: 68 PATEHQGPIQDEG------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVG 121
H+ + EG LS A V I VTDIND P+F Y V + ++ AVG
Sbjct: 1850 FEISHEYYLSVEGTRKSSVSLSDIAMVIINVTDINDHVPKFSQDLY---VADTREDAAVG 1906
Query: 122 R----VHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
V A D D N + YS+ P F++D TG+IR K LD E+ Y +V
Sbjct: 1907 EIVLTVLADDKDGVMNNQITYSIVAGNPLSHFIIDPQTGEIRIAKYLDREEISSYSLKV 1965
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 23/148 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++Q+ A D+DSG+ L+ Y++L+ ++A+ +F +D +T Q
Sbjct: 857 IIQLFANDRDSGRNRLISYQILEERSNASKFFTIDSSTGEITTTQVIDYEANQEFYIKVR 916
Query: 78 --DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQ 132
D G LSS V I V D+ND P+F Y+ +V E G V +V A D D
Sbjct: 917 AMDHGVPPLSSETLVAITVLDVNDNPPKFSQPQYQANVSEIVSCGHVVIKVQAFDPDSWN 976
Query: 133 NAVVYYSV---PEDIPFVVDANTGDIRT 157
+ + Y + E F +++ +G I T
Sbjct: 977 TSKLEYLILSGNEKRHFTINSTSGIIST 1004
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 74/187 (39%), Gaps = 35/187 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + G T++QV A D+D+G G V Y L + F +D
Sbjct: 1370 YRAFVMENMPTGTTVIQVTANDQDTGSDGQVTYSLRSEPDNIRKLFTIDSESGWITTLKE 1429
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
A++H IQ LSS V + +TD ND P+F S Y+ S+ E
Sbjct: 1430 LDCEVQETYKFFVVASDHGRKIQ----LSSQTLVEVTITDENDNAPQFTSEIYKGSIVEN 1485
Query: 114 GQDGLAVGRVHATDAD--EGQNAVVYYSVPEDI--PFVVDANTGD--IRTNKALDYEKQQ 167
+ GL + + D D E V Y D+ F V+ G+ I + L+ E
Sbjct: 1486 AEPGLMITTLKTIDTDISEQNRQVTCYITEGDVLGQFSVNEVDGEWKILSKAPLNREDTD 1545
Query: 168 LYLERVF 174
YL RV
Sbjct: 1546 KYLLRVI 1552
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 40/171 (23%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS--YFNLDPAT----------------- 70
G ++V ATDKD GK + L ++TD S F +DP++
Sbjct: 31 GTEFLRVSATDKDHGKELIYT---LQSSTDPRSMKLFQIDPSSGALMTVAGLDFQTMSLH 87
Query: 71 -------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR 122
+ +GPI+ + A V I V D N+ P+F SL Y V + G V +
Sbjct: 88 TLTVMVRDQEGPIKRD-----FARVVIHVEDSNNHPPQFTSLHYNAEVLDAAPVGTEVVQ 142
Query: 123 VHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
V A D D+G NA ++Y++ D F ++ +G I ++ L + KQ+ +
Sbjct: 143 VRALDQDQGVNAEIHYNLEAGNNGDF-FTINMFSGIITVSQKLHHSKQERF 192
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 65/154 (42%), Gaps = 27/154 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQG 74
G ++++V ATD D G G + Y L + A F LDP T ++Q
Sbjct: 1594 GFSVLKVSATDADVGSNGQIIYTL---HGPGAEDFRLDPHTGELNTFALLDRELKPQYQL 1650
Query: 75 PIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD---GLAVGRVHATDAD 129
++ D GG + + + D ND P F P +V + + V A DAD
Sbjct: 1651 VVKATDGGGRFCQMDLIVDIEDANDNAPRF--FPSHCAVAIFDNTTINTPIAVVIARDAD 1708
Query: 130 EGQNAVVYYSVPEDIP--FVVDANTGDIRTNKAL 161
EG NA V YS+ E F ++ TG I K L
Sbjct: 1709 EGHNAEVVYSLAESASGHFSIEETTGVIHLEKPL 1742
Score = 42.7 bits (99), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 71/180 (39%), Gaps = 22/180 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN--------LDPAT 70
Y A + G +++V+A D DS +EY +L N N L+
Sbjct: 950 YQANVSEIVSCGHVVIKVQAFDPDSWNTSKLEYLILSGNEKRHFTINSTSGIISTLNRCK 1009
Query: 71 EHQGPIQD------EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRV 123
P D +G +T V I T++N +P FQ YE + E + G V +
Sbjct: 1010 RDLEPFYDLTVSASDGVFKTTVPVYINATNVNKYSPSFQQDVYEAVLAENAEIGTKVIEL 1069
Query: 124 HATDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
ATD D+G V Y + + F +D G I T + LD E ERV I A
Sbjct: 1070 LATDKDDGPYGTVDYIIINKLGQEKFAID-EMGRIETLQKLDRENST---ERVIAIKIMA 1125
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 58/140 (41%), Gaps = 22/140 (15%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A R+ +G ++ V A DKD + Y ++ N S+F +DP T
Sbjct: 1894 LYVADTREDAAVGEIVLTVLADDKDGVMNNQITYSIVAGN--PLSHFIIDPQTGEIRIAK 1951
Query: 71 ------------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ Q + LSS TV IRV+D+ND P F L Y +V E G
Sbjct: 1952 YLDREEISSYSLKVQATDNGQEPLSSDTTVLIRVSDVNDNPPRFFQLNYSAAVQENSPVG 2011
Query: 118 LAVGRVHATDADEGQNAVVY 137
+V + +D D +N Y
Sbjct: 2012 TSVLELVLSDRDSPENGPPY 2031
Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP--- 145
+RV IN P+F YE +PE G RV ATD D G+ + D P
Sbjct: 3 VRVIGINQHAPQFLEYQYEVRIPEDTSPGTEFLRVSATDKDHGKELIYTLQSSTD-PRSM 61
Query: 146 --FVVDANTGDIRTNKALDYEKQQLYLERVFL 175
F +D ++G + T LD++ L+ V +
Sbjct: 62 KLFQIDPSSGALMTVAGLDFQTMSLHTLTVMV 93
Score = 39.3 bits (90), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 71/183 (38%), Gaps = 34/183 (18%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL-LDNNTD--------------- 59
SL Y A D +G ++QV+A D+D G + Y L NN D
Sbjct: 123 SLHYNAEVLDAAPVGTEVVQVRALDQDQGVNAEIHYNLEAGNNGDFFTINMFSGIITVSQ 182
Query: 60 -----AASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
F L E QG Q L +ATVN+ + + P+F Y + E
Sbjct: 183 KLHHSKQERFTLTVKAEDQGFPQ----LKDSATVNVYIKPSDGTPPQFSEEQYVVEISEF 238
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
G +V V AT + V Y + ED F ++ +G I K LD+E+ Y
Sbjct: 239 AAIGSSVILVSATSL-----SSVIYEIKEGDEDGVFSINYQSGLISLQKNLDFEQNSSYQ 293
Query: 171 ERV 173
++
Sbjct: 294 LKI 296
Score = 38.9 bits (89), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 66/165 (40%), Gaps = 24/165 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA---TEHQGP 75
Y +D E G + QV ATDKDSG G++ Y +++ YF +DP + P
Sbjct: 641 YYIAIQDGTEPGDVIFQVSATDKDSGNNGVIFYSFVED----YKYFWIDPYLGDISLKKP 696
Query: 76 I--------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVG 121
+ +D G A + V + NP FQSL Y VPE L
Sbjct: 697 LDFQALNKYILRVTARDAGEPPLYAEEKVLVIVRDKSNPLFQSLFYTVKVPENIP-LYTP 755
Query: 122 RVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYE 164
+H ++Y V E+ F +D TG + +DYE
Sbjct: 756 ILHIQARSPEGLRLIYNIVEEEALKKFNIDFKTGVLMVISQVDYE 800
Score = 35.8 bits (81), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 26/170 (15%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFG-LVEYRLLDNNTDAASYFN---------- 65
L Y A ++ +G +++++ +D+DS + G +++++ N A N
Sbjct: 1998 LNYSAAVQENSPVGTSVLELVLSDRDSPENGPPYSFKIIEGNDGKAFQINQDGVLVTSSI 2057
Query: 66 LDPATEHQ----GPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ---D 116
L+ T+ Q + D G LSS+A VNI+VT + P +LP E +
Sbjct: 2058 LNRRTKEQYLLHVQVTDSGIPPLSSSAFVNIQVTQQSRYPP--SALPLEIFATTNERAFR 2115
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDY 163
G +G++HATD D + ++Y V E + F V A G I + L +
Sbjct: 2116 GGVLGKIHATDRDP-HDTLLYTLVSEALEKRYFSVGATDGKIIADDGLPH 2164
>gi|358413174|ref|XP_003582487.1| PREDICTED: protocadherin alpha-6 [Bos taurus]
gi|359067630|ref|XP_002689290.2| PREDICTED: protocadherin alpha-6 [Bos taurus]
Length = 805
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 69/147 (46%), Gaps = 13/147 (8%)
Query: 34 MQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVT 93
+ VK DS + GLV + LD + NL QG + L+ T + I V
Sbjct: 180 LDVKTNSDDSTQIGLVLRKSLDR--EEVPEHNLLLMATDQGKPE----LTGTVQLLITVL 233
Query: 94 DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------F 146
D+ND P F YE + E D G V RV+A+D DEG N + YS +P F
Sbjct: 234 DVNDNAPSFGQSEYEVKIFENSDNGTIVIRVNASDRDEGANGEISYSFNNLVPATVSNQF 293
Query: 147 VVDANTGDIRTNKALDYEKQQLYLERV 173
+DANTG+I LD+E LY R+
Sbjct: 294 RIDANTGEIVIQGNLDFENMNLYKIRI 320
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 76/176 (43%), Gaps = 36/176 (20%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRL-------------------LDNNTD---AA 61
R+ +LG + + +D DSG G V L LD+ D A
Sbjct: 360 REDAQLGTVIALISVSDLDSGPNGQVTCSLTPYVPFKLVSTFKNYYSLVLDSILDREKVA 419
Query: 62 SYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAV 120
+Y + A + P LS+TA++++ V D+ND P F Y V E G +
Sbjct: 420 NYEVVVTARDRGSP-----SLSATASMSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHI 474
Query: 121 GRVHATDADEGQNAVVYYSVPED-------IPFV-VDANTGDIRTNKALDYEKQQL 168
V A DAD +NA+V YS+ E +V V A +G + + LD+E+ +L
Sbjct: 475 FTVSARDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYALQPLDHEELEL 530
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 68/180 (37%), Gaps = 37/180 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------------NTDAASYFN 65
Y ++ + G + V A D D+ + LV Y L++ + ++ +
Sbjct: 460 YTVFVKENNPPGCHIFTVSARDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYA 519
Query: 66 LDPA-------TEHQGPIQDEG--GLSSTATVNIRVTDINDKNPEF---------QSLPY 107
L P + Q D G L S T+ + V D ND P ++
Sbjct: 520 LQPLDHEELELLQFQVSACDAGVPPLGSNVTLQVFVLDENDNAPALLPPGSGRGPSAVSQ 579
Query: 108 EFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALD 162
S G G V +V A D+D G NA + Y + PF V TG+I T +ALD
Sbjct: 580 VVSRSVGA-GHVVAKVRAVDSDSGYNAWLSYELQPAAGGASSPFRVGLYTGEISTTRALD 638
Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 53/140 (37%), Gaps = 25/140 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G +++V A+D+D G G + Y NN A+ N + G I +G L
Sbjct: 258 GTIVIRVNASDRDEGANGEISYSF--NNLVPATVSNQFRIDANTGEIVIQGNLDFENMNL 315
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHAT 126
+ TV ++V D ND P+ V E Q G + + +
Sbjct: 316 YKIRIEATDKGHPPMAGHCTVLVKVLDKNDNVPQIALTSLSLPVREDAQLGTVIALISVS 375
Query: 127 DADEGQNAVVYYSVPEDIPF 146
D D G N V S+ +PF
Sbjct: 376 DLDSGPNGQVTCSLTPYVPF 395
>gi|119625347|gb|EAX04942.1| dachsous 2 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 3371
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 77/162 (47%), Gaps = 31/162 (19%)
Query: 35 QVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP------IQ 77
++ A D DSGK G + Y LL + +F ++P T EH+G +
Sbjct: 1212 KITAIDMDSGKNGQLLYFLLSD----GKFFKMNPNTGELINWVALDREHRGHHEMTVLVT 1267
Query: 78 DEGGLSSTAT--VNIRVTDINDKNPEF-QSLP---YEFSVPEGQD-GLAVGRVHATDADE 130
D G AT V + VTDIND P F Q LP V EGQ + V V A D DE
Sbjct: 1268 DRGSPPRNATMAVYVSVTDINDNRPFFPQCLPGKELHVKVLEGQPVNMLVTTVFAKDPDE 1327
Query: 131 GQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
G NA V YSV + F +DAN+G+IRT L Y+ + Y
Sbjct: 1328 GNNAEVTYSVSSEDSSDHFKIDANSGEIRTTTILSYDYRPSY 1369
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 74/164 (45%), Gaps = 30/164 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN--NTDAASYFNLDPATEHQGPI 76
Y A + +G +QV A+D DSG +G +EY L D + +A F +DP H G I
Sbjct: 668 YNATIAEHAPVGHCFLQVTASDADSGLYGFIEYSLYDGFLSYEAPQAFRIDP---HDGQI 724
Query: 77 ---------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EG 114
+D GGLS+ A V + + D+ND P F Y S+ E
Sbjct: 725 CVSQDIDRERDPATYDLLVEAKDGGGLSAQAFVRVDLEDVNDNRPVFNPSTYVTSISDET 784
Query: 115 QDGLAVGRVHATDADEG-QNAVVYYSVPEDIP--FVVDANTGDI 155
Q G + V ATD D G V Y +P ++ F +D+ TG I
Sbjct: 785 QPGTEIINVLATDQDSGIYGTVAYELIPGNVSSLFTIDSTTGII 828
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 31/184 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA-------- 69
F A ++ +G + + A D D G+ G V Y +L N + F LD +
Sbjct: 1623 FPNAHVKEDVTVGSLVHHITAHDPDEGRNGKVTYSILSGNENMT--FMLDESSGLLTTTC 1680
Query: 70 -------TEHQGPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
T+H + D+G LSS+ T+ + V D+ND+ P F+ YE SV E Q+ G
Sbjct: 1681 PLDYEMKTQHILTVLALDDGTPALSSSQTLTVTVLDVNDEAPVFKQHLYEASVKENQNPG 1740
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLE 171
V RV A D D G N+ + + + +P F ++++TG++ T LD E Q+++
Sbjct: 1741 EFVTRVEALDRDSGVNSKLQFEI---MPGASFELFEINSDTGEVVTTTILDREIQEVFTL 1797
Query: 172 RVFL 175
RV +
Sbjct: 1798 RVLV 1801
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 29/180 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------- 68
+L+Y + R+ E+G ++ + A DKD G G EY L D +A+ F +DP
Sbjct: 1935 TLYYQSSVREDAEVGTVVLVLSAVDKDEGLNGQTEYFLTD---EASGAFTIDPMSGTLKT 1991
Query: 69 ---------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYE-FSVP 112
A IQ G S+T + + VTD+ND +P + P++ F P
Sbjct: 1992 SNTLDREARSQHTFSAVARDCSIQ--GSRSTTVIIKVYVTDVNDNDPVLEQNPFDVFLSP 2049
Query: 113 EGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLE 171
E V A D D G N V +S E F +D TG+I+ + E ++L+
Sbjct: 2050 ESPTNQTTVIVRADDLDLGPNGTVVFSFAETQSMFSIDKYTGEIQFQQNPSSEYFPIWLQ 2109
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 81/175 (46%), Gaps = 27/175 (15%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA-------------SYF 64
Y A + ++QV ATD DSG GL+EY +L N + A +
Sbjct: 2246 IYQASVSESQLYNAHVIQVFATDLDSGLNGLIEYSILSGNQEEAFQIDALSGVITTKAIL 2305
Query: 65 NLDPATEHQGPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD---G 117
+ + + + +Q D+G LS+T + ++VTDIND P F LP E +V +D G
Sbjct: 2306 DYELTSSYSLIVQATDKGMPRLSNTTVIKVQVTDINDNAPAF--LPSE-AVEITEDSLPG 2362
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ V V D D +A ++ E P F +D NTG + K LD+E+ Y
Sbjct: 2363 VIVTHVSVHDVDL-NSAFIFSFAKESNPGTKFAIDQNTGVVVLVKTLDFEEMTEY 2416
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSG-----KFGLV---EYRLLDNNTDAASYFN---L 66
Y A ++ G + +V+A D+DSG +F ++ + L + N+D L
Sbjct: 1728 LYEASVKENQNPGEFVTRVEALDRDSGVNSKLQFEIMPGASFELFEINSDTGEVVTTTIL 1787
Query: 67 DPATEH----QGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
D + + ++D G LSST T+ V D ND PEF Y+ V E Q+ V
Sbjct: 1788 DREIQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEFIVSSYDIEVLENQEPEVV 1847
Query: 121 GRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEK 165
V A+D D G N V Y + + D F ++ +G++ T +ALD E+
Sbjct: 1848 YTVLASDMDAGNNRAVEYHIIDGNTDECFTINEMSGELSTTRALDREQ 1895
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 25/189 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--TDAASY----FNLDPATE- 71
+ + + + T+ + A D D+G +G + Y ++ T SY F +DP T
Sbjct: 2774 FSCIVPENLPISSTICSINALDFDAGPYGELTYSIVSPCFLTHGMSYDHDLFLIDPLTGD 2833
Query: 72 -HQGPI---------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-G 114
H I +D+G +++ V + + I++ P F Y F++PE
Sbjct: 2834 IHAKQILDYENGNKYCLTVQAKDKGDATASLVVWVDIEGIDEFEPIFTQDQYFFTLPEKN 2893
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEKQQLYLERV 173
+D +GRV A+DAD G + V+ YS+ PF V+ G+I +AL K QL E
Sbjct: 2894 KDRQLIGRVEASDADAGIDGVILYSLGTSSPFFSVNKTNGNIYLIRALPLIKSQLNKEDT 2953
Query: 174 FLISKFATS 182
+ A S
Sbjct: 2954 LEMKIIAHS 2962
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
LSSTA ++I+V D+ND P F SL Y V E G + V A D D G +A + Y++
Sbjct: 2645 LSSTAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGSHITVVSANDRDTGSHAEIIYNI 2704
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEK 165
E F ++ NTG + K LDYEK
Sbjct: 2705 ISGNEKGHFYLEENTGVLYLIKPLDYEK 2732
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 30/156 (19%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------------- 82
V A+D D+G VEY ++D NTD N E G + L
Sbjct: 1850 VLASDMDAGNNRAVEYHIIDGNTDECFTIN-----EMSGELSTTRALDREQISNFTLVIL 1904
Query: 83 ---------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQ 132
SS + +RV D ND +P F +L Y+ SV E + G V + A D DEG
Sbjct: 1905 CSDLGDPPRSSVIHLQVRVLDANDHSPSFPTLYYQSSVREDAEVGTVVLVLSAVDKDEGL 1964
Query: 133 NAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQ 166
N Y + ++ F +D +G ++T+ LD E +
Sbjct: 1965 NGQTEYFLTDEASGAFTIDPMSGTLKTSNTLDREAR 2000
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---PED 143
T I + D+ND NP F S P + G V + A D DEG+N V YS+ E+
Sbjct: 1605 TAQIVILDVNDHNPTFISFPNAHVKEDVTVGSLVHHITAHDPDEGRNGKVTYSILSGNEN 1664
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
+ F++D ++G + T LDYE + ++ V +
Sbjct: 1665 MTFMLDESSGLLTTTCPLDYEMKTQHILTVLAL 1697
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 70/176 (39%), Gaps = 36/176 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-- 76
Y D+ + G ++ V ATD+DSG +G V Y L+ N +S F +D T G I
Sbjct: 776 YVTSISDETQPGTEIINVLATDQDSGIYGTVAYELIPGN--VSSLFTIDSTT---GIIYL 830
Query: 77 ------------------QDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEF----SVP 112
QD GGL++ A V I + EF+ Y F VP
Sbjct: 831 TLPLSHLESTTLLLMVSAQDGGGLTAVINADVTIHIFQTTLAPAEFERPKYTFLVYEDVP 890
Query: 113 EGQDGLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQ 166
E +G V A + + Y D+ F + G IRT K LD+E Q
Sbjct: 891 EDS---PIGTVKAREPLNSSEPIFYRISSGDLGGKFSIHPRLGTIRTRKPLDHETQ 943
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 45/99 (45%), Gaps = 16/99 (16%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV-PEDI 144
+V +RV D ND P F+ Y +V E Q G V RV ATD D G N V YSV +
Sbjct: 281 SVELRVLDENDNPPVFEQDEYRAAVREDAQPGAEVCRVRATDRDLGPNGFVRYSVRARQV 340
Query: 145 P--------------FVVDANTGDIRTNKALDYEKQQLY 169
P F V+ +G +R + LD E Q +
Sbjct: 341 PGAGSGGGALGDAAYFAVEELSGVVRVWRPLDREAQAWH 379
Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 70/183 (38%), Gaps = 30/183 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF----------- 64
SL Y ++ LG + V A D+D+G + Y ++ N Y
Sbjct: 2667 SLSYHTHVKESTPLGSHITVVSANDRDTGSHAEIIYNIISGNEKGHFYLEENTGVLYLIK 2726
Query: 65 --NLDPATEHQGPIQD---EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
+ + T+ +Q E S A V + V D ND P+F + VPE
Sbjct: 2727 PLDYEKMTKFTLTVQASDAEKKHFSFAVVFVSVLDDNDHAPQFMFSSFSCIVPENLPISS 2786
Query: 119 AVGRVHATDADEGQNAVVYYSV------------PEDIPFVVDANTGDIRTNKALDYEKQ 166
+ ++A D D G + YS+ D+ F++D TGDI + LDYE
Sbjct: 2787 TICSINALDFDAGPYGELTYSIVSPCFLTHGMSYDHDL-FLIDPLTGDIHAKQILDYENG 2845
Query: 167 QLY 169
Y
Sbjct: 2846 NKY 2848
Score = 42.4 bits (98), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 23/109 (21%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEG-------QN 133
LS+ T+ +RV D+ND+ P F Y+ SV E G V V A+DADE +
Sbjct: 519 LSTEETLLLRVADLNDQPPLFSQQHYKASVSEAAAPGTVVMWVSASDADEAGSDHAWLRY 578
Query: 134 AVVYYSVPEDI---------------PFVVDANTGDIRTNKALDYEKQQ 167
VV S P ++ F +D+ +G I T + LD E Q+
Sbjct: 579 TVVQLSAPCNLGSLQSKMVHTAECGPSFAIDSESGAISTIRTLDREVQE 627
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPE 142
S+ VNI V D+ND +P F E + + G A+ A D D G+N ++ YS+
Sbjct: 961 SSTEVNITVMDVNDNHPAFLRTSDEIRISQTTPPGTALYLARAEDRDSGRNGLIRYSIAS 1020
Query: 143 DIP--FVVDANTGDIRTNKALDYEKQQ 167
P F +D G + N +L +Q+
Sbjct: 1021 PQPGVFAIDRALGVLFLNGSLGAGEQR 1047
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 76 IQDEGGLSSTAT-VNIRVTDINDKNPEFQS----LPYEFS-VPEGQDGLAVGRVHATDAD 129
I ++G L + +T V +RV D ND +P F L E S VP+G +G++ A D D
Sbjct: 1164 IPEDGFLQNVSTTVIVRVWDENDNSPTFLHDVLFLKVEESPVPQG----VIGKITAIDMD 1219
Query: 130 EGQNA-VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQ 166
G+N ++Y+ + + F ++ NTG++ ALD E +
Sbjct: 1220 SGKNGQLLYFLLSDGKFFKMNPNTGELINWVALDREHR 1257
>gi|281354660|gb|EFB30244.1| hypothetical protein PANDA_019201 [Ailuropoda melanoleuca]
Length = 334
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 70/145 (48%), Gaps = 24/145 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G ++QVKATD D +G R++ + YF++DP T
Sbjct: 165 YVASVPEMSPVGAYVLQVKATDADDPTYG-NSARVVYSILQGQPYFSIDPKTGVIRTALP 223
Query: 71 --------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
++Q IQ + GGL+ T VNI +TD+ND P F + VPE
Sbjct: 224 NMDREVKEQYQVLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPESSP 283
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV 140
G A+GR+ A D D GQNA + Y++
Sbjct: 284 IGSAIGRIRAVDPDFGQNAEIEYNI 308
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY SVPE G V +V ATDAD+ G +A V YS+ + P
Sbjct: 148 IKVQDINDNEPKFLDGPYVASVPEMSPVGAYVLQVKATDADDPTYGNSARVVYSILQGQP 207
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F +D TG IRT +D E ++ Y
Sbjct: 208 YFSIDPKTGVIRTALPNMDREVKEQY 233
>gi|317420089|emb|CBN82125.1| Cadherin-7 [Dicentrarchus labrax]
Length = 768
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 80/172 (46%), Gaps = 32/172 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE---HQGPIQDE------- 79
G T+ QV ATD D FG +L+ + YF+++P T P D
Sbjct: 145 GTTVAQVTATDADDPMFG-NNAKLIYSILQGEPYFSVEPKTGIIVTSWPNMDREAREQYL 203
Query: 80 ------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
GG SS+ TV + +TD+ND P FQ Y F++PE G VGR+ A
Sbjct: 204 VVVQVKDMLGLSGGYSSSTTVTVSLTDVNDNGPTFQHHLYAFAIPENAAVGTTVGRIMAE 263
Query: 127 DADEGQNAVVYYSVPEDI----PFVVDAN----TGDIRTNKALDYEKQQLYL 170
D D G NA + YS+ +D+ F++ + G + K LD+E ++ ++
Sbjct: 264 DGDIGTNARMTYSLEDDLEGSSTFIIKTDPVTQEGVVLLAKPLDFETKRRFV 315
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 52/87 (59%), Gaps = 6/87 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+FQ+ PY S+PE G V +V ATDAD+ G NA + YS+ + P
Sbjct: 117 IKVQDINDNVPQFQNEPYVSSIPEMCPTGTTVAQVTATDADDPMFGNNAKLIYSILQGEP 176
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLYL 170
F V+ TG I T+ +D E ++ YL
Sbjct: 177 YFSVEPKTGIIVTSWPNMDREAREQYL 203
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV 140
S T+ I V D+ D+ P F S YE+ VPE G VG V A D D N + YS+
Sbjct: 335 FSDRTTLKIVVEDV-DEPPVFLSPVYEWKVPENAAAGTVVGIVSARDTDTVNNPI-RYSI 392
Query: 141 PEDI----PFVVDANTGDIRTNKALDYEKQQLY 169
+ F +D N G I KALD E +
Sbjct: 393 DKRSDTTKAFKIDPNNGTITVAKALDRETSNWH 425
>gi|338713600|ref|XP_001502285.3| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-3-like [Equus
caballus]
Length = 806
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 69/160 (43%), Gaps = 26/160 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V A+D D+G FG + Y + + F LDP T G IQ
Sbjct: 266 IVTVSASDLDTGNFGTISYAFFHASEEIRKTFRLDPIT---GDIQLVKYLNFEAINTYEV 322
Query: 78 -----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQ 132
D GGLS +TV I+V D+ND PE +PE V +D D G
Sbjct: 323 NVEAKDGGGLSGKSTVIIQVVDVNDNAPELTVSSITSPIPENSPETVVAVFSVSDLDSGD 382
Query: 133 NAVVYYSVPEDIPFVVDANTGDIRT---NKALDYEKQQLY 169
N + S+ D+PFV+ + + T +ALD EK+ Y
Sbjct: 383 NGKMVCSIENDLPFVLKPSAENFYTLLSEEALDREKRAEY 422
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L + + + V+D+ND P F Y V E L +G V ATD D G NA + YS+
Sbjct: 436 LKTQHNITVLVSDVNDNAPAFTQTSYTLWVRENNSPALHIGSVSATDTDAGANAQLTYSL 495
Query: 141 --PED--IPFV----VDANTGDIRTNKALDYEKQQLY 169
P+D +P ++A+ G + ++LDYE Q +
Sbjct: 496 LPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAF 532
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 85/216 (39%), Gaps = 50/216 (23%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL---DNNTDAASYFNLDPATEHQGP 75
Y R+ + + + V ATD D+G + Y LL D + AS +++ H
Sbjct: 461 YTLWVRENNSPALHIGSVSATDTDAGANAQLTYSLLPPQDPHLPLASLVSINADNGHLFA 520
Query: 76 IQ-----------------DEG--GLSSTATVNIRVTDINDKNP------EFQSLPYEFS 110
++ D G LSS A V + V D ND +P + S P
Sbjct: 521 LRSLDYEALQAFEFGVGATDRGSPALSSQARVRVLVLDANDNSPFVLYPLQNGSAPCTEL 580
Query: 111 VPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL---DY 163
VP + G V +V A D D GQNA + Y + E F V + G++RT + L D
Sbjct: 581 VPRAXEAGYLVTKVVAVDGDSGQNAWLSYQLLKGTEPGLFGVWPHNGEVRTARLLSERDA 640
Query: 164 EKQQLYLE---------------RVFLISKFATSYL 184
K +L ++ V L+ F+ YL
Sbjct: 641 PKHRLLVQVRDNGEPPRSASVTLHVLLVDGFSQPYL 676
Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQ--DGLAVGRVHATDADEGQNAVVYYS--- 139
T V+I+V DIND PEF YE + E + L V V A+D D G + Y+
Sbjct: 230 TVRVHIQVLDINDNAPEFTQSLYEVQILENSPVNSLIV-TVSASDLDTGNFGTISYAFFH 288
Query: 140 VPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
E+I F +D TGDI+ K L++E Y
Sbjct: 289 ASEEIRKTFRLDPITGDIQLVKYLNFEAINTY 320
>gi|355687670|gb|EHH26254.1| hypothetical protein EGK_16173, partial [Macaca mulatta]
Length = 1346
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 77/172 (44%), Gaps = 30/172 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN--NTDAASYFNLDPATEHQGPI 76
Y A + +G +QV A+D DSG +G +EY L D + +A F +DP H G I
Sbjct: 663 YNATIAEHAPVGHCFLQVTASDADSGLYGFIEYSLYDGFLSYEAPQAFRIDP---HDGRI 719
Query: 77 ---------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EG 114
+D GGLS+ A V + + D+ND +P F Y S+ E
Sbjct: 720 CVSQDIDRERDPATYDLLVKAKDGGGLSAQAFVRVDLEDVNDNHPVFNPSTYVTSISGET 779
Query: 115 QDGLAVGRVHATDADEG-QNAVVYYSVPEDIP--FVVDANTGDIRTNKALDY 163
Q G + V ATD D G V Y +P D+ F +D+ TG I L +
Sbjct: 780 QPGTEIINVLATDRDSGIYGTVAYELIPGDVSSLFTIDSTTGIIYLTSPLSH 831
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 35 QVKATDKDSGKFGLVEYRLLDN--------NTDAASYFNLDPATEHQG------PIQDEG 80
++ A D D G+ G + Y LL + NT + SY ++P H+G + D G
Sbjct: 1207 KITAIDMDYGRNGQLLYFLLSDGRFFKMNPNTGSTSY-TIEPNYYHRGYHQMTVLVTDRG 1265
Query: 81 GLSSTATVNI--RVTDINDKNPEF-QSLP---YEFSVPEGQD-GLAVGRVHATDADEGQN 133
AT+ + VTDIND P F Q LP V EGQ + V V A D DEG N
Sbjct: 1266 SPPRNATMVVYASVTDINDNRPFFPQCLPGKELHVKVLEGQPVKMLVTTVFAKDPDEGNN 1325
Query: 134 AVVYYSVPEDIPFVVDANT 152
A V YSV P + T
Sbjct: 1326 AEVIYSVSSARPMPLKGKT 1344
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 18/110 (16%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEG--QNAVVYY 138
LS+ T+ +RV D+ND+ P F Y+ SV E G AV V A+DADE ++A + Y
Sbjct: 519 LSTEETLLLRVADLNDQPPLFSQQHYKASVSEAAAPGTAVMWVSASDADEAGTEHAWLRY 578
Query: 139 SV--------PEDIP-------FVVDANTGDIRTNKALDYEKQQLYLERV 173
++ PE +P F +D +G I T + LD E Q+ RV
Sbjct: 579 TLVQLSAPCNPEALPAAECGPSFAIDPESGVISTIRTLDREVQEAVELRV 628
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 66/162 (40%), Gaps = 30/162 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE---HQGPI---------- 76
G ++ V ATD+DSG +G V Y L+ D +S F +D T P+
Sbjct: 782 GTEIINVLATDRDSGIYGTVAYELIPG--DVSSLFTIDSTTGIIYLTSPLSHLESTTLSL 839
Query: 77 ----QDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEF----SVPEGQDGLAVGRVHAT 126
QD GGL++ A V I + EF+ Y F VPE +G V A
Sbjct: 840 MVSAQDSGGLTAVINAEVTIHIFQTTLAPAEFERPKYTFLVYEDVPEDS---PIGTVKAR 896
Query: 127 DADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQ 166
+ + Y D+ F + G IRT K LD+E Q
Sbjct: 897 EPLNSSEPIFYRISSGDLGGKFSIHPWLGTIRTRKPLDHETQ 938
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 45/99 (45%), Gaps = 16/99 (16%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV-PEDI 144
+V +RV D ND P F+ Y +V E Q G V RV ATD D G N V YS+ +
Sbjct: 281 SVELRVLDENDNPPVFEQDEYRAAVREDAQLGAEVCRVRATDRDLGPNGFVRYSIRARQV 340
Query: 145 P--------------FVVDANTGDIRTNKALDYEKQQLY 169
P F V+ +G +R + LD E Q +
Sbjct: 341 PGAGSGGGALGDAAYFAVEELSGVVRLRRPLDREAQAWH 379
Score = 42.4 bits (98), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPE 142
S+ VNI V D+ND +P F E + + Q G A+ A D D G+N ++ YS+
Sbjct: 956 SSTEVNITVLDVNDNHPAFLRTSDEIRISQTTQPGTALYLARAEDRDSGRNGLLRYSIAS 1015
Query: 143 DIP--FVVDANTGDIRTNKALDY-EKQQLYL 170
P F +D G + N +L E+++L L
Sbjct: 1016 PQPGVFAIDRALGVLFLNGSLGAGERRELTL 1046
Score = 35.4 bits (80), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 57/146 (39%), Gaps = 34/146 (23%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT----------DAASYF---N 65
Y A R+ +LG + +V+ATD+D G G V Y + A+YF
Sbjct: 301 YRAAVREDAQLGAEVCRVRATDRDLGPNGFVRYSIRARQVPGAGSGGGALGDAAYFAVEE 360
Query: 66 LDPATEHQGPIQDE-------------GGLS---STATVNIRVTDINDKNPEFQSLPYE- 108
L + P+ E GG+ +T V+I V D+ND P L
Sbjct: 361 LSGVVRLRRPLDREAQAWHQLVVEARDGGVEPEVATVRVSIAVLDVNDNRPAIHVLFLTE 420
Query: 109 ---FSVPEG-QDGLAVGRVHATDADE 130
V EG + G V RV +DAD
Sbjct: 421 GGLACVSEGARPGDYVARVSVSDADR 446
>gi|291384509|ref|XP_002708817.1| PREDICTED: dachsous 1 [Oryctolagus cuniculus]
Length = 3295
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 81/162 (50%), Gaps = 28/162 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGP- 75
G +++V A D D G G V Y L +F++DP + E Q
Sbjct: 486 GSFVVRVTAQDPDQGTNGQVTYSLAPGAH--TRWFSIDPTSGIITTAASLDYELEPQPQL 543
Query: 76 --IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ +GGL +S+ATV++ + D+ND P+FQ Y S+PEG Q G +V ATDAD
Sbjct: 544 IVVATDGGLPPLASSATVSVALQDVNDNEPQFQKTFYNASLPEGTQPGTCFLQVTATDAD 603
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEK 165
G ++ YS+ + PF +DA +GD+ T + LD ++
Sbjct: 604 SGPFGLLSYSLGAGLGASGSPPFRIDARSGDVCTIRTLDRDQ 645
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 21/147 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNT--DAASYFNLDPAT-----------EHQGPI 76
G + + A D D+G FG + Y LL+ D F L+ +T EH G
Sbjct: 2719 GTLVTTLHAIDGDAGAFGKLHYSLLEAGPGPDGREAFALNSSTGELRARMPFDYEHTGSF 2778
Query: 77 Q------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ D G LS++ TV++ VT ++ +P F + + F VPEG + G ++G V ATD D
Sbjct: 2779 RLLVGAADAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQVPEGARRGHSLGHVQATDED 2838
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDI 155
G + +V YS+ P F ++ TG +
Sbjct: 2839 GGADGLVLYSLATSSPYFGINQTTGAL 2865
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 79/175 (45%), Gaps = 24/175 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG---PIQDE--------- 79
TL ++A+D D G G ++YR+LD D A F LDPA+ G P+ E
Sbjct: 1765 TLTVLRASDPDVGANGQLQYRILDG--DPAGAFVLDPASGEFGTMRPLDREVEPAFQLRI 1822
Query: 80 ----GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEG 131
GG LS+T V + V D ND P F Y VPE G + ++ A D D G
Sbjct: 1823 EARDGGQPALSATLLVTVTVLDANDHAPAFPVPAYSVEVPEDAPAGTLLLQLQAHDPDSG 1882
Query: 132 QNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSYL 184
N V Y + F+++ ++G++RT LD E+ Y V + A L
Sbjct: 1883 ANGRVTYYLGAGTAGVFLLEPSSGELRTVTTLDREQCPSYAFSVTAVDGAAAGPL 1937
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 79/177 (44%), Gaps = 27/177 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + R+ G +L+ ++ATD D G G V Y + + F+LDP T
Sbjct: 1651 YTVLLRENSPPGTSLLTLRATDPDLGANGQVTYGGVSCES-----FSLDPDTGVLTTLRA 1705
Query: 71 ---EHQGPI------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
E Q I +D G L + TV + V D ND P F + VPEGQD
Sbjct: 1706 LDREEQEEISLTVYARDMGSPPLLTHVTVRVTVEDENDHAPTFGNSHLSLEVPEGQDPQT 1765
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ + A+D D G N + Y + + P FV+D +G+ T + LD E + + R+
Sbjct: 1766 LTVLRASDPDVGANGQLQYRILDGDPAGAFVLDPASGEFGTMRPLDREVEPAFQLRI 1822
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 62/146 (42%), Gaps = 26/146 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY--------------RLLDNNTDAASY 63
FY A + + G +QV ATD DSG FGL+ Y R+ + D +
Sbjct: 579 FYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGASGSPPFRIDARSGDVCTI 638
Query: 64 FNLDPATEHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEG 114
LD QGP D GGL S V + V+D ND P F Y S+ +
Sbjct: 639 RTLD---RDQGPSTFDFTVTAVDGGGLKSMVYVKVFVSDENDNPPHFYPREYAVSLSAQS 695
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV 140
G AV RV A D D+G + + Y +
Sbjct: 696 TPGTAVMRVRAHDPDQGPHGRLSYHI 721
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 28/162 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQ 73
+G L+ V+A+D D G GLV + L ++ D F LD ++ HQ
Sbjct: 2614 VGAELLHVEASDADPGPHGLVRFTL--SSGDPMGLFELDESSGTLRLAHPLDCETQARHQ 2671
Query: 74 GPIQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
+Q G + A V + V D+ND P F S+ E Q G V +HA D D
Sbjct: 2672 LVVQATDPAGAHFALAPVTVEVQDVNDHGPAFPLNLLSTSLAENQPAGTLVTTLHAIDGD 2731
Query: 130 EGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYE 164
G ++YS+ E P F ++++TG++R DYE
Sbjct: 2732 AGAFGKLHYSLLEAGPGPDGREAFALNSSTGELRARMPFDYE 2773
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 66/158 (41%), Gaps = 30/158 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPI--- 76
G L+Q++A D DSG G V Y L A F L+P++ Q P
Sbjct: 1868 GTLLLQLQAHDPDSGANGRVTYYL---GAGTAGVFLLEPSSGELRTVTTLDREQCPSYAF 1924
Query: 77 -------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-----GQDGLAVGRVH 124
G LS+T V I V D+ND P F + P +P LA+ +
Sbjct: 1925 SVTAVDGAAAGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGPSLSTPTLALATLR 1984
Query: 125 ATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKA 160
A D D G NA + Y + P VD+ TG+IR ++
Sbjct: 1985 AEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARS 2022
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 74/167 (44%), Gaps = 32/167 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQ----- 73
G ++QV+A D G V Y L + A+S F L+P + E Q
Sbjct: 1013 GTQVLQVQAQAPDGGP---VTYHLAGDG--ASSPFGLEPQSGWLWVRAALDREAQELYTL 1067
Query: 74 ------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
G + G + TATV + + + ND +P P +V E Q G +VGR+ AT
Sbjct: 1068 KVIAVSGSKAELGQQTGTATVKVSILNQNDHSPRLSEEPTFLAVAENQPPGTSVGRILAT 1127
Query: 127 DADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
D D G N + YS+ + F + TG++ T + LD E+Q Y
Sbjct: 1128 DRDLGPNGRLTYSLRQLSEDSKAFRIQPQTGEVTTLQTLDREQQSSY 1174
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A +++ + DIND P F Y V E G V +V A+DAD G N V Y +
Sbjct: 236 ALLDVTLLDINDHAPAFNQSRYHAVVSESLAPGSPVLQVFASDADAGANGAVTYEINRRQ 295
Query: 143 ---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D PF +DA+TG +R + LD+E+++++
Sbjct: 296 SEGDGPFSIDAHTGLLRLERPLDFEQRRVH 325
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 74/165 (44%), Gaps = 26/165 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGPI--- 76
G +M+V+A D D G G + Y +L N+ F LD P T +
Sbjct: 698 GTAVMRVRAHDPDQGPHGRLSYHILAGNS--PQLFALDEQTGLLTVAWPLTRRANSVVQL 755
Query: 77 ----QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
QD GGL + +A VNI + P F+ L Y FSVPE G +VG + A +
Sbjct: 756 EVGAQDGGGLQAEPSARVNISIVPGTPTPPIFEQLQYVFSVPEDVAPGTSVGIIQAHNP- 814
Query: 130 EGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
G+ V ++ P F +DA +G ++T++ LD E LE
Sbjct: 815 PGRLGPVTLALSGGDPRGLFSLDATSGLLQTSRPLDRELLGPVLE 859
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 67/163 (41%), Gaps = 33/163 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------------------- 68
G + V A D D G+ V YRL S+F L P
Sbjct: 1558 GPAALHVVARDPDLGEAARVSYRLAAGGD---SHFRLHPNTGALSVVRPLDREQRAEHVL 1614
Query: 69 ---ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVH 124
A++H P + S+T + I V D+ND+ P F Y + E G ++ +
Sbjct: 1615 TVVASDHGSPPR-----SATQLLTISVADVNDEAPAFPQQEYTVLLRENSPPGTSLLTLR 1669
Query: 125 ATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQ 167
ATD D G N V Y F +D +TG + T +ALD E+Q+
Sbjct: 1670 ATDPDLGANGQVTYGGVSCESFSLDPDTGVLTTLRALDREEQE 1712
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 72/178 (40%), Gaps = 40/178 (22%)
Query: 30 GVTLMQVKATDKDSGK-FGLVEYRLLDNNTDAASYFNLDP----ATEHQGP--------- 75
G TL+ ++ATD D + V+Y ++ N F L+P A E GP
Sbjct: 2495 GSTLLTLEATDADGSRTHAAVDYSIISGNR--GQVFQLEPRLAEAGEGVGPGSRVLGCLV 2552
Query: 76 ------------------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
D G SS V + + D+ND P F Y +VPE
Sbjct: 2553 LLEPLDFESLTQYNLTVAAADRGQPPRSSAVPVTVTILDVNDNPPVFTQASYRVAVPEDT 2612
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
G + V A+DAD G + +V +++ P F +D ++G +R LD E Q +
Sbjct: 2613 PVGAELLHVEASDADPGPHGLVRFTLSSGDPMGLFELDESSGTLRLAHPLDCETQARH 2670
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 28/135 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------------ATEHQGP-- 75
G ++ V ATD+DSG GL+ Y L A F++DP A ++GP
Sbjct: 2389 GSAILSVSATDRDSGANGLISYHL----ASPAEGFSVDPNNGTLFTTVGAVALGYEGPGV 2444
Query: 76 ------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHAT 126
+D G G ++ ATV++++ D ND +P F Y +V E G + + AT
Sbjct: 2445 VDVVLEARDHGAPGRAARATVHVQLQDQNDHSPSFTLPHYRVAVTEDLPPGSTLLTLEAT 2504
Query: 127 DADEGQ-NAVVYYSV 140
DAD + +A V YS+
Sbjct: 2505 DADGSRTHAAVDYSI 2519
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 35/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G ++ ++ ATD+D G G + Y L + D+ + F + P T E Q
Sbjct: 1118 GTSVGRILATDRDLGPNGRLTYSLRQLSEDSKA-FRIQPQTGEVTTLQTLDREQQSSYQL 1176
Query: 76 ---IQDEGG--LSSTATVNIRVTDINDKNPEF--------QSLPYEF--SVPEGQDGLAV 120
+QD G S+T TV+I V D+ND +P F LP + VP G V
Sbjct: 1177 LVQVQDGGSPPRSTTGTVHIAVLDLNDNSPTFLQASGAAGGGLPIQIPDRVPPGT---LV 1233
Query: 121 GRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ A D DEG+N + Y++ P F + ++G++ T +L ++ Y+
Sbjct: 1234 TTLQAKDPDEGENGTILYTLTGPGSELFSLHPHSGELLTAASLIRAERPHYV 1285
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 71/174 (40%), Gaps = 33/174 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGPIQDEGGLS--- 83
G + ++A D DSG V + LL A F +DP T H GP+ GG +
Sbjct: 907 GTPIYTLRALDPDSGVNSRVTFTLLAGGGGA---FTVDPITGHVRLMGPLGSPGGPAHEL 963
Query: 84 -----------STATVNIRVTDINDKN-----PEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
T+ +RV + D+ P F S Y +P G G V +V A
Sbjct: 964 ELEARDGGSPPRTSHFRLRVV-VQDQGTRGLAPRFDSPTYRVDLPWGTTPGTQVLQVQAQ 1022
Query: 127 DADEGQNAVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D G V Y + D PF ++ +G + ALD E Q+LY +V +S
Sbjct: 1023 APDGGP---VTYHLAGDGASSPFGLEPQSGWLWVRAALDREAQELYTLKVIAVS 1073
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 70/180 (38%), Gaps = 39/180 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + L L+QV+A D D G G + Y L + A F +DP
Sbjct: 2173 YVAFLPESRPLEGPLLQVEADDLDQGSGGQISYSLAASQP-ARGLFQVDPATGTITTTAI 2231
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
AT+ P L +AT+ + V D ND P P+E V E
Sbjct: 2232 LDREIWAETRLVLMATDRGSP-----ALVGSATLTVMVIDTNDNRPTIPQ-PWELRVSED 2285
Query: 114 GQDGLAVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + +V D D G V++Y S P+D PF V G I LD+E++ Y
Sbjct: 2286 ALLGSEIAQVTGNDVDSG--PVLWYVLSPSGPQD-PFSVGRYGGRISLMGPLDFEQRDSY 2342
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD-EGQNAVVYYSV----P 141
V +RV D N+ P F P ++PE + G A+ A+DAD G N+ V Y + P
Sbjct: 1419 VQVRVQDENEHAPTFARDPLALALPENPEPGAALYTFRASDADGPGPNSDVRYRLLRQEP 1478
Query: 142 EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
P +DA TG + + LD E L
Sbjct: 1479 AAPPLRLDARTGALSAPRGLDRETTPALL 1507
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 15/93 (16%)
Query: 82 LSSTATVNIRVTDINDKNPEF-------QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
L + A + VTD+ND P F + LP E ++P G V RV A D D+G N
Sbjct: 449 LRAEAAFVLHVTDVNDNAPVFDHQLYRPEPLP-EVALP----GSFVVRVTAQDPDQGTNG 503
Query: 135 VVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
V YS+ F +D +G I T +LDYE
Sbjct: 504 QVTYSLAPGAHTRWFSIDPTSGIITTAASLDYE 536
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 44/98 (44%), Gaps = 11/98 (11%)
Query: 72 HQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE 130
H GP + A + + V D+ND P F Y+ ++ E G A+ V ATD D
Sbjct: 2349 HDGPHEGH------ANLTVLVEDVNDNTPAFSQSLYQVTLLEHTPPGSAILSVSATDRDS 2402
Query: 131 GQNAVVYYSVPEDIP-FVVDANTGDIRTN---KALDYE 164
G N ++ Y + F VD N G + T AL YE
Sbjct: 2403 GANGLISYHLASPAEGFSVDPNNGTLFTTVGAVALGYE 2440
>gi|392338882|ref|XP_002726011.2| PREDICTED: protocadherin-23-like [Rattus norvegicus]
gi|392345759|ref|XP_002729134.2| PREDICTED: protocadherin-23-like [Rattus norvegicus]
Length = 2730
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 80/167 (47%), Gaps = 31/167 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP-- 75
LGV + ++ A D DSGK G + Y LL + +F ++P T EHQ
Sbjct: 569 LGV-MGRMTAIDADSGKNGQLSYFLLTD----GKFFKMNPNTGELINWSALDREHQAHHH 623
Query: 76 ----IQDEGGLSSTAT--VNIRVTDINDKNPEF-QSLP---YEFSVPEGQD-GLAVGRVH 124
+ D G AT V + +TDIND P F Q LP + F EGQ V +
Sbjct: 624 MTVLVTDHGSPPRNATMLVYVTITDINDNRPFFPQCLPGKEFHFKALEGQPVNTLVTTIF 683
Query: 125 ATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
A D DEG +A + YS+ D P F +DAN G+IRT L ++ + Y
Sbjct: 684 AKDLDEGLSAELTYSISSDYPAHFKIDANNGEIRTTTILSHDYRPSY 730
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 77/171 (45%), Gaps = 24/171 (14%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------ 70
L Y A ++ G + +V+A D DSG + ++ A F ++P T
Sbjct: 1088 LLYKASVKENQSPGAFVTRVEAEDMDSGVNSKCRFEIMPG--PAFGLFEINPDTGEVVTT 1145
Query: 71 -----EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG 117
E QG ++D G LSSTA + + D ND PE +L ++ +PE Q+
Sbjct: 1146 VTFDREAQGIFRLQVLVRDGGVPSLSSTAAIVCTIEDENDHTPELIALHHDIEIPENQEP 1205
Query: 118 LAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEK 165
V V A D D G N V Y + E D F + +G++ T +ALD E+
Sbjct: 1206 EVVYTVLAFDLDAGNNGAVTYHITEGNTDEYFAIHKTSGELSTTRALDREQ 1256
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 84/175 (48%), Gaps = 25/175 (14%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------- 70
R+ E+G + ++ A D D+ K G V Y +L N D F LD ++
Sbjct: 990 REDAEVGSVVHRLSAQDPDAEKNGDVAYSILSGNEDMV--FVLDSSSGLLRTACPLDYEV 1047
Query: 71 --EHQGPI-QDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRV 123
+H I +GG+ SS+ T+ + V D+ND+ P F+ L Y+ SV E Q G V RV
Sbjct: 1048 KAQHVLTIVAQDGGVPTRSSSQTLTVTVLDVNDETPVFKQLLYKASVKENQSPGAFVTRV 1107
Query: 124 HATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
A D D G N+ + + P F ++ +TG++ T D E Q ++ +V +
Sbjct: 1108 EAEDMDSGVNSKCRFEIMPGPAFGLFEINPDTGEVVTTVTFDREAQGIFRLQVLV 1162
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI 76
L Y + R+ E+G ++ + A DKD G G VEY L++ + A F +DP T G +
Sbjct: 1297 LHYQSAVREDAEVGTVVLVLSAVDKDEGLNGQVEYFLMEETSGA---FAIDPVT---GTL 1350
Query: 77 QDEGGL-----------------------SSTATVNIRVTDINDKNPEFQSLPYE-FSVP 112
+ G L S+ T+ I VTD ND +P ++ P + F P
Sbjct: 1351 RTSGALDREARSQYTFQAVARDCSTRGAKSARLTILIAVTDANDNDPVWEENPVDAFIAP 1410
Query: 113 EGQDGLAVGRVHATDADEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLE 171
+ R+ A D D G N V +S E F +D TG+I+ + E ++++
Sbjct: 1411 TPALNQTIVRLRAKDPDAGPNGTVTFSFAERQSVFSIDEYTGEIKLQQNPSSEHFPMWVQ 1470
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 69/159 (43%), Gaps = 30/159 (18%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------------- 82
V A D D+G G V Y + + NTD YF + + G + L
Sbjct: 1211 VLAFDLDAGNNGAVTYHITEGNTD--EYFAIHKTS---GELSTTRALDREQTNNFTLTIL 1265
Query: 83 ---------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQ 132
SS + +RV D ND +P F L Y+ +V E + G V + A D DEG
Sbjct: 1266 CSDLGNPPRSSAVQLRVRVLDDNDHSPAFPMLHYQSAVREDAEVGTVVLVLSAVDKDEGL 1325
Query: 133 NAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
N V Y + E+ F +D TG +RT+ ALD E + Y
Sbjct: 1326 NGQVEYFLMEETSGAFAIDPVTGTLRTSGALDREARSQY 1364
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 74/186 (39%), Gaps = 31/186 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF-------------N 65
Y ++ +G + V A D+D+G + Y ++ N Y +
Sbjct: 2031 YHTHVKESTPVGSHITMVSADDRDTGSHAQIIYGIISGNEKEHFYLEDRTGVLYLVKPLD 2090
Query: 66 LDPATEHQGPIQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VG 121
+ T IQ +E S A V+I V D ND P+F S +PE L+ +
Sbjct: 2091 YEETTAFTLTIQAADEEEKHVSFAAVHISVLDDNDHTPQFLSSTLACVIPENLPVLSTIC 2150
Query: 122 RVHATDADEGQNAVVYYSV-----------PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
VHA D D G V YS+ P FV+D TGDI T + LDYE Y
Sbjct: 2151 SVHALDFDAGPYGEVTYSILSPCLVTHGMHPYQGLFVIDPLTGDIHTEQVLDYESVSEY- 2209
Query: 171 ERVFLI 176
FL+
Sbjct: 2210 --CFLV 2213
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 71/155 (45%), Gaps = 27/155 (17%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLD------NNTDAASYFNLDPAT--------------- 70
T+ V A D D+G +G V Y +L F +DP T
Sbjct: 2148 TICSVHALDFDAGPYGEVTYSILSPCLVTHGMHPYQGLFVIDPLTGDIHTEQVLDYESVS 2207
Query: 71 EHQGPIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
E+ +Q D GG S++ V + V I++ P F Y FS+PE GQ +GRV A+D
Sbjct: 2208 EYCFLVQARDRGGASASLEVWVEVEGIDEFEPIFTQDQYFFSLPEKGQGQQLIGRVEASD 2267
Query: 128 ADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKA 160
AD G + VV YS+ P + F V+ G+I +A
Sbjct: 2268 ADAGVDGVVLYSLRTPSTV-FSVNKTNGNIYLVRA 2301
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---PEDIPF 146
+ + D+ND +P F S P + + + G V R+ A D D +N V YS+ ED+ F
Sbjct: 969 VVILDVNDHSPTFVSYPITYVREDAEVGSVVHRLSAQDPDAEKNGDVAYSILSGNEDMVF 1028
Query: 147 VVDANTGDIRTNKALDYE 164
V+D+++G +RT LDYE
Sbjct: 1029 VLDSSSGLLRTACPLDYE 1046
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 60/132 (45%), Gaps = 13/132 (9%)
Query: 42 DSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPE 101
+SG+ + E RLLD + + + D G + V + + D ND P
Sbjct: 1552 NSGQLIVEEPRLLDFEVRSEVRLIV---------LADNNGHKAFTKVAVSIRDRNDNPPR 1602
Query: 102 FQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRT 157
F Y+ SV EGQ A V +V ATD D G N+ + YS+ + F +D +G I T
Sbjct: 1603 FAQTVYQASVSEGQFYSAHVIQVSATDLDGGLNSQIEYSIVSGNQAGAFRIDELSGVIVT 1662
Query: 158 NKALDYEKQQLY 169
N LDYE Y
Sbjct: 1663 NSILDYESTSSY 1674
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 74/186 (39%), Gaps = 45/186 (24%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP-------------- 75
G ++ V A+D+DSG +G V Y L+ D +S F +D T P
Sbjct: 132 GTEIINVLASDRDSGIYGTVAYELIPG--DQSSLFTIDSTTGMWSPEIWMSPSLYEFLFK 189
Query: 76 ----------------------IQDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSV 111
+D GGL++ A V I VT EF+ Y FSV
Sbjct: 190 GIIYLTSTLSHLEATTLFLMVCARDGGGLTAANNADVTIHVTQTTLAPAEFERPKYTFSV 249
Query: 112 PEG--QDGLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQ 167
E +D L VG V A ++ A+ Y D+ F + G IRT K LD+E Q
Sbjct: 250 YEDVPEDTL-VGTVKARESLNSSEAITYRISSGDLEGKFSIHRWLGTIRTLKPLDHEAQP 308
Query: 168 LYLERV 173
+ + V
Sbjct: 309 MVVLTV 314
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 66/159 (41%), Gaps = 41/159 (25%)
Query: 35 QVKATDKDSGKFGLVEYRLLD--NNTDAASYFNLDPATEHQGPIQD-------------- 78
+VKA+D D+G +GLV+Y L D + +A F +DP QD
Sbjct: 14 KVKASDADAGLYGLVQYSLYDGFQSYEAPPAFQIDPQDGRICVSQDIDRERDPGTFDLLV 73
Query: 79 -------------------EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD--G 117
+GGLS+ A V + V D+ND P F Y S+ GQ G
Sbjct: 74 KAKDGCPQKPNCNHCWLISQGGLSAQAFVRVEVEDVNDNYPVFNPSTYVTSI-SGQTPPG 132
Query: 118 LAVGRVHATDADEGQNAVVYYS-VPEDIP--FVVDANTG 153
+ V A+D D G V Y +P D F +D+ TG
Sbjct: 133 TEIINVLASDRDSGIYGTVAYELIPGDQSSLFTIDSTTG 171
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 12/142 (8%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIR 91
+L+ ++ + SG LV LD +AS+ + A++H P L+ST+ V I+
Sbjct: 1964 SLLGSESPHQKSG--ALVLLHALDREA-SASHRLVILASDHGCP-----PLTSTSVVVIK 2015
Query: 92 VTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFV 147
V DIND P F S Y V E G + V A D D G +A + Y + E F
Sbjct: 2016 VLDINDNAPTFSSRQYHTHVKESTPVGSHITMVSADDRDTGSHAQIIYGIISGNEKEHFY 2075
Query: 148 VDANTGDIRTNKALDYEKQQLY 169
++ TG + K LDYE+ +
Sbjct: 2076 LEDRTGVLYLVKPLDYEETTAF 2097
Score = 42.4 bits (98), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 71/160 (44%), Gaps = 27/160 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAA-------------SYFNLDPATEHQGPIQ-- 77
++QV ATD D G +EY ++ N A S + + + + +Q
Sbjct: 1622 VIQVSATDLDGGLNSQIEYSIVSGNQAGAFRIDELSGVIVTNSILDYESTSSYSLIVQAT 1681
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYE-FSVPEGQ-DGLAVGRVHATDADEGQN 133
D G LS TA V I+V D+ND P F LP E + E G+ V RV DAD N
Sbjct: 1682 DRGVPRLSDTAMVKIQVIDVNDNAPVF--LPSEAVEIAENSLPGIIVSRVSIHDAD--LN 1737
Query: 134 AVVYYSVPED----IPFVVDANTGDIRTNKALDYEKQQLY 169
+S+ ++ F + +TG + + LD+E+ Y
Sbjct: 1738 PAFTFSLVKESNSGAKFAISQDTGVVVLVETLDFEEVTEY 1777
Score = 39.3 bits (90), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNAVVYYSVPE 142
S+ VNI V D+ND PEF + E + G A+ A D D G N +V YS+
Sbjct: 325 SSTEVNITVMDVNDNRPEFPTASDEIRISLTTAPGTALYLARAVDRDSGLNGLVRYSIAN 384
Query: 143 DIP--FVVDANTGDIRTNKAL 161
P F +D G + ++L
Sbjct: 385 SQPSEFSMDQGRGVLYLRESL 405
>gi|405957380|gb|EKC23595.1| Protocadherin-9 [Crassostrea gigas]
Length = 1154
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 27/168 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD---------AASYFNLDPA 69
Y ++ + +G +L++V A+DKD GK + YRL + + ++ F LD
Sbjct: 572 YVVQTQEDNNIGASLIRVSASDKDIGKNAEITYRLQSSKYNFLIDPRSGLISAQFRLD-- 629
Query: 70 TEHQGPIQDEGGL---------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-A 119
+ P+ G L + T +V I++TDIND PEFQ+ +EF++ E +
Sbjct: 630 -REETPLITLGVLAVDGGSPARTGTTSVIIKITDINDNKPEFQNQSFEFAIQENAPKYSS 688
Query: 120 VGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYE 164
VG + ATD DE + + + +P+ IPF + N G IRT + LD E
Sbjct: 689 VGLLVATDKDENE-KITFSLLPQYNGGIPFEILPN-GTIRTTEVLDRE 734
Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
++ G + I++ DIND +P F SV EG G + A D D G +V
Sbjct: 216 RNSGSFYQKLELKIKILDINDNSPTFPEDSARLSVSEGSLVGTSFPIEGAVDRDGGHFSV 275
Query: 136 -VYYSVPEDIPFVVD-------ANTGDIRTNKALDYEKQQLY 169
+Y VPE PF V ++ + K LD E+Q+ Y
Sbjct: 276 NLYRVVPETAPFSVQFQKNVDGSSLVRLILKKTLDREQQKSY 317
>gi|115648153|ref|NP_034016.2| cadherin EGF LAG seven-pass G-type receptor 1 precursor [Mus
musculus]
gi|341940538|sp|O35161.3|CELR1_MOUSE RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 1; Flags:
Precursor
Length = 3034
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 85/180 (47%), Gaps = 28/180 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y R+ E+G ++ ++ATD D+ + YRLL+ A F +D
Sbjct: 373 YRERIRENLEVGYEVLTIRATDGDAPSNANMRYRLLEG---AGGVFEIDARSGVVRTRAV 429
Query: 69 -----ATEHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QD 116
A E+Q ++ + G LS++ATV+I V D ND P+F Y VPE
Sbjct: 430 VDREEAAEYQLLVEANDQGRNPGPLSASATVHIVVEDENDNYPQFSEKRYVVQVPEDVAV 489
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
AV RV ATD D+GQNA ++YS+ F + + +G + LD+E + Y R+
Sbjct: 490 NTAVLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLRI 549
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 76/159 (47%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQ-- 73
+G +++ ++A D+D+ ++ Y+L NT + LD E Q
Sbjct: 717 VGSSVLTLRARDRDANS--VITYQLTGGNTRNRFALSSQSGGGLITLALPLDYKQERQYV 774
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G S TA V I VTD N P FQS Y SV E + G ++ + ATD D G
Sbjct: 775 LAVTASDGTRSHTAQVFINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATISATDEDTG 834
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + +P F +D +TG I T LDYE Q Y
Sbjct: 835 ENARITYVLEDPVPQFRIDPDTGTIYTMTELDYEDQAAY 873
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 31/166 (18%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ-------------- 77
+++QV ATD+DSG G + Y + ++ ++P + G I+
Sbjct: 925 SVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFY-IEPTS---GVIRTQRRLDRENVAVYN 980
Query: 78 ------DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
D G LS++ + + V DIND P F+ E V E G V R+ A D
Sbjct: 981 LWALAVDRGSPNPLSASVGIQVSVLDINDNPPVFEKDELELFVEENSPVGSVVARIRAND 1040
Query: 128 ADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
DEG NA + Y + E ++P F +D +GD+R LD+E ++ Y+
Sbjct: 1041 PDEGPNAQIMYQIVEGNVPEVFQLDLLSGDLRALVELDFEVRRDYM 1086
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 78/176 (44%), Gaps = 39/176 (22%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQGPIQDE 79
+++V+ATD+D G+ + Y ++ N Y + + E+ I+ +
Sbjct: 493 VLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLRIKAQ 552
Query: 80 GG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
G ++S+ V+++V D+ND P F S P++ +V E G +V + A DAD G+N
Sbjct: 553 DGGRPPLINSSGLVSVQVLDVNDNAPIFVSSPFQAAVLENVPLGHSVLHIQAVDADAGEN 612
Query: 134 AVVYYSVPE--------------------DIPFVVDANTGDIRTNKALDYEKQQLY 169
A + Y + + D PF + ++G I LD E+ + Y
Sbjct: 613 ARLQYRLVDTASTIVGGSSVDSENPASAPDFPFQIHNSSGWITVCAELDREEVEHY 668
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 74/178 (41%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y + +G ++ + ATD+D+G+ + Y L D F +DP T
Sbjct: 806 SSHYTVSVSEDRPVGTSIATISATDEDTGENARITYVL----EDPVPQFRIDPDTGTIYT 861
Query: 71 ------EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E Q QD G S T ++ I + D ND P F Y+ SV E
Sbjct: 862 MTELDYEDQAAYTLAITAQDNGIPQKSDTTSLEILILDANDNAPRFLRDFYQGSVFEDAP 921
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V +V ATD D G N + Y+ D F ++ +G IRT + LD E +Y
Sbjct: 922 PSTSVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRENVAVY 979
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 37/170 (21%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPAT---------------- 70
G +++++A D D G G + Y+ L D ++ YF +D AT
Sbjct: 276 GTAVIELRAHDPDEGDAGRLSYQMEALFDERSNG--YFLIDAATGAVTTARSLDRETKDT 333
Query: 71 --------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
+H P + S+ + + V+D ND +P F+ Y + E + G V
Sbjct: 334 HVLKVSAVDHGSPRR-----SAATYLTVTVSDTNDHSPVFEQSEYRERIRENLEVGYEVL 388
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+ ATD D NA + Y + E F +DA +G +RT +D E+ Y
Sbjct: 389 TIRATDGDAPSNANMRYRLLEGAGGVFEIDARSGVVRTRAVVDREEAAEY 438
Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 42/182 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD---PATEHQGPIQ-------- 77
LG +++ ++A D D+G+ ++YRL+D + ++D PA+ P Q
Sbjct: 595 LGHSVLHIQAVDADAGENARLQYRLVDTASTIVGGSSVDSENPASAPDFPFQIHNSSGWI 654
Query: 78 ---------------------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
D G +SS+A+V+I V D+ND +P F YE + E
Sbjct: 655 TVCAELDREEVEHYSFGVEAVDHGSPAMSSSASVSITVLDVNDNDPMFTQPVYELRLNED 714
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQL 168
G +V + A D D N+V+ Y + + G I LDY++++
Sbjct: 715 AAVGSSVLTLRARDRD--ANSVITYQLTGGNTRNRFALSSQSGGGLITLALPLDYKQERQ 772
Query: 169 YL 170
Y+
Sbjct: 773 YV 774
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 99 NPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP------EDIPFVVDAN 151
+P+F Y+ SVPE + G AV + A D DEG + Y + + F++DA
Sbjct: 257 SPQFPLPSYQVSVPENEPAGTAVIELRAHDPDEGDAGRLSYQMEALFDERSNGYFLIDAA 316
Query: 152 TGDIRTNKALDYEKQQLYLERV 173
TG + T ++LD E + ++ +V
Sbjct: 317 TGAVTTARSLDRETKDTHVLKV 338
>gi|94369682|ref|XP_143371.6| PREDICTED: similar to cadherin protein [Mus musculus]
Length = 2842
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 83/174 (47%), Gaps = 21/174 (12%)
Query: 23 ARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLDPA 69
R+ E+G + ++ A D D+ G V Y +L N D A + +
Sbjct: 1102 VREDAEVGAVVHRITAQDPDAEMNGEVAYSILSGNEDMVFVLDSSSGLLRIACPLDYEVK 1161
Query: 70 TEH-QGPIQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVH 124
T+H + +GG+ SS+ T+ I V D+ND+ P F+ L YE SV E Q G+ V RV
Sbjct: 1162 TQHILTLVAHDGGMPARSSSQTLTITVLDVNDETPAFKQLLYETSVKENQSPGVFVTRVE 1221
Query: 125 ATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
A D D G N+ + + P F ++ +TG++ T D E Q ++ RV +
Sbjct: 1222 AEDTDSGVNSKHQFEIMPGPAFGLFEINPDTGEVVTAVTFDREAQGIFRLRVLV 1275
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 82/190 (43%), Gaps = 34/190 (17%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------ 70
L Y ++ GV + +V+A D DSG ++ ++ A F ++P T
Sbjct: 1201 LLYETSVKENQSPGVFVTRVEAEDTDSGVNSKHQFEIMPG--PAFGLFEINPDTGEVVTA 1258
Query: 71 -----EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG 117
E QG ++D G LSSTA + + D ND PEF L ++ + E +D
Sbjct: 1259 VTFDREAQGIFRLRVLVRDGGVPSLSSTADIICTIEDENDHAPEFIVLHHDIEILENRDP 1318
Query: 118 LAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
V V A D D G N V Y + E D F + +G++ T +ALD E
Sbjct: 1319 EVVYTVLAFDMDAGNNGAVTYHIAEGNTDEYFAIHTTSGELSTTRALDRE---------- 1368
Query: 175 LISKFATSYL 184
LIS F + L
Sbjct: 1369 LISNFTLTIL 1378
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 58/114 (50%), Gaps = 15/114 (13%)
Query: 71 EHQGPIQ------DEGGLSSTAT--VNIRVTDINDKNPEF-QSLP---YEFSVPEGQD-G 117
EHQG Q D G AT V + +TDIND P F Q LP + F V EGQ
Sbjct: 730 EHQGHHQITVLVTDHGSPPRNATMLVYVTITDINDNWPFFPQCLPGKEFHFKVLEGQPVN 789
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
V V A D DEG +A + YS+ D P F +DAN G+IRT L ++ + Y
Sbjct: 790 TLVTTVFAKDLDEGLSAELTYSISSDYPAHFKIDANNGEIRTTSILSHDYRPSY 843
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 19/174 (10%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA----------ASYFNL 66
L Y + R+ E+G ++ + A D+D G G VEY L++ + A + L
Sbjct: 1410 LHYQSSIREDAEVGTVVLVLSAVDRDEGLNGQVEYFLMEEVSGAFTIDRVTGILRTSHAL 1469
Query: 67 DPATEHQGPIQ-------DEGGLSSTATVNIRVTDINDKNPEFQSLPYE-FSVPEGQDGL 118
D + Q Q +G SS ++ I VTD ND +P ++ P + F P
Sbjct: 1470 DRESRSQHTFQAVARDCSTQGAKSSVLSILISVTDANDNDPVWEENPVDAFISPMLALNQ 1529
Query: 119 AVGRVHATDADEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLE 171
V + A+D D G N V +S + F +D TG+++ + L E ++L+
Sbjct: 1530 TVVHLRASDPDAGPNGTVTFSFADRQSVFSIDGYTGEVKLQQNLSSEHFPIWLQ 1583
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 70/156 (44%), Gaps = 30/156 (19%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------------- 82
V A D D+G G V Y + + NTD YF + + G + L
Sbjct: 1324 VLAFDMDAGNNGAVTYHIAEGNTD--EYFAIHTTS---GELSTTRALDRELISNFTLTIL 1378
Query: 83 ---------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQ 132
SS +++RV D ND +P F L Y+ S+ E + G V + A D DEG
Sbjct: 1379 CSDLGNPPRSSAMQLHVRVLDDNDHSPAFPMLHYQSSIREDAEVGTVVLVLSAVDRDEGL 1438
Query: 133 NAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQ 166
N V Y + E++ F +D TG +RT+ ALD E +
Sbjct: 1439 NGQVEYFLMEEVSGAFTIDRVTGILRTSHALDRESR 1474
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---P 141
T + + D+ND +P F S P + + + G V R+ A D D N V YS+
Sbjct: 1077 TLVAEVVILDVNDHSPTFVSYPITYVREDAEVGAVVHRITAQDPDAEMNGEVAYSILSGN 1136
Query: 142 EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
ED+ FV+D+++G +R LDYE + ++
Sbjct: 1137 EDMVFVLDSSSGLLRIACPLDYEVKTQHI 1165
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 71/185 (38%), Gaps = 28/185 (15%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF-------- 64
T S Y A ++ +G + V A D D G + Y ++ N Y
Sbjct: 2138 TFSSRHYQAHVKESTPVGSHITMVSADDPDKGSHAEIIYGIISGNEKEHFYLEDRTGVLY 2197
Query: 65 -----NLDPATEHQGPIQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ + IQ +E S A V+I V D ND +P+F S PE
Sbjct: 2198 LVKPLDYEETVAFTLTIQATDEEEKHVSFAAVHISVLDDNDHSPQFLSSTLACITPENLP 2257
Query: 117 GLAV-GRVHATDADEGQNAVVYYSV-----------PEDIPFVVDANTGDIRTNKALDYE 164
L++ VHA D D G V YS+ P F +D TGDI T + LDYE
Sbjct: 2258 PLSIICSVHALDFDTGPYGEVTYSIVSPCLVTHGMHPYQDLFAIDPLTGDIHTEQMLDYE 2317
Query: 165 KQQLY 169
+ Y
Sbjct: 2318 SVREY 2322
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 76 IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNA 134
+ + G + V + + D ND P F Y+ SV EGQ + V +V ATD D+G N+
Sbjct: 1690 LAESNGHQAFTQVTVAIQDWNDNPPRFAQSVYQASVSEGQFYSVHVIQVSATDLDQGLNS 1749
Query: 135 VVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ YS+ + F +D G I TN LDYE Y
Sbjct: 1750 QIEYSIVSGNQAGAFRIDELNGVILTNSILDYESSGSY 1787
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 65/156 (41%), Gaps = 38/156 (24%)
Query: 35 QVKATDKDSGKFGLVEYRLLD--NNTDAASYFNLDPATEHQGPIQD-------------- 78
QVKA+D D+G +GLV+Y L D + +A F +DP QD
Sbjct: 6 QVKASDADAGLYGLVKYSLYDGFQSYEAPPAFQIDPQDGRICVSQDIDRERDPGTFDLLV 65
Query: 79 ----------------EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD--GLAV 120
GGLS+ A V + V D+ND P F Y S+ GQ G +
Sbjct: 66 KAKDGESLRSSHHLALLGGLSAQAFVRVEVDDVNDNYPVFTPSTYVTSI-SGQTPPGTEI 124
Query: 121 GRVHATDADEG-QNAVVYYSVPEDIP--FVVDANTG 153
V A+D D G V Y +P D F +D+ TG
Sbjct: 125 INVLASDRDSGIYGTVAYELIPGDQSSLFTIDSTTG 160
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 76/174 (43%), Gaps = 27/174 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA-------------SYFN 65
Y A + V ++QV ATD D G +EY ++ N A S +
Sbjct: 1721 YQASVSEGQFYSVHVIQVSATDLDQGLNSQIEYSIVSGNQAGAFRIDELNGVILTNSILD 1780
Query: 66 LDPATEHQGPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYE-FSVPEGQ-DGLA 119
+ + + +Q D G LS TA V I+VTDIND P F LP E + E G+
Sbjct: 1781 YESSGSYSLIVQATDRGVPRLSGTALVKIQVTDINDNAPVF--LPSEAVEIAENSLPGVI 1838
Query: 120 VGRVHATDADEGQNAVVYYSVPED----IPFVVDANTGDIRTNKALDYEKQQLY 169
V RV DAD N +S+ ++ F + +TG + + LD+E+ Y
Sbjct: 1839 VARVSVHDAD--LNPAFTFSLVKESSSAAKFAISQDTGVVVLAQTLDFEEVTEY 1890
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 59/123 (47%), Gaps = 10/123 (8%)
Query: 47 GLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLP 106
LV LD +AS+ + A++H P LSST+ + I + DIND P F S
Sbjct: 2090 ALVLLHALDREA-SASHKLVILASDHGCP-----PLSSTSVIAIDILDINDNAPTFSSRH 2143
Query: 107 YEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALD 162
Y+ V E G + V A D D+G +A + Y + E F ++ TG + K LD
Sbjct: 2144 YQAHVKESTPVGSHITMVSADDPDKGSHAEIIYGIISGNEKEHFYLEDRTGVLYLVKPLD 2203
Query: 163 YEK 165
YE+
Sbjct: 2204 YEE 2206
Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 73/176 (41%), Gaps = 27/176 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLD------NNTDAASYFNLDPAT---------------E 71
+ V A D D+G +G V Y ++ F +DP T E
Sbjct: 2262 ICSVHALDFDTGPYGEVTYSIVSPCLVTHGMHPYQDLFAIDPLTGDIHTEQMLDYESVRE 2321
Query: 72 HQGPIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDA 128
+ +Q D G S++ V + V I++ P F Y FS+ E GQ +GRV A+DA
Sbjct: 2322 YCLLVQAKDRGDASASLEVWVEVEGIDEFEPIFTQDQYFFSLREKGQGQQLIGRVEASDA 2381
Query: 129 DEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATS 182
D G + V YS+ P + F V+ G+I +A QL E + A S
Sbjct: 2382 DAGVDGEVLYSLRTPSTV-FSVNKTNGNIYWVRAPLLGSSQLVKEDTLEVKIIAHS 2436
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV-- 140
S+ VNI V D+ND PEF + E + + G A+ A D D G N +V YS+
Sbjct: 398 SSTEVNITVMDVNDNRPEFPTASDEIRISQTTPPGTALYLARAQDRDSGLNGLVRYSIAS 457
Query: 141 PEDIPFVVDANTGDIRTNKAL 161
P+ F +D G + ++L
Sbjct: 458 PQPSEFSMDQGRGVLYLRESL 478
>gi|3800736|gb|AAC68836.1| seven-pass transmembrane receptor precursor [Mus musculus]
Length = 3034
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 85/180 (47%), Gaps = 28/180 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y R+ E+G ++ ++ATD D+ + YRLL+ A F +D
Sbjct: 373 YRERIRENLEVGYEVLTIRATDGDAPSNANMRYRLLEG---AGGVFEIDARSGVVRTRAV 429
Query: 69 -----ATEHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QD 116
A E+Q ++ + G LS++ATV+I V D ND P+F Y VPE
Sbjct: 430 VDREEAAEYQLLVEANDQGRNPGPLSASATVHIVVEDENDNYPQFSEKRYVVQVPEDVAV 489
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
AV RV ATD D+GQNA ++YS+ F + + +G + LD+E + Y R+
Sbjct: 490 NTAVLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLRI 549
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 76/159 (47%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQ-- 73
+G +++ ++A D+D+ ++ Y+L NT + LD E Q
Sbjct: 717 VGSSVLTLRARDRDANS--VITYQLTGGNTRNRFALSSQSGGGLITLALPLDYKQERQYV 774
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G S TA V I VTD N P FQS Y SV E + G ++ + ATD D G
Sbjct: 775 LAVTASDGTRSHTAQVFINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATISATDEDTG 834
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + +P F +D +TG I T LDYE Q Y
Sbjct: 835 ENARITYVLEDPVPQFRIDPDTGTIYTMTELDYEDQAAY 873
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 31/180 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
FY + +++QV ATD+DSG G + Y + ++ ++P + G I+
Sbjct: 911 FYQGSVFEDAPPSTSVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFY-IEPTS---GVIR 966
Query: 78 --------------------DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
D G LS++ + + V DIND P F+ E V E
Sbjct: 967 TQRRLDRENVAVYNLWALAVDRGSPNPLSASVGIQVSVLDINDNPPVFEKDELELFVEEN 1026
Query: 115 QD-GLAVGRVHATDADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
G V R+ A D DEG NA + Y + E ++P F +D +GD+R LD+E ++ Y+
Sbjct: 1027 SPVGSVVARIRANDPDEGPNAQIIYQIVEGNVPEVFQLDLLSGDLRALVELDFEVRRDYM 1086
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 78/176 (44%), Gaps = 39/176 (22%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQGPIQDE 79
+++V+ATD+D G+ + Y ++ N Y + + E+ I+ +
Sbjct: 493 VLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLRIKAQ 552
Query: 80 GG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
G ++S+ V+++V D+ND P F S P++ +V E G +V + A DAD G+N
Sbjct: 553 DGGRPPLINSSGLVSVQVLDVNDNAPIFVSSPFQAAVLENVPLGHSVLHIQAVDADAGEN 612
Query: 134 AVVYYSVPE--------------------DIPFVVDANTGDIRTNKALDYEKQQLY 169
A + Y + + D PF + ++G I LD E+ + Y
Sbjct: 613 ARLQYRLVDTASTIVGGSSVDSENPASAPDFPFQIHNSSGWITVCAELDREEVEHY 668
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 74/178 (41%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y + +G ++ + ATD+D+G+ + Y L D F +DP T
Sbjct: 806 SSHYTVSVSEDRPVGTSIATISATDEDTGENARITYVL----EDPVPQFRIDPDTGTIYT 861
Query: 71 ------EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E Q QD G S T ++ I + D ND P F Y+ SV E
Sbjct: 862 MTELDYEDQAAYTLAITAQDNGIPQKSDTTSLEILILDANDNAPRFLRDFYQGSVFEDAP 921
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V +V ATD D G N + Y+ D F ++ +G IRT + LD E +Y
Sbjct: 922 PSTSVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRENVAVY 979
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 37/170 (21%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPAT---------------- 70
G +++++A D D G G + Y+ L D ++ YF +D AT
Sbjct: 276 GTAVIELRAHDPDEGDAGRLSYQMEALFDERSNG--YFLIDAATGAVTTARSLDRETKDT 333
Query: 71 --------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
+H P + S+ + + V+D ND +P F+ Y + E + G V
Sbjct: 334 HVLKVSAVDHGSPRR-----SAATYLTVTVSDTNDHSPVFEQSEYRERIRENLEVGYEVL 388
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+ ATD D NA + Y + E F +DA +G +RT +D E+ Y
Sbjct: 389 TIRATDGDAPSNANMRYRLLEGAGGVFEIDARSGVVRTRAVVDREEAAEY 438
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 42/182 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD---PATEHQGPIQ-------- 77
LG +++ ++A D D+G+ ++YRL+D + ++D PA+ P Q
Sbjct: 595 LGHSVLHIQAVDADAGENARLQYRLVDTASTIVGGSSVDSENPASAPDFPFQIHNSSGWI 654
Query: 78 ---------------------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
D G +SS+A+V+I V D+ND +P F YE + E
Sbjct: 655 TVCAELDREEVEHYSFGVEAVDHGSPAMSSSASVSITVLDVNDNDPMFTQPVYELRLNED 714
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQL 168
G +V + A D D N+V+ Y + + G I LDY++++
Sbjct: 715 AAVGSSVLTLRARDRD--ANSVITYQLTGGNTRNRFALSSQSGGGLITLALPLDYKQERQ 772
Query: 169 YL 170
Y+
Sbjct: 773 YV 774
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 99 NPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP------EDIPFVVDAN 151
+P+F Y+ SVPE + G AV + A D DEG + Y + + F++DA
Sbjct: 257 SPQFPLPSYQVSVPENEPAGTAVIELRAHDPDEGDAGRLSYQMEALFDERSNGYFLIDAA 316
Query: 152 TGDIRTNKALDYEKQQLYLERV 173
TG + T ++LD E + ++ +V
Sbjct: 317 TGAVTTARSLDRETKDTHVLKV 338
>gi|296485256|tpg|DAA27371.1| TPA: protocadherin alpha 6 [Bos taurus]
Length = 812
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 70/147 (47%), Gaps = 13/147 (8%)
Query: 34 MQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVT 93
+ VK DS + GLV + LD + + L AT+ P L+ T + I V
Sbjct: 180 LDVKTNSDDSTQIGLVLRKSLDRE-EVPEHNLLLMATDQGKP-----ELTGTVQLLITVL 233
Query: 94 DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------F 146
D+ND P F YE + E D G V RV+A+D DEG N + YS +P F
Sbjct: 234 DVNDNAPSFGQSEYEVKIFENSDNGTIVIRVNASDRDEGANGEISYSFNNLVPATVSNQF 293
Query: 147 VVDANTGDIRTNKALDYEKQQLYLERV 173
+DANTG+I LD+E LY R+
Sbjct: 294 RIDANTGEIVIQGNLDFENMNLYKIRI 320
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 76/176 (43%), Gaps = 36/176 (20%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRL-------------------LDNNTD---AA 61
R+ +LG + + +D DSG G V L LD+ D A
Sbjct: 360 REDAQLGTVIALISVSDLDSGPNGQVTCSLTPYVPFKLVSTFKNYYSLVLDSILDREKVA 419
Query: 62 SYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAV 120
+Y + A + P LS+TA++++ V D+ND P F Y V E G +
Sbjct: 420 NYEVVVTARDRGSP-----SLSATASMSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHI 474
Query: 121 GRVHATDADEGQNAVVYYSVPED-------IPFV-VDANTGDIRTNKALDYEKQQL 168
V A DAD +NA+V YS+ E +V V A +G + + LD+E+ +L
Sbjct: 475 FTVSARDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYALQPLDHEELEL 530
Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 68/182 (37%), Gaps = 41/182 (22%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------------NTDAASYFN 65
Y ++ + G + V A D D+ + LV Y L++ + ++ +
Sbjct: 460 YTVFVKENNPPGCHIFTVSARDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYA 519
Query: 66 LDPA-------TEHQGPIQDEG--GLSSTATVNIRVTDIND-----------KNPEFQSL 105
L P + Q D G L S T+ + V D ND + P S
Sbjct: 520 LQPLDHEELELLQFQVSACDAGVPPLGSNVTLQVFVLDENDNAPALLPPGSGRGPSAVSQ 579
Query: 106 PYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKA 160
SV G V +V A D+D G NA + Y + PF V TG+I T +A
Sbjct: 580 VVSRSVGAGH---VVAKVRAVDSDSGYNAWLSYELQPAAGGASSPFRVGLYTGEISTTRA 636
Query: 161 LD 162
LD
Sbjct: 637 LD 638
Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 53/140 (37%), Gaps = 25/140 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G +++V A+D+D G G + Y NN A+ N + G I +G L
Sbjct: 258 GTIVIRVNASDRDEGANGEISYSF--NNLVPATVSNQFRIDANTGEIVIQGNLDFENMNL 315
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHAT 126
+ TV ++V D ND P+ V E Q G + + +
Sbjct: 316 YKIRIEATDKGHPPMAGHCTVLVKVLDKNDNVPQIALTSLSLPVREDAQLGTVIALISVS 375
Query: 127 DADEGQNAVVYYSVPEDIPF 146
D D G N V S+ +PF
Sbjct: 376 DLDSGPNGQVTCSLTPYVPF 395
>gi|449274104|gb|EMC83387.1| Cadherin-22 [Columba livia]
Length = 792
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 87/184 (47%), Gaps = 37/184 (20%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------------------- 68
+G ++MQV A+D D +G R++ + + +F +D
Sbjct: 162 VGTSVMQVMASDADDPTYG-SSARVVYSVLEGEQHFTVDSKTGVIRTAVADLDRETQDRY 220
Query: 69 -----ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR 122
AT+ G + GGLS + TV I +TD+ND P F Y+FS+ E G A+GR
Sbjct: 221 EVVIRATDMAGQL---GGLSGSTTVTIVITDVNDNPPRFPQKMYQFSIVETAPVGTAIGR 277
Query: 123 VHATDADEGQNAVVYYSVPED-----IPFVVDANTGD--IRTNKALDYEKQQLYLERVFL 175
V A D+D G+N + Y V ++ D+NT + I K LDYE ++++ V
Sbjct: 278 VKAEDSDVGENTDMTYQVKDEEGVEMFRVTTDSNTQEAIITVQKPLDYESKRVHTVVVEA 337
Query: 176 ISKF 179
++KF
Sbjct: 338 LNKF 341
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPE-DI 144
I+V DIND P F PY SV E G +V +V A+DAD+ G +A V YSV E +
Sbjct: 135 IKVQDINDSEPRFLEGPYIGSVAELSPVGTSVMQVMASDADDPTYGSSARVVYSVLEGEQ 194
Query: 145 PFVVDANTGDIRTNKA-LDYEKQQLY 169
F VD+ TG IRT A LD E Q Y
Sbjct: 195 HFTVDSKTGVIRTAVADLDRETQDRY 220
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D G V + V D+ D+ PEF+ + V E G VG V A D D + V
Sbjct: 348 DLGTFRDQTIVRVSVLDV-DEPPEFRPTSHLMEVQEDAHVGSVVGVVTALDPDMANHPVR 406
Query: 137 Y---YSVPEDIPFVVDANTGDIRTNKALDYE 164
Y S + F +DANTG I T K LD E
Sbjct: 407 YAIDRSTDTERIFDIDANTGAIVTGKVLDRE 437
Score = 36.6 bits (83), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 15/145 (10%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKN 99
D D+ +V ++LD T A + N+ D S A++ IR+ D+ND
Sbjct: 420 DIDANTGAIVTGKVLDRET--AGWHNITVLAMEA----DNHSQVSRASLRIRILDVNDNP 473
Query: 100 PEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYY--SVPEDIPFV----VDANT 152
PE + PYE +V E + G + + D DE Q+ +Y PE V NT
Sbjct: 474 PELAT-PYEAAVCEDAKPGQLIQTISVVDRDEPQSGHRFYFTLAPEANSHFSLLDVQDNT 532
Query: 153 GDIRTNK-ALDYEKQQLYLERVFLI 176
+ T + + ++Q +YL + ++
Sbjct: 533 AAVHTQRMGFNRQEQDVYLLPILVV 557
>gi|301620403|ref|XP_002939565.1| PREDICTED: cadherin-23-like [Xenopus (Silurana) tropicalis]
Length = 2570
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 81/163 (49%), Gaps = 36/163 (22%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI----------Q 77
+LG T++Q+KATD DSG+F L++Y L+ D F ++P T G I +
Sbjct: 1892 QLGATVLQIKATDADSGRFALIQYSLV----DGEGKFGINPTT---GDIYILSTLDREKK 1944
Query: 78 DEGGLSSTATVN----------------IRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAV 120
D L++ A N I V D+ND P+F + SV E + +G +V
Sbjct: 1945 DHYTLTAIARDNPGDIASNRRENSVQVLITVLDVNDCRPQFSKSQFSTSVYENEPEGTSV 2004
Query: 121 GRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKAL 161
+ ATD DEG N VV Y++ P F++D ++G I + + L
Sbjct: 2005 ITMSATDLDEGDNGVVTYNLEGPGSEAFLIDKDSGLITSRRLL 2047
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVP 141
+S+ATV++ + D+ND +P FQ+LP+ + EG G +V +V A D DEG N V Y +P
Sbjct: 390 TSSATVSVNLLDLNDNDPTFQNLPFIAEILEGTATGASVFQVVAIDLDEGLNGQVTYRMP 449
Query: 142 EDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
IP FV+++ TG I + LD EK Y RV
Sbjct: 450 VGIPQMDFVINSTTGLITSTAVLDREKIAAYYLRV 484
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 74/160 (46%), Gaps = 27/160 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD------------PATEHQG--- 74
G ++++V ATDKD G ++ Y + N D F +D P E Q
Sbjct: 1020 GTSVIRVNATDKDKGLNSVLSYYITQGNEDLT--FRMDRLTGEIATRPAPPDREKQSFYK 1077
Query: 75 ---PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATD 127
++DEG LS+T TV + + D ND +P F+S YE + EG L + A D
Sbjct: 1078 LVVTVEDEGNPALSATTTVYVTILDENDNSPVFKSPVYEVTRDEGPLSLNSVILTTTAVD 1137
Query: 128 ADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYE 164
DEG N V YS+ F ++ TG IR K LDYE
Sbjct: 1138 QDEGPNGTVTYSISAGNVQETFSINNATGLIRVVKELDYE 1177
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 31/160 (19%)
Query: 37 KATDKDSGKFGLVEYRLLDNN-----------------------TDAASYFNLDPATEHQ 73
KA DKDSG G VEY ++ + + +++N+ + +
Sbjct: 1243 KADDKDSGLNGQVEYSIVGGDLLGDFVISSVEGDLRVRKDYELDRENIAFYNITIMAKDR 1302
Query: 74 GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
G SSTA V IRV DIND +P +LP S+ E + R+ A+DAD G+
Sbjct: 1303 G----NPPFSSTAVVEIRVLDINDNDPILLNLPQNISISENTPVSTPITRILASDADTGR 1358
Query: 133 NAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
NA++ +++ + F ++ NTG + N+ LD EK Y
Sbjct: 1359 NALLTFNITAGNLENAFSINENTGIVYVNRQLDREKISEY 1398
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 77/173 (44%), Gaps = 22/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG--PI 76
Y A + +++Q++ATD D G GLV YR+L N +++ +G P+
Sbjct: 575 YEASVPENVPFSSSIVQLEATDADEGDNGLVWYRILSGNEKTNFRIDVNTGLIMRGVQPL 634
Query: 77 ----------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPY-EFSVPEGQD-GL 118
D+G + S+ V I V D+ND+ P F Y + E G
Sbjct: 635 DRETNSSHVLVVEAYNSDQGPMRSSVRVIIYVEDVNDEVPVFTQQQYSRLGLRETVGIGT 694
Query: 119 AVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
+V V ATD D G +V Y + D F +DA+TG + T LDYE + Y
Sbjct: 695 SVTVVRATDRDTGDGGLVTYKIISGADGKFDIDASTGLLTTIDYLDYETKTTY 747
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
+ TATV++ V DIND P F YE SVPE ++ ++ ATDADEG N +V+Y +
Sbjct: 551 TGTATVSVTVLDINDNKPIFLKSSYEASVPENVPFSSSIVQLEATDADEGDNGLVWYRIL 610
Query: 141 --PEDIPFVVDANTGDI-RTNKALDYE 164
E F +D NTG I R + LD E
Sbjct: 611 SGNEKTNFRIDVNTGLIMRGVQPLDRE 637
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 81/187 (43%), Gaps = 33/187 (17%)
Query: 22 MARDKHELGV--TLMQVKATDKDSGKFGLVEYRL-----------------------LDN 56
+ RD+ L + ++ A D+D G G V Y + LD
Sbjct: 1117 VTRDEGPLSLNSVILTTTAVDQDEGPNGTVTYSISAGNVQETFSINNATGLIRVVKELDY 1176
Query: 57 NTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYE--FSVPEG 114
Y + AT+ +Q L+STATV + V DIND P F PYE F + EG
Sbjct: 1177 EVCLGRYTLIVTATDRCPIVQRR--LTSTATVLVNVNDINDNWPTFPK-PYEGPFEITEG 1233
Query: 115 QDGLAVGRVHATDADEGQNAVVYYS-VPEDI--PFVVDANTGDIRTNKALDYEKQQLYLE 171
Q G V A D D G N V YS V D+ FV+ + GD+R K + +++ +
Sbjct: 1234 QPGPRVATFKADDKDSGLNGQVEYSIVGGDLLGDFVISSVEGDLRVRKDYELDRENIAFY 1293
Query: 172 RVFLISK 178
+ +++K
Sbjct: 1294 NITIMAK 1300
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 72/164 (43%), Gaps = 28/164 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G TL+ V A D D G G + Y L +N A Y L+ G I
Sbjct: 1788 GTTLISVSAVDPDKGPNGQITYSL--HNLVPAGYLQLE--DNMAGKIIANRTVDYEQVQW 1843
Query: 77 -------QDEGGLSSTATVNI--RVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHAT 126
D G +A V + ++ DIND NP F Y+ V E Q G V ++ AT
Sbjct: 1844 LNFTVRASDNGSPRRSAEVPVYLQIVDINDNNPIFSQSSYQKPVFEDIQLGATVLQIKAT 1903
Query: 127 DADEGQNAVVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
DAD G+ A++ YS V + F ++ TGDI LD EK+ Y
Sbjct: 1904 DADSGRFALIQYSLVDGEGKFGINPTTGDIYILSTLDREKKDHY 1947
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 70/158 (44%), Gaps = 26/158 (16%)
Query: 36 VKATDKDSGKFGLVEYRLL---------DNNT-----------DAASYFNLDPATEHQGP 75
V A D D G +V YRLL +N+T D S+ N P +
Sbjct: 1461 VLALDNDIGSNAVVSYRLLGAQINLFTINNSTGVVTVRAGKVIDRESFLN--PILDLTLV 1518
Query: 76 IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNA 134
+D G L+STA + + V D ND P F + E G +V +V ATDAD G N
Sbjct: 1519 AEDIGKLNSTARLVLTVLDANDNRPIFSPSSVTVHLRENSPPGFSVVKVTATDADSGINQ 1578
Query: 135 VVYYSVPEDIP--FVVDANTGDIRT-NKALDYEKQQLY 169
+ Y + F++DA TG IR N +D E++ Y
Sbjct: 1579 QLSYRIESGAQDRFLIDAFTGVIRVANVTVDREEKDTY 1616
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 72/168 (42%), Gaps = 30/168 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G + V+A D D G GLV + L N + F + G +
Sbjct: 911 GRRVALVQARDPDDGNNGLVTFSLTAGN--PSGIFEIRTTNNTLGEVFLIKSIDREVQEL 968
Query: 77 -------QDEGG--LSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEG-QDGLAVGRVHA 125
D G S T+ + V D+ND P F + Y SV E G +V RV+A
Sbjct: 969 YTLKVQASDSGSPPRRSEYTLTVNVNDVNDNPPVFDKPFGYNVSVYENVGGGTSVIRVNA 1028
Query: 126 TDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKA-LDYEKQQLY 169
TD D+G N+V+ Y + ED+ F +D TG+I T A D EKQ Y
Sbjct: 1029 TDKDKGLNSVLSYYITQGNEDLTFRMDRLTGEIATRPAPPDREKQSFY 1076
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 84/182 (46%), Gaps = 33/182 (18%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI- 76
+ GA+ R+ VT+++++ATD+DS + Y +L N + SYF + +E G I
Sbjct: 85 YLGAI-RENEPSVVTVVKLRATDEDSAPNNQITYSIL-NASAFQSYFEIS-ISEGYGVIT 141
Query: 77 ---------------------QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
+D G L+ST V+I V D ND P F Y +V E
Sbjct: 142 VTRPLDYEQISNGVISLTVMAKDSGVPSLNSTVPVSIEVFDENDNPPTFSRSSYVITVME 201
Query: 114 G-QDGLAVGRVHATDADE----GQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQL 168
G V ++ATD D GQ +++ YS+ F ++A +G+I T LD E +
Sbjct: 202 NIIAGATVLFLNATDLDRSREYGQESII-YSLDGSPQFRINARSGEITTTTLLDREAKSE 260
Query: 169 YL 170
Y+
Sbjct: 261 YI 262
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 63/148 (42%), Gaps = 20/148 (13%)
Query: 38 ATDKDSGKFGLVEYRL--------LDNNTDAASYFN-LDPATEHQGPI----QDEGGLSS 84
ATD D G FG V Y LD +T + LD T + + +D GG +
Sbjct: 3 ATDNDIGSFGKVSYFFSDDPDRFSLDKDTGVITVITRLDYETTQRYTLTVIARDGGGEET 62
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSVPED 143
T V I V D+ND P FQ Y ++ E + + V ++ ATD D N + YS+
Sbjct: 63 TGRVRINVLDVNDNMPIFQKESYLGAIRENEPSVVTVVKLRATDEDSAPNNQITYSILNA 122
Query: 144 IPF------VVDANTGDIRTNKALDYEK 165
F + G I + LDYE+
Sbjct: 123 SAFQSYFEISISEGYGVITVTRPLDYEQ 150
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 79/187 (42%), Gaps = 39/187 (20%)
Query: 14 SDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL---------LDNNT------ 58
S S F ++ ++ E G +++ + ATD D G G+V Y L +D ++
Sbjct: 1986 SKSQFSTSVYENEPE-GTSVITMSATDLDEGDNGVVTYNLEGPGSEAFLIDKDSGLITSR 2044
Query: 59 ---DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLP------YEF 109
+ FNL +G L T + + V D+ND P F P +
Sbjct: 2045 RLLQSFERFNLTVVATDKG----RPPLWGTTMLKVDVIDVNDNRPVFVRPPNGTILHIKE 2100
Query: 110 SVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALD 162
+P V V+ATD DEG N V Y++ + F +D+ +G I+T LD
Sbjct: 2101 EIPLKS---TVYEVYATDNDEGLNGAVRYNLLKTGAGTKDWEYFTIDSTSGLIQTALRLD 2157
Query: 163 YEKQQLY 169
EKQ +Y
Sbjct: 2158 REKQAMY 2164
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 78/189 (41%), Gaps = 44/189 (23%)
Query: 20 GAMARDKHE--LGVTLMQVKATDKDSGKFGLVEYRLLDNN--TDAASYFNLDPAT----- 70
G + K E L T+ +V ATD D G G V Y LL T YF +D +
Sbjct: 2093 GTILHIKEEIPLKSTVYEVYATDNDEGLNGAVRYNLLKTGAGTKDWEYFTIDSTSGLIQT 2152
Query: 71 ------EHQG-------------PIQDEGGLSSTATVNIRVTDINDKNPEF-----QSLP 106
E Q P+ E L + + + DI+D P F +L
Sbjct: 2153 ALRLDREKQAMYNLIIVAYDLGQPVPYETMLP----LQVALDDIDDNEPAFIRPPRGALQ 2208
Query: 107 YE-FSVPE-GQDGLAVGRVH-ATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKA 160
Y+ SV E + G VG V A D DEG NA+VYY + +D F++ G + K
Sbjct: 2209 YQTLSVREHSKPGTVVGNVSGAVDVDEGSNAIVYYFIATGNQDNNFLLIPE-GKLTVLKN 2267
Query: 161 LDYEKQQLY 169
LD EK+ Y
Sbjct: 2268 LDREKEPYY 2276
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 14/90 (15%)
Query: 74 GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPY-----EFSVPEGQDGLAVGRVHATDA 128
GP Q G ATVNI + DIND P+++ PY E + P+ V V A D
Sbjct: 273 GPNQKIG----IATVNITLLDINDNAPQWKDEPYLINLAEMTPPDSD----VTTVVAIDP 324
Query: 129 DEGQNAVVYYSV-PEDIPFVVDANTGDIRT 157
D +N + YS+ P + + +++ TG IRT
Sbjct: 325 DLAENGTLVYSISPLNKFYTLNSTTGKIRT 354
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 55/124 (44%), Gaps = 18/124 (14%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYR---------LLDNNTDAASYFNLDPATEHQG 74
R+ G ++++V ATD DSG + YR L+D T N+ E +
Sbjct: 1555 RENSPPGFSVVKVTATDADSGINQQLSYRIESGAQDRFLIDAFTGVIRVANVTVDREEKD 1614
Query: 75 PIQ------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHA 125
+ D+G LS + TV+I + D+ND PEF + SV E + G V V A
Sbjct: 1615 TYKLIVVATDQGAVPLSGSITVSILIDDVNDCPPEFVNPIQTVSVLESAEVGTVVAEVTA 1674
Query: 126 TDAD 129
D D
Sbjct: 1675 IDRD 1678
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEF-SVPE-GQDGLAVGRVHATDADEGQNAVVYYSV-- 140
T V+I V D ND +P+F +VPE G V V A D D+G N +V +S+
Sbjct: 877 TLKVSITVLDENDNSPQFDPTSDSVVNVPEDCPTGRRVALVQARDPDDGNNGLVTFSLTA 936
Query: 141 --PEDIPFVVDANT--GDIRTNKALDYEKQQLYLERV 173
P I + N G++ K++D E Q+LY +V
Sbjct: 937 GNPSGIFEIRTTNNTLGEVFLIKSIDREVQELYTLKV 973
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 86 ATVNIRVTDINDKNPEFQSL---PYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
A + + + D+ND P F+ + + EG G + V A D D+G N + YS+
Sbjct: 1753 AKLTVNILDVNDNTPRFRPFGVTAFTERIVEGATPGTTLISVSAVDPDKGPNGQITYSLH 1812
Query: 142 EDIPF----VVDANTGDIRTNKALDYEKQQ 167
+P + D G I N+ +DYE+ Q
Sbjct: 1813 NLVPAGYLQLEDNMAGKIIANRTVDYEQVQ 1842
Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 12/76 (15%)
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVH 124
DPAT+ S+ V + + DIND+ P F Y V + + G + +V
Sbjct: 2298 FDPATD-----------STLQEVRVYLEDINDQPPRFTKPEYTAGVATDAKVGSELIKVL 2346
Query: 125 ATDADEGQNAVVYYSV 140
A DAD G N++V+YS+
Sbjct: 2347 AVDADVGNNSLVFYSI 2362
>gi|47227546|emb|CAG04694.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2413
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 79/161 (49%), Gaps = 24/161 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQ----- 73
G + + A+D DSG G V Y L +++ D F L+P T E Q
Sbjct: 1925 GSIVAAILASDSDSGVNGEVTYSLEEDDEDET--FLLNPVTGVFNVTRVLDYELQRYYIL 1982
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEG 131
QD GG +ST V V D+ND P F++ Y SV E G +V V A+DAD+G
Sbjct: 1983 TARAQDGGGQASTVRVYFNVLDVNDNPPVFETTTYSASVSESLPAGSSVVTVVASDADDG 2042
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
NA ++Y + P F++ + G++RT KALD E Q Y
Sbjct: 2043 PNAQLFYRIASGDPQGHFLITKD-GNLRTQKALDRETQSFY 2082
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 77/173 (44%), Gaps = 35/173 (20%)
Query: 30 GVTLMQVKATDKDS------------GKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
G +MQ+ ATD D G LV Y ++ D+ F +DP +
Sbjct: 1812 GFKIMQLTATDADELPYVSWLLFPSEGPNALVTYTIISGADDS---FRIDPESGDLIATK 1868
Query: 71 ----EHQGPIQ-----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAV 120
E + D+G SS +NI V DIND +P+F Y F +PE G V
Sbjct: 1869 KLDRERRSKYSLLVRADDGKQSSDMRLNITVKDINDHSPKFSRATYSFDIPEDTTAGSIV 1928
Query: 121 GRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ A+D+D G N V YS+ ED F+++ TG + LDYE Q+ Y+
Sbjct: 1929 AAILASDSDSGVNGEVTYSLEEDDEDETFLLNPVTGVFNVTRVLDYELQRYYI 1981
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDIPF 146
VN+ + DIND P F+ Y+ SV E G ++ +V A+D DE NA + Y + E+ PF
Sbjct: 221 VNVTIQDINDNPPSFERDLYQASVLEDAAVGSSILQVTASDGDEAANAEIRYFLDEETPF 280
Query: 147 VVDANTGDIRTNKALDYEKQQLY 169
+D TG I + LDYE ++ Y
Sbjct: 281 QIDPKTGTIIIKEGLDYESRREY 303
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 72/160 (45%), Gaps = 25/160 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH----------------QGPI 76
L++V A+D D K GLV+Y + + N + F +D ++ I
Sbjct: 1205 LLRVSASDVDENKNGLVQYHVAEGNEEGQ--FMIDSSSGQITLVGKLDYETTSSYSLKII 1262
Query: 77 QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQ 132
+GG LSS+ ++I V D ND +P F V E + G V V ATD D G
Sbjct: 1263 AVDGGAEPLSSSCMLSISVLDENDNSPSFPKSSVSVDVLENMRIGELVASVTATDTDSGP 1322
Query: 133 NAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
NA + YS+ F + NTG I K LDYE Q +Y
Sbjct: 1323 NADITYSITATNNHGTFSISPNTGSIFLVKKLDYETQSVY 1362
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 81/180 (45%), Gaps = 26/180 (14%)
Query: 14 SDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS--YFNLDPAT- 70
+ S F+ ++A + G L+ + ATD D G G + + D T AA+ F LDP +
Sbjct: 559 TQSTFHVSLA-EHAPAGTQLLVLSATDGDLGPNGTMRFSF-DAETPAAAQGRFRLDPLSG 616
Query: 71 ----------EHQGP------IQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
E Q + D G L S VN+ + D+ND P F L Y +V
Sbjct: 617 RLSTAVELDREEQASYLLHVQVTDGGSPPLRSAGKVNVTLRDVNDNRPVFYPLQYFANVK 676
Query: 113 EGQ-DGLAVGRVHATDADEGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
E + G V V ATD D G+N V Y + + F ++ NTG I T LD E++ Y
Sbjct: 677 ENEPSGSYVTTVSATDPDLGRNGTVKYMITAGDAATFHINGNTGKISTLVPLDREEKTTY 736
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 74/171 (43%), Gaps = 22/171 (12%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------ 68
D L Y + + + +V+ATDKDSG G + Y + NT F + P
Sbjct: 973 DQLSYEVLIPESEPVNSRFFKVEATDKDSGFNGEIVYDIAGGNT--GDVFGIFPDGQLYI 1030
Query: 69 ATEHQGPIQDEGG------------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
E IQ+ LS++ V++ + D+ND P F S Y F E Q
Sbjct: 1031 KAELDREIQERYNLVLVARDRAVEPLSASVNVSVILDDVNDNRPLFNSTNYVFHFEEEQQ 1090
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
G VGRV A D D G N+ V Y+ P F ++A TG++ + D E
Sbjct: 1091 RGSLVGRVFAEDKDFGPNSEVRYTFEMPQPNFELNAITGELSSTAQFDRES 1141
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 68/155 (43%), Gaps = 18/155 (11%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI---------------- 76
++ V A+D DSG VEY L ++ S +D G +
Sbjct: 2137 VLAVHASDSDSGPNSYVEYSLHGPFSNKFSIGTIDGDVRLVGELDREEISNYTLTVVATD 2196
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+ E LSST V + V D+ND P F Y+ + E G V +V ATDADEG N
Sbjct: 2197 KGEPPLSSTMDVTMVVLDVNDNTPSFSQNIYDIEIEENTLTGTDVIQVFATDADEGTNGQ 2256
Query: 136 VYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ +S+ + F + + TG I + LD E + Y
Sbjct: 2257 IRFSISGSNTDFRIYSVTGMISVARQLDREARSSY 2291
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 13/124 (10%)
Query: 60 AASYFNLDPATEHQG---PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
A+ F+ + QG P++D+ A V + + DIND P+F Y+ SV E
Sbjct: 1147 GAAVFSFVVVSSDQGLPRPLKDQ------AKVQVYIQDINDNQPKFTKDVYQASVSESAP 1200
Query: 117 GLA-VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYLER 172
+ + RV A+D DE +N +V Y V E+ F++D+++G I LDYE Y +
Sbjct: 1201 NVTQLLRVSASDVDENKNGLVQYHVAEGNEEGQFMIDSSSGQITLVGKLDYETTSSYSLK 1260
Query: 173 VFLI 176
+ +
Sbjct: 1261 IIAV 1264
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 74/167 (44%), Gaps = 33/167 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTD--------------------AASYFNLDPA 69
G ++QV ATD D G G + + + +NTD +SY L A
Sbjct: 2238 GTDVIQVFATDADEGTNGQIRFSISGSNTDFRIYSVTGMISVARQLDREARSSYSLLVQA 2297
Query: 70 TEH-QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA--VGRVHAT 126
T+ P D+ ATVNI + D+ND P F+ PY V E + L V +V A
Sbjct: 2298 TDRGSSPRMDQ------ATVNIVLLDVNDCAPVFELSPYTVRVQENLENLPTNVLQVVAR 2351
Query: 127 DADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D D+G N + Y + +D F + + G +R + +D E + Y+
Sbjct: 2352 DDDQGANGQLSYMLSGGNDDGAFSLSSG-GQLRLTQTVDREARGEYI 2397
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 62/155 (40%), Gaps = 35/155 (22%)
Query: 23 ARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL 82
A + G T+ Q KA+D D G G+V Y L N F++ E G I G L
Sbjct: 878 AVENWSTGHTIFQAKASDPDEGANGVVVYSLKQN---PRGLFHIH---EKHGLITLTGPL 931
Query: 83 SSTAT---------------------VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAV 120
TA+ + + V D+ND +P F L YE +PE +
Sbjct: 932 EVTASSYEVEVIAEDMGVPKHTSSLVLIVSVYDVNDNSPVFDQLSYEVLIPESEPVNSRF 991
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDI 155
+V ATD D G N + Y + NTGD+
Sbjct: 992 FKVEATDKDSGFNGEIVYD-------IAGGNTGDV 1019
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 34/173 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTAT-- 87
G + V ATD DSG+ + Y L+ N A +F++ +E+ G + L AT
Sbjct: 469 GSYIKGVSATDGDSGQNANLRYSLVSGN--ALGWFSI---SENSGLVTSAALLDREATSE 523
Query: 88 --------------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHAT 126
+ I +TD+ND+ P F + S+ E G + + AT
Sbjct: 524 VVLNISAKDQGLQPRISYTKLIINITDVNDQVPTFTQSTFHVSLAEHAPAGTQLLVLSAT 583
Query: 127 DADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLERV 173
D D G N + +S + P F +D +G + T LD E+Q YL V
Sbjct: 584 DGDLGPNGTMRFSFDAETPAAAQGRFRLDPLSGRLSTAVELDREEQASYLLHV 636
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 70/169 (41%), Gaps = 26/169 (15%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQ 73
+ +G + V ATD DSG + Y + N F++ P T E Q
Sbjct: 1302 ENMRIGELVASVTATDTDSGPNADITYSITATNNHGT--FSISPNTGSIFLVKKLDYETQ 1359
Query: 74 G------PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVH 124
+D G SS+ V I V D ND P F S+PE +V +
Sbjct: 1360 SVYKLNVSAKDNGRPSRSSSIPVIIHVRDFNDNPPIFTPGDIFKSIPENLPVATSVMMIV 1419
Query: 125 ATDADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
A D D N + YS+ + +P F +DA+TG + TN+ +D E L+
Sbjct: 1420 AHDTDADINGQLEYSIVQQVPRGNHFSIDASTGVLYTNQEVDREFSNLF 1468
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVP 141
SS A++ I V DIND P FQ Y + E G + V ATD D GQNA + YS+
Sbjct: 434 SSFASLVIFVNDINDHPPIFQETEYRVDISEDIPKGSYIKGVSATDGDSGQNANLRYSLV 493
Query: 142 EDIP---FVVDANTGDIRTNKALDYE 164
F + N+G + + LD E
Sbjct: 494 SGNALGWFSISENSGLVTSAALLDRE 519
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 75/196 (38%), Gaps = 31/196 (15%)
Query: 7 PSALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL------------- 53
P E T+ Y A + G +++ V A+D D G + YR+
Sbjct: 2009 PPVFETTT----YSASVSESLPAGSSVVTVVASDADDGPNAQLFYRIASGDPQGHFLITK 2064
Query: 54 ---------LDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQS 104
LD T S++NL P +STA V++ + D+ND P F S
Sbjct: 2065 DGNLRTQKALDRETQ--SFYNLVITVNDLAP-PPMTRFTSTAQVSVILLDVNDCPPTFTS 2121
Query: 105 LPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALD 162
+ V VHA+D+D G N+ V YS+ P F + GD+R LD
Sbjct: 2122 QKMTYIQENTPVDTVVLAVHASDSDSGPNSYVEYSLHGPFSNKFSIGTIDGDVRLVGELD 2181
Query: 163 YEKQQLYLERVFLISK 178
E+ Y V K
Sbjct: 2182 REEISNYTLTVVATDK 2197
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 80 GGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
G ++ +VNI V D+ND P F ++ + +V G + + A+D DEG N VV Y
Sbjct: 847 GQITGEVSVNITVKDLNDNAPRFIHAVEHVSAVENWSTGHTIFQAKASDPDEGANGVVVY 906
Query: 139 SVPED 143
S+ ++
Sbjct: 907 SLKQN 911
Score = 36.2 bits (82), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE--DIP 145
V I VTD ND P F S + P G + V A D DEG N V Y + E
Sbjct: 1491 VTIWVTDQNDNIPTFLSQNALVAEPNIMIGSILTTVVAYDPDEGANGEVEYELVEGDSGT 1550
Query: 146 FVVDANTGDIRTNKAL 161
F++D +GDIR L
Sbjct: 1551 FIMDRYSGDIRLASQL 1566
>gi|292621593|ref|XP_002664697.1| PREDICTED: protocadherin-16-like [Danio rerio]
Length = 3237
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 85/174 (48%), Gaps = 24/174 (13%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------ATEHQG------- 74
VTL ++ATD+DSG GLV YR+ D D F+LD A + +
Sbjct: 1723 VTLFTIRATDQDSGDSGLVYYRITDG--DHFGDFHLDKKLGVLSTSRALDRESRAKYTLT 1780
Query: 75 -PIQDEG--GLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLAVGRVHATDADE 130
QD+G L+ST T++I V D+ND +P F S + G V V A+D DE
Sbjct: 1781 VEAQDQGIPSLTSTVTLDISVLDLNDNSPVFPSSSYSVEVSEDASAGSLVLEVSASDKDE 1840
Query: 131 GQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATS 182
G N+ V Y + + F+VD +TG I T LD EK Y +V+ + AT+
Sbjct: 1841 GSNSQVVYFLSRESSGMFIVDQHTGRIITAATLDREKVASYNFQVYAMDSSATN 1894
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA-SYFNLDPAT---- 70
S FY A ++ M+V ATD D G FG + Y L S F +D
Sbjct: 539 SKFYNASIKENAPARTCFMEVTATDADGGSFGSISYSLGSGQGSVTPSQFTVDKHNGQIC 598
Query: 71 ------EHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQ 115
QGP D GGLSS A V + + DIND P F + Y S+ +
Sbjct: 599 TTTSLDRDQGPANYDFTVTAVDGGGLSSVAYVRVDLIDINDNQPAFYPVSYAVSLSTQSA 658
Query: 116 DGLAVGRVHATDADEGQNA-VVYYSVPEDIP--FVVDANTGDIRTNKAL 161
G +V +V A D D +N V Y +VPE F ++ +TG I ++AL
Sbjct: 659 PGTSVLKVTAHDPDAAENGRVTYRTVPEGSSPFFTLNKDTGVISLSRAL 707
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 77/166 (46%), Gaps = 22/166 (13%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG---PIQDE------ 79
+G ++ V A D D G+ G V YR+ N F+++P T PI E
Sbjct: 1515 VGFVVVYVMAVDADQGENGRVTYRIQSGNVRGK--FSINPDTGSLSILRPIDREEEDLYN 1572
Query: 80 -------GGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
GL SS+ ++++V D+ND+ P FQ YE + E Q G V V A+D
Sbjct: 1573 LTIVAEDHGLQQRSSSQLLSVQVIDVNDEAPYFQESQYEAFIAENQPAGSTVLVVSASDM 1632
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
D+G N +V Y F + TG I T KALD E Q +Y V+
Sbjct: 1633 DQGTNGIVTYGSIVGDDFSIHPVTGVITTTKALDREAQGVYALTVY 1678
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 81/170 (47%), Gaps = 26/170 (15%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRLL---------DNNTDAASYFNLDPATEHQG 74
R+ G +V A+D+D+G G + YRLL + + ++ +LD E Q
Sbjct: 1081 RENLPAGTGFGRVSASDRDAGLNGRLSYRLLHLDRHFQINSHTGEISTKLSLD--RELQS 1138
Query: 75 PIQ-----DEGGL---SSTATVNIRVTDINDKNPEFQSL----PYEFSVPEGQ-DGLAVG 121
Q +GG S+T T I V D ND P F + EGQ G +G
Sbjct: 1139 SYQLIVVAQDGGTPPRSATGTAFITVLDENDNAPSFSNAQTGRELLLQALEGQPSGFLLG 1198
Query: 122 RVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
VHA D DEG+N ++YS+ P F ++ NTG++R++ AL + ++ Y
Sbjct: 1199 TVHAKDPDEGENGTIFYSMSGPRAERFTLNPNTGELRSSSALSHSERPEY 1248
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 76/173 (43%), Gaps = 27/173 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + G T++ V A+D D G G+V Y + F++ P T
Sbjct: 1610 YEAFIAENQPAGSTVLVVSASDMDQGTNGIVTYGSI-----VGDDFSIHPVTGVITTTKA 1664
Query: 71 ---EHQGP------IQDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQDGLA 119
E QG +D G + A +RVT D ND P F + Y VPE Q+ +
Sbjct: 1665 LDREAQGVYALTVYARDGGSPPNFAKTTVRVTVLDENDNRPAFGRVYYSLEVPENQEPVT 1724
Query: 120 VGRVHATDADEGQNAVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLY 169
+ + ATD D G + +VYY + + F +D G + T++ALD E + Y
Sbjct: 1725 LFTIRATDQDSGDSGLVYYRITDGDHFGDFHLDKKLGVLSTSRALDRESRAKY 1777
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 68/162 (41%), Gaps = 26/162 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------------LDPATEH 72
G ++QV A DKD G G V+Y +L N + +F+ +DP
Sbjct: 446 GSFVVQVTARDKDQGPNGDVQYSILQNEGTHSDWFSVDAVTGVVTTLTQLDYEIDPTPSI 505
Query: 73 QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG-LAVGRVHATDAD 129
D G LSSTA V + + DIND P F S Y S+ E V ATDAD
Sbjct: 506 TVVASDRGRPPLSSTAVVKVILQDINDNEPVFGSKFYNASIKENAPARTCFMEVTATDAD 565
Query: 130 EGQNAVVYYSVPED------IPFVVDANTGDIRTNKALDYEK 165
G + YS+ F VD + G I T +LD ++
Sbjct: 566 GGSFGSISYSLGSGQGSVTPSQFTVDKHNGQICTTTSLDRDQ 607
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE---- 142
+++ V DIND P F Y + E Q G + +V A+DADEG N +V Y +
Sbjct: 199 LDVIVQDINDNAPVFNQSRYHAMISENLQPGNNILQVFASDADEGDNGLVLYDINRRQSD 258
Query: 143 -DIPFVVDANTGDIRTNKALDYEKQQLY 169
D FV+D+ TG I NK LDYE ++++
Sbjct: 259 PDHYFVIDSRTGVITLNKPLDYEMRRVH 286
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 78/189 (41%), Gaps = 41/189 (21%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSG-KFGLVEYRLLDNNTDAASYFNLDPATEHQ 73
DSL Y ++ L +QV+A ++D G GL ++T A+ ++L P +
Sbjct: 959 DSLTYRVELKESTPLNTRFLQVRAVNRDGGITTGL-------SSTSASLAYHLHPDGDAA 1011
Query: 74 G--PIQDEGGL-----------------------------SSTATVNIRVTDINDKNPEF 102
G + D G L + +ATV + V D ND P F
Sbjct: 1012 GFGIVSDSGWLFVKSALDREAKEMYLLTVLATSGNGQLKKTGSATVRVSVMDENDNTPRF 1071
Query: 103 QSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKA 160
+V E G GRV A+D D G N + Y + D F ++++TG+I T +
Sbjct: 1072 TQERAFLAVRENLPAGTGFGRVSASDRDAGLNGRLSYRLLHLDRHFQINSHTGEISTKLS 1131
Query: 161 LDYEKQQLY 169
LD E Q Y
Sbjct: 1132 LDRELQSSY 1140
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 25/174 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A+ + E G ++Q+ A D DS G V+Y + ++ D + F +D T
Sbjct: 2554 YSAVVNEGAERGTEILQLFAIDPDSTPNGEVQYSI--SSGDDSELFTVDQWTGAVRLRRS 2611
Query: 71 -------EHQGPIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-V 120
H IQ D G + A V + + DIN+ P F S+ E Q A V
Sbjct: 2612 LDSEKQSSHMFVIQASDGQGHFALAPVTVEIKDINNNRPYFPLKSLTASIRENQPQNALV 2671
Query: 121 GRVHATDADEGQNAVVYYSVPEDI-----PFVVDANTGDIRTNKALDYEKQQLY 169
+HA D D+G + Y + + F+V+ +G++RT DYEK +
Sbjct: 2672 TILHAIDHDKGAYGELRYFLTYNAGNGKDSFLVNQTSGEVRTRFTFDYEKTNTF 2725
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 53/114 (46%), Gaps = 8/114 (7%)
Query: 61 ASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
AS +NL +G Q SS+ V I V D ND P F Y V EG + G
Sbjct: 2512 ASSYNLTIVVSDRGIPQR----SSSVPVLINVMDTNDNPPSFSRAEYSAVVNEGAERGTE 2567
Query: 120 VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ ++ A D D N V YS+ + F VD TG +R ++LD EKQ ++
Sbjct: 2568 ILQLFAIDPDSTPNGEVQYSISSGDDSELFTVDQWTGAVRLRRSLDSEKQSSHM 2621
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 25/157 (15%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--- 77
A R+ + + A D D G +G + Y L N + F ++ + G ++
Sbjct: 2659 ASIRENQPQNALVTILHAIDHDKGAYGELRYFLTYNAGNGKDSFLVN---QTSGEVRTRF 2715
Query: 78 -----------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
D G ++T TV + VT ++ +P F + F VPEG + G +
Sbjct: 2716 TFDYEKTNTFNFIAIAMDTGNYTATVTVQVFVTGEDEYDPVFTESDFAFHVPEGAKKGQS 2775
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDI 155
+G+V+A D D G + +V Y++ P F ++ +TG I
Sbjct: 2776 IGQVNANDEDGGVDGIVLYTLANSSPYFELNTSTGVI 2812
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 69/167 (41%), Gaps = 28/167 (16%)
Query: 30 GVTLMQVKATDKD-SGKFGLVEYRLLDNNTDAASYFNLDPATE--HQGPIQDEGGLSS-- 84
G + +A DKD SG V Y +L + +LDP T G + D SS
Sbjct: 1406 GSSFYTFQAVDKDGSGPNSEVHYSILQQWPNIPDLLSLDPTTGALSLGMMLDHEKTSSLL 1465
Query: 85 ------------------TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHA 125
+ T I VTD+ND P F S SV E Q G V V A
Sbjct: 1466 LVVQASDSALDVSQRRRGSVTARIFVTDVNDNEPVFISASV-VSVMEDQPVGFVVVYVMA 1524
Query: 126 TDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLY 169
DAD+G+N V Y + F ++ +TG + + +D E++ LY
Sbjct: 1525 VDADQGENGRVTYRIQSGNVRGKFSINPDTGSLSILRPIDREEEDLY 1571
Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 25/121 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G +++ V ATDKDSG+ G + YR++ F +DP+ + Q P
Sbjct: 2344 GSSVITVTATDKDSGENGRITYRVVSTK----DMFYIDPSNGTLFIKKEVEFDSQRPSIL 2399
Query: 76 ----IQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDA 128
D G L++ +TV + V+D+ND P F Y SV E + G + + A D
Sbjct: 2400 VVIEASDSGTPPLTALSTVQVHVSDVNDNAPVFHQTEYRASVSEDEVPGSTILTLEAADG 2459
Query: 129 D 129
D
Sbjct: 2460 D 2460
Score = 43.1 bits (100), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV 140
L + ++ I+V D+ND P F Y +PE G V +V A D D+G N V YS+
Sbjct: 410 LRAESSFTIQVIDVNDNPPLFDQQEYTQVIPEVAFPGSFVVQVTARDKDQGPNGDVQYSI 469
Query: 141 PEDIP-----FVVDANTGDIRTNKALDYE 164
++ F VDA TG + T LDYE
Sbjct: 470 LQNEGTHSDWFSVDAVTGVVTTLTQLDYE 498
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 36/201 (17%)
Query: 7 PSALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL 66
P L +S+SL R +G + +V+A D+DSG GL+ + L + A F++
Sbjct: 850 PVFLPSSSESLILPEDTR----MGTVVYKVQAEDRDSGPNGLLSFDLF--TSSAHRTFSI 903
Query: 67 DPATEH-----------------QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPY 107
D + H Q +D G LSST T+ I V N + P F SL Y
Sbjct: 904 DRNSGHLRLIGSLSYETMPRYDLQVIAKDSGAPQLSSTFTLVIHVQAENGQGPVFDSLTY 963
Query: 108 EFSVPEGQD-GLAVGRVHATDADEG--------QNAVVYYSVPED--IPFVVDANTGDIR 156
+ E +V A + D G ++ Y+ P+ F + +++G +
Sbjct: 964 RVELKESTPLNTRFLQVRAVNRDGGITTGLSSTSASLAYHLHPDGDAAGFGIVSDSGWLF 1023
Query: 157 TNKALDYEKQQLYLERVFLIS 177
ALD E +++YL V S
Sbjct: 1024 VKSALDREAKEMYLLTVLATS 1044
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 61/146 (41%), Gaps = 24/146 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------- 71
Y AM + + G ++QV A+D D G GLV Y + +D YF +D T
Sbjct: 218 YHAMISENLQPGNNILQVFASDADEGDNGLVLYDINRRQSDPDHYFVIDSRTGVITLNKP 277
Query: 72 --------HQGPIQDEGGLS----STATVNIRVTDINDKNPE----FQSLPYEFSVPEG- 114
H+ +Q S + + V I+V D ND P F S + EG
Sbjct: 278 LDYEMRRVHELVVQARDNASQPEVTNSFVTIQVRDYNDNQPTMTIIFLSEDGSPRISEGA 337
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV 140
Q G V R+ TD D G+ A V S+
Sbjct: 338 QPGQYVARISVTDPDYGEYANVNVSL 363
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD-EGQNAVVYYSV 140
S T+ I V D ND +PEF P VPE D G + A D D G N+ V+YS+
Sbjct: 1371 SDIITLIIDVQDSNDHSPEFPEDPIIIVVPENTDPGSSFYTFQAVDKDGSGPNSEVHYSI 1430
Query: 141 PEDIPFV-----VDANTGDIRTNKALDYEKQQLYL 170
+ P + +D TG + LD+EK L
Sbjct: 1431 LQQWPNIPDLLSLDPTTGALSLGMMLDHEKTSSLL 1465
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV-- 140
S A + I V D+ND P F YE ++ E G +V V ATD D G+N + Y V
Sbjct: 2310 SHANLTILVEDVNDNAPVFSQDLYEVTLAEHSPAGSSVITVTATDKDSGENGRITYRVVS 2369
Query: 141 PEDIPFVVDANTGDIRTNKALDYEKQQ 167
+D+ F +D + G + K ++++ Q+
Sbjct: 2370 TKDM-FYIDPSNGTLFIKKEVEFDSQR 2395
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 71/163 (43%), Gaps = 32/163 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G ++++V A D D+ + G V YR + ++ +F L+ T G I
Sbjct: 660 GTSVLKVTAHDPDAAENGRVTYRTVPEG--SSPFFTLNKDT---GVISLSRALHGKANSV 714
Query: 77 -------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHAT 126
QD GGL++ A VNI + P F+ Y F V E G VG V A+
Sbjct: 715 ITMVVSAQDGGGLTAPVNARVNISIVAGLVAPPVFEQAQYYFVVSEDALRGTQVGVVRAS 774
Query: 127 DADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQ 166
+ G + Y + P F VD+ TG +RT+ LD+E Q
Sbjct: 775 TKN-GVLKDISYIISSGDPTGYFTVDSETGALRTSLPLDHEAQ 816
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
SS VN+ + D+ND P FQ Y V E Q + +V A D D+GQN V YS+
Sbjct: 2104 SSFMAVNLLLQDVNDNLPRFQLHNYVAYVREAQGYDHPIIQVLANDLDQGQNGQVTYSIR 2163
Query: 142 EDIP---FVVDANTGDIRTNKALDYE 164
F +D TG I T +D E
Sbjct: 2164 SSSMSGLFKIDPITGSISTAAIMDRE 2189
Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 88 VNIRVTDINDKNPEFQSLPYE-FSVPE-GQDGLAVGRVHATDADEGQNAVV---YYSVPE 142
V I V+D+ND P F E +PE + G V +V A D D G N ++ ++
Sbjct: 838 VRITVSDVNDNAPVFLPSSSESLILPEDTRMGTVVYKVQAEDRDSGPNGLLSFDLFTSSA 897
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
F +D N+G +R +L YE Y
Sbjct: 898 HRTFSIDRNSGHLRLIGSLSYETMPRY 924
>gi|357614377|gb|EHJ69044.1| cadherin-like protein [Danaus plexippus]
Length = 3180
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 24/176 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
+L Y + + +G ++ + A D+D G G+V Y + N + F +DP T
Sbjct: 1292 ALSYQVIVPENEPIGSPILSLDAKDEDEGPNGIVRYTITSGNEEKE--FKVDPVTGTISI 1349
Query: 71 ----------EHQGPI--QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
E++ I +D G +TATV I +TDIND P+F Y + E
Sbjct: 1350 LRSLDYDEIQEYRLNITAKDLGFKPKETTATVTIILTDINDNAPQFNQSQYVAYLTENSP 1409
Query: 117 GLA-VGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+ + +V ATD D +NA++ Y + ++ F +D N+GDI +N+ D+E++ +Y
Sbjct: 1410 AKSFIFKVKATDIDSPKNAIIKYYIKNEMSALFSIDENSGDIFSNEVFDFEEKTVY 1465
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 78/167 (46%), Gaps = 28/167 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF---NLDPATEHQGPIQDEGGLSST 85
L +M VKA DKD G+ G VEY + + + YF N+D G + E L S
Sbjct: 248 LNTVIMTVKAVDKDEGRNGYVEY-FMAPDPEVDGYFTLGNVDGILRATGKLDRE--LKSN 304
Query: 86 AT------------------VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
T + I++ D ND +P F Y SVPE G +V +V AT
Sbjct: 305 FTILLTAKDRGDPPNVTKGKIFIKILDENDNSPVFDPKQYSASVPENASIGASVLQVSAT 364
Query: 127 DADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D DEG N V YS+ E+ F + +TG +R K L++E++ Y+
Sbjct: 365 DVDEGINGRVRYSIASGDENRDFSISEDTGIVRVAKNLNFERKSRYI 411
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 19/154 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRL---------LDNNTD---AASYFNLDPATEHQGPIQDEG 80
+ +VKATD DS K +++Y + +D N+ + F+ + T + I E
Sbjct: 1414 IFKVKATDIDSPKNAIIKYYIKNEMSALFSIDENSGDIFSNEVFDFEEKTVYNLQILAEN 1473
Query: 81 G---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVV 136
+ STA V + +T IN+ P+F + F V E + G VG + ATD D G + ++
Sbjct: 1474 PDSVMQSTAEVIVYITGINEYYPKFIQPVFHFDVSESAEVGTNVGVIQATDQDSGDDGII 1533
Query: 137 YYSV---PEDIPFVVDANTGDIRTNKALDYEKQQ 167
YY + D F +++ TG IR + LD E Q
Sbjct: 1534 YYLLVGSSNDKGFSINSQTGVIRVARYLDRETQN 1567
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 87/186 (46%), Gaps = 30/186 (16%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFN-- 65
++L Y A ++ T+++++A D DS + G + YRL+++ ++D+ F
Sbjct: 871 ENLLYNASIPEEESPPQTVIKIEAHDDDSNENGRISYRLVNDYEETFAIDSDSGEIFTNI 930
Query: 66 ------------LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
L A +H P L T+TV + V D ND P F L + +V E
Sbjct: 931 ALDRESIPFYEILVEAVDHGIP-----QLVGTSTVLVSVLDKNDNPPRFTRL-FSVNVTE 984
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYL 170
+ G V RV ++D D G NA YS E+ FV+D +G++ K LD E Q Y+
Sbjct: 985 NAEIGSFVIRVTSSDLDTGPNANATYSFVENPGEKFVIDPISGNVTVAKPLDRELQDEYI 1044
Query: 171 ERVFLI 176
+V I
Sbjct: 1045 LKVAAI 1050
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 22/170 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------AT 70
+ + E+G +++V ++D D+G Y ++N F +DP A
Sbjct: 977 LFSVNVTENAEIGSFVIRVTSSDLDTGPNANATYSFVEN---PGEKFVIDPISGNVTVAK 1033
Query: 71 EHQGPIQDE---------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-V 120
+QDE G S + I + D ND PEF+ Y F+ PE Q+ + V
Sbjct: 1034 PLDRELQDEYILKVAAIDGAWRSETPLTITIQDQNDNAPEFEYSYYSFNFPELQEKNSFV 1093
Query: 121 GRVHATDAD-EGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQL 168
G+V ATD D +G N+++ YS+ + F +D TG+I T ++Y++ +
Sbjct: 1094 GQVIATDKDKQGSNSIISYSLQQSSDLFSIDPATGEIVTKFMMNYKRTSV 1143
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDI 144
T+ ++VTD ND P F+ Y F +PE G VG V A D D G NA + Y+V D
Sbjct: 6 VTIVVQVTDTNDNPPMFKESAYSFDIPENAARGSVVGTVAAIDLDSGPNAQLTYNVISDW 65
Query: 145 P---FVVDANTGDIRTNKALDYEKQQLYL 170
F ++ TG LDYE+ Q Y+
Sbjct: 66 ANDVFSLNPQTGIFTLTARLDYEETQHYI 94
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 70/161 (43%), Gaps = 21/161 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY----------------FNLDPATEHQ 73
GV + ++ AT G GL++Y + N A + P E
Sbjct: 780 GVLVTRLSATSPKIGPTGLLQYSVAGGNVGDALRVEPMSGEIFITGRGFDYETMPLYEVW 839
Query: 74 GPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
++D L S + I+VTD ND P ++L Y S+PE + V ++ A D D
Sbjct: 840 FEVKDSDNPPLKSFIEIEIKVTDANDNAPILENLLYNASIPEEESPPQTVIKIEAHDDDS 899
Query: 131 GQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
+N + Y + D F +D+++G+I TN ALD E Y
Sbjct: 900 NENGRISYRLVNDYEETFAIDSDSGEIFTNIALDRESIPFY 940
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV 140
L+ + TV I V D+ND +P+FQ Y+ SV E + A D D G NA + YS+
Sbjct: 532 LTGSGTVKIIVQDVNDNSPDFQRQSYKTSVKENLPPETEILHPKAIDKDIGNNAKIRYSL 591
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
D F +D TG + TN LD E+ ++Y
Sbjct: 592 LGDKSERFRIDPVTGVVYTNATLDREEWEVY 622
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP---E 142
TV VT N +P F +L Y+ VPE + G + + A D DEG N +V Y++ E
Sbjct: 1275 TVTFVVTGENIYSPRFTALSYQVIVPENEPIGSPILSLDAKDEDEGPNGIVRYTITSGNE 1334
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
+ F VD TG I ++LDY++ Q Y
Sbjct: 1335 EKEFKVDPVTGTISILRSLDYDEIQEY 1361
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 25/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LDPATEHQGPI 76
E+G + ++ATD+DSG G++ Y L+ ++ D N LD T+++ +
Sbjct: 1512 EVGTNVGVIQATDQDSGDDGIIYYLLVGSSNDKGFSINSQTGVIRVARYLDRETQNRVVL 1571
Query: 77 ----QDEGGL----SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATD 127
++ GG+ + A V I + D ND PEF YE ++ EG Q G V +V A D
Sbjct: 1572 TVLAKNSGGIHGNDTDEAQVIISIQDGNDP-PEFLRNYYEATISEGAQVGEEVIQVKAVD 1630
Query: 128 AD-EGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D QN +S+ + + F +D G I + LD EK Y
Sbjct: 1631 KDVRSQNNQFSFSIIDGNLNQDFKIDPQGGSIEVARNLDREKVSTY 1676
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 72/175 (41%), Gaps = 24/175 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL--DNNTD-----------AASYFN 65
Y A + +G +++QV ATD D G G V Y + D N D A N
Sbjct: 344 YSASVPENASIGASVLQVSATDVDEGINGRVRYSIASGDENRDFSISEDTGIVRVAKNLN 403
Query: 66 LDPATEHQGPIQDEGGLS-----STATVNIRVTDINDKNPEFQSLPYEFSVPEG---QDG 117
+ + + I+ E TA ++I + DIND P F PY V E G
Sbjct: 404 FERKSRYILSIKAEDCGKDDIRFDTAELSISIQDINDNPPTFLDTPYLAYVMENVIPPYG 463
Query: 118 LAVGRVHATDADEG--QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+ V A DAD N V Y+ D F ++A++G I + LD E Q Y
Sbjct: 464 GYILTVQAYDADSPPFNNQVRYFIKEGDSDLFKINASSGQISLLRTLDREAQDEY 518
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 72/163 (44%), Gaps = 26/163 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------EHQGPI- 76
G + V A D DSG + Y ++ + A F+L+P T E Q I
Sbjct: 38 GSVVGTVAAIDLDSGPNAQLTYNVISDW--ANDVFSLNPQTGIFTLTARLDYEETQHYII 95
Query: 77 ----QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
QD G LS T TV I V D+ND P F + + + E G +V V ATD D
Sbjct: 96 VAQAQDNGHPSLSGTVTVYINVIDLNDNAPVFDPMSFSNEILEDVPVGSSVVTVSATDID 155
Query: 130 EGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G N + YS+ ++ F + +N G I T+ LD E +Y
Sbjct: 156 SGFNGKLTYSIFSGDDNQDFKISSN-GTIFTSSLLDRETIPIY 197
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 68/160 (42%), Gaps = 25/160 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLL--DNNTD-----AASYFNLDPATEHQGPIQD--- 78
+G +++ V ATD DSG G + Y + D+N D + F PI +
Sbjct: 142 VGSSVVTVSATDIDSGFNGKLTYSIFSGDDNQDFKISSNGTIFTSSLLDRETIPIYNLVI 201
Query: 79 ---------EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
E LS+T V I + D+ND PEF S P ++ E + V A D
Sbjct: 202 TAKDLAKPPEPRLSATVQVTILLKDVNDMAPEFIS-PKTTAISENIPLNTVIMTVKAVDK 260
Query: 129 DEGQNAVV-YYSVPE---DIPFVVDANTGDIRTNKALDYE 164
DEG+N V Y+ P+ D F + G +R LD E
Sbjct: 261 DEGRNGYVEYFMAPDPEVDGYFTLGNVDGILRATGKLDRE 300
>gi|403267946|ref|XP_003926054.1| PREDICTED: cadherin-19 [Saimiri boliviensis boliviensis]
Length = 772
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 82/176 (46%), Gaps = 45/176 (25%)
Query: 30 GVTLMQVKATDKD---SGKFGLVEYRLLDNNTDAASYFNLDPAT-------EHQGPIQDE 79
G ++QV A+D D SG + Y LL YF+++P T + +QDE
Sbjct: 164 GTLVIQVTASDADDPSSGNNARLLYSLLQ----GQPYFSVEPTTGVIRISSKMDRELQDE 219
Query: 80 --------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVH 124
G LS TA+V I+++D+ND P F+ Y SV E G ++GR+
Sbjct: 220 YWVIIQAKDMIGQPGALSGTASVLIKLSDVNDNKPIFKESLYRLSVSESAPTGTSIGRIM 279
Query: 125 ATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTN-----------KALDYEKQQLY 169
A D D G+NA + YS+ ED D+ T DI TN K +D+E Q Y
Sbjct: 280 AYDNDIGENAEMEYSIEED-----DSQTFDIITNNETQEGIVILKKKVDFEHQNHY 330
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V+DIND P+F PYE SVPE +G V +V A+DAD+ G NA + YS+ + P
Sbjct: 136 IKVSDINDNEPKFLDEPYEASVPEMSPEGTLVIQVTASDADDPSSGNNARLLYSLLQGQP 195
Query: 146 -FVVDANTGDIRTNKALDYEKQQLYL 170
F V+ TG IR + +D E Q Y
Sbjct: 196 YFSVEPTTGVIRISSKMDRELQDEYW 221
>gi|148672469|gb|EDL04416.1| cadherin EGF LAG seven-pass G-type receptor 1 [Mus musculus]
Length = 3010
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 85/180 (47%), Gaps = 28/180 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y R+ E+G ++ ++ATD D+ + YRLL+ A F +D
Sbjct: 373 YRERIRENLEVGYEVLTIRATDGDAPSNANMRYRLLEG---AGGVFEIDARSGVVRTRAV 429
Query: 69 -----ATEHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QD 116
A E+Q ++ + G LS++ATV+I V D ND P+F Y VPE
Sbjct: 430 VDREEAAEYQLLVEANDQGRNPGPLSASATVHIVVEDENDNYPQFSEKRYVVQVPEDVAV 489
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
AV RV ATD D+GQNA ++YS+ F + + +G + LD+E + Y R+
Sbjct: 490 NTAVLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLRI 549
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 76/159 (47%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQ-- 73
+G +++ ++A D+D+ ++ Y+L NT + LD E Q
Sbjct: 717 VGSSVLTLRARDRDANS--VITYQLTGGNTRNRFALSSQSGGGLITLALPLDYKQERQYV 774
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G S TA V I VTD N P FQS Y SV E + G ++ + ATD D G
Sbjct: 775 LAVTASDGTRSHTAQVFINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATISATDEDTG 834
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + +P F +D +TG I T LDYE Q Y
Sbjct: 835 ENARITYVLEDPVPQFRIDPDTGTIYTMTELDYEDQAAY 873
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 31/180 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
FY + +++QV ATD+DSG G + Y + ++ ++P + G I+
Sbjct: 911 FYQGSVFEDAPPSTSVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFY-IEPTS---GVIR 966
Query: 78 --------------------DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
D G LS++ + + V DIND P F+ E V E
Sbjct: 967 TQRRLDRENVAVYNLWALAVDRGSPNPLSASVGIQVSVLDINDNPPVFEKDELELFVEEN 1026
Query: 115 QD-GLAVGRVHATDADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
G V R+ A D DEG NA + Y + E ++P F +D +GD+R LD+E ++ Y+
Sbjct: 1027 SPVGSVVARIRANDPDEGPNAQIMYQIVEGNVPEVFQLDLLSGDLRALVELDFEVRRDYM 1086
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 78/176 (44%), Gaps = 39/176 (22%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQGPIQDE 79
+++V+ATD+D G+ + Y ++ N Y + + E+ I+ +
Sbjct: 493 VLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLRIKAQ 552
Query: 80 GG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
G ++S+ V+++V D+ND P F S P++ +V E G +V + A DAD G+N
Sbjct: 553 DGGRPPLINSSGLVSVQVLDVNDNAPIFVSSPFQAAVLENVPLGHSVLHIQAVDADAGEN 612
Query: 134 AVVYYSVPE--------------------DIPFVVDANTGDIRTNKALDYEKQQLY 169
A + Y + + D PF + ++G I LD E+ + Y
Sbjct: 613 ARLQYRLVDTASTIVGGSSVDSENPASAPDFPFQIHNSSGWITVCAELDREEVEHY 668
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 74/178 (41%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y + +G ++ + ATD+D+G+ + Y L D F +DP T
Sbjct: 806 SSHYTVSVSEDRPVGTSIATISATDEDTGENARITYVL----EDPVPQFRIDPDTGTIYT 861
Query: 71 ------EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E Q QD G S T ++ I + D ND P F Y+ SV E
Sbjct: 862 MTELDYEDQAAYTLAITAQDNGIPQKSDTTSLEILILDANDNAPRFLRDFYQGSVFEDAP 921
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V +V ATD D G N + Y+ D F ++ +G IRT + LD E +Y
Sbjct: 922 PSTSVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRENVAVY 979
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 72/170 (42%), Gaps = 37/170 (21%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPAT---------------- 70
G +++++A D D G G + Y+ L D ++ YF +D AT
Sbjct: 276 GTAVIELRAHDPDEGDAGRLSYQMEALFDERSNG--YFLIDAATGAVTTARSLDRETKDT 333
Query: 71 --------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
+H P + S+ + + V+D ND +P F+ Y + E + G V
Sbjct: 334 HVLKVSAVDHGSPRR-----SAATYLTVTVSDTNDHSPVFEQSEYRERIRENLEVGYEVL 388
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+ ATD D NA + Y + E F +DA +G +RT +D E+ Y
Sbjct: 389 TIRATDGDAPSNANMRYRLLEGAGGVFEIDARSGVVRTRAVVDREEAAEY 438
Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 42/182 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD---PATEHQGPIQ-------- 77
LG +++ ++A D D+G+ ++YRL+D + ++D PA+ P Q
Sbjct: 595 LGHSVLHIQAVDADAGENARLQYRLVDTASTIVGGSSVDSENPASAPDFPFQIHNSSGWI 654
Query: 78 ---------------------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
D G +SS+A+V+I V D+ND +P F YE + E
Sbjct: 655 TVCAELDREEVEHYSFGVEAVDHGSPAMSSSASVSITVLDVNDNDPMFTQPVYELRLNED 714
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQL 168
G +V + A D D N+V+ Y + + G I LDY++++
Sbjct: 715 AAVGSSVLTLRARDRD--ANSVITYQLTGGNTRNRFALSSQSGGGLITLALPLDYKQERQ 772
Query: 169 YL 170
Y+
Sbjct: 773 YV 774
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 99 NPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP------EDIPFVVDAN 151
+P+F Y+ SVPE + G AV + A D DEG + Y + + F++DA
Sbjct: 257 SPQFPLPSYQVSVPENEPAGTAVIELRAHDPDEGDAGRLSYQMEALFDERSNGYFLIDAA 316
Query: 152 TGDIRTNKALDYEKQQLYLERV 173
TG + T ++LD E + ++ +V
Sbjct: 317 TGAVTTARSLDRETKDTHVLKV 338
>gi|351694840|gb|EHA97758.1| Cadherin-8 [Heterocephalus glaber]
Length = 799
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 84/181 (46%), Gaps = 31/181 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + LG ++ V ATD D +G +L+ + + YF+++P T
Sbjct: 172 YHATVPEMSILGTSVTNVTATDADDPVYG-NSAKLVYSILEGQPYFSIEPETAIIKTALP 230
Query: 71 --------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
E+ IQ + GGLS T T+ + ++D+ND P+F Y FSVPE
Sbjct: 231 NMDREAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLSDVNDNPPKFAQSLYHFSVPEDVI 290
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQL 168
G A+GRV A D D G+NA Y + + +I A G IR K LD+E ++
Sbjct: 291 LGTAIGRVKANDQDIGENAQSSYDIIDGDGTALFEITSDAQAQDGIIRLRKPLDFETKKS 350
Query: 169 Y 169
Y
Sbjct: 351 Y 351
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND PEF + PY +VPE G +V V ATDAD+ G +A + YS+ E P
Sbjct: 155 IKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEGQP 214
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLYL 170
F ++ T I+T +D E ++ YL
Sbjct: 215 YFSIEPETAIIKTALPNMDREAKEEYL 241
Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNA--VVYYSVP 141
S V I+V D+ND PEF S F G+ G + V A D DE +N +Y +P
Sbjct: 478 SRVPVAIKVLDVNDNAPEFASEYEAFLCENGKPGQVIQTVSAMDKDEPKNGHYFLYSLLP 537
Query: 142 EDI---PFVVDANTGD----IRTNKALDYEKQQLYLERVFL 175
E + F + N + + + + +KQ++YL + +
Sbjct: 538 EMVNNPNFTIKKNEDNSLSILAKHNGFNRQKQEVYLLPIII 578
>gi|123704351|ref|NP_001074046.1| cadherin EGF LAG seven-pass G-type receptor 2 precursor [Danio
rerio]
gi|117938962|dbj|BAF36659.1| cadherin EGF LAG seven-pass G-type receptor 2 [Danio rerio]
Length = 2941
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 81/180 (45%), Gaps = 26/180 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y R+ E+G ++ V+ATD D+ G + Y LL++N F +D +
Sbjct: 356 YKESIRENLEIGYEVLTVRATDGDAPINGNILYHLLNSN-GTNDVFEIDSRSGVIRTRGL 414
Query: 71 -------------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QD 116
E +D G S+TATV+I V D ND P+F Y VPE
Sbjct: 415 VDRETVDSYMLMVEANDQGRDPGPRSATATVHIVVEDDNDNAPQFSEKRYIVQVPEDLTP 474
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ +V ATD D G NAVV++S+ F +DA TG + LDYE + Y R+
Sbjct: 475 NTEILQVTATDQDRGNNAVVHFSIMSGNTRGQFYIDAQTGKLDLVSQLDYEMNKEYTLRI 534
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 22/159 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNT-------------DAASYFNLDPATEHQGPIQDE 79
++QV ATD+D G +V + ++ NT D S + + E+ I+ +
Sbjct: 478 ILQVTATDQDRGNNAVVHFSIMSGNTRGQFYIDAQTGKLDLVSQLDYEMNKEYTLRIRAQ 537
Query: 80 GG----LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
G LS+ + V ++V DIND P F S P++ +V E G +V + A DAD G N
Sbjct: 538 DGGRPPLSNISGLVTVQVLDINDNAPIFVSTPFQATVLENVPVGYSVIHIQAVDADAGDN 597
Query: 134 AVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
+ + Y + E + PF ++ +TG I LD E Y
Sbjct: 598 SRLEYRLTETTANFPFTINNSTGWIVVAAELDRETVDFY 636
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPED 143
TA V + VTD N P FQS Y ++ E + G V + ATD D G+NA + Y + +
Sbjct: 755 TAKVYVNVTDANTHRPVFQSSHYTVNINEDRPVGTTVVMISATDEDTGENARITYIMDDS 814
Query: 144 IP-FVVDANTGDIRTNKALDYEKQQLY 169
IP F +DA++G + T LDYE Q Y
Sbjct: 815 IPQFNIDADSGAVTTQMELDYEDQVSY 841
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 28/174 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSST 85
+G T++ + ATD+D+G+ + Y ++D D+ FN+D A Q + E +S T
Sbjct: 787 VGTTVVMISATDEDTGENARITY-IMD---DSIPQFNIDADSGAVTTQMELDYEDQVSYT 842
Query: 86 ATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDA 128
+ R V D+ND +P FQ Y SV E +V +V ATD
Sbjct: 843 LAITARDNGIPQKSDTTYLEILVNDVNDNSPVFQRDRYLGSVMEDIPVFTSVLQVSATDR 902
Query: 129 DEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
D G N V+Y+ D F++++ +G +RT + LD E +Y + F + K
Sbjct: 903 DSGLNGRVFYTFQGGEDGDGDFIIESTSGIVRTLRRLDRENTAIYNLQAFAVDK 956
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 75/169 (44%), Gaps = 38/169 (22%)
Query: 32 TLMQVKATDKDSGKFGLVEY------------------------RLLDNNTDAASYFNLD 67
+++QV ATD+DSG G V Y R LD A +NL
Sbjct: 893 SVLQVSATDRDSGLNGRVFYTFQGGEDGDGDFIIESTSGIVRTLRRLDRENTA--IYNL- 949
Query: 68 PATEHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVH 124
Q D+G L + + + + D+ND P F+ ++ V E GL V +
Sbjct: 950 -----QAFAVDKGVPALKTAVDMQVTILDVNDNPPVFEKDEFDIFVEENSPIGLVVAHIS 1004
Query: 125 ATDADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
A+D DEG NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 1005 ASDPDEGSNAQIMYQIVEGNIPEVFQLDIFSGELTALTDLDYETRAEYV 1053
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 78/172 (45%), Gaps = 31/172 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEY---RLLDNNTDAASYFNLDPATEHQGPIQ--------- 77
G ++ +KA D D G+ G +EY L D+ ++ + F +DPA+ ++
Sbjct: 259 GTFVVVLKAVDPDEGEAGRLEYVLEALFDSRSN--NLFAVDPASGVVSTVEILDRETKDT 316
Query: 78 --------DEGGLSSTA--TVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
D G TA T+ + V+D ND +P F+ Y+ S+ E + G V V AT
Sbjct: 317 HVFRVTAVDHGTPRRTAMATLTVTVSDTNDHDPAFEQQDYKESIRENLEIGYEVLTVRAT 376
Query: 127 DADEGQNAVVYYSV-----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
D D N + Y + D+ F +D+ +G IRT +D E Y+ V
Sbjct: 377 DGDAPINGNILYHLLNSNGTNDV-FEIDSRSGVIRTRGLVDRETVDSYMLMV 427
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 67/163 (41%), Gaps = 32/163 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G+ + + A+D D G + Y++++ N F LD + + D
Sbjct: 996 IGLVVAHISASDPDEGSNAQIMYQIVEGNI--PEVFQLDIFSGELTALTDLDYETRAEYV 1053
Query: 79 ------EGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRV 123
L S ATV+I++ D ND P ++ F S P G +GR+
Sbjct: 1054 IVVQATSAPLVSRATVHIKLIDKNDNVPVLKNFQIIFNNYVTDKTNSFPSG----VIGRI 1109
Query: 124 HATDADEGQNAVVYYSVPEDIPFVV-DANTGDIRTNKALDYEK 165
A D D + ++ V+ + +TG+IR ++ALD +
Sbjct: 1110 PAQDPDVSDQLHYSFEAGNELKLVILNQSTGEIRLSRALDNNR 1152
>gi|114596466|ref|XP_001134749.1| PREDICTED: protocadherin-16 isoform 1 [Pan troglodytes]
Length = 1382
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 77/172 (44%), Gaps = 30/172 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN--NTDAASYFNLDPATEHQGPI 76
Y A + +G +QV A+D DSG +G +EY L D + +A F +DP H G I
Sbjct: 668 YNATIAEHAPVGHCFLQVTASDADSGLYGFIEYSLYDGFLSYEAPQAFRIDP---HDGQI 724
Query: 77 ---------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EG 114
+D GGLS+ A V + + D+ND +P F Y S+ E
Sbjct: 725 CVSQDIDRERDPATYDLLVKAKDGGGLSAQAFVRVDLEDVNDNHPVFNPSTYVTSISDET 784
Query: 115 QDGLAVGRVHATDADEG-QNAVVYYSVPEDIP--FVVDANTGDIRTNKALDY 163
Q G + V ATD D G V Y +P D+ F +D+ TG I L +
Sbjct: 785 QPGTEIINVLATDQDSGIYGTVAYELIPGDLSSLFTIDSTTGIIYLTSPLSH 836
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 60/130 (46%), Gaps = 28/130 (21%)
Query: 35 QVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ------ 77
++ A D DSGK G + Y LL + +F ++P T EH+G Q
Sbjct: 1212 KITAIDMDSGKNGQLLYFLLSD----GKFFKMNPNTGELINWVALDREHRGHHQMTVLVT 1267
Query: 78 DEGGLSSTAT--VNIRVTDINDKNPEF-QSLP---YEFSVPEGQD-GLAVGRVHATDADE 130
D G AT V + VTDIND P F Q LP V EGQ + V V A D DE
Sbjct: 1268 DRGSPPRNATMAVYVSVTDINDNRPFFPQCLPGKELHVKVLEGQPVNMLVTTVFAKDPDE 1327
Query: 131 GQNAVVYYSV 140
G NA V YSV
Sbjct: 1328 GNNAEVTYSV 1337
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 45/99 (45%), Gaps = 16/99 (16%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV-PEDI 144
+V +RV D ND P F+ Y +V E Q G V RV ATD D G N V YSV +
Sbjct: 281 SVELRVLDENDNPPVFEQDEYRAAVREDAQPGAEVCRVRATDRDLGPNGFVRYSVRARQV 340
Query: 145 P--------------FVVDANTGDIRTNKALDYEKQQLY 169
P F V+ +G +R + LD E Q +
Sbjct: 341 PGAGSGGGALGDAAYFAVEELSGVVRVRRPLDREAQAWH 379
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 69/167 (41%), Gaps = 30/167 (17%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE---HQGPI----- 76
D+ + G ++ V ATD+DSG +G V Y L+ D +S F +D T P+
Sbjct: 782 DETQPGTEIINVLATDQDSGIYGTVAYELIPG--DLSSLFTIDSTTGIIYLTSPLSHLES 839
Query: 77 ---------QDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEF----SVPEGQDGLAVG 121
QD GGL++ A V I + EF+ Y F VPE +G
Sbjct: 840 TTLSLMVSAQDGGGLTAVINADVTIHIFQTTLAPAEFERPKYTFLVYEDVPEDS---PIG 896
Query: 122 RVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQ 166
V A + + Y D+ F + G IRT K LD+E Q
Sbjct: 897 TVKAREPLNSSEPIFYRISSGDLGGKFSIHPRLGTIRTRKPLDHETQ 943
Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 23/109 (21%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQN------- 133
LS+ T+ +RV D+ND+ P F Y+ SV E G V V A+DADE +
Sbjct: 519 LSTEETLLLRVADLNDQPPLFSQQHYKASVSEAAAPGTVVMWVSASDADEAGSDHAWLRY 578
Query: 134 AVVYYSVPEDI---------------PFVVDANTGDIRTNKALDYEKQQ 167
VV S P ++ F +D+ +G I T + LD E Q+
Sbjct: 579 TVVQLSAPCNLGSLQSKMVHTAECGPSFAIDSESGAISTIRTLDREVQE 627
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPE 142
S+ VNI V D+ND +P F E + + G A+ A D D G+N ++ YS+
Sbjct: 961 SSTEVNITVMDVNDNHPAFLRTSDEIRISQTTPPGTALYLARAEDRDSGRNGLIRYSIAS 1020
Query: 143 DIP--FVVDANTGDIRTNKALDYEKQQ 167
P F +D G + N +L +Q+
Sbjct: 1021 PQPGVFAIDRALGVLFLNGSLGAGEQR 1047
Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 76 IQDEGGLSSTAT-VNIRVTDINDKNPEFQS----LPYEFS-VPEGQDGLAVGRVHATDAD 129
I ++G L + +T V +RV D ND +P F L E S VP+G +G++ A D D
Sbjct: 1164 IPEDGFLQNVSTTVIVRVWDENDNSPTFLHDVLFLTVEESPVPQG----VIGKITAIDMD 1219
Query: 130 EGQNA-VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQ 166
G+N ++Y+ + + F ++ NTG++ ALD E +
Sbjct: 1220 SGKNGQLLYFLLSDGKFFKMNPNTGELINWVALDREHR 1257
>gi|154152095|ref|NP_001093757.1| cadherin-19 precursor [Gallus gallus]
gi|150416782|gb|ABR68860.1| cadherin 19 [Gallus gallus]
Length = 776
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 84/178 (47%), Gaps = 29/178 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------------- 70
G ++ QV ATD D +G RLL + YF+++P T
Sbjct: 164 GTSVTQVTATDGDDPSYG-NNARLLYSLIQGQPYFSVEPKTGVIRMTSQMDRETKDQYLV 222
Query: 71 --EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATD 127
+ + + G S+TATV I ++D+ND P+FQ Y +V E G VGR+ A D
Sbjct: 223 VIQAKDMVGQAGAFSATATVTINLSDVNDNPPKFQQRLYYLNVSEEAPVGTTVGRLLAED 282
Query: 128 ADEGQNAVVYYSVPED----IPFVVDANT--GDIRTNKALDYEKQQLYLERVFLISKF 179
+D G+NA + Y + ED + D T G I K +DYE ++ + RV ++++
Sbjct: 283 SDIGENAAMNYFIEEDSSDVFGIITDRETQEGIIILKKRVDYESKRKHSVRVKAVNRY 340
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE +G +V +V ATD D+ G NA + YS+ + P
Sbjct: 136 IKVRDINDHEPQFLDGPYVATVPEMSPEGTSVTQVTATDGDDPSYGNNARLLYSLIQGQP 195
Query: 146 -FVVDANTGDIRTNKALDYEKQQLYL 170
F V+ TG IR +D E + YL
Sbjct: 196 YFSVEPKTGVIRMTSQMDRETKDQYL 221
>gi|73949365|ref|XP_848931.1| PREDICTED: protocadherin alpha-6 [Canis lupus familiaris]
Length = 818
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 73/149 (48%), Gaps = 17/149 (11%)
Query: 34 MQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVT 93
+ VK D+ + GLV + LD + + L AT DEG T TV + VT
Sbjct: 180 LDVKTNSDDNTQIGLVLRKSLDRE-EVPEHNLLLTAT-------DEGKPELTGTVQVLVT 231
Query: 94 --DINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP----- 145
D+ND P F+ YE + E +G V R++A+D DEG N + YS +P
Sbjct: 232 VLDVNDNAPSFEQTEYEVRIFENLGNGTVVIRLNASDRDEGVNGEISYSFNSLVPAMVGD 291
Query: 146 -FVVDANTGDIRTNKALDYEKQQLYLERV 173
F +D NTG+I T LD+EK LY RV
Sbjct: 292 QFRIDPNTGEIVTKGNLDFEKLNLYKIRV 320
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 75/176 (42%), Gaps = 36/176 (20%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRL-------------------LDNNTDAASYF 64
R+ +LG + + +D DSG G V L LD+ D S
Sbjct: 360 REDAQLGTVIALISVSDLDSGANGQVTCSLTPQVPFKLVSTFKNYYSLVLDSALDRESVA 419
Query: 65 NLDPATEHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAV 120
N + +GG LS+TA+V++ V D+ND P F Y V E G +
Sbjct: 420 NYALVVTAR-----DGGSPSLSATASVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHI 474
Query: 121 GRVHATDADEGQNAVVYYSVPED-------IPFV-VDANTGDIRTNKALDYEKQQL 168
V A DAD +NA+V YS+ E +V V A +G + + LD+E+ +L
Sbjct: 475 FTVSARDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYALQPLDHEELEL 530
Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 56/143 (39%), Gaps = 31/143 (21%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY---FNLDPATEHQGPIQDEGGL---- 82
G ++++ A+D+D G G + Y N+ A F +DP T G I +G L
Sbjct: 258 GTVVIRLNASDRDEGVNGEISYSF--NSLVPAMVGDQFRIDPNT---GEIVTKGNLDFEK 312
Query: 83 ------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+ TV +RV DIND P+ + E Q G + +
Sbjct: 313 LNLYKIRVDATDKGHPPMAGHCTVVLRVLDINDNVPQIALTSLSLPIREDAQLGTVIALI 372
Query: 124 HATDADEGQNAVVYYSVPEDIPF 146
+D D G N V S+ +PF
Sbjct: 373 SVSDLDSGANGQVTCSLTPQVPF 395
>gi|89994747|ref|NP_444375.2| protocadherin beta 20 precursor [Mus musculus]
gi|13876302|gb|AAK26071.1| protocadherin beta 20 [Mus musculus]
gi|21595186|gb|AAH31895.1| Protocadherin beta 20 [Mus musculus]
gi|26337851|dbj|BAC32611.1| unnamed protein product [Mus musculus]
gi|26454692|dbj|BAC32346.1| unnamed protein product [Mus musculus]
Length = 799
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 20/172 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY + +G ++ + A D D G +G + Y L + D F ++P +
Sbjct: 246 FYEVQVPEDMPIGSSITAISAKDLDMGIYGKISYSFLHASEDIRKTFEINPTSGEVNLRS 305
Query: 71 --------EHQGPIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
+ IQ D GGLS+ T++++V DIND PE ++PE V
Sbjct: 306 LMDFEVIQSYSVNIQATDGGGLSAKCTLSVKVLDINDNAPEVIMSSVTKAIPENASETLV 365
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVD---ANTGDIRTNKALDYEKQQLY 169
D D G N + S+ +D+PF++ N + + KALD E++ Y
Sbjct: 366 ALFSVRDQDSGDNGRILCSIQDDLPFILKPSFKNFFTLLSEKALDRERRAEY 417
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS- 139
L++ T+ ++V+DIND P F Y + E L +G + ATD D G NA + YS
Sbjct: 431 LTTQHTIRVQVSDINDNAPAFTQTSYTMFIYENNSPALHIGTISATDKDSGSNAHITYSL 490
Query: 140 VPEDIP-------FVVDANTGDIRTNKALDYEKQQLY 169
+P P ++A+ G + +ALDYE Q +
Sbjct: 491 LPAQDPELALASLISINADNGQLFALRALDYEVLQAF 527
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 72/168 (42%), Gaps = 27/168 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASY--FNLDPATEHQGPIQ 77
+G T + A D D G L +Y + + ++ D Y LD A +H+ +
Sbjct: 148 IGATFLIENAQDLDIGSNSLQDYSISPSSYFYVKIHDSGDGKIYPELVLDKALDHEEESE 207
Query: 78 D-------EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
+GG S T + I+V DIND PEF YE VPE G ++ + A
Sbjct: 208 LRLTLTALDGGSPPRSGTTLIVIKVLDINDNAPEFAQSFYEVQVPEDMPIGSSITAISAK 267
Query: 127 DADEGQNAVVYYS---VPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
D D G + YS EDI F ++ +G++ +D+E Q Y
Sbjct: 268 DLDMGIYGKISYSFLHASEDIRKTFEINPTSGEVNLRSLMDFEVIQSY 315
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 68/170 (40%), Gaps = 35/170 (20%)
Query: 36 VKATDKDSGKFGLVEYRLL-------------DNNTDAASYFNLDP-------ATEHQGP 75
+ ATDKDSG + Y LL N D F L A E Q
Sbjct: 473 ISATDKDSGSNAHITYSLLPAQDPELALASLISINADNGQLFALRALDYEVLQAFEFQVG 532
Query: 76 IQDEG--GLSSTATVNIRVTDINDKNP------EFQSLPYEFSVPE-GQDGLAVGRVHAT 126
D G LSS V + V D ND P + S P +P + G V +V A
Sbjct: 533 ATDRGSPALSSQTLVRVVVLDDNDNAPFVLYPMQNASAPCTELLPRVAEPGYLVTKVVAV 592
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL---DYEKQQLYL 170
D D GQNA + + + E F V A+ G++RT + L D K +L L
Sbjct: 593 DRDSGQNAWLSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDVPKHRLVL 642
>gi|354490726|ref|XP_003507507.1| PREDICTED: protocadherin Fat 1-like [Cricetulus griseus]
gi|344246355|gb|EGW02459.1| Protocadherin Fat 1 [Cricetulus griseus]
Length = 4589
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 75/160 (46%), Gaps = 23/160 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG---- 74
G +MQV ATD D + Y L + A F L+P T E Q
Sbjct: 3040 GKLVMQVSATDADIRSNAEITYTLFGS---GAEKFKLNPDTGELRTLAPLDREEQAVYNL 3096
Query: 75 --PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D GG S AT+ + + D+ND PEF + PY +V E + G + RV ATDAD G
Sbjct: 3097 LVKATDGGGRSCQATIVLTLEDVNDNAPEFTADPYTITVFENTEPGTLLTRVQATDADAG 3156
Query: 132 QNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
N + YS+ + D F + +G I+ K LD E+Q +Y
Sbjct: 3157 LNRKISYSLIDSADGQFSISEVSGIIQLEKHLDREQQAVY 3196
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 80/165 (48%), Gaps = 22/165 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDP 68
Y A + L + QVKA D+DSG + + Y ++++ Y N LD
Sbjct: 2498 YEAELAENAPLHTLVAQVKAMDRDSGIYSHITYHIVNDFAKDRFYVNDRGQIFTLEKLDR 2557
Query: 69 ATEHQGPI------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVG 121
T + I +D GG + TVN+ +TD ND P+F+S YE ++ G +V
Sbjct: 2558 ETPAEKVISIRLMAKDAGGKVAFCTVNVILTDDNDNAPQFRSTKYEVNIGSSAAKGTSVV 2617
Query: 122 RVHATDADEGQNAVVYYSVPEDIPFV-----VDANTGDIRTNKAL 161
+V A+DADEG NA V Y++ D V ++ TG I T ++L
Sbjct: 2618 KVFASDADEGSNADVTYAIEADSESVKENLEINKLTGLITTKESL 2662
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 90/178 (50%), Gaps = 33/178 (18%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
++ ++ DK E+ ++QV+ATDKD G G V Y +L +TD F++D AT
Sbjct: 828 YFVEVSEDK-EVNSEIIQVEATDKDLGPSGHVTYSIL-TDTDR---FSIDSATGVVRIIQ 882
Query: 71 --------------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
E + +E L ST + + + D+ND P+F +P +SV +D
Sbjct: 883 PLDREVQPVHYLKIEARDQATEEPRLFSTVLLKVSLDDVNDNPPKF--IPPNYSVKVRED 940
Query: 117 ---GLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
G + + A D D GQ++ V YS+ + + F VD +G +R + LD+EK+Q+Y
Sbjct: 941 LPEGTIIMWLEAYDPDVGQSSQVRYSLLDHGEGHFDVDKLSGAVRIVQQLDFEKKQVY 998
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 77/169 (45%), Gaps = 25/169 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--------TDAASYF---NLD 67
YGA + +G ++QV A +D + Y ++ N + + F NLD
Sbjct: 3236 YGATVSEDILIGTEVLQVYAASRDIEANAEITYSIISGNEHGKFSMDSKTGAIFIIENLD 3295
Query: 68 PATEHQGPIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--- 118
+ H+ + E GG LS ATVNI V+DIND P F Y V G+D
Sbjct: 3296 YESSHEYYLTVEATDGGTPSLSDVATVNINVSDINDNTPVFSQDTYTTVV--GEDAALEQ 3353
Query: 119 AVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYE 164
+V + A DAD N+ + YS+ E PF +D G+++ K LD E
Sbjct: 3354 SVITIMADDADGPSNSHIRYSIIEGNQGSPFTIDPIRGEVKVTKPLDRE 3402
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE 142
++ V ++V N PEF Y+ S E G V RV A D DEG+N V YS+
Sbjct: 446 ASTKVMVKVVGTNSNPPEFTQTAYKASFDENVPIGTTVMRVSAVDPDEGENGYVTYSIAN 505
Query: 143 --DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSY 183
+PFV+D TG + T++ LDYE + RV+ + A+ +
Sbjct: 506 LNHVPFVIDHFTGSVSTSENLDYE----LMPRVYTLRIRASDW 544
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 23/150 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQ 73
+G ++QVKATD DS V Y++ N++ + +F++D T +H+
Sbjct: 2299 IGTPVLQVKATDSDSEPNRGVSYQMFGNHSKSHDHFHIDSNTGLISLVRALDYEQFQQHK 2358
Query: 74 GPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDA 128
++ +GG LSS V + VTD+ND P F+ YE + E G V V A DA
Sbjct: 2359 VFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQIYEAKISEHAAHGHFVMCVKACDA 2418
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDI 155
D + YS+ + FV+D+ TG I
Sbjct: 2419 DSSDLDKLEYSILSGNDHKSFVIDSETGII 2448
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 14/142 (9%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKN 99
DK SG+ L + LD+ T F++ D+ + ++ V+I+V D ND +
Sbjct: 2755 DKQSGRLKL--EKSLDHETTKWYQFSILARC-----TMDDYEVVASIDVSIQVKDANDNS 2807
Query: 100 PEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE----DI--PFVVDANT 152
P +S PYE F V G V ++ A+D D G N V YS+ + DI F ++ T
Sbjct: 2808 PVLESNPYEAFIVENLPGGSRVIQIRASDLDSGTNGQVMYSLDQSQGADIIESFAINVET 2867
Query: 153 GDIRTNKALDYEKQQLYLERVF 174
G I T K LD+E++ Y +V
Sbjct: 2868 GWITTLKELDHEERASYQIKVI 2889
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 85/189 (44%), Gaps = 35/189 (18%)
Query: 8 SALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD 67
+A E T+D Y + E G L +V+ATD D+G + Y L+D+ A F++
Sbjct: 3122 NAPEFTADP--YTITVFENTEPGTLLTRVQATDADAGLNRKISYSLIDS---ADGQFSI- 3175
Query: 68 PATEHQGPIQ--------------------DEG---GLSSTATVNIRVTDINDKNPEFQS 104
+E G IQ D+G L++T+TV + V DIND P F+
Sbjct: 3176 --SEVSGIIQLEKHLDREQQAVYTLTLKAVDQGVPRKLTATSTVVVSVLDINDNPPVFEY 3233
Query: 105 LPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKA 160
Y +V E G V +V+A D NA + YS+ E F +D+ TG I +
Sbjct: 3234 REYGATVSEDILIGTEVLQVYAASRDIEANAEITYSIISGNEHGKFSMDSKTGAIFIIEN 3293
Query: 161 LDYEKQQLY 169
LDYE Y
Sbjct: 3294 LDYESSHEY 3302
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVY 137
+G SS A V ++V D ND +P + Y ++PE G V +V ATDAD NA +
Sbjct: 3001 DGTFSSKARVEVKVLDANDNSPVCEKTLYSDTIPEDALPGKLVMQVSATDADIRSNAEIT 3060
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ F ++ +TG++RT LD E+Q +Y
Sbjct: 3061 YTLFGSGAEKFKLNPDTGELRTLAPLDREEQAVY 3094
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 72/162 (44%), Gaps = 28/162 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASY--FNLDPATE-------------HQGPI- 76
++Q+ A DKD K L+ L ++ D S F LDPAT HQ +
Sbjct: 1476 ILQISAVDKDE-KNKLI--YTLQSSIDPVSLKKFRLDPATGALYTSEKLDHEAIHQHMLT 1532
Query: 77 -----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
QD + A + + V+D+ND P F S YE V E G V +V A D D+
Sbjct: 1533 VMVRDQDVPVKRNFARIIVNVSDMNDHAPWFTSSSYEGRVYESAAVGSVVLQVTALDKDK 1592
Query: 131 GQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
G+NA V YS+ F +D G I+T + LD Q Y
Sbjct: 1593 GKNAEVLYSIESGNIGNSFTIDPILGSIKTARELDRSNQVEY 1634
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 59/144 (40%), Gaps = 2/144 (1%)
Query: 37 KATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIN 96
KA + G F + R NT + D T ++ + V ++V D N
Sbjct: 85 KAEEHVLGDFCFLRIRTKGGNTAILNREVRDHYTLIIKAVERNSNAEARTKVRVQVLDTN 144
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGD 154
D P F Y S+PE ++ RV ATDAD G N YYS + F + +G
Sbjct: 145 DLRPLFSPTSYSVSLPENTAIRTSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGV 204
Query: 155 IRTNKALDYEKQQLYLERVFLISK 178
+ LD+ + QLY + + +
Sbjct: 205 VVLTGRLDFLETQLYELEILAVDR 228
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 11/101 (10%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR--------VHATDADEG 131
GLS+ TV + + D ND P F Y V E +V + ATDAD
Sbjct: 1744 AGLSANTTVTVHMQDENDNPPVFTRAEYSGFVSESASVNSVVLTDRNVPLVIRATDADRE 1803
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
NA++ Y + E F +DA TG I T +LDYE+ +++
Sbjct: 1804 SNALLVYQIVEPSVHNYFAIDATTGAIHTVLSLDYEETRVF 1844
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 76/174 (43%), Gaps = 38/174 (21%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL--------------------------LDNNTDAASY 63
G ++Q++A+D DSG G V Y L LD+ + ASY
Sbjct: 2826 GSRVIQIRASDLDSGTNGQVMYSLDQSQGADIIESFAINVETGWITTLKELDHE-ERASY 2884
Query: 64 FNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
A++H +Q LSSTA V++ VTD+ND P F + Y+ +V E G +
Sbjct: 2885 QIKVIASDHGEKVQ----LSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSEDDPPGGVIAI 2940
Query: 123 VHATDAD--EGQNAVVYYSVPEDI--PFVVD--ANTGDIRTNKALDYEKQQLYL 170
+ TDAD E V Y+ D F V+ N + K LD E++ YL
Sbjct: 2941 LSTTDADSEEINRQVTYFITGGDALGQFAVENIQNEWKVYVKKPLDREQKDSYL 2994
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 76/182 (41%), Gaps = 29/182 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y R+ G +M ++A D D G+ V Y LLD+ +F++D + +Q
Sbjct: 933 YSVKVREDLPEGTIIMWLEAYDPDVGQSSQVRYSLLDH---GEGHFDVDKLSGAVRIVQQ 989
Query: 78 ----------------DEG---GLSSTATVNIRVTDINDK--NPEFQSLPYEFSVPEG-Q 115
D+G LSST V + V D+N+ P F S + V E
Sbjct: 990 LDFEKKQVYNLTIRAKDKGKPVSLSSTCYVEVEVVDMNENLHPPVFSSFVEKGVVKEDVP 1049
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLER 172
G +V V A D D G++ + YS+ + F +D TG I T+ LD E Y
Sbjct: 1050 TGSSVMTVSAHDEDTGRDGEIRYSIRDGSGVGVFRIDEVTGVIETSDRLDRESTSHYWLT 1109
Query: 173 VF 174
V+
Sbjct: 1110 VY 1111
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 28/175 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
+L Y A+ + E+G + V A D+DSG+ G V Y L +++ +F + P+
Sbjct: 2084 NLPYYAVVKVDAEVGHVIRYVTAIDRDSGRNGEVHYYLKEHH----DHFQIGPSGDISLK 2139
Query: 71 ---EHQG---------PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
EH +D G + +A V + +T +N P F+ Y +PE Q
Sbjct: 2140 KQFEHDTLNKEYLVTVVAKDGGSPAFSAEVLVPITVMNKAMPVFEKAFYSAEIPENIQMH 2199
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
V V A ++ EG V+YS+ + P F ++ NTG I LD+E Y
Sbjct: 2200 SPVVHVQA-NSPEGLK--VFYSITDGDPFSQFTINFNTGVINVIAPLDFESHPAY 2251
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 23/175 (13%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQGPIQD 78
G ++ +G + + ATD DSG G + Y + N D+ +++ + P+
Sbjct: 724 GIEVKENLPVGANIAFMNATDLDSGFNGKLVYAISGGNDDSCFTIDMESGMLKVLSPLDR 783
Query: 79 EGGLSSTATVNIRVTDI------------------NDKNPEFQSLPYEFSVPEGQD-GLA 119
E ++ T+NI V D+ ND PEF Y V E ++
Sbjct: 784 E--VTDKYTLNITVYDLGIPQRAAWRLLDVTVLDANDNPPEFLQESYFVEVSEDKEVNSE 841
Query: 120 VGRVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ +V ATD D G + V YS+ D F +D+ TG +R + LD E Q ++ ++
Sbjct: 842 IIQVEATDKDLGPSGHVTYSILTDTDRFSIDSATGVVRIIQPLDREVQPVHYLKI 896
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 81/178 (45%), Gaps = 34/178 (19%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-- 70
TS+ ++Y + + + V+++Q++A D DS + Y++ N +F++ P T
Sbjct: 1140 TSEPVYYPEIIENSPK-DVSVVQIEAFDPDSSSSDKLTYKITSGNPQG--FFSIHPKTGL 1196
Query: 71 --------------EH--QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH + + D G S+ A V +++ D ND P+F Y+ +P
Sbjct: 1197 ITTTSRKLDREQQDEHILEVTVTDNGTPPRSTIARVIVKILDENDNKPQFLQKFYKIRLP 1256
Query: 113 EGQ--DG------LAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNK 159
E + DG + RV A D DEG NA + YS+ E F ++ TG + + K
Sbjct: 1257 EREKADGERSVKREPLYRVIAADKDEGPNAELSYSIEEGNEHGRFSIEPKTGVVSSKK 1314
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 73/163 (44%), Gaps = 28/163 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------ATEHQGPIQ---- 77
+G ++QV A DKD GK V Y + N + F +DP A E Q
Sbjct: 1578 VGSVVLQVTALDKDKGKNAEVLYSIESGNI--GNSFTIDPILGSIKTARELDRSNQVEYD 1635
Query: 78 ------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
D+G +S +V+I VT ++ +P+F S Y + E G VG V A
Sbjct: 1636 LIVKATDQGNPPMSEMTSVHIAVTVADNASPKFTSKEYSVEISEAVGIGTFVGMVSA--- 1692
Query: 129 DEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
Q++V+Y ++ F ++ ++G I T K LD+E +Y
Sbjct: 1693 -HSQSSVMYEIKDGNVGDAFDINPHSGSIITQKDLDFETLSIY 1734
Score = 42.4 bits (98), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G + V+I V DIND P F Y ++ E G V +V ATD+D N V Y
Sbjct: 2263 GAHAEVFVDIIVEDINDNPPVFVQQSYTTTLSEAAVIGTPVLQVKATDSDSEPNRGVSYQ 2322
Query: 140 V-----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
+ F +D+NTG I +ALDYE+ Q + +VF+
Sbjct: 2323 MFGNHSKSHDHFHIDSNTGLISLVRALDYEQFQQH--KVFV 2361
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY 137
+G + V I+V D ND P+F + YE +VPE + + ++ A D DE +N ++Y
Sbjct: 1434 DGTTTILTQVLIKVIDTNDHRPQFSTSKYEVTVPEDTEPETEILQISAVDKDE-KNKLIY 1492
Query: 138 YSVPEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERVFL 175
P F +D TG + T++ LD+E ++ V +
Sbjct: 1493 TLQSSIDPVSLKKFRLDPATGALYTSEKLDHEAIHQHMLTVMV 1535
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 83 SSTATVNIRVT--DINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNAVVYYS 139
S+ A V ++VT D ND P F +LPY V + + G + V A D D G+N V+Y
Sbjct: 2061 SAVAHVVVKVTIEDQNDNAPVFVNLPYYAVVKVDAEVGHVIRYVTAIDRDSGRNGEVHYY 2120
Query: 140 VPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
+ E +GDI K +++ L + +L++ A
Sbjct: 2121 LKEHHDHFQIGPSGDISLKKQFEHDT----LNKEYLVTVVA 2157
Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 30/170 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDN---------------------NTDAASYFNLDP 68
G ++M V A D+D+G+ G + Y + D + ++ S++ L
Sbjct: 1051 GSSVMTVSAHDEDTGRDGEIRYSIRDGSGVGVFRIDEVTGVIETSDRLDRESTSHYWLTV 1110
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
QG + LSS V I V D+ND P+ Y + E ++V ++ A D
Sbjct: 1111 YATDQGVVP----LSSFIEVYIEVEDVNDNAPQTSEPVYYPEIIENSPKDVSVVQIEAFD 1166
Query: 128 ADEGQNAVVYYSVPEDIP---FVVDANTGDI-RTNKALDYEKQQLYLERV 173
D + + Y + P F + TG I T++ LD E+Q ++ V
Sbjct: 1167 PDSSSSDKLTYKITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILEV 1216
Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 27/127 (21%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYF-NLD----------- 67
+G T+M+V A D D G+ G V Y + +D+ T + S NLD
Sbjct: 479 IGTTVMRVSAVDPDEGENGYVTYSIANLNHVPFVIDHFTGSVSTSENLDYELMPRVYTLR 538
Query: 68 -PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHA 125
A++ P + E + +T T+N ++ND P F+ + E ++P G + V A
Sbjct: 539 IRASDWGLPYRREVEVLATITLN----NLNDNTPLFEKINCEGTIPRDLGVGEQITTVSA 594
Query: 126 TDADEGQ 132
DADE Q
Sbjct: 595 IDADELQ 601
>gi|148678204|gb|EDL10151.1| mCG141284 [Mus musculus]
Length = 806
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 20/172 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY + +G ++ + A D D G +G + Y L + D F ++P +
Sbjct: 253 FYEVQVPEDMPIGSSITAISAKDLDMGIYGKISYSFLHASEDIRKTFEINPTSGEVNLRS 312
Query: 71 --------EHQGPIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
+ IQ D GGLS+ T++++V DIND PE ++PE V
Sbjct: 313 LMDFEVIQSYSVNIQATDGGGLSAKCTLSVKVLDINDNAPEVIMSSVTKAIPENASETLV 372
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVD---ANTGDIRTNKALDYEKQQLY 169
D D G N + S+ +D+PF++ N + + KALD E++ Y
Sbjct: 373 ALFSVRDQDSGDNGRILCSIQDDLPFILKPSFKNFFTLLSEKALDRERRAEY 424
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS- 139
L++ T+ ++V+DIND P F Y + E L +G + ATD D G NA + YS
Sbjct: 438 LTTQHTIRVQVSDINDNAPAFTQTSYTMFIYENNSPALHIGTISATDKDSGSNAHITYSL 497
Query: 140 VPEDIP-------FVVDANTGDIRTNKALDYEKQQLY 169
+P P ++A+ G + +ALDYE Q +
Sbjct: 498 LPAQDPELALASLISINADNGQLFALRALDYEVLQAF 534
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 72/168 (42%), Gaps = 27/168 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASY--FNLDPATEHQGPIQ 77
+G T + A D D G L +Y + + ++ D Y LD A +H+ +
Sbjct: 155 IGATFLIENAQDLDIGSNSLQDYSISPSSYFYVKIHDSGDGKIYPELVLDKALDHEEESE 214
Query: 78 D-------EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
+GG S T + I+V DIND PEF YE VPE G ++ + A
Sbjct: 215 LRLTLTALDGGSPPRSGTTLIVIKVLDINDNAPEFAQSFYEVQVPEDMPIGSSITAISAK 274
Query: 127 DADEGQNAVVYYS---VPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
D D G + YS EDI F ++ +G++ +D+E Q Y
Sbjct: 275 DLDMGIYGKISYSFLHASEDIRKTFEINPTSGEVNLRSLMDFEVIQSY 322
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 68/170 (40%), Gaps = 35/170 (20%)
Query: 36 VKATDKDSGKFGLVEYRLL-------------DNNTDAASYFNLDP-------ATEHQGP 75
+ ATDKDSG + Y LL N D F L A E Q
Sbjct: 480 ISATDKDSGSNAHITYSLLPAQDPELALASLISINADNGQLFALRALDYEVLQAFEFQVG 539
Query: 76 IQDEG--GLSSTATVNIRVTDINDKNP------EFQSLPYEFSVPE-GQDGLAVGRVHAT 126
D G LSS V + V D ND P + S P +P + G V +V A
Sbjct: 540 ATDRGSPALSSQTLVRVVVLDDNDNAPFVLYPMQNASAPCTELLPRVAEPGYLVTKVVAV 599
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL---DYEKQQLYL 170
D D GQNA + + + E F V A+ G++RT + L D K +L L
Sbjct: 600 DRDSGQNAWLSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDVPKHRLVL 649
>gi|148683471|gb|EDL15418.1| mCG114390 [Mus musculus]
Length = 2572
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 83/174 (47%), Gaps = 21/174 (12%)
Query: 23 ARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLDPA 69
R+ E+G + ++ A D D+ G V Y +L N D A + +
Sbjct: 871 VREDAEVGAVVHRITAQDPDAEMNGEVAYSILSGNEDMVFVLDSSSGLLRIACPLDYEVK 930
Query: 70 TEH-QGPIQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVH 124
T+H + +GG+ SS+ T+ I V D+ND+ P F+ L YE SV E Q G+ V RV
Sbjct: 931 TQHILTLVAHDGGMPARSSSQTLTITVLDVNDETPAFKQLLYETSVKENQSPGVFVTRVE 990
Query: 125 ATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
A D D G N+ + + P F ++ +TG++ T D E Q ++ RV +
Sbjct: 991 AEDTDSGVNSKHQFEIMPGPAFGLFEINPDTGEVVTAVTFDREAQGIFRLRVLV 1044
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 77/171 (45%), Gaps = 24/171 (14%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------ 70
L Y ++ GV + +V+A D DSG ++ ++ A F ++P T
Sbjct: 970 LLYETSVKENQSPGVFVTRVEAEDTDSGVNSKHQFEIMPG--PAFGLFEINPDTGEVVTA 1027
Query: 71 -----EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG 117
E QG ++D G LSSTA + + D ND PEF L ++ + E +D
Sbjct: 1028 VTFDREAQGIFRLRVLVRDGGVPSLSSTADIICTIEDENDHAPEFIVLHHDIEILENRDP 1087
Query: 118 LAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEK 165
V V A D D G N V Y + E D F + +G++ T +ALD E+
Sbjct: 1088 EVVYTVLAFDMDAGNNGAVTYHIAEGNTDEYFAIHTTSGELSTTRALDREQ 1138
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 25/177 (14%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------ 70
L Y + R+ E+G ++ + A D+D G G VEY L++ + A F +D T
Sbjct: 1179 LHYQSSIREDAEVGTVVLVLSAVDRDEGLNGQVEYFLMEEVSGA---FTIDHVTGILRTS 1235
Query: 71 ---------EH--QGPIQD---EGGLSSTATVNIRVTDINDKNPEFQSLPYE-FSVPEGQ 115
+H Q +D +G SS ++ I VTD ND +P ++ P + F P
Sbjct: 1236 HALDREARSQHTFQAVARDCSTQGAKSSVLSILISVTDANDNDPVWEENPVDAFISPMLA 1295
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLE 171
V + A+D D G N V +S + F +D TG+++ + L E ++L+
Sbjct: 1296 LNQTVVHLRASDPDAGPNGTVTFSFADRQSVFSIDGYTGEVKLQQNLSSEHFPIWLQ 1352
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 70/156 (44%), Gaps = 30/156 (19%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------------- 82
V A D D+G G V Y + + NTD YF + + G + L
Sbjct: 1093 VLAFDMDAGNNGAVTYHIAEGNTD--EYFAIHTTS---GELSTTRALDREQISNFTLTIL 1147
Query: 83 ---------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQ 132
SS +++RV D ND +P F L Y+ S+ E + G V + A D DEG
Sbjct: 1148 CSDLGNPPRSSAMQLHVRVLDDNDHSPAFPMLHYQSSIREDAEVGTVVLVLSAVDRDEGL 1207
Query: 133 NAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQ 166
N V Y + E++ F +D TG +RT+ ALD E +
Sbjct: 1208 NGQVEYFLMEEVSGAFTIDHVTGILRTSHALDREAR 1243
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---P 141
T + + D+ND +P F S P + + + G V R+ A D D N V YS+
Sbjct: 846 TLVAEVVILDVNDHSPTFVSYPITYVREDAEVGAVVHRITAQDPDAEMNGEVAYSILSGN 905
Query: 142 EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
ED+ FV+D+++G +R LDYE + ++
Sbjct: 906 EDMVFVLDSSSGLLRIACPLDYEVKTQHI 934
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 71/185 (38%), Gaps = 28/185 (15%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF-------- 64
T S Y A ++ +G + V A D D G + Y ++ N Y
Sbjct: 1869 TFSSRRYQAHVKESTPVGSHITMVSADDPDKGSHAEIIYGIISGNEKEHFYLEDRTGVLY 1928
Query: 65 -----NLDPATEHQGPIQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ + IQ +E S A V+I V D ND +P+F S PE
Sbjct: 1929 LVKPLDYEETVAFTLTIQATDEEEKHVSFAAVHISVLDDNDHSPQFLSSTLACITPENLP 1988
Query: 117 GLAV-GRVHATDADEGQNAVVYYSV-----------PEDIPFVVDANTGDIRTNKALDYE 164
L++ VHA D D G V YS+ P F +D TGDI T + LDYE
Sbjct: 1989 PLSIICSVHALDFDTGPYGEVTYSIVSPCLVTHGMHPYQDLFAIDPLTGDIHTEQMLDYE 2048
Query: 165 KQQLY 169
+ Y
Sbjct: 2049 SVREY 2053
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 76 IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNA 134
+ + G + V + + D ND P F Y+ SV EGQ + V +V ATD D+G N+
Sbjct: 1421 LAESNGHQAFTQVTVAIQDWNDNPPRFAQSVYQASVSEGQFYSVHVIQVSATDLDQGLNS 1480
Query: 135 VVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ YS+ + F +D G I TN LDYE Y
Sbjct: 1481 QIEYSIVSGNQAGAFRIDELNGVILTNSILDYESSGSY 1518
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 84/201 (41%), Gaps = 62/201 (30%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ 77
LGV + ++ A D DSGK G + Y LL + +F ++P T EHQG Q
Sbjct: 261 LGV-IGKMTAIDADSGKNGQLSYFLLTD----GKFFKMNPNTGELINWLALDREHQGHHQ 315
Query: 78 ------DEGGLSSTAT--VNIRVTDINDKNPEF-QSLP---YEFSVPEGQDGLAVGRVHA 125
D G AT V + +TDIND P F Q LP + F V L+ GRV
Sbjct: 316 ITVLVTDHGSPPRNATMLVYVTITDINDNWPFFPQCLPGKEFHFKVIP----LSKGRVLM 371
Query: 126 TD-------------------------ADEGQNAVVYYSVP---EDIPFVVDANTGDIRT 157
+ + +++S+ +D F +D++TGD+
Sbjct: 372 SQNIRHLVIPENTKPSKIMSLMKSPDPLQQDHGGKLHFSIAAEDKDDHFEIDSSTGDLFL 431
Query: 158 NKALDYEKQQLYLERVFLISK 178
K LDYE YL RV ISK
Sbjct: 432 TKELDYEMTSHYLIRV--ISK 450
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 76/174 (43%), Gaps = 27/174 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA-------------SYFN 65
Y A + V ++QV ATD D G +EY ++ N A S +
Sbjct: 1452 YQASVSEGQFYSVHVIQVSATDLDQGLNSQIEYSIVSGNQAGAFRIDELNGVILTNSILD 1511
Query: 66 LDPATEHQGPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYE-FSVPEGQ-DGLA 119
+ + + +Q D G LS TA V I+VTDIND P F LP E + E G+
Sbjct: 1512 YESSGSYSLIVQATDRGVPRLSGTALVKIQVTDINDNAPVF--LPSEAVEIAENSLPGVI 1569
Query: 120 VGRVHATDADEGQNAVVYYSVPED----IPFVVDANTGDIRTNKALDYEKQQLY 169
V RV DAD N +S+ ++ F + +TG + + LD+E+ Y
Sbjct: 1570 VARVSVHDAD--LNPAFTFSLVKESSSAAKFAISQDTGVVVLAQTLDFEEVTEY 1621
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 59/123 (47%), Gaps = 10/123 (8%)
Query: 47 GLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLP 106
LV LD +AS+ + A++H P LSST+ + I + DIND P F S
Sbjct: 1821 ALVLLHALDREA-SASHKLVILASDHSCP-----PLSSTSVIAIDILDINDNAPTFSSRR 1874
Query: 107 YEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALD 162
Y+ V E G + V A D D+G +A + Y + E F ++ TG + K LD
Sbjct: 1875 YQAHVKESTPVGSHITMVSADDPDKGSHAEIIYGIISGNEKEHFYLEDRTGVLYLVKPLD 1934
Query: 163 YEK 165
YE+
Sbjct: 1935 YEE 1937
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---P 141
T + + D+ND +P F S P + + + G V R+ A D D N V YS+
Sbjct: 571 TLVAEVVILDVNDHSPTFVSYPITYVREDAEVGAVVHRITAQDPDAEMNGEVAYSILSGN 630
Query: 142 EDIPFVVDANTGDIRTNKALDY 163
ED+ FV+D+++G + ++ + +
Sbjct: 631 EDMVFVLDSSSGRVLMSQNIRH 652
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV-- 140
S+ VNI V D+ND PEF + E + + G A+ HA D D G N +V YS+
Sbjct: 17 SSTEVNITVMDVNDNRPEFPTASDEIRISQTTPPGTALYLAHAQDRDSGLNGLVRYSIAS 76
Query: 141 PEDIPFVVDANTGDIRTNKAL 161
P+ F +D G + ++L
Sbjct: 77 PQPSEFSMDQGRGVLYLRESL 97
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 73/176 (41%), Gaps = 27/176 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLD------NNTDAASYFNLDPAT---------------E 71
+ V A D D+G +G V Y ++ F +DP T E
Sbjct: 1993 ICSVHALDFDTGPYGEVTYSIVSPCLVTHGMHPYQDLFAIDPLTGDIHTEQMLDYESVRE 2052
Query: 72 HQGPIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDA 128
+ +Q D G S++ V + V I++ P F Y FS+ E GQ +GRV A+DA
Sbjct: 2053 YCLLVQAKDRGDASASLEVWVEVEGIDEFEPIFTQDQYFFSLREKGQGQQLIGRVEASDA 2112
Query: 129 DEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATS 182
D G + V YS+ P + F V+ G+I +A QL E + A S
Sbjct: 2113 DAGVDGEVLYSLRTPSTV-FSVNKTNGNIYWVRAPLLGSSQLVKEDTLEVKIIAHS 2167
Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 66/156 (42%), Gaps = 26/156 (16%)
Query: 23 ARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL 82
R+ E+G + ++ A D D+ G V Y +L N D F LD ++ G +
Sbjct: 596 VREDAEVGAVVHRITAQDPDAEMNGEVAYSILSGNEDMV--FVLDSSS---------GRV 644
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE 142
+ + V N K + SL P+ G++H + A E +
Sbjct: 645 LMSQNIRHLVIPENTKPSKIMSL---MKSPDPLQQDHGGKLHFSIAAEDK---------- 691
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
D F +D++TGD+ K LDYE YL RV ISK
Sbjct: 692 DDHFEIDSSTGDLFLTKELDYEMTSHYLIRV--ISK 725
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV-GRVHATDADEGQNAVVYYSVPED 143
+ +V + V D ND +P F +V E L V G++ A DAD G+N + Y + D
Sbjct: 228 STSVIVHVLDENDHSPAFLQNRVFLNVEESPIPLGVIGKMTAIDADSGKNGQLSYFLLTD 287
Query: 144 IPFV-VDANTGDIRTNKALDYEKQ 166
F ++ NTG++ ALD E Q
Sbjct: 288 GKFFKMNPNTGELINWLALDREHQ 311
>gi|395839907|ref|XP_003792813.1| PREDICTED: protocadherin Fat 1 [Otolemur garnettii]
Length = 4588
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 71/132 (53%), Gaps = 17/132 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI-- 76
L +++VKATD+DSG +G + Y ++++ Y N LD T + I
Sbjct: 2507 LHTLVIEVKATDEDSGIYGQITYHIVNDFAKERFYTNEQGQVFTLEKLDRETPAEKVIPV 2566
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEG 131
+D GG + T+NI +TD ND P+F++ YE ++ G G ++ +V A+DADEG
Sbjct: 2567 RLMAKDTGGKVAFCTINIILTDDNDNAPQFRATKYEVNIGSGAAKGASIIKVLASDADEG 2626
Query: 132 QNAVVYYSVPED 143
NA V Y++ D
Sbjct: 2627 SNADVTYAIEAD 2638
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 72/160 (45%), Gaps = 23/160 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG---- 74
G +MQ+ ATD D + Y L + A F L+P T EHQ
Sbjct: 3039 GKLVMQISATDADIRSNAEITYTLFGS---GAEKFKLNPDTGELKILTALDREHQAVYNL 3095
Query: 75 --PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D GG A + + + D+ND PEF + PY +V E + G + RV ATDAD G
Sbjct: 3096 LVKATDGGGRFCEANIVLTLEDVNDNPPEFTADPYTIAVFENTEPGTPLTRVQATDADAG 3155
Query: 132 QNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
N + Y + D F ++ +G I+ K LD E Q +Y
Sbjct: 3156 LNQKISYLLMNSADGQFSINELSGIIQLEKPLDRELQAVY 3195
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 86/176 (48%), Gaps = 29/176 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
++ ++ DK E+ ++QV+ATDKD G G V Y +L +TD F++D T
Sbjct: 827 YFVEVSEDK-EVNSEIIQVEATDKDLGPNGHVTYSIL-TDTDK---FSIDSVTGVVKIIH 881
Query: 71 --------------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
E + ++E L ST + + + D+ND P F Y V E
Sbjct: 882 TLDREVQPVHYLKIEARDQAREEPQLFSTVLLKVSLEDVNDNPPVFIPPSYRVKVREDLP 941
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
+G + + A D D GQ++ V YS+ + + F VD +G +R + LD+EK+Q+Y
Sbjct: 942 EGTIIMWLEAHDPDLGQSSQVRYSLMDHGEGGFDVDKLSGAVRIVQQLDFEKKQVY 997
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 25/169 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--------TDAASYF---NLD 67
YGA + +G ++QV A +D + Y ++ N + + F NLD
Sbjct: 3235 YGATVSEDILIGTEVLQVYAASRDIEANAEITYLIISGNEHGKFSIDSKTGAIFIIENLD 3294
Query: 68 PATEHQGPIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--- 118
+ H+ + E GG LS ATVNI VTDIND P F Y + E D +
Sbjct: 3295 YESSHEYYLTVEATDGGTPSLSDVATVNINVTDINDNTPVFSQDTYTTVISE--DAILEQ 3352
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
+V V A DAD N+ + YS+ + PF +D+ G+++ + LD E
Sbjct: 3353 SVITVMADDADGPSNSHIRYSIIDGNQGNPFTIDSVKGEVKVTRLLDRE 3401
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 14/146 (9%)
Query: 35 QVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTD 94
+V D+ SG+ L + LD+ T F++ H ++ + ++ V+I+V D
Sbjct: 2749 EVFVIDRQSGRLKL--EKGLDHETTKWYQFSILARCTH-----NDNEIVASVEVSIQVKD 2801
Query: 95 INDKNPEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAVVYYSV----PEDI--PFV 147
ND +P +S PYE F V G V ++ A+D D G N V YS+ E++ F
Sbjct: 2802 ANDNSPVLESNPYEAFVVENLPGGSRVIQIRASDLDSGTNGQVTYSLDLSQSEEVIESFT 2861
Query: 148 VDANTGDIRTNKALDYEKQQLYLERV 173
++ TG I T K LD+EK+ Y +V
Sbjct: 2862 INKETGWITTLKELDHEKRANYQIKV 2887
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 59/144 (40%), Gaps = 2/144 (1%)
Query: 37 KATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIN 96
KA + G F + R NT + D T ++ + V ++V D N
Sbjct: 85 KAEEYILGDFCFLRIRTKGGNTAILNREVKDHYTLVVKAVEKNTNSEARTKVRVQVLDTN 144
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGD 154
D P F Y S+PE ++ RV ATDAD G N YYS + F V +G
Sbjct: 145 DLRPLFSPTSYSISLPENTAIRTSIARVSATDADIGTNGEFYYSFKDRTDMFAVHPTSGV 204
Query: 155 IRTNKALDYEKQQLYLERVFLISK 178
+ LDY + QLY V + +
Sbjct: 205 VVLTGKLDYIETQLYEMEVLAVDR 228
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 23/160 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++ V+ATD DS + Y + N++ + +F++D +T
Sbjct: 2288 YAATLSEASVIGTSVVHVRATDSDSEPNRGISYHMFGNHSKSHDHFHIDSSTGLISLVRT 2347
Query: 71 -------EHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
+H+ ++ +GG LSS V + VTD+ND P F YE + E G
Sbjct: 2348 LDFEQSQQHKIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFDRQIYEAKISEHAAPGQ 2407
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
V + A DAD + YS+ + FV+D+ TG I
Sbjct: 2408 FVTCMKAYDADSSDIDKLEYSILSGNDHKTFVIDSETGII 2447
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 72/162 (44%), Gaps = 28/162 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASY--FNLDPATE-------------HQGPI- 76
++Q+ A DKD K L+ L ++ D S F LDPAT HQ +
Sbjct: 1475 ILQISAVDKDE-KNKLI--YTLQSSIDPLSLKKFRLDPATGSLYTSEKLDHEAIHQHILT 1531
Query: 77 -----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
QD + A + + V+D+ND P F S YE V E G V ++ A D D+
Sbjct: 1532 VMVRDQDVPVKRNFARIVVNVSDMNDHAPWFTSSSYEGRVYESAAVGSVVLQITALDKDK 1591
Query: 131 GQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
G+NA V YS+ F +D G I+T K LD Q Y
Sbjct: 1592 GENAEVLYSIESGNIGNSFTIDPILGSIKTAKELDRSNQVEY 1633
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 19/170 (11%)
Query: 23 ARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQGPIQDEG- 80
++ H +G +++ + ATD D+G G + Y + N D++ +++ + P+ E
Sbjct: 726 VKENHPMGSSVIFMNATDLDTGFNGKLVYAISGGNEDSSFIIDMETGMLKVFSPLDRETK 785
Query: 81 ------------GLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVH 124
G+ AT +++ V D ND PEF Y V E ++ + +V
Sbjct: 786 DRYSLNITVYDLGIPQKATWHLLDLIVLDANDNPPEFLQESYFVEVSEDKEVNSEIIQVE 845
Query: 125 ATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYLERV 173
ATD D G N V YS+ D F +D+ TG ++ LD E Q ++ ++
Sbjct: 846 ATDKDLGPNGHVTYSILTDTDKFSIDSVTGVVKIIHTLDREVQPVHYLKI 895
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVY 137
+G SS A V ++V D ND +P + Y ++PE G V ++ ATDAD NA +
Sbjct: 3000 DGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPEDALPGKLVMQISATDADIRSNAEIT 3059
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ F ++ +TG+++ ALD E Q +Y
Sbjct: 3060 YTLFGSGAEKFKLNPDTGELKILTALDREHQAVY 3093
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 23/180 (12%)
Query: 11 EMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT 70
E T+D Y + E G L +V+ATD D+G + Y L+++ S L
Sbjct: 3124 EFTADP--YTIAVFENTEPGTPLTRVQATDADAGLNQKISYLLMNSADGQFSINELSGII 3181
Query: 71 EHQGPIQ--------------DEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
+ + P+ D+G L++T++V + V DIND P F+ Y +V E
Sbjct: 3182 QLEKPLDRELQAVYTLTVKAVDQGLPRRLTATSSVIVSVLDINDNPPVFEYREYGATVSE 3241
Query: 114 G-QDGLAVGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G V +V+A D NA + Y S E F +D+ TG I + LDYE Y
Sbjct: 3242 DILIGTEVLQVYAASRDIEANAEITYLIISGNEHGKFSIDSKTGAIFIIENLDYESSHEY 3301
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE 142
++ V +++ N PEF Y+ S E G + V A D DEG+N V YS+
Sbjct: 445 ASTKVLVKILGANSNPPEFSQTAYKASFDENVPIGTTIMSVSAEDPDEGENGYVTYSIAN 504
Query: 143 --DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSY 183
+PFV+D TG + ++ LDYE + RV+ + A+ +
Sbjct: 505 LNHVPFVIDHFTGAVSISENLDYE----LMPRVYSLRIRASDW 543
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 36/173 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLDP-------------------- 68
G ++Q++A+D DSG G V Y L L + + F ++
Sbjct: 2825 GSRVIQIRASDLDSGTNGQVTYSLDLSQSEEVIESFTINKETGWITTLKELDHEKRANYQ 2884
Query: 69 ----ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRV 123
A++H +Q LSSTA V++ +TD+ND P F + Y+ +V E G + +
Sbjct: 2885 IKVVASDHGEKVQ----LSSTAVVDVTITDVNDSPPRFTAEIYKGTVSEDDPPGGVIAIL 2940
Query: 124 HATDAD--EGQNAVVYYSVPEDI--PFVVD--ANTGDIRTNKALDYEKQQLYL 170
TDAD E V Y+ D F ++ N + K LD E++ YL
Sbjct: 2941 STTDADSEEINRQVTYFITGGDALRQFAIENIQNEWKVYVKKPLDREQKDNYL 2993
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR--------VHATDADEG 131
GLS+ TV + + D ND P F Y + E +V + ATD+D+
Sbjct: 1743 AGLSTNTTVLVHLQDENDNLPVFMQAEYTGLISESASINSVVLTDRNVPLVIRATDSDKE 1802
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
NA++ Y + E F +D+NTG I T +LDYE+ ++
Sbjct: 1803 SNALLVYHIVEPSVHKYFAIDSNTGAIHTVLSLDYEETSIF 1843
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 40/181 (22%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH 72
TS+ ++Y + + + V+++Q++A D DS + Y++ N +F++ P T
Sbjct: 1139 TSEPVYYPEVMENSPK-DVSVVQIEAFDPDSSSNDKLMYKITSGNPQG--FFSIHPKT-- 1193
Query: 73 QGPI-----------QDEGGLSSTATVN------------IRVTDINDKNPEFQSLPYEF 109
G I QDE L T T N +++ D ND P+F Y+
Sbjct: 1194 -GLITTTSRKLDREQQDEHILEVTVTDNGSPPKSTITRVIVKILDENDNKPQFLQKFYKI 1252
Query: 110 SVPEGQD--------GLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTN 158
+PE + + RV ATD DEG NA + YS+ E F ++ TG + +
Sbjct: 1253 RLPEREKPDRERNAKREPLYRVIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTGVVSSK 1312
Query: 159 K 159
K
Sbjct: 1313 K 1313
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 30/184 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN------------------- 56
S + ++ LG ++M V A D+D+G+ G + Y + D
Sbjct: 1036 SFVEKGIVKEDVPLGSSVMTVSAHDEDTGRDGEIRYSIRDGSGIGVFKIDEETGVIETCD 1095
Query: 57 --NTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
+ ++ S++ L QG + LSS V I V D+ND P+ Y V E
Sbjct: 1096 RLDRESTSHYWLTVYAADQGVVP----LSSFIEVYIEVEDVNDNAPQTSEPVYYPEVMEN 1151
Query: 115 Q-DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDI-RTNKALDYEKQQLY 169
++V ++ A D D N + Y + P F + TG I T++ LD E+Q +
Sbjct: 1152 SPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEH 1211
Query: 170 LERV 173
+ V
Sbjct: 1212 ILEV 1215
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 73/174 (41%), Gaps = 26/174 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
+L Y A+ + E+ + V A D+DSGK G V Y L +++ +F + P+ E
Sbjct: 2083 NLPYYAVVKVDTEVDHVIRYVTAVDRDSGKNGEVHYYLKEHH----EHFQVGPSGEISLK 2138
Query: 76 IQ-----------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
Q D G + +A V + +T +N P F+ Y + E +
Sbjct: 2139 KQFELDTLNKEYLITVVAKDGGNPAFSAEVIVPITVVNKAMPVFEQTFYSAEIVENVQ-M 2197
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
VH A+ + V+YS+ + P F ++ NTG I LD+E Y
Sbjct: 2198 HSPVVHV-QANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAPLDFESHPAY 2250
Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G + V+I V DIND P F Y ++ E G +V V ATD+D N + Y
Sbjct: 2262 GAHAEVFVDIVVEDINDNPPVFAHQSYAATLSEASVIGTSVVHVRATDSDSEPNRGISYH 2321
Query: 140 V-----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
+ F +D++TG I + LD+E+ Q + ++F+
Sbjct: 2322 MFGNHSKSHDHFHIDSSTGLISLVRTLDFEQSQQH--KIFV 2360
Score = 38.9 bits (89), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVY 137
+G + V I+V D ND P+F + YE ++PE + ++ A D DE +N ++Y
Sbjct: 1433 DGTTTILTQVFIKVIDTNDHRPQFATSKYEVTIPEDTVPETEILQISAVDKDE-KNKLIY 1491
Query: 138 YSVPEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERVFL 175
P F +D TG + T++ LD+E ++ V +
Sbjct: 1492 TLQSSIDPLSLKKFRLDPATGSLYTSEKLDHEAIHQHILTVMV 1534
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 12/137 (8%)
Query: 42 DSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPE 101
DS K + RLLD T + + A+++ P + +T TVNI V+D+ND P
Sbjct: 3386 DSVKGEVKVTRLLDRETISGYTLTVQ-ASDNGSPPR-----VNTTTVNIDVSDVNDNAPA 3439
Query: 102 FQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIR 156
F Y V E + G +V ++ TD D N ++ S ED F VD G +
Sbjct: 3440 FSQENYSLIVQENKPVGFSVLQLVVTDKDSSHNGPPFFFTIVSGNEDKAFEVDQQ-GVLL 3498
Query: 157 TNKALDYEKQQLYLERV 173
T+ A+ + + YL V
Sbjct: 3499 TSGAIKRKVKDHYLLHV 3515
Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 27/137 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYF-NLD- 67
Y A + +G T+M V A D D G+ G V Y + +D+ T A S NLD
Sbjct: 468 YKASFDENVPIGTTIMSVSAEDPDEGENGYVTYSIANLNHVPFVIDHFTGAVSISENLDY 527
Query: 68 -----------PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
A++ P + E + +T T+N ++ND P F+ + E ++P
Sbjct: 528 ELMPRVYSLRIRASDWGLPYRREVEVLATITLN----NLNDNTPLFEKINCEGTIPRDLG 583
Query: 117 -GLAVGRVHATDADEGQ 132
G + V A DADE Q
Sbjct: 584 VGEQITTVSAIDADELQ 600
>gi|380798587|gb|AFE71169.1| protocadherin-20, partial [Macaca mulatta]
Length = 658
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 78/159 (49%), Gaps = 26/159 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQGPIQ 77
L ++ ATD DSG+ G V Y L DA SYF+LD T ++ ++
Sbjct: 261 LTKLYATDADSGERGQVSYFL---GPDAPSYFSLDSVTGILTVSTQLDREEKERYRYTVR 317
Query: 78 D-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQ 132
+GG S ATV + V D ND +P F + + F VPE G +G + TDAD G+
Sbjct: 318 AVDGGKPPRESVATVALTVLDKNDNSPRFINKDFSFFVPENFPGYGEIGVISVTDADAGR 377
Query: 133 NAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
N V SV DI FV+D G +R +LD E+Q Y
Sbjct: 378 NGWVALSVVNQSDI-FVIDTGKGMLRAKVSLDREQQSSY 415
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 51/106 (48%), Gaps = 14/106 (13%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLP-----YEFSVPEGQDGLAVGRVHATDADEGQN 133
E LSSTA + I + DIND NP P Y +P G V V+A D D G N
Sbjct: 426 EPALSSTAKITILLLDIND-NPPLVLFPQSNMSYLLVLPSTLPGSPVTEVYAVDKDTGMN 484
Query: 134 AVVYYSV-----PEDIPFVVDANTGDIRTNKAL---DYEKQQLYLE 171
AV+ YS+ P F +D TG+I +AL DY +L ++
Sbjct: 485 AVIAYSIIGRRGPRPESFRIDPKTGNITLEEALLQTDYGLHRLLVK 530
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEGQNAVVYYSV 140
L +AT+ I ++DIND P F +V G + V A D D G NA + YS
Sbjct: 7 LLGSATLTIGISDINDNCPLFTDSQINVTVYGNATVGTPIAAVQAVDKDLGTNAQITYSY 66
Query: 141 PEDIP------FVVDANTGDIR 156
+ +P F +D NTG I+
Sbjct: 67 SQKVPQASKDLFHLDENTGVIK 88
>gi|395506139|ref|XP_003757393.1| PREDICTED: cadherin-22 [Sarcophilus harrisii]
Length = 763
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 85/184 (46%), Gaps = 37/184 (20%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD--------------------- 67
+G ++MQV A+D D +G RL+ + D +F +D
Sbjct: 180 IGTSVMQVMASDADDPTYG-SSARLVYSVLDGEQHFTVDNKTGVIRTAVADLDREKQERY 238
Query: 68 ----PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR 122
AT+ G + GGLS + TV I +TD+ND P F Y+FS+ E G A+GR
Sbjct: 239 EVVIQATDMAGQL---GGLSGSTTVTIVITDVNDNPPRFPQKMYQFSIVETAPIGTAIGR 295
Query: 123 VHATDADEGQNAVVYYSVPED-----IPFVVDANTGD--IRTNKALDYEKQQLYLERVFL 175
V A D+D G+N + Y + ++ D+NT + I K LD+E Q + +
Sbjct: 296 VKAEDSDVGENTDMTYQLKDEGGGDMFKVTTDSNTQEAIITVQKCLDFEAQATHTVVLEA 355
Query: 176 ISKF 179
++KF
Sbjct: 356 LNKF 359
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPE-DI 144
I+V DIND P F PY SV E G +V +V A+DAD+ G +A + YSV + +
Sbjct: 153 IKVQDINDSEPRFLQGPYIGSVAELSPIGTSVMQVMASDADDPTYGSSARLVYSVLDGEQ 212
Query: 145 PFVVDANTGDIRTNKA-LDYEKQQLY 169
F VD TG IRT A LD EKQ+ Y
Sbjct: 213 HFTVDNKTGVIRTAVADLDREKQERY 238
Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 9/145 (6%)
Query: 26 KHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP-IQDEGGLSS 84
K E G + +V TD ++ + + + LD A L+ + P D G
Sbjct: 314 KDEGGGDMFKV-TTDSNTQEAIITVQKCLDFEAQATHTVVLEALNKFVDPRFVDLGTFRD 372
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPED 143
A V + V D+ D+ PEF+ V E Q G VG + A D D N V Y++ D
Sbjct: 373 QAIVRVTVMDV-DEPPEFRPPSGLMEVQEDAQIGSVVGVITALDPD-AANRPVRYAIDRD 430
Query: 144 IP----FVVDANTGDIRTNKALDYE 164
F +DA+TG I T K LD E
Sbjct: 431 SDLEQIFNIDADTGAIVTGKGLDRE 455
>gi|355701022|gb|EHH29043.1| Protocadherin-13 [Macaca mulatta]
Length = 952
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 78/159 (49%), Gaps = 26/159 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQGPIQ 77
L ++ ATD DSG+ G V Y L DA SYF+LD T ++ ++
Sbjct: 555 LTKLYATDADSGERGQVSYFL---GPDAPSYFSLDSVTGILTVSTQLDREEKERYRYTVR 611
Query: 78 D-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQ 132
+GG S ATV + V D ND +P F + + F VPE G +G + TDAD G+
Sbjct: 612 AVDGGKPPRESVATVALTVLDKNDNSPRFINKDFSFFVPENFPGYGEIGVISVTDADAGR 671
Query: 133 NAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
N V SV DI FV+D G +R +LD E+Q Y
Sbjct: 672 NGWVALSVVNQSDI-FVIDTGKGMLRAKVSLDREQQSSY 709
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 51/106 (48%), Gaps = 14/106 (13%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLP-----YEFSVPEGQDGLAVGRVHATDADEGQN 133
E LSSTA + I + DIND NP P Y +P G V V+A D D G N
Sbjct: 720 EPALSSTAKITILLLDIND-NPPLVLFPQSNMSYLLVLPSTLPGSPVTEVYAVDKDTGMN 778
Query: 134 AVVYYSV-----PEDIPFVVDANTGDIRTNKAL---DYEKQQLYLE 171
AV+ YS+ P F +D TG+I +AL DY +L ++
Sbjct: 779 AVIAYSIIGRRGPRPESFRIDPKTGNITLEEALLQTDYGLHRLLVK 824
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 63/148 (42%), Gaps = 29/148 (19%)
Query: 38 ATDKDSGKFGLVEYRLLD------------NNTDAASYF----NLDPATEHQGP---IQD 78
A D D G G+ YRLLD N + Y LD T+ Q I +
Sbjct: 235 AVDPDVGINGVQTYRLLDYHGMFTLDVEENENGERTPYLIVMGALDRETQDQYVSIIIAE 294
Query: 79 EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEGQNA 134
+GG L +AT+ I ++DIND P F +V G + V A D D G NA
Sbjct: 295 DGGSPPLLGSATLTIGISDINDNCPLFTDSQINVTVYGNATVGTPIAAVQAVDKDLGTNA 354
Query: 135 VVYYSVPEDIP------FVVDANTGDIR 156
+ YS + +P F +D NTG I+
Sbjct: 355 QITYSYSQKVPQASKDLFHLDENTGVIK 382
>gi|195401052|ref|XP_002059128.1| GJ16197 [Drosophila virilis]
gi|194156002|gb|EDW71186.1| GJ16197 [Drosophila virilis]
Length = 5168
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEY------RLLDNNTDAASY-FNLDPATEHQGPIQDEGG 81
+ + VKA D D G+ G ++Y RL D+N A F L+P +D G
Sbjct: 2208 INTVVFTVKAIDNDEGRNGYIDYYLDDKSRLSDDNGSAEPLPFTLNPTDA-----RDRGD 2262
Query: 82 --LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY 138
L++ + + I++ D+ND P F Y SV E G V +V ATD DEG N V Y
Sbjct: 2263 PPLATQSQLTIKILDVNDNIPVFDPKQYSASVAENASIGAMVLQVSATDMDEGDNGRVRY 2322
Query: 139 SV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
S+ ++ F + +TG +R K L+YE++ Y+
Sbjct: 2323 SIVSGDQNRDFSISEDTGIVRVAKNLNYERKARYI 2357
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 85/178 (47%), Gaps = 32/178 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-- 76
Y + + +G T++ V ATDKD+G G++ Y + N +YFN++ E G I
Sbjct: 3242 YQVIVPENEPIGTTIITVSATDKDTGPNGMLHYAISGGN--ERNYFNVN---ERTGAIII 3296
Query: 77 ------------------QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+D G L++ A + I +TD+ND P F Y + E +
Sbjct: 3297 MQPLDYDLMQEYHLNISVKDLGYKALTALAMLTIILTDVNDNPPVFNQSEYHGYIAENKP 3356
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G AV + HATD D +NA+++YS + F ++ + G I + + DYE+++ Y
Sbjct: 3357 VGTAVFQAHATDKDSPKNAIIHYSFLARGTDHHFFSINVSNGTILSTASFDYEERRSY 3414
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 28/183 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA------ 69
S ++G +A +K +G + Q ATDKDS K ++ Y L TD +F+++ +
Sbjct: 3345 SEYHGYIAENK-PVGTAVFQAHATDKDSPKNAIIHYSFLARGTDH-HFFSINVSNGTILS 3402
Query: 70 ------------TEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD- 116
T H + + S A + + V +N+ P+F + F V E
Sbjct: 3403 TASFDYEERRSYTLHIKAKNPDSSMESYAVLYVHVLGVNEFYPQFVQSAFHFDVSETSSV 3462
Query: 117 GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
G AVG V ATD D G++ +YY + D F ++ NTG I + LD E Q RV
Sbjct: 3463 GTAVGSVQATDKDIGEDGRIYYLLVGSSNDKGFGINTNTGLIYVTRNLDRETQN----RV 3518
Query: 174 FLI 176
L+
Sbjct: 3519 VLM 3521
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 22/184 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-----NTDAASYFNLDPATEH 72
Y + E+G ++ V ++D D G+ Y +N D+ S N+ A +
Sbjct: 2923 LYSLNVTENAEIGSFVICVTSSDLDLGENANATYSFSENPGKKFKIDSQS-GNITVAGQI 2981
Query: 73 QGPIQDE---------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGR 122
QDE G + + I + D ND PEF+ Y F+ PE Q +A VG+
Sbjct: 2982 DREQQDEYILKVVASDGAWRAETPITITIQDQNDNAPEFEHSFYSFNFPELQHAVAFVGQ 3041
Query: 123 VHATDAD-EGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYL---ERVFLIS 177
+ ATD D +G N+V+ YS+ P F VD TG+I + + Y+ Q Y+ E +F ++
Sbjct: 3042 IIATDRDKQGPNSVISYSLQSPSPIFSVDPATGEIFSKTQIQYKHSQ-YISSPENMFALT 3100
Query: 178 KFAT 181
AT
Sbjct: 3101 ILAT 3104
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 74/162 (45%), Gaps = 23/162 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQ 73
+G T+ ++ATD D + + L+ N D F L+P+T ++
Sbjct: 1861 IGHTIATIRATDPDPDIMSSMVFTLI-NGHDGK--FILEPSTGKLQLRDSLDREAKDKYN 1917
Query: 74 GPIQDEGGLSSTAT-VNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEG 131
I+ G+ T T + I+V D ND P F+ Y F +PE G VG + A DAD
Sbjct: 1918 MRIRVSDGVQYTETDIIIQVDDTNDNPPVFEESVYSFDIPENAPRGYQVGEIVAKDADLA 1977
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYL 170
QNA V Y+V D F ++ TG + LDYE Q Y+
Sbjct: 1978 QNAQVSYAVVSDWANDVFSLNPQTGALTLTAKLDYEDVQHYI 2019
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 70/159 (44%), Gaps = 26/159 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----EHQGPIQDE----- 79
G +M + D D G G V Y L+ N A+ F LD AT H+ + +
Sbjct: 1301 GTHIMHIFTKDADEGLNGDVYYTLVAGN--EANLFGLDSATGLLILAHRLDRESQEIHRL 1358
Query: 80 ----------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDA 128
L+S+ + I V D ND PEF E SV E G + R A+DA
Sbjct: 1359 TVVARDAAIKNSLTSSVNITITVLDDNDNAPEFTQSSSEISVLETSPSGTELMRFRASDA 1418
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYE 164
D+G N+ V +S+ F +D+ +G + +K LDYE
Sbjct: 1419 DQGMNSQVVFSITAGNRRDTFHIDSVSGSLYLHKPLDYE 1457
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 19/177 (10%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD--NNT----DAASYFNL-- 66
+ L Y A ++ ++ +KA D+DSG+ G V YRL + N T D+ +
Sbjct: 2818 EKLIYNAEIMEEETPPQLIVAIKAKDRDSGENGEVSYRLKNDYNGTFEIVDSGEIYTTMR 2877
Query: 67 -------DPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
D A + Q L+ TA+V + + D ND P+F L Y +V E + G
Sbjct: 2878 LDREEFSDYALVVEAVDQGVPQLTGTASVLLHLLDKNDNPPKFTRL-YSLNVTENAEIGS 2936
Query: 119 AVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V V ++D D G+NA YS E+ F +D+ +G+I +D E+Q Y+ +V
Sbjct: 2937 FVICVTSSDLDLGENANATYSFSENPGKKFKIDSQSGNITVAGQIDREQQDEYILKV 2993
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 79/186 (42%), Gaps = 30/186 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE---HQGP 75
Y A+ + G + + ATD+D+G V Y +L N +FN+D T GP
Sbjct: 513 YTAVLSELAPTGTFVTSIVATDEDTGVNAQVFYEILTGN--ELKWFNIDTTTGLIVTTGP 570
Query: 76 IQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEG-QDGL 118
+ E S +++ R + D ND+ P F S+ EG
Sbjct: 571 LDREVQASVELSISARDGGPNPKFAYTQLKVTILDENDEAPHFGQQELNVSLSEGVSPPT 630
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLER 172
V + ATD D+G N V +S+ + F +D+ TG + T KALD E Y
Sbjct: 631 IVALLSATDNDQGTNGSVTFSLAPSVERLYPQQFAIDSITGQLMTRKALDRETMANY--E 688
Query: 173 VFLISK 178
+F+I++
Sbjct: 689 IFVIAR 694
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV 140
L V + +TD+ND PEF PY+ ++ E +G + + DADEG N VYY++
Sbjct: 1265 LHDKVKVKVIITDVNDNAPEFLRTPYQVTISEDAPEGTHIMHIFTKDADEGLNGDVYYTL 1324
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
E F +D+ TG + LD E Q+++ R+ ++++ A
Sbjct: 1325 VAGNEANLFGLDSATGLLILAHRLDRESQEIH--RLTVVARDA 1365
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 79/170 (46%), Gaps = 32/170 (18%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI- 76
+Y A ++ +G +++ ATDKD+G G + + LL + S+F++D T G I
Sbjct: 2502 YYHASIQENLPVGSLVLKPVATDKDTGLNGKLRFDLLGEH---MSHFHIDTDT---GEIT 2555
Query: 77 -------------------QDEGGLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEG 114
QD + AT + I+V D ND P+F++ + VP
Sbjct: 2556 TAAVLDRESIAVYQLTLMAQDSSIIEPRATSVNLTIKVGDTNDNVPKFEANNFNIVVPNN 2615
Query: 115 -QDGLAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKAL 161
+ G V ATD DEG+NA+V Y++ + F V +TG IRT L
Sbjct: 2616 IRAGEFVFGARATDLDEGENAMVVYNINGKDQHIFEVHPSTGVIRTKMEL 2665
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 18/155 (11%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEG------- 80
++ + A+D D G G + Y ++D N+D D + P+ E
Sbjct: 1070 KVNTRFFALAASDSDLGPNGRIAYEIIDGNSDRKFGVFPDGFLFVRAPLDREERDYYALT 1129
Query: 81 ---------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG-LAVGRVHATDADE 130
SS V I V D ND P+F + + F++PE VG++ A D D
Sbjct: 1130 ISCSDAGTPSRSSVVPVVIHVIDENDNPPQFTNSTFTFNIPENAPANTFVGKLTAVDRDI 1189
Query: 131 GQNAVVYYSV-PEDIPFVVDANTGDIRTNKALDYE 164
G+NA + +SV + F +D + G I+T + D E
Sbjct: 1190 GRNAELSFSVLSQSQDFKIDTHNGFIKTLRPFDRE 1224
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 73/167 (43%), Gaps = 32/167 (19%)
Query: 30 GVTLMQVKATDK-DSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ----------- 77
G +++V A D D G ++Y L+ +N A YF ++ +H G +
Sbjct: 3147 GQRVVRVHANDDCDVGVNAEIDYSLISSNLSA--YFTIN---KHDGWVTLIKQIKLPANS 3201
Query: 78 ---------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHA 125
D G LS V + VTD N PEF Y+ VPE + G + V A
Sbjct: 3202 RFELNVRATDRGVPPLSDQTRVIVVVTDENRHAPEFNPRSYQVIVPENEPIGTTIITVSA 3261
Query: 126 TDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
TD D G N +++Y++ E F V+ TG I + LDY+ Q Y
Sbjct: 3262 TDKDTGPNGMLHYAISGGNERNYFNVNERTGAIIIMQPLDYDLMQEY 3308
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQN 133
QD G LS+T TV V D+ND P F + Y + E G V V A D D G N
Sbjct: 2025 QDNGQPSLSTTITVYCNVLDLNDNTPLFDPMSYSSEILENVLVGKEVVTVSAKDIDSGNN 2084
Query: 134 AVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ +S+ ED F +++N G I T + LD E + Y
Sbjct: 2085 GLIEFSITAGDEDGDFWINSN-GTISTRRQLDREHRSAY 2122
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-----GLAVGRVHATDADEGQNAVVY 137
S+TATV + ++DIND +PEF Y +++ E D + V ATD D G NA++
Sbjct: 703 SATATVCLSISDINDNSPEFYPKHYIYTLKEEADVAPNSMRTLLNVTATDRDVGDNALIT 762
Query: 138 YSVPE--DIPFVVDANTG----DIRTNKALDYEKQQLYLERV 173
Y++ D F VD+ TG +R + AL K+ Y R+
Sbjct: 763 YNLESGGDNVFHVDSRTGAVIFAVRGDDALKQLKKPYYKLRI 804
Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRV----HATDADEGQNAVVY 137
LS+T V + V DIND P F+ Y S+ Q+ L VG + ATD D G N +
Sbjct: 2478 LSNTGIVRVEVQDINDNGPVFELQYYHASI---QENLPVGSLVLKPVATDKDTGLNGKLR 2534
Query: 138 YSVPED--IPFVVDANTGDIRTNKALDYEKQQLY 169
+ + + F +D +TG+I T LD E +Y
Sbjct: 2535 FDLLGEHMSHFHIDTDTGEITTAAVLDRESIAVY 2568
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 73/167 (43%), Gaps = 29/167 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDN--------NTDAASYF---NLDPATEHQ---- 73
+G + V+ATDKD G+ G + Y L+ + NT+ + NLD T+++
Sbjct: 3462 VGTAVGSVQATDKDIGEDGRIYYLLVGSSNDKGFGINTNTGLIYVTRNLDRETQNRVVLM 3521
Query: 74 ------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHAT 126
G I+ G ++ A V I + D ND PEF Y ++ E G V V A
Sbjct: 3522 VMAKNYGSIR--GNDTAEAQVTISIQDGNDP-PEFVKRYYSSTILESVPPGTMVTTVKAI 3578
Query: 127 DAD-EGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D D QN YS+ F +DA TG+I T LD E Y
Sbjct: 3579 DKDVRPQNNQFTYSIINGNIKQSFKIDAETGEISTAVLLDREDIAYY 3625
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV---PEDIP 145
I V D+ND P F+ Y + E G V + ATD D G NA V+Y + E
Sbjct: 496 IDVNDVNDHEPVFEKSEYTAVLSELAPTGTFVTSIVATDEDTGVNAQVFYEILTGNELKW 555
Query: 146 FVVDANTGDIRTNKALDYEKQ 166
F +D TG I T LD E Q
Sbjct: 556 FNIDTTTGLIVTTGPLDREVQ 576
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNA-VVYYSVPEDIP 145
VN+ + D+ND P F Y ++ E G V +V A+D D G N+ + YY +
Sbjct: 264 VNVTILDVNDNPPIFDHSDYSVTLNETVMPGSPVLQVMASDNDLGDNSKLTYYLAETEHQ 323
Query: 146 FVVDANTGDIRTNKALDYEKQ 166
F VD TG I T L+ +Q
Sbjct: 324 FTVDPETGVISTTVRLNCPQQ 344
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 57/135 (42%), Gaps = 33/135 (24%)
Query: 35 QVKATDKDS-GKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ----- 77
Q+ ATD+D G ++ Y L + F++DPAT +H I
Sbjct: 3041 QIIATDRDKQGPNSVISYSL----QSPSPIFSVDPATGEIFSKTQIQYKHSQYISSPENM 3096
Query: 78 --------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHAT 126
D G L + VNI + D N+ P+F+ Y +PE G V RVHA
Sbjct: 3097 FALTILATDNGKPPLYTECLVNINIVDANNNPPKFEHTEYLSPLPEQAGAGQRVVRVHAN 3156
Query: 127 -DADEGQNAVVYYSV 140
D D G NA + YS+
Sbjct: 3157 DDCDVGVNAEIDYSL 3171
>gi|351707599|gb|EHB10518.1| Protocadherin-23 [Heterocephalus glaber]
Length = 3020
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 84/168 (50%), Gaps = 32/168 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ 77
LGV + +V A D DSG G + Y LL + ++F ++P T EHQ Q
Sbjct: 858 LGV-IGRVTAADADSGDNGQLSYFLLSD----GAFFRMNPHTGELVSWLALDREHQMHHQ 912
Query: 78 ------DEGGLSSTAT--VNIRVTDINDKNPEF-QSLP-YEFSVPEGQD---GLAVGRVH 124
D G AT V + VTDIND +P F Q LP EF + +D + V V
Sbjct: 913 MTVLVTDHGSPPRNATMEVYVTVTDINDNSPFFPQCLPGKEFHIKVLEDQPVNMLVTTVF 972
Query: 125 ATDADEGQNAVVYYSVP-EDIP--FVVDANTGDIRTNKALDYEKQQLY 169
A D DEG NA V YSV ED F +DAN+G+IRT+ L Y ++ Y
Sbjct: 973 AKDLDEGNNAEVIYSVSSEDYSDHFKIDANSGEIRTSTILSYNYRRSY 1020
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 87/178 (48%), Gaps = 25/178 (14%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA----------- 69
A R+ +G ++ +V A D D G+ G V Y + N +AA F LD +
Sbjct: 1277 ACVREDATVGSSVHRVHARDPDEGRNGKVTYGIRSGNANAA--FMLDESSGLLTIACPLD 1334
Query: 70 ----TEHQGPI--QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAV 120
T+H + D+G SS+ T+ + V D+ND+ P F+ YE SV E Q G V
Sbjct: 1335 YEVKTQHILTLVALDDGVPARSSSQTMTVTVLDVNDEAPVFKQHLYEASVKENQSPGEFV 1394
Query: 121 GRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERVFL 175
RV ATD D G N+ + + + F ++A+TG++ T LD E Q ++ RV +
Sbjct: 1395 TRVGATDRDSGINSKLQFEIISGASFGFFKINADTGEVVTTTTLDREVQGVFTLRVLV 1452
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 74/154 (48%), Gaps = 20/154 (12%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LDPATEH------QGPIQD 78
V A+D D+G+ G V+Y +++ NTD + N LD Q Q
Sbjct: 1501 VLASDMDAGRNGAVKYHIINGNTDKSFVINETSGELATTRALDREQVRNFTLTVQCSDQG 1560
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV- 136
+ SST + +RV D ND +P F L Y+ SV E G V + A D DEG N
Sbjct: 1561 DPPQSSTIQLQVRVLDDNDHSPAFPMLHYQPSVREDAAVGTVVLVLSAVDKDEGLNGQTE 1620
Query: 137 YYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLY 169
Y+ V E F ++ TG +RT++ALD E + LY
Sbjct: 1621 YFLVGESSGAFTINPVTGTLRTSRALDREARSLY 1654
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 27/146 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD--NNTDAASYFNLDPATEHQGPI 76
Y + +G +QV+A+D D+G +G VEY L D + +A F +DP H G I
Sbjct: 328 YNVTLAEHTPVGHCFLQVQASDADAGLYGCVEYSLYDGFQSDEAPPVFQIDP---HTGQI 384
Query: 77 ---------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEG 114
+D GGLS+ A V + + D+ND +P F Y S+ +
Sbjct: 385 CVSQDLDRERDPASFDLLVTAKDGGGLSAQAFVRVDLEDVNDNHPVFNPSTYVTSISSQT 444
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV 140
Q G + +V ATD D G V Y++
Sbjct: 445 QPGAEIIKVLATDRDAGVYGTVAYAL 470
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 81/177 (45%), Gaps = 31/177 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + ++QV A+D DSG G VEY ++ N A F +D +
Sbjct: 1897 IYQASVSEGQGYNAHVIQVTASDPDSGLNGRVEYSIVSGNQGEA--FQIDALSGVLTTSA 1954
Query: 71 --EHQGP--------IQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYE-FSVPEGQ-D 116
+H+ D+G LS+TATV I+VTDIND P F LP E V E
Sbjct: 1955 LLDHESTKSYSLITQATDKGKPRLSATATVRIQVTDINDNAPAF--LPSEAVEVAENSLP 2012
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPEDI----PFVVDANTGDIRTNKALDYEKQQLY 169
G+ V RV A D D N +S +D F +D +TG + KALD+E+ Y
Sbjct: 2013 GVIVTRVSAHDVD--LNPAFIFSFAKDCNPGATFAIDQHTGVVILVKALDFEEVTKY 2067
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 75/168 (44%), Gaps = 20/168 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA-------- 69
Y A ++ G + +V ATD+DSG +++ ++ + N D
Sbjct: 1379 LYEASVKENQSPGEFVTRVGATDRDSGINSKLQFEIISGASFGFFKINADTGEVVTTTTL 1438
Query: 70 -TEHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
E QG ++DEG LS T T+ V D ND PEF V E Q+ V
Sbjct: 1439 DREVQGVFTLRVLVRDEGVPSLSCTTTILCIVEDENDHAPEFLGTSPYIEVLENQEPKVV 1498
Query: 121 GRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEK 165
V A+D D G+N V Y + D FV++ +G++ T +ALD E+
Sbjct: 1499 YTVLASDMDAGRNGAVKYHIINGNTDKSFVINETSGELATTRALDREQ 1546
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 75/184 (40%), Gaps = 30/184 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF----------- 64
SL Y A ++ G + V A+D D G + Y+++ N Y
Sbjct: 2318 SLQYHAHVKESAPPGSRITVVSASDCDMGSHAEIFYQVISGNEKEHFYLEERTGVLYLIK 2377
Query: 65 --NLDPATEHQGPIQDEGGLS---STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
+ + T+ +Q G S A V I + D ND P+F S +VPE +
Sbjct: 2378 PLDYEETTKFTLTVQASDGDKKHFSFAVVFISLLDDNDHKPQFMSSSLTCAVPENLPAFS 2437
Query: 120 -VGRVHATDADEGQNAVVYYSV------------PEDIPFVVDANTGDIRTNKALDYEKQ 166
+ VHA D D G + YSV P+D+ F +D TGDIR ++LDYE
Sbjct: 2438 SICSVHAVDFDAGPYGELTYSVLSPCLAAHERPSPQDL-FSIDPLTGDIRAKQSLDYESA 2496
Query: 167 QLYL 170
Y
Sbjct: 2497 DKYC 2500
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 31/157 (19%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAAS------YFNLDPATEHQGPIQ-------- 77
++ V A D D+G +G + Y +L A F++DP T G I+
Sbjct: 2438 SICSVHAVDFDAGPYGELTYSVLSPCLAAHERPSPQDLFSIDPLT---GDIRAKQSLDYE 2494
Query: 78 ------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVH 124
D+GG ++++T + + ++ P F Y FS+PE Q+ +GRV
Sbjct: 2495 SADKYCLVVQARDKGGSTASSTAWVYIEGTDEFEPVFTQDQYFFSLPEKTQERQLIGRVE 2554
Query: 125 ATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKA 160
A+DAD G + V++YS+ PF V+ G+I KA
Sbjct: 2555 ASDADAGADGVIFYSLATPSPFFSVNRTNGNIYWLKA 2591
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV 140
LSST V+I+V D++D P F SL Y V E G + V A+D D G +A ++Y V
Sbjct: 2296 LSSTVIVSIQVLDVDDNPPRFSSLQYHAHVKESAPPGSRITVVSASDCDMGSHAEIFYQV 2355
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEK 165
E F ++ TG + K LDYE+
Sbjct: 2356 ISGNEKEHFYLEERTGVLYLIKPLDYEE 2383
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE 142
S + + + D+ND +P F S P + G +V RVHA D DEG+N V Y +
Sbjct: 1252 SRSQIARVAILDVNDHSPAFVSSPVACVREDATVGSSVHRVHARDPDEGRNGKVTYGIRS 1311
Query: 143 ---DIPFVVDANTGDIRTNKALDYE-KQQLYLERVFL 175
+ F++D ++G + LDYE K Q L V L
Sbjct: 1312 GNANAAFMLDESSGLLTIACPLDYEVKTQHILTLVAL 1348
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 81/185 (43%), Gaps = 31/185 (16%)
Query: 10 LEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA 69
L+++ Y + + E G +++ V A D+ + +++Y + N D F+LD
Sbjct: 1786 LKISFSQHLYRGLVTENCEAGTSVVTVNAFVSDAVR-DIIKYSVFSGNKDGV--FSLD-- 1840
Query: 70 TEHQGPIQ---------------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYE 108
H G + + + + V + + D+ND P F+ Y+
Sbjct: 1841 -SHSGQLTVKEPEFLDFEVRNDVELIILAESSEHKAYSRVAVSIQDVNDNAPCFEQSIYQ 1899
Query: 109 FSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
SV EGQ A V +V A+D D G N V YS+ + F +DA +G + T+ LD+E
Sbjct: 1900 ASVSEGQGYNAHVIQVTASDPDSGLNGRVEYSIVSGNQGEAFQIDALSGVLTTSALLDHE 1959
Query: 165 KQQLY 169
+ Y
Sbjct: 1960 STKSY 1964
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 19/111 (17%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE--GQNAVVYY 138
LS+ T+ +RV+D+ND+ P F Y SV E G V V A+DADE +A + Y
Sbjct: 183 LSTQETLLLRVSDLNDQPPVFSQEHYRASVSEAAAPGTTVTWVSASDADEPGTDHARLRY 242
Query: 139 SVPEDI----------------PFVVDANTGDIRTNKALDYEKQQLYLERV 173
++ + F +D +G I T + LD E Q+ RV
Sbjct: 243 ALDQSSALCSSEALRPGAECGPAFTIDPESGAISTVRTLDREAQEALELRV 293
>gi|14589946|ref|NP_116755.1| protocadherin-11 Y-linked isoform c [Homo sapiens]
gi|74762719|sp|Q9BZA8.1|PC11Y_HUMAN RecName: Full=Protocadherin-11 Y-linked; Short=Protocadherin-11;
AltName: Full=Protocadherin on the Y chromosome;
Short=PCDH-Y; AltName: Full=Protocadherin prostate
cancer; Short=Protocadherin-PC; AltName:
Full=Protocadherin-22; Flags: Precursor
gi|13161060|gb|AAK13469.1|AF332217_1 protocadherin 11 [Homo sapiens]
gi|157169592|gb|AAI52898.1| Protocadherin 11 Y-linked [synthetic construct]
gi|261857964|dbj|BAI45504.1| protocadherin 11 Y-linked [synthetic construct]
Length = 1340
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 77/162 (47%), Gaps = 26/162 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------------ 77
G+ LM+V ATD DSG + Y L DA F+LD T ++
Sbjct: 514 GIQLMKVSATDADSGPNAEINYLL---GPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLF 570
Query: 78 -----DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--QDGLAVGRVHATDA 128
D G L+S TV + + D ND +P F Y+F VPE + G VG + TD
Sbjct: 571 TILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPENLPRHG-TVGLITVTDP 629
Query: 129 DEGQNAVVYYSV-PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D G N+ V S+ E+ F +D+ TG IR N + D EKQ+ Y
Sbjct: 630 DYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESY 671
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 10/98 (10%)
Query: 78 DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
++GG SSTA + + VTD ND +P F+ E S+PE G +V ++HATDAD G+N
Sbjct: 254 EDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGEN 313
Query: 134 AVVYYSVPEDIP------FVVDANTGDIRTNKALDYEK 165
A +++S + F ++A TG I + LD E+
Sbjct: 314 AKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREE 351
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+ +A + I+V D ND P F S+PE G+ + +V ATDAD G NA + Y +
Sbjct: 478 LNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLL 537
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLYL 170
D P F +D TG + K LD EK+ YL
Sbjct: 538 GPDAPPEFSLDRRTGMLTVVKKLDREKEDKYL 569
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 71/171 (41%), Gaps = 34/171 (19%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP---------------I 76
T+ + TD D G V +LD N D F +D T P +
Sbjct: 620 TVGLITVTDPDYGDNSAVTLSILDENDD----FTIDSQTGVIRPNISFDREKQESYTFYV 675
Query: 77 QDEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFS----VPEGQDGLAVGRVHATDA 128
+ E G SS+A V I V D+ND P F PY +S +P G V +V A D
Sbjct: 676 KAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPSTNPGTVVFQVIAVDN 735
Query: 129 DEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D G NA V YS+ D+ F +D TG+I + D L L RV +
Sbjct: 736 DTGMNAEVRYSIVGGNTRDL-FAIDQETGNITLMEKCDV--TDLGLHRVLV 783
>gi|355754723|gb|EHH58624.1| Protocadherin-13 [Macaca fascicularis]
Length = 952
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 78/159 (49%), Gaps = 26/159 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQGPIQ 77
L ++ ATD DSG+ G V Y L DA SYF+LD T ++ ++
Sbjct: 555 LTKLYATDADSGERGQVSYFL---GPDAPSYFSLDSVTGILTVSTQLDREEKERYRYTVR 611
Query: 78 D-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQ 132
+GG S ATV + V D ND +P F + + F VPE G +G + TDAD G+
Sbjct: 612 AVDGGKPPRESVATVALTVLDKNDNSPRFINKDFSFFVPENFPGYGEIGVISVTDADAGR 671
Query: 133 NAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
N V SV DI FV+D G +R +LD E+Q Y
Sbjct: 672 NGWVALSVVNQSDI-FVIDTGKGMLRAKVSLDREQQSSY 709
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 51/106 (48%), Gaps = 14/106 (13%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLP-----YEFSVPEGQDGLAVGRVHATDADEGQN 133
E LSSTA + I + DIND NP P Y +P G V V+A D D G N
Sbjct: 720 EPALSSTAKITILLLDIND-NPPLVLFPQSNMSYLLVLPSTLPGSPVTEVYAVDKDTGMN 778
Query: 134 AVVYYSV-----PEDIPFVVDANTGDIRTNKAL---DYEKQQLYLE 171
AV+ YS+ P F +D TG+I +AL DY +L ++
Sbjct: 779 AVIAYSIIGRRGPRPESFRIDPKTGNITLEEALLQTDYGLHRLLVK 824
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 63/148 (42%), Gaps = 29/148 (19%)
Query: 38 ATDKDSGKFGLVEYRLLD------------NNTDAASYF----NLDPATEHQGP---IQD 78
A D D G G+ YRLLD N + Y LD T+ Q I +
Sbjct: 235 AVDPDVGINGVQTYRLLDYHGMFTLDVEENENGERTPYLIVMGALDRETQDQYVSIIIAE 294
Query: 79 EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEGQNA 134
+GG L +AT+ I ++DIND P F +V G + V A D D G NA
Sbjct: 295 DGGSPPLLGSATLTIGISDINDNCPLFTDSQINVTVYGNATVGTPIAAVQAVDKDLGTNA 354
Query: 135 VVYYSVPEDIP------FVVDANTGDIR 156
+ YS + +P F +D NTG I+
Sbjct: 355 QITYSYSQKVPQASKDLFHLDENTGVIK 382
>gi|156368055|ref|XP_001627512.1| predicted protein [Nematostella vectensis]
gi|156214424|gb|EDO35412.1| predicted protein [Nematostella vectensis]
Length = 1677
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 22/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + +G T++QV ATD DSG G + Y + ++ F L+ T
Sbjct: 535 YKGTISEGASIGATVLQVSATDVDSGDNGRITYEISSSDAQVNGLFELNTQTGVLWTKSQ 594
Query: 71 ---------EHQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
+D G L S+ V + ++DIND P F + Y S+ E +
Sbjct: 595 LDRETKSLYSFTVLAKDHGDPQLMSSVKVELTISDINDNAPVFYPVEYFASIMENEPPGK 654
Query: 120 VGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ +V ATDADEG NAV+ Y + + F +D++TG I T +LD+E ++ +
Sbjct: 655 LLQVTATDADEGTNAVISYDIIGGNNNGNFSIDSSTGVISTLASLDHEVEEFF 707
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 80/159 (50%), Gaps = 25/159 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------E 71
+G ++ + A+DKD G+ GL++Y + +N + A+ F+++ AT E
Sbjct: 1279 IGSLVINLNASDKDIGQNGLIKYSI--SNGNLAAMFDVESATGRLIVAKSLDFETTQLYE 1336
Query: 72 HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
QD G LSST V + V D+ND P F + P +V E + G VGR A+D
Sbjct: 1337 LTITAQDHGLIPLSSTVNVTVNVLDVNDNAPLFPTQPVTLTVRENVNTGFPVGRCTASDR 1396
Query: 129 DEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
D G NA + +S+ P F V++ T +I T A+D E
Sbjct: 1397 DTGTNAHIAFSMYSQTPSKTFSVNSATCEITTIAAIDLE 1435
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 70/176 (39%), Gaps = 27/176 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------P 68
Y A + + G ++Q+ ATD D G G V Y + N +F +D P
Sbjct: 430 YTANISELAQNGSYVLQLNATDPDEGDNGTVSYSITGGND--LGWFQVDFQSGLVTTAKP 487
Query: 69 ATEHQGP-------IQDEGGLSSTA--TVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
Q QD G T TV + + D ND P F Y+ ++ EG G
Sbjct: 488 LDREQVSSVTITITAQDHGSAPKTGSTTVTVTIIDGNDNKPRFMKSSYKGTISEGASIGA 547
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-----FVVDANTGDIRTNKALDYEKQQLY 169
V +V ATD D G N + Y + F ++ TG + T LD E + LY
Sbjct: 548 TVLQVSATDVDSGDNGRITYEISSSDAQVNGLFELNTQTGVLWTKSQLDRETKSLY 603
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 27/165 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------EHQG--------P 75
L+QV ATD D G ++ Y ++ N + F++D +T +H+
Sbjct: 655 LLQVTATDADEGTNAVISYDIIGGNNNGN--FSIDSSTGVISTLASLDHEVEEFFSLIIS 712
Query: 76 IQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQ 132
+D G + TA VN+ V + D P F Y F+V E G VGRV+AT D +
Sbjct: 713 AKDGGNKYAAKTAVVNVTVLNKADNLPVFLYEMYNFTVYENVPKGTLVGRVYATTKD--K 770
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERVF 174
N + Y++ P F+VD+ G I+ N +D E++ YL V
Sbjct: 771 NGSISYAIVSGDPTNLFLVDSTGGIIKINGDMDREEKAQYLLAVI 815
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 82/190 (43%), Gaps = 33/190 (17%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG- 74
+L+Y R+ ++ T ATD D+G G V+Y + D + F+L G
Sbjct: 97 TLYYTLRIRESMDVNTTNPINTATDPDAGNNGTVDYTIASG--DNTATFSLGTTACPTGS 154
Query: 75 --------PIQDEGG----LSSTAT------------VNIRVTDINDKNPEFQSLPYEFS 110
P+ E L+ TAT +NI + D ND P F Y S
Sbjct: 155 TLCVITKKPLDRETTDFYQLNITATDRGTPALMGYCLINITILDENDHAPVFTQNSYLGS 214
Query: 111 VPEG-QDGLAVGRVHATDADEGQNAVVYYSVPEDI-----PFVVDANTGDIRTNKALDYE 164
+ E + G+++ RV A D D G N + Y++ D F +D++TG IRT + LD+E
Sbjct: 215 IAENTKPGVSILRVSAADRDSGSNGDIKYAIDWDAIQSNSIFDLDSSTGVIRTKQNLDFE 274
Query: 165 KQQLYLERVF 174
+ Y V
Sbjct: 275 VKNSYTFNVI 284
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDI 144
A V + VTD+ND P F Y +V E G V R+ A DADEG NA +YS+
Sbjct: 1143 AIVIVTVTDLNDNAPVFSRAVYAITVSELSLPGSPVFRIKAMDADEGDNAKFFYSLVSGT 1202
Query: 145 ---PFVVDANTGDIRTNKALDYEKQQLY 169
F ++++TG++ +K LD E Y
Sbjct: 1203 GMDKFFINSSTGELHLSKTLDRETTSSY 1230
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVP 141
S+ V I VTD+ND +P F S Y ++ E Q+G V +++ATD DEG N V YS+
Sbjct: 406 STLGFVLIDVTDVNDNSPAFTSNAYTANISELAQNGSYVLQLNATDPDEGDNGTVSYSIT 465
Query: 142 --EDIP-FVVDANTGDIRTNKALDYEK 165
D+ F VD +G + T K LD E+
Sbjct: 466 GGNDLGWFQVDFQSGLVTTAKPLDREQ 492
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV 140
L STA + I V D ND+ P F Y ++ E G V ++A+D D GQN ++ YS+
Sbjct: 1244 LYSTAKIEITVGDSNDQRPVFPESDYTVNITEDALIGSLVINLNASDKDIGQNGLIKYSI 1303
Query: 141 PED---IPFVVDANTGDIRTNKALDYEKQQLY 169
F V++ TG + K+LD+E QLY
Sbjct: 1304 SNGNLAAMFDVESATGRLIVAKSLDFETTQLY 1335
Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 20/105 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
+ G++A + GV++++V A D+DSG G ++Y + + + S F+LD +T
Sbjct: 211 YLGSIAENTKP-GVSILRVSAADRDSGSNGDIKYAIDWDAIQSNSIFDLDSSTGVIRTKQ 269
Query: 71 ----EHQGP-----IQDEGGLSST---ATVNIRVTDINDKNPEFQ 103
E + I +GG+ S ATV I V D ND +P+ +
Sbjct: 270 NLDFEVKNSYTFNVIASDGGVPSKNDLATVTINVLDTNDNSPQLK 314
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVH-ATDADEGQNAVVYYSV 140
+V ++V DIND P F +L Y + E D ++ ATD D G N V Y++
Sbjct: 80 SVQVQVDDINDNEPRFPTLYYTLRIRESMDVNTTNPINTATDPDAGNNGTVDYTI 134
Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 24/151 (15%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE---HQGPIQ------------DEG 80
V A D+DSGK G + Y + N + F + P + + +Q +G
Sbjct: 968 VVAVDQDSGKNGQLFYSIPQGNEEG--LFGIFPGGKLYIRKSLLQALKGSYDLIVRATDG 1025
Query: 81 GL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRV--HATDADEGQNA 134
G+ S++ V I + D ND F + + F+V E G VG + HA D ++
Sbjct: 1026 GVPSFSASVPVTIYIQDSNDHRSLFVNNTFRFAVAENSSPGTLVGTLVAHALDHSRTKD- 1084
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEK 165
+VY + + F VD +G I T LD E+
Sbjct: 1085 IVYSLISSESHFAVDVRSGQITTRVRLDREE 1115
>gi|14039481|gb|AAK53238.1|AF326313_1 protocadherin-betaT [Mus musculus]
Length = 844
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 20/172 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY + +G ++ + A D D G +G + Y L + D F ++P +
Sbjct: 291 FYEVQVPEDMPIGSSITAISAKDLDMGIYGKISYSFLHASEDIRKTFEINPTSGEVNLRS 350
Query: 71 --------EHQGPIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
+ IQ D GGLS+ T++++V DIND PE ++PE V
Sbjct: 351 LMDFEVIQSYSVNIQATDGGGLSAKCTLSVKVLDINDNAPEVIMSSVTKAIPENASETLV 410
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVD---ANTGDIRTNKALDYEKQQLY 169
D D G N + S+ +D+PF++ N + + KALD E++ Y
Sbjct: 411 ALFSVRDQDSGDNGRILCSIQDDLPFILKPSFKNFFTLLSEKALDRERRAEY 462
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS- 139
L++ T+ ++V+DIND P F Y + E L +G + ATD D G NA + YS
Sbjct: 476 LTTQHTIRVQVSDINDNAPAFTQTSYTMFIYENNSPALHIGTISATDKDSGSNAHITYSL 535
Query: 140 VPEDIP-------FVVDANTGDIRTNKALDYEKQQLY 169
+P P ++A+ G + +ALDYE Q +
Sbjct: 536 LPAQDPELALASLISINADNGQLFALRALDYEVLQAF 572
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 72/168 (42%), Gaps = 27/168 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASY--FNLDPATEHQGPIQ 77
+G T + A D D G L +Y + + ++ D Y LD A +H+ +
Sbjct: 193 IGATFLIENAQDLDIGSNSLQDYSISPSSYFYVKIHDSGDGKIYPELVLDKALDHEEESE 252
Query: 78 D-------EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
+GG S T + I+V DIND PEF YE VPE G ++ + A
Sbjct: 253 LRLTLTALDGGSPPRSGTTLIVIKVLDINDNAPEFAQSFYEVQVPEDMPIGSSITAISAK 312
Query: 127 DADEGQNAVVYYS---VPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
D D G + YS EDI F ++ +G++ +D+E Q Y
Sbjct: 313 DLDMGIYGKISYSFLHASEDIRKTFEINPTSGEVNLRSLMDFEVIQSY 360
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 68/170 (40%), Gaps = 35/170 (20%)
Query: 36 VKATDKDSGKFGLVEYRLL-------------DNNTDAASYFNLDP-------ATEHQGP 75
+ ATDKDSG + Y LL N D F L A E Q
Sbjct: 518 ISATDKDSGSNAHITYSLLPAQDPELALASLISINADNGQLFALRALDYEVLQAFEFQVG 577
Query: 76 IQDEG--GLSSTATVNIRVTDINDKNP------EFQSLPYEFSVPE-GQDGLAVGRVHAT 126
D G LSS V + V D ND P + S P +P + G V +V A
Sbjct: 578 ATDRGSPALSSQTLVRVVVLDDNDNAPFVLYPMQNASAPCTELLPRVAEPGYLVTKVVAV 637
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL---DYEKQQLYL 170
D D GQNA + + + E F V A+ G++RT + L D K +L L
Sbjct: 638 DRDSGQNAWLSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDVPKHRLVL 687
>gi|72005046|ref|XP_787157.1| PREDICTED: protocadherin-7-like [Strongylocentrotus purpuratus]
Length = 1326
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
S Y A + +E G + V+A DKD + G V Y LLD+ + +
Sbjct: 461 SSVYHATISENNEPGHRVATVQAIDKDELENGEVVYSLLDDKDGSFGIHPFNGVLTANVS 520
Query: 76 IQDEGGLS----------------STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGL 118
+ E G S S + +RV D+ND P F E + E + G
Sbjct: 521 LDREDGESIDLMIRACDRGQPQGCSDVPLTVRVLDMNDNGPTFGGDLIEMRIDENKPSGT 580
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
VGR ATDADEG N + YS+ D F +D ++G I + LD E Q+LY
Sbjct: 581 IVGRAVATDADEGDNGRLRYSILTDAVFRIDEDSGRIYSTAELDREIQELY 631
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 78 DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
D+GG LS T+N+ V D +D +P F Y+ SV E G + +V A+D D G N
Sbjct: 213 DDGGDPVLSGVTTLNVTVLDSDDHSPVFDRTSYQVSVAENIGVGQHIIQVRASDPDTGTN 272
Query: 134 AVVYY----SVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+ Y SV I F +D+ +G + LD+E + +
Sbjct: 273 GQIIYDFGGSVSAKIIELFEIDSESGWLSVKSELDFEDESSH 314
Score = 36.6 bits (83), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 9/106 (8%)
Query: 63 YFNLDPATEHQG-PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAV 120
++N+ E +G P+ LSS + V D ND +P F S Y ++ E + G V
Sbjct: 424 FYNITILAEDRGSPV-----LSSRRRFAVFVDDENDNSPIFSSSVYHATISENNEPGHRV 478
Query: 121 GRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYE 164
V A D DE +N V YS+ +D F + G + N +LD E
Sbjct: 479 ATVQAIDKDELENGEVVYSLLDDKDGSFGIHPFNGVLTANVSLDRE 524
>gi|14589944|ref|NP_116754.1| protocadherin-11 Y-linked isoform b [Homo sapiens]
gi|13161057|gb|AAK13468.1|AF332216_1 protocadherin 11 [Homo sapiens]
Length = 1048
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 77/162 (47%), Gaps = 26/162 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------------ 77
G+ LM+V ATD DSG + Y L DA F+LD T ++
Sbjct: 514 GIQLMKVSATDADSGPNAEINYLL---GPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLF 570
Query: 78 -----DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--QDGLAVGRVHATDA 128
D G L+S TV + + D ND +P F Y+F VPE + G VG + TD
Sbjct: 571 TILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPENLPRHG-TVGLITVTDP 629
Query: 129 DEGQNAVVYYSV-PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D G N+ V S+ E+ F +D+ TG IR N + D EKQ+ Y
Sbjct: 630 DYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESY 671
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 10/98 (10%)
Query: 78 DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
++GG SSTA + + VTD ND +P F+ E S+PE G +V ++HATDAD G+N
Sbjct: 254 EDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGEN 313
Query: 134 AVVYYSVPEDIP------FVVDANTGDIRTNKALDYEK 165
A +++S + F ++A TG I + LD E+
Sbjct: 314 AKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREE 351
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+ +A + I+V D ND P F S+PE G+ + +V ATDAD G NA + Y +
Sbjct: 478 LNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLL 537
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLYL 170
D P F +D TG + K LD EK+ YL
Sbjct: 538 GPDAPPEFSLDRRTGMLTVVKKLDREKEDKYL 569
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 71/171 (41%), Gaps = 34/171 (19%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP---------------I 76
T+ + TD D G V +LD N D F +D T P +
Sbjct: 620 TVGLITVTDPDYGDNSAVTLSILDENDD----FTIDSQTGVIRPNISFDREKQESYTFYV 675
Query: 77 QDEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFS----VPEGQDGLAVGRVHATDA 128
+ E G SS+A V I V D+ND P F PY +S +P G V +V A D
Sbjct: 676 KAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPSTNPGTVVFQVIAVDN 735
Query: 129 DEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D G NA V YS+ D+ F +D TG+I + D L L RV +
Sbjct: 736 DTGMNAEVRYSIVGGNTRDL-FAIDQETGNITLMEKCDV--TDLGLHRVLV 783
>gi|351710309|gb|EHB13228.1| Cadherin EGF LAG seven-pass G-type receptor 1 [Heterocephalus
glaber]
Length = 3064
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 84/180 (46%), Gaps = 28/180 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y R+ E+G ++ ++ATD D+ + YRLL+ A F +D
Sbjct: 186 YRERVRENLEVGYEVLTIRATDGDAPSNANMRYRLLEG---AGGVFEIDARSGVVRTRAV 242
Query: 69 -----ATEHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QD 116
A E+Q ++ + G LS+TATV+I V D ND P+F Y VPE
Sbjct: 243 VDREEAAEYQLLVEANDQGRNPGPLSATATVHIVVEDENDNYPQFSEKRYVVQVPEDVAV 302
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V RV ATD D+GQNA ++YS+ F + + +G + LD+E + Y R+
Sbjct: 303 NTPVLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLRI 362
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 75/159 (47%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQ-- 73
+G +++ ++A D+D+ ++ Y+L NT + LD E Q
Sbjct: 530 VGSSVLTLRARDRDANS--VITYQLTGGNTRNRFALSSQSGGGLITLALPLDYKQERQYV 587
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G S T V I VTD N P FQS Y SV E + G ++ + ATD D G
Sbjct: 588 LAVTASDGTRSHTVQVFINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATISATDEDTG 647
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + +P F +D NTG I T LDYE Q Y
Sbjct: 648 ENARITYVLEDPVPQFRIDPNTGTIYTMTELDYEDQAAY 686
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 33/181 (18%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY------------------------RL 53
FY + +++QV ATD+DSG G + Y R
Sbjct: 724 FYQGSVFEDAPPSTSVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRR 783
Query: 54 LDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
LD + A Y A + P LS++ + + V DIND P F+ E V E
Sbjct: 784 LDRE-NVAVYSLRALAVDRGSP----AALSASVEIQVTVLDINDNPPVFERDELELFVEE 838
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLY 169
G V ++ A D DEG NA + Y + E ++P F +D +GD+R LD+E ++ Y
Sbjct: 839 NSPVGSVVAKIRANDPDEGPNAQIMYQIVEGNMPEVFQLDLLSGDLRALAELDFEVRRDY 898
Query: 170 L 170
+
Sbjct: 899 V 899
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 39/176 (22%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQGPIQDE 79
+++V+ATD+D G+ + Y ++ N Y + + E+ I+ +
Sbjct: 306 VLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLRIKAQ 365
Query: 80 GG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
G ++S+ V+++V D+ND P F S P++ +V E G +V + A DAD G+N
Sbjct: 366 DGGRPPLINSSGLVSVQVLDVNDNAPIFVSSPFQATVLENVPLGHSVLHIQAVDADAGEN 425
Query: 134 AVVYYSV--------------PE------DIPFVVDANTGDIRTNKALDYEKQQLY 169
+ + Y + PE D PF + ++G I LD E+ + Y
Sbjct: 426 SRLRYRLVDTSSAALGGDSAGPEDPDSTLDFPFQIHNSSGWITVCAELDREEVEHY 481
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 80/193 (41%), Gaps = 28/193 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y + +G ++ + ATD+D+G+ + Y L D F +DP T
Sbjct: 619 SSHYTVSVSEDRPVGTSIATISATDEDTGENARITYVL----EDPVPQFRIDPNTGTIYT 674
Query: 71 ------EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E Q QD G S T ++ I + D ND P F Y+ SV E
Sbjct: 675 MTELDYEDQAAYTLAITAQDNGIPQKSDTTSLEILILDANDNVPRFLRDFYQGSVFEDAP 734
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
+V +V ATD D G N + Y+ D F ++ +G IRT + LD E +Y
Sbjct: 735 PSTSVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRENVAVYSL 794
Query: 172 RVFLISKFATSYL 184
R + + + + L
Sbjct: 795 RALAVDRGSPAAL 807
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
S+ + + V+D ND +P F+ Y V E + G V + ATD D NA + Y +
Sbjct: 162 SAATYLTVTVSDTNDHSPVFEQSEYRERVRENLEVGYEVLTIRATDGDAPSNANMRYRLL 221
Query: 142 EDIP--FVVDANTGDIRTNKALDYEKQQLY 169
E F +DA +G +RT +D E+ Y
Sbjct: 222 EGAGGVFEIDARSGVVRTRAVVDREEAAEY 251
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 42/182 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA---SYFNLDPATEHQGPIQ-------- 77
LG +++ ++A D D+G+ + YRL+D ++ A S DP + P Q
Sbjct: 408 LGHSVLHIQAVDADAGENSRLRYRLVDTSSAALGGDSAGPEDPDSTLDFPFQIHNSSGWI 467
Query: 78 ---------------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
D G +SS+A+V+I V D+ND +P F YE + E
Sbjct: 468 TVCAELDREEVEHYSFGVEAVDHGSPPMSSSASVSITVLDVNDNDPVFTQPLYELRLNED 527
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQL 168
G +V + A D D N+V+ Y + + G I LDY++++
Sbjct: 528 AAVGSSVLTLRARDRDA--NSVITYQLTGGNTRNRFALSSQSGGGLITLALPLDYKQERQ 585
Query: 169 YL 170
Y+
Sbjct: 586 YV 587
>gi|395820216|ref|XP_003783470.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Otolemur
garnettii]
Length = 3016
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 76/159 (47%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQ-- 73
+G +++ ++A D+D+ ++ Y+L NT + LD E Q
Sbjct: 715 VGSSVLTLRAEDRDANS--VITYQLTGGNTRNRFALSSQSGGGLITLALPLDYKQERQYV 772
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G S TA V I +TD N P FQS Y SV E Q G ++ + ATD D G
Sbjct: 773 LAVTASDGMRSHTAQVFINITDANTHRPVFQSSHYTVSVSEDQPVGTSIATISATDEDTG 832
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA V Y + + +P F +D +TG I T LDYE Q Y
Sbjct: 833 ENARVTYVLEDPVPQFRIDPDTGTIYTTTELDYEDQAAY 871
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 84/182 (46%), Gaps = 32/182 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y R+ E+G ++ ++ATD D+ + YRLL+ A F +D +
Sbjct: 376 YRERVRENLEVGYEVLTIRATDGDAPSNANMRYRLLEG---AGGIFEIDARSGVVRTRAV 432
Query: 71 ---------------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG- 114
+ QG ++ G LS+TATV+I V D ND P+F Y VPE
Sbjct: 433 VDREEGAEYRLLVEADDQG--RNPGPLSATATVHIVVEDENDNYPQFSEKRYVVQVPEDV 490
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLE 171
AV RV ATD D+GQNA ++YS+ F + + +G + LD+E + Y
Sbjct: 491 AVNTAVLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTL 550
Query: 172 RV 173
R+
Sbjct: 551 RI 552
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 77/163 (47%), Gaps = 25/163 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EH------QG 74
+++Q+ ATD+DSG G + Y D F ++P + EH +
Sbjct: 923 SVLQISATDRDSGPNGRLLY-TFQGGDDGDGDFYIEPTSGVIRTQRRLDREHVAVYSLRA 981
Query: 75 PIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
D G LS+ + + V DIND P F+ E V E G V R+HA D DE
Sbjct: 982 LAVDRGSPAPLSALVEIQVTVLDINDNPPVFERDELELFVEENSPVGSVVARIHADDPDE 1041
Query: 131 GQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
G NA + Y + E ++P F +D +GD+R LD+E Q+ Y+
Sbjct: 1042 GPNAQIMYQIVEGNVPEVFQLDLLSGDLRALVELDFEVQREYV 1084
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 76/171 (44%), Gaps = 34/171 (19%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQGPIQDE 79
+++V+ATD+D G+ + Y ++ N Y + + E+ I+ +
Sbjct: 496 VLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLRIKAQ 555
Query: 80 GG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
G ++S+ V ++V D+ND P F S P++ +V E G +V + A DAD G+N
Sbjct: 556 DGGRPPLINSSGLVAVQVLDVNDNAPIFVSSPFQAAVLENVPLGYSVLHIQAVDADAGEN 615
Query: 134 AVVYYSVPE---------------DIPFVVDANTGDIRTNKALDYEKQQLY 169
A + Y + + PF + ++G I LD E+ + Y
Sbjct: 616 ARLRYRLVDTASAGPGSESAATTPGFPFQIHNSSGWITVCAELDREEVERY 666
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 23/163 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYR-------------LLDNNTDAASYFN-LDPATEHQGP 75
G +++++A D D+G+ G + Y+ L+D++T A S LD T+
Sbjct: 279 GTAVIELRAHDPDAGEAGRLSYQMEALFDERSNGYFLIDSDTGAVSTARALDRETQDTHV 338
Query: 76 IQ----DEGGLSSTAT--VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
++ D G +A + + V+D ND +P F+ Y V E + G V + ATD
Sbjct: 339 LKVSAVDHGSPRRSAATYLTVTVSDTNDHSPVFEQSEYRERVRENLEVGYEVLTIRATDG 398
Query: 129 DEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
D NA + Y + E F +DA +G +RT +D E+ Y
Sbjct: 399 DAPSNANMRYRLLEGAGGIFEIDARSGVVRTRAVVDREEGAEY 441
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 78/187 (41%), Gaps = 28/187 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y + +G ++ + ATD+D+G+ V Y L D F +DP T
Sbjct: 804 SSHYTVSVSEDQPVGTSIATISATDEDTGENARVTYVL----EDPVPQFRIDPDTGTIYT 859
Query: 71 ------EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E Q +D G S T ++ I + D ND P+F Y+ SV E
Sbjct: 860 TTELDYEDQAAYTLAITARDNGIPQKSDTTSLEILILDANDNAPQFLRDFYQGSVFEDAP 919
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
+V ++ ATD D G N + Y+ D F ++ +G IRT + LD E +Y
Sbjct: 920 PSTSVLQISATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDREHVAVYSL 979
Query: 172 RVFLISK 178
R + +
Sbjct: 980 RALAVDR 986
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 99 NPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP------EDIPFVVDAN 151
+P+F Y+ SVPE Q G AV + A D D G+ + Y + + F++D++
Sbjct: 260 SPQFPLPSYQVSVPENQPAGTAVIELRAHDPDAGEAGRLSYQMEALFDERSNGYFLIDSD 319
Query: 152 TGDIRTNKALDYEKQQLYLERV 173
TG + T +ALD E Q ++ +V
Sbjct: 320 TGAVSTARALDRETQDTHVLKV 341
Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 75/179 (41%), Gaps = 41/179 (22%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ----------- 77
LG +++ ++A D D+G+ + YRL+D T +A + AT P Q
Sbjct: 598 LGYSVLHIQAVDADAGENARLRYRLVD--TASAGPGSESAATTPGFPFQIHNSSGWITVC 655
Query: 78 ------------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQD 116
D G +SS+A+V+I V D+ND +P F YE + E
Sbjct: 656 AELDREEVERYSFAVEAVDHGSPPMSSSASVSITVLDVNDNDPVFTQPMYEVRLNEDAAV 715
Query: 117 GLAVGRVHATDADEGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
G +V + A D D N+V+ Y + + G I LDY++++ Y+
Sbjct: 716 GSSVLTLRAEDRDA--NSVITYQLTGGNTRNRFALSSQSGGGLITLALPLDYKQERQYV 772
>gi|348514345|ref|XP_003444701.1| PREDICTED: protocadherin alpha-3-like [Oreochromis niloticus]
Length = 615
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 79/176 (44%), Gaps = 25/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-NTDAASYFNLDPAT------- 70
Y + ++G ++QV ATD D G G V Y ++ N + S +++ T
Sbjct: 248 YSVTLNENVQVGTPIIQVNATDLDDGPNGDVVYSFSNSMNQNILSIIDINSLTGQLTVKG 307
Query: 71 ------------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDG 117
E Q + L++ +VNI++ D+ND PE + + S+PE + G
Sbjct: 308 LIDYEEQDGYEIEIQASDRGLAPLTTEKSVNIKIIDVNDNAPEIEVTSFSSSIPEDSRPG 367
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD----IRTNKALDYEKQQLY 169
V + D D G N V SV ED+PF++ + D + T +LD EKQ Y
Sbjct: 368 TTVALISVNDLDSGLNGKVICSVNEDVPFILSTSLKDKMFSLVTKSSLDREKQSQY 423
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 15/133 (11%)
Query: 46 FGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSL 105
F LV LD + S + L + G Q LSS T+++ V+D+ND PEF
Sbjct: 407 FSLVTKSSLDR--EKQSQYELTITAKDAGQPQ----LSSEKTISVAVSDVNDNRPEFSLS 460
Query: 106 PYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPED-------IPFV-VDANTGDIR 156
PY F V EG + G +V V A+D DE NA + Y + D F+ ++ + GD+
Sbjct: 461 PYTFYVTEGNNPGASVFSVKASDRDENDNARISYHIIRDGSEDNKVTSFLNINNDNGDVL 520
Query: 157 TNKALDYEKQQLY 169
K+ D+E + +
Sbjct: 521 ALKSFDFETLKTF 533
>gi|109120891|ref|XP_001086611.1| PREDICTED: protocadherin-20 isoform 1 [Macaca mulatta]
Length = 952
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 78/159 (49%), Gaps = 26/159 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQGPIQ 77
L ++ ATD DSG+ G V Y L DA SYF+LD T ++ ++
Sbjct: 555 LTKLYATDADSGERGQVSYFL---GPDAPSYFSLDSVTGILTVSTQLDREEKERYRYTVR 611
Query: 78 D-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQ 132
+GG S ATV + V D ND +P F + + F VPE G +G + TDAD G+
Sbjct: 612 AVDGGKPPRESVATVALTVLDKNDNSPRFINKDFSFFVPENFPGYGEIGVISVTDADAGR 671
Query: 133 NAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
N V SV DI FV+D G +R +LD E+Q Y
Sbjct: 672 NGWVALSVVNQSDI-FVIDTGKGMLRAKVSLDREQQSSY 709
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 51/106 (48%), Gaps = 14/106 (13%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLP-----YEFSVPEGQDGLAVGRVHATDADEGQN 133
E LSSTA + I + DIND NP P Y +P G V V+A D D G N
Sbjct: 720 EPALSSTAKITILLLDIND-NPPLVLFPQSNMSYLLVLPSTLPGSPVTEVYAVDKDTGMN 778
Query: 134 AVVYYSV-----PEDIPFVVDANTGDIRTNKAL---DYEKQQLYLE 171
AV+ YS+ P F +D TG+I +AL DY +L ++
Sbjct: 779 AVIAYSIIGRRGPRPESFRIDPKTGNITLEEALLQTDYGLHRLLVK 824
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 63/148 (42%), Gaps = 29/148 (19%)
Query: 38 ATDKDSGKFGLVEYRLLD------------NNTDAASYF----NLDPATEHQGP---IQD 78
A D D G G+ YRLLD N + Y LD T+ Q I +
Sbjct: 235 AVDPDVGINGVQTYRLLDYHGMFTLDVEENENGERTPYLIVMGALDRETQDQYVSIIIAE 294
Query: 79 EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEGQNA 134
+GG L +AT+ I ++DIND P F +V G + V A D D G NA
Sbjct: 295 DGGSPPLLGSATLTIGISDINDNCPLFTDSQINVTVYGNATVGTPIAAVQAVDKDLGTNA 354
Query: 135 VVYYSVPEDIP------FVVDANTGDIR 156
+ YS + +P F +D NTG I+
Sbjct: 355 QITYSYSQKVPQASKDLFHLDENTGVIK 382
>gi|194382270|dbj|BAG58890.1| unnamed protein product [Homo sapiens]
Length = 802
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 19/171 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY + +G +++V ATD D+G G + Y L + + F ++P T
Sbjct: 247 FYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKK 306
Query: 71 ----------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
E +D G S TV I+V D+ND PE + +PE V
Sbjct: 307 QLDFEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVV 366
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDA--NTGDIRTNKALDYEKQQLY 169
+D D G+N + S+ ED+PF++ + N + T + LD E + Y
Sbjct: 367 ALFSVSDLDSGENGKISCSIQEDLPFLLKSAENFYTLLTERPLDRESRAEY 417
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
S TA V I V D+ND PEF+ Y + E G V +V ATD D G N + YS+
Sbjct: 224 SGTAQVYIEVLDVNDNPPEFEQPFYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLF 283
Query: 141 --PEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
E+I F ++ TG+I K LD+EK Q Y
Sbjct: 284 QASEEIGKTFKINPLTGEIELKKQLDFEKLQSY 316
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 81/202 (40%), Gaps = 49/202 (24%)
Query: 9 ALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL-------------D 55
A TS +LF R+ + + + V ATD+DSG V Y LL
Sbjct: 450 AFTQTSYTLF----VRENNSPALHIRSVSATDRDSGTNAQVTYSLLPPQDPHLPLTSLVS 505
Query: 56 NNTDAASYFNLDP--------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNP- 100
N D F L A++H P LSS A V + V D ND +P
Sbjct: 506 INADNGHLFALRSLDYEALQGFQFRVGASDHGSP-----ALSSEALVRVVVLDANDNSPF 560
Query: 101 -----EFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDAN 151
+ S P VP + G V +V A D D GQNA + Y + + F V A+
Sbjct: 561 VLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATELGLFGVWAH 620
Query: 152 TGDIRTNKAL---DYEKQQLYL 170
G++RT + L D K +L +
Sbjct: 621 NGEVRTARLLSERDAAKHRLVV 642
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L + + + + D+ND P F Y V E L + V ATD D G NA V YS+
Sbjct: 431 LITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVTYSL 490
Query: 141 --PED--IPFV----VDANTGDIRTNKALDYEKQQLYLERV 173
P+D +P ++A+ G + ++LDYE Q + RV
Sbjct: 491 LPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRV 531
>gi|431892559|gb|ELK02992.1| Protocadherin beta-5 [Pteropus alecto]
Length = 795
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ--DGLAVGRVHATDADEGQNAVVYYSV 140
S T T+ + V DIND PEF YE VPE + L V RV A D D G V Y++
Sbjct: 223 SGTTTIRVEVVDINDNAPEFSQSLYEVQVPENSPLNSLVV-RVSARDLDAGTYGTVAYTL 281
Query: 141 PE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+ PFV+D TGDIR KALD+E Q Y
Sbjct: 282 FQGDEVTQPFVIDEITGDIRLKKALDFETTQYY 314
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 68/177 (38%), Gaps = 31/177 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT------------------- 58
Y + L +++V A D D+G +G V Y L +
Sbjct: 246 LYEVQVPENSPLNSLVVRVSARDLDAGTYGTVAYTLFQGDEVTQPFVIDEITGDIRLKKA 305
Query: 59 ---DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
+ Y+N++ A D GGLS TV I+V D+ND PE S PE
Sbjct: 306 LDFETTQYYNVEIAA------TDGGGLSGKCTVIIQVVDVNDNAPELTMSTLTSSTPENS 359
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIPFVVD---ANTGDIRTNKALDYEKQQLY 169
+ V +D D G N + S+ D+PF++ N + T LD E + Y
Sbjct: 360 PEIVVAVFSVSDPDSGDNGKMVCSIQNDLPFLLKPTFKNFYTLVTESPLDRETRSEY 416
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L + + + V+D+ND P F Y V E L +G + ATD D G NA V Y++
Sbjct: 430 LKTQHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSISATDRDAGANAQVTYAL 489
Query: 141 --PED--IPFV----VDANTGDIRTNKALDYE 164
P+D +P ++A+ G + +ALDYE
Sbjct: 490 LPPQDPQLPLASLVSINADNGQLFALRALDYE 521
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 79/197 (40%), Gaps = 39/197 (19%)
Query: 9 ALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL-------------D 55
A TS +LF R+ + + + + ATD+D+G V Y LL
Sbjct: 449 AFTQTSYTLF----VRENNSPALHIGSISATDRDAGANAQVTYALLPPQDPQLPLASLVS 504
Query: 56 NNTDAASYFNLDP-------ATEHQGPIQDEG--GLSSTATVNIRVTDINDKNP------ 100
N D F L E D G LSS A V + V D ND +P
Sbjct: 505 INADNGQLFALRALDYEALRVLEFGVGAADRGSPALSSQALVRVLVLDANDNSPFVLYPL 564
Query: 101 EFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIR 156
+ S P VP + G V +V A D D GQNA + Y + E F V A+ G++R
Sbjct: 565 QNGSAPCTELVPRAAEPGYLVSKVVAVDGDSGQNAWLSYQLLKATEPGLFSVWAHNGEVR 624
Query: 157 TNKAL---DYEKQQLYL 170
T + L D K +L +
Sbjct: 625 TARLLSERDAAKHRLLV 641
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 89 NIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV-PEDIPF 146
++++TDIND +PEF +PE Q G A D D G N V Y++ P
Sbjct: 120 DLQLTDINDHSPEFLEREMLLKIPESVQPGTVFPLKIAQDLDIGSNTVQNYTISPNSYFH 179
Query: 147 VVDANTGDIRT------NKALDYEKQ 166
VV N GD R +KALD E+Q
Sbjct: 180 VVTHNRGDGRKYPELVLDKALDREEQ 205
>gi|332023167|gb|EGI63423.1| Cadherin-related tumor suppressor [Acromyrmex echinatior]
Length = 1862
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Query: 53 LLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
LL NT ++Y NL+ G + L V I +TDIND P+FQ LPY V
Sbjct: 1180 LLVTNT-GSNYINLEATVIDNGINR----LRDRVKVTIYITDINDNVPQFQRLPYRVQVS 1234
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
EG G + RV+ TDADEG N V+YS+ + FV+D TG I K LD E
Sbjct: 1235 EGAAIGTQLLRVYTTDADEGLNGDVFYSLEDGNQYGHFVIDEATGQISLMKELDREMSDT 1294
Query: 169 YL 170
Y+
Sbjct: 1295 YV 1296
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYY--- 138
S+TA + I V D+ND P FQ Y + E G V + ATDAD G NA +YY
Sbjct: 499 SATAYLVIHVNDVNDHEPVFQQSEYSAVLSEFAPIGSFVASISATDADSGLNARIYYEFG 558
Query: 139 SVPEDIPFVVDANTGDIRTNKALDYEKQ 166
S E F +D++TG I T LD E Q
Sbjct: 559 SGNEQNWFAIDSDTGLITTVATLDREVQ 586
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 75/177 (42%), Gaps = 26/177 (14%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI 76
L Y + +G L++V TD D G G V Y L D N +F +D AT +
Sbjct: 1227 LPYRVQVSEGAAIGTQLLRVYTTDADEGLNGDVFYSLEDGN--QYGHFVIDEATGQISLM 1284
Query: 77 QD--------------------EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
++ E LSS+ATV+I V D ND P F SV E
Sbjct: 1285 KELDREMSDTYVLTVVAHDAGLETRLSSSATVHIEVLDENDNVPFFVDNKSRISVLETMS 1344
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ R ATD D G N+ + +++ + F +D TG + K LDYE+Q Y
Sbjct: 1345 INTELLRFKATDNDLGPNSELTFAISAGNKRDTFYIDPLTGILYLRKPLDYEEQIRY 1401
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 62/154 (40%), Gaps = 26/154 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAA--------------------SYFNLDPATEH 72
+ A D D G G + YR+ D N + Y+ L+
Sbjct: 1030 FFSLTAQDADLGNNGRILYRITDGNAEGRFGIFPDGQLYVKNELDREERDYYALEVIASD 1089
Query: 73 QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEG 131
QG SS V I V D ND PEF + + F + E + VG++ ATD D G
Sbjct: 1090 QG----SPSRSSVVPVVIHVIDENDNAPEFTNSSFSFHLRENEPPDTFVGKLLATDRDVG 1145
Query: 132 QNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYE 164
+NA + + +P FVVD G IR+ D E
Sbjct: 1146 RNADLIFLLPLIQNDFVVDPRNGFIRSQHVFDRE 1179
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
Query: 54 LDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
LD T A Y L A + P+Q SSTATV + + D+ND +P F Y S+ E
Sbjct: 689 LDRET-IAEYRLLVIAKDQGTPVQ-----SSTATVVLTLQDVNDNSPIFYPWKYLMSISE 742
Query: 114 G-QDGLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDY 163
G +G+V A DAD +NA V Y++ + FVV+ T +I + L++
Sbjct: 743 DILVGTTIGKVTAIDADARENAQVKYTLESGGEGLFVVEERTVEIIREEDLEH 795
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 80/186 (43%), Gaps = 30/186 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A+ + +G + + ATD DSG + Y N ++F +D T
Sbjct: 523 YSAVLSEFAPIGSFVASISATDADSGLNARIYYEFGSGN--EQNWFAIDSDTGLITTVAT 580
Query: 71 ---EHQGPIQ------DEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQDGLA 119
E QG I+ D G + A+ ++++T D ND+ P F E ++ E +
Sbjct: 581 LDREVQGSIELHVSARDGGPNTKYASTHLKITILDENDEVPRFPEDVIEIALSENTAPYS 640
Query: 120 -VGRVHATDADEGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEKQQLYLER 172
+ + A D D+G N V YS + F +DA TG + T ALD E Y R
Sbjct: 641 LIATLTAVDNDQGTNGSVAYSFHSSVLRDYSKTFALDALTGQLTTMTALDRETIAEY--R 698
Query: 173 VFLISK 178
+ +I+K
Sbjct: 699 LLVIAK 704
Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE-DIP 145
VN+ V D+ND P F Y ++ E G V VHATD D N+ + Y +P+ +
Sbjct: 277 VNVTVLDVNDNPPVFSQSDYVVALNESAPVGTKVLTVHATDKDSEDNSKLTYYLPDNERK 336
Query: 146 FVVDANTGDIRTNKALDYEKQQLYLER 172
F +D TG I T + L +Q+ + R
Sbjct: 337 FTIDPETGMITTAEPLKCPQQRCTVAR 363
>gi|14589942|ref|NP_116753.1| protocadherin-11 Y-linked isoform a [Homo sapiens]
gi|10803411|emb|CAC13122.1| protocadherin [Homo sapiens]
Length = 1037
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 77/162 (47%), Gaps = 26/162 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------------ 77
G+ LM+V ATD DSG + Y L DA F+LD T ++
Sbjct: 503 GIQLMKVSATDADSGPNAEINYLL---GPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLF 559
Query: 78 -----DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--QDGLAVGRVHATDA 128
D G L+S TV + + D ND +P F Y+F VPE + G VG + TD
Sbjct: 560 TILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPENLPRHG-TVGLITVTDP 618
Query: 129 DEGQNAVVYYSV-PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D G N+ V S+ E+ F +D+ TG IR N + D EKQ+ Y
Sbjct: 619 DYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESY 660
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 10/98 (10%)
Query: 78 DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
++GG SSTA + + VTD ND +P F+ E S+PE G +V ++HATDAD G+N
Sbjct: 243 EDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGEN 302
Query: 134 AVVYYSVPEDIP------FVVDANTGDIRTNKALDYEK 165
A +++S + F ++A TG I + LD E+
Sbjct: 303 AKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREE 340
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+ +A + I+V D ND P F S+PE G+ + +V ATDAD G NA + Y +
Sbjct: 467 LNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLL 526
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLYL 170
D P F +D TG + K LD EK+ YL
Sbjct: 527 GPDAPPEFSLDRRTGMLTVVKKLDREKEDKYL 558
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 71/171 (41%), Gaps = 34/171 (19%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP---------------I 76
T+ + TD D G V +LD N D F +D T P +
Sbjct: 609 TVGLITVTDPDYGDNSAVTLSILDENDD----FTIDSQTGVIRPNISFDREKQESYTFYV 664
Query: 77 QDEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFS----VPEGQDGLAVGRVHATDA 128
+ E G SS+A V I V D+ND P F PY +S +P G V +V A D
Sbjct: 665 KAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPSTNPGTVVFQVIAVDN 724
Query: 129 DEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D G NA V YS+ D+ F +D TG+I + D L L RV +
Sbjct: 725 DTGMNAEVRYSIVGGNTRDL-FAIDQETGNITLMEKCDV--TDLGLHRVLV 772
>gi|18027280|gb|AAL55729.1|AF277053_1 protocadherin-PC [Homo sapiens]
Length = 1037
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 77/162 (47%), Gaps = 26/162 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------------ 77
G+ LM+V ATD DSG + Y L DA F+LD T ++
Sbjct: 503 GIQLMKVSATDADSGPNAEINYLL---GPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLF 559
Query: 78 -----DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--QDGLAVGRVHATDA 128
D G L+S TV + + D ND +P F Y+F VPE + G VG + TD
Sbjct: 560 TILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPENLPRHG-TVGLITVTDP 618
Query: 129 DEGQNAVVYYSV-PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D G N+ V S+ E+ F +D+ TG IR N + D EKQ+ Y
Sbjct: 619 DYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESY 660
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 10/98 (10%)
Query: 78 DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
++GG SSTA + + VTD ND +P F+ E S+PE G +V ++HATDAD G+N
Sbjct: 243 EDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGEN 302
Query: 134 AVVYYSVPEDIP------FVVDANTGDIRTNKALDYEK 165
A +++S + F ++A TG I + LD E+
Sbjct: 303 AKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREE 340
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+ +A + I+V D ND P F S+PE G+ + +V ATDAD G NA + Y +
Sbjct: 467 LNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLL 526
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLYL 170
D P F +D TG + K LD EK+ YL
Sbjct: 527 GPDAPPEFSLDRRTGMLTVVKKLDREKEDKYL 558
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 71/171 (41%), Gaps = 34/171 (19%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP---------------I 76
T+ + TD D G V +LD N D F +D T P +
Sbjct: 609 TVGLITVTDPDYGDNSAVTLSILDENDD----FTIDSQTGVIRPNISFDREKQESYTFYV 664
Query: 77 QDEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFS----VPEGQDGLAVGRVHATDA 128
+ E G SS+A V I V D+ND P F PY +S +P G V +V A D
Sbjct: 665 KAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPSTNPGTVVFQVIAVDN 724
Query: 129 DEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D G NA V YS+ D+ F +D TG+I + D L L RV +
Sbjct: 725 DTGMNAEVRYSIVGGNTRDL-FAIDQETGNITLMEKCDV--TDLGLHRVLV 772
>gi|47216301|emb|CAF96597.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2244
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 72/143 (50%), Gaps = 15/143 (10%)
Query: 35 QVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTD 94
+V D+DSG L + LD+ T F L T+H+ + ++ VNI+V D
Sbjct: 1503 EVFVVDRDSGALKL--QKSLDHETTKWYQFLLHSQTKHEN-----FDIVASVIVNIQVKD 1555
Query: 95 INDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV-----PEDIP--F 146
+ND P F+S PYE V E G V +V A+D D G N V YS+ E+I F
Sbjct: 1556 VNDNKPVFESDPYEAVVVENLPSGTQVIQVRASDQDSGTNGQVIYSLDARQSSEEISELF 1615
Query: 147 VVDANTGDIRTNKALDYEKQQLY 169
V++ TG + T K LD EK Q Y
Sbjct: 1616 AVNSETGWVTTLKELDREKMQRY 1638
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 83/164 (50%), Gaps = 22/164 (13%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDN----------NTDAASYFNLDPAT--EHQGP 75
E+ + + KATD D G +G + Y+++++ N + + +LD E P
Sbjct: 1260 EIYTPVAEAKATDADEGIYGQIRYQIVNDFAKDKFSVNENGEIFTLESLDRENNMEKVVP 1319
Query: 76 I----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADE 130
I +D GG VN+ +TDIND P+F++ Y+ ++ + G +V R+ A+D DE
Sbjct: 1320 ISLVARDGGGKVGFCVVNVILTDINDNAPQFRAADYKSTIASDVPRGTSVVRISASDLDE 1379
Query: 131 GQNAVVYYSVPEDIP-----FVVDANTGDIRTNKALDYEKQQLY 169
G NA + YS+ D+ F + +G I T ++L + +LY
Sbjct: 1380 GSNADIEYSIEADVENVEENFEIHPTSGLIVTKESLIGLENELY 1423
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 25/171 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y A + +G L++V+A +D+ G + Y ++ N F++DP T IQ
Sbjct: 1990 YTATVSEDVSVGTQLLRVQAASRDTEANGEISYGIISGNEHG--LFSVDPRTGDIFVIQP 2047
Query: 78 ---------------DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
+GG LS ATVNI +TD+ND P F Y V E + G
Sbjct: 2048 LDYEASHEYYITVEATDGGSPPLSDMATVNINLTDVNDNRPVFSQDVYTAVVSEDAELGK 2107
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQ 166
V V+A D D ++ V YS+ + PF +D+ G+++ LD E++
Sbjct: 2108 TVITVNAEDLDGPSHSHVRYSIVDGNQGSPFTIDSARGELKVAHQLDRERE 2158
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 23/174 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G ++QV A D D+G V ++L++ +++ +F +D T
Sbjct: 1042 YHANVSEASVVGTRILQVDAKDSDTGNNQEVFFQLVEEKGESSDFFTIDRDTGTISTAQL 1101
Query: 71 -------EHQGPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
+H+ ++ D G LSS V I VTD+ND PEF Y ++ E G
Sbjct: 1102 LDYEEIRQHELRVRAVDRGVPALSSEVIVTIDVTDLNDNAPEFTQQTYNSTISELAPRGH 1161
Query: 119 AVGRVHATDAD--EGQNAVVYY-SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ +V A+DAD + N + ++ S ED+ F +D +TG I + Q Y
Sbjct: 1162 FITQVQASDADSSDKDNLLFFFTSGNEDLNFSIDKHTGAILISNHRRVHMQPFY 1215
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVY 137
+G ++ ATV ++V D ND +P+ + Y SVPE G + +V A+DAD NA ++
Sbjct: 1756 DGIFTAKATVEVKVLDANDNSPQCEKALYSESVPENSPAGRLILQVSASDADIRSNAQIF 1815
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQ 167
Y + F +D++TG+++T + LD E+Q+
Sbjct: 1816 YELQGAGSELFTIDSDTGELKTLQPLDREEQE 1847
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-------LDNNTDAASYFNLDP-----ATEHQGPIQ 77
G ++QV A+D D + Y L ++D L P EH+ ++
Sbjct: 1795 GRLILQVSASDADIRSNAQIFYELQGAGSELFTIDSDTGELKTLQPLDREEQEEHRFKMR 1854
Query: 78 --DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNA 134
D GG A +++ V D+ND P+F + Y +V E + G V ++ A D D G N+
Sbjct: 1855 AVDGGGRYCEADIHVVVEDVNDNLPQFSADLYTVTVFENTEIGTYVAKLLANDVDVGPNS 1914
Query: 135 VVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
+ YS+ + D F +D TG I + LD E Q Y R
Sbjct: 1915 NIIYSLLDSADGFFSIDEQTGVISLERPLDRELQSTYELRAL 1956
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 11/101 (10%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ--DGLAVGR------VHATDADEG 131
GL + T+ + + D ND P F + V E + + + R V A+DAD
Sbjct: 497 AGLGTNTTLLVHLKDENDNAPIFIQKEFRGVVSESAPVNSVVLTRENTPLVVRASDADGD 556
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
QNA++ Y + E F +D+NTG IR ALDYE++ +
Sbjct: 557 QNAMLIYQIVEPFAHNYFAIDSNTGAIRITTALDYEERNTF 597
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 75/175 (42%), Gaps = 28/175 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
+L Y A+ + E G + QV A D+D G+ ++Y L ++ +F + P+ E
Sbjct: 837 NLPYHALVQMDAEEGHLIRQVTAVDRDMGQNAEIQYLLKEHQ----EFFQISPSGEISLK 892
Query: 76 -----------------IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
QD G + +A V + VT +N P F+ Y +PE Q
Sbjct: 893 KKLQKESLNTDFVIVVVAQDNGNPALSAEVEVPVTVVNKAMPAFEKAFYTIEIPENIQLH 952
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
V V A ++ EG V Y++ E P F +D NTG I + LD+E Y
Sbjct: 953 TPVLHVQANNS-EGPRIV--YTISEGDPFKQFSIDFNTGVIHVIQPLDFETHPAY 1004
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS 139
G S V+I + D+ND P F S Y +V E G + +V A D+D G N V++
Sbjct: 1016 GAHSDVFVDIILEDVNDNAPVFLSKAYHANVSEASVVGTRILQVDAKDSDTGNNQEVFFQ 1075
Query: 140 VPEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
+ E+ F +D +TG I T + LDYE+ + + RV + +
Sbjct: 1076 LVEEKGESSDFFTIDRDTGTISTAQLLDYEEIRQHELRVRAVDR 1119
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 68/174 (39%), Gaps = 22/174 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGK------------FGLVEYRLLDNNTDAASYFN 65
FY + G ++Q+ A+D+D F L ++RL +
Sbjct: 214 FYEVNVAEDTPPGTEVLQISASDRDEKNKLTFTLLSSTDPFSLRKFRLDPGTGTLYTAET 273
Query: 66 LDPATEHQGPI------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
LD T H + QD + V + V D ND P F P+ V E G
Sbjct: 274 LDHETMHHHILTVMVRDQDIPVKRNLVRVIVNVDDTNDNAPWFVGAPFSGRVFESAAVGS 333
Query: 119 AVGRVHATDADEGQNAVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLY 169
AV +V A D D+G+NA V YS+ F +D G I K LD + + Y
Sbjct: 334 AVLQVTARDKDKGRNAEVVYSLESGNFANTFSIDPKLGTITVAKELDRDSKAQY 387
Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNAVVYYSVPEDIPF 146
+ + V D ND P F +LPY V + ++G + +V A D D GQNA + Y + E F
Sbjct: 821 LTVMVEDANDNRPMFVNLPYHALVQMDAEEGHLIRQVTAVDRDMGQNAEIQYLLKEHQEF 880
Query: 147 VVDANTGDIRTNKALDYEKQQLYLERVFLI 176
+ +G+I K L +K+ L + V ++
Sbjct: 881 FQISPSGEISLKKKL--QKESLNTDFVIVV 908
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 71/175 (40%), Gaps = 26/175 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y + E+G + ++ A D D G + Y LLD+ A +F++D T
Sbjct: 1885 LYTVTVFENTEIGTYVAKLLANDVDVGPNSNIIYSLLDS---ADGFFSIDEQTGVISLER 1941
Query: 71 ----------EHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E + D+G LSS V + V DIND P F+ Y +V E G
Sbjct: 1942 PLDRELQSTYELRALASDQGLPRLSSVCQVVVSVLDINDNPPVFEHREYTATVSEDVSVG 2001
Query: 118 LAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ RV A D N + Y + E F VD TGDI + LDYE Y
Sbjct: 2002 TQLLRVQAASRDTEANGEISYGIISGNEHGLFSVDPRTGDIFVIQPLDYEASHEY 2056
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 23/163 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----EHQGPIQDEGGL--- 82
G +++++ A+D D G +EY + + + F + P + + I E L
Sbjct: 1366 GTSVVRISASDLDEGSNADIEYSIEADVENVEENFEIHPTSGLIVTKESLIGLENELYAF 1425
Query: 83 ------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
S VNIR+ P+F Y ++V E G + + A A
Sbjct: 1426 FVRAKDTGNPPQHSVVQVNIRIVAPETPIPKFNEAQYRYTVAEDLPIGTEIDVIQAESAQ 1485
Query: 130 EGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
++V S PE D FVVD ++G ++ K+LD+E + Y
Sbjct: 1486 PLIYSLVKGSTPESNADEVFVVDRDSGALKLQKSLDHETTKWY 1528
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEGQNAVVYYSVPE 142
+ A V I VTD+ND P F YE +V G+ V +++ATD+D G NA + S+ E
Sbjct: 615 TAANVTIEVTDVNDCPPVFSQKTYEATVITPTYKGVKVIQINATDSDSGPNAKLLLSISE 674
Query: 143 -DI--PFVVDANTGDI 155
+I F +D TG I
Sbjct: 675 GNIGDKFKMDPTTGII 690
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 68/163 (41%), Gaps = 28/163 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------E 71
+G ++QV A DKD G+ V Y L N A+ F++DP E
Sbjct: 331 VGSAVLQVTARDKDKGRNAEVVYSLESGN--FANTFSIDPKLGTITVAKELDRDSKAQYE 388
Query: 72 HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDA 128
D G LS+TA V I VT ++ P F + V E G V V A+
Sbjct: 389 LTVKASDNGVPPLSTTAPVRIAVTVSDNAAPRFTEREFSADVSESAHPGSFVALVTAS-- 446
Query: 129 DEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
Q++V Y +I F ++ N+G + T + LDYE Y
Sbjct: 447 --SQSSVFYQIKAGNINNAFDINPNSGVVVTQRPLDYETTAQY 487
Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDIPF 146
V IRV D N+ P+F YE +V E G V ++ A+D DE +N + + + PF
Sbjct: 196 VLIRVIDTNNHRPQFSEKFYEVNVAEDTPPGTEVLQISASDRDE-KNKLTFTLLSSTDPF 254
Query: 147 V-----VDANTGDIRTNKALDYEKQQLYLERVFL 175
+D TG + T + LD+E ++ V +
Sbjct: 255 SLRKFRLDPGTGTLYTAETLDHETMHHHILTVMV 288
Score = 35.4 bits (80), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 11/88 (12%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA--------VGRVHATDADEGQNA 134
S++ V ++V D ND P F Y+ +PE + V RV A+D D+G NA
Sbjct: 12 STSVRVIVQVLDENDNRPLFLEKIYKIKLPEREKPEKERAIKRDPVYRVIASDRDDGPNA 71
Query: 135 VVYYSVP---EDIPFVVDANTGDIRTNK 159
+ YS+ E+ F ++ TG + + K
Sbjct: 72 EISYSIEEGDENGKFFIEPKTGLVSSKK 99
>gi|311250317|ref|XP_003124097.1| PREDICTED: protocadherin beta-1-like [Sus scrofa]
Length = 818
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 74/173 (42%), Gaps = 37/173 (21%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP------------- 75
LG A D D G GL Y L A YF+L GP
Sbjct: 148 LGSRFPLQSAQDLDVGLNGLQNYTL-----SANEYFHLHTRFRSHGPKYAELVLDKPLDR 202
Query: 76 -IQDEGGL------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVG 121
+Q E L S TA + ++V D+ND P+F L Y VPE +G V
Sbjct: 203 EVQPEVNLTITAVDGGSPPKSGTAHIRVQVLDVNDHVPQFSRLVYRAQVPENSANGSLVA 262
Query: 122 RVHATDADEGQNAVVYYSV---PEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
V ATD DEG N + YS+ PE I F +D +TG++R ALD+E + Y
Sbjct: 263 TVTATDLDEGSNKAITYSLAQNPEVILQTFQIDPDTGEVRLRGALDFEVTETY 315
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 67/144 (46%), Gaps = 23/144 (15%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDI 95
VK T ++S + LV R LD + S +N+ GP LSS + + + DI
Sbjct: 394 VKPTFRNS--YSLVTDRRLDR--EDVSGYNITLVATDTGP----PTLSSETVIEVLIADI 445
Query: 96 NDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP--------- 145
ND P FQ Y +V E + +G+VHA D D G+NA V YS+ +P
Sbjct: 446 NDNPPVFQEDSYILTVRENNSPAVFIGKVHAEDLDLGENAQVTYSL---LPPKSGDLSVF 502
Query: 146 --FVVDANTGDIRTNKALDYEKQQ 167
++++ G + + +DYE Q
Sbjct: 503 AYISINSDNGKLYALRTMDYEAIQ 526
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 67/171 (39%), Gaps = 25/171 (14%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQ 73
L Y A + G + V ATD D G + Y L N F +DP T +
Sbjct: 245 LVYRAQVPENSANGSLVATVTATDLDEGSNKAITYSLAQNPEVILQTFQIDPDTGEVRLR 304
Query: 74 GPI--------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG---QD 116
G + D GGLS+ + V + V D+ND PE +PE Q
Sbjct: 305 GALDFEVTETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVTVSSVSSPLPEDSPLQT 364
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDA---NTGDIRTNKALDYE 164
+A+ V D G + + ED+PF V N+ + T++ LD E
Sbjct: 365 VVALFSVRDRDIRVGGKITCF--LKEDLPFAVKPTFRNSYSLVTDRRLDRE 413
>gi|158260375|dbj|BAF82365.1| unnamed protein product [Homo sapiens]
Length = 889
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 77/162 (47%), Gaps = 26/162 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------------ 77
G+ LM+V ATD DSG + Y L DA F+LD T ++
Sbjct: 503 GIQLMKVSATDADSGPNAEINYLL---GPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLF 559
Query: 78 -----DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--QDGLAVGRVHATDA 128
D G L+S TV + + D ND +P F Y+F VPE + G VG + TD
Sbjct: 560 TILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPENLPRHG-TVGLITVTDP 618
Query: 129 DEGQNAVVYYSV-PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D G N+ V S+ E+ F +D+ TG IR N + D EKQ+ Y
Sbjct: 619 DYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESY 660
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 10/98 (10%)
Query: 78 DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
++GG SSTA + + VTD ND +P F+ E S+PE G +V ++HATDAD G+N
Sbjct: 243 EDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGEN 302
Query: 134 AVVYYSVPEDIP------FVVDANTGDIRTNKALDYEK 165
A +++S + F ++A TG I + LD E+
Sbjct: 303 AKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREE 340
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+ +A + I+V D ND P F S+PE G+ + +V ATDAD G NA + Y +
Sbjct: 467 LNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLL 526
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLYL 170
D P F +D TG + K LD EK+ YL
Sbjct: 527 GPDAPPEFSLDRRTGMLTVVKKLDREKEDKYL 558
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 71/171 (41%), Gaps = 34/171 (19%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP---------------I 76
T+ + TD D G V +LD N D F +D T P +
Sbjct: 609 TVGLITVTDPDYGDNSAVTLSILDENDD----FTIDSQTGVIRPNISFDREKQESYTFYV 664
Query: 77 QDEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFS----VPEGQDGLAVGRVHATDA 128
+ E G SS+A V I V D+ND P F PY +S +P G V +V A D
Sbjct: 665 KAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPSTNPGTVVFQVIAVDN 724
Query: 129 DEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D G NA V YS+ D+ F +D TG+I + D L L RV +
Sbjct: 725 DTGMNAEVRYSIVGGNTRDL-FAIDQETGNITLMEKCDV--TDLGLHRVLV 772
>gi|7656967|ref|NP_055061.1| cadherin EGF LAG seven-pass G-type receptor 1 precursor [Homo
sapiens]
gi|22095551|sp|Q9NYQ6.1|CELR1_HUMAN RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 1;
AltName: Full=Cadherin family member 9; AltName:
Full=Flamingo homolog 2; Short=hFmi2; Flags: Precursor
gi|7407148|gb|AAF61930.1|AF231024_1 protocadherin Flamingo 2 [Homo sapiens]
Length = 3014
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 24/174 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA------------ASYFNL 66
Y R+ E+G ++ ++A+D+DS + YR+L D + +
Sbjct: 358 YRERVRENLEVGYEVLTIRASDRDSPINANLRYRVLGGAWDVFQLNESSGVVSTRAVLDR 417
Query: 67 DPATEHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-- 118
+ A E+Q ++ + G LS+TATV I V D ND P+F Y VPE GL
Sbjct: 418 EEAAEYQLLVEANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNYVVQVPE-DVGLNT 476
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLY 169
AV RV ATD D+GQNA ++YS+ F + + +G + LD+E Q Y
Sbjct: 477 AVLRVQATDRDQGQNAAIHYSILSGNVAGQFYLHSLSGILDVINPLDFEDVQKY 530
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQ-- 73
+G +++ ++A D+D+ ++ Y+L NT + LD E Q
Sbjct: 702 VGSSVLTLQARDRDANS--VITYQLTGGNTRNRFALSSQRGGGLITLALPLDYKQEQQYV 759
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G S TA V I VTD N P FQS Y SV E + G ++ + A D D G
Sbjct: 760 LAVTASDGTRSHTAHVLINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATLSANDEDTG 819
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + +P F +D ++G + T LDYE Q Y
Sbjct: 820 ENARITYVIQDPVPQFRIDPDSGTMYTMMELDYENQVAY 858
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 39/180 (21%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN--------LDP-----ATEHQGP 75
L +++V+ATD+D G+ + Y +L N Y + ++P ++
Sbjct: 474 LNTAVLRVQATDRDQGQNAAIHYSILSGNVAGQFYLHSLSGILDVINPLDFEDVQKYSLS 533
Query: 76 IQDEGG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
I+ + G ++S+ V+++V D+ND P F S P++ +V E G V + A DAD
Sbjct: 534 IKAQDGGRPPLINSSGVVSVQVLDVNDNEPIFVSSPFQATVLENVPLGYPVVHIQAVDAD 593
Query: 130 EGQNAVVYYSVPE--------------------DIPFVVDANTGDIRTNKALDYEKQQLY 169
G+NA ++Y + + D PF + ++G I LD E+ + Y
Sbjct: 594 SGENARLHYRLVDTASTFLGGGSAGPKNPAPTPDFPFQIHNSSGWITVCAELDREEVEHY 653
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 73/167 (43%), Gaps = 33/167 (19%)
Query: 32 TLMQVKATDKDSGKFGLVEY------------------------RLLDNNTDAASYFNLD 67
+++QV ATD+DSG G + Y R LD + A Y
Sbjct: 910 SILQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRE-NVAVYNLWA 968
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
A + P LS++ + + + DIND P F+ E V E G V ++ A
Sbjct: 969 LAVDRGSPTP----LSASVEIQVTILDINDNAPMFEKDELELFVEENNPVGSVVAKIRAN 1024
Query: 127 DADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
D DEG NA + Y + E D+ F +D GD+R LD+E ++ Y+
Sbjct: 1025 DPDEGPNAQIMYQIVEGDMRHFFQLDLLNGDLRAMVELDFEVRREYV 1071
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y + +G ++ + A D+D+G+ + Y + D F +DP +
Sbjct: 791 SSHYTVSVSEDRPVGTSIATLSANDEDTGENARITYVI----QDPVPQFRIDPDSGTMYT 846
Query: 71 ------EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E+Q QD G S T T+ I + D ND P+F Y+ S+ E
Sbjct: 847 MMELDYENQVAYTLTIMAQDNGIPQKSDTTTLEILILDANDNAPQFLWDFYQGSIFEDAP 906
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ +V ATD D G N + Y+ D F ++ +G IRT + LD E +Y
Sbjct: 907 PSTSILQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRENVAVY 964
>gi|109506494|ref|XP_001056051.1| PREDICTED: protocadherin beta-11 [Rattus norvegicus]
gi|109507205|ref|XP_001065373.1| PREDICTED: protocadherin beta-11 [Rattus norvegicus]
gi|149017306|gb|EDL76357.1| rCG49392 [Rattus norvegicus]
Length = 802
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 75/175 (42%), Gaps = 20/175 (11%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------ 68
D +FY + LG ++ A+D DSG G + Y + D F ++
Sbjct: 243 DQMFYEVRIPENSRLGSLIITASASDLDSGTNGELSYAFSHASEDIRKTFAINKNSGEIS 302
Query: 69 --------ATEHQGPI---QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG 117
TE I D GGL +TV I+V D+ND PE + +PE
Sbjct: 303 LIGYLDFETTESYSIIIKATDRGGLFGKSTVRIQVMDVNDNFPEIAVSSFVSPIPENAVE 362
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIPFVVDA---NTGDIRTNKALDYEKQQLY 169
V D D G+N+ + S+PED+PFV+ + N + T +ALD E + Y
Sbjct: 363 TLVMIFSIQDKDSGENSKMVCSIPEDLPFVLKSSIENYYHLETERALDRENRAEY 417
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 11/109 (10%)
Query: 76 IQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
+ D+G L++ T+ ++V+DIND P F Y V E L +G + ATD+D G
Sbjct: 423 VSDQGTPRLTTQHTITVQVSDINDNAPAFTQTSYTMFVHENNSPALHIGTISATDSDSGS 482
Query: 133 NAVVYYSV--PEDIPFVVD------ANTGDIRTNKALDYEKQQLYLERV 173
NA + YS+ P D +D A+ G + +ALDYE Q + RV
Sbjct: 483 NAHITYSLMPPRDPQLALDSLISINADNGQLFALRALDYEALQAFEFRV 531
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS-- 139
S TA V + V D ND +PEF + YE +PE G + A+D D G N + Y+
Sbjct: 223 SGTALVQVEVIDANDNSPEFDQMFYEVRIPENSRLGSLIITASASDLDSGTNGELSYAFS 282
Query: 140 -VPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
EDI F ++ N+G+I LD+E + Y
Sbjct: 283 HASEDIRKTFAINKNSGEISLIGYLDFETTESY 315
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 76/187 (40%), Gaps = 35/187 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL---------LDN----NTDAASYFN 65
Y + + + + + ATD DSG + Y L LD+ N D F
Sbjct: 456 YTMFVHENNSPALHIGTISATDSDSGSNAHITYSLMPPRDPQLALDSLISINADNGQLFA 515
Query: 66 LDP-------ATEHQGPIQDEG--GLSSTATVNIRVTDINDKNP------EFQSLPYEFS 110
L A E + D G LSS A V + V D ND P + S PY
Sbjct: 516 LRALDYEALQAFEFRVGATDRGSPALSSQALVRVVVLDDNDNAPFVLYPLQNASAPYTEL 575
Query: 111 VPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL---DY 163
+P + G V +V A D D GQNA + + + E F V A+ G++RT + L D
Sbjct: 576 LPRAAEPGYLVTKVVAVDRDSGQNAWLSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDV 635
Query: 164 EKQQLYL 170
K +L L
Sbjct: 636 PKHRLLL 642
>gi|119593834|gb|EAW73428.1| cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog,
Drosophila), isoform CRA_a [Homo sapiens]
Length = 3014
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 24/174 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA------------ASYFNL 66
Y R+ E+G ++ ++A+D+DS + YR+L D + +
Sbjct: 358 YRERVRENLEVGYEVLTIRASDRDSPINANLRYRVLGGAWDVFQLNESSGVVSTRAVLDR 417
Query: 67 DPATEHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-- 118
+ A E+Q ++ + G LS+TATV I V D ND P+F Y VPE GL
Sbjct: 418 EEAAEYQLLVEANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNYVVQVPE-DVGLNT 476
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLY 169
AV RV ATD D+GQNA ++YS+ F + + +G + LD+E Q Y
Sbjct: 477 AVLRVQATDRDQGQNAAIHYSILSGNVAGQFYLHSLSGILDVINPLDFEDVQKY 530
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQ-- 73
+G +++ ++A D+D+ ++ Y+L NT + LD E Q
Sbjct: 702 VGSSVLTLQARDRDANS--VITYQLTGGNTRNRFALSSQRGGGLITLALPLDYKQEQQYV 759
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G S TA V I VTD N P FQS Y SV E + G ++ + A D D G
Sbjct: 760 LAVTASDGTRSHTAHVLINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATLSANDEDTG 819
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + +P F +D ++G + T LDYE Q Y
Sbjct: 820 ENARITYVIQDPVPQFRIDPDSGTMYTMMELDYENQVAY 858
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 39/180 (21%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN--------LDP-----ATEHQGP 75
L +++V+ATD+D G+ + Y +L N Y + ++P ++
Sbjct: 474 LNTAVLRVQATDRDQGQNAAIHYSILSGNVAGQFYLHSLSGILDVINPLDFEDVQKYSLS 533
Query: 76 IQDEGG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
I+ + G ++S+ V+++V D+ND P F S P++ +V E G V + A DAD
Sbjct: 534 IKAQDGGRPPLINSSGVVSVQVLDVNDNEPIFVSSPFQATVLENVPLGYPVVHIQAVDAD 593
Query: 130 EGQNAVVYYSVPE--------------------DIPFVVDANTGDIRTNKALDYEKQQLY 169
G+NA ++Y + + D PF + ++G I LD E+ + Y
Sbjct: 594 SGENARLHYRLVDTASTFLGGGSAGPKNPAPTPDFPFQIHNSSGWITVCAELDREEVEHY 653
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 73/167 (43%), Gaps = 33/167 (19%)
Query: 32 TLMQVKATDKDSGKFGLVEY------------------------RLLDNNTDAASYFNLD 67
+++QV ATD+DSG G + Y R LD + A Y
Sbjct: 910 SILQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRE-NVAVYNLWA 968
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
A + P LS++ + + + DIND P F+ E V E G V ++ A
Sbjct: 969 LAVDRGSPTP----LSASVEIQVTILDINDNAPMFEKDELELFVEENNPVGSVVAKIRAN 1024
Query: 127 DADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
D DEG NA + Y + E D+ F +D GD+R LD+E ++ Y+
Sbjct: 1025 DPDEGPNAQIMYQIVEGDMRHFFQLDLLNGDLRAMVELDFEVRREYV 1071
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y + +G ++ + A D+D+G+ + Y + D F +DP +
Sbjct: 791 SSHYTVSVSEDRPVGTSIATLSANDEDTGENARITYVI----QDPVPQFRIDPDSGTMYT 846
Query: 71 ------EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E+Q QD G S T T+ I + D ND P+F Y+ S+ E
Sbjct: 847 MMELDYENQVAYTLTIMAQDNGIPQKSDTTTLEILILDANDNAPQFLWDFYQGSIFEDAP 906
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ +V ATD D G N + Y+ D F ++ +G IRT + LD E +Y
Sbjct: 907 PSTSILQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRENVAVY 964
>gi|148703183|gb|EDL35130.1| mCG142341 [Mus musculus]
Length = 2317
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 83/172 (48%), Gaps = 26/172 (15%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLD 67
A + H +G + V A D+D+ GL+ Y + N + A + +
Sbjct: 1001 ATIPESHSIGSVVRTVSARDRDTAMNGLISYNITSGNEEGIFAINSSTGVVTLAKALDYE 1060
Query: 68 PATEHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEF---SVPEGQDGLAV 120
+++H+ I D G ++ T ++ + V D+ND +P F +P EF + G V
Sbjct: 1061 MSSKHEMTISATDGGWVARTGYCSLTVSVIDVNDNSPVF--VPDEFFPTVMENAPSGTTV 1118
Query: 121 GRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ATDAD G NAV+ Y+V D+ FV+D N G I T LD+E +Q Y
Sbjct: 1119 IHLNATDADSGANAVIAYTVQSSDSDL-FVIDPNMGVITTQGFLDFETKQSY 1169
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 22/161 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ V ATDKDSG G ++Y +++ N +++ F ++ AT I+
Sbjct: 592 ILTVSATDKDSGPNGQLDYEIVNGNQESS--FTINHATGEIRSIRPLDREKISHYELTVK 649
Query: 78 --DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQN 133
D+G S + +V I + D ND P F + + G V RV +D D G N
Sbjct: 650 SSDKGSPSQSTSVKVIISILDENDNAPRFSQIFSAYVSENSPLGYTVTRVTTSDEDIGIN 709
Query: 134 AVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
A+ YS+ + +PF ++ NTGDI ++ L+ E Y RV
Sbjct: 710 AISRYSIVDTSLPFTINPNTGDIVISRPLNREDTDRYRIRV 750
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 22/168 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--- 72
S + A + LG T+ +V +D+D G + Y ++D + F ++P T
Sbjct: 679 SQIFSAYVSENSPLGYTVTRVTTSDEDIGINAISRYSIVDTSLP----FTINPNTGDIVI 734
Query: 73 QGPIQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
P+ E G + + V I VTDIND P F Y PE + G
Sbjct: 735 SRPLNREDTDRYRIRVSAHDSGWTVSTDVTIFVTDINDNTPRFSRPSYYLDCPELPELGS 794
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
V +V ATD DEG N V+Y + F ++A TG+I + L Y+
Sbjct: 795 RVTQVSATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQVLKYQN 842
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 68/157 (43%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +ATD DSG +EY LL+ + + S +D G + D
Sbjct: 20 VFKAQATDPDSGPNSYIEYTLLNPSGNKFSIGTIDGEVHLTGELDREEVSNYSLTVVATD 79
Query: 79 EGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAV 135
+G LSS+ V + V DIND NP F Y + E G + +V A D DEG N
Sbjct: 80 KGQPPLSSSTEVVVMVLDINDNNPVFAQAMYRVQIKENILTGTDIIQVSAADNDEGTNGQ 139
Query: 136 VYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y + F +D+ TG I K+LD E Y
Sbjct: 140 VRYGIVGGNTHQEFRIDSVTGAITVAKSLDRETTPAY 176
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 77/172 (44%), Gaps = 36/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G T++ + ATD DSG ++ Y + +++D F +DP + G I +G L
Sbjct: 1115 GTTVIHLNATDADSGANAVIAYTVQSSDSD---LFVIDP---NMGVITTQGFLDFETKQS 1168
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
S ATV+I++ N+ P F S Y F V E G AVG V A+
Sbjct: 1169 YHLTVKAFNVPDEEKCSFATVDIQLKGTNEYVPRFVSKLYYFEVSEAASRGTAVGEVFAS 1228
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D D G + V+Y + F ++ TG I + LD EK+ ERV L
Sbjct: 1229 DRDMGADGEVHYLIFGNSRKKGFQINKMTGQIYVSGLLDREKE----ERVSL 1276
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 77/159 (48%), Gaps = 22/159 (13%)
Query: 28 ELGVTLMQVKATD-KDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQGPI 76
++G L++V A D KD G VEY + LDN+T S + + +Q +
Sbjct: 902 KVGTKLIKVTAVDDKDFGLNSEVEYFVSDGNHLGKFKLDNDTGWISIASSLVSDLNQNFL 961
Query: 77 -----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+D+G LSS A V+I VT+ N PEF ++PE G V V A D
Sbjct: 962 IRVTAKDKGNPPLSSQAVVHITVTEENYHTPEFSQNHISATIPESHSIGSVVRTVSARDR 1021
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYE 164
D N ++ Y++ E+ F ++++TG + KALDYE
Sbjct: 1022 DTAMNGLISYNITSGNEEGIFAINSSTGVVTLAKALDYE 1060
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV- 140
SS ++I V DIND P F+ P+ + E + V ATD D G N + Y +
Sbjct: 554 FSSYEKLDITVLDINDNAPTFEEDPFVSEILENLSPRKILTVSATDKDSGPNGQLDYEIV 613
Query: 141 --PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ F ++ TG+IR+ + LD EK Y
Sbjct: 614 NGNQESSFTINHATGEIRSIRPLDREKISHY 644
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYS- 139
L+ T T+NI V DIND P F + Y S+ E + G V V+A+DAD NAV+ YS
Sbjct: 247 LTGTGTINIIVDDINDNVPTFANNMYLTSIAEDARTGTDVLLVNASDADAAANAVISYSI 306
Query: 140 VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ + F ++ +TG I T+ LD E + Y
Sbjct: 307 IGGNSQFTINPSTGQIITSALLDRETKDNY 336
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 92 VTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
+TD+ND P FQ PY +P G V V TDAD G N+ ++YS+
Sbjct: 361 ITDVNDNPPRFQHHPYVTHIPSPTPPGSFVFAVTVTDADIGSNSELHYSL 410
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 44/115 (38%), Gaps = 21/115 (18%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD---------- 67
Y ++ G ++QV A D D G G V Y ++ NT F +D
Sbjct: 109 MYRVQIKENILTGTDIIQVSAADNDEGTNGQVRYGIVGGNTHQE--FRIDSVTGAITVAK 166
Query: 68 -------PATEHQGPIQDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPE 113
PA D G T TV I + D+ND P F+ PY +VPE
Sbjct: 167 SLDRETTPAYTLTVQATDRGSSPRTDSCTVAITLLDMNDFVPVFELSPYSVNVPE 221
>gi|355785087|gb|EHH65938.1| hypothetical protein EGM_02811, partial [Macaca fascicularis]
Length = 988
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 88/186 (47%), Gaps = 30/186 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA------------ASYFNL 66
Y R+ E+G ++ ++A+D+DS + YR+L D + +
Sbjct: 23 YRERVRENLEVGYEVLTIRASDRDSPVNANLRYRVLGGAWDVFQLNESSGVVSTRAVLDR 82
Query: 67 DPATEHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-- 118
+ A E+Q ++ + G LS+TATV I V D ND P+F Y VPE GL
Sbjct: 83 EEAAEYQLLVEANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNYVVQVPEDV-GLNT 141
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
AV RV ATD D+GQNA ++YS+ + N+ + + + LD E +F+ S
Sbjct: 142 AVLRVQATDRDQGQNAAIHYSILSGL-----INSSGVVSVQVLDVNDN----EPIFVSSP 192
Query: 179 FATSYL 184
F + L
Sbjct: 193 FQATVL 198
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 17/156 (10%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQGP 75
+G +++ ++A D+D+ ++ Y+L NT + LD E Q
Sbjct: 324 VGSSVLTLQARDRDANS--VITYQLTGGNTRNRFALSSQRGGGLITLALPLDYKQEQQYV 381
Query: 76 IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNA 134
+G S TA V I VTD N P FQS Y SV E + G ++ + A D D G+NA
Sbjct: 382 TASDGTRSHTAHVLINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATLSANDEDTGENA 441
Query: 135 VVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+ Y + + +P F +D ++G + T LDYE Q Y
Sbjct: 442 RITYVIQDPVPQFRIDPDSGTMYTMMELDYENQVAY 477
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
FY + +++QV ATD+DSG G + Y + ++ ++P + G I+
Sbjct: 515 FYQGSIFEDAPPSTSILQVSATDRDSGPNGRLLYTFQGGDDGDGDFY-IEPTS---GVIR 570
Query: 78 --------------------DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
D G LS++ + + + DIND P F+ E V E
Sbjct: 571 TQRRLDRENVAVYNLWALAVDRGSPTPLSASVEIQVTILDINDNAPMFEKDELELFVEEN 630
Query: 115 QD-GLAVGRVHATDADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
G V ++ A D DEG NA + Y + E D+ F +D GD+R LD+E ++ Y+
Sbjct: 631 NPVGSVVAKIRANDPDEGPNAQIMYQIVEGDMRHFFQLDLLNGDLRAMVELDFEVRREYV 690
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 25/113 (22%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATV 88
L +++V+ATD+D G+ + Y +L G ++S+ V
Sbjct: 139 LNTAVLRVQATDRDQGQNAAIHYSIL------------------------SGLINSSGVV 174
Query: 89 NIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
+++V D+ND P F S P++ +V E G V + A DAD G+NA ++Y +
Sbjct: 175 SVQVLDVNDNEPIFVSSPFQATVLENVPLGYPVVHIQAVDADSGENARLHYRL 227
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y + +G ++ + A D+D+G+ + Y + D F +DP +
Sbjct: 410 SSHYTVSVSEDRPVGTSIATLSANDEDTGENARITYVI----QDPVPQFRIDPDSGTMYT 465
Query: 71 ------EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E+Q QD G S T T+ I + D ND P+F Y+ S+ E
Sbjct: 466 MMELDYENQVAYTLTIMAQDNGIPQKSDTTTLEILILDANDNAPQFLWDFYQGSIFEDAP 525
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ +V ATD D G N + Y+ D F ++ +G IRT + LD E +Y
Sbjct: 526 PSTSILQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRENVAVY 583
>gi|119593835|gb|EAW73429.1| cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog,
Drosophila), isoform CRA_b [Homo sapiens]
Length = 3019
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 24/174 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA------------ASYFNL 66
Y R+ E+G ++ ++A+D+DS + YR+L D + +
Sbjct: 358 YRERVRENLEVGYEVLTIRASDRDSPINANLRYRVLGGAWDVFQLNESSGVVSTRAVLDR 417
Query: 67 DPATEHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-- 118
+ A E+Q ++ + G LS+TATV I V D ND P+F Y VPE GL
Sbjct: 418 EEAAEYQLLVEANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNYVVQVPE-DVGLNT 476
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLY 169
AV RV ATD D+GQNA ++YS+ F + + +G + LD+E Q Y
Sbjct: 477 AVLRVQATDRDQGQNAAIHYSILSGNVAGQFYLHSLSGILDVINPLDFEDVQKY 530
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQ-- 73
+G +++ ++A D+D+ ++ Y+L NT + LD E Q
Sbjct: 702 VGSSVLTLQARDRDANS--VITYQLTGGNTRNRFALSSQRGGGLITLALPLDYKQEQQYV 759
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G S TA V I VTD N P FQS Y SV E + G ++ + A D D G
Sbjct: 760 LAVTASDGTRSHTAHVLINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATLSANDEDTG 819
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + +P F +D ++G + T LDYE Q Y
Sbjct: 820 ENARITYVIQDPVPQFRIDPDSGTMYTMMELDYENQVAY 858
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 39/180 (21%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN--------LDP-----ATEHQGP 75
L +++V+ATD+D G+ + Y +L N Y + ++P ++
Sbjct: 474 LNTAVLRVQATDRDQGQNAAIHYSILSGNVAGQFYLHSLSGILDVINPLDFEDVQKYSLS 533
Query: 76 IQDEGG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
I+ + G ++S+ V+++V D+ND P F S P++ +V E G V + A DAD
Sbjct: 534 IKAQDGGRPPLINSSGVVSVQVLDVNDNEPIFVSSPFQATVLENVPLGYPVVHIQAVDAD 593
Query: 130 EGQNAVVYYSVPE--------------------DIPFVVDANTGDIRTNKALDYEKQQLY 169
G+NA ++Y + + D PF + ++G I LD E+ + Y
Sbjct: 594 SGENARLHYRLVDTASTFLGGGSAGPKNPAPTPDFPFQIHNSSGWITVCAELDREEVEHY 653
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 73/167 (43%), Gaps = 33/167 (19%)
Query: 32 TLMQVKATDKDSGKFGLVEY------------------------RLLDNNTDAASYFNLD 67
+++QV ATD+DSG G + Y R LD + A Y
Sbjct: 910 SILQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRE-NVAVYNLWA 968
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
A + P LS++ + + + DIND P F+ E V E G V ++ A
Sbjct: 969 LAVDRGSPTP----LSASVEIQVTILDINDNAPMFEKDELELFVEENNPVGSVVAKIRAN 1024
Query: 127 DADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
D DEG NA + Y + E D+ F +D GD+R LD+E ++ Y+
Sbjct: 1025 DPDEGPNAQIMYQIVEGDMRHFFQLDLLNGDLRAMVELDFEVRREYV 1071
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y + +G ++ + A D+D+G+ + Y + D F +DP +
Sbjct: 791 SSHYTVSVSEDRPVGTSIATLSANDEDTGENARITYVI----QDPVPQFRIDPDSGTMYT 846
Query: 71 ------EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E+Q QD G S T T+ I + D ND P+F Y+ S+ E
Sbjct: 847 MMELDYENQVAYTLTIMAQDNGIPQKSDTTTLEILILDANDNAPQFLWDFYQGSIFEDAP 906
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ +V ATD D G N + Y+ D F ++ +G IRT + LD E +Y
Sbjct: 907 PSTSILQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRENVAVY 964
>gi|41223270|emb|CAD92434.1| protocadherin [Homo sapiens]
Length = 787
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 77/162 (47%), Gaps = 26/162 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------------ 77
G+ LM+V ATD DSG + Y L DA F+LD T ++
Sbjct: 302 GIQLMKVSATDADSGPNAEINYLL---GPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLF 358
Query: 78 -----DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--QDGLAVGRVHATDA 128
D G L+S TV + + D ND +P F Y+F VPE + G VG + TD
Sbjct: 359 TILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPENLPRHG-TVGLITVTDP 417
Query: 129 DEGQNAVVYYSV-PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D G N+ V S+ E+ F +D+ TG IR N + D EKQ+ Y
Sbjct: 418 DYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESY 459
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 10/98 (10%)
Query: 78 DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
++GG SSTA + + VTD ND +P F+ E S+PE G +V ++HATDAD G+N
Sbjct: 42 EDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGEN 101
Query: 134 AVVYYSVPEDIP------FVVDANTGDIRTNKALDYEK 165
A +++S + F ++A TG I + LD E+
Sbjct: 102 AKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREE 139
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+ +A + I+V D ND P F S+PE G+ + +V ATDAD G NA + Y +
Sbjct: 266 LNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLL 325
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLYL 170
D P F +D TG + K LD EK+ YL
Sbjct: 326 GPDAPPEFSLDRRTGMLTVVKKLDREKEDKYL 357
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 71/171 (41%), Gaps = 34/171 (19%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP---------------I 76
T+ + TD D G V +LD N D F +D T P +
Sbjct: 408 TVGLITVTDPDYGDNSAVTLSILDENDD----FTIDSQTGVIRPNISFDREKQESYTFYV 463
Query: 77 QDEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFS----VPEGQDGLAVGRVHATDA 128
+ E G SS+A V I V D+ND P F PY +S +P G V +V A D
Sbjct: 464 KAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPSTNPGTVVFQVIAVDN 523
Query: 129 DEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D G NA V YS+ D+ F +D TG+I + D L L RV +
Sbjct: 524 DTGMNAEVRYSIVGGNTRDL-FAIDQETGNITLMEKCDV--TDLGLHRVLV 571
>gi|345319681|ref|XP_003430184.1| PREDICTED: cadherin-23 [Ornithorhynchus anatinus]
Length = 2471
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 77/160 (48%), Gaps = 27/160 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD------------PATEHQG--- 74
G ++QV+A+D+D G L+ Y + N D F +D P E Q
Sbjct: 880 GTAVVQVRASDRDIGLNSLLSYYITRGNEDMT--FRIDRVTGEIATRPSPPDRERQSFYH 937
Query: 75 ---PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATD 127
++DEG LS+T V + V D ND P FQ YE S+ EG D L ++ V A D
Sbjct: 938 LVVTVEDEGTPALSATTPVYVTVLDENDNAPVFQQQHYEVSLDEGPDTLNASLITVRALD 997
Query: 128 ADEGQNAVVYYSVPED---IPFVVDANTGDIRTNKALDYE 164
DEG N V Y++ + F +D+ TG I T K LDYE
Sbjct: 998 WDEGPNGSVIYAIIQGNIINTFHIDSATGLISTMKELDYE 1037
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 60/108 (55%), Gaps = 8/108 (7%)
Query: 62 SYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-V 120
+++NL +G LSST V +RV DIND +P +LP S+ E + V
Sbjct: 1106 AFYNLTICARDRG----TPALSSTILVGVRVLDINDNDPVLLNLPLNVSISENSPVSSFV 1161
Query: 121 GRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEK 165
+HA+DAD G+NA++ +++ D F+++A TG + N+ LD E+
Sbjct: 1162 AHIHASDADSGRNALLTFNLTAGNRDRAFLINATTGVVSVNRPLDRER 1209
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVP 141
+S+ATV + + D+ND +P FQ+LP VPEG G +V +V A D DEG N +V Y +
Sbjct: 303 TSSATVFVNLLDLNDNDPTFQNLPSVAEVPEGIPAGSSVFQVVAVDLDEGLNGLVTYRMQ 362
Query: 142 EDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
+P F +++++G + + LD E+ Y RV
Sbjct: 363 VGMPRMDFSINSSSGLVLSAVVLDRERIAEYFLRV 397
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 74/161 (45%), Gaps = 21/161 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL------LDNNTDAASYFNLDPATEHQGPI------- 76
G ++ QV A D D G GLV YR+ +D + +++S L + I
Sbjct: 338 GSSVFQVVAVDLDEGLNGLVTYRMQVGMPRMDFSINSSSGLVLSAVVLDRERIAEYFLRV 397
Query: 77 --QDEGGLS--STATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEG 131
D G S ST+T+ +RV D+ND+ P F Y S+PE V R++ TD D G
Sbjct: 398 VASDAGTPSKTSTSTLTVRVLDVNDETPTFFPAIYNVSLPEDVPRDFRVARLNCTDNDVG 457
Query: 132 QNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
NA + Y + +D F V G +RT +LD E Y
Sbjct: 458 LNAELSYFITGGNQDGKFSVGYRDGVVRTVVSLDRETTATY 498
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 77/170 (45%), Gaps = 37/170 (21%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------ 76
LG L+ V ATD DSG F L++Y L D F +DP+T G I
Sbjct: 1714 LGTVLLTVTATDADSGPFALIQYSL----GDGEGKFGIDPST---GDIFVLSALDREKKD 1766
Query: 77 ---------QDEGGLSS-----TATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVG 121
+ G +SS + V I V D+ND P+F + SV E + +G +V
Sbjct: 1767 HYILTAVARDNPGDVSSNRRENSVQVVITVLDVNDCRPQFSRGQFSTSVYENEPEGTSVI 1826
Query: 122 RVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKAL-DYEKQQL 168
+ ATD DEG N V Y++ P F + ++G + T + L YE+ L
Sbjct: 1827 SMVATDQDEGDNGEVVYTMDGPGVEAFQIHQDSGLVTTRRPLQSYERFNL 1876
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 30/166 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLD-------------------NNT---DAASYFNLD 67
G TL+ V A D D G G + Y LL+ N T + + N
Sbjct: 1609 GTTLISVAAVDPDKGANGQITYTLLNLVPPGYAQLEDDSTGKVIANRTVDYEEVQWLNFT 1668
Query: 68 -PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHA 125
A+++ P + ++ V + + D+ND NP F Y+ V E G + V A
Sbjct: 1669 VRASDNGSPPR-----AAEIPVYLEIVDVNDNNPVFGQAAYQIPVLEDVPLGTVLLTVTA 1723
Query: 126 TDADEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYL 170
TDAD G A++ YS+ + + F +D +TGDI ALD EK+ Y+
Sbjct: 1724 TDADSGPFALIQYSLGDGEGKFGIDPSTGDIFVLSALDREKKDHYI 1769
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 70/175 (40%), Gaps = 40/175 (22%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------EHQGPIQ 77
G +++QV A+DKDSG G + YR+ + A F + P T E Q +
Sbjct: 1376 GFSILQVTASDKDSGPNGQLSYRI---ESGAQDRFLIHPVTGLVRVGDATIDREEQDAYR 1432
Query: 78 ------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDA 128
D G LS TA V I + DIND PEF SVPE G V V A D
Sbjct: 1433 LTVVAVDRGTTPLSGTAVVTILIDDINDSRPEFLDPVQTVSVPESASPGTVVAEVPAIDR 1492
Query: 129 DEGQNAVVYYSV--------------PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D N + Y + +D F V+A TG + L+ E Y
Sbjct: 1493 D--LNPQLEYHIVSIVAKDDTDHLVTEQDQAFAVNAETGYVLVKSPLNRELVATY 1545
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV 140
+ TATV + V D+ND P F YE SVPE + ++ ++ ATDADEG+ V+Y +
Sbjct: 515 TGTATVYVTVLDVNDNRPIFLQSSYEASVPEDIPEASSIVQLKATDADEGEYGRVWYRI 573
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 63/149 (42%), Gaps = 20/149 (13%)
Query: 37 KATDKDSGKFGLVEYRL--------LDNNTDAASYF-NLDPATEHQGPI----QDEGGLS 83
+ATD D G +G V Y LD +T LD T + + +D GG
Sbjct: 91 QATDNDVGSYGKVSYFFSDDPDRFSLDKDTGVIILIARLDFETTQRYTLTVIARDGGGEE 150
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSVPE 142
+T V + V D+ND P FQ Y ++ E + + + R+ ATD D N + YS+
Sbjct: 151 TTGRVRVNVLDVNDNVPTFQKDSYLGALRENEPSITQLVRLRATDEDSPPNNQIAYSIVN 210
Query: 143 DIPFVVDANT------GDIRTNKALDYEK 165
F N G I + LDYE+
Sbjct: 211 ASAFGSYFNINVYEGYGVISVSHPLDYEQ 239
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 8/89 (8%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD---GLAVGRVHATDADEGQNAVVYYSVP--- 141
+ + + D+ND P +S P+ ++V ++ G AV +V A+D D G N+++ Y +
Sbjct: 849 LRVTILDVNDNPPVIES-PFGYNVTVNENVGGGTAVVQVRASDRDIGLNSLLSYYITRGN 907
Query: 142 EDIPFVVDANTGDIRTNKA-LDYEKQQLY 169
ED+ F +D TG+I T + D E+Q Y
Sbjct: 908 EDMTFRIDRVTGEIATRPSPPDRERQSFY 936
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 68/170 (40%), Gaps = 39/170 (22%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------------ 77
G +++ + ATD+D G G V Y + +A + P+Q
Sbjct: 1822 GTSVISMVATDQDEGDNGEVVYTMDGPGVEAFQIHQDSGLVTTRRPLQSYERFNLTVVAT 1881
Query: 78 DEGG--LSSTATVNIRVTDINDKNPE---------FQSLPYEFSVPEGQDGLAVGRVHAT 126
D G L T+ + + V D+N+ Q +P SV E V+AT
Sbjct: 1882 DRGQPPLWGTSMLLVEVIDVNESRASIIWPSGPCLLQEIPLRSSVYE---------VYAT 1932
Query: 127 DADEGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYEKQQLY 169
D DEG N V YS + F +D +G I+T + LD EKQ +Y
Sbjct: 1933 DRDEGLNGAVRYSFLKTGAGNKDWEYFSIDPISGLIQTAQRLDREKQAMY 1982
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 70/170 (41%), Gaps = 26/170 (15%)
Query: 36 VKATDKDSGKFGLVEYRLL--------------------DNNTDAASYFNLDPATEHQGP 75
++A DKD G +V Y LL D + D ++ P E
Sbjct: 1276 IRAFDKDLGVNAVVTYTLLGEQSHLFDISRSTGIVVVRPDTDLDREAF--TPPHLELLLL 1333
Query: 76 IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNA 134
+D G L+STA ++I + D ND P F + E G ++ +V A+D D G N
Sbjct: 1334 AEDVGLLNSTAELHISILDDNDNQPIFSPAALTVRLLENSPPGFSILQVTASDKDSGPNG 1393
Query: 135 VVYYSVPEDIP--FVVDANTGDIRTNKA-LDYEKQQLYLERVFLISKFAT 181
+ Y + F++ TG +R A +D E+Q Y V + + T
Sbjct: 1394 QLSYRIESGAQDRFLIHPVTGLVRVGDATIDREEQDAYRLTVVAVDRGTT 1443
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVG----RVHATDADEGQNAVVYYS--- 139
TVNI D+ND P+F+ + + +G G V A D D+G N + Y+
Sbjct: 1577 TVNI--LDVNDNTPQFRPFGITYFMERVLEGATPGTTLISVAAVDPDKGANGQITYTLLN 1634
Query: 140 -VPEDIPFVVDANTGDIRTNKALDYEKQQ 167
VP + D +TG + N+ +DYE+ Q
Sbjct: 1635 LVPPGYAQLEDDSTGKVIANRTVDYEEVQ 1663
Score = 35.8 bits (81), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIR 91
+++Q+KATD D G++G V YR++ N+ + +L +GP + +S+ + +
Sbjct: 552 SIVQLKATDADEGEYGRVWYRIISGNSHSQFRIHLSNGLLVRGPRPLDRERNSSHVLEVE 611
Query: 92 VTDINDKNPEFQS--LPYEFSVPEG 114
+ D+ P S +P S P G
Sbjct: 612 AYN-RDQGPMRSSVRVPLRLSPPPG 635
>gi|41223266|emb|CAD92432.1| protocadherin [Homo sapiens]
Length = 841
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 77/162 (47%), Gaps = 26/162 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------------ 77
G+ LM+V ATD DSG + Y L DA F+LD T ++
Sbjct: 302 GIQLMKVSATDADSGPNAEINYLL---GPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLF 358
Query: 78 -----DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--QDGLAVGRVHATDA 128
D G L+S TV + + D ND +P F Y+F VPE + G VG + TD
Sbjct: 359 TILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPENLPRHG-TVGLITVTDP 417
Query: 129 DEGQNAVVYYSV-PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D G N+ V S+ E+ F +D+ TG IR N + D EKQ+ Y
Sbjct: 418 DYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESY 459
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 10/98 (10%)
Query: 78 DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
++GG SSTA + + VTD ND +P F+ E S+PE G +V ++HATDAD G+N
Sbjct: 42 EDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGEN 101
Query: 134 AVVYYSVPEDIP------FVVDANTGDIRTNKALDYEK 165
A +++S + F ++A TG I + LD E+
Sbjct: 102 AKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREE 139
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+ +A + I+V D ND P F S+PE G+ + +V ATDAD G NA + Y +
Sbjct: 266 LNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLL 325
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLYL 170
D P F +D TG + K LD EK+ YL
Sbjct: 326 GPDAPPEFSLDRRTGMLTVVKKLDREKEDKYL 357
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 71/171 (41%), Gaps = 34/171 (19%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP---------------I 76
T+ + TD D G V +LD N D F +D T P +
Sbjct: 408 TVGLITVTDPDYGDNSAVTLSILDENDD----FTIDSQTGVIRPNISFDREKQESYTFYV 463
Query: 77 QDEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFS----VPEGQDGLAVGRVHATDA 128
+ E G SS+A V I V D+ND P F PY +S +P G V +V A D
Sbjct: 464 KAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPSTNPGTVVFQVIAVDN 523
Query: 129 DEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D G NA V YS+ D+ F +D TG+I + D L L RV +
Sbjct: 524 DTGMNAEVRYSIVGGNTRDL-FAIDQETGNITLMEKCDV--TDLGLHRVLV 571
>gi|355749624|gb|EHH54023.1| hypothetical protein EGM_14759, partial [Macaca fascicularis]
Length = 1346
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 77/172 (44%), Gaps = 30/172 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN--NTDAASYFNLDPATEHQGPI 76
Y A + +G +QV A+D DSG +G +EY L D + +A F +DP H G I
Sbjct: 663 YNATIAEHAPVGHCFLQVTASDADSGLYGFIEYSLYDGFLSYEAPQAFRIDP---HDGRI 719
Query: 77 ---------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EG 114
+D GGLS+ A V + + D+ND +P F Y S+ E
Sbjct: 720 CVSQDIDRERDPATYDLLVKAKDGGGLSAQAFVRVDLEDVNDNHPVFNPSTYVTSISGET 779
Query: 115 QDGLAVGRVHATDADEG-QNAVVYYSVPEDIP--FVVDANTGDIRTNKALDY 163
Q G + V ATD D G V Y +P D+ F +D+ TG I L +
Sbjct: 780 QPGTEIINVLATDRDSGIYGTVAYELIPGDVSSLFSIDSTTGIIYLTSPLSH 831
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 62/139 (44%), Gaps = 22/139 (15%)
Query: 35 QVKATDKDSGKFGLVEYRLLDN--------NTDAASYFNLDPATEHQGPIQ------DEG 80
++ A D D G+ G + Y LL + NT + SY ++P H G Q D G
Sbjct: 1207 KITAIDMDYGRNGQLLYFLLSDGRFFKMNPNTGSTSY-TIEPNYYHLGHHQMTVLVTDRG 1265
Query: 81 GLSSTAT--VNIRVTDINDKNPEF-QSLP---YEFSVPEGQD-GLAVGRVHATDADEGQN 133
AT V + VTDIND P F Q LP V EGQ + V V A D DEG N
Sbjct: 1266 SPPRNATMVVYVSVTDINDNRPFFPQCLPGKELHVKVLEGQPVKMLVTTVFAKDPDEGNN 1325
Query: 134 AVVYYSVPEDIPFVVDANT 152
A V YSV P + T
Sbjct: 1326 AEVIYSVSSARPMPLKGKT 1344
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 18/110 (16%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEG--QNAVVYY 138
LS+ T+ +RV D+ND+ P F Y+ SV E G AV V A+DADE ++A + Y
Sbjct: 519 LSTEETLLLRVADLNDQPPLFSQQHYKASVSEAAAPGTAVMWVSASDADEAGTEHAWLRY 578
Query: 139 SV--------PEDIP-------FVVDANTGDIRTNKALDYEKQQLYLERV 173
++ PE +P F +D +G I T + LD E Q+ RV
Sbjct: 579 TLVQLSAPCNPEALPAAECGPSFAIDPESGVISTIRTLDREVQEAVELRV 628
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 67/162 (41%), Gaps = 30/162 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE---HQGPI---------- 76
G ++ V ATD+DSG +G V Y L+ D +S F++D T P+
Sbjct: 782 GTEIINVLATDRDSGIYGTVAYELIPG--DVSSLFSIDSTTGIIYLTSPLSHLESTTLSL 839
Query: 77 ----QDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEF----SVPEGQDGLAVGRVHAT 126
QD GGL++ A V I + EF+ Y F VPE +G V A
Sbjct: 840 MVSAQDSGGLTAVINAEVTIHIFQTTLAPAEFERPKYTFLVYEDVPEDS---PIGTVKAR 896
Query: 127 DADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQ 166
+ + Y D+ F + G IRT K LD+E Q
Sbjct: 897 EPLNSSEPIFYRISSGDLGGKFSIHPWLGTIRTRKPLDHETQ 938
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 45/99 (45%), Gaps = 16/99 (16%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV-PEDI 144
+V +RV D ND P F+ Y +V E Q G V RV ATD D G N V YS+ +
Sbjct: 281 SVELRVLDENDNPPVFEQDEYRAAVREDAQLGAEVCRVRATDRDLGPNGFVRYSIRARQV 340
Query: 145 P--------------FVVDANTGDIRTNKALDYEKQQLY 169
P F V+ +G +R + LD E Q +
Sbjct: 341 PGAGSGGGALGDAAYFAVEELSGVVRLRRPLDREAQAWH 379
Score = 42.4 bits (98), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPE 142
S+ VNI V D+ND +P F E + + Q G A+ A D D G+N ++ YS+
Sbjct: 956 SSTEVNITVLDVNDNHPAFLRTSDEIRISQTTQPGTALYLARAEDRDSGRNGLLRYSIAS 1015
Query: 143 DIP--FVVDANTGDIRTNKALDY-EKQQLYL 170
P F +D G + N +L E+++L L
Sbjct: 1016 PQPGVFAIDRALGVLFLNGSLGAGERRELTL 1046
Score = 35.4 bits (80), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 57/146 (39%), Gaps = 34/146 (23%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT----------DAASYF---N 65
Y A R+ +LG + +V+ATD+D G G V Y + A+YF
Sbjct: 301 YRAAVREDAQLGAEVCRVRATDRDLGPNGFVRYSIRARQVPGAGSGGGALGDAAYFAVEE 360
Query: 66 LDPATEHQGPIQDE-------------GGLS---STATVNIRVTDINDKNPEFQSLPYE- 108
L + P+ E GG+ +T V+I V D+ND P L
Sbjct: 361 LSGVVRLRRPLDREAQAWHQLVVEARDGGVEPEVATVRVSIAVLDVNDNRPAIHVLFLTE 420
Query: 109 ---FSVPEG-QDGLAVGRVHATDADE 130
V EG + G V RV +DAD
Sbjct: 421 GGLACVSEGARPGDYVARVSVSDADR 446
>gi|432858179|ref|XP_004068831.1| PREDICTED: cadherin-22-like [Oryzias latipes]
Length = 803
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 79/169 (46%), Gaps = 32/169 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-----------Q 77
+G ++M+V A+D D +G R++ + D +F +D H G I Q
Sbjct: 175 IGTSVMKVTASDADDPTYG-SSARVVYSVLDGERFFTVD---RHTGIIMTAVADLDRETQ 230
Query: 78 DE--------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR 122
D GGLS + TV I +TD+ND P F Y+FSV EG G VGR
Sbjct: 231 DRYELVVKATDMAGQMGGLSGSTTVTIVITDVNDNPPRFPQKMYQFSVSEGAAVGTPVGR 290
Query: 123 VHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
V ATDAD G+N + Y + E T D+ T +A+ K+QL E
Sbjct: 291 VIATDADMGENTDMSYLIREGGELF--KVTTDVETQEAVVAIKKQLDFE 337
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPE-DI 144
I+V DIND P+F PY SV E G +V +V A+DAD+ G +A V YSV + +
Sbjct: 148 IKVQDINDSEPQFLEGPYIGSVAELSPIGTSVMKVTASDADDPTYGSSARVVYSVLDGER 207
Query: 145 PFVVDANTGDIRTNKA-LDYEKQQLY 169
F VD +TG I T A LD E Q Y
Sbjct: 208 FFTVDRHTGIIMTAVADLDRETQDRY 233
>gi|395736272|ref|XP_003776724.1| PREDICTED: protocadherin beta-13 [Pongo abelii]
Length = 781
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 19/171 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY + +G +++V ATD D+G G + Y L + + F ++P T
Sbjct: 247 FYRVQISEDSPVGFLVVKVSATDADTGVNGEISYSLFQASDEIGKTFKINPLTGEIELKK 306
Query: 71 ----------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
E +D G S TV I+V D+ND PE + +PE V
Sbjct: 307 QLDFEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVV 366
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDA--NTGDIRTNKALDYEKQQLY 169
+D D G+N + S+ ED+PF++ + N + T + LD E + Y
Sbjct: 367 ALFSVSDLDSGENGKISCSIQEDLPFLLKSAENFYTLLTERPLDRESRAEY 417
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
S TA V I V D+ND PEF+ Y + E G V +V ATDAD G N + YS+
Sbjct: 224 SGTAQVYIEVLDVNDNAPEFEQPFYRVQISEDSPVGFLVVKVSATDADTGVNGEISYSLF 283
Query: 141 --PEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
++I F ++ TG+I K LD+EK Q Y
Sbjct: 284 QASDEIGKTFKINPLTGEIELKKQLDFEKLQSY 316
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L + + + V D+ND P F Y V E L +G V ATD D G NA V YS+
Sbjct: 431 LKTQLNMTVLVADVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSL 490
Query: 141 --PED--IPFV----VDANTGDIRTNKALDYEKQQLYLERV 173
P+D +P ++A+ G + ++LDYE Q + RV
Sbjct: 491 LPPQDPHLPLASLVSINADKGHLFALRSLDYEALQAFEFRV 531
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 76/185 (41%), Gaps = 36/185 (19%)
Query: 9 ALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL-------------D 55
A TS +LF R+ + + + V ATD+DSG V Y LL
Sbjct: 450 AFTQTSYTLF----VRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVS 505
Query: 56 NNTDAASYFNLDP-------ATEHQGPIQDEG--GLSSTATVNIRVTDINDKNP------ 100
N D F L A E + D G LSS A V + V D ND +P
Sbjct: 506 INADKGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVRVLVLDANDNSPFVLYPL 565
Query: 101 EFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIR 156
+ S P VP + G V +V A D D GQNA + Y + E F V A+ G++R
Sbjct: 566 QNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVR 625
Query: 157 TNKAL 161
T + L
Sbjct: 626 TARLL 630
>gi|10433211|dbj|BAB13935.1| unnamed protein product [Homo sapiens]
Length = 744
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 19/171 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY + +G +++V ATD D+G G + Y L + + F ++P T
Sbjct: 247 FYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKK 306
Query: 71 ----------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
E +D G S TV I+V D+ND PE + +PE V
Sbjct: 307 QLDFEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVV 366
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDA--NTGDIRTNKALDYEKQQLY 169
+D D G+N + S+ ED+PF++ + N + T + LD E + Y
Sbjct: 367 ALFSVSDLDSGENGKISCSIQEDLPFLLKSAENFYTLLTERPLDRESRAEY 417
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
S TA V I V D+ND PEF+ Y + E G V +V ATD D G N + YS+
Sbjct: 224 SGTAQVYIEVLDVNDNAPEFEQPFYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLF 283
Query: 141 --PEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
E+I F ++ TG+I K LD+EK Q Y
Sbjct: 284 QASEEIGKTFKINPLTGEIELKKQLDFEKLQSY 316
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L + + + + D+ND P F Y V E L + V ATD D G NA V YS+
Sbjct: 431 LITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVTYSL 490
Query: 141 PEDIPFVVDAN 151
V+DAN
Sbjct: 491 LPPRVVVLDAN 501
>gi|410910412|ref|XP_003968684.1| PREDICTED: protocadherin-16-like [Takifugu rubripes]
Length = 3253
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 81/163 (49%), Gaps = 24/163 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI------------- 76
L ++A D+D+G+ ++ Y++ + D A F+LD + P+
Sbjct: 1758 LFTLRANDQDTGESAIINYKI--SAGDLAGDFHLDRMSGVLSTSRPLDREMRTGYTLTIT 1815
Query: 77 -QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
QD+G LSS ATV + + DIND +P+F+S Y +PE G V V ATD DEG
Sbjct: 1816 AQDQGHPALSSIATVEVTILDINDHSPQFESSAYTADIPEDIPIGSHVLDVKATDLDEGP 1875
Query: 133 NAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
N+ V Y + F++D +TG I T LD EK Y +V
Sbjct: 1876 NSRVLYFMSSSSHSMFIIDQDTGSIITTAPLDREKIASYTFKV 1918
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 79/166 (47%), Gaps = 22/166 (13%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQ---- 73
+G + V ATD D G+ G V YR+ NT F+L+P T E Q
Sbjct: 1548 VGFVTLYVMATDADEGENGRVTYRIQSGNT--GGKFSLNPNTGSLSIFKPLDREDQDIFN 1605
Query: 74 -GPIQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDA 128
I ++ G+ SST + + V D+ND+ P F+ YE + E + G V V A+D
Sbjct: 1606 LTIIAEDHGIPQRSSTQLLCVHVIDVNDEVPWFEETQYEAQISENRPSGTEVLTVSASDL 1665
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
D+G N V Y + F ++ TG I T K+LD E Q+ Y V+
Sbjct: 1666 DQGPNGQVTYGGIAEKDFNINPVTGVITTTKSLDRELQEYYTVTVY 1711
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 69/159 (43%), Gaps = 26/159 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------EHQGP-- 75
G ++QV A DKD G G + Y L + +F++D T ++ P
Sbjct: 485 GSFVLQVTARDKDHGPNGDIAYSLFQDQGAYNKWFSIDSVTGIITTHSQLDYEKNPNPSI 544
Query: 76 --IQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
+ +GG LSSTA VNI + DIND P F+ Y S+ E G + V A DAD
Sbjct: 545 TVVATDGGKPPLSSTAVVNIVLQDINDNEPVFERNVYNVSIKENTAPGTCILEVTARDAD 604
Query: 130 EGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALD 162
G + YS+ I F + TG I T LD
Sbjct: 605 GGSFGSISYSLSSGIKSASPSQFTIGKETGQICTTAVLD 643
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 25/157 (15%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--- 77
A R+ + + A D D G FG ++Y +LD ++D F ++ + G ++
Sbjct: 2672 ASIRENKPQNALVTVLHAVDHDKGVFGQLKYYMLDKSSDGKETFFIN---QTSGEVRTRC 2728
Query: 78 -----------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
D G S+T TV + VT ++ +P F S + F VPEG + G
Sbjct: 2729 SFDFEKLNSFSFVAVAMDAGNYSATVTVQVYVTGEDEYDPVFTSSDFSFKVPEGAKKGQI 2788
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDI 155
+G+V A D D G + +V YS+ P F V+ ++G I
Sbjct: 2789 IGKVQAQDEDGGVDGIVLYSLVHASPYFEVNRSSGAI 2825
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 80/185 (43%), Gaps = 32/185 (17%)
Query: 11 EMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT 70
T D +F ++ G V ATD+DSG G + YR L + +F ++ T
Sbjct: 1106 RFTQDRVFMAV--KENMPAGSGFGHVSATDRDSGPNGRLSYRFLHPD----RHFQINSHT 1159
Query: 71 -----------EHQGP------IQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYE--- 108
E Q +QD G S+T T I V D ND +P F P
Sbjct: 1160 GEINTKTVLDREQQSSYQLIVLVQDGGSPPRSATGTAFITVLDDNDNDPAFTHSPSGKNL 1219
Query: 109 -FSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYE 164
V E Q G+ +G + A D DEG+N V+YS+ P F ++ N+G++ + AL +
Sbjct: 1220 ILQVTESQASGVLLGTLQAKDPDEGENGTVFYSLTGPRADRFSLNPNSGELHSASALSHS 1279
Query: 165 KQQLY 169
+ Y
Sbjct: 1280 DRAEY 1284
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 72/166 (43%), Gaps = 23/166 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA-SYFNLDPAT------- 70
Y ++ G +++V A D D G FG + Y L A+ S F + T
Sbjct: 581 YNVSIKENTAPGTCILEVTARDADGGSFGSISYSLSSGIKSASPSQFTIGKETGQICTTA 640
Query: 71 ---EHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGL 118
GP D GGLSS A V + V DIND P F + Y S+ + G
Sbjct: 641 VLDRDHGPASFDFTVTAVDGGGLSSVAYVKVDVVDINDNRPTFYPVNYAVSLSTQSAPGT 700
Query: 119 AVGRVHATDADEGQNA-VVYYSVPEDIP--FVVDANTGDIRTNKAL 161
+V RV A D D G+N + Y + P F ++ +TG I ++++
Sbjct: 701 SVVRVMAYDPDSGENGRITYKTAPGGASPYFTLNKDTGVISLSRSV 746
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 78/173 (45%), Gaps = 27/173 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------E 71
Y A + G ++ V A+D D G G V Y + A FN++P T
Sbjct: 1643 YEAQISENRPSGTEVLTVSASDLDQGPNGQVTYGGI-----AEKDFNINPVTGVITTTKS 1697
Query: 72 HQGPIQD---------EGGLS---STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
+Q+ +GGL + ATV IRV D ND P F L Y VPE D +
Sbjct: 1698 LDRELQEYYTVTVYAKDGGLPPNYAKATVRIRVLDENDNAPVFGRLYYNIEVPENLDAMP 1757
Query: 120 VGRVHATDADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLY 169
+ + A D D G++A++ Y + D+ F +D +G + T++ LD E + Y
Sbjct: 1758 LFTLRANDQDTGESAIINYKISAGDLAGDFHLDRMSGVLSTSRPLDREMRTGY 1810
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 82/183 (44%), Gaps = 33/183 (18%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDS---GKFGLVEYRLLDNNTDAASY-------- 63
D+L Y ++ + +QV+A ++++ G FG + Y L + DAA++
Sbjct: 999 DTLTYRVELKEGTPINKRFLQVRALNRETSGTGHFGPLSYHLRPDG-DAAAFGIASDSGW 1057
Query: 64 ----FNLDP-----------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYE 108
LD AT+ G ++ G +ATV I VTD ND +P F
Sbjct: 1058 LFVKSTLDREVKDMYLLTVLATQGHGQLKKTG----SATVRISVTDENDNSPRFTQDRVF 1113
Query: 109 FSVPEGQD-GLAVGRVHATDADEGQNAVVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQ 166
+V E G G V ATD D G N + Y + D F ++++TG+I T LD E+Q
Sbjct: 1114 MAVKENMPAGSGFGHVSATDRDSGPNGRLSYRFLHPDRHFQINSHTGEINTKTVLDREQQ 1173
Query: 167 QLY 169
Y
Sbjct: 1174 SSY 1176
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 58/118 (49%), Gaps = 18/118 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNN--------TDAASYFNLDPATEHQGP------ 75
G ++ V ATD+DSG G + YR++ + ++ + N A + + P
Sbjct: 2356 GSAVITVTATDRDSGDNGKITYRVMSSTKGIFYIDPSNGTLFANQRTAFDSENPSILVVI 2415
Query: 76 -IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
QD+G LSS ATV++ VTD+ND P F L Y S+ E G A+ + A D D
Sbjct: 2416 EAQDQGTPSLSSIATVHVHVTDVNDNAPIFHQLEYRASLSEDDVPGSAILTLEAVDGD 2473
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE--- 142
T+++ V DIND P F Y + E Q G + +V ATD DEG N V Y +
Sbjct: 237 TLDVTVQDINDNAPVFNQSRYHAIISENLQPGSNILQVFATDDDEGDNGKVLYEINRRQS 296
Query: 143 --DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F+VD +G I NK LD+E ++++
Sbjct: 297 DPDHYFLVDPQSGVITLNKPLDFEMRRVH 325
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 75/178 (42%), Gaps = 35/178 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y A R+ ++QV A D D G+ G V Y L ++ + F +DP T G I
Sbjct: 2140 YVAYIREAQGYDFPIIQVAAVDLDQGQNGQVIYSL--RSSSMSGLFKIDPLT---GSITT 2194
Query: 78 -------------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ- 115
D G L+ +AT+ + VTD+ND +P LP E VPE
Sbjct: 2195 AAIMDREIWTETKLVVTATDRGTPRLAGSATLTVIVTDLNDNSPMI-PLPQEIHVPENTL 2253
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
G + +V D D G ++Y++ D+ F + G + LDYE++ Y
Sbjct: 2254 IGTVITQVTGNDVDSG--PALFYTLTLDMNSRDMFGIHRYGGGVSLTGPLDYEERTWY 2309
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 88 VNIRVTDINDKNPEFQSLPYE-FSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV--PED 143
V+I +TDIND P F PYE +PE + G V RV A D D G N + + + P
Sbjct: 877 VHISITDINDNPPVFSPSPYESLLLPEHTEMGTVVYRVQAEDQDSGANGQLSFDLFSPSG 936
Query: 144 I--PFVVDANTGDIRTNKALDYEKQQLY 169
F +D ++G+IR +L+YE Y
Sbjct: 937 TQRTFSIDRSSGEIRLVGSLNYESTPRY 964
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPED 143
+ T + +TD ND P F+S P SV E Q G V ATDADEG+N V Y +
Sbjct: 1517 SVTARVYITDENDNPPVFRS-PASVSVMEDQPVGFVTLYVMATDADEGENGRVTYRIQSG 1575
Query: 144 I---PFVVDANTGDIRTNKALDYEKQQLY 169
F ++ NTG + K LD E Q ++
Sbjct: 1576 NTGGKFSLNPNTGSLSIFKPLDREDQDIF 1604
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
L + ++ I+VTD+ND P F Y +PE G V +V A D D G N + YS+
Sbjct: 449 LRAESSFIIQVTDVNDNPPLFDQPVYRQVIPEVVFPGSFVLQVTARDKDHGPNGDIAYSL 508
Query: 141 PED-----IPFVVDANTGDIRTNKALDYEK 165
+D F +D+ TG I T+ LDYEK
Sbjct: 509 FQDQGAYNKWFSIDSVTGIITTHSQLDYEK 538
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 61/146 (41%), Gaps = 24/146 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------- 71
Y A+ + + G ++QV ATD D G G V Y + +D YF +DP +
Sbjct: 257 YHAIISENLQPGSNILQVFATDDDEGDNGKVLYEINRRQSDPDHYFLVDPQSGVITLNKP 316
Query: 72 --------HQGPIQDEGGLS----STATVNIRVTDINDKNPE----FQSLPYEFSVPEG- 114
H+ +Q + + S A V I V D ND P F S V EG
Sbjct: 317 LDFEMRRVHELVVQAQDNATQPEVSNAFVTIHVRDYNDNQPTMTIIFLSEDGSPRVSEGA 376
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV 140
Q G V R+ TD D G+ A V S+
Sbjct: 377 QPGQYVARISVTDPDYGEYANVNVSL 402
Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 51/116 (43%), Gaps = 8/116 (6%)
Query: 59 DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
+A + +NL +G Q SS+ + I V D ND P F Y + EG G
Sbjct: 2523 EAVASYNLTVVVSDRGIPQR----SSSVLILISVLDTNDNPPAFSRAEYSVVLSEGVAAG 2578
Query: 118 LAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ + ATD D N V YS+ E F VD TG +R +AL E Q ++
Sbjct: 2579 TEILHLSATDPDSTPNGEVQYSICSGDETELFQVDRWTGALRLQRALGRESQSTHV 2634
Score = 42.4 bits (98), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 72/162 (44%), Gaps = 30/162 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G ++++V A D DSG+ G + Y+ A+ YF L+ T G I
Sbjct: 699 GTSVVRVMAYDPDSGENGRITYKTAPGG--ASPYFTLNKDT---GVISLSRSVFGKANSV 753
Query: 77 -------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHAT 126
QD GGL S A VNI V P F+ Y FS+ E G VG + A+
Sbjct: 754 IPMVISAQDGGGLVSLTNARVNISVVAGLVAPPVFEHAHYYFSIAEDVLRGTVVGIIQAS 813
Query: 127 DADEGQNAVVY-YSVPEDIPFV-VDANTGDIRTNKALDYEKQ 166
+ + Y S + + ++ VD +TG +RT+ LD+E Q
Sbjct: 814 VKTDSSRDISYTISSGDPVGYITVDPDTGALRTSLPLDHEAQ 855
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 69/160 (43%), Gaps = 27/160 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQG 74
G ++ + ATD DS G V+Y + D F +D T H
Sbjct: 2578 GTEILHLSATDPDSTPNGEVQYSICSG--DETELFQVDRWTGALRLQRALGRESQSTHVL 2635
Query: 75 PIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--QDGLAVGRVHATDADE 130
+Q D G + A V+I V DIND P F S+ E Q+ L V +HA D D+
Sbjct: 2636 IVQATDGQGQYALAPVSIEVKDINDNRPFFPLKLLTASIRENKPQNAL-VTVLHAVDHDK 2694
Query: 131 GQ-NAVVYYSVPEDI----PFVVDANTGDIRTNKALDYEK 165
G + YY + + F ++ +G++RT + D+EK
Sbjct: 2695 GVFGQLKYYMLDKSSDGKETFFINQTSGEVRTRCSFDFEK 2734
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 69/165 (41%), Gaps = 31/165 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLD---------------------NNTDAASYFNLDP 68
GV L ++A D D G+ G V Y L +++D A Y +
Sbjct: 1230 GVLLGTLQAKDPDEGENGTVFYSLTGPRADRFSLNPNSGELHSASALSHSDRAEYSLMVT 1289
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDA 128
AT+ P + S++ ++ ++V IN S+ + SV E G +G V
Sbjct: 1290 ATDRGQPPR-----STSCSLTVQVLSINRPPSSSHSITFN-SVEETAPGSVIGSVRHHGG 1343
Query: 129 DEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ ++ V Y+V D FVVD TGD+ + LDYE+ Y
Sbjct: 1344 EISKDGEVTYTVIGGTDSDGTFVVDRLTGDVFLARPLDYEQHSHY 1388
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
SS VN+ + D+ND P FQ Y + E Q + +V A D D+GQN V YS+
Sbjct: 2116 SSYMAVNLILQDVNDNLPRFQLQNYVAYIREAQGYDFPIIQVAAVDLDQGQNGQVIYSLR 2175
Query: 142 EDIP---FVVDANTGDIRTNKALDYE 164
F +D TG I T +D E
Sbjct: 2176 SSSMSGLFKIDPLTGSITTAAIMDRE 2201
Score = 39.7 bits (91), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 66/179 (36%), Gaps = 27/179 (15%)
Query: 4 CPIPSALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY 63
P+P + + ++L +G + QV D DSG L N+ D
Sbjct: 2240 IPLPQEIHVPENTL-----------IGTVITQVTGNDVDSGPALFYTLTLDMNSRDMFGI 2288
Query: 64 FNLDPATEHQGPIQDEGGLSSTATVN-------------IRVTDINDKNPEFQSLPYEFS 110
GP+ E T TV+ + V D+ND P F Y+ +
Sbjct: 2289 HRYGGGVSLTGPLDYEERTWYTVTVSTSDSKHHSEANLTVLVDDVNDNAPTFTQDVYQVT 2348
Query: 111 VPEG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQ 166
V E G AV V ATD D G N + Y V F +D + G + N+ ++ +
Sbjct: 2349 VSEHLPAGSAVITVTATDRDSGDNGKITYRVMSSTKGIFYIDPSNGTLFANQRTAFDSE 2407
Score = 35.8 bits (81), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVH----ATDADEGQNAVVYYSV 140
T V I+V DIND P+F F +PE A+G A DAD+GQ + Y +
Sbjct: 123 TVEVTIKVNDINDHAPKFPRKKATFRIPEQT---AIGTRFPLEPAVDADQGQLSTQGYLI 179
Query: 141 PE---DIPFVVDANTG-------DIRTNKALDYEKQQLY 169
+ F ++ G D+ N LD EK+ Y
Sbjct: 180 KDGNVGQAFTLETRRGTNGVLFLDLVVNTILDREKRSTY 218
>gi|344291677|ref|XP_003417560.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23-like [Loxodonta
africana]
Length = 2906
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 31/184 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
F A ++ +G + + A D D G+ G V Y +L N + A F LD ++
Sbjct: 1158 FPIAHVKEDATVGSVVHHIAAQDPDEGRNGRVTYSILSGNENMA--FVLDESSGLLTTTC 1215
Query: 71 --EHQGPIQ--------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+H+ Q D+G LSS+ T+ I V D+ND+ P F+ Y SV E Q+ G
Sbjct: 1216 PLDHEIQTQHILTLLALDDGRPALSSSQTLTITVLDVNDEAPVFKQHLYNASVKENQNPG 1275
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLE 171
V RV A D D G N+ + + + +P F ++ +TG++ T LD E Q+++
Sbjct: 1276 EFVTRVEAMDRDSGINSKLQFEI---LPGASFGLFEINPDTGEVVTTTTLDREXQEVFTL 1332
Query: 172 RVFL 175
RV +
Sbjct: 1333 RVLV 1336
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 73/162 (45%), Gaps = 31/162 (19%)
Query: 35 QVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQGPI--Q 77
++ A D+DSGK G + Y LL + +F ++P T HQ I
Sbjct: 747 KITAVDRDSGKNGRLSYFLLSD----GKFFKMNPNTGELISWVALDREGQAHHQVTILVT 802
Query: 78 DEGGLSSTAT--VNIRVTDINDKNPEF-QSLP---YEFSVPEGQD-GLAVGRVHATDADE 130
D G AT V I VTDIND P F Q LP V EGQ + V V A D DE
Sbjct: 803 DHGSPPQNATMVVYISVTDINDNKPYFPQCLPGKELHIKVLEGQPVNMLVTTVFAKDLDE 862
Query: 131 GQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
G N V YSV F +DAN+G+IRT L + + Y
Sbjct: 863 GNNGEVIYSVSSGDGSDHFKIDANSGEIRTATILSSDYRPSY 904
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 25/177 (14%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------ 70
L Y + R+ E G ++ + A D+D G+ G +EY L+D +A+ F +DP T
Sbjct: 1471 LRYQSSVREDTETGTVVLVLSAMDEDEGQNGQIEYFLMD---EASGAFAIDPVTGVLRTA 1527
Query: 71 ---------EHQGPI-----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYE-FSVPEGQ 115
+H + +G S+T +N+ VTD+ND +P ++ P++ F +
Sbjct: 1528 HTLDREARSQHTFRVVARDCSVQGSRSTTVIINVHVTDVNDNDPVWEQNPFDLFLSSQLP 1587
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLE 171
L + A D D G N V +S E F +D +TG+I+ + E ++L+
Sbjct: 1588 ANLTTATLRADDPDLGPNGTVVFSFAETQSMFSLDKHTGEIQLQQIPPSEYFPIWLQ 1644
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 73/163 (44%), Gaps = 30/163 (18%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------------- 82
V A+D D+G G V+Y ++D NT+ YF ++ E G + L
Sbjct: 1385 VLASDMDAGNNGAVKYYIIDGNTE--EYFAVN---ETSGELSTTRALDREQINNFTLVIL 1439
Query: 83 ---------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQ 132
SS + + V D ND +P F L Y+ SV E + G V + A D DEGQ
Sbjct: 1440 CSDLGDPPRSSVMQLQVTVLDDNDHSPSFLKLRYQSSVREDTETGTVVLVLSAMDEDEGQ 1499
Query: 133 NAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERV 173
N + Y + ++ F +D TG +RT LD E + + RV
Sbjct: 1500 NGQIEYFLMDEASGAFAIDPVTGVLRTAHTLDREARSQHTFRV 1542
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 28/172 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--FNLDPAT----- 70
Y A ++ G + +V+A D+DSG +++ +L AS+ F ++P T
Sbjct: 1263 LYNASVKENQNPGEFVTRVEAMDRDSGINSKLQFEILP----GASFGLFEINPDTGEVVT 1318
Query: 71 ------EHQGP------IQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
E Q ++D G LSST + V D ND PEF ++ VPE ++
Sbjct: 1319 TTTLDREXQEVFTLRVLVRDGGTPPLSSTTVILCTVEDENDHAPEFIVPWHDTDVPENRE 1378
Query: 117 GLAVGRVHATDADEGQN-AVVYYSVPEDIP--FVVDANTGDIRTNKALDYEK 165
+ V A+D D G N AV YY + + F V+ +G++ T +ALD E+
Sbjct: 1379 PEVIYTVLASDMDAGNNGAVKYYIIDGNTEEYFAVNETSGELSTTRALDREQ 1430
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 21/167 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA---------------S 62
Y + + E G +++ VKA DS ++Y + N D
Sbjct: 1678 LYEGLVTENCEAGTSIVTVKAFTPDSIGDS-IKYLIFSGNEDGVFSLCSNSGELTVKEPK 1736
Query: 63 YFNLDPATEHQGPI-QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-V 120
+ + + E Q + ++GG + + V + + D+ND P F+ Y SV EGQ A V
Sbjct: 1737 FLDFEVRNEVQLIVLAEKGGQRAYSKVAVLIQDVNDNLPCFEKSVYHASVSEGQLYDAHV 1796
Query: 121 GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
+V A D D G N ++ YS+ + F +DA +G I TN LDYE
Sbjct: 1797 IQVFAADPDSGLNGLLEYSILSGNQGDAFQIDALSGVITTNTILDYE 1843
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---PEDIPF 146
+ + D+ND +P F S P + G V + A D DEG+N V YS+ E++ F
Sbjct: 1143 VVILDVNDHSPTFVSFPIAHVKEDATVGSVVHHIAAQDPDEGRNGRVTYSILSGNENMAF 1202
Query: 147 VVDANTGDIRTNKALDYEKQQLYL 170
V+D ++G + T LD+E Q ++
Sbjct: 1203 VLDESSGLLTTTCPLDHEIQTQHI 1226
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 25/162 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAAS------YFNLDPAT-------------EH 72
T+ V A D D+G +G + Y +L F +DP T E
Sbjct: 2325 TICSVNALDFDTGPYGELTYSILSPCLSTHGQPHDHDLFLIDPFTGDIYAKQILDYELES 2384
Query: 73 QGPI----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATD 127
+ I +D+G L+++ T+ + + I++ P F Y F++P + + +G+V A+D
Sbjct: 2385 KYCITVQAKDKGDLTASLTMWLEIEGIDEFEPIFTQDQYFFNLPYKSEVRQLIGKVEASD 2444
Query: 128 ADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEKQQL 168
AD G + V+ YS+ PF V+ G+I +AL K Q+
Sbjct: 2445 ADAGIDGVILYSLATASPFFSVNKTNGNIYLTRALPLVKSQV 2486
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 68/164 (41%), Gaps = 30/164 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G ++ ATDKDSG +G V Y L+ D +S F +D T G I
Sbjct: 322 GTEIISTLATDKDSGVYGTVAYELVPG--DLSSLFTIDSTT---GIIYLTSTLSHLESTT 376
Query: 77 -------QDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHAT 126
+D GGL+S A V I + + EF+ Y FSV E +G VG V A
Sbjct: 377 LLLMVCARDGGGLTSAINADVTIHIVPTSLAPAEFERSKYTFSVCEDVPEGSPVGTVKAG 436
Query: 127 DADEGQNAVVYY--SVPEDIPFVVDANTGDIRTNKALDYEKQQL 168
+ + Y S D F + G I T K LD+E Q +
Sbjct: 437 EPLNSTEPIFYRITSGNLDAKFSIHPWLGIICTQKPLDHETQPM 480
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 61/124 (49%), Gaps = 12/124 (9%)
Query: 49 VEYRLLDNNTD---AASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSL 105
V Y +L ++ D AAS+ + A++H P LSST ++I V D+ND P+F L
Sbjct: 2152 VGYLVLLHSLDREAAASHQLVILASDHGCP-----PLSSTTIISIEVLDVNDNPPKFTHL 2206
Query: 106 PYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKAL 161
Y E G + V A D+D G NA + Y S E F ++ TG + K L
Sbjct: 2207 EYHTHFKESTPLGTHIIVVSANDSDMGSNAEIMYHLISGNERGHFHLEEKTGVLYLIKPL 2266
Query: 162 DYEK 165
DYE+
Sbjct: 2267 DYEE 2270
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNAVVY 137
+GGLS+ A V + + D+ND P F Y S+ + Q G + ATD D G V
Sbjct: 283 KGGLSAQAFVRVELEDMNDNRPVFNPSTYVTSISGQTQPGTEIISTLATDKDSGVYGTVA 342
Query: 138 YS-VPEDIP--FVVDANTGDIRTNKALDY 163
Y VP D+ F +D+ TG I L +
Sbjct: 343 YELVPGDLSSLFTIDSTTGIIYLTSTLSH 371
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 70/183 (38%), Gaps = 32/183 (17%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI 76
L Y ++ LG ++ V A D D G + Y L+ N +F+L+ T I
Sbjct: 2206 LEYHTHFKESTPLGTHIIVVSANDSDMGSNAEIMYHLISGNERG--HFHLEEKTGVLYLI 2263
Query: 77 Q------------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ +E S A V + V D ND P+F VPE
Sbjct: 2264 KPLDYEETTKFTLIVQASDEEKKHFSFAVVFVDVLDDNDHTPQFMFPRVNCLVPENLPVS 2323
Query: 118 LAVGRVHATDADEGQNAVVYYSV----------PEDIP-FVVDANTGDIRTNKALDYEKQ 166
+ V+A D D G + YS+ P D F++D TGDI + LDYE +
Sbjct: 2324 STICSVNALDFDTGPYGELTYSILSPCLSTHGQPHDHDLFLIDPFTGDIYAKQILDYELE 2383
Query: 167 QLY 169
Y
Sbjct: 2384 SKY 2386
Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 61/142 (42%), Gaps = 15/142 (10%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYR---------LLDNNTDAA---SYFNLDPATEHQGPIQ 77
G+ + QV A D D + + +D NT + + ATE++ IQ
Sbjct: 1900 GIIVTQVSAHDVDLNPAFVFSFTKENNPGTKFAIDQNTGIVMLVKTLDFEEATEYELLIQ 1959
Query: 78 DEGGLSST-ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAV 135
+ T + + V D+ND P F Y+ ++PE G +V V ATD D G+N +
Sbjct: 1960 ISDSVHHTEGMLVVHVLDVNDNPPVFSQDFYQVTIPETVPLGYSVLTVSATDVDSGKN-I 2018
Query: 136 VYYSVPEDIPFVVDANTGDIRT 157
Y + + F +D G I T
Sbjct: 2019 SYRILSSSMEFSIDRMNGTIFT 2040
Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPE 142
S+ VNI V D+ND P F + E + + G A+ A D D G N + YS+
Sbjct: 496 SSTEVNITVLDVNDNYPAFLTDSDEIKILQVTPPGTALYLARAEDKDSGLNGFIQYSIAS 555
Query: 143 DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
P F +D G + N +L+ + Q ++
Sbjct: 556 QTPGIFTIDQGLGMVYLNGSLEGDVPQKHM 585
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 18/112 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA------SYFNLDPAT- 70
FY + LG +++ V ATD DSGK + YR+L ++ + + + F + P
Sbjct: 1989 FYQVTIPETVPLGYSVLTVSATDVDSGKN--ISYRILSSSMEFSIDRMNGTIFTIHPVIL 2046
Query: 71 -EHQGPIQ-----DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
+ I+ +GG L + A V I + D+ND PEF Y S+ E
Sbjct: 2047 LDKMSTIRFLVEASDGGIPELKALALVEIGIQDMNDHAPEFTVEYYNISLSE 2098
>gi|41223264|emb|CAD92431.1| protocadherin [Homo sapiens]
Length = 831
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 77/162 (47%), Gaps = 26/162 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------------ 77
G+ LM+V ATD DSG + Y L DA F+LD T ++
Sbjct: 302 GIQLMKVSATDADSGPNAEINYLL---GPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLF 358
Query: 78 -----DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--QDGLAVGRVHATDA 128
D G L+S TV + + D ND +P F Y+F VPE + G VG + TD
Sbjct: 359 TILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPENLPRHG-TVGLITVTDP 417
Query: 129 DEGQNAVVYYSV-PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D G N+ V S+ E+ F +D+ TG IR N + D EKQ+ Y
Sbjct: 418 DYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESY 459
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 10/98 (10%)
Query: 78 DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
++GG SSTA + + VTD ND +P F+ E S+PE G +V ++HATDAD G+N
Sbjct: 42 EDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGEN 101
Query: 134 AVVYYSVPEDIP------FVVDANTGDIRTNKALDYEK 165
A +++S + F ++A TG I + LD E+
Sbjct: 102 AKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREE 139
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+ +A + I+V D ND P F S+PE G+ + +V ATDAD G NA + Y +
Sbjct: 266 LNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLL 325
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLYL 170
D P F +D TG + K LD EK+ YL
Sbjct: 326 GPDAPPEFSLDRRTGMLTVVKKLDREKEDKYL 357
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 71/171 (41%), Gaps = 34/171 (19%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP---------------I 76
T+ + TD D G V +LD N D F +D T P +
Sbjct: 408 TVGLITVTDPDYGDNSAVTLSILDENDD----FTIDSQTGVIRPNISFDREKQESYTFYV 463
Query: 77 QDEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFS----VPEGQDGLAVGRVHATDA 128
+ E G SS+A V I V D+ND P F PY +S +P G V +V A D
Sbjct: 464 KAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPSTNPGTVVFQVIAVDN 523
Query: 129 DEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D G NA V YS+ D+ F +D TG+I + D L L RV +
Sbjct: 524 DTGMNAEVRYSIVGGNTRDL-FAIDQETGNITLMEKCDV--TDLGLHRVLV 571
>gi|410965846|ref|XP_003989451.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 1 [Felis catus]
Length = 2896
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 28/180 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y R+ E+G ++ ++ATD D+ + YRLL+ A F +DP +
Sbjct: 211 YRERVRENLEVGYEVLTIRATDGDAPSNANMRYRLLEG---AGGVFEIDPRSGVVRTRAA 267
Query: 71 -------------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QD 116
E ++ G LS+TATV+I V D ND P+F Y VPE
Sbjct: 268 VDREEAAAYQLLVEANDQGRNPGPLSATATVHIVVEDENDNYPQFSEKRYVVQVPEDVAV 327
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V RV A+D D+GQNA ++YS+ F + + +G + LD+E + Y R+
Sbjct: 328 NTPVLRVQASDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLRI 387
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 76/159 (47%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQ-- 73
+G +++ ++A D+D+ ++ Y+L NT + LD E Q
Sbjct: 556 VGSSVLTLRARDRDANS--VITYQLTGGNTRNRFALSSQSGGGLITLALPLDYKQERQYV 613
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G S TA V I VTD N P FQS Y SV E + G +V + ATD D G
Sbjct: 614 LAVAASDGTRSHTAQVFINVTDANTHRPVFQSSHYTVSVSEDRPVGTSVAVIGATDEDTG 673
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + +P F +D +TG + T LDYE Q Y
Sbjct: 674 ENARITYVLEDPVPQFRIDPDTGTVYTMTELDYEDQAAY 712
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 75/167 (44%), Gaps = 33/167 (19%)
Query: 32 TLMQVKATDKDSGKFGLVEY------------------------RLLDNNTDAASYFNLD 67
+++QV ATD+DSG G + Y R LD A +NL
Sbjct: 764 SVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRENVAV--YNLR 821
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
+G LS++ V + V DIND P F+ E V E G V R+ A
Sbjct: 822 ALAVDRG---SPAPLSASVEVQVSVLDINDNPPVFERDELELFVEENSPVGSVVARIRAN 878
Query: 127 DADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
D DEG NA + Y + E ++P F +D +GD+R LD+E ++ Y+
Sbjct: 879 DPDEGPNAQIMYQIVEGNVPEVFQLDLLSGDLRALVELDFEVRREYV 925
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 78/177 (44%), Gaps = 40/177 (22%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQGPIQDE 79
+++V+A+D+D G+ + Y ++ N Y + + E+ I+ +
Sbjct: 331 VLRVQASDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLRIKAQ 390
Query: 80 GG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
G ++S+ V ++V D+ND P F S P++ +V E G +V + A DAD G+N
Sbjct: 391 DGGRPPLINSSGLVLVQVLDVNDNAPIFVSSPFQAAVLENVPLGHSVLHIQAVDADAGEN 450
Query: 134 AVVYY---------------------SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A + Y +VP D PF + ++G I LD E+ + Y
Sbjct: 451 ARLRYRLVDTASASAGGGAGPGPQDPAVPADFPFQIHNSSGWITVCAELDREEVEHY 507
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 37/170 (21%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPAT---------------- 70
G +++++A D D G+ G + Y+ L D ++ YF +DPAT
Sbjct: 114 GTGVIELRAHDPDEGEAGRLSYQMEALFDERSNG--YFLIDPATGAVSTARALDRETKDT 171
Query: 71 --------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
+H P + S+ + + V+D ND +P F+ Y V E + G V
Sbjct: 172 HVLKVSAVDHGSPRR-----SAATYLTVTVSDTNDHSPVFEQSEYRERVRENLEVGYEVL 226
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+ ATD D NA + Y + E F +D +G +RT A+D E+ Y
Sbjct: 227 TIRATDGDAPSNANMRYRLLEGAGGVFEIDPRSGVVRTRAAVDREEAAAY 276
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 28/187 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y + +G ++ + ATD+D+G+ + Y L D F +DP T
Sbjct: 645 SSHYTVSVSEDRPVGTSVAVIGATDEDTGENARITYVL----EDPVPQFRIDPDTGTVYT 700
Query: 71 ------EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
E Q +D G S T ++ I + D ND P F Y+ SV E
Sbjct: 701 MTELDYEDQAAYTLAITARDNGIPQKSDTTSLEILILDANDNAPRFLRDFYQGSVFEDVP 760
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
+V +V ATD D G N + Y+ D F ++ +G IRT + LD E +Y
Sbjct: 761 PSTSVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRENVAVYNL 820
Query: 172 RVFLISK 178
R + +
Sbjct: 821 RALAVDR 827
>gi|405951091|gb|EKC19034.1| Cadherin-23 [Crassostrea gigas]
Length = 1838
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 19/166 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEY-------RLLDNNTDAASY----FNLD 67
Y A + G T +++ATD DSG FG + Y R N++ Y + +
Sbjct: 429 YSAQIAENSPTGTTFARLQATDLDSGVFGKITYSVRGGNGRFGINDSTGDIYNTEALDRE 488
Query: 68 PATEHQGPIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVG-RVH 124
+E+ ++ D GG +T +N++VTD ND P F Y S+ EG ++
Sbjct: 489 KISEYYITVEAKDGGGFRTTVELNVKVTDTNDNKPLFTREAYFASLKEGATSFVRELKLE 548
Query: 125 ATDADEGQNAVVYYSVPEDIP-----FVVDANTGDIRTNKALDYEK 165
ATD DEG N+ V YS+ P F +D TG + ++ +DYE+
Sbjct: 549 ATDLDEGMNSQVLYSISNIQPPVTNTFTIDDATGVVGLSRPVDYEQ 594
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
L+STATV++ + DIND P+F P ++SV E +G VG + ATD D G+ + YS+
Sbjct: 952 LTSTATVSVSLIDINDNTPQFLPHPTQYSVEENAPNGTFVGNITATDRDSGRFGEITYSL 1011
Query: 141 P---EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+D +D+ TG I K LD E ++ Y+
Sbjct: 1012 QVTNDDQSLTIDSKTGIISVLKPLDREMREEYI 1044
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVV-YYSVPED-- 143
V + ++D+ND+ PEF +L Y+ S+ E G V RV A D D G V YY D
Sbjct: 69 VTLFISDVNDEVPEFVNLRYKESIYENATVGTTVIRVSAQDPDNGLGGTVSYYMEAADEL 128
Query: 144 --IPFVVDANTGDIRTNKALDYEKQQLY 169
F ++++TGD+ N +LD+E+ Y
Sbjct: 129 YKNAFRINSDTGDVIINSSLDFERHNFY 156
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVP 141
SS+ + + + D+ND P+F++ Y + E G R+ ATD D G + YSV
Sbjct: 405 SSSVKMMVHILDVNDNQPQFENTSYSAQIAENSPTGTTFARLQATDLDSGVFGKITYSVR 464
Query: 142 -EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ F ++ +TGDI +ALD EK Y
Sbjct: 465 GGNGRFGINDSTGDIYNTEALDREKISEY 493
Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 77/181 (42%), Gaps = 47/181 (25%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAA-SYF------------------NLDPATEHQG-- 74
+ A D D G VE+ L+ +T+A+ S+F N H G
Sbjct: 1105 ILANDADIGANAEVEFSLVSVDTNASDSWFYITTQYNSDIKNNEGVIRNKQSLLGHVGMY 1164
Query: 75 ----PIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD----------- 116
+QD+G LSS T+ I + + N+ + Q F VP+G
Sbjct: 1165 YVTVKVQDKGTPTRLSSNMTLLIEIIESNENLNQPQ-----FVVPKGPTATLQIKEQQPV 1219
Query: 117 GLAVGRVHATDADEGQNAVV-YYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYLERV 173
G +V +V ATDAD G+NA V YY PE F + +TG + T LD E+Q + RV
Sbjct: 1220 GTSVIQVSATDADHGKNAEVHYYLAPEKDYTKFQIHKDTGLLTTRAVLDREQQAQFEIRV 1279
Query: 174 F 174
Sbjct: 1280 I 1280
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 35/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------EHQGPIQDEGGL 82
G + + ATD+DSG+FG + Y L N D + +D T +++E L
Sbjct: 988 GTFVGNITATDRDSGRFGEITYSLQVTNDDQS--LTIDSKTGIISVLKPLDREMREEYIL 1045
Query: 83 SSTATVNI-----------------RVTDINDKNPEFQSLPY--EFSVPEGQDGLAVGRV 123
TAT NI +VTD+ND +P ++ + V Q+ V +
Sbjct: 1046 YVTATDNIDANPNQQRSERTGAIFVKVTDVNDNHPIITNIGTTPKSVVENSQNNTIVDTI 1105
Query: 124 HATDADEGQNAVVYYSV-------PEDIPFVVDANTGDIRTNKALDYEKQQL 168
A DAD G NA V +S+ + ++ DI+ N+ + KQ L
Sbjct: 1106 LANDADIGANAEVEFSLVSVDTNASDSWFYITTQYNSDIKNNEGVIRNKQSL 1157
Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 77/199 (38%), Gaps = 50/199 (25%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
+L Y + + +G ++QV A D D G + Y + FN+DP T
Sbjct: 192 NLPYSVVVGEDKAVGERVLQVTALDGDRGVPNGIRYTFVQG---GYQNFNVDPNTGWITI 248
Query: 71 -----EHQGPIQDEGGL-------------------SSTATVNIRVTDINDKNPEFQSLP 106
IQD GG+ ++T V I V+D+ND P F L
Sbjct: 249 KTELDRDDASIQDSGGVYAMYVKAEEVMSGVNYGNTTATTLVTISVSDVNDNTPTFNHLN 308
Query: 107 YEFSVPEG-QDGLAV-----GRVHATDADEGQNAVVYYSVPED-IPF---------VVDA 150
Y ++ E Q G+ V + D D+G N+ + +D P+ V
Sbjct: 309 YTATIQENMQSGVPVIFTANTIMSVNDIDQGLNSYFEIVLEKDGQPYYDFAPLPKEVFSE 368
Query: 151 NTGDIRTNKA--LDYEKQQ 167
++ IR N + LDYEK +
Sbjct: 369 SSILIRVNNSVDLDYEKSK 387
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 73/171 (42%), Gaps = 26/171 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY------RLLDN----NTDAA---- 61
+L Y + +G T+++V A D D+G G V Y L N N+D
Sbjct: 85 NLRYKESIYENATVGTTVIRVSAQDPDNGLGGTVSYYMEAADELYKNAFRINSDTGDVII 144
Query: 62 -SYFNLDPATEHQGPIQDEGGLSSTATVN----IRVTDINDKNPEFQSLPYEFSVPEGQD 116
S + + ++ I+ + G + + N + V D+ D P F +LPY SV G+D
Sbjct: 145 NSSLDFERHNFYEFVIKAKDGFGNESINNADFVVTVLDVQDTPPAFFNLPY--SVVVGED 202
Query: 117 ---GLAVGRVHATDADEG-QNAVVYYSVPEDIP-FVVDANTGDIRTNKALD 162
G V +V A D D G N + Y V F VD NTG I LD
Sbjct: 203 KAVGERVLQVTALDGDRGVPNGIRYTFVQGGYQNFNVDPNTGWITIKTELD 253
>gi|355563775|gb|EHH20337.1| hypothetical protein EGK_03169, partial [Macaca mulatta]
Length = 2846
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 24/174 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA------------ASYFNL 66
Y R+ E+G ++ ++A+D+DS + YR+L D + +
Sbjct: 192 YRERVRENLEVGYEVLTIRASDRDSPVNANLRYRVLGGAWDVFQLNESSGVVSTRAVLDR 251
Query: 67 DPATEHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-- 118
+ A E+Q ++ + G LS+TATV I V D ND P+F Y VPE GL
Sbjct: 252 EEAAEYQLLVEANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNYVVQVPE-DVGLNT 310
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLY 169
AV RV ATD D+GQNA ++YS+ F + + +G + LD+E Q Y
Sbjct: 311 AVLRVQATDRDQGQNAAIHYSILSGNVAGQFYLHSLSGILDVINPLDFEDVQKY 364
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQ-- 73
+G +++ ++A D+D+ ++ Y+L NT + LD E Q
Sbjct: 536 VGSSVLTLQARDRDANS--VITYQLTGGNTRNRFALSSQRGGGLITLALPLDYKQEQQYV 593
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G S TA V I VTD N P FQS Y SV E + G ++ + A D D G
Sbjct: 594 LAVTASDGTRSHTAHVLINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATLSANDEDTG 653
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + +P F +D ++G + T LDYE Q Y
Sbjct: 654 ENARITYVIQDPVPQFRIDPDSGTMYTMMELDYENQVAY 692
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 39/180 (21%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN--------LDP-----ATEHQGP 75
L +++V+ATD+D G+ + Y +L N Y + ++P ++
Sbjct: 308 LNTAVLRVQATDRDQGQNAAIHYSILSGNVAGQFYLHSLSGILDVINPLDFEDVQKYSLS 367
Query: 76 IQDEGG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
I+ + G ++S+ V+++V D+ND P F S P++ +V E G V + A DAD
Sbjct: 368 IKAQDGGRPPLINSSGVVSVQVLDVNDNEPIFVSSPFQATVLENVPLGYPVVHIQAVDAD 427
Query: 130 EGQNAVVYYSVPE--------------------DIPFVVDANTGDIRTNKALDYEKQQLY 169
G+NA ++Y + + D PF + ++G I LD E+ + Y
Sbjct: 428 SGENARLHYRLVDTASAFLGGGSAGPKNPAPTPDFPFQIHNSSGWITVCAELDREEVEHY 487
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 73/167 (43%), Gaps = 33/167 (19%)
Query: 32 TLMQVKATDKDSGKFGLVEY------------------------RLLDNNTDAASYFNLD 67
+++QV ATD+DSG G + Y R LD + A Y
Sbjct: 744 SILQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRE-NVAVYNLWA 802
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
A + P LS++ + + + DIND P F+ E V E G V ++ A
Sbjct: 803 LAVDRGSPTP----LSASVEIQVTILDINDNAPMFEKDELELFVEENNPVGSVVAKIRAN 858
Query: 127 DADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
D DEG NA + Y + E D+ F +D GD+R LD+E ++ Y+
Sbjct: 859 DPDEGPNAQIMYQIVEGDMRHFFQLDLLNGDLRAMVELDFEVRREYV 905
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y + +G ++ + A D+D+G+ + Y + D F +DP +
Sbjct: 625 SSHYTVSVSEDRPVGTSIATLSANDEDTGENARITYVI----QDPVPQFRIDPDSGTMYT 680
Query: 71 ------EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E+Q QD G S T T+ I + D ND P+F Y+ S+ E
Sbjct: 681 MMELDYENQVAYTLTIMAQDNGIPQKSDTTTLEILILDANDNAPQFLWDFYQGSIFEDAP 740
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ +V ATD D G N + Y+ D F ++ +G IRT + LD E +Y
Sbjct: 741 PSTSILQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRENVAVY 798
>gi|242397499|ref|NP_001101014.2| dachsous 1 precursor [Rattus norvegicus]
Length = 3291
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 28/162 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGP- 75
G +++V A D D G G V Y L +F++DP + E Q
Sbjct: 483 GSFVVRVTARDPDQGTNGQVTYSLAPGTH--THWFSIDPTSGIITTAATLDYELEPQPQL 540
Query: 76 --IQDEGGLS---STATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ +GGL S+ATV++ + D+ND P+FQ Y S+PEG Q G +V ATDAD
Sbjct: 541 IVVATDGGLPPLVSSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDAD 600
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEK 165
G ++ YS+ + PF +DA++G++ T + LD ++
Sbjct: 601 SGPFGLLSYSLGAGLGASGSPPFRIDAHSGEVCTTRILDRDQ 642
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 22/161 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN--NTDAASYFNLDPAT--- 70
SL ++A ++ G + + A D D+G FG + Y LL+ + F+L+ +T
Sbjct: 2702 SLLSTSLAENQPP-GTLVTTLHAMDGDAGTFGRLRYTLLEAVPGPEGREAFSLNSSTGEL 2760
Query: 71 --------EHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
EH G + D G LS++ TV++ +T ++ +P F + + F VPEG Q
Sbjct: 2761 RARVPFDYEHTGSFRLLVGAADAGNLSASVTVSVLITGEDEYDPVFLAPSFHFQVPEGAQ 2820
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDI 155
G ++G V ATD D G + +V YS+ P F ++ TG +
Sbjct: 2821 RGHSLGHVQATDEDGGADGLVLYSLATSSPYFGINQTTGAL 2861
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-NTDAASYFNLDPAT------ 70
FY A + + G +QV ATD DSG FGL+ Y L + F +D +
Sbjct: 576 FYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGASGSPPFRIDAHSGEVCTT 635
Query: 71 ----EHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDG 117
QGP D GGL S V + V D ND P+F Y S+ + G
Sbjct: 636 RILDRDQGPSSFDFTVTAIDGGGLKSMVYVKVFVADENDNPPQFYPREYAASLSAQSTPG 695
Query: 118 LAVGRVHATDADEGQNA-VVYYSVPEDIP--FVVDANTG 153
AV RVHA D D+G + + Y+ + + P F +DA++G
Sbjct: 696 TAVLRVHAHDPDQGPHGRLSYHILAGNSPPLFALDAHSG 734
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 79/178 (44%), Gaps = 30/178 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + R+ G +L+ +KATD D G G V Y + + F+LDP +
Sbjct: 1647 YNVILRENSPPGTSLLTLKATDPDLGANGQVTYGGVSGES-----FSLDPNSGVLTTLRA 1701
Query: 71 ---EHQGPI------QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
E Q I +D G L + TV + V D ND +P F + VPEGQD
Sbjct: 1702 LDREEQEEINLTVYARDRGLPPLLTHITVRVTVEDENDHSPTFGNTHLSLEVPEGQDPQT 1761
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQ---QLYLE 171
+ + A+D D G N + Y + P F +D +G+ T + LD E + QL +E
Sbjct: 1762 LTTLRASDPDGGLNGQLQYRILGGDPSGAFALDLTSGEFGTTRPLDREVEPAFQLQIE 1819
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 24/160 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDA---ASYFNLDPATEHQGP 75
+G L+ V+A+D D G GLV + L LD N+ A A + + +HQ
Sbjct: 2610 VGAELLHVEASDADPGPHGLVHFTLSSGDPLGLFELDENSGALRLAHPLDCETQAQHQLV 2669
Query: 76 IQ--DEGGLS-STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEG 131
+Q D G + V + V D+ND P F S+ E Q G V +HA D D G
Sbjct: 2670 VQAADPAGTHFALVPVTVEVQDVNDHGPAFPLSLLSTSLAENQPPGTLVTTLHAMDGDAG 2729
Query: 132 QNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYE 164
+ Y++ E +P F ++++TG++R DYE
Sbjct: 2730 TFGRLRYTLLEAVPGPEGREAFSLNSSTGELRARVPFDYE 2769
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 75/173 (43%), Gaps = 20/173 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL---------------DPATEHQGPI 76
TL ++A+D D G G ++YR+L + A +L +PA + Q
Sbjct: 1761 TLTTLRASDPDGGLNGQLQYRILGGDPSGAFALDLTSGEFGTTRPLDREVEPAFQLQIEA 1820
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQN 133
+D G LS+T V + V D ND P F Y VPE G + ++ A D DEG N
Sbjct: 1821 RDGGQPALSATLLVTVTVLDANDHAPAFPVPSYSVEVPEDAPVGTLLLQLQAHDPDEGDN 1880
Query: 134 AVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSYL 184
V Y + F+++ +G++ T ALD E Y V + A L
Sbjct: 1881 GRVMYYLGAGTAGAFLLEPTSGELSTATALDREHCASYAFSVTAVDGAAAGPL 1933
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY 138
G + TATV + + + ND +P P +V E Q G +VGRV ATD D G N + Y
Sbjct: 1077 GQQTGTATVRVVILNQNDHSPRLSEEPTFLAVAENQPPGTSVGRVFATDKDSGPNGRLTY 1136
Query: 139 SVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
S+ + F + TG++ T + LD E+Q +
Sbjct: 1137 SLQQLSEDSKAFRIHPQTGEVTTLQTLDREQQSSF 1171
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 66/159 (41%), Gaps = 30/159 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ 77
+G L+Q++A D D G G V Y L A F L+P + EH
Sbjct: 1863 VGTLLLQLQAHDPDEGDNGRVMYYL---GAGTAGAFLLEPTSGELSTATALDREHCASYA 1919
Query: 78 ---------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-----GQDGLAVGRV 123
G LS+T + + V D+ND P F + P +P + LA+ +
Sbjct: 1920 FSVTAVDGAAAGPLSTTVPITVTVRDVNDHAPAFPTSPLRLRLPRPGPSLNKPTLALATL 1979
Query: 124 HATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKA 160
A D D G NA + Y + P VD+ TG+IR ++
Sbjct: 1980 RAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARS 2018
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A +++ + DIND P F Y V E G V +V A+DAD G N V Y +
Sbjct: 233 ALLDVTLLDINDHAPAFNQSRYHAVVSESLAPGSPVLQVFASDADAGANGAVTYEINRRQ 292
Query: 143 ---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D PF +DA+TG ++ + LD+E+++++
Sbjct: 293 SEGDGPFSIDAHTGFLKLERPLDFEQRRVH 322
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
SS V + V D+ND P F Y +VPE G + V A+DAD G + +V++++
Sbjct: 2576 SSAVPVTVTVLDVNDNPPVFTRASYRVTVPEDMPVGAELLHVEASDADPGPHGLVHFTLS 2635
Query: 142 EDIP---FVVDANTGDIRTNKALDYEKQ 166
P F +D N+G +R LD E Q
Sbjct: 2636 SGDPLGLFELDENSGALRLAHPLDCETQ 2663
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 35/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G ++ +V ATDKDSG G + Y L + D+ + F + P T E Q
Sbjct: 1115 GTSVGRVFATDKDSGPNGRLTYSLQQLSEDSKA-FRIHPQTGEVTTLQTLDREQQSSFQL 1173
Query: 76 ---IQDEGG--LSSTATVNIRVTDINDKNPEF--------QSLPYEF--SVPEGQDGLAV 120
+QD G S+T TV++ V D+ND +P F LP + VP G V
Sbjct: 1174 LVQVQDAGSPPRSATGTVHVAVLDLNDNSPTFLQASGAAGGGLPIQVPDRVPPGT---LV 1230
Query: 121 GRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYL 170
+ A D DEG+N + Y++ F + +TG++ T +L ++ Y+
Sbjct: 1231 TTLQAKDPDEGENGTILYTLTGSGSELFSLHPHTGELHTAASLIRAERPHYV 1282
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYFN-LDP----------- 68
G + V A D D G+ V YRL L T A S LD
Sbjct: 1554 GPAALHVVARDPDLGEAARVSYRLAAGGDGHFRLHATTGALSVVRPLDREQRAEHVLTVV 1613
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
A++H P + SST + + V D+ND+ P F Y + E G ++ + ATD
Sbjct: 1614 ASDHGSPPR-----SSTQLLTVSVVDVNDEAPAFPQQEYNVILRENSPPGTSLLTLKATD 1668
Query: 128 ADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQ 167
D G N V Y F +D N+G + T +ALD E+Q+
Sbjct: 1669 PDLGANGQVTYGGVSGESFSLDPNSGVLTTLRALDREEQE 1708
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG---- 74
Y A + G +++V A D D G G + Y +L N+ F LD H G
Sbjct: 684 YAASLSAQSTPGTAVLRVHAHDPDQGPHGRLSYHILAGNS--PPLFALD---AHSGLLTV 738
Query: 75 --PI--------------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ QD GGL + A VNI + P F+ L Y FSVPE
Sbjct: 739 AWPLGRRANSVVQLEIGAQDGGGLQAEPIARVNISIVPGTPTPPIFEQLQYVFSVPEDVA 798
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
G +VG V A + G+ V ++ P F +D+ +G ++T + LD E LE
Sbjct: 799 PGTSVGVVQAHNP-PGRLGPVTLTLSGGDPRGLFSLDSASGLLKTLRPLDRELLGPVLE 856
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------- 68
Y M + G ++ V ATD+DSG G + Y L A F++D
Sbjct: 2373 LYQVMMLEHTPPGSAILSVSATDRDSGANGHISYHL----ASPAEGFSVDTNNGTLFTTV 2428
Query: 69 ---ATEHQGP--------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG- 114
A H+GP +D G G S+ ATV++++ D ND P F Y +V E
Sbjct: 2429 GAMALGHEGPGVVDVVLEARDHGAPGRSAQATVHVQLKDQNDHAPSFTLPHYRVAVSEDL 2488
Query: 115 QDGLAVGRVHATDADEGQ-NAVVYYSV 140
G + + A DAD + +A V YS+
Sbjct: 2489 PPGSTLLTLEAIDADGSRSHATVDYSI 2515
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 68/173 (39%), Gaps = 31/173 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH----------------- 72
G + ++A D DSG V + LL F +DP T H
Sbjct: 904 GTPVYTLRALDPDSGANSRVTFSLLAGGD---GLFTVDPTTGHVRLMGPLGPPGGPPHEL 960
Query: 73 QGPIQDEGGLSSTATVNIRVT----DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+ QD G T+ +RV I+ P F S Y +P G G + +V A
Sbjct: 961 EVEAQDGGSPPRTSHFRLRVVIQDLGIHGLAPRFDSPTYRVDLPSGTTTGTQILQVQAQA 1020
Query: 128 ADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D + V Y + D PF +++ +G + ALD E Q+LY +V +S
Sbjct: 1021 PD---GSPVTYHLAADGASNPFGLESQSGWLWVRAALDRESQELYTLKVMAVS 1070
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 70/180 (38%), Gaps = 39/180 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + L L+QV+A D D G G + Y L + A F++DP
Sbjct: 2169 YVAFLPESRPLEGPLLQVEADDLDQGSGGQISYSLAASQP-ARGLFHVDPATGTITTTAI 2227
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
AT+ P L +AT+ + V D ND P P+E V E
Sbjct: 2228 LDREIWAETRLVLMATDRGSP-----ALVGSATLTVMVIDTNDNRPTIPQ-PWELRVSED 2281
Query: 114 GQDGLAVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + +V D D G V++Y S P+D PF + G + LD+E+ Y
Sbjct: 2282 ALLGSEIAQVTGNDVDSG--PVLWYVLSPSGPQD-PFSIGRYGGRVSLTGPLDFEQCDHY 2338
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 44/93 (47%), Gaps = 15/93 (16%)
Query: 82 LSSTATVNIRVTDINDKNPEF-------QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
L + A + VTD+ND P F + LP E ++P G V RV A D D+G N
Sbjct: 446 LRAEAAFVLHVTDVNDNAPAFDRQLYRPEPLP-EVALP----GSFVVRVTARDPDQGTNG 500
Query: 135 VVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
V YS+ F +D +G I T LDYE
Sbjct: 501 QVTYSLAPGTHTHWFSIDPTSGIITTAATLDYE 533
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 59/139 (42%), Gaps = 14/139 (10%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIND 97
A D SG+ L R+LD + A + L E G G + V +RV D N+
Sbjct: 1373 ALDSASGRLYLA--RVLDFESGPA-WRALTVRAEGPG-----GAGARLMRVQVRVQDENE 1424
Query: 98 KNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD-EGQNAVVYYSVPEDIPFV----VDAN 151
P F P ++PE + G + A+DAD G N+ V Y + P V +DA
Sbjct: 1425 HAPAFARDPLALALPENPEPGATLYTFRASDADGPGPNSDVRYRLLRQEPPVPALRLDAR 1484
Query: 152 TGDIRTNKALDYEKQQLYL 170
TG + + LD E L
Sbjct: 1485 TGALSAPRGLDRETTPALL 1503
>gi|301605091|ref|XP_002932182.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
[Xenopus (Silurana) tropicalis]
Length = 2766
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 80/182 (43%), Gaps = 32/182 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGP 75
Y R+ E+G +M V+ATD DS + YRL+ + F +DP + GP
Sbjct: 212 YRETVRENMEVGYEVMTVRATDGDSLGNANIAYRLISGGREV---FEIDPRSGVIRILGP 268
Query: 76 I------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--- 114
+ D G SSTATV+I + D ND P+F Y V E
Sbjct: 269 VDREEIASYQLVVEANDQGHDPGPRSSTATVHITIQDENDNAPQFSEKRYVARVSEDSSI 328
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
+ L V V ATD D+G NA V+YS+ F +D TG I LD+E + Y
Sbjct: 329 ESQLLV--VTATDCDQGANAAVHYSILSGNSRGLFSIDPLTGAIFLAGTLDFETGREYTL 386
Query: 172 RV 173
RV
Sbjct: 387 RV 388
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 77/172 (44%), Gaps = 25/172 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y A + +G +++ V A D+D+ + + Y++ NT F++ ++ QG +
Sbjct: 527 YHARLNEDAAVGSSVLTVWAADRDA--YATITYQITAGNT--RHRFSISSLSDSQGLLTL 582
Query: 78 ------------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGL 118
+G S TA + VTD N P FQS Y SV E Q G
Sbjct: 583 ALPLDYKLERQFVLTITASDGMRSDTARAIVNVTDANTHRPVFQSSHYTVSVKEDQPAGT 642
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
V + ATD D G+NA + Y E +P F +D TG + T LDYE Q Y
Sbjct: 643 TVVVISATDEDTGENARIAYLAEEGLPQFAIDPETGAVTTTMELDYEDQVSY 694
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 80/173 (46%), Gaps = 24/173 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + + L+ V ATD D G V Y +L N+ F++DP T
Sbjct: 318 YVARVSEDSSIESQLLVVTATDCDQGANAAVHYSILSGNSRG--LFSIDPLTGAIFLAGT 375
Query: 71 -------EHQGPIQDEGG----LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
E+ ++ + G LS+ T V I+V D+ND P F S P++ SV E G
Sbjct: 376 LDFETGREYTLRVRAQDGGRPPLSNVTGLVIIQVLDVNDNAPNFVSGPFQASVLENAPIG 435
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLY 169
+V +V A DAD G NA + Y + PF ++ +TG I LD E+ + Y
Sbjct: 436 YSVLQVQALDADSGDNARLDYCLSGTTGPFSINNSTGWIMIQTELDREEIEFY 488
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 80/188 (42%), Gaps = 30/188 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL--------LDNNT--------- 58
S Y ++ G T++ + ATD+D+G+ + Y +D T
Sbjct: 627 SSHYTVSVKEDQPAGTTVVVISATDEDTGENARIAYLAEEGLPQFAIDPETGAVTTTMEL 686
Query: 59 ---DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
D SY A +H P + S T + I V D+ND P FQ Y+ SVPE
Sbjct: 687 DYEDQVSYTLAVTAHDHGIPQK-----SDTTYLEILVIDVNDNPPVFQRASYKGSVPEDS 741
Query: 116 DG-LAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+V +V ATD D G N ++Y+ D F V+ +G +RT + LD E Y
Sbjct: 742 PPYTSVLQVSATDRDSGLNGRIFYTFAGGDDGDGDFTVEYTSGIVRTLRQLDRENVVEYR 801
Query: 171 ERVFLISK 178
V+ + K
Sbjct: 802 LTVYAVDK 809
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 77/165 (46%), Gaps = 27/165 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPAT---EHQGPIQDE---- 79
G ++Q++A+D D G+ G +EY L D+ + ASYF+LD T G + E
Sbjct: 115 GTFVVQLRASDPDEGESGKLEYSMDALFDSRS--ASYFSLDSNTGVVTTSGELDRETKST 172
Query: 80 ---------GGLSS---TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
GG+ S AT+ + V+D ND +P F+ Y +V E + G V V AT
Sbjct: 173 HVFRVTVRDGGIPSRTAMATLTVTVSDTNDHDPNFEQQEYRETVRENMEVGYEVMTVRAT 232
Query: 127 DADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
D D NA + Y + F +D +G IR +D E+ Y
Sbjct: 233 DGDSLGNANIAYRLISGGREVFEIDPRSGVIRILGPVDREEIASY 277
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 71/166 (42%), Gaps = 33/166 (19%)
Query: 32 TLMQVKATDKDSGKFGLVEY------------------------RLLDNNTDAASYFNLD 67
+++QV ATD+DSG G + Y R LD + Y
Sbjct: 746 SVLQVSATDRDSGLNGRIFYTFAGGDDGDGDFTVEYTSGIVRTLRQLDRE-NVVEYRLTV 804
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
A + P+ + A V + V D+ND P F E V E G + R+ AT
Sbjct: 805 YAVDKGHPLPHR----TPAEVLVTVLDVNDNAPVFAREELEVKVFENSPLGPPLARITAT 860
Query: 127 DADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLY 169
D DEG NA + Y + E +IP F +D +G++ LDYE++ Y
Sbjct: 861 DPDEGPNAQIMYQIVEGNIPEVFQLDIFSGELTALVELDYEERSEY 906
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 99 NPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDAN 151
+P+F S Y+ SVPE + G V ++ A+D DEG++ + YS+ F +D+N
Sbjct: 96 SPQFHSPTYQVSVPENKPAGTFVVQLRASDPDEGESGKLEYSMDALFDSRSASYFSLDSN 155
Query: 152 TGDIRTNKALDYEKQQLYLERV 173
TG + T+ LD E + ++ RV
Sbjct: 156 TGVVTTSGELDRETKSTHVFRV 177
>gi|149068442|gb|EDM17994.1| dachsous 1 (Drosophila) (predicted) [Rattus norvegicus]
Length = 3278
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 28/162 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGP- 75
G +++V A D D G G V Y L +F++DP + E Q
Sbjct: 470 GSFVVRVTARDPDQGTNGQVTYSLAPGTH--THWFSIDPTSGIITTAATLDYELEPQPQL 527
Query: 76 --IQDEGGLS---STATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ +GGL S+ATV++ + D+ND P+FQ Y S+PEG Q G +V ATDAD
Sbjct: 528 IVVATDGGLPPLVSSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDAD 587
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEK 165
G ++ YS+ + PF +DA++G++ T + LD ++
Sbjct: 588 SGPFGLLSYSLGAGLGASGSPPFRIDAHSGEVCTTRILDRDQ 629
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 22/161 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN--NTDAASYFNLDPAT--- 70
SL ++A ++ G + + A D D+G FG + Y LL+ + F+L+ +T
Sbjct: 2689 SLLSTSLAENQPP-GTLVTTLHAMDGDAGTFGRLRYTLLEAVPGPEGREAFSLNSSTGEL 2747
Query: 71 --------EHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
EH G + D G LS++ TV++ +T ++ +P F + + F VPEG Q
Sbjct: 2748 RARVPFDYEHTGSFRLLVGAADAGNLSASVTVSVLITGEDEYDPVFLAPSFHFQVPEGAQ 2807
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDI 155
G ++G V ATD D G + +V YS+ P F ++ TG +
Sbjct: 2808 RGHSLGHVQATDEDGGADGLVLYSLATSSPYFGINQTTGAL 2848
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-NTDAASYFNLDPAT------ 70
FY A + + G +QV ATD DSG FGL+ Y L + F +D +
Sbjct: 563 FYNASLPEGTQPGTCFLQVTATDADSGPFGLLSYSLGAGLGASGSPPFRIDAHSGEVCTT 622
Query: 71 ----EHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDG 117
QGP D GGL S V + V D ND P+F Y S+ + G
Sbjct: 623 RILDRDQGPSSFDFTVTAIDGGGLKSMVYVKVFVADENDNPPQFYPREYAASLSAQSTPG 682
Query: 118 LAVGRVHATDADEGQNA-VVYYSVPEDIP--FVVDANTG 153
AV RVHA D D+G + + Y+ + + P F +DA++G
Sbjct: 683 TAVLRVHAHDPDQGPHGRLSYHILAGNSPPLFALDAHSG 721
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 79/178 (44%), Gaps = 30/178 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + R+ G +L+ +KATD D G G V Y + + F+LDP +
Sbjct: 1634 YNVILRENSPPGTSLLTLKATDPDLGANGQVTYGGVSGES-----FSLDPNSGVLTTLRA 1688
Query: 71 ---EHQGPI------QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
E Q I +D G L + TV + V D ND +P F + VPEGQD
Sbjct: 1689 LDREEQEEINLTVYARDRGLPPLLTHITVRVTVEDENDHSPTFGNTHLSLEVPEGQDPQT 1748
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQ---QLYLE 171
+ + A+D D G N + Y + P F +D +G+ T + LD E + QL +E
Sbjct: 1749 LTTLRASDPDGGLNGQLQYRILGGDPSGAFALDLTSGEFGTTRPLDREVEPAFQLQIE 1806
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 24/160 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDA---ASYFNLDPATEHQGP 75
+G L+ V+A+D D G GLV + L LD N+ A A + + +HQ
Sbjct: 2597 VGAELLHVEASDADPGPHGLVHFTLSSGDPLGLFELDENSGALRLAHPLDCETQAQHQLV 2656
Query: 76 IQ--DEGGLS-STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEG 131
+Q D G + V + V D+ND P F S+ E Q G V +HA D D G
Sbjct: 2657 VQAADPAGTHFALVPVTVEVQDVNDHGPAFPLSLLSTSLAENQPPGTLVTTLHAMDGDAG 2716
Query: 132 QNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYE 164
+ Y++ E +P F ++++TG++R DYE
Sbjct: 2717 TFGRLRYTLLEAVPGPEGREAFSLNSSTGELRARVPFDYE 2756
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 75/173 (43%), Gaps = 20/173 (11%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL---------------DPATEHQGPI 76
TL ++A+D D G G ++YR+L + A +L +PA + Q
Sbjct: 1748 TLTTLRASDPDGGLNGQLQYRILGGDPSGAFALDLTSGEFGTTRPLDREVEPAFQLQIEA 1807
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQN 133
+D G LS+T V + V D ND P F Y VPE G + ++ A D DEG N
Sbjct: 1808 RDGGQPALSATLLVTVTVLDANDHAPAFPVPSYSVEVPEDAPVGTLLLQLQAHDPDEGDN 1867
Query: 134 AVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSYL 184
V Y + F+++ +G++ T ALD E Y V + A L
Sbjct: 1868 GRVMYYLGAGTAGAFLLEPTSGELSTATALDREHCASYAFSVTAVDGAAAGPL 1920
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY 138
G + TATV + + + ND +P P +V E Q G +VGRV ATD D G N + Y
Sbjct: 1064 GQQTGTATVRVVILNQNDHSPRLSEEPTFLAVAENQPPGTSVGRVFATDKDSGPNGRLTY 1123
Query: 139 SVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
S+ + F + TG++ T + LD E+Q +
Sbjct: 1124 SLQQLSEDSKAFRIHPQTGEVTTLQTLDREQQSSF 1158
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 66/159 (41%), Gaps = 30/159 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ 77
+G L+Q++A D D G G V Y L A F L+P + EH
Sbjct: 1850 VGTLLLQLQAHDPDEGDNGRVMYYL---GAGTAGAFLLEPTSGELSTATALDREHCASYA 1906
Query: 78 ---------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-----GQDGLAVGRV 123
G LS+T + + V D+ND P F + P +P + LA+ +
Sbjct: 1907 FSVTAVDGAAAGPLSTTVPITVTVRDVNDHAPAFPTSPLRLRLPRPGPSLNKPTLALATL 1966
Query: 124 HATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKA 160
A D D G NA + Y + P VD+ TG+IR ++
Sbjct: 1967 RAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARS 2005
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
A +++ + DIND P F Y V E G V +V A+DAD G N V Y +
Sbjct: 220 ALLDVTLLDINDHAPAFNQSRYHAVVSESLAPGSPVLQVFASDADAGANGAVTYEINRRQ 279
Query: 143 ---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D PF +DA+TG ++ + LD+E+++++
Sbjct: 280 SEGDGPFSIDAHTGFLKLERPLDFEQRRVH 309
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
SS V + V D+ND P F Y +VPE G + V A+DAD G + +V++++
Sbjct: 2563 SSAVPVTVTVLDVNDNPPVFTRASYRVTVPEDMPVGAELLHVEASDADPGPHGLVHFTLS 2622
Query: 142 EDIP---FVVDANTGDIRTNKALDYEKQ 166
P F +D N+G +R LD E Q
Sbjct: 2623 SGDPLGLFELDENSGALRLAHPLDCETQ 2650
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 35/172 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G ++ +V ATDKDSG G + Y L + D+ + F + P T E Q
Sbjct: 1102 GTSVGRVFATDKDSGPNGRLTYSLQQLSEDSKA-FRIHPQTGEVTTLQTLDREQQSSFQL 1160
Query: 76 ---IQDEGG--LSSTATVNIRVTDINDKNPEF--------QSLPYEF--SVPEGQDGLAV 120
+QD G S+T TV++ V D+ND +P F LP + VP G V
Sbjct: 1161 LVQVQDAGSPPRSATGTVHVAVLDLNDNSPTFLQASGAAGGGLPIQVPDRVPPGT---LV 1217
Query: 121 GRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYL 170
+ A D DEG+N + Y++ F + +TG++ T +L ++ Y+
Sbjct: 1218 TTLQAKDPDEGENGTILYTLTGSGSELFSLHPHTGELHTAASLIRAERPHYV 1269
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 68/160 (42%), Gaps = 27/160 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYFN-LDP----------- 68
G + V A D D G+ V YRL L T A S LD
Sbjct: 1541 GPAALHVVARDPDLGEAARVSYRLAAGGDGHFRLHATTGALSVVRPLDREQRAEHVLTVV 1600
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
A++H P + SST + + V D+ND+ P F Y + E G ++ + ATD
Sbjct: 1601 ASDHGSPPR-----SSTQLLTVSVVDVNDEAPAFPQQEYNVILRENSPPGTSLLTLKATD 1655
Query: 128 ADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQ 167
D G N V Y F +D N+G + T +ALD E+Q+
Sbjct: 1656 PDLGANGQVTYGGVSGESFSLDPNSGVLTTLRALDREEQE 1695
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG---- 74
Y A + G +++V A D D G G + Y +L N+ F LD H G
Sbjct: 671 YAASLSAQSTPGTAVLRVHAHDPDQGPHGRLSYHILAGNS--PPLFALD---AHSGLLTV 725
Query: 75 --PI--------------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ QD GGL + A VNI + P F+ L Y FSVPE
Sbjct: 726 AWPLGRRANSVVQLEIGAQDGGGLQAEPIARVNISIVPGTPTPPIFEQLQYVFSVPEDVA 785
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
G +VG V A + G+ V ++ P F +D+ +G ++T + LD E LE
Sbjct: 786 PGTSVGVVQAHNP-PGRLGPVTLTLSGGDPRGLFSLDSASGLLKTLRPLDRELLGPVLE 843
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------- 68
Y M + G ++ V ATD+DSG G + Y L A F++D
Sbjct: 2360 LYQVMMLEHTPPGSAILSVSATDRDSGANGHISYHL----ASPAEGFSVDTNNGTLFTTV 2415
Query: 69 ---ATEHQGP--------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG- 114
A H+GP +D G G S+ ATV++++ D ND P F Y +V E
Sbjct: 2416 GAMALGHEGPGVVDVVLEARDHGAPGRSAQATVHVQLKDQNDHAPSFTLPHYRVAVSEDL 2475
Query: 115 QDGLAVGRVHATDADEGQ-NAVVYYSV 140
G + + A DAD + +A V YS+
Sbjct: 2476 PPGSTLLTLEAIDADGSRSHATVDYSI 2502
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 68/173 (39%), Gaps = 31/173 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH----------------- 72
G + ++A D DSG V + LL F +DP T H
Sbjct: 891 GTPVYTLRALDPDSGANSRVTFSLLAGGD---GLFTVDPTTGHVRLMGPLGPPGGPPHEL 947
Query: 73 QGPIQDEGGLSSTATVNIRVT----DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+ QD G T+ +RV I+ P F S Y +P G G + +V A
Sbjct: 948 EVEAQDGGSPPRTSHFRLRVVIQDLGIHGLAPRFDSPTYRVDLPSGTTTGTQILQVQAQA 1007
Query: 128 ADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D + V Y + D PF +++ +G + ALD E Q+LY +V +S
Sbjct: 1008 PD---GSPVTYHLAADGASNPFGLESQSGWLWVRAALDRESQELYTLKVMAVS 1057
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 70/180 (38%), Gaps = 39/180 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + L L+QV+A D D G G + Y L + A F++DP
Sbjct: 2156 YVAFLPESRPLEGPLLQVEADDLDQGSGGQISYSLAASQP-ARGLFHVDPATGTITTTAI 2214
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
AT+ P L +AT+ + V D ND P P+E V E
Sbjct: 2215 LDREIWAETRLVLMATDRGSP-----ALVGSATLTVMVIDTNDNRPTIPQ-PWELRVSED 2268
Query: 114 GQDGLAVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + +V D D G V++Y S P+D PF + G + LD+E+ Y
Sbjct: 2269 ALLGSEIAQVTGNDVDSG--PVLWYVLSPSGPQD-PFSIGRYGGRVSLTGPLDFEQCDHY 2325
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 44/93 (47%), Gaps = 15/93 (16%)
Query: 82 LSSTATVNIRVTDINDKNPEF-------QSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
L + A + VTD+ND P F + LP E ++P G V RV A D D+G N
Sbjct: 433 LRAEAAFVLHVTDVNDNAPAFDRQLYRPEPLP-EVALP----GSFVVRVTARDPDQGTNG 487
Query: 135 VVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
V YS+ F +D +G I T LDYE
Sbjct: 488 QVTYSLAPGTHTHWFSIDPTSGIITTAATLDYE 520
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 59/139 (42%), Gaps = 14/139 (10%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIND 97
A D SG+ L R+LD + A + L E G G + V +RV D N+
Sbjct: 1360 ALDSASGRLYLA--RVLDFESGPA-WRALTVRAEGPG-----GAGARLMRVQVRVQDENE 1411
Query: 98 KNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD-EGQNAVVYYSVPEDIPFV----VDAN 151
P F P ++PE + G + A+DAD G N+ V Y + P V +DA
Sbjct: 1412 HAPAFARDPLALALPENPEPGATLYTFRASDADGPGPNSDVRYRLLRQEPPVPALRLDAR 1471
Query: 152 TGDIRTNKALDYEKQQLYL 170
TG + + LD E L
Sbjct: 1472 TGALSAPRGLDRETTPALL 1490
>gi|432879803|ref|XP_004073555.1| PREDICTED: protocadherin-20-like [Oryzias latipes]
Length = 784
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 73/158 (46%), Gaps = 25/158 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------PATEHQGPI--- 76
GV+L+QV A+D DSG G + YR LD T A FN+D P Q +
Sbjct: 467 GVSLLQVSASDADSGSNGKLTYR-LDEYTSA--IFNIDSTVGQLSVRAPLDREQQSVHKL 523
Query: 77 ----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
QD G L S AT+ I V D ND P F S + F +PE VGRV D D
Sbjct: 524 TVFAQDGGSPPLESHATICIHVLDQNDNAPGFLSTHFIFFIPENASPFTQVGRVEVKDPD 583
Query: 130 EGQNAVV-YYSVPEDIPFVVDANTGDIRTNKALDYEKQ 166
EG+N V Y V PF +D + I T LD E +
Sbjct: 584 EGENGSVDLYVVNSSGPFGID-KSQRIHTTTKLDREAE 620
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 79/176 (44%), Gaps = 14/176 (7%)
Query: 3 PCPIPSALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAA 61
P + + LE+ DS F G+ + ++ +L +GK+ L + LD D
Sbjct: 361 PPTVLAVLELQGDSSFKGSSLAIEDDVPFSL------SPQNGKYLLSTSKPLDYEMKDEY 414
Query: 62 SYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAV 120
S + +GP+ L S T+ + V D+ND P F Y+ V E G+++
Sbjct: 415 SISVVAHVRLAEGPLI----LPSRQTIRLLVVDVNDNAPHFSQSQYQLEVEENNVAGVSL 470
Query: 121 GRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
+V A+DAD G N + Y + E F +D+ G + LD E+Q ++ VF
Sbjct: 471 LQVSASDADSGSNGKLTYRLDEYTSAIFNIDSTVGQLSVRAPLDREQQSVHKLTVF 526
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYE-FSVP-EGQDGLAVGRVHATDADEGQNAVVYYS 139
LS++A + + VTD++D P F S ++P + + V +V ATD D G NA + YS
Sbjct: 214 LSASAGLIVTVTDVDDNCPSFSSKSARTVTIPGDSLENTLVTQVTATDPDLGSNAAIVYS 273
Query: 140 VPEDIP------FVVDANTGDIRTNKAL-DYEKQQLYLE 171
+ F +D+NTG IR + L Y+ ++L L+
Sbjct: 274 FSPKVSERVREIFSLDSNTGHIRLTQNLHSYKSEELGLK 312
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFS-----VPEGQDGLAVGRVHATDADEGQNAV 135
L STA V + V DIND P+ LP S P G + +V+A D D G N+
Sbjct: 637 ALVSTARVTVFVEDINDNQPKV-ILPKSNSSCLTVSPSTLAGTVLTKVYAVDEDSGLNSE 695
Query: 136 VYYSV--PEDI----PFVVDANTGDIRTNKAL 161
V ++V PE + PF +D +G I ++ L
Sbjct: 696 VTFAVVAPESVQNQSPFQIDPRSGTITLSQQL 727
>gi|432090244|gb|ELK23677.1| Protocadherin alpha-2 [Myotis davidii]
Length = 3484
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 73/147 (49%), Gaps = 13/147 (8%)
Query: 34 MQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVT 93
+ VK D+ + GLV + LD + + L AT+ P L+ + V + V
Sbjct: 2456 LDVKTNSDDNTQIGLVLRKSLDRE-ETPEHNLLLMATDRGKP-----ELTGSVQVLVTVM 2509
Query: 94 DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------F 146
D+ND P FQ YE + E D G V R++A+D DEG N V YS +P F
Sbjct: 2510 DVNDNAPRFQQSEYEVRIFENSDNGTTVIRLNASDPDEGTNQEVSYSFNSFVPPMVMDQF 2569
Query: 147 VVDANTGDIRTNKALDYEKQQLYLERV 173
+D+N+G+I+ LD+EK + Y R+
Sbjct: 2570 SIDSNSGEIKIRNNLDFEKVKSYKIRI 2596
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 71/146 (48%), Gaps = 19/146 (13%)
Query: 34 MQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGG---LSSTATVNI 90
+ ++ D+ S LV + LD AA L + +GG L+ T + I
Sbjct: 711 LDIQTNDELSQSLSLVLRKSLDREETAAVNLLL---------VATDGGRPELTGTVQLLI 761
Query: 91 RVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDIP---- 145
V D+ND P F Y+ + E +G V +++++DADEG N+ + YS D+P
Sbjct: 762 NVLDVNDNEPAFDQSVYKVQLLENTANGTLVIKLNSSDADEGSNSEIVYSFSSDVPSTIK 821
Query: 146 --FVVDANTGDIRTNKALDYEKQQLY 169
F +D +TG+IRT LDYE + Y
Sbjct: 822 TKFKIDPSTGEIRTKGQLDYEVAKSY 847
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 64/143 (44%), Gaps = 13/143 (9%)
Query: 34 MQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVT 93
+ VK DK+ GLV +LL N D + L A + P L+ T + I +
Sbjct: 1489 LDVKRNDKEIKSLGLVLKKLL-NREDTPQHHLLIMAVDGGKP-----ELTGTTQLMITIL 1542
Query: 94 DINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDI------PF 146
D+ND P F+ YE + E +G V+A+D DEG N + YS D F
Sbjct: 1543 DVNDNAPAFERSVYEVRLSENAPNGTLAVIVNASDLDEGVNKDIVYSFNADTSADTLSKF 1602
Query: 147 VVDANTGDIRTNKALDYEKQQLY 169
+D G IR LD+E +LY
Sbjct: 1603 HLDPVNGYIRVKGNLDFEDTKLY 1625
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 13/152 (8%)
Query: 34 MQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVT 93
+ ++A+D+ S L ++LD + L AT+ P L + I V
Sbjct: 180 LDIQASDELSKSLALELRKVLDREETPELHLLLT-ATDGGKP-----ELEGRVHLLITVL 233
Query: 94 DINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP------F 146
D+ND P F Y + E +G V ++A+DADEG N V + D+P F
Sbjct: 234 DVNDNAPLFSQAVYRVHLLETIANGTLVTTLNASDADEGVNGEVVFFFGSDVPVNIRKNF 293
Query: 147 VVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
+D+++G+IR LDYE+ + Y +V + K
Sbjct: 294 KIDSSSGEIRLIGELDYEETRSYEIQVKAVDK 325
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 70/165 (42%), Gaps = 38/165 (23%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG----------PIQDE-------- 79
A D D G + Y+L N +F+LD T +G P+ E
Sbjct: 1938 AFDMDIGANAELRYKLNSNE-----HFHLDVKTNEEGTNSLGLVLTKPVDREETQELRLL 1992
Query: 80 -----GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADE 130
GG L+ T + I V D ND PEF Y+ + E +G V +++A+DADE
Sbjct: 1993 LIAVDGGKPELTGTVQLLINVLDANDNAPEFDKSVYKVRLLENTPNGTLVIKLNASDADE 2052
Query: 131 GQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEKQQLY 169
G N + Y + F +++N+G+I LDYE LY
Sbjct: 2053 GINKEIVYLFSNLVLDNVKSKFTINSNSGEITVKGELDYEDCNLY 2097
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 41 KDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNP 100
K GK+ ++ R L + + AT+ P L+ + ++ I V D ND P
Sbjct: 2873 KGRGKYPVLVLRKLLDREENPQLLLFLTATDGGKP-----ELTGSVSLLILVLDANDNAP 2927
Query: 101 EFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDI------PFVVDANTG 153
F YE ++ E + V R++A+DADE N + YS + F+++ TG
Sbjct: 2928 IFDRSIYEVTMYENAPNQTLVIRLNASDADEEINKELIYSFSSLVSPSIRRKFLMNERTG 2987
Query: 154 DIRTNKALDYEKQQLY 169
+IR N A+D+E Y
Sbjct: 2988 EIRVNDAIDFEDSNAY 3003
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 74/176 (42%), Gaps = 36/176 (20%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRL-------------------LDNNTDAASYF 64
R+ LG + + +D+DSG G V L LD+ D S
Sbjct: 2141 REDAPLGTVIALISLSDRDSGANGQVTCTLSPHVPFKLVSTFKNYYSLVLDSALDRESVA 2200
Query: 65 NLDPATEHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAV 120
N + + +GG LSSTA+V++ V D+ND P F + V E G +
Sbjct: 2201 NYELVVTAR-----DGGSPSLSSTASVSVEVADVNDNAPLFAQPEHTVFVKENNPPGGHI 2255
Query: 121 GRVHATDADEGQNAVVYYSVPED-------IPFV-VDANTGDIRTNKALDYEKQQL 168
V A DAD +NA V YS+ E +V V A +G + + LD E+ +L
Sbjct: 2256 FTVSARDADAQENARVSYSLVERRVGERALSSYVSVHAESGQVSALQPLDREELEL 2311
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 26/167 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNN-----TDAASYFNL--DPATEHQGPIQDE- 79
+LG + V +D+DSG G V L + + +Y++L D A + + E
Sbjct: 3051 QLGTVIALVSVSDRDSGANGQVTCTLTPHVPFKLVSTFKNYYSLVLDSALDREKVSHYEL 3110
Query: 80 ------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
GG LS+TA+V++ V D+ND P F + V E G + V A DAD
Sbjct: 3111 VVTARDGGSPSLSATASVSVEVADVNDNAPLFAQPEHTVFVKENNPPGGHIFTVSARDAD 3170
Query: 130 EGQNAVVYYSVPED-------IPFV-VDANTGDIRTNKALDYEKQQL 168
+NA V YS+ E +V V A +G + + LD E+ +L
Sbjct: 3171 AQENARVSYSLVERRVGERALSSYVSVHAESGQVSALQPLDREELEL 3217
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 76 IQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQ 132
+ D+G ++ TV + + D ND +PE P VPE Q G + V +D D G
Sbjct: 3009 VTDKGNPPMAGHCTVLVEILDENDNSPEVVVTPLSLPVPEDAQLGTVIALVSVSDRDSGA 3068
Query: 133 NAVVYYSVPEDIPFVVDA---NTGDIRTNKALDYEKQQLY 169
N V ++ +PF + + N + + ALD EK Y
Sbjct: 3069 NGQVTCTLTPHVPFKLVSTFKNYYSLVLDSALDREKVSHY 3108
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
LS+TA+V++ V D+ND P F + V E G + V A DAD +NA V YS+
Sbjct: 972 LSATASVSVEVADVNDNAPLFAQPEHTVFVKENNPPGGHIFTVSARDADAQENARVSYSL 1031
Query: 141 PED-------IPFV-VDANTGDIRTNKALDYEKQQL 168
E +V V A +G + + LD E+ +L
Sbjct: 1032 VERRVGERALSSYVSVHAESGQVSARQPLDREELEL 1067
Score = 39.3 bits (90), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 71/171 (41%), Gaps = 36/171 (21%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL-------------------LDNNTDAASYFNLDPA 69
LG + + +D DSG G V L LD+ D S N +
Sbjct: 1674 LGTIIALISVSDLDSGINGQVTCTLSPHVPFKLVSTFKNYYSLVLDSALDRESVANYELV 1733
Query: 70 TEHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHA 125
+ +GG LS+TA+V++ V D+ND P F + V E G + V A
Sbjct: 1734 VTAR-----DGGSPSLSATASVSVEVADVNDNAPLFAQPEHTVFVKENNPPGGHIFTVSA 1788
Query: 126 TDADEGQNAVVYYSVPED-------IPFV-VDANTGDIRTNKALDYEKQQL 168
DAD +NA V YS+ E +V V A +G + + LD E+ +L
Sbjct: 1789 RDADAQENARVSYSLVERRVGERALSSYVSVHAESGQVSALQPLDREELEL 1839
Score = 35.4 bits (80), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 56/140 (40%), Gaps = 25/140 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLDPAT-----------------E 71
G + V A+D D G + Y D + D S F+LDP E
Sbjct: 1567 GTLAVIVNASDLDEGVNKDIVYSFNADTSADTLSKFHLDPVNGYIRVKGNLDFEDTKLYE 1626
Query: 72 HQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD---GLAVGRVHAT 126
Q D+G ++ TV + + DIND PE + S+P +D G + + +
Sbjct: 1627 IQVEATDKGTPPMADHCTVLVEILDINDNVPEL--VIKSLSLPVLEDAPLGTIIALISVS 1684
Query: 127 DADEGQNAVVYYSVPEDIPF 146
D D G N V ++ +PF
Sbjct: 1685 DLDSGINGQVTCTLSPHVPF 1704
>gi|213625109|gb|AAI69845.1| Cadherin 6, type 2, K-cadherin [Xenopus laevis]
Length = 792
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 82/185 (44%), Gaps = 37/185 (20%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + E+G ++QV A D D +G V Y +L YF+++ T
Sbjct: 165 LYTATVPEMSEVGAFVVQVTANDADDPTYGNSARVVYSILQ----GQPYFSVESETGIIK 220
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
+++ IQ + GGLS T VNI ++D+ND P F Y+
Sbjct: 221 TALPNMDRENREQYKVVIQAKDMGGQLGGLSGTTVVNIALSDVNDNPPRFLQSTYQLRAL 280
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYE 164
E G ++G++ A D DEG+NA Y + E DI D G I K LD+E
Sbjct: 281 ESSPVGSSIGKIKANDTDEGENAETEYHISEGDESNMFDIITDRDTQEGVITVKKPLDFE 340
Query: 165 KQQLY 169
K++LY
Sbjct: 341 KKKLY 345
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y +VPE + G V +V A DAD+ G +A V YS+ + P
Sbjct: 149 IKIHDINDNEPKFTQDLYTATVPEMSEVGAFVVQVTANDADDPTYGNSARVVYSILQGQP 208
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 209 YFSVESETGIIKTALPNMDRENREQY 234
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D VG++H+ D D+G ++ Y + FV++ NTGDI+ K LD E++ +Y+
Sbjct: 70 GSDYQYVGKLHS-DQDKGDGSLKYILSGDGAGDLFVINENTGDIQATKRLDREEKPVYIL 128
Query: 172 RVFLISKF 179
R +++
Sbjct: 129 RAQAVNRI 136
>gi|11119968|gb|AAG30809.1|AF263272_1 cadherin-6 [Xenopus laevis]
gi|213626669|gb|AAI69843.1| Cadherin 6, type 2, K-cadherin [Xenopus laevis]
Length = 792
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 82/185 (44%), Gaps = 37/185 (20%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT---- 70
Y A + E+G ++QV A D D +G V Y +L YF+++ T
Sbjct: 165 LYTATVPEMSEVGAFVVQVTANDADDPTYGNSARVVYSILQ----GQPYFSVESETGIIK 220
Query: 71 ------------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
+++ IQ + GGLS T VNI ++D+ND P F Y+
Sbjct: 221 TALPNMDRENREQYKVVIQAKDMGGQLGGLSGTTVVNIALSDVNDNPPRFLQSTYQLRAL 280
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYE 164
E G ++G++ A D DEG+NA Y + E DI D G I K LD+E
Sbjct: 281 ESSPVGSSIGKIKANDTDEGENAETEYHISEGDESNMFDIITDRDTQEGVITVKKPLDFE 340
Query: 165 KQQLY 169
K++LY
Sbjct: 341 KKKLY 345
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F Y +VPE + G V +V A DAD+ G +A V YS+ + P
Sbjct: 149 IKIHDINDNEPKFTQDLYTATVPEMSEVGAFVVQVTANDADDPTYGNSARVVYSILQGQP 208
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F V++ TG I+T +D E ++ Y
Sbjct: 209 YFSVESETGIIKTALPNMDRENREQY 234
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
G D VG++H+ D D+G ++ Y + D+ FV++ NTGDI+ K LD E++ +Y+
Sbjct: 70 GSDYQYVGKLHS-DQDKGDGSLKYILSGDGAGDL-FVINENTGDIQATKRLDREEKPVYI 127
Query: 171 ERVFLISKF 179
R +++
Sbjct: 128 LRAQAVNRI 136
>gi|405951764|gb|EKC19649.1| Protocadherin-11 X-linked [Crassostrea gigas]
Length = 1099
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
LS A+ ++VTD ND++P F Y +PEG + G + ++ ATD D G+NA + Y +
Sbjct: 438 LSCNASFRVQVTDENDQDPRFSQAEYRAKIPEGNNPGDGIIQIMATDNDLGENARIQYKL 497
Query: 141 PED--IPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
D F VDA+TG IR NK D E Y RV+ +
Sbjct: 498 HGDAGADFTVDADTGRIRANKVYDRESMPQYRFRVYAV 535
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 26/174 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--QGPI 76
Y A + + G ++Q+ ATD D G+ ++Y+L + DA + F +D T +
Sbjct: 463 YRAKIPEGNNPGDGIIQIMATDNDLGENARIQYKL---HGDAGADFTVDADTGRIRANKV 519
Query: 77 QDEGGL-----------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
D + SSTAT+ + + DIND PEF + S+ E
Sbjct: 520 YDRESMPQYRFRVYAVDSGDPPRSSTATIIVDIEDINDNFPEFTQNQFRASIQENVPFDT 579
Query: 119 AVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLYL 170
++ ++ ATD D G N + YS+P+ D+PF + N G + N LD EK Y+
Sbjct: 580 SILQLTATDKDTGDNGKISYSLPKHSDVPFFLTPN-GTVLVNGNLDREKNNKYV 632
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 75/168 (44%), Gaps = 24/168 (14%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN--LDPATEHQGPIQ 77
GA+ +D E V +VK D F ++ Y+ LD++ N LD IQ
Sbjct: 155 GAIDQDSEEYSVKKYEVKP---DGTPFDVIFYKNLDDSLSVKLVVNRSLDREETSHYDIQ 211
Query: 78 ----DEGGLSSTA--TVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVG----RVHATD 127
D G VNI + DIND +P F + Y SV E +AV ++ A+D
Sbjct: 212 VLAYDGGSPPKVGMMKVNITIEDINDNSPVFDNSNYNVSVKE---EIAVNSTILQLRASD 268
Query: 128 ADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
D G+N + Y + + P F V+ NTG+++ K L YE + Y
Sbjct: 269 RDTGRNGEILYKISTNQPEKVQELFFVNENTGELKIAKQLIYEPSEKY 316
>gi|195342413|ref|XP_002037795.1| GM18105 [Drosophila sechellia]
gi|194132645|gb|EDW54213.1| GM18105 [Drosophila sechellia]
Length = 1207
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 26/175 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + + +G T++ V ATD D+G G++ Y + N F++D T
Sbjct: 86 YQVIVPENEPVGSTILTVGATDGDTGPNGMLRYSISGGNERQD--FSVDERTGGIVIQQQ 143
Query: 71 ---------EHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
+QD G LSS A + I +TD+ND P F Y +PE + G
Sbjct: 144 LDYDLIQEYHLNITVQDLGYHPLSSVAMLTIILTDVNDNPPVFNHKEYHCYIPENKPAGT 203
Query: 119 AVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V + HATD D +NA+++Y S P+ F+++ + G I + + DYE++++Y
Sbjct: 204 FVFQAHATDKDSPKNAIIHYAFLPSGPDRHFFIMNQSNGTISSAVSFDYEERRIY 258
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 69/158 (43%), Gaps = 21/158 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTD--------------AASYFNLDPATEHQGP 75
G + Q ATDKDS K ++ Y L + D +A F+ + +
Sbjct: 202 GTFVFQAHATDKDSPKNAIIHYAFLPSGPDRHFFIMNQSNGTISSAVSFDYEERRIYTLQ 261
Query: 76 IQDE---GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
I+ + + S A + + V +N+ P+F + F V E G VG V ATD D G
Sbjct: 262 IKAKNPDSSMESYANLYVHVLGVNEFYPQFLQPVFHFDVSETSAVGTRVGAVQATDKDSG 321
Query: 132 QNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQ 166
++ VYY + D F +D NTG I + LD E Q
Sbjct: 322 EDGRVYYLLVGSSNDKGFRIDTNTGLIYVARHLDRETQ 359
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
+S + V I VT N P F+ Y+ VPE + G + V ATD D G N ++ YS+
Sbjct: 61 MSDESRVVIVVTGENLDTPRFRVNSYQVIVPENEPVGSTILTVGATDGDTGPNGMLRYSI 120
Query: 141 P---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
E F VD TG I + LDY+ Q Y
Sbjct: 121 SGGNERQDFSVDERTGGIVIQQQLDYDLIQEY 152
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 71/167 (42%), Gaps = 29/167 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF-----------NLDPATEHQ---- 73
+G + V+ATDKDSG+ G V Y L+ ++ D +LD T+++
Sbjct: 306 VGTRVGAVQATDKDSGEDGRVYYLLVGSSNDKGFRIDTNTGLIYVARHLDRETQNRVVLT 365
Query: 74 ------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
G I+ G + A V I + D ND PEF Y ++ E G V V A
Sbjct: 366 VMAKNYGSIR--GNDTDEAQVIISIQDGNDP-PEFIKHYYTSTISEAAPVGTNVTTVKAI 422
Query: 127 DAD-EGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D D QN YS+ F +D TG+I T LD E+ Y
Sbjct: 423 DKDVRTQNNQFSYSIINGNLKQSFKIDVQTGEISTASRLDREETSTY 469
>gi|41223268|emb|CAD92433.1| protocadherin [Homo sapiens]
Length = 762
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 77/162 (47%), Gaps = 26/162 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------------ 77
G+ LM+V ATD DSG + Y L DA F+LD T ++
Sbjct: 302 GIQLMKVSATDADSGPNAEINYLL---GPDAPPEFSLDRRTGMLTVVKKLDREKEDKYLF 358
Query: 78 -----DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--QDGLAVGRVHATDA 128
D G L+S TV + + D ND +P F Y+F VPE + G VG + TD
Sbjct: 359 TILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPENLPRHG-TVGLITVTDP 417
Query: 129 DEGQNAVVYYSV-PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D G N+ V S+ E+ F +D+ TG IR N + D EKQ+ Y
Sbjct: 418 DYGDNSAVTLSILDENDDFTIDSQTGVIRPNISFDREKQESY 459
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 10/98 (10%)
Query: 78 DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
++GG SSTA + + VTD ND +P F+ E S+PE G +V ++HATDAD G+N
Sbjct: 42 EDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGEN 101
Query: 134 AVVYYSVPEDIP------FVVDANTGDIRTNKALDYEK 165
A +++S + F ++A TG I + LD E+
Sbjct: 102 AKIHFSFSNLVSNIARRLFHLNATTGLITIKEPLDREE 139
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+ +A + I+V D ND P F S+PE G+ + +V ATDAD G NA + Y +
Sbjct: 266 LNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGIQLMKVSATDADSGPNAEINYLL 325
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLYL 170
D P F +D TG + K LD EK+ YL
Sbjct: 326 GPDAPPEFSLDRRTGMLTVVKKLDREKEDKYL 357
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 71/171 (41%), Gaps = 34/171 (19%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP---------------I 76
T+ + TD D G V +LD N D F +D T P +
Sbjct: 408 TVGLITVTDPDYGDNSAVTLSILDENDD----FTIDSQTGVIRPNISFDREKQESYTFYV 463
Query: 77 QDEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFS----VPEGQDGLAVGRVHATDA 128
+ E G SS+A V I V D+ND P F PY +S +P G V +V A D
Sbjct: 464 KAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYELVLPSTNPGTVVFQVIAVDN 523
Query: 129 DEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
D G NA V YS+ D+ F +D TG+I + D L L RV +
Sbjct: 524 DTGMNAEVRYSIVGGNTRDL-FAIDQETGNITLMEKCDV--TDLGLHRVLV 571
>gi|270006423|gb|EFA02871.1| cadherin-like protein [Tribolium castaneum]
Length = 3284
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 25/177 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE---- 71
+L Y + + LG T++ V A+D D G G++ Y++ N F +DP +
Sbjct: 1414 ALSYQVIVPENEPLGSTILTVNASDDDQGPNGMIRYKISGGN--ERKEFAVDPYSGAVTI 1471
Query: 72 ------------HQGPIQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
H ++ G S+TA + I +TDIND +P F YE + E
Sbjct: 1472 LQPLDYDTIQEYHLNITAEDLGFKPQSTTAMLTITLTDINDNSPTFNQSIYEAYISENLP 1531
Query: 117 GLA-VGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ V +V ATD D +NA++ YS+ P+ F +D TG + + DYE+ LY
Sbjct: 1532 PNSFVFQVKATDIDSPKNAIIQYSISDGPDKDMFAIDQKTGRVTAKYSFDYEENDLY 1588
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 91/188 (48%), Gaps = 26/188 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
S + + +LG ++QV ++DKD G Y +N F +DP + +
Sbjct: 1097 SRLFSVNVTENADLGSFVIQVTSSDKDIGDNANATYSFTEN---PGEKFKIDPISGNVTV 1153
Query: 76 I-------QDE---------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGL 118
+ QDE G + + I + D ND PEF+ Y F+ PE Q D +
Sbjct: 1154 VGHLDREQQDEYLLKVAAVDGAWKAETPLTITIQDQNDNAPEFEHSFYSFNFPELQRDVV 1213
Query: 119 AVGRVHATDAD-EGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL--ERV 173
VG+V ATD D +G N+V+ YS+ P D+ F VD +GDI + ++L ++ Q+ E +
Sbjct: 1214 FVGQVAATDRDKQGPNSVISYSLQQPSDL-FTVDPASGDIFSKRSLRFKYTQMEASPENM 1272
Query: 174 FLISKFAT 181
+ ++ AT
Sbjct: 1273 YSLTILAT 1280
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 78/158 (49%), Gaps = 19/158 (12%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYFN-LDPATE--HQGPIQ 77
G ++ VKA D D+ G++EY L LD NT + + LD T+ ++ ++
Sbjct: 60 GQSVATVKADDPDT--IGVLEYSLIRGDDGHFVLDKNTGVLTLVDSLDRETKDVYKLTVR 117
Query: 78 DEGGLSSTATV-NIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAV 135
G T TV +++TD ND P F Y F +PE Q G VG+V A DAD G NA
Sbjct: 118 ASDGNQHTDTVLTVQITDTNDNPPAFLETAYSFDIPENAQRGHKVGQVKAVDADLGINAQ 177
Query: 136 VYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYL 170
+ YSV D F ++ TG LDYE+ Q Y+
Sbjct: 178 LTYSVISDWANDVFSLNPQTGVFTLTSRLDYEEVQHYI 215
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 24/165 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA---TEHQGPIQDEGGLSST 85
+ +M VKA DKD G+ G +EY L ++ + + F+L P G I E + T
Sbjct: 369 INTVVMAVKAIDKDEGRNGYIEYSLSPDSASSGT-FSLGPVDGLLRVSGRIDRETKSNYT 427
Query: 86 ATVN----------------IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
++ +R+ D ND +P F Y S+ E G +V +V ATD
Sbjct: 428 LSITARDRGDPPRATHTKIFVRILDENDNSPVFDPKQYSASIAENASIGASVLQVSATDV 487
Query: 129 DEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
D+G N V YS+ + F + +TG +R K L+YE++ Y+
Sbjct: 488 DDGLNGRVRYSINSGDTNRDFSIAEDTGVVRVAKNLNYERKSRYV 532
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 80/181 (44%), Gaps = 32/181 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD------------------- 59
Y A + +G +++QV ATD D G G V Y + +T+
Sbjct: 465 YSASIAENASIGASVLQVSATDVDDGLNGRVRYSINSGDTNRDFSIAEDTGVVRVAKNLN 524
Query: 60 ---AASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPY-----EFSV 111
+ Y A + G + E + TA + I V+DIND P F PY E ++
Sbjct: 525 YERKSRYVLTVRAEDCAGDVGGEVVRADTAEIVISVSDINDNPPTFLDSPYLAYVMENTI 584
Query: 112 PEGQDGLAVGRVHATDADEGQ-NAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQL 168
P +G V V A DAD N++V Y + E P F ++A+TG+I +ALD E Q
Sbjct: 585 PP--NGGYVITVQAYDADTPPLNSLVRYFIKEGKPDTFKINASTGEISLLRALDREAQAE 642
Query: 169 Y 169
Y
Sbjct: 643 Y 643
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 86/178 (48%), Gaps = 20/178 (11%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-----NTDAAS---YFN- 65
+S Y A ++ +++V A D DSG+ G V Y+L D+ D+ S Y N
Sbjct: 993 NSNLYNASILEEESPPQLVVKVSAEDLDSGENGQVTYKLTDDFDGTFEIDSESGEIYTNA 1052
Query: 66 -LD----PATEHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
LD PA E D+G ++ TATV + V D ND P F L + +V E D G
Sbjct: 1053 RLDREETPAYELTVEALDQGVPQMTGTATVLVTVLDKNDNPPRFSRL-FSVNVTENADLG 1111
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERV 173
V +V ++D D G NA YS E+ F +D +G++ LD E+Q YL +V
Sbjct: 1112 SFVIQVTSSDKDIGDNANATYSFTENPGEKFKIDPISGNVTVVGHLDREQQDEYLLKV 1169
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 80/186 (43%), Gaps = 30/186 (16%)
Query: 7 PSALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL 66
P A T+ S A+ H++G QVKA D D G + Y ++ + A F+L
Sbjct: 140 PPAFLETAYSFDIPENAQRGHKVG----QVKAVDADLGINAQLTYSVISDW--ANDVFSL 193
Query: 67 DPAT------------EHQGPI-----QDEG--GLSSTATVNIRVTDINDKNPEFQSLPY 107
+P T E Q I QD G LSST TV V D+ND P F + Y
Sbjct: 194 NPQTGVFTLTSRLDYEEVQHYILVVQAQDAGHPALSSTLTVYCNVLDLNDNTPLFDPMSY 253
Query: 108 EFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDY 163
+ E + V ATD D G N + + + E+ F + N G + T K LD
Sbjct: 254 TNEIFENVSIATPIVTVSATDLDSGDNGKIVFRITAGDENGDFEMTPN-GTVITKKELDR 312
Query: 164 EKQQLY 169
E+Q LY
Sbjct: 313 ERQGLY 318
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+ T TV I V D+ND PEF+ Y ++ E V ATD D G NA + YS+
Sbjct: 657 LTGTGTVKIIVQDVNDHTPEFKRQSYHATINENSPLSTWVVTPTATDKDIGLNAKIRYSL 716
Query: 141 PEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
D F +D + G I T+ LD E+ ++Y
Sbjct: 717 LGDKVDRFKIDQDAGIITTSAILDREETEIY 747
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L + + I VTD ND +P F S Y S+ E + V +V A D D G+N V Y +
Sbjct: 972 LRTVLQLTINVTDANDNSPVFNSNLYNASILEEESPPQLVVKVSAEDLDSGENGQVTYKL 1031
Query: 141 PEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
+D F +D+ +G+I TN LD E+ Y
Sbjct: 1032 TDDFDGTFEIDSESGEIYTNARLDREETPAY 1062
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 20/154 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRL----------LDNNTDAAS------YFNLDPATEHQGPI 76
+ QVKATD DS K +++Y + +D T + Y D T +
Sbjct: 1536 VFQVKATDIDSPKNAIIQYSISDGPDKDMFAIDQKTGRVTAKYSFDYEENDLYTINIVAS 1595
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAV 135
+ + A + + + +N+ P F + F V E + G VG V ATD D G +
Sbjct: 1596 NPDSPMFGIAELRVHINGVNEYYPRFIQPVFHFDVSESAEVGTQVGTVQATDQDAGDDGK 1655
Query: 136 VYY---SVPEDIPFVVDANTGDIRTNKALDYEKQ 166
VYY D F +++ +G I +++LD E Q
Sbjct: 1656 VYYLFVGSSNDRGFNINSESGVISVSRSLDRETQ 1689
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 70/166 (42%), Gaps = 27/166 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLL--DNNTD------------------AASYFNLDP 68
+ ++ V ATD DSG G + +R+ D N D +NL
Sbjct: 263 IATPIVTVSATDLDSGDNGKIVFRITAGDENGDFEMTPNGTVITKKELDRERQGLYNLVV 322
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATD 127
Q D+ LSST V I + D+ND +PEF + P E SV E V V A D
Sbjct: 323 TATDQAKPPDQR-LSSTVQVTIILKDVNDMSPEFVT-PNETSVAENIAINTVVMAVKAID 380
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
DEG+N + YS+ D F + G +R + +D E + Y
Sbjct: 381 KDEGRNGYIEYSLSPDSASSGTFSLGPVDGLLRVSGRIDRETKSNY 426
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP---E 142
TV + VT N P F +L Y+ VPE + G + V+A+D D+G N ++ Y + E
Sbjct: 1397 TVTLVVTGENKYMPVFTALSYQVIVPENEPLGSTILTVNASDDDQGPNGMIRYKISGGNE 1456
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
F VD +G + + LDY+ Q Y
Sbjct: 1457 RKEFAVDPYSGAVTILQPLDYDTIQEY 1483
Score = 42.4 bits (98), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 73/168 (43%), Gaps = 29/168 (17%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPI 76
E+G + V+ATD+D+G G V Y + ++ D FN++ + E Q I
Sbjct: 1635 EVGTQVGTVQATDQDAGDDGKVYYLFVGSSNDRG--FNINSESGVISVSRSLDRETQSRI 1692
Query: 77 ------QDEGGL----SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHA 125
++ GG+ + A V + V D ND PEF YE + EG G V V A
Sbjct: 1693 VLTIMAKNAGGIRGNDTDEAQVIVEVQDGNDP-PEFLQTLYEVEISEGAPVGSKVTAVKA 1751
Query: 126 TDAD-EGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D D QN YS+ + F +D +G I T + LD E Y
Sbjct: 1752 VDKDVRPQNNQFSYSIIGGNIEQAFKIDPQSGQIETARFLDRETTPEY 1799
Score = 39.3 bits (90), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV--PEDI 144
+ I+V D ND P F+ P +S+ E G +V V A D D V+ YS+ +D
Sbjct: 30 IQIKVLDKNDSPPSFKDTPLYYSISEDLGPGQSVATVKADDPD--TIGVLEYSLIRGDDG 87
Query: 145 PFVVDANTGDIRTNKALDYEKQQLY 169
FV+D NTG + +LD E + +Y
Sbjct: 88 HFVLDKNTGVLTLVDSLDRETKDVY 112
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 71/175 (40%), Gaps = 44/175 (25%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y A + L ++ ATDKD G + Y LL + D F +D QD
Sbjct: 682 YHATINENSPLSTWVVTPTATDKDIGLNAKIRYSLLGDKVDR---FKID---------QD 729
Query: 79 EGGLSSTATVN-----------------------------IRVTDINDKNPEFQSLPYEF 109
G ++++A ++ I VTD ND +P F S YE
Sbjct: 730 AGIITTSAILDREETEIYYFTVMAQDCSATEPRAAAVNLTITVTDENDNSPSFSSTKYEV 789
Query: 110 SVPEG-QDGLAVGRVHATDADEGQNAVVYYSVP-EDIP-FVVDANTGDIRTNKAL 161
++ + + G V A+D D G N+ + Y++ E P F ++ TG I+ + L
Sbjct: 790 NISDKTKAGEFVFGARASDDDIGINSKISYALTGEHAPNFTINPETGVIKAAQDL 844
>gi|198475184|ref|XP_002132853.1| GA26057 [Drosophila pseudoobscura pseudoobscura]
gi|198138709|gb|EDY70255.1| GA26057 [Drosophila pseudoobscura pseudoobscura]
Length = 3586
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 82/176 (46%), Gaps = 24/176 (13%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + + G +++QV A D+D G ++ Y L + A +F +DP T
Sbjct: 507 LYHANVMEVADPGTSVLQVLAHDRDEGLNSVLSYALAETPETHAQWFQIDPQTGLITTRS 566
Query: 71 ---------EHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
I +GG LSSTATV + + D+ND P F Y SV E + G
Sbjct: 567 HIDCETEPVPQLTVIARDGGQPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVG 626
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
+ +V A+D D G NA+V Y++ E F V + +G+I LD+E++ Y
Sbjct: 627 RCILKVSASDPDCGVNAMVNYTLGEGFKHLTEFEVRSASGEICIAGELDFERRSSY 682
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 34/185 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-------------NNTDAASYFN 65
Y + + ++QV ATD D+G + YR++D ++D A +F
Sbjct: 1038 YAVNVSESRPVNSQIVQVNATDLDTGNNARITYRIVDAGADNATAPAAAGGSSDVALHFG 1097
Query: 66 LDPATEH---QGPI----QDEGGLSSTATVN------------IRVTDINDKNPEFQSLP 106
+ P + + P+ +D L AT N +RV D ND +P F
Sbjct: 1098 IFPNSGWIYLRAPLDRETRDRYQLVILATDNGTPAAHARTRVLVRVLDANDNDPRFLRPQ 1157
Query: 107 YEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYS-VPEDIPFVVDANTGDIRTNKALDYE 164
YEF + E + G VG V A D D G+NA V YS +P + F V TG+I T + LD E
Sbjct: 1158 YEFRIEENLRRGSVVGAVAARDLDLGENAAVRYSLLPANSSFQVHPVTGEISTREPLDRE 1217
Query: 165 KQQLY 169
+ LY
Sbjct: 1218 LRALY 1222
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 77/168 (45%), Gaps = 33/168 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI---------- 76
G + V A D D G+ V Y LL N S F + P T + P+
Sbjct: 1169 GSVVGAVAARDLDLGENAAVRYSLLPAN----SSFQVHPVTGEISTREPLDRELRALYDL 1224
Query: 77 ----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYE--FSVPEGQD-GLAVGRVHATD 127
+D+G S+ A V + V+D+ND PE P E SV E Q G V R+ ATD
Sbjct: 1225 VVEARDQGTPVRSARAPVRVHVSDVNDNAPEIAD-PQEDVVSVREEQPPGTEVVRIRATD 1283
Query: 128 ADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
D GQNA + YS+ + F +D TG IRT LD+E++ +Y
Sbjct: 1284 RDHGQNASITYSIVKGRDSDGHGLFSIDPATGVIRTRVVLDHEERSIY 1331
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L TVNI + D+ND P F Y +VPE G +V +V+A+D D +N +V Y++
Sbjct: 265 LRGLMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDAEENGLVEYAI 324
Query: 141 -----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ F +D TG I NKALD+E ++L+
Sbjct: 325 NRRQSDKEQMFRIDPQTGAIFINKALDFETKELH 358
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 22/160 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------EHQGPIQDEG 80
G + V AT D+ V Y + + D YF ++ + +H+ Q
Sbjct: 842 GTVVGSVIATSGDTAHRSPVRYSIYSGDPDG--YFGIEGGSGNIRIARPLDHEAKGQVLL 899
Query: 81 GLSSTA---------TVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
+ +TA VNI V D+ND PEF++ SVPE D G + HA D D
Sbjct: 900 NIQATAGEPPVYGHTQVNIEVEDVNDNAPEFEASLVRISVPENADLGAPLYAAHAHDKDS 959
Query: 131 GQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + V YS+ E F +D +G + ++ LDYE Q +
Sbjct: 960 GSSGQVTYSLARERQLFAIDPRSGHLVLSQHLDYETSQRH 999
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 76/182 (41%), Gaps = 45/182 (24%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y A + LG +++++KATD D G V RL+ ++L T+ Q I
Sbjct: 1964 YVASVAEDAPLGASVVRIKATDADLG----VNARLV---------YSLANETQWQFAIDS 2010
Query: 79 EGGL------------------------------SSTATVNIRVTDINDKNPEFQSLPYE 108
+ GL S+ V I V D+ND P F+ PY
Sbjct: 2011 KSGLITTVGKLDRELQSSYSFMVLATDGGRYEVRSARVAVQINVLDVNDNRPVFERYPYI 2070
Query: 109 FSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQ 166
VP Q G + +V A DAD+G N + YS+ D F ++ NTG + ++L E
Sbjct: 2071 GQVPALIQPGQTLLKVQAHDADQGLNGELLYSLKGDAGKFRINPNTGALSATQSLASESG 2130
Query: 167 QL 168
+L
Sbjct: 2131 RL 2132
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 77/183 (42%), Gaps = 27/183 (14%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY--------------RLLDNNTDA 60
D FY + +G +++V A+D D G +V Y R
Sbjct: 611 DQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTLGEGFKHLTEFEVRSASGEICI 670
Query: 61 ASYFNLDPATEHQGPI--QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG---- 114
A + + + ++ P+ D GGLS+TA + +++TD+ND P F Y S+ E
Sbjct: 671 AGELDFERRSSYEFPVLATDRGGLSTTAMIKMQLTDVNDNRPVFYPREYNVSLKESPPTQ 730
Query: 115 --QDGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNK--ALDYEKQQ 167
+ V V ATD D G V Y + E F +D ++G+I + +L Q
Sbjct: 731 TPAASIPVVAVVATDPDSGSFGQVSYRIVAGNEAGIFRIDRSSGEIFVTRPDSLSVRTQP 790
Query: 168 LYL 170
+++
Sbjct: 791 MHM 793
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 86 ATVNIRVTDINDKNPEFQ-SLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
ATV I + D+ND PEF+ Y SVPE + + + V A+D DEG NA + YS+
Sbjct: 1838 ATVVITIGDVNDNAPEFRPGSCYGLSVPENSEAVVIHTVVASDMDEGPNADIIYSITGGN 1897
Query: 143 -DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
F +DA +G++ + + LD E+ Y +V
Sbjct: 1898 LGNKFSIDARSGEL-SCRPLDREQHARYTLQV 1928
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 69/167 (41%), Gaps = 31/167 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--FNLDPATEHQGPI---------- 76
+G ++ Q A+D D G FG + Y L + D +S+ F +D H G +
Sbjct: 2881 VGSSVFQAHASDLDRGPFGALNYSLAPASGDDSSWKLFRVD---SHSGMVSSAAVFDFEQ 2937
Query: 77 ----------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ---DGLAVGRV 123
D GG + V + V ++ P+F Y F +P G VG+V
Sbjct: 2938 RQRYDMELRASDMGGKGARVAVRVEVDSRDEFAPQFSERTYRFVLPAAAALPQGFVVGQV 2997
Query: 124 HATDADEGQNAVVYY--SVPEDIPFVVDANTGDIRTNKALDYEKQQL 168
ATDAD G + V Y S P F V+ ++G + + L + L
Sbjct: 2998 TATDADSGPDGRVVYQLSAPH-THFKVNRSSGAVLIKRKLKLDDDSL 3043
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L ++ ++ +R+TD+ND PEF+ Y +V E D G +V +V A D DEG N+V+ Y++
Sbjct: 483 LHASKSIFLRITDVNDNPPEFEQELYHANVMEVADPGTSVLQVLAHDRDEGLNSVLSYAL 542
Query: 141 PEDIP-----FVVDANTGDIRTNKALDYEKQ 166
E F +D TG I T +D E +
Sbjct: 543 AETPETHAQWFQIDPQTGLITTRSHIDCETE 573
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 10/106 (9%)
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
A GPI LSS A + + + D ND +P+F + +V EG G V +V A D
Sbjct: 2298 ARSSDGPI-----LSSCAELVVELQDENDNSPQFSQRQFVATVSEGNSKGTFVAQVQAFD 2352
Query: 128 ADEGQNAVVYYSVPE---DIPFVVD-ANTGDIRTNKALDYEKQQLY 169
+D G NA + Y + + D FV++ A +G ++TN LD E + +Y
Sbjct: 2353 SDAGANARLRYHIVDGNHDNAFVIEPAFSGIVKTNIVLDREIRDVY 2398
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 55/147 (37%), Gaps = 21/147 (14%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--ATEHQGPIQDEGGLSSTATVNIRVTDI 95
A D D LV RLLD A + T P SS TV I V D+
Sbjct: 1430 AFDIDRHTGSLVVARLLDREVQAEFRLEIRALDTTASNNP------QSSAVTVKIEVADV 1483
Query: 96 NDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP--------- 145
ND P + P E + E G V ATDAD G N + Y + P
Sbjct: 1484 NDNAPHWPRDPVELRLSEATAVGAVVHNFTATDADTGTNGELQYRLLRYFPLLNETQEQA 1543
Query: 146 ---FVVDANTGDIRTNKALDYEKQQLY 169
F VD+ TG + LD+E Q Y
Sbjct: 1544 APVFAVDSLTGSLSLQAPLDFEAVQEY 1570
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 19/101 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------- 71
Y A + +G +++QV A+D D+ + GLVEY + +D F +DP T
Sbjct: 290 YFATVPENATVGTSVLQVYASDTDAEENGLVEYAINRRQSDKEQMFRIDPQTGAIFINKA 349
Query: 72 --------HQGPI----QDEGGLSSTATVNIRVTDINDKNP 100
H+ + E L +TA V+IRVTD+ND P
Sbjct: 350 LDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQP 390
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI-- 144
+ + V D ND P F Y SV E G +V R+ ATDAD G NA + YS+ +
Sbjct: 1945 ITVLVEDQNDNAPRFDLPKYVASVAEDAPLGASVVRIKATDADLGVNARLVYSLANETQW 2004
Query: 145 PFVVDANTGDIRTNKALDYEKQQLY 169
F +D+ +G I T LD E Q Y
Sbjct: 2005 QFAIDSKSGLITTVGKLDRELQSSY 2029
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 24/133 (18%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD--------- 78
+LG L A DKDSG G V Y L F +DP + H Q
Sbjct: 944 DLGAPLYAAHAHDKDSGSSGQVTYSLARER----QLFAIDPRSGHLVLSQHLDYETSQRH 999
Query: 79 -------EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+GG L++ T+ + V D+ND P F+ Y +V E + + +V+ATD
Sbjct: 1000 SLVVTATDGGVPPLATNLTILVDVQDVNDNPPVFERDEYAVNVSESRPVNSQIVQVNATD 1059
Query: 128 ADEGQNAVVYYSV 140
D G NA + Y +
Sbjct: 1060 LDTGNNARITYRI 1072
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 73/171 (42%), Gaps = 38/171 (22%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------------ 77
G + QV+A D D+G + Y ++D N D A F ++PA G ++
Sbjct: 2342 GTFVAQVQAFDSDAGANARLRYHIVDGNHDNA--FVIEPA--FSGIVKTNIVLDREIRDV 2397
Query: 78 --------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEF-SVPEGQD-GLAVGRVHA 125
DEG ++ T+TV +++ D+ND P F P +V E + G + + A
Sbjct: 2398 YNLKIIATDEGVPQMTGTSTVRVQIVDVNDNQPTFP--PNNLVTVSEATELGAVIASISA 2455
Query: 126 TDADEGQNAVVYYSVPED-------IPFVVDANTGDIRTNKALDYEKQQLY 169
D D + Y V E F +D +G + + LDYE QQ Y
Sbjct: 2456 NDVDT-YPTLTYRLVSESSVDDESLTLFALDRYSGKLVLKRRLDYEVQQEY 2505
Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 21/121 (17%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT---------EHQ 73
R++ G +++++ATD+D G+ + Y ++ ++D F++DPAT +H+
Sbjct: 1267 REEQPPGTEVVRIRATDRDHGQNASITYSIVKGRDSDGHGLFSIDPATGVIRTRVVLDHE 1326
Query: 74 -------GPIQDEGGLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGR 122
G +GG T + + V D+ND P F S F V E G VG
Sbjct: 1327 ERSIYRLGVAATDGGQPPKETLRMLRVEVLDLNDNRPTFTSSSLVFRVREDAHVGHVVGS 1386
Query: 123 V 123
+
Sbjct: 1387 I 1387
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 66/171 (38%), Gaps = 38/171 (22%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLL-------DNNTDAASYFNLDPAT---EHQGPIQD 78
+G + ATD D+G G ++YRLL + AA F +D T Q P+
Sbjct: 1505 VGAVVHNFTATDADTGTNGELQYRLLRYFPLLNETQEQAAPVFAVDSLTGSLSLQAPLDF 1564
Query: 79 EG-------------------GLSSTATVNIRVTDINDKNPEFQSLPYE------FSVPE 113
E L ++ TV +RV D ND PEF S + F
Sbjct: 1565 EAVQEYTLIVQALDQSSNASERLQTSVTVRLRVLDANDNAPEFVSPLAKGGSASVFLSDA 1624
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKAL 161
+ G V V A D D G N + Y + + F + A TG I K+L
Sbjct: 1625 TRIGETVAHVVALDRDAGDNGRLAYDIEGGNGEGRFRISAATGVIELVKSL 1675
Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 33/162 (20%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNT---DAASYFNLDPAT-------------- 70
ELG + + A D D+ + + YRL+ ++ ++ + F LD +
Sbjct: 2445 ELGAVIASISANDVDT--YPTLTYRLVSESSVDDESLTLFALDRYSGKLVLKRRLDYEVQ 2502
Query: 71 -EHQ-GPIQDEGGLSSTATVNIRVTDINDKNPEF--QSLPYEF----SVPEGQDGLAVG- 121
E+Q I + + T+ +RV D ND P F Q P F +V E D L++
Sbjct: 2503 QEYQLEVIASDAAHEARTTLTVRVNDENDNAPVFLAQQPPAYFAILPAVAEVADSLSMDL 2562
Query: 122 ---RVHATDAD-EGQNAVVYYSV-PEDIPFVVDANTGDIRTN 158
V+ATDAD EG N+ + YS+ P F V A++G + N
Sbjct: 2563 ELLSVNATDADAEGSNSKIRYSIDPPVEGFSVGASSGVVSVN 2604
Score = 35.4 bits (80), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 12/124 (9%)
Query: 54 LDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
LD ++ A SY + A + P L S ++ + D ND P+F Y + E
Sbjct: 2822 LDYDSGATSYELIIRACDSHHPRP----LCSLQPFHLELHDENDNEPKFPLSEYVHFIAE 2877
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYSVP----EDIP---FVVDANTGDIRTNKALDYEK 165
+ G +V + HA+D D G + YS+ +D F VD+++G + + D+E+
Sbjct: 2878 NEPVGSSVFQAHASDLDRGPFGALNYSLAPASGDDSSWKLFRVDSHSGMVSSAAVFDFEQ 2937
Query: 166 QQLY 169
+Q Y
Sbjct: 2938 RQRY 2941
>gi|357623110|gb|EHJ74394.1| dachsous [Danaus plexippus]
Length = 463
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 74/164 (45%), Gaps = 34/164 (20%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------------- 76
A D+D G F Y ++ NTD A F L E G +
Sbjct: 20 AKDQDLGVFNTQRYNIVSGNTDNA--FKLSSHRERDGVLYLDLQINGFLDRETTDHYELV 77
Query: 77 --QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
+GG L T TVNI + D+ND P F Y +PE G V +V A D+DE
Sbjct: 78 IEALDGGTPPLRGTMTVNITILDVNDNPPVFAESAYSAMIPENATVGTTVLKVFAIDSDE 137
Query: 131 GQNAVVYYSV-----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G+N V+ YS+ D F ++ +TG+I NK LD+E ++L+
Sbjct: 138 GENGVIEYSINRRQSDRDNMFKINPDTGEIIVNKLLDFETKELH 181
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV 140
L ++ + + VTDIND P F Y+ +VPE G V +V A DADEG+N+ + YS+
Sbjct: 306 LHASRIITLLVTDINDNPPTFLESEYKANVPEAAAPGTPVLQVSAFDADEGENSEIRYSI 365
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQL 168
P+ F +D +G + T +D E +
Sbjct: 366 LPSPQSDWFSIDERSGLVTTRVRVDCETNPM 396
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 19/101 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------- 71
Y AM + +G T+++V A D D G+ G++EY + +D + F ++P T
Sbjct: 113 YSAMIPENATVGTTVLKVFAIDSDEGENGVIEYSINRRQSDRDNMFKINPDTGEIIVNKL 172
Query: 72 --------HQGPI--QDEGG--LSSTATVNIRVTDINDKNP 100
H+ + +D+G L +TA V+IRVTD+ND P
Sbjct: 173 LDFETKELHELVVVARDKGAQPLETTAFVSIRVTDVNDNQP 213
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 52/122 (42%), Gaps = 24/122 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------- 67
Y A + G ++QV A D D G+ + Y +L + + +F++D
Sbjct: 331 YKANVPEAAAPGTPVLQVSAFDADEGENSEIRYSILP--SPQSDWFSIDERSGLVTTRVR 388
Query: 68 ------PATEHQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
P + D G LSSTAT+ + V D+ND P F Y +VPE + A
Sbjct: 389 VDCETNPMPKLTVVASDRGNPPLSSTATLLVTVLDVNDNEPIFDQSFYNVTVPENE---A 445
Query: 120 VG 121
VG
Sbjct: 446 VG 447
>gi|50927222|gb|AAH79761.1| Unknown (protein for MGC:86208) [Xenopus laevis]
Length = 1050
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 82/165 (49%), Gaps = 28/165 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
+M+V ATD DSG + Y +L + + A F+++P + G I+
Sbjct: 522 VMEVSATDADSGSNAQLHYSILPDPS-ARGVFSINPDS---GQIRVNMVLDREQREHYDF 577
Query: 78 -----DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
D+G L TA+V I V D ND +P+F Y FSV E L+ VG V DAD
Sbjct: 578 HVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPVGMVTVIDAD 637
Query: 130 EGQNAVVYYSV-PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
+G+NA ++ SV PE FV+ TG I ++ + D E Q Y R+
Sbjct: 638 KGENAHIHLSVEPESGEFVIQNGTGTILSSISFDREHQSTYTFRL 682
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 55/102 (53%), Gaps = 5/102 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
LSST ++ ++VTD+ND P F E PE D V V ATDAD G NA ++YS+
Sbjct: 483 LSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGSNAQLHYSI 542
Query: 141 PEDIP----FVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
D F ++ ++G IR N LD E+++ Y V + K
Sbjct: 543 LPDPSARGVFSINPDSGQIRVNMVLDREQREHYDFHVVAVDK 584
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 32/158 (20%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--QGP-------------------- 75
ATD+DSG G+ Y L+ +A F L A + + P
Sbjct: 189 ATDRDSGVNGVSSYELI-VGPEAQDLFGLQVAEDQDEKQPQLIVMGKLDREQRDSYDLTI 247
Query: 76 -IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+QD G +S+A + I + D ND P+F+ L YE +PE G +V +V A D+D+G
Sbjct: 248 KVQDGGTPARASSALLRISILDTNDNAPKFEKLAYEAELPENSPMGHSVLQVKANDSDQG 307
Query: 132 QNAVVYYSVPEDIPFV-----VDANTGDIRTNKALDYE 164
NA + YS + V +D +TG I +D E
Sbjct: 308 VNAEIDYSFHQASDTVRRLLHLDRSTGLITVQGPIDRE 345
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 77/194 (39%), Gaps = 41/194 (21%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---E 71
+ L Y A + +G +++QVKA D D G ++Y + +LD +T
Sbjct: 278 EKLAYEAELPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQASDTVRRLLHLDRSTGLIT 337
Query: 72 HQGPI--QDEGGLS--------------STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
QGPI +D G L + V I + D ND P + F + Q
Sbjct: 338 VQGPIDREDVGTLKFSVIAKDKGANPKIARTQVTITIRDTNDNRPVIEI--RGFGLVTHQ 395
Query: 116 DGLA-----------VGRVHATDADEGQNAVVYYSVPEDIPF----VVDANTGD-----I 155
G+A V V +D DEG NA V V D+PF V D T +
Sbjct: 396 GGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGTDSKKKYFL 455
Query: 156 RTNKALDYEKQQLY 169
+T +LDYE + Y
Sbjct: 456 QTTTSLDYESVKEY 469
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Query: 83 SSTATVNIRVTDINDKNPEF---QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYS 139
SS V I V D ND P ++ Y++ PE G V V A D D G NA + YS
Sbjct: 693 SSYVGVTINVLDENDNAPVIVVPSNISYKYLTPETHPGTQVNWVRAEDMDTGVNAELEYS 752
Query: 140 VPEDIP---FVVDANTGDIRTNKAL 161
+ P F + N G++ K +
Sbjct: 753 IASGNPFQLFQISPNNGEVTLEKTI 777
>gi|345311060|ref|XP_001510399.2| PREDICTED: LOW QUALITY PROTEIN: cadherin-20 [Ornithorhynchus
anatinus]
Length = 795
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 84/185 (45%), Gaps = 31/185 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV ATD D +G R++ + YF++D T
Sbjct: 163 YVATVAEMSPVGTSVIQVTATDADDPSYG-SSARVVYSILQGQPYFSVDSKTGLIRTALM 221
Query: 71 --------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
++ IQ + GGL+ TATVNI ++D+ND P F Y+ SV E
Sbjct: 222 NMDREAKESYEVIIQAKDMGGQLGGLAGTATVNISLSDVNDNPPRFPQKHYQMSVSESAP 281
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQL 168
VGRV A D DEG NA + YS+ E DI D G I K L +E ++
Sbjct: 282 VSSTVGRVFAKDPDEGINAEMTYSLLEGDGLDAFDISTDPDFQVGIITVRKPLSFETKRS 341
Query: 169 YLERV 173
Y +V
Sbjct: 342 YTLKV 346
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P F PY +V E G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 146 IKIQDINDNEPRFPDGPYVATVAEMSPVGTSVIQVTATDADDPSYGSSARVVYSILQGQP 205
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F VD+ TG IRT +D E ++ Y
Sbjct: 206 YFSVDSKTGLIRTALMNMDREAKESY 231
>gi|332259108|ref|XP_003278631.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1, partial
[Nomascus leucogenys]
Length = 2923
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 24/174 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA------------ASYFNL 66
Y R+ E+G ++ ++A+D+DS + YR+L D + +
Sbjct: 253 YRERVRENLEVGYEVLTIRASDRDSPINANLRYRVLGGAWDVFQLNESSGVVSTRAVLDR 312
Query: 67 DPATEHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-- 118
+ A E+Q ++ + G LS+TATV I V D ND P+F Y VPE GL
Sbjct: 313 EEAAEYQLLVEANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNYVVQVPE-DVGLNT 371
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLY 169
AV RV ATD D+GQNA ++YS+ F + + +G + LD+E Q Y
Sbjct: 372 AVLRVQATDRDQGQNAAIHYSILSGNVAGQFYLHSLSGILDVINPLDFEDVQKY 425
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQ-- 73
+G +++ ++A D+D+ ++ Y+L NT + LD E Q
Sbjct: 597 VGSSVLTLQARDRDANS--VITYQLTGGNTRNRFALSSQRGGGLITLALPLDYKQEQQYV 654
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G S TA V I VTD N P FQS Y SV E + G ++ + A D D G
Sbjct: 655 LAVTASDGTRSHTAHVLINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATLSANDEDTG 714
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + +P F +D ++G + T LDYE Q Y
Sbjct: 715 ENARITYVIQDPVPQFRIDPDSGTMYTMMELDYENQVAY 753
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 39/180 (21%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN--------LDP-----ATEHQGP 75
L +++V+ATD+D G+ + Y +L N Y + ++P ++
Sbjct: 369 LNTAVLRVQATDRDQGQNAAIHYSILSGNVAGQFYLHSLSGILDVINPLDFEDVQKYSLS 428
Query: 76 IQDEGG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
I+ + G ++S+ V+++V D+ND P F S P++ +V E G V + A DAD
Sbjct: 429 IKAQDGGRPPLINSSGVVSVQVLDVNDNEPIFVSSPFQATVLENVPLGYPVVHIQAVDAD 488
Query: 130 EGQNAVVYYSVPE--------------------DIPFVVDANTGDIRTNKALDYEKQQLY 169
G+NA ++Y + + D PF + ++G I LD E+ + Y
Sbjct: 489 SGENARLHYRLVDTASAFLGGGSAGPKNPAPTLDFPFQIHNSSGWITVCAELDREEVEHY 548
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 74/167 (44%), Gaps = 33/167 (19%)
Query: 32 TLMQVKATDKDSGKFGLVEY------------------------RLLDNNTDAASYFNLD 67
+++QV ATD+DSG G + Y R LD + A Y
Sbjct: 805 SILQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRE-NVAVYNLWA 863
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
A + P LS++ + + + DIND P F+ E V E G V ++HA
Sbjct: 864 LAVDRGSPTP----LSASVEIQVTILDINDNAPMFEKDELELFVEENNPVGSVVAKIHAN 919
Query: 127 DADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
D DEG NA + Y + E D+ F +D GD+R LD+E ++ Y+
Sbjct: 920 DPDEGPNAQIMYQIVEGDMRHFFQLDLLNGDLRAMVELDFEVRREYV 966
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y + +G ++ + A D+D+G+ + Y + D F +DP +
Sbjct: 686 SSHYTVSVSEDRPVGTSIATLSANDEDTGENARITYVI----QDPVPQFRIDPDSGTMYT 741
Query: 71 ------EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E+Q QD G S T T+ I + D ND P+F Y+ S+ E
Sbjct: 742 MMELDYENQVAYTLTIMAQDNGIPQKSDTTTLEILILDANDNAPQFLWDFYQGSIFEDAP 801
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ +V ATD D G N + Y+ D F ++ +G IRT + LD E +Y
Sbjct: 802 PSTSILQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRENVAVY 859
>gi|229442301|gb|AAI72919.1| cadherin EGF LAG seven-pass G-type receptor 1 [synthetic construct]
Length = 1713
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 24/174 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA------------ASYFNL 66
Y R+ E+G ++ ++A+D+DS + YR+L D + +
Sbjct: 358 YRERVRENLEVGYEVLTIRASDRDSPINANLRYRVLGGAWDVFQLNESSGVVSTRAVLDR 417
Query: 67 DPATEHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-- 118
+ A E+Q ++ + G LS+TATV I V D ND P+F Y VPE GL
Sbjct: 418 EEAAEYQLLVEANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNYVVQVPE-DVGLNT 476
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLY 169
AV RV ATD D+GQNA ++YS+ F + + +G + LD+E Q Y
Sbjct: 477 AVLRVQATDRDQGQNAAIHYSILSGNVAGQFYLHSLSGILDVINPLDFEDVQKY 530
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQ-- 73
+G +++ ++A D+D+ ++ Y+L NT + LD E Q
Sbjct: 702 VGSSVLTLQARDRDANS--VITYQLTGGNTRNRFALSSQRGGGLITLALPLDYKQEQQYV 759
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G S TA V I VTD N P FQS Y SV E + G ++ + A D D G
Sbjct: 760 LAVTASDGTRSHTAHVLINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATLSANDEDTG 819
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + +P F +D ++G + T LDYE Q Y
Sbjct: 820 ENARITYVIQDPVPQFRIDPDSGTMYTMMELDYENQVAY 858
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 39/180 (21%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN--------LDP-----ATEHQGP 75
L +++V+ATD+D G+ + Y +L N Y + ++P ++
Sbjct: 474 LNTAVLRVQATDRDQGQNAAIHYSILSGNVAGQFYLHSLSGILDVINPLDFEDVQKYSLS 533
Query: 76 IQDEGG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
I+ + G ++S+ V+++V D+ND P F S P++ +V E G V + A DAD
Sbjct: 534 IKAQDGGRPPLINSSGVVSVQVLDVNDNEPIFVSSPFQATVLENVPLGYPVVHIQAVDAD 593
Query: 130 EGQNAVVYYSVPE--------------------DIPFVVDANTGDIRTNKALDYEKQQLY 169
G+NA ++Y + + D PF + ++G I LD E+ + Y
Sbjct: 594 SGENARLHYRLVDTASTFLGGGSAGPKNPAPTPDFPFQIHNSSGWITVCAELDREEVEHY 653
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 73/167 (43%), Gaps = 33/167 (19%)
Query: 32 TLMQVKATDKDSGKFGLVEY------------------------RLLDNNTDAASYFNLD 67
+++QV ATD+DSG G + Y R LD + A Y
Sbjct: 910 SILQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRE-NVAVYNLWA 968
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
A + P LS++ + + + DIND P F+ E V E G V ++ A
Sbjct: 969 LAVDRGSPTP----LSASVEIQVTILDINDNAPMFEKDELELFVEENNPVGSVVAKIRAN 1024
Query: 127 DADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
D DEG NA + Y + E D+ F +D GD+R LD+E ++ Y+
Sbjct: 1025 DPDEGPNAQIMYQIVEGDMRHFFQLDLLNGDLRAMVELDFEVRREYV 1071
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y + +G ++ + A D+D+G+ + Y + D F +DP +
Sbjct: 791 SSHYTVSVSEDRPVGTSIATLSANDEDTGENARITYVI----QDPVPQFRIDPDSGTMYT 846
Query: 71 ------EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E+Q QD G S T T+ I + D ND P+F Y+ S+ E
Sbjct: 847 MMELDYENQVAYTLTIMAQDNGIPQKSDTTTLEILILDANDNAPQFLWDFYQGSIFEDAP 906
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ +V ATD D G N + Y+ D F ++ +G IRT + LD E +Y
Sbjct: 907 PSTSILQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRENVAVY 964
>gi|189236209|ref|XP_971084.2| PREDICTED: similar to AGAP007924-PA [Tribolium castaneum]
Length = 4974
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 25/177 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE---- 71
+L Y + + LG T++ V A+D D G G++ Y++ N F +DP +
Sbjct: 3104 ALSYQVIVPENEPLGSTILTVNASDDDQGPNGMIRYKISGGN--ERKEFAVDPYSGAVTI 3161
Query: 72 ------------HQGPIQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
H ++ G S+TA + I +TDIND +P F YE + E
Sbjct: 3162 LQPLDYDTIQEYHLNITAEDLGFKPQSTTAMLTITLTDINDNSPTFNQSIYEAYISENLP 3221
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V +V ATD D +NA++ YS+ P+ F +D TG + + DYE+ LY
Sbjct: 3222 PNSFVFQVKATDIDSPKNAIIQYSISDGPDKDMFAIDQKTGRVTAKYSFDYEENDLY 3278
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 91/188 (48%), Gaps = 26/188 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
S + + +LG ++QV ++DKD G Y +N F +DP + +
Sbjct: 2787 SRLFSVNVTENADLGSFVIQVTSSDKDIGDNANATYSFTEN---PGEKFKIDPISGNVTV 2843
Query: 76 I-------QDE---------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGL 118
+ QDE G + + I + D ND PEF+ Y F+ PE Q D +
Sbjct: 2844 VGHLDREQQDEYLLKVAAVDGAWKAETPLTITIQDQNDNAPEFEHSFYSFNFPELQRDVV 2903
Query: 119 AVGRVHATDAD-EGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL--ERV 173
VG+V ATD D +G N+V+ YS+ P D+ F VD +GDI + ++L ++ Q+ E +
Sbjct: 2904 FVGQVAATDRDKQGPNSVISYSLQQPSDL-FTVDPASGDIFSKRSLRFKYTQMEASPENM 2962
Query: 174 FLISKFAT 181
+ ++ AT
Sbjct: 2963 YSLTILAT 2970
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 78/158 (49%), Gaps = 19/158 (12%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYFN-LDPATE--HQGPIQ 77
G ++ VKA D D+ G++EY L LD NT + + LD T+ ++ ++
Sbjct: 1750 GQSVATVKADDPDT--IGVLEYSLIRGDDGHFVLDKNTGVLTLVDSLDRETKDVYKLTVR 1807
Query: 78 DEGGLSSTATV-NIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAV 135
G T TV +++TD ND P F Y F +PE Q G VG+V A DAD G NA
Sbjct: 1808 ASDGNQHTDTVLTVQITDTNDNPPAFLETAYSFDIPENAQRGHKVGQVKAVDADLGINAQ 1867
Query: 136 VYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYL 170
+ YSV D F ++ TG LDYE+ Q Y+
Sbjct: 1868 LTYSVISDWANDVFSLNPQTGVFTLTSRLDYEEVQHYI 1905
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 24/165 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA---TEHQGPIQDEGGLSST 85
+ +M VKA DKD G+ G +EY L ++ + + F+L P G I E + T
Sbjct: 2059 INTVVMAVKAIDKDEGRNGYIEYSLSPDSASSGT-FSLGPVDGLLRVSGRIDRETKSNYT 2117
Query: 86 ATVN----------------IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
++ +R+ D ND +P F Y S+ E G +V +V ATD
Sbjct: 2118 LSITARDRGDPPRATHTKIFVRILDENDNSPVFDPKQYSASIAENASIGASVLQVSATDV 2177
Query: 129 DEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
D+G N V YS+ + F + +TG +R K L+YE++ Y+
Sbjct: 2178 DDGLNGRVRYSINSGDTNRDFSIAEDTGVVRVAKNLNYERKSRYV 2222
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 75/165 (45%), Gaps = 33/165 (20%)
Query: 35 QVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA-----TEH----------------- 72
++ ATD+D G+ + + L ++ +D F +DP T H
Sbjct: 1110 KLTATDRDIGRNAELIFSLSNSQSD----FVIDPKNGFIKTLHVFDREELVQTTGLNYLS 1165
Query: 73 -QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+ + D G L VN+ VTD+ND P+F PY V EG G V R+ +DA
Sbjct: 1166 LEATVTDNGSPRLRDKVKVNVYVTDVNDNPPKFLRTPYRVQVSEGSPVGTQVIRLFTSDA 1225
Query: 129 DEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
DEG N V+YS+ + D F ++ TG I +K LD E YL
Sbjct: 1226 DEGLNGDVFYSIVQGNDDGRFTIEEATGQIILSKILDRETVSNYL 1270
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 78/164 (47%), Gaps = 33/164 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-------------LDNNT-----------DAASYFN 65
G + + A+D D G G V Y L LD+ T + S++
Sbjct: 589 GTLIAMLTASDHDQGTNGSVAYSLHPVTQQHYDNVLVLDSLTGQLTTRKKLDREEISHYE 648
Query: 66 LDPATEHQG-PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRV 123
+ + QG P Q SSTATV + V D+ND +PEF L Y +VPE + G ++ +V
Sbjct: 649 IHVIAKDQGLPPQ-----SSTATVYLNVIDVNDNSPEFYPLNYFVAVPENVKPGSSLVKV 703
Query: 124 HATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEK 165
A+D DEG+NA++ Y++ D F +D TG I L + K
Sbjct: 704 TASDRDEGENAIITYNLESGGDDLFTIDEWTGVITIRGDLKWTK 747
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 78/179 (43%), Gaps = 28/179 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD------------------- 59
Y A + +G +++QV ATD D G G V Y + +T+
Sbjct: 2155 YSASIAENASIGASVLQVSATDVDDGLNGRVRYSINSGDTNRDFSIAEDTGVVRVAKNLN 2214
Query: 60 ---AASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ- 115
+ Y A + G + E + TA + I V+DIND P F PY V E
Sbjct: 2215 YERKSRYVLTVRAEDCAGDVGGEVVRADTAEIVISVSDINDNPPTFLDSPYLAYVMENTI 2274
Query: 116 --DGLAVGRVHATDADEGQ-NAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+G V V A DAD N++V Y + E P F ++A+TG+I +ALD E Q Y
Sbjct: 2275 PPNGGYVITVQAYDADTPPLNSLVRYFIKEGKPDTFKINASTGEISLLRALDREAQAEY 2333
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 86/178 (48%), Gaps = 20/178 (11%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-----NTDAAS---YFN- 65
+S Y A ++ +++V A D DSG+ G V Y+L D+ D+ S Y N
Sbjct: 2683 NSNLYNASILEEESPPQLVVKVSAEDLDSGENGQVTYKLTDDFDGTFEIDSESGEIYTNA 2742
Query: 66 -LD----PATEHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
LD PA E D+G ++ TATV + V D ND P F L + +V E D G
Sbjct: 2743 RLDREETPAYELTVEALDQGVPQMTGTATVLVTVLDKNDNPPRFSRL-FSVNVTENADLG 2801
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERV 173
V +V ++D D G NA YS E+ F +D +G++ LD E+Q YL +V
Sbjct: 2802 SFVIQVTSSDKDIGDNANATYSFTENPGEKFKIDPISGNVTVVGHLDREQQDEYLLKV 2859
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 78/178 (43%), Gaps = 32/178 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-- 76
Y + +G ++++ +D D G G V Y ++ N D F ++ AT G I
Sbjct: 1203 YRVQVSEGSPVGTQVIRLFTSDADEGLNGDVFYSIVQGNDDGR--FTIEEAT---GQIIL 1257
Query: 77 ------------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
+D G LSST TV++ V D ND +PEF + SV E
Sbjct: 1258 SKILDRETVSNYLLTVVARDAGQMRQLSSTTTVSVEVMDENDNSPEFTQTNSKISVIETT 1317
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ + ATDAD G N+ V +S+ F VD ++G + +K LDYE+ Y
Sbjct: 1318 PVNTELIQFRATDADLGMNSEVVFSISAGNRKDTFHVDPSSGTLYLHKPLDYEELSAY 1375
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 80/186 (43%), Gaps = 30/186 (16%)
Query: 7 PSALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL 66
P A T+ S A+ H++G QVKA D D G + Y ++ + A F+L
Sbjct: 1830 PPAFLETAYSFDIPENAQRGHKVG----QVKAVDADLGINAQLTYSVISDW--ANDVFSL 1883
Query: 67 DPAT------------EHQGPI-----QDEG--GLSSTATVNIRVTDINDKNPEFQSLPY 107
+P T E Q I QD G LSST TV V D+ND P F + Y
Sbjct: 1884 NPQTGVFTLTSRLDYEEVQHYILVVQAQDAGHPALSSTLTVYCNVLDLNDNTPLFDPMSY 1943
Query: 108 EFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDY 163
+ E + V ATD D G N + + + E+ F + N G + T K LD
Sbjct: 1944 TNEIFENVSIATPIVTVSATDLDSGDNGKIVFRITAGDENGDFEMTPN-GTVITKKELDR 2002
Query: 164 EKQQLY 169
E+Q LY
Sbjct: 2003 ERQGLY 2008
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 71/167 (42%), Gaps = 28/167 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVE-YRLLDNNTD-------------AASYFNLDPA----TE 71
G L+ ATDKD G G+ + YR++D N D SY +L+ E
Sbjct: 145 GTRLLLDAATDKDIGTNGVSDDYRIIDGNKDDKFRLALTVNPAGETSYLHLETTGKLDRE 204
Query: 72 HQG------PIQDEGGLSSTA--TVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGR 122
QG +D G VN+ + D+ND P F Y S+ E G V +
Sbjct: 205 SQGFYFLNISARDGGAPPKFGYLQVNVTILDVNDNPPIFDHSDYIVSLNESVLPGTPVLQ 264
Query: 123 VHATDADEGQNA-VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQL 168
V ATD D G NA + YY + F VD TG I T + L+ +Q
Sbjct: 265 VMATDNDLGDNAKITYYLADTERQFTVDPETGVISTTETLECPQQNC 311
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+ T TV I V D+ND PEF+ Y ++ E V ATD D G NA + YS+
Sbjct: 2347 LTGTGTVKIIVQDVNDHTPEFKRQSYHATINENSPLSTWVVTPTATDKDIGLNAKIRYSL 2406
Query: 141 PEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
D F +D + G I T+ LD E+ ++Y
Sbjct: 2407 LGDKVDRFKIDQDAGIITTSAILDREETEIY 2437
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L + + I VTD ND +P F S Y S+ E + V +V A D D G+N V Y +
Sbjct: 2662 LRTVLQLTINVTDANDNSPVFNSNLYNASILEEESPPQLVVKVSAEDLDSGENGQVTYKL 2721
Query: 141 PEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
+D F +D+ +G+I TN LD E+ Y
Sbjct: 2722 TDDFDGTFEIDSESGEIYTNARLDREETPAY 2752
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 14/167 (8%)
Query: 8 SALEMTSDSLFYGAMARDKHELGVT--LMQVKATDKDSGKFGLVE----YRLLDNNTDAA 61
S LE T + + A+A +LG+ + V + GKFG+ Y + +
Sbjct: 993 SLLESTPVNERFFALAASDTDLGLNGRISYVISEGNTEGKFGIFPDGFLYVRQSLDREDK 1052
Query: 62 SYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ--DGLA 119
Y++L G SS V I V D ND +PEF + + F++ E + D
Sbjct: 1053 DYYSLSVTASDLG----NPSRSSVVPVVIHVIDENDNSPEFTNASFSFNIRENEPPDSF- 1107
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
VG++ ATD D G+NA + +S+ FV+D G I+T D E+
Sbjct: 1108 VGKLTATDRDIGRNAELIFSLSNSQSDFVIDPKNGFIKTLHVFDREE 1154
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 70/166 (42%), Gaps = 27/166 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLL--DNNTD------------------AASYFNLDP 68
+ ++ V ATD DSG G + +R+ D N D +NL
Sbjct: 1953 IATPIVTVSATDLDSGDNGKIVFRITAGDENGDFEMTPNGTVITKKELDRERQGLYNLVV 2012
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATD 127
Q D+ LSST V I + D+ND +PEF + P E SV E V V A D
Sbjct: 2013 TATDQAKPPDQR-LSSTVQVTIILKDVNDMSPEFVT-PNETSVAENIAINTVVMAVKAID 2070
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
DEG+N + YS+ D F + G +R + +D E + Y
Sbjct: 2071 KDEGRNGYIEYSLSPDSASSGTFSLGPVDGLLRVSGRIDRETKSNY 2116
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 20/154 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRL----------LDNNTDAAS------YFNLDPATEHQGPI 76
+ QVKATD DS K +++Y + +D T + Y D T +
Sbjct: 3226 VFQVKATDIDSPKNAIIQYSISDGPDKDMFAIDQKTGRVTAKYSFDYEENDLYTINIVAS 3285
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAV 135
+ + A + + + +N+ P F + F V E + G VG V ATD D G +
Sbjct: 3286 NPDSPMFGIAELRVHINGVNEYYPRFIQPVFHFDVSESAEVGTQVGTVQATDQDAGDDGK 3345
Query: 136 VYY---SVPEDIPFVVDANTGDIRTNKALDYEKQ 166
VYY D F +++ +G I +++LD E Q
Sbjct: 3346 VYYLFVGSSNDRGFNINSESGVISVSRSLDRETQ 3379
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYY--- 138
++TA + I V D+ND P F+ Y + E G V + ATD D G NA +YY
Sbjct: 449 TATAFLIIHVNDVNDHEPVFEKSEYSAILSELAPSGTYVAGITATDEDSGVNAQIYYAFV 508
Query: 139 SVPEDIPFVVDANTGDIRTNKALDYEKQ 166
S E F ++++TG I T LD E Q
Sbjct: 509 SGNEHQWFSINSDTGLITTRDILDREVQ 536
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 76/184 (41%), Gaps = 26/184 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA--------- 69
Y A+ + G + + ATD+DSG + Y + N N D
Sbjct: 473 YSAILSELAPSGTYVAGITATDEDSGVNAQIYYAFVSGNEHQWFSINSDTGLITTRDILD 532
Query: 70 TEHQGPIQ------DEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQ-DGLAV 120
E QG ++ D G A ++VT D ND+ P F + S+ E G +
Sbjct: 533 REVQGTVELNISARDGGPNPKWAYTQLKVTILDENDEAPRFSQSKFNVSLSENAPPGTLI 592
Query: 121 GRVHATDADEGQNAVVYYSVPE------DIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
+ A+D D+G N V YS+ D V+D+ TG + T K LD E+ Y +
Sbjct: 593 AMLTASDHDQGTNGSVAYSLHPVTQQHYDNVLVLDSLTGQLTTRKKLDREEISHY--EIH 650
Query: 175 LISK 178
+I+K
Sbjct: 651 VIAK 654
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP---E 142
TV + VT N P F +L Y+ VPE + G + V+A+D D+G N ++ Y + E
Sbjct: 3087 TVTLVVTGENKYMPVFTALSYQVIVPENEPLGSTILTVNASDDDQGPNGMIRYKISGGNE 3146
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
F VD +G + + LDY+ Q Y
Sbjct: 3147 RKEFAVDPYSGAVTILQPLDYDTIQEY 3173
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 73/168 (43%), Gaps = 29/168 (17%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPI 76
E+G + V+ATD+D+G G V Y + ++ D FN++ + E Q I
Sbjct: 3325 EVGTQVGTVQATDQDAGDDGKVYYLFVGSSNDRG--FNINSESGVISVSRSLDRETQSRI 3382
Query: 77 ------QDEGGL----SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHA 125
++ GG+ + A V + V D ND PEF YE + EG G V V A
Sbjct: 3383 VLTIMAKNAGGIRGNDTDEAQVIVEVQDGNDP-PEFLQTLYEVEISEGAPVGSKVTAVKA 3441
Query: 126 TDAD-EGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D D QN YS+ + F +D +G I T + LD E Y
Sbjct: 3442 VDKDVRPQNNQFSYSIIGGNIEQAFKIDPQSGQIETARFLDRETTPEY 3489
Score = 38.9 bits (89), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV--PEDI 144
+ I+V D ND P F+ P +S+ E G +V V A D D V+ YS+ +D
Sbjct: 1720 IQIKVLDKNDSPPSFKDTPLYYSISEDLGPGQSVATVKADDPD--TIGVLEYSLIRGDDG 1777
Query: 145 PFVVDANTGDIRTNKALDYEKQQLY 169
FV+D NTG + +LD E + +Y
Sbjct: 1778 HFVLDKNTGVLTLVDSLDRETKDVY 1802
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 71/175 (40%), Gaps = 44/175 (25%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y A + L ++ ATDKD G + Y LL + D F +D QD
Sbjct: 2372 YHATINENSPLSTWVVTPTATDKDIGLNAKIRYSLLGDKVDR---FKID---------QD 2419
Query: 79 EGGLSSTATVN-----------------------------IRVTDINDKNPEFQSLPYEF 109
G ++++A ++ I VTD ND +P F S YE
Sbjct: 2420 AGIITTSAILDREETEIYYFTVMAQDCSATEPRAAAVNLTITVTDENDNSPSFSSTKYEV 2479
Query: 110 SVPEG-QDGLAVGRVHATDADEGQNAVVYYSVP-EDIP-FVVDANTGDIRTNKAL 161
++ + + G V A+D D G N+ + Y++ E P F ++ TG I+ + L
Sbjct: 2480 NISDKTKAGEFVFGARASDDDIGINSKISYALTGEHAPNFTINPETGVIKAAQDL 2534
Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 67/170 (39%), Gaps = 32/170 (18%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN-TDAASYFNLDPAT---EHQGPIQDE 79
R+ + ++ V A D D G G V Y + D+ +F ++P T PI E
Sbjct: 1419 REGISVHTPIVTVTADDPDYGINGKVTYAISQQEPEDSNRHFGINPVTGVIHTLLPIDRE 1478
Query: 80 -------------------GGLSSTATVNIRVTDINDKNPEFQS-----LPYEFSVPEGQ 115
LS+ V + V D+ND P F S LP P +
Sbjct: 1479 TIDTFRLTVVATDEAQPASARLSANKLVTVIVEDVNDNAPVFVSMNSAILPQNTQFP--K 1536
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDY 163
+G + V A D D N +V Y + P F +D ++G +R K +++
Sbjct: 1537 EGALIMNVFARDLDSATNGLVTYELASGSPDLFRLDQSSGALRLVKPIEH 1586
>gi|158259103|dbj|BAF85510.1| unnamed protein product [Homo sapiens]
Length = 798
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 19/171 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY + +G +++V ATD D+G G + Y L + + F ++P T
Sbjct: 247 FYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKK 306
Query: 71 ----------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
E +D G S TV I+V D+ND PE + +PE V
Sbjct: 307 QLDFEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVV 366
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDA--NTGDIRTNKALDYEKQQLY 169
+D D G+N + S+ ED+PF++ + N + T + LD E + Y
Sbjct: 367 ALFSVSDLDSGENGKISCSIQEDLPFLLKSAENFYTLLTERPLDRESRAEY 417
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
S TA V I V D+ND PEF+ Y + E G V +V ATD D G N + YS+
Sbjct: 224 SGTAQVYIEVLDVNDNAPEFEQPFYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLF 283
Query: 141 --PEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
E+I F ++ TG+I K LD+EK Q Y
Sbjct: 284 QASEEIGKTFKINPLTGEIELKKQLDFEKLQSY 316
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 81/202 (40%), Gaps = 49/202 (24%)
Query: 9 ALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL-------------D 55
A TS +LF R+ + + + V ATD+DSG V Y LL
Sbjct: 450 AFTQTSYTLF----VRENNSPALHIRSVSATDRDSGTNAQVTYSLLPPQDPHLPLTSLVS 505
Query: 56 NNTDAASYFNLDP--------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNP- 100
N D F L A++H P LSS A V + V D ND +P
Sbjct: 506 INADNGHLFALRSLDYEALQGFQFRVGASDHGSP-----ALSSEALVRVVVLDANDNSPF 560
Query: 101 -----EFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDAN 151
+ S P VP + G V +V A D D GQNA + Y + + F V A+
Sbjct: 561 VLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATELGLFGVWAH 620
Query: 152 TGDIRTNKAL---DYEKQQLYL 170
G++RT + L D K +L +
Sbjct: 621 NGEVRTARLLSERDAAKHRLVV 642
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L + + + + D+ND P F Y V E L + V ATD D G NA V YS+
Sbjct: 431 LITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVTYSL 490
Query: 141 --PED--IPFV----VDANTGDIRTNKALDYEKQQLYLERV 173
P+D +P ++A+ G + ++LDYE Q + RV
Sbjct: 491 LPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRV 531
>gi|195378480|ref|XP_002048012.1| GJ13735 [Drosophila virilis]
gi|194155170|gb|EDW70354.1| GJ13735 [Drosophila virilis]
Length = 4641
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 77/177 (43%), Gaps = 30/177 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD------------------- 59
Y ++ +L + +V ATDKD G ++Y L+ N+D
Sbjct: 3133 YRVSIQEDAQLQTLVTKVHATDKDFGINRKIKYSLIGTNSDYFEISKSTGIIKLEKNLDR 3192
Query: 60 -AASYFNLDPATEHQG-PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QD 116
S +NL E G PI +SS A + I + DIND PEF Y V E
Sbjct: 3193 ETISIYNLTLIAEDYGKPI-----MSSVANIVINILDINDNPPEFSLRQYSSHVHENVTQ 3247
Query: 117 GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
G V VHAT D G NA + Y + E F ++++TG + N LDYEK + Y
Sbjct: 3248 GFDVCTVHATSKDIGVNAEISYYIISGNEQRKFNINSSTGVLWVNGTLDYEKTKFYF 3304
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA---TEHQGPIQDEGGLS-- 83
+ + ++++K +D D GKF LV ++ N N D T+ Q + + +
Sbjct: 374 INMPVIRLKVSDPDMGKFALVYLEVVGGNEGGEFRINPDSGMLYTQKQLDAETKSSYTLT 433
Query: 84 --------------STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDA 128
S+A V I + D+ND +P F+++ + E + G V ++ A D
Sbjct: 434 VSAIDQADVGSRKQSSAKVKITIEDMNDNDPIFENMNKVIYINENELAGSFVTKLTAKDR 493
Query: 129 DEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQ 167
D G+NA + YS+ ++PF +D +G I+T +DYE +
Sbjct: 494 DSGENAYISYSIANLNEVPFEIDHFSGVIKTTNLIDYETMR 534
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV 140
LS+ A V I V D+ND P F Y F + E G V + A D D G+NA + +S+
Sbjct: 919 LSAEAVVYILVDDVNDNAPIFGVQEYMFKIREDVPRGTVVAVIEAIDKDMGENAEILFSL 978
Query: 141 PEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
ED F +D ++G IRT L+YE +Q++
Sbjct: 979 KEDTQDKNLFKIDKHSGAIRTEGYLNYENRQVH 1011
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 26/154 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------------EH--QG 74
++Q++A D D + Y + N YF+++P T EH +
Sbjct: 1171 IIQLRAIDPDIDPLQTITYSITSGN--HVGYFDIEPHTGLLKTTERKLDRENQSEHILEV 1228
Query: 75 PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
I D G L+ST V + V DIND +P F Y+ VP + ++ +VHA D D+G
Sbjct: 1229 SISDNGSPILTSTTRVVVSVLDINDNSPVFDQRVYKVQVPSTTNMNESIFQVHAIDNDDG 1288
Query: 132 QNAVVYYSV---PEDIPFVVDANTGDIRTNKALD 162
+N+ + YS+ + F +D+ +G I K L+
Sbjct: 1289 ENSRITYSIKSGKKKNKFRIDSFSGHIFFTKTLE 1322
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 73/166 (43%), Gaps = 29/166 (17%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL----- 82
+LG T+ ++A D+D G G + + + D + D S F +DP + G +Q G L
Sbjct: 745 QLGTTVAVIEARDRDLGYNGKLVFAIADGDYD--SVFRIDPDS---GELQIIGYLDRERL 799
Query: 83 -----------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVH 124
S + + I +TD ND P Q + E G V VH
Sbjct: 800 SEYILNITVYDLGHPTKSDSKILPITITDANDNPPVLQKSLATLRLTENAPKGSVVYCVH 859
Query: 125 ATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
ATDAD G NA + Y++ + F ++ TG I ++ LD E+ Y
Sbjct: 860 ATDADLGINAEITYTLAVEFKEFTINKTTGCIVLSEQLDREQTDKY 905
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 23/179 (12%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGK------------FGLVEYRL--LDNNTDAAS 62
L++ ++ + E V +MQ+ ATD+D K L +R+ + N
Sbjct: 1469 LYHVNISENIEEESV-IMQLHATDRDEDKKLFYQLHATQDPSSLTLFRIDSISGNVIVTQ 1527
Query: 63 YFNLDPATEHQ--GPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ + ++H ++D+G G A + + V D ND PEF + + VPE G
Sbjct: 1528 KLDFEKTSQHILIAFVKDQGTPGKRDYAKIIVNVHDHNDHYPEFTTKIIQSKVPESAAIG 1587
Query: 118 LAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ +V A D D G+NA + YS+ F +D+ G I +LD K Q Y+ +V
Sbjct: 1588 SKLVQVTAIDRDSGKNAELRYSIITGNVGSMFEIDSTFGIIYLAASLDINKMQEYMLQV 1646
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 61/154 (39%), Gaps = 27/154 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y A ++ + V ++ VKATD+DS G+++Y ++ ++ + N+ T D
Sbjct: 3342 YRASVKEDVNIDVPIIDVKATDEDSNLNGIIKYNIVKGDSLSQFSINISNGTISLARPLD 3401
Query: 79 EGGLSSTA-----------------TVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAV 120
+S A VN+ V D ND P F Y + E + G
Sbjct: 3402 RETISDYALEVQACDLGIPERCDSVLVNVAVLDANDNAPVFSQANYSVVLQENRPLGYVF 3461
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD 154
R TDADE P IP+ D +G+
Sbjct: 3462 IRFDVTDADEA---------PNSIPYTYDIRSGN 3486
Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 70/169 (41%), Gaps = 25/169 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGP 75
Y + + G + V AT KD G + Y ++ N FN++ +T G
Sbjct: 3237 YSSHVHENVTQGFDVCTVHATSKDIGVNAEISYYIISGNEQRK--FNINSSTGVLWVNGT 3294
Query: 76 IQDE-------------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
+ E GG LS+ A VNI + D+ND P F Y SV E + +
Sbjct: 3295 LDYEKTKFYFLTVQAIDGGSPPLSNIAYVNISIDDVNDNTPTFTQNNYRASVKEDVNIDV 3354
Query: 119 AVGRVHATDADEGQNAVVYYSVPED---IPFVVDANTGDIRTNKALDYE 164
+ V ATD D N ++ Y++ + F ++ + G I + LD E
Sbjct: 3355 PIIDVKATDEDSNLNGIIKYNIVKGDSLSQFSINISNGTISLARPLDRE 3403
Score = 42.4 bits (98), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDI-P 145
++++V D ND +P F Y +VPE ++ +V A DAD G N +YYS D
Sbjct: 128 IHVQVLDRNDLSPLFYPTEYAVTVPEDTPKHHSILKVIADDADLGINGEIYYSFLIDSES 187
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F + TGDI + L+Y + Y
Sbjct: 188 FAIHPTTGDITILRQLNYAENSHY 211
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE 142
+ +V I V DIND P F ++PY SV G G + +V A D D +N V Y + +
Sbjct: 2077 AITSVYISVQDINDNCPMFVNMPYYASVSVGFTKGTIIMKVKAIDLDSAENGEVRYELKK 2136
Query: 143 DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
F +D TG++ ++++ ++ L
Sbjct: 2137 GNGELFKIDRKTGELSIKQSIEGHNRKYEL 2166
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 77/178 (43%), Gaps = 25/178 (14%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---- 70
D+ Y A + + +++++ ATD+D+G G V Y D + + F++D T
Sbjct: 2818 DNTIYNADVAENTDKVASILKITATDEDTGSNGDVRYYFDDESNGIRNVFDIDIYTGWIT 2877
Query: 71 ---EHQGPIQDEGGLSSTAT------------VNIRVTDINDKNPEFQSLPYE-FSVPEG 114
+Q E L AT V+I++ D ND P+F+ LP + S+ E
Sbjct: 2878 LLSSLDREVQSEFNLKVIATDNGHPKHDSKVPVSIKIIDYNDNGPQFK-LPNDTISISEN 2936
Query: 115 Q-DGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLY 169
G + + D D + + YY + D F + TG++ ++ LD E+ Y
Sbjct: 2937 ALPGTVLKNLLLIDPDSEKQTMEYYIISGDSQSQFQI-GKTGELFISRPLDREQTAFY 2993
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS 139
G+ + ++I + D+ND PE ++ Y ++PE G + +++ATD D G N + Y
Sbjct: 2277 GIYADVLLSISIIDVNDCYPEIENDNYNITLPENIPFGSQILKINATDRDSGANGKLSYF 2336
Query: 140 VPEDI-------PFVVDANTGDIRTNKALDYE 164
+ E I F +D + G + +LDYE
Sbjct: 2337 I-ESIDGRNDSDTFYIDVSEGYLYLKTSLDYE 2367
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L + A V I VTD ND P+F + Y V E D +A + ++ ATD D G N V Y
Sbjct: 2797 LYAYADVYIHVTDENDNYPKFDNTIYNADVAENTDKVASILKITATDEDTGSNGDVRYYF 2856
Query: 141 PEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERVF 174
++ F +D TG I +LD E Q + +V
Sbjct: 2857 DDESNGIRNVFDIDIYTGWITLLSSLDREVQSEFNLKVI 2895
Score = 39.3 bits (90), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPED----I 144
I+V D ND P+F Y ++ E ++ + ++HATD DE + +D
Sbjct: 1453 IQVVDTNDNAPQFTKELYHVNISENIEEESVIMQLHATDRDEDKKLFYQLHATQDPSSLT 1512
Query: 145 PFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
F +D+ +G++ + LD+EK ++ F+
Sbjct: 1513 LFRIDSISGNVIVTQKLDFEKTSQHILIAFV 1543
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 16/145 (11%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDA-ASY 63
+ + Y A + G ++ VKA D D G++ V Y + ++ NT + S
Sbjct: 2509 EEIVYKASILENMPHGHEIITVKAIDNDFGQYASVYYEIASEEMKKYFEINRNTGSITSK 2568
Query: 64 FNLDPATEHQGPIQ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGL 118
D + + +Q D G AT+ + + D+ND +P+F Y+ + +
Sbjct: 2569 VAFDRELKDEYVLQLKAIDGGSKFGFATLRVSIKDVNDNSPQFFVKEYKIVISSSIKPND 2628
Query: 119 AVGRVHATDADEGQNAVVYYSVPED 143
V V A D D +N V YS+ D
Sbjct: 2629 TVLTVRAMDKDIHENGAVKYSIVPD 2653
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 14/101 (13%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAV------GRVHAT----DADEG 131
SS + + V D ND P+F Y V E G V + H T DAD G
Sbjct: 1755 SSRQNLIVHVLDANDNVPKFLQSEYIGRVSEAASLGSYVQIIDDKKKRHLTLNVFDADVG 1814
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
N ++ +++ +D+ F +D+ TG I ++LDYEK+ Y
Sbjct: 1815 LNGMLQFNILDDLAKNMFKIDSTTGAIEILRSLDYEKKTNY 1855
>gi|195159445|ref|XP_002020589.1| GL15349 [Drosophila persimilis]
gi|194117539|gb|EDW39582.1| GL15349 [Drosophila persimilis]
Length = 1812
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 82/176 (46%), Gaps = 24/176 (13%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y A + + G +++QV A D+D G ++ Y L + A +F +DP T
Sbjct: 497 LYHANVMEVADPGTSVLQVLAHDRDEGLNSVLSYALAETPETHAQWFQIDPQTGLITTRS 556
Query: 71 ---------EHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
I +GG LSSTATV + + D+ND P F Y SV E + G
Sbjct: 557 HIDCETEPVPQLTVIARDGGQPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVG 616
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
+ +V A+D D G NA+V Y++ E F V + +G+I LD+E++ Y
Sbjct: 617 RCILKVSASDPDCGVNAMVNYTLGEGFKHLTEFEVRSASGEICIAGELDFERRSSY 672
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 83/185 (44%), Gaps = 34/185 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-------------NNTDAASYFN 65
Y + + ++QV ATD D+G + YR++D ++D A +F
Sbjct: 1028 YAVNVSESRPVNSQIVQVNATDLDTGNNARITYRIVDAGADNATAPAAAGGSSDVALHFG 1087
Query: 66 LDPATEH---QGPI----QDEGGLSSTATVN------------IRVTDINDKNPEFQSLP 106
+ P + + P+ +D L AT N +RV D ND +P F
Sbjct: 1088 IFPNSGWIYLRAPLDRETRDRYQLVILATDNGTPAAHARTRVLVRVLDANDNDPRFLRPQ 1147
Query: 107 YEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYS-VPEDIPFVVDANTGDIRTNKALDYE 164
YEF + E + G VG V A D D G+NA + YS +P + F V TG+I T + LD E
Sbjct: 1148 YEFRIEENLRRGSVVGAVAARDLDLGENAAIRYSLLPANSSFQVHPVTGEISTREPLDRE 1207
Query: 165 KQQLY 169
+ LY
Sbjct: 1208 LRALY 1212
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 77/168 (45%), Gaps = 33/168 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI---------- 76
G + V A D D G+ + Y LL N S F + P T + P+
Sbjct: 1159 GSVVGAVAARDLDLGENAAIRYSLLPAN----SSFQVHPVTGEISTREPLDRELRALYDL 1214
Query: 77 ----QDEGGLSSTATVNIRV--TDINDKNPEFQSLPYE--FSVPEGQD-GLAVGRVHATD 127
+D+G +A V +RV +D+ND PE P E SV E Q G V R+ ATD
Sbjct: 1215 VVEARDQGTPVRSARVPVRVHVSDVNDNAPEIAD-PQEDVVSVREEQPPGTEVVRIRATD 1273
Query: 128 ADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
D GQNA + YS+ + F +D TG IRT LD+E++ +Y
Sbjct: 1274 RDHGQNASITYSIVKGRDSDGHGLFSIDPATGVIRTRVLLDHEERSIY 1321
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L TVNI + D+ND P F Y +VPE G +V +V+A+D D +N +V Y++
Sbjct: 255 LRGLMTVNITIQDVNDNQPIFNQSRYFATVPENATVGTSVLQVYASDTDAEENGLVEYAI 314
Query: 141 -----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ F +D TG I NKALD+E ++L+
Sbjct: 315 NRRQSDKEQMFRIDPQTGAIFINKALDFETKELH 348
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 22/160 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------EHQGPIQDEG 80
G + V AT D+ V Y + + D YF ++ + +H+ Q
Sbjct: 832 GTVVGSVIATSGDTAHRSPVRYSIYSGDPDG--YFGIEGGSGNIRIARPLDHEAKGQVLL 889
Query: 81 GLSSTA---------TVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
+ +TA VNI V D+ND PEF++ SVPE D G + HA D D
Sbjct: 890 NIQATAGEPPVYGHTQVNIEVEDVNDNAPEFEASLVRISVPENADLGAPLYAAHAHDKDS 949
Query: 131 GQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + V YS+ E F +D +G + ++ LDYE Q +
Sbjct: 950 GSSGQVTYSLARERQLFAIDPRSGHLVLSQHLDYETSQRH 989
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 25/166 (15%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY--------------RLLDNNTDA 60
D FY + +G +++V A+D D G +V Y R
Sbjct: 601 DQSFYNVSVAENEPVGRCILKVSASDPDCGVNAMVNYTLGEGFKHLTEFEVRSASGEICI 660
Query: 61 ASYFNLDPATEHQGPI--QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG---- 114
A + + + ++ P+ D GGLS+TA + +++TD+ND P F Y S+ E
Sbjct: 661 AGELDFERRSSYEFPVLATDRGGLSTTAMIKMQLTDVNDNRPVFYPREYNVSLKESPPAQ 720
Query: 115 --QDGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
+ V V ATD D G V Y + E F +D ++G+I
Sbjct: 721 TPAASIPVVAVVATDPDSGSFGQVSYRIVAGNEAGIFRIDRSSGEI 766
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L ++ ++ +R+TD+ND PEF+ Y +V E D G +V +V A D DEG N+V+ Y++
Sbjct: 473 LHASKSIFLRITDVNDNPPEFEQELYHANVMEVADPGTSVLQVLAHDRDEGLNSVLSYAL 532
Query: 141 PEDIP-----FVVDANTGDIRTNKALDYEKQ 166
E F +D TG I T +D E +
Sbjct: 533 AETPETHAQWFQIDPQTGLITTRSHIDCETE 563
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 58/149 (38%), Gaps = 25/149 (16%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLD----PATEHQGPIQDEGGLSSTATVNIRVT 93
A D D LV RLLD + S F L+ T P SS TV I V
Sbjct: 1420 AFDIDRHTGSLVVARLLDR--EVQSEFRLEIRALDTTASNNP------QSSAVTVKIEVA 1471
Query: 94 DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------- 145
D+ND P + P E + E G V ATDAD G N + Y + P
Sbjct: 1472 DVNDNAPHWPRDPVELRLSEATAVGAVVHNFTATDADTGTNGELQYRLLRYFPLLNETQE 1531
Query: 146 -----FVVDANTGDIRTNKALDYEKQQLY 169
F VD+ TG + LD+E Q Y
Sbjct: 1532 QATPVFAVDSLTGSLSLQAPLDFEAVQEY 1560
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 19/101 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------- 71
Y A + +G +++QV A+D D+ + GLVEY + +D F +DP T
Sbjct: 280 YFATVPENATVGTSVLQVYASDTDAEENGLVEYAINRRQSDKEQMFRIDPQTGAIFINKA 339
Query: 72 --------HQGPI----QDEGGLSSTATVNIRVTDINDKNP 100
H+ + E L +TA V+IRVTD+ND P
Sbjct: 340 LDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQP 380
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 24/133 (18%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD--------- 78
+LG L A DKDSG G V Y L F +DP + H Q
Sbjct: 934 DLGAPLYAAHAHDKDSGSSGQVTYSLARER----QLFAIDPRSGHLVLSQHLDYETSQRH 989
Query: 79 -------EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+GG L++ T+ + V D+ND P F+ Y +V E + + +V+ATD
Sbjct: 990 TLVVTATDGGVPPLATNLTILVDVQDVNDNPPVFERDEYAVNVSESRPVNSQIVQVNATD 1049
Query: 128 ADEGQNAVVYYSV 140
D G NA + Y +
Sbjct: 1050 LDTGNNARITYRI 1062
Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 21/121 (17%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT---------EHQ 73
R++ G +++++ATD+D G+ + Y ++ ++D F++DPAT +H+
Sbjct: 1257 REEQPPGTEVVRIRATDRDHGQNASITYSIVKGRDSDGHGLFSIDPATGVIRTRVLLDHE 1316
Query: 74 -------GPIQDEGGLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGR 122
G +GG T + + V D+ND P F S F V E G VG
Sbjct: 1317 ERSIYRLGVAATDGGQPPKETLRMLRVEVLDLNDNRPTFTSSSLVFRVREDAHVGHVVGS 1376
Query: 123 V 123
+
Sbjct: 1377 I 1377
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 65/171 (38%), Gaps = 38/171 (22%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLL-------DNNTDAASYFNLDPAT---EHQGPIQD 78
+G + ATD D+G G ++YRLL + A F +D T Q P+
Sbjct: 1495 VGAVVHNFTATDADTGTNGELQYRLLRYFPLLNETQEQATPVFAVDSLTGSLSLQAPLDF 1554
Query: 79 EG-------------------GLSSTATVNIRVTDINDKNPEFQSLPYE------FSVPE 113
E L ++ TV +RV D ND PEF S + F
Sbjct: 1555 EAVQEYTLIVQALDQSSNASERLQTSVTVRLRVLDANDNAPEFVSPLAKGGSASVFLSDA 1614
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKAL 161
+ G V V A D D G N + Y + + F + A TG I K+L
Sbjct: 1615 TRIGETVAHVVALDRDAGDNGRLAYDIEGGNGEGRFRISAATGVIELVKSL 1665
>gi|11036654|ref|NP_061756.1| protocadherin beta-13 precursor [Homo sapiens]
gi|13431381|sp|Q9Y5F0.1|PCDBD_HUMAN RecName: Full=Protocadherin beta-13; Short=PCDH-beta-13; Flags:
Precursor
gi|5457033|gb|AAD43753.1|AF152492_1 protocadherin beta 13 [Homo sapiens]
gi|14009455|gb|AAK51613.1|AF217745_1 protocadherin-beta13 [Homo sapiens]
gi|21620005|gb|AAH33068.1| Protocadherin beta 13 [Homo sapiens]
gi|30411001|gb|AAH51348.1| Protocadherin beta 13 [Homo sapiens]
gi|37181979|gb|AAQ88793.1| PCDHB13 [Homo sapiens]
gi|47939613|gb|AAH71934.1| Protocadherin beta 13 [Homo sapiens]
gi|119582374|gb|EAW61970.1| protocadherin beta 13 [Homo sapiens]
Length = 798
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 19/171 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY + +G +++V ATD D+G G + Y L + + F ++P T
Sbjct: 247 FYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKK 306
Query: 71 ----------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
E +D G S TV I+V D+ND PE + +PE V
Sbjct: 307 QLDFEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVV 366
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDA--NTGDIRTNKALDYEKQQLY 169
+D D G+N + S+ ED+PF++ + N + T + LD E + Y
Sbjct: 367 ALFSVSDLDSGENGKISCSIQEDLPFLLKSAENFYTLLTERPLDRESRAEY 417
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
S TA V I V D+ND PEF+ Y + E G V +V ATD D G N + YS+
Sbjct: 224 SGTAQVYIEVLDVNDNAPEFEQPFYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLF 283
Query: 141 --PEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
E+I F ++ TG+I K LD+EK Q Y
Sbjct: 284 QASEEIGKTFKINPLTGEIELKKQLDFEKLQSY 316
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 81/202 (40%), Gaps = 49/202 (24%)
Query: 9 ALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL-------------D 55
A TS +LF R+ + + + V ATD+DSG V Y LL
Sbjct: 450 AFTQTSYTLF----VRENNSPALHIRSVSATDRDSGTNAQVTYSLLPPQDPHLPLTSLVS 505
Query: 56 NNTDAASYFNLDP--------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNP- 100
N D F L A++H P LSS A V + V D ND +P
Sbjct: 506 INADNGHLFALRSLDYEALQGFQFRVGASDHGSP-----ALSSEALVRVVVLDANDNSPF 560
Query: 101 -----EFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDAN 151
+ S P VP + G V +V A D D GQNA + Y + + F V A+
Sbjct: 561 VLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATELGLFGVWAH 620
Query: 152 TGDIRTNKAL---DYEKQQLYL 170
G++RT + L D K +L +
Sbjct: 621 NGEVRTARLLSERDAAKHRLVV 642
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L + + + + D+ND P F Y V E L + V ATD D G NA V YS+
Sbjct: 431 LITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRDSGTNAQVTYSL 490
Query: 141 --PED--IPFV----VDANTGDIRTNKALDYEKQQLYLERV 173
P+D +P ++A+ G + ++LDYE Q + RV
Sbjct: 491 LPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRV 531
>gi|348583018|ref|XP_003477272.1| PREDICTED: protocadherin beta-3-like [Cavia porcellus]
Length = 797
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 72/172 (41%), Gaps = 20/172 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y + + ++ V A+D D+G FG V Y + + F L+P T
Sbjct: 246 LYEVQILEDRTINSVILTVSASDLDTGTFGAVSYSFFHASEEVLKTFLLNPITGDILLIK 305
Query: 71 ----------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
E +D GGLS +TV ++V D+ND PE +PE V
Sbjct: 306 YLNFEAINTYEVDIEAKDGGGLSGKSTVIVQVLDVNDNAPELTLSSVNSPIPENSGETVV 365
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
+D D G+N + SVP ++PF++ + + + TN ALD E Y
Sbjct: 366 AVFSVSDPDSGENGKMKCSVPNNLPFLLKPSVENFYTLVTNTALDRETTAEY 417
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L + T+ + V+D+ND P F Y SVPE L +G V ATD+D G NA + YS+
Sbjct: 431 LKTQHTITVLVSDVNDNAPTFTQSSYTLSVPENNSPALHIGSVSATDSDSGTNAQLTYSL 490
Query: 141 PEDIP---------FVVDANTGDIRTNKALDYEKQQLYLERV 173
++A+TG + +ALDYE + + RV
Sbjct: 491 LPPPHDPLPGLASLVSINADTGQLFALRALDYEALRAFEFRV 532
Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS-- 139
S TA + I V DIND PEF+ YE + E + + V A+D D G V YS
Sbjct: 223 SGTAQIQILVLDINDNAPEFKQSLYEVQILEDRTINSVILTVSASDLDTGTFGAVSYSFF 282
Query: 140 -VPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
E++ F+++ TGDI K L++E Y
Sbjct: 283 HASEEVLKTFLLNPITGDILLIKYLNFEAINTY 315
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 70/171 (40%), Gaps = 36/171 (21%)
Query: 36 VKATDKDSGKFGLVEYR--------------LLDNNTDAASYFNLDP-------ATEHQG 74
V ATD DSG + Y L+ N D F L A E +
Sbjct: 473 VSATDSDSGTNAQLTYSLLPPPHDPLPGLASLVSINADTGQLFALRALDYEALRAFEFRV 532
Query: 75 PIQDEGG--LSSTATVNIRVTDINDKNP------EFQSLPYEFSVPEG-QDGLAVGRVHA 125
D G LS A V +RV D ND P + S P +P Q G + +V A
Sbjct: 533 RATDRGAPPLSGQARVRVRVLDANDNAPFVLHPLQNASAPCTELLPRAAQPGYLLTKVVA 592
Query: 126 TDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKA---LDYEKQQLYL 170
DAD GQNA + + + E F V A++G++RT + D +Q+L +
Sbjct: 593 VDADAGQNAWLSFQLLQASEPGLFSVWAHSGEVRTARPPGERDAPRQRLLV 643
>gi|443704241|gb|ELU01386.1| hypothetical protein CAPTEDRAFT_181060 [Capitella teleta]
Length = 2711
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 80/153 (52%), Gaps = 19/153 (12%)
Query: 35 QVKATDKDSGKFGLVEYRLLD-NNTDAASYF----------NLDPATEHQGPIQ----DE 79
+V+A+D DSG G + Y++ + N D F LD H+ D
Sbjct: 420 EVQASDADSGNNGKIRYQVQNGQNVDVFGVFADDGFLYNRVKLDRERRHEYSFVVLAVDN 479
Query: 80 G--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVV 136
G SS+A+V +RV D ND +P FQ++PY F + E Q VG V ATD DE N ++
Sbjct: 480 GVPSRSSSASVTVRVLDANDNDPIFQNIPYVFQITENQPPHTLVGVVSATDKDE-TNQLI 538
Query: 137 YYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y+ + F V+A +G++ +++ LD E++ L+
Sbjct: 539 YFLESSNQYFSVNAESGEVLSSQQLDREERDLH 571
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 72/166 (43%), Gaps = 21/166 (12%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN-----TDAASYFNLDPATEHQGPIQD 78
++ LG T+ V A D DSG G V Y + D N + +L +H+ ++
Sbjct: 306 KEDMRLGSTIYVVHAFDADSGDNGRVRYSIQDPNDIFEVNSESGEISLKRRLDHEMTVRH 365
Query: 79 E----------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG-LAVGRVHATD 127
E G ++ TV + V DIND P F+ Y F V E + G V A+D
Sbjct: 366 EFMVHAYDLGPGDNQASMTVIVEVQDINDNAPVFEFSSYVFDVSESRKANFKFGEVQASD 425
Query: 128 ADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
AD G N + Y V D+ F V A+ G + LD E++ Y
Sbjct: 426 ADSGNNGKIRYQVQNGQNVDV-FGVFADDGFLYNRVKLDRERRHEY 470
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV--PE 142
A VNI + DIND PEF E V E G + VHA DAD G N V YS+ P
Sbjct: 280 AQVNITIDDINDNTPEFAVTTVEIPVKEDMRLGSTIYVVHAFDADSGDNGRVRYSIQDPN 339
Query: 143 DIPFVVDANTGDIRTNKALDYE 164
DI F V++ +G+I + LD+E
Sbjct: 340 DI-FEVNSESGEISLKRRLDHE 360
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 78/164 (47%), Gaps = 26/164 (15%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------AASYFNLDPATEHQ 73
+M D + ++ VKATD DSG++G V Y ++ N D +L T+
Sbjct: 97 SMDLDTVAISNQVVVVKATDTDSGEYGTVMYDIVGGNEDELFEINRGTGMISLTRTTDLS 156
Query: 74 GPIQ-------DEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQDGLA-VGRV 123
+ D GG+SS N+ V+ D + PEF S Y F+V E L VG V
Sbjct: 157 PSLHTLIVSATDGGGISSNVRANVSVSLRDASLNPPEFTSSLYRFNVDEDAGILTLVGVV 216
Query: 124 HATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
AT G+N V Y++ P F ++ NTG IR+ ++LD++
Sbjct: 217 EAT----GRN--VIYTILSGDPQGLFHLNPNTGQIRSEQSLDHD 254
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Query: 74 GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVG----RVHATDAD 129
G + E L+STA V I + DIND P F S Y VPE +A+ +V A D D
Sbjct: 1942 GSDRGEPPLNSTAPVTITILDINDNTPVFNSSVYHAQVPE---DIAIDEDIVKVSAYDLD 1998
Query: 130 EGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G N +++++ +D FV+D +TG I LD+E + ++
Sbjct: 1999 AGDNGRLHFNIDSGNDDNKFVIDRDTGVISVRITLDHESRDMH 2041
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 75/164 (45%), Gaps = 28/164 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLL----DNNTDAASYFNLDPAT---------EHQGPIQ-- 77
+ Q+ A D D G+ + Y D N D A FNLD + +H+ +Q
Sbjct: 625 VAQITARDSDKGENASITYGFYEGGPDTNHDTA-MFNLDTSNGRITTKEVLDHESKVQYV 683
Query: 78 -----DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+GG + TV + V D N+ P+F S FS+ E G VG V A D+
Sbjct: 684 FKLLARDGGSPHRQTLKTVEVIVEDQNESPPQFDSAHTYFSILENTAPGTIVGNVTAKDS 743
Query: 129 DEGQNA-VVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
D G+NA V YY V ++ F V + TG I ++ +D+E+ Y
Sbjct: 744 DSGENARVTYYIVRGNLFGTFGVHSTTGAIFVSRPVDFEECSRY 787
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 26/170 (15%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRLL------------------DNNTDAASYFN 65
++ +G + A D+DSG FG+ +Y ++ D +T A Y+N
Sbjct: 2086 QENQRIGSHVFTAHANDRDSGIFGITQYFIVRDKDQSAKENFVINTHTGDVSTAAVFYYN 2145
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVH 124
+ + D GGL + T + + K P F ++ Y+F VP + G VG++
Sbjct: 2146 VSRRYSVRVRAVDSGGLYADTTYVVLIQPFTYKRPSFANVNYDFVVPGNAKKGFVVGQIR 2205
Query: 125 ATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLER 172
A D+ +VYYS P + F +++ +G I + L +Q+ + R
Sbjct: 2206 AMDS----GVMVYYSFKNPNEY-FAINSTSGVITVTQDLIENRQENEIMR 2250
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 12/111 (10%)
Query: 76 IQDEGGLSSTATVNIR--VTDINDKNPEF-QSLPYEFSVPEGQDG-LAVGRVHATDADEG 131
+ D+G S T++V+++ VTD+ND NP F + + + E Q V ++ A D+D+G
Sbjct: 577 VSDQGQPSRTSSVDVKIHVTDVNDNNPRFDKEGVFVAYINENQPADTLVAQITARDSDKG 636
Query: 132 QNAVVYYSVPEDIP--------FVVDANTGDIRTNKALDYEKQQLYLERVF 174
+NA + Y E P F +D + G I T + LD+E + Y+ ++
Sbjct: 637 ENASITYGFYEGGPDTNHDTAMFNLDTSNGRITTKEVLDHESKVQYVFKLL 687
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 28/180 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y + + + G + QV ATD D+G+ G V Y + NT A F +DP
Sbjct: 1560 YTSSTYEGNSRGTYVAQVIATDLDTGENGRVTYSITSGNTHNA--FVIDPPETGIVKTNI 1617
Query: 69 ------ATEHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
+ ++ I+ +GG LS+ T+ +++ D+ND +P F + P ++ EG + G
Sbjct: 1618 ILDREIVSTYRLEIEAIDGGRNPLSAICTLKVQIIDVNDNSPFFPAYP-PVNIHEGIEKG 1676
Query: 118 LAVGRVHATDAD---EGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
+ V A D D E Q P D F +D +G I K LD+E +Y R+
Sbjct: 1677 SFILEVTANDRDLTPELQYMFASDGNPAD-AFSIDRYSGKITVAKELDHEVMPVYRLRIL 1735
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 71/161 (44%), Gaps = 19/161 (11%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTD------------AASYFNLDPATEHQGPIQDEG 80
+ V A+D D G G + Y ++ NTD + N + ++ H I+ +
Sbjct: 1158 IHTVVASDADYGVNGHLTYSIIGGNTDNKFTLNSTTGQLSCRPLNREQSSLHNLTIEAKD 1217
Query: 81 G----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAV 135
G +S +++ I V D ND +PEF Y V E G +V RV A DAD G NA
Sbjct: 1218 GGNPARTSVSSILISVIDDNDNDPEFLLDGYTAEVFENIAVGTSVLRVQAVDADVGVNAE 1277
Query: 136 VYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVF 174
+ YS+ F ++ TG + T D EK Y V+
Sbjct: 1278 ISYSINNAAQGQFSINNITGVLSTAGEFDREKIAHYSFEVY 1318
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV 140
+SS VN+ + D+ND +P F+ P ++ E G+ + A D D G V + +
Sbjct: 802 MSSIINVNVSIIDVNDNSPYFEDNPVVITIRENIPAGVHIYTFTALDRDSGDYGRVQFEM 861
Query: 141 ----PEDIPFVVDANTGDIRTNKALDYEKQQ 167
P++ F V+ N+G ++ N+ +D+E+ +
Sbjct: 862 VSQSPQNDWFTVERNSGHLKINRQIDFEETK 892
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE--- 142
TV + + D ND P+F Y S EG G V +V ATD D G+N V YS+
Sbjct: 1540 TVWVNLKDSNDNAPKFTQQRYTSSTYEGNSRGTYVAQVIATDLDTGENGRVTYSITSGNT 1599
Query: 143 DIPFVVD-ANTGDIRTNKALDYEKQQLY 169
FV+D TG ++TN LD E Y
Sbjct: 1600 HNAFVIDPPETGIVKTNIILDREIVSTY 1627
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 25/165 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQDEG----- 80
+G +M + ATD DS G V + ++ N S+F+LD +T + P+ E
Sbjct: 945 VGYPVMHIVATDADSQDGGRVSFDIVSGNDH--SHFSLDSSTGLLQIAKPLDREAVAQYL 1002
Query: 81 --------GLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDA- 128
GL T + + V D+ND P FQ Y+ ++ E V
Sbjct: 1003 LNISAYDHGLPRRTTYMKLTVGVIDVNDSPPVFQHSVYKANISESAVVDTVVTTVHATDR 1062
Query: 129 DEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLYL 170
D NA + Y +P+ + F ++ +TG IR+ D E+Q Y+
Sbjct: 1063 DTDTNAELNYFIPDGVISNQFTIEQSTGVIRSRIGFDREQQSSYV 1107
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 26/172 (15%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH-----QGPIQD 78
R+ GV + A D+DSG +G V++ ++ + + +F ++ + H Q ++
Sbjct: 832 RENIPAGVHIYTFTALDRDSGDYGRVQFEMV-SQSPQNDWFTVERNSGHLKINRQIDFEE 890
Query: 79 -----------------EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVG 121
G L++T + I + D+ND +P FQ+ + + + G V
Sbjct: 891 TKQISIVVKAEDLAKNVSGRLATTVSALIIIEDVNDNSPLFQTRNQVYVLEDEPVGYPVM 950
Query: 122 RVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ ATDAD V + + + F +D++TG ++ K LD E YL
Sbjct: 951 HIVATDADSQDGGRVSFDIVSGNDHSHFSLDSSTGLLQIAKPLDREAVAQYL 1002
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 65/155 (41%), Gaps = 27/155 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDN-NTDAASYFNLDPAT---------------EHQGPI 76
+ QV A+D D G V Y + N S F + T + PI
Sbjct: 2 IFQVSASDPDCGANAQVRYAVAANLGFQYPSEFEVQAETGQICIIREVDYEKKHTYDFPI 61
Query: 77 --QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR----VHATDADE 130
+D+ L +TA V I V D+ND +P F P ++SV D +A+ V ATD D
Sbjct: 62 VARDQDNLDTTALVMIVVQDVNDNSPVF--YPTQYSVSMDLDTVAISNQVVVVKATDTDS 119
Query: 131 GQNAVVYYSV---PEDIPFVVDANTGDIRTNKALD 162
G+ V Y + ED F ++ TG I + D
Sbjct: 120 GEYGTVMYDIVGGNEDELFEINRGTGMISLTRTTD 154
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVP 141
++TA V + + D ND P F Y+ S+PE + V V+ATD+D NA + YS+
Sbjct: 1742 NATAEVLVNLIDDNDNPPVFGQQSYQVSIPELTPPDVQVLTVNATDSDSDDNARLTYSMI 1801
Query: 142 EDIPFVVDANTGDIRTNKALDYEKQQ 167
F +D+ TG I TN + + +Q
Sbjct: 1802 AVDGFKIDSITGVIYTNHTVMFNPRQ 1827
Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 64/164 (39%), Gaps = 23/164 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y A + +G ++++V+A D D G + Y + + S N+ G
Sbjct: 1248 YTAEVFENIAVGTSVLRVQAVDADVGVNAEISYSINNAAQGQFSINNITGVLSTAGEFDR 1307
Query: 79 E-------------GGL----SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD---GL 118
E GGL S + V + V DIND P F PY + QD
Sbjct: 1308 EKIAHYSFEVYATDGGLYGPRSESVRVEVTVKDINDNFPVFTQYPYRQEI--SQDLGVNQ 1365
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKAL 161
V +V ATD D N + YS F +D+ TG ++T L
Sbjct: 1366 RVLQVSATDTDADDNGRIRYSFSTASQFFKIDSTTGVVKTRSLL 1409
Score = 39.3 bits (90), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV 140
L TATV + V D ND P FQ VPE + V A+DAD G N + YS+
Sbjct: 1119 ALYDTATVLVDVLDENDNAPIFQVPLVSLEVPENAHLSVIHTVVASDADYGVNGHLTYSI 1178
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +++ TG + + L+ E+ L+
Sbjct: 1179 IGGNTDNKFTLNSTTGQLSC-RPLNREQSSLH 1209
Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----EHQ---GPIQDEGGL 82
V ++ V ATD DS + Y ++ A F +D T H P Q + L
Sbjct: 1778 VQVLTVNATDSDSDDNARLTYSMI-----AVDGFKIDSITGVIYTNHTVMFNPRQRDMHL 1832
Query: 83 ------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDAD 129
S+ A V ++V D+N+ P+F Y SV E + G + + ATD D
Sbjct: 1833 VVTAVDHGKPQRSAVAAVRVQVMDVNNHAPKFLPSTYSTSVAEDTKAGSTLLTLTATDDD 1892
Query: 130 EGQ-NAVVYYS-VPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+ N V+YYS V D+ F V +TG+I LD E++ Y
Sbjct: 1893 DLHVNKVIYYSIVSGDVESVFQVMGSTGEIVLVGVLDRERRSKY 1936
Score = 36.6 bits (83), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
S+ ATV + VTD+N+ P F ++ E Q G V HA D D G + Y +
Sbjct: 2057 SAFATVFVNVTDVNEFPPIFPEGLSFVNLQENQRIGSHVFTAHANDRDSGIFGITQYFIV 2116
Query: 142 EDIP------FVVDANTGDIRTNKALDYEKQQLYLERV 173
D FV++ +TGD+ T Y + Y RV
Sbjct: 2117 RDKDQSAKENFVINTHTGDVSTAAVFYYNVSRRYSVRV 2154
>gi|363746580|ref|XP_425190.3| PREDICTED: protocadherin gamma-A7-like, partial [Gallus gallus]
Length = 405
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 72/153 (47%), Gaps = 29/153 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------E 71
+G TL++V ATD D G G V+Y + + A++ F+L+P T E
Sbjct: 258 VGSTLLRVTATDLDDGTSGDVQYTFPEISDKASNIFHLEPITGAIKLVMNLDFEEADFYE 317
Query: 72 HQGPIQDEGGLSSTATVNIRVTDINDKNPEF--QSLPYEFSVPEGQDGLAVGRVHATDAD 129
+D GGLS TA V+I VTD+ND PE +S E S + G V +H D D
Sbjct: 318 LGVQARDGGGLSDTAKVSISVTDVNDNAPEISVRSALSEIS-EDAAPGTVVALLHVQDRD 376
Query: 130 EGQNAVVYYSVPEDIPFVVDANTGDIRTNKALD 162
G N V S+ E +PF R +ALD
Sbjct: 377 SGANGEVRCSLGEGVPF---------RLERALD 400
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 60/143 (41%), Gaps = 27/143 (18%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRV 92
L+ KA D++ F + LL +D DPA + TA + + V
Sbjct: 195 LVLAKALDREEAAF----HELLLRASDGG-----DPAR------------TGTARIRVAV 233
Query: 93 TDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE-----DIPF 146
D ND P F Y VPE G + RV ATD D+G + V Y+ PE F
Sbjct: 234 LDANDNAPAFSQAVYTVRVPEDVPVGSTLLRVTATDLDDGTSGDVQYTFPEISDKASNIF 293
Query: 147 VVDANTGDIRTNKALDYEKQQLY 169
++ TG I+ LD+E+ Y
Sbjct: 294 HLEPITGAIKLVMNLDFEEADFY 316
>gi|73945807|ref|XP_541068.2| PREDICTED: cadherin-19 [Canis lupus familiaris]
Length = 770
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 91/202 (45%), Gaps = 46/202 (22%)
Query: 19 YGAMARDKHELGVTLMQVKATDKD---SGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
Y A+ + G ++QV ATD D SG + Y LL YF+++P T
Sbjct: 152 YEAIVPEMSPEGTLVIQVTATDADDPASGNNARLLYSLLQ----GQPYFSIEPTTGVIRI 207
Query: 71 --EHQGPIQDE--------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
+ +QDE G LS T +V I+++D+ND P F+ Y +V E
Sbjct: 208 SSKMDRELQDEYWVIIQAKDMIGLPGALSGTTSVLIKLSDVNDNKPIFKERLYRLTVSES 267
Query: 115 Q-DGLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTN-----------KALD 162
G ++GR+ A D D G+NA + YS+ + D+ T DI TN K +D
Sbjct: 268 APTGTSIGRIMAYDNDIGENAEMDYSIED------DSQTFDIITNNETQEGIVILKKKVD 321
Query: 163 YEKQQLYLERVFLISKFATSYL 184
+E Q YL R + ++ +L
Sbjct: 322 FEHQNHYLIRANVKNRHVAEHL 343
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
IRV+DIND P+F PYE VPE +G V +V ATDAD+ G NA + YS+ + P
Sbjct: 135 IRVSDINDNEPKFLDEPYEAIVPEMSPEGTLVIQVTATDADDPASGNNARLLYSLLQGQP 194
Query: 146 -FVVDANTGDIRTNKALDYEKQQLYL 170
F ++ TG IR + +D E Q Y
Sbjct: 195 YFSIEPTTGVIRISSKMDRELQDEYW 220
>gi|344265052|ref|XP_003404601.1| PREDICTED: protocadherin beta-3-like [Loxodonta africana]
Length = 782
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 72/175 (41%), Gaps = 26/175 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
Y + L ++ V ATD D+G FG + Y + + F L+P T G IQ
Sbjct: 246 LYEVQILENSPLNSVIVTVSATDLDTGNFGTITYAFSHASEEILKTFQLNPIT---GDIQ 302
Query: 78 --------------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG 117
D GGLS +TV I+V D+ND PE +PE
Sbjct: 303 LVKYLNFETINTYEVDVEAKDGGGLSGKSTVIIQVVDVNDNPPELTLSSVNSPIPENSLE 362
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIPFVVDA---NTGDIRTNKALDYEKQQLY 169
V +D D G N + S+P D+PF++ N + + ALD EK+ Y
Sbjct: 363 TVVAIFRISDLDSGDNGRMKCSIPNDLPFILKPAAENFYILVSKGALDREKRDQY 417
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 72/175 (41%), Gaps = 32/175 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL-------------DNNTDAASYFN 65
Y R+ + + + V ATD+DSG V Y LL N D F
Sbjct: 456 YTLFVRENNSPALHMGTVSATDRDSGSNAQVTYSLLPAQDPHLPLASLVSINADNGHLFA 515
Query: 66 LDP-------ATEHQGPIQDEG--GLSSTATVNIRVTDINDKNP------EFQSLPYEFS 110
L A E + D G LSS A V + V D ND +P + S P
Sbjct: 516 LRSLDYEALRAFEFRVGAADAGFPALSSEALVRVEVVDDNDNSPFVLYPLQNGSAPCTEL 575
Query: 111 VPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL 161
VP + G V +V A D+D GQNA + Y + E F V A+ G++RT + L
Sbjct: 576 VPRAAEAGSLVTKVVAVDSDSGQNAWLSYQLLKATEPGLFSVWAHNGEVRTARLL 630
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS- 139
L + + + V+D+ND P F Y V E L +G V ATD D G NA V YS
Sbjct: 431 LETQHNIMVWVSDVNDNAPTFTQTSYTLFVRENNSPALHMGTVSATDRDSGSNAQVTYSL 490
Query: 140 VPEDIPFV-------VDANTGDIRTNKALDYEKQQLYLERV 173
+P P + ++A+ G + ++LDYE + + RV
Sbjct: 491 LPAQDPHLPLASLVSINADNGHLFALRSLDYEALRAFEFRV 531
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS-- 139
S TA +NI V DIND PEF YE + E + V ATD D G + Y+
Sbjct: 223 SGTARINILVLDINDNAPEFAQPLYEVQILENSPLNSVIVTVSATDLDTGNFGTITYAFS 282
Query: 140 -VPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
E+I F ++ TGDI+ K L++E Y
Sbjct: 283 HASEEILKTFQLNPITGDIQLVKYLNFETINTY 315
>gi|327273774|ref|XP_003221655.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1-like [Anolis
carolinensis]
Length = 4585
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 81/155 (52%), Gaps = 22/155 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI-- 76
L + +V+ATDKD+G +G V Y ++++ Y N LD T + I
Sbjct: 2508 LHTLVTEVRATDKDTGHYGAVTYHIVNDFAQDRFYTNERGQIFTSEKLDRETPAEKVIFI 2567
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEG 131
+D GG + +VN+ +TD+ND P F++ YE ++ + G +V +V A+DADEG
Sbjct: 2568 RLMAKDSGGKVAFCSVNVILTDVNDNAPLFRATEYEVNISSDVPRGTSVIKVLASDADEG 2627
Query: 132 QNAVVYYSVPEDIPFV-----VDANTGDIRTNKAL 161
NA + Y++ D P V ++ TG I T ++L
Sbjct: 2628 TNADITYTMEADSPSVQENLEINHLTGVITTKESL 2662
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 23/161 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY A + +G ++++V ATD DSG + Y L++NN+++ YF++D +T
Sbjct: 2288 FYTATLSEAAVIGTSVVRVWATDADSGTNRGISYHLVENNSNSHEYFHIDSSTGIILISR 2347
Query: 71 --------EHQGPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDG 117
+H ++ D G LSS V + +TD+ND P F L YE ++ E G
Sbjct: 2348 SLDYEQSRQHTLLVRAIDSGMPPLSSDVVVTVGITDLNDNPPVFNQLLYEANISELAPRG 2407
Query: 118 LAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
V V A+DAD + YS+ + + FV+++ TG I
Sbjct: 2408 HFVTCVKASDADTSDVGKLEYSILTGNDHMNFVINSKTGII 2448
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 87/183 (47%), Gaps = 30/183 (16%)
Query: 11 EMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT 70
E DS F + +L ++QV+A D+D G G V Y +L +TD F++D T
Sbjct: 822 EFLQDSYFVDV--SENKDLDTEIIQVEAIDRDLGTNGEVRYSIL-TDTDK---FSIDSVT 875
Query: 71 ---------------------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF 109
E + ++E LSST + + + D+ND P+F L Y
Sbjct: 876 GIVKVIGSLDREAQSVHFLKIEARDQAKEESQLSSTVLLKVSLEDVNDNPPKFIPLNYRV 935
Query: 110 SVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQ 166
+ E +G + + A D D GQ++ V YS+ + + F VD +G IR + LD+E++
Sbjct: 936 KIREDLPEGTIITWLEAYDPDVGQSSQVRYSLLDGGEGSFDVDKLSGAIRIVQGLDFERK 995
Query: 167 QLY 169
Q+Y
Sbjct: 996 QMY 998
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 58/103 (56%), Gaps = 7/103 (6%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP- 141
++ V I V D+N +PEF + Y+ S E G +V RV+A D DEG+N V YS+
Sbjct: 446 ASTRVLIEVIDVNTHSPEFTQMSYKASFDENVPIGTSVMRVNAKDLDEGENGYVTYSIAN 505
Query: 142 -EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSY 183
+PFV++ TG I T++ +DYE + RV+ + A+ +
Sbjct: 506 INPVPFVINHFTGVISTSENMDYE----LMPRVYKLRVRASDW 544
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 79/180 (43%), Gaps = 28/180 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL-DNNTDAASYFNLDPAT------- 70
Y A + G ++Q+KATD+DSG G V YRL + D + F ++ T
Sbjct: 2815 YKAFIVENMPAGTRVIQIKATDQDSGSNGQVTYRLYPAQDADISESFAINAETGWITTLK 2874
Query: 71 ----EHQGPIQ------DEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-D 116
E Q + D G L+STA V + VTD+ND P F + Y+ +V E
Sbjct: 2875 ELDHEKQNKYKITVVASDRGEKVQLTSTAVVEVSVTDVNDNPPRFTAEIYKGTVSEDDPT 2934
Query: 117 GLAVGRVHATDAD-EGQNAVVYYSVPEDIP---FVVD--ANTGDIRTNKALDYEKQQLYL 170
G V + TDAD E N V Y + P F V+ N + K LD E + YL
Sbjct: 2935 GGVVAILSTTDADSEDVNRQVSYFITGGDPLGQFAVENIQNEWKVYVRKPLDREVKDNYL 2994
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAVVYYSV-- 140
S+ ++I++ D+ND P +S PY+ F V G V ++ ATD D G N V Y +
Sbjct: 2792 SSVDISIQIRDVNDNKPVIESNPYKAFIVENMPAGTRVIQIKATDQDSGSNGQVTYRLYP 2851
Query: 141 --PEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
DI F ++A TG I T K LD+EKQ Y
Sbjct: 2852 AQDADISESFAINAETGWITTLKELDHEKQNKY 2884
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNAVVYYSV 140
L + V + V DIND P F SLPY +V + + G + RV A D D G+N V+YS+
Sbjct: 2062 LIAHVVVKVTVEDINDNAPVFVSLPYYATVKIDMEVGQVIRRVTAVDKDIGRNGEVHYSL 2121
Query: 141 PEDIPFVVDANTGDIRTNKALD 162
ED NTG+I K D
Sbjct: 2122 KEDYGHFQIGNTGEISLKKPFD 2143
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 30/187 (16%)
Query: 6 IPSALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN 65
+P+++E+ D L +G + + ATD D+G G + Y + N D++
Sbjct: 721 LPNSIEIKEDLL-----------VGSNIQLINATDLDTGFNGKLVYAISGGNNDSSFVIG 769
Query: 66 LDPA-----TEHQGPIQDEGGL------------SSTATVNIRVTDINDKNPEFQSLPYE 108
++ + ++D+ L S+ ++IRV D ND +PEF Y
Sbjct: 770 METGMLKILSPLDREVKDKYTLNFTVYDLGIPQKSAWRLLDIRVLDANDNHPEFLQDSYF 829
Query: 109 FSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQ 166
V E +D + +V A D D G N V YS+ D F +D+ TG ++ +LD E Q
Sbjct: 830 VDVSENKDLDTEIIQVEAIDRDLGTNGEVRYSILTDTDKFSIDSVTGIVKVIGSLDREAQ 889
Query: 167 QLYLERV 173
++ ++
Sbjct: 890 SVHFLKI 896
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 58/144 (40%), Gaps = 2/144 (1%)
Query: 37 KATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIN 96
KA + G F + R NT + D I+ + + ++V D N
Sbjct: 85 KAEEHILGDFCFLRIRTKGGNTAILNREVKDHYVLTVKAIEKNTNAEARTKIRVQVLDTN 144
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGD 154
D P F Y SVPE ++ RV ATDAD G N YYS E F + +G
Sbjct: 145 DLRPLFSPTSYSVSVPENTAIRTSIARVSATDADIGTNGEFYYSFKERTDMFAIHPTSGV 204
Query: 155 IRTNKALDYEKQQLYLERVFLISK 178
I LDY + ++Y + + +
Sbjct: 205 IVLTGRLDYSESKVYEMEILAVDR 228
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 66/158 (41%), Gaps = 21/158 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPI--- 76
G +MQ+ ATD D + Y L A F+L P T Q +
Sbjct: 3040 GKLIMQILATDADIRSNAEITYTL---QGAGAEDFSLSPDTGELKTLAALDREQKSVYTF 3096
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D GG A + + + D+ND PEF + PY +V E + + RV ATDAD G
Sbjct: 3097 MVKASDGGGRFCQANIILNIEDVNDNIPEFTTDPYTITVFENTEPKTLLTRVQATDADAG 3156
Query: 132 QNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V + F ++ +G + KALD E Q +Y
Sbjct: 3157 LFRNSLSLVSQQWQFSINELSGMXQLEKALDRELQPVY 3194
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 72/177 (40%), Gaps = 31/177 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y A + G+ ++QV A +D + Y ++ N F++D T G I
Sbjct: 3234 YSATVSEDAVAGIEILQVYAASRDIEANAEITYSIISGNEHGK--FSIDSKT---GAIFI 3288
Query: 79 EGGL----------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
GGL S TVNI VTDIND P F Y + E +
Sbjct: 3289 IGGLDYESSPEYYLTVEATDGGTPSLSDVVTVNINVTDINDNTPVFSQDTYTAVISEDAE 3348
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V V A D+D N+ + YS+ ++ F +D G+++ K LD EK Y
Sbjct: 3349 VEQSVVTVMAADSDGPLNSHIRYSIIDGNQENQFTIDPTLGEVKVAKLLDREKISGY 3405
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 76/171 (44%), Gaps = 20/171 (11%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL--------LDNNTDAASYFNLD 67
SL Y A + E+G + +V A DKD G+ G V Y L + N + + D
Sbjct: 2084 SLPYYATVKIDMEVGQVIRRVTAVDKDIGRNGEVHYSLKEDYGHFQIGNTGEISLKKPFD 2143
Query: 68 PATEHQGPI-----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVG 121
P T ++ I D G + +A V +T +N P F+ Y +PE Q V
Sbjct: 2144 PDTLNEEYIITVVATDGGQPAFSAEVTFPITVVNKAMPVFEKAFYSAEIPENIQIHSPVV 2203
Query: 122 RVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
V A ++ EG V+YS+ + P F ++ NTG I T LD+E Y
Sbjct: 2204 HVQA-NSPEGLR--VFYSITDGDPFSQFTINFNTGVINTFAPLDFESHPAY 2251
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 7/96 (7%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVY 137
+G ++ A V ++V D ND +P + + Y ++PE G + ++ ATDAD NA +
Sbjct: 3001 DGMFATKAVVEVKVLDSNDNSPVCEKMLYTETIPEDAPPGKLIMQILATDADIRSNAEIT 3060
Query: 138 YSV----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ ED F + +TG+++T ALD E++ +Y
Sbjct: 3061 YTLQGAGAED--FSLSPDTGELKTLAALDREQKSVY 3094
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G + V+I + DIND P F Y ++ E G +V RV ATDAD G N + Y
Sbjct: 2263 GAHAEVFVDIVIEDINDNPPLFTEQFYTATLSEAAVIGTSVVRVWATDADSGTNRGISYH 2322
Query: 140 VPEDIP-----FVVDANTGDIRTNKALDYEKQQ 167
+ E+ F +D++TG I +++LDYE+ +
Sbjct: 2323 LVENNSNSHEYFHIDSSTGIILISRSLDYEQSR 2355
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 78/178 (43%), Gaps = 21/178 (11%)
Query: 11 EMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKF----GLVEYRLLDNNTDAASYFNL 66
E T+D Y + E L +V+ATD D+G F LV + + + + L
Sbjct: 3125 EFTTDP--YTITVFENTEPKTLLTRVQATDADAGLFRNSLSLVSQQWQFSINELSGMXQL 3182
Query: 67 DPATEHQ----------GPIQDE-GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-G 114
+ A + + G ++D LSST + + V DIND P F+ Y +V E
Sbjct: 3183 EKALDRELQPVYSLTLKGKMKDSPRRLSSTGILVVSVLDINDNPPVFEYREYSATVSEDA 3242
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G+ + +V+A D NA + YS+ E F +D+ TG I LDYE Y
Sbjct: 3243 VAGIEILQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAIFIIGGLDYESSPEY 3300
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR--------VHATDADEG 131
G S+ T+ + + D ND P F Y + E +V + ATDAD+
Sbjct: 1744 AGQSANTTLLVHLQDKNDNAPTFMQTEYTGHISESASANSVVLTDRHVPLVIRATDADKD 1803
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
NA++ Y + E F +D++TG IRT +LDYE++ +
Sbjct: 1804 SNALLVYQIVEPSVHKYFTIDSSTGAIRTVMSLDYEERNTF 1844
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 72/162 (44%), Gaps = 28/162 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASY--FNLDPATE-------------HQGPI- 76
++QV A+DKD K L+ + ++ D S F+LDPAT HQ +
Sbjct: 1476 ILQVSASDKDE-KNKLI--YTMQSSVDPVSLKKFHLDPATGSLYTSEKLDHEVIHQHVLT 1532
Query: 77 -----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
QD + A V I V+D ND P F S Y+ V E G V +V A D D+
Sbjct: 1533 VMVRDQDVPVKRNFARVIINVSDTNDHAPWFTSSSYKGRVFESAAVGSMVLQVTALDKDK 1592
Query: 131 GQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
G+NA + YS+ F + G I T K LD Q+ Y
Sbjct: 1593 GENAEIVYSIESGNTGNAFNIHPILGSITTAKELDQSSQEEY 1634
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 71/160 (44%), Gaps = 33/160 (20%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------------EH-- 72
V+++Q++A D DS + Y++ N +F+++P T EH
Sbjct: 1157 VSVIQIEAFDADSTANDKLTYKITSGNPQG--FFSMNPKTGLITTTSRKLDREQQSEHIL 1214
Query: 73 QGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ--------DGLAVGR 122
+ + D G S+ A V +++ D ND P+F Y+ +PE + + R
Sbjct: 1215 EVTVTDNGIPPKSTLARVIVKILDENDNRPQFLQKFYQIKLPEREKPERERTAKREPIYR 1274
Query: 123 VHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNK 159
V A D DEG NA + YS+ E F +D TG + + K
Sbjct: 1275 VVAADKDEGPNAEISYSIEEGDEHGKFFIDPITGIVSSKK 1314
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 73/173 (42%), Gaps = 28/173 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------ATE 71
Y + +G ++QV A DKD G+ + Y + NT A FN+ P A E
Sbjct: 1568 YKGRVFESAAVGSMVLQVTALDKDKGENAEIVYSIESGNTGNA--FNIHPILGSITTAKE 1625
Query: 72 HQGPIQDEGGL------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
Q+E L S +V+I VT ++ +P+F Y + EG G
Sbjct: 1626 LDQSSQEEYTLMVRATDKGSPPMSEVTSVHISVTISDNASPKFTMREYSTEIGEGCSIGS 1685
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
VG V A Q++VVY + F ++ N+G I + K LD+E Y
Sbjct: 1686 FVGMVIA----HSQSSVVYEIKDGNTGDVFTINPNSGVITSQKTLDFETLSFY 1734
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 75/172 (43%), Gaps = 32/172 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ----------- 77
+G +M V A D+D+G+ G V Y + D + F +D E +G I
Sbjct: 1050 IGSLVMTVSAFDEDTGRDGEVRYSIRDGS--GVGIFTID---EEKGTITTVDLLDRETTS 1104
Query: 78 ---------DEG--GLSSTATVNIRVTDINDKNPE-FQSLPYEFSVPEGQDGLAVGRVHA 125
D+G LSS + I V D+ND P+ Q + Y + ++V ++ A
Sbjct: 1105 HYWLTVYAADQGVVPLSSFVEIYIEVGDVNDNAPQTTQPVYYPEVMENSPKDVSVIQIEA 1164
Query: 126 TDADEGQNAVVYYSVPEDIP---FVVDANTGDI-RTNKALDYEKQQLYLERV 173
DAD N + Y + P F ++ TG I T++ LD E+Q ++ V
Sbjct: 1165 FDADSTANDKLTYKITSGNPQGFFSMNPKTGLITTTSRKLDREQQSEHILEV 1216
Score = 39.3 bits (90), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 27/147 (18%)
Query: 34 MQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQDEGGL 82
+ ++ATD D L+ Y++++ YF +D +T E + + +
Sbjct: 1793 LVIRATDADKDSNALLVYQIVE--PSVHKYFTIDSSTGAIRTVMSLDYEERNTFRFSVQV 1850
Query: 83 SSTAT----------VNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEG 131
S T V IRV DIND P F YE +V G+ V V+ATDAD
Sbjct: 1851 SDMGTPRLFAEYAANVTIRVIDINDCPPVFSKDLYEATVLVPTYKGVKVVMVNATDADSE 1910
Query: 132 QNAVVYYSVPEDI---PFVVDANTGDI 155
+ + YS+ E F +D+ TG I
Sbjct: 1911 TFSRLMYSITEGNIGEKFSIDSKTGQI 1937
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 66/186 (35%), Gaps = 26/186 (13%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN--------- 65
+ L Y A + G + VKA+D D+ G +EY +L N N
Sbjct: 2392 NQLLYEANISELAPRGHFVTCVKASDADTSDVGKLEYSILTGNDHMNFVINSKTGIITLS 2451
Query: 66 ------LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
L P + D G S A V I V N +P F YE + E
Sbjct: 2452 NVHKQTLKPVYRLNVSVSD-GVFRSPAQVLINVIGANLHSPLFSQKEYEVELSENAPLHT 2510
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIPFVVDA----NTGDIRTNKALDYEKQQLYLERVF 174
V V ATD D G V Y + D F D G I T++ LD E E+V
Sbjct: 2511 LVTEVRATDKDTGHYGAVTYHIVND--FAQDRFYTNERGQIFTSEKLDRETPA---EKVI 2565
Query: 175 LISKFA 180
I A
Sbjct: 2566 FIRLMA 2571
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V I+V D ND PEF + Y+ +PE + +V A+D DE +N ++Y P
Sbjct: 1443 VYIKVIDTNDHRPEFSTSEYQVIIPEDTMPETEILQVSASDKDE-KNKLIYTMQSSVDPV 1501
Query: 146 ----FVVDANTGDIRTNKALDYE 164
F +D TG + T++ LD+E
Sbjct: 1502 SLKKFHLDPATGSLYTSEKLDHE 1524
Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 22/140 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQ--GPI 76
Y A+ + E+ +++ V A D D + Y ++D N + + F +DP +
Sbjct: 3339 YTAVISEDAEVEQSVVTVMAADSDGPLNSHIRYSIIDGNQE--NQFTIDPTLGEVKVAKL 3396
Query: 77 QDEGGLS-----------------STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
D +S +T TVNI V+D+ND P F Y + E + G
Sbjct: 3397 LDREKISGYTLTVQASDNGNPPGINTTTVNIDVSDVNDNPPVFSKGNYSIIIQENKPVGF 3456
Query: 119 AVGRVHATDADEGQNAVVYY 138
+ ++ TD D N ++
Sbjct: 3457 NIQQLEVTDKDSSHNGPPFF 3476
Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 71/185 (38%), Gaps = 31/185 (16%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------------------- 56
L Y R+ G + ++A D D G+ V Y LLD
Sbjct: 931 LNYRVKIREDLPEGTIITWLEAYDPDVGQSSQVRYSLLDGGEGSFDVDKLSGAIRIVQGL 990
Query: 57 NTDAASYFNLDPATEHQG-PIQDEGGLSSTATVNIRVTDINDK--NPEFQSLPYEFSVPE 113
+ + +NL + +G PI +SST V I V D+N+ P F + + V E
Sbjct: 991 DFERKQMYNLTVRAKDKGKPI----SMSSTCYVEIEVVDVNENLHPPRFPNFVDKGFVNE 1046
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
G V V A D D G++ V YS+ + F +D G I T LD E Y
Sbjct: 1047 DVPIGSLVMTVSAFDEDTGRDGEVRYSIRDGSGVGIFTIDEEKGTITTVDLLDRETTSHY 1106
Query: 170 LERVF 174
V+
Sbjct: 1107 WLTVY 1111
Score = 35.8 bits (81), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 75/182 (41%), Gaps = 21/182 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGL-VEYRLLDNNTDAASYFN----LDPATEHQ 73
Y + ++ +G + Q++ TDKDS G + ++ N D A N L A +
Sbjct: 3444 YSIIIQENKPVGFNIQQLEVTDKDSSHNGPPFFFTIVSGNEDYAFEINQQGELTTAIHLK 3503
Query: 74 GPIQD------------EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAV 120
++D LSS A V+IRV + + P L + G+ G +
Sbjct: 3504 RKVKDHYFLHLKVADNGRPQLSSLAYVDIRVIEESIHPPAILPLEIFITAFGGEYSGGVI 3563
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180
G+VHATD D + + Y ++ F V G + +K LD Q +L KF
Sbjct: 3564 GKVHATDQDV-YDTLTYSLDSKESVFSVSGTGGKLIAHKKLD--AGQYFLNISVTDGKFT 3620
Query: 181 TS 182
T+
Sbjct: 3621 TT 3622
>gi|359324191|ref|XP_851109.3| PREDICTED: LOW QUALITY PROTEIN: protocadherin-11 X-linked [Canis
lupus familiaris]
Length = 1308
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 78/165 (47%), Gaps = 32/165 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G L ++ A D DSG + Y L DA S FNLD H G +
Sbjct: 482 GTKLTEISAMDADSGHNAEINYLL---GVDAPSEFNLD---HHTGILTVVKKLDREKQEK 535
Query: 77 -------QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--QDGLAVGRVHA 125
+D+G L + ATV++ + D ND +P F Y F VPE + G VG +
Sbjct: 536 YSFTVLAKDKGMPSLITNATVSVTILDQNDNSPIFTHNEYNFYVPENLPRHG-TVGLITV 594
Query: 126 TDADEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLY 169
TD D G+N+VV S+ + + F +D TG I+ N + D EKQ+ Y
Sbjct: 595 TDPDYGENSVVTLSILDLNDEFTIDPQTGVIQPNISFDREKQERY 639
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 67/153 (43%), Gaps = 36/153 (23%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ-------------- 77
T+ + TD D G+ +V +LD N + F +DP T G IQ
Sbjct: 588 TVGLITVTDPDYGENSVVTLSILDLNDE----FTIDPQT---GVIQPNISFDREKQERYT 640
Query: 78 -----DEGGL---SSTATVNIRVTDINDKNPEF----QSLPYEFSVPEGQDGLAVGRVHA 125
++GG SSTA V I V D+ND P F + YE +P G V V A
Sbjct: 641 FYVKAEDGGKISHSSTAKVTINVVDVNDNKPVFIVPSSNNSYELVLPSTNPGTVVFTVFA 700
Query: 126 TDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
D D G NA ++YS+ F++D TG+I
Sbjct: 701 VDNDTGMNAELHYSIVGGNTKSLFIIDQTTGNI 733
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 78 DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
++GG SSTA + I V D ND P F+ E ++PE G +V ++HATDAD G+N
Sbjct: 222 EDGGFPQRSSTAILQISVADTNDNCPVFKEDEIEVNIPENAPVGTSVTQLHATDADIGEN 281
Query: 134 AVV--YYS-VPEDIP---FVVDANTGDIRTNKALDYE 164
A + Y+S + +I F ++ TG I + LD E
Sbjct: 282 AKIQFYFSNLVSNIAKRLFHLNTTTGLITIQEPLDRE 318
Score = 36.2 bits (82), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 69/175 (39%), Gaps = 30/175 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEY-----------RLLDNNTDAASYFNLDPATEHQGP-- 75
+G ++ Q+ ATD D G+ +++ RL NT +P P
Sbjct: 264 VGTSVTQLHATDADIGENAKIQFYFSNLVSNIAKRLFHLNTTTGLITIQEPLDREASPNH 323
Query: 76 ----IQDEGGL-SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA--------VGR 122
+ +GGL + A V + VTDIND P + Y + G L+ +
Sbjct: 324 KLLILASDGGLIPAKAMVLVNVTDINDNAPSID-IRYIINPINGTVVLSENAPLNTKIAL 382
Query: 123 VHATDADEGQNAVVYYSVPEDIPFV---VDANTGDIRTNKALDYEKQQLYLERVF 174
+ TD D N +V ++PF V +N + T LDYE + Y ++
Sbjct: 383 ITVTDKDADHNGMVTCFTDHEVPFRLRPVFSNQFLLETAAYLDYESTREYAIKLL 437
>gi|426394875|ref|XP_004063710.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Gorilla
gorilla gorilla]
Length = 3010
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 24/174 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA------------ASYFNL 66
Y R+ E+G ++ ++A+D+DS + YR+L D + +
Sbjct: 359 YRERVRENLEVGYEVLTIRASDRDSPINANLRYRVLGGAWDVFQLNESSGVVSTRAVLDR 418
Query: 67 DPATEHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-- 118
+ A E+Q ++ + G LS+TATV I V D ND P+F Y VPE GL
Sbjct: 419 EEAAEYQLLVEANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNYVVQVPE-DVGLNT 477
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLY 169
AV RV ATD D+GQNA ++YS+ F + + +G + LD+E Q Y
Sbjct: 478 AVLRVQATDRDQGQNAAIHYSILSGNVAGQFYLHSLSGILDVINPLDFEDVQKY 531
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQ-- 73
+G +++ ++A D+D+ ++ Y+L NT + LD E Q
Sbjct: 703 VGSSVLTLQARDRDANS--VITYQLTGGNTRNRFALSSQRGGGLITLALPLDYKQEQQYV 760
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G S TA V I VTD N P FQS Y SV E + G ++ + A D D G
Sbjct: 761 LAVTASDGTRSHTAHVLINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATLSANDEDTG 820
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + +P F +D ++G + T LDYE Q Y
Sbjct: 821 ENARITYVIQDPVPQFRIDPDSGIMYTMMELDYENQVAY 859
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 39/180 (21%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN--------LDP-----ATEHQGP 75
L +++V+ATD+D G+ + Y +L N Y + ++P ++
Sbjct: 475 LNTAVLRVQATDRDQGQNAAIHYSILSGNVAGQFYLHSLSGILDVINPLDFEDVQKYSLS 534
Query: 76 IQDEGG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
I+ + G ++S+ V+++V D+ND P F S P++ +V E G V + A DAD
Sbjct: 535 IKAQDGGRPPLINSSGVVSVQVLDVNDNEPIFVSSPFQATVLENVPLGYPVVHIQAVDAD 594
Query: 130 EGQNAVVYYSVPE--------------------DIPFVVDANTGDIRTNKALDYEKQQLY 169
G+NA ++Y + + D PF + ++G I LD E+ + Y
Sbjct: 595 SGENARLHYRLVDTASAFLGGGSAGPKNPAPTPDFPFQIHNSSGWITVCAELDREEVEHY 654
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 74/167 (44%), Gaps = 33/167 (19%)
Query: 32 TLMQVKATDKDSGKFGLVEY------------------------RLLDNNTDAASYFNLD 67
+++QV ATD+DSG G + Y R LD + A Y
Sbjct: 911 SILQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRE-NVAVYNLWA 969
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
A + P LS++ + + + DIND P F+ E V E G V ++ A
Sbjct: 970 LAVDRGSPTP----LSASVEIQVTILDINDNAPMFEKDELELFVEENNPVGSVVAKIRAN 1025
Query: 127 DADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
D DEG NA + Y + E D+ F +D +GD+R LD+E ++ Y+
Sbjct: 1026 DPDEGPNAQIMYQIVEGDMRHFFQLDLLSGDLRAMVELDFEVRREYV 1072
Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y + +G ++ + A D+D+G+ + Y + D F +DP +
Sbjct: 792 SSHYTVSVSEDRPVGTSIATLSANDEDTGENARITYVI----QDPVPQFRIDPDSGIMYT 847
Query: 71 ------EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E+Q QD G S T T+ I + D ND P+F Y+ S+ E
Sbjct: 848 MMELDYENQVAYTLTIMAQDNGIPQKSDTTTLEILILDANDNAPQFLWDFYQGSIFEDAP 907
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ +V ATD D G N + Y+ D F ++ +G IRT + LD E +Y
Sbjct: 908 PSTSILQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRENVAVY 965
>gi|397482525|ref|XP_003812473.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Pan
paniscus]
Length = 2821
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 24/174 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA------------ASYFNL 66
Y R+ E+G ++ ++A+D+DS + YR+L D + +
Sbjct: 218 YRERVRENLEVGYEVLTIRASDRDSPINANLRYRVLGGAWDVFQLNESSGVVSTRAVLDR 277
Query: 67 DPATEHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-- 118
+ A E+Q ++ + G LS+TATV I V D ND P+F Y VPE GL
Sbjct: 278 EEAAEYQLLVEANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNYVVQVPE-DVGLNT 336
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLY 169
AV RV ATD D+GQNA ++YS+ F + + +G + LD+E Q Y
Sbjct: 337 AVLRVQATDRDQGQNAAIHYSILSGNVAGQFYLHSLSGILDVINPLDFEDVQKY 390
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQ-- 73
+G +++ ++A D+D+ ++ Y+L NT + LD E Q
Sbjct: 562 VGSSVLTLQARDRDANS--VITYQLTGGNTRNRFALSSQRGGGLITLALPLDYKQEQQYV 619
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G S TA V I VTD N P FQS Y SV E + G ++ + A D D G
Sbjct: 620 LAVTASDGTRSHTAHVLINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATLSANDEDTG 679
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + +P F +D ++G + T LDYE Q Y
Sbjct: 680 ENARITYVIQDPVPQFRIDPDSGTMYTMMELDYENQVAY 718
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 39/180 (21%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN--------LDP-----ATEHQGP 75
L +++V+ATD+D G+ + Y +L N Y + ++P ++
Sbjct: 334 LNTAVLRVQATDRDQGQNAAIHYSILSGNVAGQFYLHSLSGILDVINPLDFEDVQKYSLS 393
Query: 76 IQDEGG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
I+ + G ++S+ V+++V D+ND P F S P++ +V E G V + A DAD
Sbjct: 394 IKAQDGGRPPLINSSGVVSVQVLDVNDNEPIFVSSPFQATVLENVPLGYPVVHIQAVDAD 453
Query: 130 EGQNAVVYYSVPE--------------------DIPFVVDANTGDIRTNKALDYEKQQLY 169
G+NA ++Y + + D PF + ++G I LD E+ + Y
Sbjct: 454 SGENARLHYRLVDTASAFLGGGSAGPKNPAPTPDFPFQIHNSSGWITVCAELDREEVEHY 513
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 31/166 (18%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ-------------- 77
+++QV ATD+DSG G + Y ++ ++ ++P + G I+
Sbjct: 770 SILQVSATDRDSGPNGRLLYTFQGGDSGDGDFY-IEPTS---GVIRTQRRLDRENVAVYN 825
Query: 78 ------DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
D G LS++ + + + DIND P F+ E V E G V ++ A D
Sbjct: 826 LWALAVDRGSPTPLSTSVEIQVTILDINDNAPMFEKDELELFVEENNPVGSVVAKIRAHD 885
Query: 128 ADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
DEG NA + Y + E D+ F +D GD+R LD+E ++ Y+
Sbjct: 886 PDEGPNAQIMYQIVEGDMRHFFQLDLLNGDLRAMVELDFEVRREYV 931
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y + +G ++ + A D+D+G+ + Y + D F +DP +
Sbjct: 651 SSHYTVSVSEDRPVGTSIATLSANDEDTGENARITYVI----QDPVPQFRIDPDSGTMYT 706
Query: 71 ------EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E+Q QD G S T T+ I + D ND P+F Y+ S+ E
Sbjct: 707 MMELDYENQVAYTLTIMAQDNGIPQKSDTTTLEILILDANDNAPQFLWDFYQGSIFEDAP 766
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ +V ATD D G N + Y+ D F ++ +G IRT + LD E +Y
Sbjct: 767 PSTSILQVSATDRDSGPNGRLLYTFQGGDSGDGDFYIEPTSGVIRTQRRLDRENVAVY 824
>gi|397518008|ref|XP_003829192.1| PREDICTED: protocadherin beta-13-like [Pan paniscus]
Length = 798
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 19/171 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY + +G +++V ATD D+G G + Y L + + F ++P T
Sbjct: 247 FYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKK 306
Query: 71 ----------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
E +D G S TV I+V D+ND PE + +PE V
Sbjct: 307 QLDFEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVV 366
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDA--NTGDIRTNKALDYEKQQLY 169
+D D G+N + S+ ED+PF++ + N + T + LD E + Y
Sbjct: 367 ALFSVSDLDSGENGKISCSIQEDLPFLLKSAENFYTLLTERPLDRESRAEY 417
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
S TA V I V D+ND PEF+ Y + E G V +V ATD D G N + YS+
Sbjct: 224 SGTAQVYIEVLDVNDNAPEFEQPFYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLF 283
Query: 141 --PEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
E+I F ++ TG+I K LD+EK Q Y
Sbjct: 284 QASEEIGKTFKINPLTGEIELKKQLDFEKLQSY 316
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L + + + + D+ND P F Y V E L +G V ATD D G NA V YS+
Sbjct: 431 LKTQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSL 490
Query: 141 --PED--IPFV----VDANTGDIRTNKALDYEKQQLYLERV 173
P+D +P ++A G + ++LDYE Q + RV
Sbjct: 491 LPPQDPHLPLTSLVSINAENGHLFALRSLDYEALQGFEFRV 531
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 83/197 (42%), Gaps = 39/197 (19%)
Query: 9 ALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL---DNNTDAASYFN 65
A TS +LF R+ + + + V ATD+DSG V Y LL D + S +
Sbjct: 450 AFTQTSYTLF----VRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLTSLVS 505
Query: 66 LDPATEHQGPIQ-----------------DEG--GLSSTATVNIRVTDINDKNP------ 100
++ H ++ D G LSS A V + V D ND +P
Sbjct: 506 INAENGHLFALRSLDYEALQGFEFRVGASDHGSPALSSEALVRVLVLDANDNSPFVLYPL 565
Query: 101 EFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIR 156
+ S P VP + G V +V A D D GQNA + Y + E F V A+ G++R
Sbjct: 566 QNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVR 625
Query: 157 TNKAL---DYEKQQLYL 170
T + L D K +L +
Sbjct: 626 TARLLSERDAAKHRLVV 642
>gi|194674457|ref|XP_001789138.1| PREDICTED: protocadherin-23 [Bos taurus]
Length = 3360
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 88/181 (48%), Gaps = 25/181 (13%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQG 74
F A R+ +G + + A D D+G+ G V + +L N + A F LD ++
Sbjct: 1611 FPIAHVREDAAVGSLVHHITAQDPDAGRNGRVTFSILSGNENMA--FMLDESSGFLTTAS 1668
Query: 75 PIQDE-------------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
P+ E GG LSS+ T+ I V D+ND+ P F+ YE SV E Q+ G
Sbjct: 1669 PLDYEIKSQHILTLLALDGGTPTLSSSQTLTITVLDVNDEAPVFKQHLYEASVKENQNPG 1728
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIPFV---VDANTGDIRTNKALDYEKQQLYLERVF 174
V RV A D D G N+ + + + F+ ++++TG++ T LD E Q++ RV
Sbjct: 1729 EFVTRVEAVDRDSGINSKLQFEIMPGASFMLFQINSDTGEVVTAATLDREVQEVLTLRVL 1788
Query: 175 L 175
+
Sbjct: 1789 V 1789
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 77/172 (44%), Gaps = 30/172 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD--NNTDAASYFNLDPATEHQGPI 76
Y A + +G +QVKA+D D+G +G VEY L + +A F +DP H G I
Sbjct: 656 YNATLPEHAPVGHCFLQVKASDADAGLYGFVEYFLYAGFQSYEAPQAFQIDP---HDGRI 712
Query: 77 ---------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EG 114
+D GGLS+ A V + + D+ND P F L Y S+ +
Sbjct: 713 CVSQDTDRERDPVTYDLLVKAKDGGGLSAQAFVRVELEDVNDNEPVFNPLTYVTSLSGQA 772
Query: 115 QDGLAVGRVHATDADEGQNAVVYYS-VPEDIP--FVVDANTGDIRTNKALDY 163
Q G V V ATD D G+ V Y V D+ F +D+ TG I L +
Sbjct: 773 QLGTEVINVLATDRDSGKYGTVAYELVLGDLSSFFTIDSTTGIIYLTSTLSH 824
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 75/154 (48%), Gaps = 31/154 (20%)
Query: 35 QVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQGPI--Q 77
++ A D+DSGK G + Y LL + +F ++P T HQ +
Sbjct: 1200 KITAIDRDSGKNGQLSYFLLSDE----KFFKMNPNTGELISWVALDHEQRAHHQVAVLVS 1255
Query: 78 DEGG--LSSTATVNIRVTDINDKNPEF-QSLPYE---FSVPEGQD-GLAVGRVHATDADE 130
D G S+T V++ VTDIND P F Q L + V EGQ + V V A D DE
Sbjct: 1256 DHGSPPRSATTLVHVSVTDINDNRPYFPQCLAGKELYVKVLEGQPVNMLVTTVFAKDLDE 1315
Query: 131 GQNAVVYYSVPEDIP---FVVDANTGDIRTNKAL 161
G NA V YSV + F +DAN+G+IRT + L
Sbjct: 1316 GNNAEVIYSVSSEDSSDHFKIDANSGEIRTTRVL 1349
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 71/154 (46%), Gaps = 30/154 (19%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL--------------- 82
A+D D+G G V Y ++D NTD YF ++ E G + L
Sbjct: 1840 ASDMDAGSNGAVTYHIIDGNTD--EYFAVN---EMSGELSTTRALDREEVSNFTLVILCS 1894
Query: 83 -------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNA 134
SSTA + +RV D ND +P F L Y+ SV E Q G V + + D DEG N
Sbjct: 1895 DLGSPPQSSTAQLQVRVLDDNDHSPSFPRLQYQASVREDAQVGTTVLVLSSADEDEGLNG 1954
Query: 135 VVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQ 166
YS+ + F +D G +RT++ALD E +
Sbjct: 1955 QTMYSLVHESSGAFTIDPVAGTLRTSRALDREAR 1988
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 75/175 (42%), Gaps = 30/175 (17%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI 76
L Y + +LG ++ V ATD+DSGK+G V Y L+ D +S+F +D T G I
Sbjct: 762 LTYVTSLSGQAQLGTEVINVLATDRDSGKYGTVAYELVLG--DLSSFFTIDSTT---GII 816
Query: 77 --------------------QDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
+D GGL+S A V I + EF+ Y FSV E
Sbjct: 817 YLTSTLSHLESTTLLLMVCARDGGGLTSVTNAEVTIHILQTTLAPAEFERPKYTFSVYED 876
Query: 115 -QDGLAVGRVHATDADEGQNAVVYY--SVPEDIPFVVDANTGDIRTNKALDYEKQ 166
+ VG V A ++ V Y S D F + G IRT K LD+E Q
Sbjct: 877 VPEDSPVGTVKAKESLNSSEPVFYRISSGNLDGTFSIHPWLGTIRTQKPLDHEAQ 931
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 72/161 (44%), Gaps = 29/161 (18%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------------ATEHQGPIQ 77
++QV ATD DSG GLVEY +L N + F +DP + + +Q
Sbjct: 2249 IVQVFATDLDSGSNGLVEYSILSGN--QGNVFQMDPLSGVLTASAILDYEYTSTYSLIVQ 2306
Query: 78 --DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFS--VPEGQDGLAVGRVHATDADEG 131
D+G LS T + I+VTDIND P F LP E V G V R+ D D
Sbjct: 2307 AMDKGMPRLSDTTVIKIQVTDINDNAPIF--LPSEAVEIVENSLPGTIVTRISVYDVDSN 2364
Query: 132 QNAVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLY 169
A + V E F +D NTG + + LD+E+ Y
Sbjct: 2365 P-AFTFSFVKESNSGTKFAIDRNTGVVVLVETLDFEEATKY 2404
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYY-- 138
LSS+ATV+I V D++D P F SL Y + E G + V A+D D G +A V Y
Sbjct: 2633 LSSSATVSIEVLDVDDNPPAFSSLEYYVHIKESTPPGSPIIVVSASDRDVGSHAEVSYYL 2692
Query: 139 -SVPEDIPFVVDANTGDIRTNKALDYEK 165
S E F ++ TG + K LDYE+
Sbjct: 2693 TSGNEKQHFCLEEKTGVLSLIKPLDYEE 2720
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 73/167 (43%), Gaps = 35/167 (20%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLL-----------DNNTDAASYFNLDPATEHQGPIQ--- 77
T+ V A D D+G +G + Y ++ D+N +F +DP T Q
Sbjct: 2775 TICSVNALDFDAGPYGDMTYSIVSPCPLPHEMPHDHN-----FFLIDPLTGDISAQQVLD 2829
Query: 78 --------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR 122
D+ +++ V + V I++ P F Y FS+PE +GR
Sbjct: 2830 YENDNKYCLIVQAKDKADSTASVVVWVDVEGIDEFEPIFTQDQYFFSLPEKSHVRHLIGR 2889
Query: 123 VHATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEKQQL 168
V A+DAD G + V+ YS+ PF V+ G+I ++AL K Q+
Sbjct: 2890 VEASDADAGVDGVILYSLETPSPFFSVNKTNGNIYLSRALPLIKSQV 2936
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 27/178 (15%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA------- 69
L Y A R+ ++G T++ + + D+D G G Y L+ ++ A F +DP
Sbjct: 1924 LQYQASVREDAQVGTTVLVLSSADEDEGLNGQTMYSLVHESSGA---FTIDPVAGTLRTS 1980
Query: 70 --------TEH--QGPIQD---EGGLSSTATVNIRVTDINDKNPEFQSLPYE-FSVPEGQ 115
+EH + +D +G S+T + + VTD+ND +P + P + F +
Sbjct: 1981 RALDREARSEHVLKAVARDCGVQGSRSTTVVIKVHVTDVNDNSPVLEQNPLDIFLSSQSP 2040
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
+ A+D D G N V +S P+ + ++ TG I+ + E ++L+
Sbjct: 2041 TNQTAAILRASDPDSGPNGTVTFSFAEPQSV-LSINEYTGAIQLQQIPSSEYFPIWLQ 2097
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPE 142
S+ VNI + D+ND P F E +V + G A+ R A D D G N +V YS+
Sbjct: 949 SSTEVNITIIDVNDNPPVFPKASDEVTVSQSMLPGTALYRARAEDKDSGLNGLVRYSIAR 1008
Query: 143 DIP--FVVDANTGDIRTNKALDYEKQQ 167
P F VDA G + N++L + Q
Sbjct: 1009 QSPSLFSVDAGLGVVYLNRSLSGAQLQ 1035
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 21/172 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA---------------S 62
Y + + E G +++ +KA DS + ++Y + N D
Sbjct: 2131 LYKGIVPENCEAGTSIVTIKAFAPDSIRDS-IKYSVFSGNEDGVFSLCSKSGEVTVKEPK 2189
Query: 63 YFNLDPATEHQGPIQDEG-GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAV 120
+ + + E Q + E G + + V + + D+ND P F+ Y+ SV EGQ +
Sbjct: 2190 FLDFEVRKEVQLIVLAESRGRKAYSKVAVFIQDLNDHPPHFEQSVYQVSVSEGQFYNHHI 2249
Query: 121 GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ATD D G N +V YS+ + F +D +G + + LDYE Y
Sbjct: 2250 VQVFATDLDSGSNGLVEYSILSGNQGNVFQMDPLSGVLTASAILDYEYTSTY 2301
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 89 NIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---PEDIP 145
+ + D+ND +P F S P + G V + A D D G+N V +S+ E++
Sbjct: 1595 KVVILDVNDHSPTFTSFPIAHVREDAAVGSLVHHITAQDPDAGRNGRVTFSILSGNENMA 1654
Query: 146 FVVDANTGDIRTNKALDYEKQQLYL 170
F++D ++G + T LDYE + ++
Sbjct: 1655 FMLDESSGFLTTASPLDYEIKSQHI 1679
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 76/184 (41%), Gaps = 32/184 (17%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
SL Y ++ G ++ V A+D+D G V Y L N +F L+ T
Sbjct: 2655 SLEYYVHIKESTPPGSPIIVVSASDRDVGSHAEVSYYLTSGN--EKQHFCLEEKTGVLSL 2712
Query: 71 ----EHQGPIQ---------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG 117
+++ I+ +E S A V + V D ND P+F +VPE
Sbjct: 2713 IKPLDYEETIKFILTVQASDEERKHFSFAIVFVNVLDDNDHAPQFMFPNLNCAVPENLPV 2772
Query: 118 LA-VGRVHATDADEGQNAVVYYSV------PEDIP-----FVVDANTGDIRTNKALDYEK 165
+ + V+A D D G + YS+ P ++P F++D TGDI + LDYE
Sbjct: 2773 FSTICSVNALDFDAGPYGDMTYSIVSPCPLPHEMPHDHNFFLIDPLTGDISAQQVLDYEN 2832
Query: 166 QQLY 169
Y
Sbjct: 2833 DNKY 2836
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 20/168 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSG-----KFGLV---EYRLLDNNTDAASYFN---L 66
Y A ++ G + +V+A D+DSG +F ++ + L N+D L
Sbjct: 1716 LYEASVKENQNPGEFVTRVEAVDRDSGINSKLQFEIMPGASFMLFQINSDTGEVVTAATL 1775
Query: 67 DPATEH----QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
D + + + D G LS T + V D ND P+ + V E Q+ V
Sbjct: 1776 DREVQEVLTLRVLVHDGGAPALSGTTVILCTVRDENDHAPQIVVPRDDIEVLENQEPGLV 1835
Query: 121 GRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEK 165
A+D D G N V Y + + D F V+ +G++ T +ALD E+
Sbjct: 1836 YTFLASDMDAGSNGAVTYHIIDGNTDEYFAVNEMSGELSTTRALDREE 1883
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 43/98 (43%), Gaps = 16/98 (16%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV-PEDIP 145
V + V D ND P F+ Y +V E G V RV ATD D G N V YS+ P
Sbjct: 274 VELCVLDENDNPPVFEESEYRAAVREDAGPGTEVCRVRATDRDLGPNGHVRYSIRSRQAP 333
Query: 146 --------------FVVDANTGDIRTNKALDYEKQQLY 169
FVV+ +G +R ++ LD E Q +
Sbjct: 334 GAGGSGRTLDDAAYFVVEELSGVVRVHRPLDREAQAWH 371
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQS-----LPYEFSVPEGQDGLAVGRVHATDADEG 131
+D+ +++ +V + V D ND +P F E +P+G +G++ A D D G
Sbjct: 1154 EDKLSQNASTSVTVHVLDENDNSPTFWHDVLFLKVQESPMPQG----VIGKITAIDRDSG 1209
Query: 132 QNA-VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQ 166
+N + Y+ + ++ F ++ NTG++ + ALD+E++
Sbjct: 1210 KNGQLSYFLLSDEKFFKMNPNTGELISWVALDHEQR 1245
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 19/111 (17%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE--GQNAVVYY 138
LS+ T+ +RV D+ND+ P F Y SV E G V V A+DADE +A + Y
Sbjct: 511 LSTEETLLLRVADLNDQPPLFSQEHYWASVSEAAAPGTMVLCVSASDADEPGTDHARLRY 570
Query: 139 SV--------PED--------IPFVVDANTGDIRTNKALDYEKQQLYLERV 173
++ PE F +D +G I T ++LD E Q+ RV
Sbjct: 571 ALLPLPALCNPETPRPPAECGPSFSIDPESGVISTTRSLDREAQEAIELRV 621
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY 137
E LS+T V+I V D+ND P F Y ++PE G +V A+DAD G V
Sbjct: 628 EPPLSATCLVSIAVDDVNDNEPVFLKQVYNATLPEHAPVGHCFLQVKASDADAGLYGFVE 687
Query: 138 Y-------SVPEDIPFVVDANTGDIRTNKALDYEK 165
Y S F +D + G I ++ D E+
Sbjct: 688 YFLYAGFQSYEAPQAFQIDPHDGRICVSQDTDRER 722
Score = 35.8 bits (81), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 71/171 (41%), Gaps = 30/171 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-----------------ATEH 72
G L + +A DKDSG GLV Y + + S F++D A
Sbjct: 983 GTALYRARAEDKDSGLNGLVRYSIARQ---SPSLFSVDAGLGVVYLNRSLSGAQLQACTL 1039
Query: 73 QGPIQDEGGLSSTATVNIRVTDI-NDKNPE--FQSLPYEFSVPEGQDGLA-VGRVHATDA 128
QD G S + + + V + +++P F+ L Y+ V E + V R+ A
Sbjct: 1040 TLVAQDLGVPSRASLLVLTVIIVRQERSPSLTFEHLVYQVEVSESLSPMTPVLRIRARPL 1099
Query: 129 DEGQNA---VVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
Q A +VY+ P + F V TG I + LDYE Q+Y RVF
Sbjct: 1100 GP-QGAPPQLVYWLEPSTDSAAFGVHPFTGWIYLRRQLDYESTQMYNFRVF 1149
>gi|301774933|ref|XP_002922889.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 1-like [Ailuropoda melanoleuca]
Length = 2838
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 86/180 (47%), Gaps = 28/180 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---------------------NN 57
Y R+ E+G ++ ++ATD D+ + YRLL+ +
Sbjct: 181 YRERVRENLEVGYEVLTIRATDGDAPSNANMRYRLLEGAGGVFEIDARSGVVRTRAAVDR 240
Query: 58 TDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QD 116
+AA+Y L A + QG ++ G LS+TATV+I V D ND P+F Y VPE
Sbjct: 241 EEAAAYQLLVEAND-QG--RNPGPLSATATVHIVVEDENDNYPQFSEKRYVVQVPEDVAV 297
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V RV ATD D+GQNA ++YS+ F + + +G + LD+E + Y R+
Sbjct: 298 NTPVLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLRI 357
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 76/159 (47%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQ-- 73
+G +++ ++A D+D+ ++ Y+L NT + LD E Q
Sbjct: 525 VGSSVLTLRARDQDANS--VITYQLTGGNTRNRFALSSQSGGGLITLALPLDYKQERQYV 582
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G S TA V I VTD N P FQS Y SV E + G ++ + ATD D G
Sbjct: 583 LAVTASDGTRSHTAQVFINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATISATDEDTG 642
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + +P F +D +TG I T LDYE Q Y
Sbjct: 643 ENARITYVLEDPVPQFRIDPDTGTIYTMTELDYEDQAAY 681
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 33/181 (18%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY------------------------RL 53
FY + +++Q+ ATD+DSG G + Y R
Sbjct: 719 FYQGSVFEDAPPSTSVLQISATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRR 778
Query: 54 LDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
LD A +NL +G LS++ + + V DIND P F+ E V E
Sbjct: 779 LDRENVAV--YNLRALAVDRG---SPAPLSASVDIQVSVLDINDNPPVFERDELELFVEE 833
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLY 169
G V R+ A D DEG NA + Y + E ++P F +D +GD+R LD+E ++ Y
Sbjct: 834 NSPVGSVVARIRANDPDEGPNAQIMYQIVEGNVPEVFQLDLLSGDLRALAELDFEVRREY 893
Query: 170 L 170
+
Sbjct: 894 M 894
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 39/176 (22%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQGPIQDE 79
+++V+ATD+D G+ + Y ++ N Y + + E+ I+ +
Sbjct: 301 VLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLRIKAQ 360
Query: 80 GG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
G ++S+ V ++V D+ND P F S P++ +V E G +V + A DAD G+N
Sbjct: 361 DGGRPPLINSSGLVLVQVLDVNDNAPIFVSSPFQAAVLENVPLGHSVLHIQAVDADAGEN 420
Query: 134 AVVYYSV--------------------PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A + Y + P D PF + ++G I LD E + Y
Sbjct: 421 ARLRYRLVDTASTAVGGGGPAPQDAASPPDFPFQIHNSSGWITVCAELDREDVEHY 476
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 37/170 (21%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPAT---------------- 70
G T+++++A D D G+ G + Y+ L D ++ YF +D AT
Sbjct: 84 GTTVIELRAHDPDEGEAGRLSYQMEALFDERSNG--YFLIDTATGAVSTARALDRETKDT 141
Query: 71 --------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
+H P + S+ + + V+D ND +P F+ Y V E + G V
Sbjct: 142 HVLKVSAVDHGSPRR-----SAATYLTVTVSDTNDHSPVFEQSEYRERVRENLEVGYEVL 196
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+ ATD D NA + Y + E F +DA +G +RT A+D E+ Y
Sbjct: 197 TIRATDGDAPSNANMRYRLLEGAGGVFEIDARSGVVRTRAAVDREEAAAY 246
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 77/187 (41%), Gaps = 28/187 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y + +G ++ + ATD+D+G+ + Y L D F +DP T
Sbjct: 614 SSHYTVSVSEDRPVGTSIATISATDEDTGENARITYVL----EDPVPQFRIDPDTGTIYT 669
Query: 71 ------EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E Q +D G S T ++ I + D ND P F Y+ SV E
Sbjct: 670 MTELDYEDQAAYTLAITARDNGIPQKSDTTSLEILILDANDNAPRFLRDFYQGSVFEDAP 729
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
+V ++ ATD D G N + Y+ D F ++ +G IRT + LD E +Y
Sbjct: 730 PSTSVLQISATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRENVAVYNL 789
Query: 172 RVFLISK 178
R + +
Sbjct: 790 RALAVDR 796
Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 72/182 (39%), Gaps = 42/182 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGG-- 81
LG +++ ++A D D+G+ + YRL+D + A P P I + G
Sbjct: 403 LGHSVLHIQAVDADAGENARLRYRLVDTASTAVGGGGPAPQDAASPPDFPFQIHNSSGWI 462
Query: 82 ---------------------------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
+SS+A+V+I V D+ND +P F YE + E
Sbjct: 463 TVCAELDREDVEHYSFGVEAVDHGSPPMSSSASVSITVLDVNDNDPVFTQPVYELRLNED 522
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQL 168
G +V + A D D N+V+ Y + + G I LDY++++
Sbjct: 523 AAVGSSVLTLRARDQD--ANSVITYQLTGGNTRNRFALSSQSGGGLITLALPLDYKQERQ 580
Query: 169 YL 170
Y+
Sbjct: 581 YV 582
>gi|297484498|ref|XP_002694357.1| PREDICTED: protocadherin-23 [Bos taurus]
gi|296478818|tpg|DAA20933.1| TPA: dachsous 2-like [Bos taurus]
Length = 3360
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 88/181 (48%), Gaps = 25/181 (13%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQG 74
F A R+ +G + + A D D+G+ G V + +L N + A F LD ++
Sbjct: 1611 FPIAHVREDAAVGSLVHHITAQDPDAGRNGRVTFSILSGNENMA--FMLDESSGFLTTAS 1668
Query: 75 PIQDE-------------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
P+ E GG LSS+ T+ I V D+ND+ P F+ YE SV E Q+ G
Sbjct: 1669 PLDYEIKSQHILTLLALDGGTPTLSSSQTLTITVLDVNDEAPVFKQHLYEASVKENQNPG 1728
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIPFV---VDANTGDIRTNKALDYEKQQLYLERVF 174
V RV A D D G N+ + + + F+ ++++TG++ T LD E Q++ RV
Sbjct: 1729 EFVTRVEAVDRDSGINSKLQFEIMPGASFMLFQINSDTGEVVTAATLDREVQEVLTLRVL 1788
Query: 175 L 175
+
Sbjct: 1789 V 1789
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 77/172 (44%), Gaps = 30/172 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD--NNTDAASYFNLDPATEHQGPI 76
Y A + +G +QVKA+D D+G +G VEY L + +A F +DP H G I
Sbjct: 656 YNATLPEHAPVGHCFLQVKASDADAGLYGFVEYFLYAGFQSYEAPQAFQIDP---HDGRI 712
Query: 77 ---------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EG 114
+D GGLS+ A V + + D+ND P F L Y S+ +
Sbjct: 713 CVSQDTDRERDPVTYDLLVKAKDGGGLSAQAFVRVELEDVNDNEPVFNPLTYVTSLSGQA 772
Query: 115 QDGLAVGRVHATDADEGQNAVVYYS-VPEDIP--FVVDANTGDIRTNKALDY 163
Q G V V ATD D G+ V Y V D+ F +D+ TG I L +
Sbjct: 773 QLGTEVINVLATDRDSGKYGTVAYELVLGDLSSFFTIDSTTGIIYLTSTLSH 824
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 75/154 (48%), Gaps = 31/154 (20%)
Query: 35 QVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQGPI--Q 77
++ A D+DSGK G + Y LL + +F ++P T HQ +
Sbjct: 1200 KITAIDRDSGKNGQLSYFLLSDE----KFFKMNPNTGELISWVALDHEQRAHHQVAVLVS 1255
Query: 78 DEGG--LSSTATVNIRVTDINDKNPEF-QSLPYE---FSVPEGQD-GLAVGRVHATDADE 130
D G S+T V++ VTDIND P F Q L + V EGQ + V V A D DE
Sbjct: 1256 DHGSPPRSATTLVHVSVTDINDNRPYFPQCLAGKELYVKVLEGQPVNMLVTTVFAKDLDE 1315
Query: 131 GQNAVVYYSVPEDIP---FVVDANTGDIRTNKAL 161
G NA V YSV + F +DAN+G+IRT + L
Sbjct: 1316 GNNAEVIYSVSSEDSSDHFKIDANSGEIRTTRVL 1349
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 71/154 (46%), Gaps = 30/154 (19%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL--------------- 82
A+D D+G G V Y ++D NTD YF ++ E G + L
Sbjct: 1840 ASDMDAGSNGAVTYHIIDGNTD--EYFAVN---EMSGELSTTRALDREEVSNFTLVILCS 1894
Query: 83 -------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNA 134
SSTA + +RV D ND +P F L Y+ SV E Q G V + + D DEG N
Sbjct: 1895 DLGSPPQSSTAQLQVRVLDDNDHSPSFPRLQYQASVREDAQVGTTVLVLSSADEDEGLNG 1954
Query: 135 VVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQ 166
YS+ + F +D G +RT++ALD E +
Sbjct: 1955 QTMYSLVHESSGAFTIDPVAGTLRTSRALDREAR 1988
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 75/175 (42%), Gaps = 30/175 (17%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI 76
L Y + +LG ++ V ATD+DSGK+G V Y L+ D +S+F +D T G I
Sbjct: 762 LTYVTSLSGQAQLGTEVINVLATDRDSGKYGTVAYELVLG--DLSSFFTIDSTT---GII 816
Query: 77 --------------------QDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
+D GGL+S A V I + EF+ Y FSV E
Sbjct: 817 YLTSTLSHLESTTLLLMVCARDGGGLTSVTNAEVTIHILQTTLAPAEFERPKYTFSVYED 876
Query: 115 -QDGLAVGRVHATDADEGQNAVVYY--SVPEDIPFVVDANTGDIRTNKALDYEKQ 166
+ VG V A ++ V Y S D F + G IRT K LD+E Q
Sbjct: 877 VPEDSPVGTVKAKESFNSSEPVFYRISSGNLDGTFSIHPWLGTIRTQKPLDHEAQ 931
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 72/161 (44%), Gaps = 29/161 (18%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------------ATEHQGPIQ 77
++QV ATD DSG GLVEY +L N + F +DP + + +Q
Sbjct: 2249 IVQVFATDLDSGSNGLVEYSILSGN--QGNVFQMDPLSGVLTASAILDYEYTSTYSLIVQ 2306
Query: 78 --DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFS--VPEGQDGLAVGRVHATDADEG 131
D+G LS T + I+VTDIND P F LP E V G V R+ D D
Sbjct: 2307 AMDKGMPRLSDTTVIKIQVTDINDNAPIF--LPSEAVEIVENSLPGTIVTRISVYDVDSN 2364
Query: 132 QNAVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLY 169
A + V E F +D NTG + + LD+E+ Y
Sbjct: 2365 P-AFTFSFVKESNSGTKFAIDRNTGVVVLVETLDFEEATKY 2404
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYY-- 138
LSS+ATV+I V D++D P F SL Y + E G + V A+D D G +A V Y
Sbjct: 2633 LSSSATVSIEVLDVDDNPPAFSSLEYYVHIKESTPPGSPIIVVSASDRDVGSHAEVSYYL 2692
Query: 139 -SVPEDIPFVVDANTGDIRTNKALDYEK 165
S E F ++ TG + K LDYE+
Sbjct: 2693 TSGNEKQHFCLEEKTGVLSLIKPLDYEE 2720
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 73/167 (43%), Gaps = 35/167 (20%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLL-----------DNNTDAASYFNLDPATEHQGPIQ--- 77
T+ V A D D+G +G + Y ++ D+N +F +DP T Q
Sbjct: 2775 TICSVNALDFDAGPYGDMTYSIVSPCPLPHEMPHDHN-----FFLIDPLTGDISAQQVLD 2829
Query: 78 --------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR 122
D+ +++ V + V I++ P F Y FS+PE +GR
Sbjct: 2830 YENDNKYCLIVQAKDKADSTASVVVWVDVEGIDEFEPIFTQDQYFFSLPEKSHVRHLIGR 2889
Query: 123 VHATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEKQQL 168
V A+DAD G + V+ YS+ PF V+ G+I ++AL K Q+
Sbjct: 2890 VEASDADAGVDGVILYSLETPSPFFSVNKTNGNIYLSRALPLIKSQV 2936
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 27/178 (15%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA------- 69
L Y A R+ ++G T++ + + D+D G G Y L+ ++ A F +DP
Sbjct: 1924 LQYQASVREDAQVGTTVLVLSSADEDEGLNGQTMYSLVHESSGA---FTIDPVAGTLRTS 1980
Query: 70 --------TEH--QGPIQD---EGGLSSTATVNIRVTDINDKNPEFQSLPYE-FSVPEGQ 115
+EH + +D +G S+T + + VTD+ND +P + P + F +
Sbjct: 1981 RALDREARSEHVLKAVARDCGVQGSRSTTVVIKVHVTDVNDNSPVLEQNPLDIFLSSQSP 2040
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
+ A+D D G N V +S P+ + ++ TG I+ + E ++L+
Sbjct: 2041 TNQTAAILRASDPDSGPNGTVTFSFAEPQSV-LSINEYTGAIQLQQIPSSEYFPIWLQ 2097
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPE 142
S+ VNI + D+ND P F E +V + G A+ R A D D G N +V YS+
Sbjct: 949 SSTEVNITIIDVNDNPPVFPKASDEVTVSQSMLPGTALYRARAEDKDSGLNGLVRYSIAR 1008
Query: 143 DIP--FVVDANTGDIRTNKALDYEKQQ 167
P F VDA G + N++L + Q
Sbjct: 1009 QSPSLFSVDAGLGVVYLNRSLSGAQLQ 1035
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 21/172 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA---------------S 62
Y + + E G +++ +KA DS + ++Y + N D
Sbjct: 2131 LYKGIVPENCEAGTSIVTIKAFAPDSIRDS-IKYSVFSGNEDGVFSLCSKSGEVTVKEPK 2189
Query: 63 YFNLDPATEHQGPIQDEG-GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAV 120
+ + + E Q + E G + + V + + D+ND P F+ Y+ SV EGQ +
Sbjct: 2190 FLDFEVRKEVQLIVLAESRGRKAYSKVAVFIQDLNDHPPHFEQSVYQVSVSEGQFYNHHI 2249
Query: 121 GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ATD D G N +V YS+ + F +D +G + + LDYE Y
Sbjct: 2250 VQVFATDLDSGSNGLVEYSILSGNQGNVFQMDPLSGVLTASAILDYEYTSTY 2301
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 89 NIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---PEDIP 145
+ + D+ND +P F S P + G V + A D D G+N V +S+ E++
Sbjct: 1595 KVVILDVNDHSPTFTSFPIAHVREDAAVGSLVHHITAQDPDAGRNGRVTFSILSGNENMA 1654
Query: 146 FVVDANTGDIRTNKALDYEKQQLYL 170
F++D ++G + T LDYE + ++
Sbjct: 1655 FMLDESSGFLTTASPLDYEIKSQHI 1679
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 76/184 (41%), Gaps = 32/184 (17%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
SL Y ++ G ++ V A+D+D G V Y L N +F L+ T
Sbjct: 2655 SLEYYVHIKESTPPGSPIIVVSASDRDVGSHAEVSYYLTSGN--EKQHFCLEEKTGVLSL 2712
Query: 71 ----EHQGPIQ---------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG 117
+++ I+ +E S A V + V D ND P+F +VPE
Sbjct: 2713 IKPLDYEETIKFILTVQASDEERKHFSFAIVFVNVLDDNDHAPQFMFPNLNCAVPENLPV 2772
Query: 118 LA-VGRVHATDADEGQNAVVYYSV------PEDIP-----FVVDANTGDIRTNKALDYEK 165
+ + V+A D D G + YS+ P ++P F++D TGDI + LDYE
Sbjct: 2773 FSTICSVNALDFDAGPYGDMTYSIVSPCPLPHEMPHDHNFFLIDPLTGDISAQQVLDYEN 2832
Query: 166 QQLY 169
Y
Sbjct: 2833 DNKY 2836
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 20/168 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSG-----KFGLV---EYRLLDNNTDAASYFN---L 66
Y A ++ G + +V+A D+DSG +F ++ + L N+D L
Sbjct: 1716 LYEASVKENQNPGEFVTRVEAVDRDSGINSKLQFEIMPGASFMLFQINSDTGEVVTAATL 1775
Query: 67 DPATEH----QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
D + + + D G LS T + V D ND P+ + V E Q+ V
Sbjct: 1776 DREVQEVLTLRVLVHDGGAPALSGTTVILCTVRDENDHAPQIVVPRDDIEVLENQEPGLV 1835
Query: 121 GRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEK 165
A+D D G N V Y + + D F V+ +G++ T +ALD E+
Sbjct: 1836 YTFLASDMDAGSNGAVTYHIIDGNTDEYFAVNEMSGELSTTRALDREE 1883
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 43/98 (43%), Gaps = 16/98 (16%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV-PEDIP 145
V + V D ND P F+ Y +V E G V RV ATD D G N V YS+ P
Sbjct: 274 VELCVLDENDNPPVFEESEYRAAVREDAGPGTEVCRVRATDRDLGPNGHVRYSIRSRQAP 333
Query: 146 --------------FVVDANTGDIRTNKALDYEKQQLY 169
FVV+ +G +R ++ LD E Q +
Sbjct: 334 GAGGSGRTLDDAAYFVVEELSGVVRVHRPLDREAQAWH 371
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQS-----LPYEFSVPEGQDGLAVGRVHATDADEG 131
+D+ +++ +V + V D ND +P F E +P+G +G++ A D D G
Sbjct: 1154 EDKLSQNASTSVTVHVLDENDNSPTFWHDVLFLKVQESPMPQG----VIGKITAIDRDSG 1209
Query: 132 QNA-VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQ 166
+N + Y+ + ++ F ++ NTG++ + ALD+E++
Sbjct: 1210 KNGQLSYFLLSDEKFFKMNPNTGELISWVALDHEQR 1245
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 19/111 (17%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE--GQNAVVYY 138
LS+ T+ +RV D+ND+ P F Y SV E G V V A+DADE +A + Y
Sbjct: 511 LSTEETLLLRVADLNDQPPLFSQEHYWASVSEAAAPGTMVLCVSASDADEPGTDHARLRY 570
Query: 139 SV--------PED--------IPFVVDANTGDIRTNKALDYEKQQLYLERV 173
++ PE F +D +G I T ++LD E Q+ RV
Sbjct: 571 ALLPLPALCNPETPRPPAECGPSFSIDPESGVISTTRSLDREAQEAIELRV 621
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY 137
E LS+T V+I V D+ND P F Y ++PE G +V A+DAD G V
Sbjct: 628 EPPLSATCLVSIAVDDVNDNEPVFLKQVYNATLPEHAPVGHCFLQVKASDADAGLYGFVE 687
Query: 138 Y-------SVPEDIPFVVDANTGDIRTNKALDYEK 165
Y S F +D + G I ++ D E+
Sbjct: 688 YFLYAGFQSYEAPQAFQIDPHDGRICVSQDTDRER 722
Score = 35.8 bits (81), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 71/171 (41%), Gaps = 30/171 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-----------------ATEH 72
G L + +A DKDSG GLV Y + + S F++D A
Sbjct: 983 GTALYRARAEDKDSGLNGLVRYSIARQ---SPSLFSVDAGLGVVYLNRSLSGAQLQACTL 1039
Query: 73 QGPIQDEGGLSSTATVNIRVTDI-NDKNPE--FQSLPYEFSVPEGQDGLA-VGRVHATDA 128
QD G S + + + V + +++P F+ L Y+ V E + V R+ A
Sbjct: 1040 TLVAQDLGVPSRASLLVLTVIIVRQERSPSLTFEHLVYQVEVSESLSPMTPVLRIRARPL 1099
Query: 129 DEGQNA---VVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
Q A +VY+ P + F V TG I + LDYE Q+Y RVF
Sbjct: 1100 GP-QGAPPQLVYWLEPSTDSAAFGVHPFTGWIYLRRQLDYESTQMYNFRVF 1149
>gi|344258353|gb|EGW14457.1| Cadherin EGF LAG seven-pass G-type receptor 1 [Cricetulus griseus]
Length = 979
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 85/180 (47%), Gaps = 28/180 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y R+ E+G ++ ++ATD D+ + YRLL+ A F +D
Sbjct: 132 YRERIRENLEVGYEVLTIRATDGDAPSNANMRYRLLEG---AGGVFEIDARSGVVRTRAV 188
Query: 69 -----ATEHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QD 116
A E+Q ++ + G LS++ATV+I V D ND P+F Y VPE
Sbjct: 189 VDREEAAEYQLLVEANDQGRNPGPLSASATVHIVVEDENDNYPQFSEKRYVVQVPEDVAV 248
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
AV RV ATD D+GQNA ++YS+ F + + +G + LD+E + Y R+
Sbjct: 249 NTAVLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLRI 308
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 76/159 (47%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQ-- 73
+G +++ ++A D+D+ ++ Y+L NT + LD E Q
Sbjct: 476 VGSSVLTLRARDRDANS--VITYQLTGGNTRNRFALSSQSGGGLITLALPLDYKQERQYV 533
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G S TA V I VTD N P FQS Y SV E + G ++ + ATD D G
Sbjct: 534 LAVTASDGTRSHTAQVFINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATISATDEDTG 593
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + +P F +D +TG I T LDYE Q Y
Sbjct: 594 ENARITYVLEDPVPQFRIDPDTGTIYTMTELDYEDQAAY 632
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 79/181 (43%), Gaps = 33/181 (18%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY------------------------RL 53
FY + +++QV ATD+DSG G + Y R
Sbjct: 670 FYQGSVFEDAPPSTSVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRR 729
Query: 54 LDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
LD A +NL +G + LS++ + + V DIND P F+ E V E
Sbjct: 730 LDRENVAV--YNLHALAVDRG---NPNPLSASVEIQVTVLDINDNPPVFEKDELELFVEE 784
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLY 169
G V R+ A D DEG NA + Y + E ++P F +D +GD+R LD+E Q+ Y
Sbjct: 785 NSPVGSVVARIKANDPDEGPNAQIMYQIVEGNVPEVFQLDLLSGDLRALVELDFEVQRDY 844
Query: 170 L 170
+
Sbjct: 845 M 845
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 80/180 (44%), Gaps = 39/180 (21%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQGP 75
+ +++V+ATD+D G+ + Y ++ N Y + + E+
Sbjct: 248 VNTAVLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLR 307
Query: 76 IQDEGG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
I+ + G ++S+ V+++V D+ND P F S P++ +V E G +V + A DAD
Sbjct: 308 IKAQDGGRPPLINSSGLVSVQVLDVNDNAPIFVSSPFQAAVLENVPLGHSVLHIQAVDAD 367
Query: 130 EGQNAVVYYSV--------------PE------DIPFVVDANTGDIRTNKALDYEKQQLY 169
G+NA + Y + PE D PF + ++G I LD E+ + Y
Sbjct: 368 AGENARLQYRLVDTASPILGGSSVDPENPASAPDFPFQIHNSSGWITVCAELDREEIEHY 427
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 74/178 (41%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y + +G ++ + ATD+D+G+ + Y L D F +DP T
Sbjct: 565 SSHYTVSVSEDRPVGTSIATISATDEDTGENARITYVL----EDPVPQFRIDPDTGTIYT 620
Query: 71 ------EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E Q QD G S T ++ I + D ND P F Y+ SV E
Sbjct: 621 MTELDYEDQAAYTLAITAQDNGIPQKSDTTSLEILILDANDNVPRFLRDFYQGSVFEDAP 680
Query: 116 DGLAVGRVHATDADEGQNAVVYYS----VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V +V ATD D G N + Y+ D F ++ +G IRT + LD E +Y
Sbjct: 681 PSTSVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRENVAVY 738
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 37/170 (21%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPAT---------------- 70
G +++++A D D G+ G + Y+ L D ++ YF +D T
Sbjct: 35 GTAVIELRAHDPDEGEAGRLSYQMEALFDERSNG--YFLIDSVTGAVTTARALDRETKDT 92
Query: 71 --------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
+H P + S+ + + V+D ND +P F+ Y + E + G V
Sbjct: 93 HVLKVSAVDHGSPRR-----SAATYLTVTVSDTNDHSPVFEQSEYRERIRENLEVGYEVL 147
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+ ATD D NA + Y + E F +DA +G +RT +D E+ Y
Sbjct: 148 TIRATDGDAPSNANMRYRLLEGAGGVFEIDARSGVVRTRAVVDREEAAEY 197
Score = 42.4 bits (98), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 78/182 (42%), Gaps = 42/182 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGG-- 81
LG +++ ++A D D+G+ ++YRL+D + ++DP P I + G
Sbjct: 354 LGHSVLHIQAVDADAGENARLQYRLVDTASPILGGSSVDPENPASAPDFPFQIHNSSGWI 413
Query: 82 ---------------------------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
+SS+A+V+I V D+ND +P F YE + E
Sbjct: 414 TVCAELDREEIEHYSFGVEAVDHGSPPMSSSASVSITVLDVNDNDPMFTQPVYELRLNED 473
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGD--IRTNKALDYEKQQL 168
G +V + A D D N+V+ Y + F + + +G I LDY++++
Sbjct: 474 AAVGSSVLTLRARDRD--ANSVITYQLTGGNTRNRFALSSQSGGGLITLALPLDYKQERQ 531
Query: 169 YL 170
Y+
Sbjct: 532 YV 533
>gi|134026246|gb|AAI36080.1| pcdhac2 protein [Xenopus (Silurana) tropicalis]
Length = 967
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 70/165 (42%), Gaps = 38/165 (23%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQGPIQD-- 78
A D D G + Y+L DN YF LD T Q P+
Sbjct: 153 AQDPDLGTNSIQTYKLSDN-----EYFALDLKTFNGNSKLIEIVLKKALDREQKPLHQLL 207
Query: 79 ----EGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
+GG S TA V++RV D ND P F Y+ SVPE G V +++A D DE
Sbjct: 208 LTAIDGGTPAKSGTAQVSVRVMDTNDNTPYFDKSTYKASVPENSPAGTLVIKLNAIDPDE 267
Query: 131 GQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
G N V YS P F +D G+IR N A+DYEK Y
Sbjct: 268 GSNGDVLYSFSSYTPQKVRQLFTIDPQKGEIRINGAVDYEKASEY 312
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 77/175 (44%), Gaps = 32/175 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL-----------------DNNTDAA 61
Y + + GV+L+ VKATD DS + V Y LL DN T A
Sbjct: 455 YSIYIMENNAPGVSLISVKATDLDSNENSFVSYSLLRGDIEGLPVSSYVSIKSDNGTIYA 514
Query: 62 SY-FNLDPATEHQGPI--QDEG--GLSSTATVNIRVTDINDKNPEF-------QSLPYEF 109
+ F+ + E + QD G LSS+ATVNI + D ND P S E
Sbjct: 515 VHSFDYEKLREFHFVVQAQDAGNPSLSSSATVNIFIMDQNDHAPTILFPSTANGSASIEM 574
Query: 110 SVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKAL 161
G V +V A D D GQNA ++Y++ + F V+ + G+IRT + +
Sbjct: 575 IPRSANVGYLVAKVIAIDLDSGQNAWLFYNLSQASDPKLFQVELHMGEIRTTRKV 629
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 79/178 (44%), Gaps = 38/178 (21%)
Query: 19 YGAMARDKH-ELGVTLMQVKATDKDSGKFGLVEYRLLDN---------NT---------- 58
Y +A + H E V LM V TD+DSG V R+ N NT
Sbjct: 352 YSPVAENSHDETVVALMSV--TDQDSGLNKQVSLRIQPNIPFKLTSFKNTYKLVTVGKLD 409
Query: 59 -DAASYFNLD-PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ- 115
+ +S +N+ AT+ P LS+ T+ + V+D+ND P F+ Y + E
Sbjct: 410 REKSSSYNITVTATDSGTP-----PLSTQKTLYVEVSDLNDNPPTFEEKSYSIYIMENNA 464
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV----PEDIP----FVVDANTGDIRTNKALDYEK 165
G+++ V ATD D +N+ V YS+ E +P + ++ G I + DYEK
Sbjct: 465 PGVSLISVKATDLDSNENSFVSYSLLRGDIEGLPVSSYVSIKSDNGTIYAVHSFDYEK 522
>gi|344241468|gb|EGV97571.1| Cadherin-18 [Cricetulus griseus]
Length = 691
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 53/98 (54%), Gaps = 8/98 (8%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYY 138
GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG++ A DAD G NA + Y
Sbjct: 147 GGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVGKIKANDADTGSNADMTY 206
Query: 139 SVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
S+ I D G + K L+YEK++ Y
Sbjct: 207 SITNGDGIGVFSISTDKDTREGILSLKKPLNYEKKKSY 244
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 254 HLDFRFSHLGPFKD------ATMLKIIVGDV-DEPPHFSMPSYVMDVYENAKVGTIVGTV 306
Query: 124 HATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D + V Y+ S ED F +DANTG I+T+K LD E+ Y
Sbjct: 307 LAQDPDSANSLVRYFINRSAEEDRFFNIDANTGTIKTSKVLDREETPWY 355
>gi|269914130|ref|NP_001019301.2| protocadherin beta-13 precursor [Pan troglodytes]
Length = 798
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 19/171 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY + +G +++V ATD D+G G + Y L + + F ++P T
Sbjct: 247 FYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKK 306
Query: 71 ----------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
E +D G S TV I+V D+ND PE + +PE V
Sbjct: 307 QLDFEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVV 366
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDA--NTGDIRTNKALDYEKQQLY 169
+D D G+N + S+ ED+PF++ + N + T + LD E + Y
Sbjct: 367 ALFSVSDLDSGENGKISCSIQEDLPFLLKSAENFYTLLTERPLDRESRAEY 417
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
S TA V I + D+ND PEF+ Y + E G V +V ATD D G N + YS+
Sbjct: 224 SGTAQVYIEILDVNDNAPEFEQPFYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLF 283
Query: 141 --PEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
E+I F ++ TG+I K LD+EK Q Y
Sbjct: 284 QASEEIGKTFKINPLTGEIELKKQLDFEKLQSY 316
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L + + + + D+ND P F Y V E L +G V ATD D G NA V YS+
Sbjct: 431 LKTQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSL 490
Query: 141 --PED--IPFV----VDANTGDIRTNKALDYEKQQLYLERV 173
P+D +P ++A+ G + ++LDYE Q + RV
Sbjct: 491 LPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFEFRV 531
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 80/200 (40%), Gaps = 49/200 (24%)
Query: 9 ALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL-------------D 55
A TS +LF R+ + + + V ATD+DSG V Y LL
Sbjct: 450 AFTQTSYTLF----VRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLTSLVS 505
Query: 56 NNTDAASYFNLDP--------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNP- 100
N D F L A++H P LSS A V + V D ND +P
Sbjct: 506 INADNGHLFALRSLDYEALQGFEFRVGASDHGSP-----ALSSEALVRVLVLDANDNSPF 560
Query: 101 -----EFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDAN 151
+ S P VP + G V +V A D D GQNA + Y + E F V A+
Sbjct: 561 VLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAH 620
Query: 152 TGDIRTNKAL---DYEKQQL 168
G++RT + L D K +L
Sbjct: 621 NGEVRTARLLSERDAAKHRL 640
>gi|62510888|sp|Q5DRD6.1|PCDBD_PANTR RecName: Full=Protocadherin beta-13; Short=PCDH-beta-13; Flags:
Precursor
Length = 798
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 19/171 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY + +G +++V ATD D+G G + Y L + + F ++P T
Sbjct: 247 FYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIELKK 306
Query: 71 ----------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
E +D G S TV I+V D+ND PE + +PE V
Sbjct: 307 QLDFEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVV 366
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDA--NTGDIRTNKALDYEKQQLY 169
+D D G+N + S+ ED+PF++ + N + T + LD E + Y
Sbjct: 367 ALFSVSDLDSGENGKISCSIQEDLPFLLKSAENFYTLLTERPLDRESRAEY 417
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
S TA V I V D+ND PEF+ Y + E G V +V ATD D G N + YS+
Sbjct: 224 SGTAQVYIEVLDVNDNAPEFEQPFYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLF 283
Query: 141 --PEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
E+I F ++ TG+I K LD+EK Q Y
Sbjct: 284 QASEEIGKTFKINPLTGEIELKKQLDFEKLQSY 316
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L + + + + D+ND P F Y V E L +G V ATD D G NA V YS+
Sbjct: 431 LKTQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSL 490
Query: 141 --PED--IPFV----VDANTGDIRTNKALDYEKQQLYLERV 173
P+D +P ++A+ G + ++LDYE Q + RV
Sbjct: 491 LPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFEFRV 531
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 80/200 (40%), Gaps = 49/200 (24%)
Query: 9 ALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL-------------D 55
A TS +LF R+ + + + V ATD+DSG V Y LL
Sbjct: 450 AFTQTSYTLF----VRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLTSLVS 505
Query: 56 NNTDAASYFNLDP--------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNP- 100
N D F L A++H P LSS A V + V D ND +P
Sbjct: 506 INADNGHLFALRSLDYEALQGFEFRVGASDHGSP-----ALSSEALVRVLVLDANDNSPF 560
Query: 101 -----EFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDAN 151
+ S P VP + G V +V A D D GQNA + Y + E F V A+
Sbjct: 561 VLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAH 620
Query: 152 TGDIRTNKAL---DYEKQQL 168
G++RT + L D K +L
Sbjct: 621 NGEVRTARLLSERDAAKHRL 640
>gi|432093061|gb|ELK25351.1| Protocadherin-23 [Myotis davidii]
Length = 2601
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 78/162 (48%), Gaps = 31/162 (19%)
Query: 35 QVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ------ 77
++ A D+DSGK G + Y LL + +F ++P T EHQ Q
Sbjct: 596 KITAIDRDSGKNGQLSYFLLSD----GKFFKMNPHTGELISWVALDHEHQVHHQVTVLVT 651
Query: 78 DEGGLSSTAT--VNIRVTDINDKNPEF-QSLP---YEFSVPEGQD-GLAVGRVHATDADE 130
D G A+ V + VTDIND P F Q LP V EGQ + V V A D DE
Sbjct: 652 DHGSPPRNASMVVYVAVTDINDNRPYFPQCLPGKELHIKVLEGQPVNMLVTTVFAKDFDE 711
Query: 131 GQNAVVYYSVP-EDIP--FVVDANTGDIRTNKALDYEKQQLY 169
G NA V YSV ED F +DAN+G+IRT L Y+ + Y
Sbjct: 712 GNNAEVIYSVSSEDRSDHFKIDANSGEIRTTTVLLYDYRPSY 753
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 71/155 (45%), Gaps = 30/155 (19%)
Query: 36 VKATDKDSGKFGLVEYRLLD--NNTDAASYFNLDPATEHQGPI----------------- 76
VKA+D D+G +GLVEY L D + +A F +DP H G I
Sbjct: 69 VKASDADAGLYGLVEYSLYDGFQSYEAPRAFQIDP---HDGQICVSQDIDRERDPATYDL 125
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEG 131
+D GGLS+ A V + V D+ND P F Y S+ + Q G + V ATD D G
Sbjct: 126 LVKARDGGGLSAQAFVRVDVEDVNDNEPVFNPPTYVLSISGQTQPGTEIINVLATDRDSG 185
Query: 132 QNAVVYYS-VPEDIP--FVVDANTGDIRTNKALDY 163
V Y +P D+ F +D+ TG I L +
Sbjct: 186 VYGTVAYELIPSDLSSLFTIDSTTGIIYLTSTLGH 220
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 87/181 (48%), Gaps = 25/181 (13%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA-------- 69
F A ++ +G + V A D D G+ G V Y +L N + A F LD +
Sbjct: 1007 FPIAHVKEDATVGSLVHHVTAHDPDEGRNGRVTYSILSGNENMA--FMLDESSGLLTTTC 1064
Query: 70 -------TEHQGPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
T+H + D+G LSS+ T+ + V D+ND+ P F+ YE SV E Q+ G
Sbjct: 1065 SLDYEMKTQHVLTLLALDDGVPALSSSQTLTVFVLDVNDEAPVFKQHLYEASVKENQNPG 1124
Query: 118 LAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
V RV A D D G N+ + + + F ++A+TG++ T LD E Q++ RV
Sbjct: 1125 EFVTRVEAMDRDSGINSKLQFEIMLGASSGLFEINADTGEVVTATTLDREVQEVLTLRVL 1184
Query: 175 L 175
+
Sbjct: 1185 V 1185
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 25/177 (14%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA-----TE 71
L Y + R+ ++G ++ + A DKD G G EY L D +AA F +DP T
Sbjct: 1320 LQYQSFVREDADVGTVVLVLSAVDKDEGLNGQTEYFLTD---EAAGAFTIDPVAGILRTG 1376
Query: 72 H------------QGPIQD---EGGLSSTATVNIRVTDINDKNPEFQSLPYE-FSVPEGQ 115
H + +D +G S+T T+ + VTD+ND +P ++ P + F P+
Sbjct: 1377 HALNREARSQYIFRAVARDCSIQGSRSTTVTIKVHVTDVNDNDPVWEQNPLDIFLSPQSP 1436
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLE 171
+ A D D G N V +S E F ++ TG+I + E ++L+
Sbjct: 1437 INQTTAILRANDPDLGPNGTVIFSFAETQSVFSINKYTGEIHLQQNPSSEHFPIWLQ 1493
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 76/173 (43%), Gaps = 31/173 (17%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL-- 82
+ E GV + V A D D+G G V+Y ++D NTD YF+++ E G + L
Sbjct: 1224 ENQEPGV-VYTVLAFDMDTGNNGAVKYHIIDGNTD--EYFSIN---ETSGELSTTHALDR 1277
Query: 83 --------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
SS + +RV D ND +P F L Y+ V E D G V
Sbjct: 1278 EQVNNFALVILCSDLGDPPRSSLVQLQVRVLDDNDHSPSFPMLQYQSFVREDADVGTVVL 1337
Query: 122 RVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLER 172
+ A D DEG N Y + ++ F +D G +RT AL+ E + Y+ R
Sbjct: 1338 VLSAVDKDEGLNGQTEYFLTDEAAGAFTIDPVAGILRTGHALNREARSQYIFR 1390
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 64/124 (51%), Gaps = 12/124 (9%)
Query: 49 VEYRLLDNNTD---AASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSL 105
V Y +L +N D +AS+ + A++H P L+STATV+I V D+ND P F SL
Sbjct: 1972 VGYLVLLHNLDREASASHKLVILASDHGCP-----PLTSTATVSIEVLDVNDNPPTFHSL 2026
Query: 106 PYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL 161
Y V E G + V A+D D G +A + Y + E F ++ TG + K L
Sbjct: 2027 TYHAHVKESTPLGSHITVVSASDRDVGLHAEIIYHIISGNEKGHFYLEERTGVLYLTKPL 2086
Query: 162 DYEK 165
DYE+
Sbjct: 2087 DYEE 2090
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 79/175 (45%), Gaps = 29/175 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
+G+ A L M+V A D DSG GL+EY LL + A F +D
Sbjct: 1605 WGSSAIWGWGLLPCFMKVSAADLDSGLHGLIEYSLLAG--EQAQLFQIDARSGVITANGI 1662
Query: 69 -----ATEHQGPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYE-FSVPEGQ-DG 117
+ + +Q D+G LS T+ V I+VTD+ND P F LP E +PE G
Sbjct: 1663 LDYEFTSSYSLIVQATDKGMPRLSGTSVVKIQVTDVNDNAPAF--LPLEAVEIPENALPG 1720
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ V R+ D D A ++ + P F +D +TG + K L++E+ Y
Sbjct: 1721 VIVTRISVHDVDLNP-AFIFSFAKQSNPGTKFAIDQHTGVVVLVKTLNFEEATEY 1774
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---PEDIPF 146
+ + D+ND +P F S P + G V V A D DEG+N V YS+ E++ F
Sbjct: 992 VVILDVNDHSPTFMSFPIAHVKEDATVGSLVHHVTAHDPDEGRNGRVTYSILSGNENMAF 1051
Query: 147 VVDANTGDIRTNKALDYEKQQLYL 170
++D ++G + T +LDYE + ++
Sbjct: 1052 MLDESSGLLTTTCSLDYEMKTQHV 1075
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G ++ V ATD+DSG +G V Y L+ +D +S F +D T G I
Sbjct: 171 GTEIINVLATDRDSGVYGTVAYELIP--SDLSSLFTIDSTT---GIIYLTSTLGHLESTT 225
Query: 77 -------QDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHAT 126
+D GGL+S A V I + EF+ Y FSV E + VG V A
Sbjct: 226 LLLMVCARDGGGLTSVVNADVTIHILQTTLAPAEFERPKYTFSVYEDVPEDSPVGIVKAK 285
Query: 127 DADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERV 173
++ + Y D+ F + G IRT K LD+E Q + + V
Sbjct: 286 ESLNSSEPIFYRISSGDLHGTFSIHPWLGTIRTRKPLDHETQPMVVLTV 334
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 74/189 (39%), Gaps = 28/189 (14%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN------- 65
T SL Y A ++ LG + V A+D+D G + Y ++ N Y
Sbjct: 2022 TFHSLTYHAHVKESTPLGSHITVVSASDRDVGLHAEIIYHIISGNEKGHFYLEERTGVLY 2081
Query: 66 LDPATEHQGPIQ---------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
L +++ I+ +E S A V + + D ND P F VPE
Sbjct: 2082 LTKPLDYEETIKFTLTIQASDEEKKHFSFAVVLVSILDDNDHEPLFLFPRLNCVVPENLP 2141
Query: 117 GLA-VGRVHATDADEGQNAVVYYSV-----------PEDIPFVVDANTGDIRTNKALDYE 164
+ + V+A D D G + YS+ P+ PF++D TGDI + LDYE
Sbjct: 2142 VFSTICSVNALDFDAGPYGELTYSIVSPCPATRGAPPDHDPFLIDPLTGDIYAKQVLDYE 2201
Query: 165 KQQLYLERV 173
Y V
Sbjct: 2202 NDNRYCLTV 2210
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 20/168 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-----ATEH 72
Y A ++ G + +V+A D+DSG +++ ++ + N D AT
Sbjct: 1112 LYEASVKENQNPGEFVTRVEAMDRDSGINSKLQFEIMLGASSGLFEINADTGEVVTATTL 1171
Query: 73 QGPIQD---------EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
+Q+ +GG LS T TV V D ND P+ ++ V E Q+ V
Sbjct: 1172 DREVQEVLTLRVLVRDGGVPSLSGTTTVLCTVEDENDHAPKIIVPAHDIEVLENQEPGVV 1231
Query: 121 GRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEK 165
V A D D G N V Y + + D F ++ +G++ T ALD E+
Sbjct: 1232 YTVLAFDMDTGNNGAVKYHIIDGNTDEYFSINETSGELSTTHALDREQ 1279
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
VN+ V D+ND +P F E V + G A+ R A D D G N V YS+ P
Sbjct: 349 VNVTVIDVNDNHPVFPKASDEVKVSQITLPGTALYRARAEDKDSGWNGFVRYSIASQNPG 408
Query: 146 -FVVDANTGDIRTNKAL 161
F +D+ G + N +L
Sbjct: 409 IFSIDSGLGVVYLNASL 425
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 64 FNLDPATEHQGPIQDEGGLSST-ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVG 121
N + ATE++ IQ + T + +RV D+ND P F Y+ ++PE G +V
Sbjct: 1766 LNFEEATEYELLIQISDSVHHTEGALIVRVLDVNDNPPVFSQDSYQVTIPESVPAGYSVL 1825
Query: 122 RVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKAL 161
V ATD++ ++ + Y + F +D G I T +
Sbjct: 1826 TVAATDSESNEH-ISYRIISSSTEFSIDPRNGTIFTTNPI 1864
Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 10/88 (11%)
Query: 85 TATVNIRVTDINDKNPEFQS----LPYEFS-VPEGQDGLAVGRVHATDADEGQNAVVYYS 139
+ +V + V D ND +P F L E S +P+G +G++ A D D G+N + Y
Sbjct: 558 STSVIVHVLDENDNSPTFLHDVLFLKVEESPLPQG----VIGKITAIDRDSGKNGQLSYF 613
Query: 140 VPEDIPFV-VDANTGDIRTNKALDYEKQ 166
+ D F ++ +TG++ + ALD+E Q
Sbjct: 614 LLSDGKFFKMNPHTGELISWVALDHEHQ 641
Score = 36.2 bits (82), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDA-DEGQNAVVYYS 139
L A +NI+V ++ +PE + + + + D + Q+ +++S
Sbjct: 767 LQGQAVINIQVIPLSKGRAAISQNIRHLVIPENLKPAKIMSLIKSPDHFQQHQDGKLHFS 826
Query: 140 VP---EDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ +D PF +D++TGD+ +K LDYE YL RV
Sbjct: 827 IAADDKDGPFEIDSSTGDLFLSKELDYEMTSHYLFRV 863
>gi|402872875|ref|XP_003919499.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-8 [Papio anubis]
Length = 715
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------E 71
+G +++V ATD D+G G + Y L + + + F +D T E
Sbjct: 172 IGFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDSLTGEIELKKQLDFEKLQSYE 231
Query: 72 HQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEG 131
+D GG S T+ I+V D+ND PE + +PE V +D D G
Sbjct: 232 VNIEARDAGGFSGKCTILIQVMDVNDHAPEVTMSAFTSPIPENAPETVVALFSVSDLDSG 291
Query: 132 QNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
+N + + ED+PF++ ++ G+ + T K LD E + Y
Sbjct: 292 ENGKINCFIQEDLPFLLKSSVGNFYTLLTEKPLDRESRAEY 332
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L++ + + V+D+ND P F + Y V E L +G V ATD D NA V YS+
Sbjct: 346 LTTHLNMTVLVSDVNDNVPAFSEISYTLFVRENNSPALHIGSVSATDRDSSTNAQVTYSL 405
Query: 141 --PED--IPF----VVDANTGDIRTNKALDYEKQQLYLERV 173
P+D +P ++A+ G + ++LDYE Q + RV
Sbjct: 406 LPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQEFEFRV 446
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 78/187 (41%), Gaps = 35/187 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL---DNNTDAASYFNLDPATEHQGP 75
Y R+ + + + V ATD+DS V Y LL D + +S +++ H
Sbjct: 371 YTLFVRENNSPALHIGSVSATDRDSSTNAQVTYSLLPPQDPHLPLSSLVSINADNGHLFA 430
Query: 76 IQ-----------------DEG--GLSSTATVNIRVTDINDKNP------EFQSLPYEFS 110
++ D G LSS A V + V D ND +P + S P
Sbjct: 431 LRSLDYEALQEFEFRVRAADRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTEL 490
Query: 111 VPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL---DY 163
VP + G V +V A D D GQNA + Y + E F V A+ G++RT + L D
Sbjct: 491 VPRAAEPGYVVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDA 550
Query: 164 EKQQLYL 170
K +L +
Sbjct: 551 AKHRLVV 557
>gi|156717266|ref|NP_001096175.1| protocadherin 1 [Xenopus (Silurana) tropicalis]
gi|134026144|gb|AAI35900.1| pcdh1 protein [Xenopus (Silurana) tropicalis]
Length = 1047
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 82/165 (49%), Gaps = 28/165 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
+M+V ATD DSG + Y +L + + A F+++P + G I+
Sbjct: 533 VMEVSATDADSGPNSQLHYSILPDPS-ARGIFSINPDS---GQIRVNTVLDREQREHYDF 588
Query: 78 -----DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
D+G L TA+V I V D ND +P+F Y FSV E L+ VG V DAD
Sbjct: 589 HVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPVGMVTVIDAD 648
Query: 130 EGQNAVVYYSV-PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
+G+NA ++ SV PE FV+ TG I ++ + D E Q Y R+
Sbjct: 649 KGENAHIHLSVEPESGEFVIQNGTGTILSSISFDREHQSTYTFRL 693
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 5/102 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
LSST ++ ++VTD+ND P F E PE D V V ATDAD G N+ ++YS+
Sbjct: 494 LSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGPNSQLHYSI 553
Query: 141 PEDIP----FVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
D F ++ ++G IR N LD E+++ Y V + K
Sbjct: 554 LPDPSARGIFSINPDSGQIRVNTVLDREQREHYDFHVVAVDK 595
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 80/194 (41%), Gaps = 41/194 (21%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---E 71
+ + Y A + +G +++QVKA D D G ++Y + +LD +T
Sbjct: 289 EKMAYEAELPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQASDTVRRLLHLDRSTGLIT 348
Query: 72 HQGPI--------------QDEGGLSSTA--TVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
QGPI +D+G TA V I + D ND P + F + Q
Sbjct: 349 VQGPIDREDVGTLKFSVVAKDKGANPKTARTQVTITIRDTNDNKPVIEI--RGFGLVTHQ 406
Query: 116 DGLA-----------VGRVHATDADEGQNAVVYYSVPEDIPFVVD--ANTGD-------I 155
G+A V V +D DEG NA V V D+PF + ++TG +
Sbjct: 407 GGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGSDSKKKYFL 466
Query: 156 RTNKALDYEKQQLY 169
+T ALDYE + Y
Sbjct: 467 QTTTALDYESVKEY 480
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 29/175 (16%)
Query: 5 PIPSALE-------MTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN 57
PIP+A + ++S L G A+D L V A D+D + L+ +LD
Sbjct: 196 PIPAATDRDSGVNGVSSYELIVGPEAQDLFGLQV------AEDQDEKQPQLIVMGMLDRE 249
Query: 58 TDAASYFNLDPATEHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
+ + +QD G +S+A + I + D ND P+F+ + YE +PE
Sbjct: 250 QRDSYDLTIK--------VQDGGTPARASSALLRISILDTNDNAPKFEKMAYEAELPENS 301
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPEDIPFV-----VDANTGDIRTNKALDYE 164
G +V +V A D+D+G NA + YS + V +D +TG I +D E
Sbjct: 302 PMGHSVLQVKANDSDQGVNAEIDYSFHQASDTVRRLLHLDRSTGLITVQGPIDRE 356
Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Query: 83 SSTATVNIRVTDINDKNPEF---QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYS 139
SS V I V D ND P ++ Y++ P+ G V V A D D G NA + YS
Sbjct: 704 SSYVGVTINVLDENDNAPVIVVPSNISYKYLTPQTHPGTPVNWVRAEDMDTGINAELDYS 763
Query: 140 VPEDIP---FVVDANTGDIRTNKAL 161
+ P F + N G++ KA+
Sbjct: 764 IASGNPFELFQISHNNGEVTLEKAI 788
>gi|301621400|ref|XP_002940043.1| PREDICTED: hypothetical protein LOC100490327 [Xenopus (Silurana)
tropicalis]
Length = 4900
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 96/197 (48%), Gaps = 35/197 (17%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT---DAASYFNLDPAT- 70
+ L Y A + ++ G ++ V+ATDKD+ + + Y +++NNT ++SY +++P T
Sbjct: 4549 EKLMYVAYVLENNQPGASIYSVQATDKDAAENAKLMYSIINNNTMEGPSSSYISINPVTG 4608
Query: 71 ------------EHQGPI----QDEG--GLSSTATVNIRVTDINDKNPEFQ--------S 104
E + I +D G L+S+ T+ I + D ND +P
Sbjct: 4609 VIYAQRSFDYEQEREFKILIMAKDSGSPSLNSSTTLRICIIDQNDNSPNILYPSPDVGGP 4668
Query: 105 LPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKAL 161
YE + G V +V A DAD G NA + Y + +D F++D TG+IRT++
Sbjct: 4669 AAYEMVPFSSEQGTLVTKVVAVDADSGHNAWLSYRLLQDSETSHFIIDQYTGEIRTSRV- 4727
Query: 162 DYEKQQLYLERVFLISK 178
++++ + +V +I K
Sbjct: 4728 -FQERDVLRHKVVVIVK 4743
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 35/193 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD---AASYFNLDPAT----- 70
Y A + ++ G ++ ++ ATDKDS + V Y + NT+ +ASY +++P T
Sbjct: 2918 YIAYVLENNQPGASIYKILATDKDSEENSKVTYSITSINTEELSSASYISINPVTGVIYA 2977
Query: 71 ----------EHQGPI--QDEG--GLSSTATVNIRVTDINDKNPEFQ--------SLPYE 108
E Q I +D G L+S+A V I V D ND +P S YE
Sbjct: 2978 QRSFDYEQDREFQIQIMAKDNGSPSLNSSANVRICVIDQNDNSPTILYPQSDGGGSSVYE 3037
Query: 109 FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEK 165
+ G V +V A DAD G NA + Y +D F++D TG+IRT++ +++
Sbjct: 3038 LVPFSSEQGTLVTKVVAVDADSGHNAWLSYHFLQDSETSHFIIDQYTGEIRTSRV--FQE 3095
Query: 166 QQLYLERVFLISK 178
+ + +V +I K
Sbjct: 3096 RDVLRHKVVVIVK 3108
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 34/192 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA---ASYFNLDPAT----- 70
Y + +E G ++ ++A+DKDS + + Y + +N + ASY +++P T
Sbjct: 3735 YIVYISENNEPGASIYSIQASDKDSEENAKLVYSSITSNREEPSLASYISINPVTGVIYA 3794
Query: 71 ----------EHQGPI--QDEG--GLSSTATVNIRVTDINDKNP-------EFQSLPYEF 109
E Q I +D G L+ST+ V I V D ND +P + S YE
Sbjct: 3795 QRSIDYEQSKEFQIQIMAKDSGYPSLNSTSFVRICVIDQNDNSPIILYPSADVGSAAYEM 3854
Query: 110 SVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQ 166
+ G V +V A DAD G NA + Y +D FV+D TG+IRT++ ++++
Sbjct: 3855 VPFSSEQGTLVTKVVAVDADSGHNAWLSYHFLQDSETTYFVIDQYTGEIRTSRV--FQER 3912
Query: 167 QLYLERVFLISK 178
+ +V +I K
Sbjct: 3913 DILRHKVVVIVK 3924
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 37/198 (18%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD---AASYFNLDPAT- 70
+ L Y A + ++ G ++ ++A DKD+ + + Y ++ +NT+ +ASY +++P T
Sbjct: 1273 EKLTYVAYVPENNQPGASIYSIQAIDKDTEENAKLTYSIISSNTEEPSSASYISINPVTG 1332
Query: 71 ------------EHQGPIQ----DEGGLSSTATVNIRVTDINDKNPEFQSL--------- 105
E + IQ D G S ++ N+R+ I D+N F ++
Sbjct: 1333 IIYAQRSFDYEQEREFQIQIMAKDHGSPSLNSSTNLRIC-IVDQNDNFPTILYPSGDVGG 1391
Query: 106 --PYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKA 160
YE + G V +V A D D G NA + Y +D F++D TG+IRT++
Sbjct: 1392 SAAYEMVPFSSEQGTLVTKVVAVDIDSGHNAWLSYHFLQDAETSHFIIDQYTGEIRTSRV 1451
Query: 161 LDYEKQQLYLERVFLISK 178
++++ + +V +I K
Sbjct: 1452 --FQERDVLRHKVVVIVK 1467
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT---DAASYFNLDPAT----- 70
Y A + ++ G ++ ++A D DS + + Y +++ NT +SY +++P T
Sbjct: 2078 YLAYIPENNQPGASIYSIQAIDNDSEENAKLIYSIINMNTGEPSPSSYISINPVTGVIYA 2137
Query: 71 ----------EHQGPI--QDEGG--LSSTATVNIRVTDINDKNPEFQ--------SLPYE 108
E Q I +D G L+S+ V I VTD ND +P S YE
Sbjct: 2138 QRSFDYEQDREFQIQIMAKDNGSPPLNSSVIVTICVTDQNDNSPLVLYPSADAGGSAAYE 2197
Query: 109 FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEK 165
+ G V +V A DAD G NA + Y +D FV+D TG+IRT++ +++
Sbjct: 2198 MVPFSSEQGTLVTKVVAVDADSGHNAWLSYHFLQDSETSYFVIDQYTGEIRTSRV--FQE 2255
Query: 166 QQLYLERVFLISK 178
+ + +V +I K
Sbjct: 2256 RDILRHKVVVIVK 2268
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 84/190 (44%), Gaps = 33/190 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD--AASYFNLDPAT------ 70
Y A + + G + + A D D G V Y +L+ NTD +SYF+++ T
Sbjct: 455 YDAFLPENNLPGALIYSLHAKDLDVGDNAKVTYSILNTNTDFSVSSYFSINIETGVLYAQ 514
Query: 71 -------EHQGPIQ----DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFS------- 110
+ IQ D G LSS AT+ I +TD ND P P E
Sbjct: 515 RTFDFEVHKEFLIQVLASDNGSPPLSSNATLIIHITDQNDNTPTILYPPIESGGSTLFEM 574
Query: 111 VP-EGQDGLAVGRVHATDADEGQNAVV---YYSVPEDIPFVVDANTGDIRTNKALDYEKQ 166
VP + G + +V A DAD G N+ + + + E PF + +TG+IRT++ EK
Sbjct: 575 VPFASEQGSLITKVVAVDADSGHNSWLSFHFIQLSETSPFTISQHTGEIRTSRTFQ-EKD 633
Query: 167 QLYLERVFLI 176
L + V ++
Sbjct: 634 VLKYKLVVMV 643
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 26/164 (15%)
Query: 30 GVTLMQVKATDKDSGK--------FGLVEYRLLDNNTDAASYFNLDPATEHQGP-----I 76
G + +KA D DSG+ G V ++LL ++ + + + P I
Sbjct: 1183 GTVVALIKAHDLDSGENGEVDCEIMGTVPFKLLSSSGNFYKIVTTNSLDREKSPYYNITI 1242
Query: 77 Q--DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEG 131
Q D G L++ + + V+DIND +P F+ L Y VPE Q G ++ + A D D
Sbjct: 1243 QAIDRGSPPLTAKKIIRLDVSDINDNSPLFEKLTYVAYVPENNQPGASIYSIQAIDKDTE 1302
Query: 132 QNAVVYYSV-------PEDIPFV-VDANTGDIRTNKALDYEKQQ 167
+NA + YS+ P ++ ++ TG I ++ DYE+++
Sbjct: 1303 ENAKLTYSIISSNTEEPSSASYISINPVTGIIYAQRSFDYEQER 1346
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 70/172 (40%), Gaps = 21/172 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y R+ L T++ V A DKD G + Y + A+ F ++ +
Sbjct: 3525 YKVSIRENMPLNSTILHVSANDKDEGINAQITYSFSATSKQASRSFAINAISGEIKTKEN 3584
Query: 71 ---------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAV 120
E +D GGL S A V I + D ND PE ++ E G+ V
Sbjct: 3585 IDFEKTKYYEISVQARDGGGLVSHAKVLIEIIDENDNIPEISVTSVTTAISEDSPSGIVV 3644
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
+ A D D G+N + + + +PF + + +G+ I T+ LD E + Y
Sbjct: 3645 ALIVAHDLDSGENGEMDCQIIDLVPFKLLSTSGNFYKIVTSSTLDREMKSHY 3696
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 36/179 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVE------------------YRLLDNNT---DAASYFNLDP 68
G + +KA D DSG G VE Y+++ +T + +S +N+
Sbjct: 4459 GTVVALIKARDLDSGINGEVECQIIGSVPFKLSLSSGNFYKIVTTSTLDREISSNYNITI 4518
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPY-EFSVPEGQDGLAVGRVHATD 127
+ +G L T + + ++DIND P F+ L Y + + Q G ++ V ATD
Sbjct: 4519 QAKDKG----SPSLIFTKILRVDISDINDNPPVFEKLMYVAYVLENNQPGASIYSVQATD 4574
Query: 128 ADEGQNAVVYYSV--------PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
D +NA + YS+ P ++ TG I ++ DYE+++ + ++ +++K
Sbjct: 4575 KDAAENAKLMYSIINNNTMEGPSSSYISINPVTGVIYAQRSFDYEQEREF--KILIMAK 4631
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 70/173 (40%), Gaps = 21/173 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y + L T++ V A+DKD G + Y + A + F ++P +
Sbjct: 2707 IYKVSINENMPLNSTVLYVSASDKDEGINSQLTYSFSSASKQATNAFAINPQSGEVITKD 2766
Query: 71 ----------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLA 119
E +D GGL S A V I++ D ND PE V E G
Sbjct: 2767 ILDFEKMKNYEIAVQAKDGGGLISHAKVLIQILDENDNPPEVSLTSITNPVSEESAPGTV 2826
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
V + A D D G+NA V + +PF + +++G+ I T LD EK Y
Sbjct: 2827 VALIRAHDPDYGENAEVDCQIIGTVPFKLLSSSGNFYKIVTTGTLDREKSSHY 2879
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
+ TA + + +TD ND P F Y+ S+ E + V A D DEG NA + YS
Sbjct: 3501 TGTALIRVTITDSNDNFPIFAQEVYKVSIRENMPLNSTILHVSANDKDEGINAQITYSFS 3560
Query: 142 E-----DIPFVVDANTGDIRTNKALDYEKQQLY 169
F ++A +G+I+T + +D+EK + Y
Sbjct: 3561 ATSKQASRSFAINAISGEIKTKENIDFEKTKYY 3593
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 63/164 (38%), Gaps = 37/164 (22%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------------- 76
A D D G + Y+L DN YF L T G
Sbjct: 155 AEDPDIGSNSVQTYKLSDNQ-----YFTLSEKTSSDGSTFPELVLEKALDREKENTLGLI 209
Query: 77 ---QDEGGLSSTATVNIRV--TDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
D G T T+ IRV TD ND P F Y+ +V E V V A+D DE
Sbjct: 210 LTASDGGNPVKTGTLLIRVVITDANDNFPVFSKDVYKTTVNENMPVNSTVISVTASDKDE 269
Query: 131 GQNAVVYYSVPEDIP-----FVVDANTGDIRTNKALDYEKQQLY 169
G NA + YSV + F ++ G+I+ K LDYE Q Y
Sbjct: 270 GTNAQITYSVSKTTNNALHVFSINPFNGEIKIQKHLDYEATQNY 313
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 26/164 (15%)
Query: 30 GVTLMQVKATDKDSGKFG--------LVEYRLLDNNTD-----AASYFNLDPATEHQGPI 76
G+ + + A D DSG+ G LV ++LL + + +S + + + + I
Sbjct: 3641 GIVVALIVAHDLDSGENGEMDCQIIDLVPFKLLSTSGNFYKIVTSSTLDREMKSHYDITI 3700
Query: 77 Q--DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
Q D+G LSS T+ + V+DIND P F+ Y + E + G ++ + A+D D
Sbjct: 3701 QATDKGSPPLSSRKTIRLDVSDINDNAPVFEKSTYIVYISENNEPGASIYSIQASDKDSE 3760
Query: 132 QNA-VVYYSV------PEDIPFV-VDANTGDIRTNKALDYEKQQ 167
+NA +VY S+ P ++ ++ TG I +++DYE+ +
Sbjct: 3761 ENAKLVYSSITSNREEPSLASYISINPVTGVIYAQRSIDYEQSK 3804
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 69/160 (43%), Gaps = 27/160 (16%)
Query: 37 KATDKDSGKFGLVEYRLLDNN-----TDAASYFNLDPATEHQGPIQDE------------ 79
KA D D GK L Y+L N +S + P + P+ E
Sbjct: 976 KAEDLDVGKNSLESYKLSANKHFVLTERTSSDTSTIPELVLEAPLDRETESIHELVLTAF 1035
Query: 80 -GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNA 134
GG + TA + I V+D ND P F Y S+ E + RV A D DEG N+
Sbjct: 1036 DGGNPVQTGTAIIKIIVSDFNDNAPIFTQEVYTVSLNENIPVNSTILRVSANDKDEGSNS 1095
Query: 135 -VVYYSVPEDI----PFVVDANTGDIRTNKALDYEKQQLY 169
+ YY F++D+ +G+++T + LD+EK + Y
Sbjct: 1096 QITYYFAASSKQAMNTFIIDSISGEVKTKENLDFEKIKHY 1135
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 66/159 (41%), Gaps = 21/159 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQG 74
T+++V A DKD G + Y ++ A + F +D + E
Sbjct: 1080 TILRVSANDKDEGSNSQITYYFAASSKQAMNTFIIDSISGEVKTKENLDFEKIKHYEISV 1139
Query: 75 PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQN 133
+D GGL S A + I++ D ND P + E G V + A D D G+N
Sbjct: 1140 QAKDGGGLVSHAKILIQIIDENDNAPGITITSINTPISEDSAPGTVVALIKAHDLDSGEN 1199
Query: 134 AVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
V + +PF + +++G+ I T +LD EK Y
Sbjct: 1200 GEVDCEIMGTVPFKLLSSSGNFYKIVTTNSLDREKSPYY 1238
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 75/160 (46%), Gaps = 27/160 (16%)
Query: 37 KATDKDSGKFGLVEYRLLDN---------NTDAASYFNL------DPATE--HQGPIQ-- 77
KA D D G L Y+L N +TD+++ L D TE H+ +
Sbjct: 1777 KAEDLDVGTNSLKNYKLSANKHFVLSERTSTDSSTIPELVLETPLDRETENIHELVLTAF 1836
Query: 78 DEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNA 134
D G L + TA + I VTD ND P F Y+ S+ E + V A D DEG N+
Sbjct: 1837 DGGNLVQTGTALIRITVTDFNDNLPVFSQEVYKVSINENIPINSTILYVSANDKDEGINS 1896
Query: 135 VVYY---SVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
+ Y + + I F++++ +G I T + LD+EK +LY
Sbjct: 1897 QIRYYFSTSSKQILNTFIINSISGAIMTKENLDFEKTKLY 1936
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 63/162 (38%), Gaps = 21/162 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------E 71
L T++ V A DKD G + Y + A+ F+++ T E
Sbjct: 4353 LNSTVLCVSANDKDQGINSQITYSFSATSKQASRSFSINSETGEIKTKENLDFEKTKNYE 4412
Query: 72 HQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE 130
+D GGL S A V I++ D ND PE V E G V + A D D
Sbjct: 4413 ISVQAKDGGGLVSHAKVLIQILDENDNAPEISVTSVTTPVSEDSAPGTVVALIKARDLDS 4472
Query: 131 GQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
G N V + +PF + ++G+ I T LD E Y
Sbjct: 4473 GINGEVECQIIGSVPFKLSLSSGNFYKIVTTSTLDREISSNY 4514
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 70/172 (40%), Gaps = 21/172 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y + + T++ V A+DKD G + Y + +A F+++P
Sbjct: 245 YKTTVNENMPVNSTVISVTASDKDEGTNAQITYSVSKTTNNALHVFSINPFNGEIKIQKH 304
Query: 69 ----ATE-HQGPIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAV 120
AT+ ++ IQ D GGL + V + V D ND PE +PE G +
Sbjct: 305 LDYEATQNYELAIQAKDGGGLVAHCKVLVEVMDENDNEPEINFASLFSPIPEHSIAGTVI 364
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDANTG---DIRTNKALDYEKQQLY 169
+ D D G+N V + + F + ++TG I T LD E+ Y
Sbjct: 365 ALIEVHDQDSGENGEVDCHLTDSADFQLISSTGRFYRIVTTNNLDRERTPFY 416
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
+ TA + I VTD+ND P F Y S+ E V V A D D+G N+ + YS
Sbjct: 4319 TGTALIRITVTDMNDNFPIFGQEVYTVSINENIPLNSTVLCVSANDKDQGINSQITYSFS 4378
Query: 142 E-----DIPFVVDANTGDIRTNKALDYEKQQLY 169
F +++ TG+I+T + LD+EK + Y
Sbjct: 4379 ATSKQASRSFSINSETGEIKTKENLDFEKTKNY 4411
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 71/174 (40%), Gaps = 33/174 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLD-------------------NNTDA--ASYFNLDP 68
G + ++ D+DSG+ G V+ L D NN D ++N+
Sbjct: 361 GTVIALIEVHDQDSGENGEVDCHLTDSADFQLISSTGRFYRIVTTNNLDRERTPFYNITI 420
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
+G Q +S + + ++D+ND P F Y+ +PE G + +HA D
Sbjct: 421 LATDRGYPQR----TSKKMIGVEISDVNDNAPLFIKPTYDAFLPENNLPGALIYSLHAKD 476
Query: 128 ADEGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYEKQQLYLERVF 174
D G NA V YS+ F ++ TG + + D+E + +L +V
Sbjct: 477 LDVGDNAKVTYSILNTNTDFSVSSYFSINIETGVLYAQRTFDFEVHKEFLIQVL 530
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
+ TA + I VTD ND P F Y+ S+ E V V A+D DEG N+ + YS
Sbjct: 2684 TGTALIRITVTDANDNFPMFSQEIYKVSINENMPLNSTVLYVSASDKDEGINSQLTYSFS 2743
Query: 142 EDI-----PFVVDANTGDIRTNKALDYEKQQLY 169
F ++ +G++ T LD+EK + Y
Sbjct: 2744 SASKQATNAFAINPQSGEVITKDILDFEKMKNY 2776
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 69/181 (38%), Gaps = 21/181 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF-------------N 65
Y + + T++ V A DKD G + Y ++ + F N
Sbjct: 1868 YKVSINENIPINSTILYVSANDKDEGINSQIRYYFSTSSKQILNTFIINSISGAIMTKEN 1927
Query: 66 LD----PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAV 120
LD E +D GGL S A V I+ D ND PE + E G V
Sbjct: 1928 LDFEKTKLYEISVQAKDGGGLVSHAKVLIQTLDENDNAPEISVTSITTPISEDSPSGTVV 1987
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLYLERVFLIS 177
+ A D D G+N V + +PF + +++G+ I T LD EK Y + +
Sbjct: 1988 ALIEAHDVDSGENGEVDCQIIGTVPFKLLSSSGNFYKIVTTGTLDREKSPYYSITILAMD 2047
Query: 178 K 178
K
Sbjct: 2048 K 2048
Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 26/164 (15%)
Query: 30 GVTLMQVKATDKDSGK--------FGLVEYRLLDNNTDAASYFNLDPATEHQGP------ 75
G + ++A D DSG+ G V ++LL ++ + + P
Sbjct: 1984 GTVVALIEAHDVDSGENGEVDCQIIGTVPFKLLSSSGNFYKIVTTGTLDREKSPYYSITI 2043
Query: 76 -IQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEG 131
D+G L+ T+ + V+DIND P F+ Y +PE Q G ++ + A D D
Sbjct: 2044 LAMDKGSPPLTFRKTIRLDVSDINDNPPVFKYPNYLAYIPENNQPGASIYSIQAIDNDSE 2103
Query: 132 QNAVVYYSV-------PEDIPFV-VDANTGDIRTNKALDYEKQQ 167
+NA + YS+ P ++ ++ TG I ++ DYE+ +
Sbjct: 2104 ENAKLIYSIINMNTGEPSPSSYISINPVTGVIYAQRSFDYEQDR 2147
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 26/164 (15%)
Query: 30 GVTLMQVKATDKDSGK--------FGLVEYRLLDNNTD-----AASYFNLDPATEHQGPI 76
G + ++A D D G+ G V ++LL ++ + + + ++ + I
Sbjct: 2824 GTVVALIRAHDPDYGENAEVDCQIIGTVPFKLLSSSGNFYKIVTTGTLDREKSSHYYITI 2883
Query: 77 Q--DEGG--LSSTATVNIRVTDINDKNPEFQSLPY-EFSVPEGQDGLAVGRVHATDADEG 131
Q D+G LS + T+ V+D ND P F+ Y + + Q G ++ ++ ATD D
Sbjct: 2884 QATDKGSPPLSFSKTIRFNVSDTNDNPPVFEKRNYIAYVLENNQPGASIYKILATDKDSE 2943
Query: 132 QNAVVYYSV----PEDIP----FVVDANTGDIRTNKALDYEKQQ 167
+N+ V YS+ E++ ++ TG I ++ DYE+ +
Sbjct: 2944 ENSKVTYSITSINTEELSSASYISINPVTGVIYAQRSFDYEQDR 2987
>gi|296486895|tpg|DAA29008.1| TPA: cadherin EGF LAG seven-pass G-type receptor 1-like [Bos
taurus]
Length = 2171
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 51/159 (32%), Positives = 76/159 (47%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQ-- 73
+G +++ ++A D+D+ ++ Y+L NT + LD E Q
Sbjct: 463 VGSSVLTLRALDRDANS--VITYQLTGGNTRNRFALSSQSGGGLITLALPLDYKQERQYV 520
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G S TA V I VTD N P FQS Y SV E + G ++ + ATD D G
Sbjct: 521 LAVTASDGMRSHTAQVFINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATISATDEDTG 580
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + +P F +D +TG + T LDYE Q Y
Sbjct: 581 ENARITYVLEDPVPQFRIDPDTGTVYTMTELDYEDQAAY 619
Score = 63.5 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 55/182 (30%), Positives = 81/182 (44%), Gaps = 35/182 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY------------------------RL 53
FY + +++QV ATD+DSG G + Y R
Sbjct: 657 FYQGSVFEDAPPSTSVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRR 716
Query: 54 LDNNTDAASYFNLDP-ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
LD A +NL A + P+ LS++ + + V DIND P F+ E V
Sbjct: 717 LDRENVAV--YNLRALAVDRGSPVS----LSASVEIQVTVLDINDNPPVFEKDELELFVE 770
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQL 168
E G V R+ A+D DEG NA + Y + E ++P F +D +GD+R LD+E +Q
Sbjct: 771 ENSPVGSVVARIRASDPDEGPNAQIMYQIVEGNVPEVFQLDLLSGDLRALVELDFEARQE 830
Query: 169 YL 170
Y+
Sbjct: 831 YV 832
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 28/187 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y + +G ++ + ATD+D+G+ + Y L D F +DP T
Sbjct: 552 SSHYTVSVSEDRPVGTSIATISATDEDTGENARITYVL----EDPVPQFRIDPDTGTVYT 607
Query: 71 ------EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E Q +D G S T ++ I + D ND P F Y+ SV E
Sbjct: 608 MTELDYEDQAAYTLAITARDNGIPQKSDTTSLEILILDANDNAPRFLRDFYQGSVFEDAP 667
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
+V +V ATD D G N + Y+ D F ++ +G IRT + LD E +Y
Sbjct: 668 PSTSVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRENVAVYNL 727
Query: 172 RVFLISK 178
R + +
Sbjct: 728 RALAVDR 734
Score = 43.1 bits (100), Expect = 0.045, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 21/109 (19%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
++S+ V+++V D+ND P F S P++ +V E G +V + A DAD G+NA + Y +
Sbjct: 306 INSSGLVSVQVLDVNDNAPIFVSSPFQAAVLENVPLGHSVLHIQAVDADAGENARLRYRL 365
Query: 141 PE--------------------DIPFVVDANTGDIRTNKALDYEKQQLY 169
+ D PF + ++G I LD E+ + Y
Sbjct: 366 VDTASASVGGGGAAPAAPAPAADFPFQIHNSSGWITVCAELDREEVEHY 414
Score = 42.0 bits (97), Expect = 0.10, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 100 PEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP------EDIPFVVDANT 152
P+FQ Y+ SVPE + G AV + A D DEG+ + Y + + F++DA+T
Sbjct: 1249 PQFQLPSYQVSVPENEPAGTAVIELRAHDPDEGEAGRLGYQMEALFDERSNGYFLIDADT 1308
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G + T + LD E + ++ +V
Sbjct: 1309 GLVSTARPLDRETKDTHVLKV 1329
Score = 36.2 bits (82), Expect = 6.4, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 63/154 (40%), Gaps = 37/154 (24%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDP------------------ 68
G +++++A D D G+ G + Y+ L D ++ YF +D
Sbjct: 1267 GTAVIELRAHDPDEGEAGRLGYQMEALFDERSNG--YFLIDADTGLVSTARPLDRETKDT 1324
Query: 69 ------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
A +H P + S+ + + V+D ND +P F+ Y V E + G V
Sbjct: 1325 HVLKVTAVDHGSPRR-----SAATYLTVTVSDTNDHSPVFEQSEYRERVRENLEVGYEVL 1379
Query: 122 RVHATDADEGQNAVVYYSVPED--IPFVVDANTG 153
+ ATD D NA + Y + E + F +D G
Sbjct: 1380 TIRATDGDAPSNANMRYRLLEGFFVVFEIDERLG 1413
Score = 35.4 bits (80), Expect = 10.0, Method: Composition-based stats.
Identities = 41/187 (21%), Positives = 74/187 (39%), Gaps = 52/187 (27%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDN-------------------------------- 56
LG +++ ++A D D+G+ + YRL+D
Sbjct: 341 LGHSVLHIQAVDADAGENARLRYRLVDTASASVGGGGAAPAAPAPAADFPFQIHNSSGWI 400
Query: 57 ------NTDAASYFNLD-PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF 109
+ + +++ A +H P +SS+A+V+I V D+ND +P F YE
Sbjct: 401 TVCAELDREEVEHYSFGVEAVDHGSP-----PMSSSASVSITVLDVNDNDPVFTQPVYEL 455
Query: 110 SVPE-GQDGLAVGRVHATDADEGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDY 163
+ E G +V + A D D N+V+ Y + + G I LDY
Sbjct: 456 RLNEDAAVGSSVLTLRALDRD--ANSVITYQLTGGNTRNRFALSSQSGGGLITLALPLDY 513
Query: 164 EKQQLYL 170
++++ Y+
Sbjct: 514 KQERQYV 520
>gi|158253491|gb|AAI54052.1| pcdhac2 protein [Xenopus (Silurana) tropicalis]
Length = 967
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 70/165 (42%), Gaps = 38/165 (23%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQGPIQD-- 78
A D D G + Y+L DN YF LD T Q P+
Sbjct: 153 AQDPDLGTNSIQTYKLSDN-----EYFALDLKTFNGNSKLIEIVLKKALDREQKPLHQLL 207
Query: 79 ----EGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
+GG S TA V++RV D ND P F Y+ SVPE G V +++A D DE
Sbjct: 208 LTAIDGGTPAKSGTAQVSVRVMDTNDNTPYFDKSTYKASVPENSPAGTLVIKLNAIDPDE 267
Query: 131 GQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
G N V YS P F +D G+IR N A+DYEK Y
Sbjct: 268 GSNGDVLYSFSSYTPQKVRQLFTIDPQKGEIRINGAVDYEKASEY 312
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 78/175 (44%), Gaps = 32/175 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL-----------------DNNTDAA 61
Y + + GV+L+ VKATD DS + V Y LL DN T A
Sbjct: 455 YSIYIMENNAPGVSLISVKATDLDSNENSFVSYSLLRGDIEGLPVSSYVSIKSDNGTIYA 514
Query: 62 SY-FNLDPATEHQGPI--QDEG--GLSSTATVNIRVTDINDKNPEF-------QSLPYEF 109
+ F+ + E + QD G LSS+ATVNI + D ND P S E
Sbjct: 515 VHSFDYEKLREFHFVVQAQDAGNPSLSSSATVNIFIMDQNDHAPTILFPSTANGSASIEM 574
Query: 110 SVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKAL 161
G V +V A D D GQNA ++Y++ + F V+ +TG+IRT + +
Sbjct: 575 IPRSANVGYLVAKVIAIDLDSGQNAWLFYNLSQASDPKLFQVELHTGEIRTTRKV 629
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 76/177 (42%), Gaps = 36/177 (20%)
Query: 19 YGAMARDKH-ELGVTLMQVKATDKDSGKFGLVEYRLLDN---------NT---------- 58
Y +A + H E V LM V TD+DSG V R+ N NT
Sbjct: 352 YSPVAENSHDETVVALMSV--TDQDSGLNKQVSLRIQPNIPFKLTSFKNTYKLVTVGKLD 409
Query: 59 -DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-D 116
+ +S +N+ G LS+ T+ + V+D+ND P F+ Y + E
Sbjct: 410 REKSSSYNITVTVTDSG----TPPLSTQKTLYVEVSDLNDNPPTFEEKSYSIYIMENNAP 465
Query: 117 GLAVGRVHATDADEGQNAVVYYSV----PEDIP----FVVDANTGDIRTNKALDYEK 165
G+++ V ATD D +N+ V YS+ E +P + ++ G I + DYEK
Sbjct: 466 GVSLISVKATDLDSNENSFVSYSLLRGDIEGLPVSSYVSIKSDNGTIYAVHSFDYEK 522
>gi|410056082|ref|XP_003953964.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 1 [Pan troglodytes]
Length = 2852
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 24/174 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA------------ASYFNL 66
Y R+ E+G ++ ++A+D+DS + YR+L D + +
Sbjct: 352 YRERVRENLEVGYEVLTIRASDRDSPINANLRYRVLGGAWDVFQLNESSGVVSTRAVLDR 411
Query: 67 DPATEHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-- 118
+ A E+Q ++ + G LS+TATV I V D ND P+F Y VPE GL
Sbjct: 412 EEAAEYQLLVEANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNYVVQVPE-DVGLNT 470
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLY 169
AV RV ATD D+GQNA ++YS+ F + + +G + LD+E Q Y
Sbjct: 471 AVLRVQATDRDQGQNAAIHYSILSGNVAGQFYLHSLSGILDVINPLDFEDVQKY 524
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQ-- 73
+G +++ ++A D+D+ ++ Y+L NT + LD E Q
Sbjct: 696 VGSSVLTLQARDRDANS--VITYQLTGGNTRNRFALSSQRGGGLITLALPLDYKQEQQYV 753
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G S TA V I VTD N P FQS Y SV E + G ++ + A D D G
Sbjct: 754 LAVTASDGTRSHTAHVLINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATLSANDEDTG 813
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + +P F +D ++G + T LDYE Q Y
Sbjct: 814 ENARITYVIQDPVPQFRIDPDSGTMYTMMELDYENQVAY 852
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 39/180 (21%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN--------LDP-----ATEHQGP 75
L +++V+ATD+D G+ + Y +L N Y + ++P ++
Sbjct: 468 LNTAVLRVQATDRDQGQNAAIHYSILSGNVAGQFYLHSLSGILDVINPLDFEDVQKYSLS 527
Query: 76 IQDEGG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
I+ + G ++S+ V+++V D+ND P F S P++ +V E G V + A DAD
Sbjct: 528 IKAQDGGRPPLINSSGVVSVQVLDVNDNEPIFVSSPFQATVLENVPLGYPVVHIQAVDAD 587
Query: 130 EGQNAVVYYSVPE--------------------DIPFVVDANTGDIRTNKALDYEKQQLY 169
G+NA ++Y + + D PF + ++G I LD E+ + Y
Sbjct: 588 SGENARLHYRLVDTASAFLGGGSAGPKNPAPTPDFPFQIHNSSGWITVCAELDREEVEHY 647
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 31/166 (18%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ-------------- 77
+++QV ATD+DSG G + Y ++ ++ ++P + G I+
Sbjct: 904 SILQVSATDRDSGPNGRLLYTFQGGDSGDGDFY-IEPTS---GVIRTQRRLDRENVAMYN 959
Query: 78 ------DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
D G LS++ + + + DIND P F+ E V E G V ++ A D
Sbjct: 960 LWALAVDRGSPTPLSTSVEIQVTILDINDNAPMFEKDELELFVEENNPVGSVVAKIRAHD 1019
Query: 128 ADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
DEG NA + Y + E D+ F +D GD+R LD+E ++ Y+
Sbjct: 1020 PDEGPNAQIMYQIVEGDMRHFFQLDLLNGDLRAMVELDFEVRREYV 1065
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y + +G ++ + A D+D+G+ + Y + D F +DP +
Sbjct: 785 SSHYTVSVSEDRPVGTSIATLSANDEDTGENARITYVI----QDPVPQFRIDPDSGTMYT 840
Query: 71 ------EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E+Q QD G S T T+ I + D ND P+F Y+ S+ E
Sbjct: 841 MMELDYENQVAYTLTIMAQDNGIPQKSDTTTLEILILDANDNAPQFLWDFYQGSIFEDAP 900
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ +V ATD D G N + Y+ D F ++ +G IRT + LD E +Y
Sbjct: 901 PSTSILQVSATDRDSGPNGRLLYTFQGGDSGDGDFYIEPTSGVIRTQRRLDRENVAMY 958
>gi|291407998|ref|XP_002720204.1| PREDICTED: protocadherin 11 X-linked isoform 5 [Oryctolagus
cuniculus]
Length = 1320
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 80/174 (45%), Gaps = 26/174 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
F + + G L ++ ATD DSG+ + Y L TDA FNLD T
Sbjct: 470 FISISVPENNSPGTQLTKISATDADSGRNAEINYLL---GTDAPPEFNLDHRTGILTAVK 526
Query: 71 ----EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--QD 116
E Q +D G L + ATV + V D ND +P F Y F VPE +
Sbjct: 527 KLDREKQEKYYFTVLAKDNGIPPLITNATVLVTVLDQNDNSPIFTHNEYNFYVPENLPRH 586
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLY 169
G VG + TD D G+N+ V S+ + + F +D TG IR N + D EKQ+ Y
Sbjct: 587 G-TVGLITVTDPDYGENSAVTLSIVDVNDEFTIDPQTGVIRPNISFDREKQESY 639
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+ ++ + ++V D ND P F SVPE G + ++ ATDAD G+NA + Y +
Sbjct: 446 LNQSSMLLVKVKDENDNAPVFTQPFISISVPENNSPGTQLTKISATDADSGRNAEINYLL 505
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
D P F +D TG + K LD EKQ+ Y
Sbjct: 506 GTDAPPEFNLDHRTGILTAVKKLDREKQEKY 536
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 10/98 (10%)
Query: 78 DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
++GG SSTA + + V D ND P F+ E S+PE G +V ++HATDAD G+N
Sbjct: 222 EDGGFPQRSSTAILQVSVADTNDNRPVFKENEIEVSIPENAPVGTSVTQLHATDADIGEN 281
Query: 134 AVVYYSVPEDIP------FVVDANTGDIRTNKALDYEK 165
A +++ + F ++ TG I + LD E+
Sbjct: 282 AKIHFYFSNLVSNIAKRLFHLNTTTGLITVKEPLDREE 319
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 64/150 (42%), Gaps = 30/150 (20%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP---------------I 76
T+ + TD D G+ V ++D N + F +DP T P +
Sbjct: 588 TVGLITVTDPDYGENSAVTLSIVDVNDE----FTIDPQTGVIRPNISFDREKQESYTFYV 643
Query: 77 QDEGG----LSSTATVNIRVTDINDKNPEFQSLP----YEFSVPEGQDGLAVGRVHATDA 128
+ E G SSTA V I V D+ND P F P YE +P G V +V A D
Sbjct: 644 KAEDGGRVSRSSTAKVTINVVDVNDNKPVFVIPPSNYSYELVLPSTNPGAVVFQVVAVDN 703
Query: 129 DEGQNAVVYYSVPEDIP---FVVDANTGDI 155
D G NA + YS+ F++D +G+I
Sbjct: 704 DTGMNAEIRYSIAGGNAKGLFIIDQTSGNI 733
Score = 35.8 bits (81), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 64/170 (37%), Gaps = 30/170 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEY-----------RLLDNNTDAASYFNLDPATEHQGPIQ 77
+G ++ Q+ ATD D G+ + + RL NT +P + P
Sbjct: 264 VGTSVTQLHATDADIGENAKIHFYFSNLVSNIAKRLFHLNTTTGLITVKEPLDREEAPSH 323
Query: 78 -------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA--------VGR 122
D G + + A V + VTDIND P + Y + G L+ V
Sbjct: 324 KLLVLATDGGSMPARAMVLVNVTDINDNVPSI-DIRYIINPTNGTVVLSENAPLNTKVAL 382
Query: 123 VHATDADEGQNAVVYYSVPEDIPFV---VDANTGDIRTNKALDYEKQQLY 169
+ TD D N V ++PF V +N + T LDYE + Y
Sbjct: 383 ITVTDKDADHNGRVTCFTDHEVPFRLRPVFSNQFLLETAAYLDYESTREY 432
>gi|390337821|ref|XP_785601.3| PREDICTED: protocadherin Fat 4 [Strongylocentrotus purpuratus]
Length = 5000
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 79/157 (50%), Gaps = 22/157 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP-----I 76
L+QV ATD D+G G V Y ++ + F+LDP + E Q +
Sbjct: 625 LIQVLATDLDNGVNGDVTYTF--SSDQYSGMFSLDPESGLLQITVPLDREEQDSYELEIL 682
Query: 77 QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQ 132
+GG L +TATV I V D ND P+F Y SV E G GL V V ATD D G
Sbjct: 683 ASDGGSPSLQATATVTIAVLDQNDNPPQFYPTEYYASVIENGPAGLFVTVVSATDLDVGV 742
Query: 133 NAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
N V +S+ + F +D+ +G++ T ++LD E++ Y
Sbjct: 743 NGAVIFSLSDSSKFQIDSYSGNVTTRESLDREQESSY 779
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 82/182 (45%), Gaps = 27/182 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGP 75
Y A R+ + V ATD D ++ Y ++D TD F++D T +G
Sbjct: 1776 YTASIRENVASNSPVKTVMATDADLDT--IIFYSIVDGATD---LFSIDSTTGQIRTRGV 1830
Query: 76 IQDE-------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
+ E G L+ST T++I + D ND +P F Y F VPE + G VG
Sbjct: 1831 VDRESSAVYQLQLQASDGTLTSTTTIDINLLDENDNDPVFSLSTYSFLVPEDEMVGEDVG 1890
Query: 122 RVHATDADEGQNAVVYYSV-----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
V ATD D G N V YSV P + F +D TG R ++LDYE +Q Y V
Sbjct: 1891 VVVATDPDAGLNGEVAYSVVEEGAPGEDVFYLDPATGAFRLQQSLDYEVKQHYFMTVMAT 1950
Query: 177 SK 178
K
Sbjct: 1951 DK 1952
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 76/164 (46%), Gaps = 31/164 (18%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLL---------------------DNNTDAASYFNLDPA 69
V +M ++A D D + VEY LL D T++ SY L A
Sbjct: 2100 VIIMVLRAEDDDVERNSYVEYYLLTPGVPFAVSRVEGNMQVTGPLDRETES-SYALLVQA 2158
Query: 70 TEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
T+ P Q SST + I +TD+ND P F PYE ++ E GL +V A+D
Sbjct: 2159 TDKGTPPQ-----SSTMNLTIYITDVNDNAPAFSMTPYEATLDEDTPVGLEFLKVTASDP 2213
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
DEG N+++ YS+ F +D TG + N L+YE++ Y
Sbjct: 2214 DEGLNSIIRYSIFSGDSGRAFAIDPVTGVLSVNSGLNYEQRSSY 2257
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 70/150 (46%), Gaps = 17/150 (11%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYF---------NLDPATEHQGPIQDE---G 80
++ ATD D G GL+ YR+ NTD+ F LD Q + E G
Sbjct: 1039 VIHALATDADQGTNGLISYRITSGNTDSFGIFPDGMVYVKRALDREQVDQYDLTIEATDG 1098
Query: 81 G---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVV 136
G ++ST + I V D ND P F + Y F + E D G AVG +HA D D G N +
Sbjct: 1099 GVPSMTSTLMLEIIVLDENDNRPFFDNATYNFYLSEEDDIGAAVGTIHAVDNDVGGNGEL 1158
Query: 137 YYSVPED-IPFVVDANTGDIRTNKALDYEK 165
YS + F +++ TG I + +LD E
Sbjct: 1159 TYSFTANHTLFTLNSVTGAITSKVSLDRES 1188
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 77/174 (44%), Gaps = 24/174 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + + +G + V ATD D+G G V Y +++ F LDPAT
Sbjct: 1875 YSFLVPEDEMVGEDVGVVVATDPDAGLNGEVAYSVVEEGAPGEDVFYLDPATGAFRLQQS 1934
Query: 71 ------EH---QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGL 118
+H D+G SSTATV I V D+ND NP + + Y VPE G
Sbjct: 1935 LDYEVKQHYFMTVMATDKGSSPRSSTATVYINVEDVNDNNPVYNPVDYSEEVPEDVAIGT 1994
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+V + ATD D G N + +S+ P F V N G I T K LD E + Y
Sbjct: 1995 SVVTLTATDLDSGSNGELQFSIASGDPSQRFTVYPN-GTIVTIKNLDREPESFY 2047
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 76/175 (43%), Gaps = 27/175 (15%)
Query: 11 EMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-- 68
E SD FY A + ++QV ATD D+ + YRL N+D S F +DP
Sbjct: 2393 EFVSD--FYRATVSEDASADTFVIQVTATDVDAT--AALRYRL---NSDIGSKFTIDPLG 2445
Query: 69 -------------ATEHQGPIQDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPE 113
+ + + + G S AT ++RV D+ND P F Y ++P
Sbjct: 2446 GRILTTGLLDREVQSSYLLTVTVDDGPSRLATTSVRVEVLDVNDNPPRFSPTSYTATLPA 2505
Query: 114 -GQDGLAVGRVHATDADEGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEK 165
Q G V + ATD D NA + YS+ + FVVD +TG + T + E
Sbjct: 2506 TSQQGCFVAAIQATDTDLEDNAAIRYSITSGDTSKFVVDQDTGVVITAQGFTDEN 2560
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 73/169 (43%), Gaps = 21/169 (12%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------EHQGPIQ--- 77
++G T+ V+ATD D G + Y + N D N + +H+ Q
Sbjct: 1352 QIGDTIGGVQATDMDINSNGQISYTITGGNLDGVFGVNANSGEVYLTGYLDHEATSQYSL 1411
Query: 78 ----DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADE 130
+GG L + ++ I + D ND +P F + E +G V RV A+D+D
Sbjct: 1412 NITARDGGSPSLQAVVSMVINIRDCNDNSPIFAYVGVPEIDEEKPEGFEVVRVSASDSDS 1471
Query: 131 GQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLYLERVFL 175
G N V +S+ P F +D +G I TN +D E + + ++ L
Sbjct: 1472 GVNGEVRFSISSQRPSGDFFAIDPESGWITTNSRIDRESEIMATDQFIL 1520
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 77/188 (40%), Gaps = 33/188 (17%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---- 70
D+ Y ++ ++G + + A D D G G + Y N+T F L+ T
Sbjct: 1124 DNATYNFYLSEEDDIGAAVGTIHAVDNDVGGNGELTYSFTANHT----LFTLNSVTGAIT 1179
Query: 71 -----------EHQGP--------IQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEF 109
E P + D G L A VNI V DIND P F Y+
Sbjct: 1180 SKVSLDRESLVEAGQPTTFSIRVRVHDSGQPQLQDHADVNIHVVDINDSPPVFNRESYQA 1239
Query: 110 SVPE-GQDGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEK 165
SV E Q+ + RV ATD D G N+ + YS+ E+ F +D G I LD E
Sbjct: 1240 SVSELAQNETLIIRVSATDDDVGDNSYILYSIVSGNEEKRFHIDHVHGQIVLIAPLDREV 1299
Query: 166 QQLYLERV 173
+ Y+ RV
Sbjct: 1300 TEGYVLRV 1307
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G+ ++V A+D D G ++ Y + D+ F +DP T
Sbjct: 2191 YEATLDEDTPVGLEFLKVTASDPDEGLNSIIRYSIFSG--DSGRAFAIDPVTGVLSVNSG 2248
Query: 71 ---EHQGP------IQDEGGLS--STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
E + QD+G + S+ TV I V D+ND P F+ Y S+ E A
Sbjct: 2249 LNYEQRSSYTLTVRAQDQGYSTQVSSVTVTITVADVNDNAPVFED-SYAPSIMENNLPNA 2307
Query: 120 -VGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+ +V A DAD G N ++ + + D F + + +G I+ + LDYE Q +
Sbjct: 2308 DIVQVRADDADSGVNGMINFRLESDYNGLFTIGSTSGLIQVTEVLDYEDQNEF 2360
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 74/164 (45%), Gaps = 33/164 (20%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDNNTD---------------------AASYFNLDPA 69
V ++ V ATD+DS G V Y + NT+ ASY A
Sbjct: 2712 VQVVSVSATDEDSLSNGDVSYAITLGNTNNAFDISSSGVITTTQPLDRETVASYILTVEA 2771
Query: 70 TEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDA 128
T+ P Q S +A V + VTDIND F + Y+ ++PE G V +H TD
Sbjct: 2772 TDGGNPSQ-----SGSAIVVVTVTDINDNRMSFTKM-YDATIPEDAPPGTHVVTLHTTDP 2825
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
DE N + +S+ + F ++ TG+I N +LD+E + ++
Sbjct: 2826 DE--NNLSQFSIEAGGQSSLFAINPITGEITLNSSLDFEDEAVH 2867
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 25/173 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + ++G + V ATD D G + Y + D +F +D T
Sbjct: 508 YRAGLLESIQVGSFVKSVTATDADEGINADIVYSI---TGDEYGWFQIDNGTGLVTTREK 564
Query: 71 -EHQGPIQ--------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
+H+ Q D+G +++T + I + D+ND+ P F + Y +V E
Sbjct: 565 LDHETAAQVTLTITASDQGLEPMANTTILTIDIQDVNDEYPVFNQIAYSETVEENSPARD 624
Query: 120 VGRVHATDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLY 169
+ +V ATD D G N V Y+ D F +D +G ++ LD E+Q Y
Sbjct: 625 LIQVLATDLDNGVNGDVTYTFSSDQYSGMFSLDPESGLLQITVPLDREEQDSY 677
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 24/163 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLD-----------NNT---------DAASYFNLDP 68
+G +++ + ATD DSG G +++ + N T + S++NL+
Sbjct: 1992 IGTSVVTLTATDLDSGSNGELQFSIASGDPSQRFTVYPNGTIVTIKNLDREPESFYNLEV 2051
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
+ E SSTA V+I VTDIND P F + P + E + + + + A D
Sbjct: 2052 VASDM-TLDPEDRRSSTAQVSIIVTDINDNAPRFTN-PDSVEIAEDTRTNVIIMVLRAED 2109
Query: 128 ADEGQNAVV-YYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D +N+ V YY + +PF V G+++ LD E + Y
Sbjct: 2110 DDVERNSYVEYYLLTPGVPFAVSRVEGNMQVTGPLDRETESSY 2152
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 68/164 (41%), Gaps = 29/164 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRL---------------LDNNTDAASY-----FNLDPATEH 72
++QV+A D DSG G++ +RL L T+ Y F L E
Sbjct: 2309 IVQVRADDADSGVNGMINFRLESDYNGLFTIGSTSGLIQVTEVLDYEDQNEFELIVIAED 2368
Query: 73 QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG-LAVGRVHATDADEG 131
G + + T TVN D ND +PEF S Y +V E V +V ATD D
Sbjct: 2369 SGTPSHQTRTTMTLTVN----DDNDHDPEFVSDFYRATVSEDASADTFVIQVTATDVD-- 2422
Query: 132 QNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERV 173
A + Y + DI F +D G I T LD E Q YL V
Sbjct: 2423 ATAALRYRLNSDIGSKFTIDPLGGRILTTGLLDREVQSSYLLTV 2466
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V + V D ND P F + PY S+ E V V ATDAD + +++YS+ +
Sbjct: 1757 VTVNVLDENDNAPVFTNGPYTASIRENVASNSPVKTVMATDAD--LDTIIFYSIVDGATD 1814
Query: 146 -FVVDANTGDIRTNKALDYEKQQLY 169
F +D+ TG IRT +D E +Y
Sbjct: 1815 LFSIDSTTGQIRTRGVVDRESSAVY 1839
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 75/174 (43%), Gaps = 31/174 (17%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---- 70
D + ++A D +G + V+A D DSG G + Y + + DAA F++D +
Sbjct: 3122 DDTYRSSIAED---VGGYVATVRAEDDDSGINGEITYSI--SGADAA-LFSIDAVSGIVS 3175
Query: 71 -----------EHQGPIQDEG----GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
EHQ + E S+TA + + VTD++D P F Y V E
Sbjct: 3176 LVGSLDRETSDEHQIQVTAEDRAMYSQSATAILIVTVTDVDDNPPVFLPREYRADVFENS 3235
Query: 116 -DGLAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYE 164
V V ATDAD G NA Y + D F ++ TG I T LDYE
Sbjct: 3236 PSATPVVTVTATDADTGTNADFEYIISGGDGTDF-FTINPETGLILTQGNLDYE 3288
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 9/119 (7%)
Query: 48 LVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPY 107
LV LLD T+ N+ P + VN+ +TD+ND +P F Y
Sbjct: 233 LVTNSLLDRETEDFYILNISATDNSSTP------RTGYLIVNVTITDVNDNSPIFTQTTY 286
Query: 108 EFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDY 163
+V E G +V ++ATD D+G N + Y + ++ F +D +TG I + L Y
Sbjct: 287 FATVNESSAAGTSVVHLNATDIDQGSNGDIVYRLKNELTDNFALDPDTGWITLLRQLPY 345
Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 72/177 (40%), Gaps = 26/177 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNN------TDAASYFNLDPATEHQGPI---------- 76
++QV A D+D+G + Y + D N +A + + L G +
Sbjct: 3033 VLQVLAVDQDTGSNAAITYSISDGNGTEKFDVEADTGWILTKGVSLAGDVGITYQLLVKA 3092
Query: 77 QDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
D G + TV +TD ND P F Y S+ E G V V A D D G N
Sbjct: 3093 TDNGNIKKEDETTVTFLITDSNDNAPVFDDDTYRSSIAEDVGGY-VATVRAEDDDSGING 3151
Query: 135 VVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQ-----QLYLERVFLISKFATSYL 184
+ YS+ + F +DA +G + +LD E Q+ E + S+ AT+ L
Sbjct: 3152 EITYSISGADAALFSIDAVSGIVSLVGSLDRETSDEHQIQVTAEDRAMYSQSATAIL 3208
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 20/156 (12%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNT--------DAASYFNLDPATEHQGPI----Q 77
G+ + V ATD D G G V + L D++ + + +LD E + Q
Sbjct: 727 GLFVTVVSATDLDVGVNGAVIFSLSDSSKFQIDSYSGNVTTRESLDREQESSYTLTVTAQ 786
Query: 78 DEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNA 134
D G ++ +AT+ + VTD D EF+ PY F + E + + VG V AT D N
Sbjct: 787 DGSGQAAAQSATIFVTVTDTLDNPLEFELNPYRFQLEENRPNRTEVGTVLATSMD--LNV 844
Query: 135 VVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQ 167
+ Y + P FV+D +G I+T ++D E +
Sbjct: 845 EITYVIVNGDPNGLFVIDFYSGVIKTTLSIDREAHE 880
Score = 39.7 bits (91), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 61/155 (39%), Gaps = 32/155 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------------------- 68
G +++V A+D DSG G V + + + + +F +DP
Sbjct: 1458 GFEVVRVSASDSDSGVNGEVRFSI-SSQRPSGDFFAIDPESGWITTNSRIDRESEIMATD 1516
Query: 69 -------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVG 121
T+ P+ E ++T V I V DIND P F S V
Sbjct: 1517 QFILTVHGTDLAVPV--ESRRTATVDVVIFVRDINDNAPRFTSQQAAAISRSTSANTRVT 1574
Query: 122 RVHATDADEGQNAVVYYS-VPEDIPFVVDANTGDI 155
VHA D D G N V Y+ + +PF +D TG++
Sbjct: 1575 TVHADDPDTGVNGQVTYTLISTGVPFRLDLITGEL 1609
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 22/126 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE---HQGPIQDEGGLSS----T 85
++ V ATD D+G EY + + D +F ++P T QG + E G ++
Sbjct: 3241 VVTVTATDADTGTNADFEYII--SGGDGTDFFTINPETGLILTQGNLDYETGKTTYHLTV 3298
Query: 86 ATVNIRVTDI------------NDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQ 132
A N + T + N+ P+F Y+F V E DG VG V ATD D G
Sbjct: 3299 AATNEQATMVDYAHVIVTLLGENEFYPQFTQHQYDFYVNEHATDGAPVGVVLATDDDLGD 3358
Query: 133 NAVVYY 138
+ +V Y
Sbjct: 3359 DGIVNY 3364
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 59/146 (40%), Gaps = 27/146 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE-----HQ 73
Y A + G +++ + ATD D G G + YRL + TD F LDP T Q
Sbjct: 286 YFATVNESSAAGTSVVHLNATDIDQGSNGDIVYRLKNELTDN---FALDPDTGWITLLRQ 342
Query: 74 GPIQDEGGL-------------SSTATVNIRVTDINDKNPEFQSLPYEF------SVPEG 114
P G L SS+A VN+ V D ND +P + L E S+ E
Sbjct: 343 LPYVANGYLFEVTATDKGSPSQSSSAFVNVMVEDENDHSPVIEVLIPEIEASGVASISET 402
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV 140
+ + A D D +N V S+
Sbjct: 403 MLPGPLFNLKAIDEDREENGRVSMSI 428
>gi|9965297|gb|AAG10031.1|AF282973_2 protocadherin-beta8 [Homo sapiens]
Length = 610
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY + + +++V ATD D+G G + Y L + + + F +D T
Sbjct: 56 FYRVQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKK 115
Query: 71 ----------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
E +D GG S TV I+V D+ND PE + +PE V
Sbjct: 116 QLDFEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVV 175
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
+D D G+N + S+ ED+PF++ ++ G+ + T LD E + Y
Sbjct: 176 ALFSVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEY 227
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
S TA V I V D+ND PEF+ Y + E V +V ATD D G N + YS+
Sbjct: 33 SGTAQVYIEVLDVNDNAPEFEQPFYRVQISEDSPISFLVVKVSATDVDTGVNGEISYSLF 92
Query: 141 --PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
++I F VD TG+IR K LD+EK Q Y
Sbjct: 93 QASDEISKTFKVDFLTGEIRLKKQLDFEKFQSY 125
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 82/197 (41%), Gaps = 39/197 (19%)
Query: 9 ALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL-------------D 55
A TS +LF R+ + + + V ATD+DSG V Y LL
Sbjct: 260 AFTQTSYTLF----VRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVS 315
Query: 56 NNTDAASYFNLDP-------ATEHQGPIQDEG--GLSSTATVNIRVTDINDKNP------ 100
NTD F L A E + D G LSS A V + V D ND +P
Sbjct: 316 INTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVRVLVLDANDNSPFVLYPL 375
Query: 101 EFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIR 156
+ S P VP + G V +V A D D GQNA + Y + E F V A+ G++R
Sbjct: 376 QNSSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVR 435
Query: 157 TNKAL---DYEKQQLYL 170
T + L D K +L +
Sbjct: 436 TARLLSERDAAKHRLVV 452
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L++ + + V+D+ND P F Y V E L +G V ATD D G NA V YS+
Sbjct: 241 LTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSL 300
Query: 141 --PED--IPFV----VDANTGDIRTNKALDYEKQQLYLERV 173
P+D +P ++ + G + ++LDYE Q + RV
Sbjct: 301 LPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRV 341
>gi|355682924|gb|AER97007.1| dachsous 1 [Mustela putorius furo]
Length = 761
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 74/147 (50%), Gaps = 21/147 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNT--DAASYFNLDPAT-----------EHQGPI 76
G + + ATD D+G FG + Y LL+ + F L+ +T EH G
Sbjct: 186 GTLVTTLHATDGDAGAFGRLHYSLLEAGPGPEGREAFALNSSTGELRARVAFDYEHTGSF 245
Query: 77 Q------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
Q D G LS++ TV++ VT ++ +P F + + F VPEG + G ++G V ATD D
Sbjct: 246 QLLVGAADAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQVPEGARRGYSLGHVQATDED 305
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDI 155
G + +V YS+ P F ++ TG +
Sbjct: 306 GGADGLVLYSLATSSPYFGINQTTGAL 332
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 28/162 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQ 73
+G L+ V+A+D D G GLV + + ++ D + F LD ++ HQ
Sbjct: 81 VGAELLHVEASDADPGPHGLVRFTV--SSGDPSGLFELDESSGALRLAHPLDCETQVRHQ 138
Query: 74 GPIQ--DEGGLS-STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
+Q D G+ + A V I V D+ND P F S+ E Q G V +HATD D
Sbjct: 139 LVVQAADPAGVHFALAPVTIEVQDVNDHGPIFPLSLLSTSLAENQPPGTLVTTLHATDGD 198
Query: 130 EGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYE 164
G ++YS+ E P F ++++TG++R A DYE
Sbjct: 199 AGAFGRLHYSLLEAGPGPEGREAFALNSSTGELRARVAFDYE 240
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
SS V + V D+ND P F Y +VPE G + V A+DAD G + +V ++V
Sbjct: 47 SSAVPVTVTVLDVNDNPPVFTHASYRMAVPEDTPVGAELLHVEASDADPGPHGLVRFTVS 106
Query: 142 EDIP---FVVDANTGDIRTNKALDYEKQ 166
P F +D ++G +R LD E Q
Sbjct: 107 SGDPSGLFELDESSGALRLAHPLDCETQ 134
>gi|363732787|ref|XP_420249.3| PREDICTED: protocadherin-11 X-linked-like [Gallus gallus]
Length = 1239
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 75/165 (45%), Gaps = 24/165 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G L ++ ATD DSG+ + Y L +DA FNLD T E Q
Sbjct: 482 GTQLTKISATDADSGRNAEISYIL---GSDAPPIFNLDRRTGILTAVRKLDREKQDRYSF 538
Query: 76 ---IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
+D G L + ATV + V D ND +P F Y F VPE VG + TDAD
Sbjct: 539 TVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLPMYGTVGLITVTDAD 598
Query: 130 EGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYLERV 173
G+NA V S+ F++D TG IR N D E+Q Y +V
Sbjct: 599 SGENAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQV 643
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
SSTA + + VTD+ND P F+ E S+PE G +V ++HATDAD G NA +++
Sbjct: 230 SSTAILQVTVTDVNDNRPVFKENDIEVSIPENAPVGTSVSQLHATDADLGSNAQIHFYFS 289
Query: 142 EDIP------FVVDANTGDIRTNKALDYEKQQLY 169
I F +D TG I + LD E+ ++
Sbjct: 290 NQISSLAKKLFAIDNATGLITIREPLDREESPVH 323
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 20/169 (11%)
Query: 21 AMARDKHELGVTLMQVKATDKDS---GKFGL-----VEYRL---LDNN--TDAASYFNLD 67
+ +K L + + DKDS GK V +RL DN + A++ + +
Sbjct: 368 VLLSEKAPLNTKIALITVMDKDSDLNGKVTCFTDHDVPFRLKPVFDNQFLLETATFLDYE 427
Query: 68 PATEHQGPI--QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
E+ I D G L+ +A + I++ D ND P F S+PE G + +
Sbjct: 428 STREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPENNAPGTQLTK 487
Query: 123 VHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+ ATDAD G+NA + Y + D P F +D TG + + LD EKQ Y
Sbjct: 488 ISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTAVRKLDREKQDRY 536
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 55/132 (41%), Gaps = 27/132 (20%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ--- 77
T+ + TD DSG+ V +L+ + F +DP T E QG
Sbjct: 588 TVGLITVTDADSGENAAVTLSILNGRDN----FIIDPLTGVIRPNITFDREQQGSYTFQV 643
Query: 78 ---DEGGL--SSTATVNIRVTDINDKNPEF----QSLPYEFSVPEGQDGLAVGRVHATDA 128
D G L SSTA V I V D+ND P F + YE G V +V A D
Sbjct: 644 KAVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSSSPGSVVTKVFAVDN 703
Query: 129 DEGQNAVVYYSV 140
D G NA + YS+
Sbjct: 704 DTGMNAELRYSI 715
>gi|449277761|gb|EMC85812.1| Cadherin-23, partial [Columba livia]
Length = 3246
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 74/160 (46%), Gaps = 27/160 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD------------PATEHQG--- 74
G + QV+ATD+D G ++ Y + N D F +D P E Q
Sbjct: 1478 GTAVAQVRATDRDVGLNSVLSYYITRGNEDLT--FRMDRVTGEIATRPSPPDRERQSFYS 1535
Query: 75 ---PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATD 127
++DEG LS+T TV + + D ND P FQ YE ++ EG L + V A D
Sbjct: 1536 LVVTVEDEGNPSLSATTTVYVTILDENDNTPAFQQQLYEVTLDEGPATLNATLVTVQALD 1595
Query: 128 ADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYE 164
DEG N V Y + E F +D+ TG I T K LDYE
Sbjct: 1596 WDEGPNGTVAYDITEGNILGTFHIDSATGQICTVKELDYE 1635
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 80/170 (47%), Gaps = 37/170 (21%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------ 76
LG +++VKATD DSG+F L++Y L D F ++P T G I
Sbjct: 2339 LGTVILRVKATDADSGRFALIQYSL----GDGEGKFGINPNT---GDIYILSALDREKKD 2391
Query: 77 ---------QDEGGLSS-----TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
+ G +SS + V I V DIND P+F + SV E + G +V
Sbjct: 2392 HYTLTAVARDNPGDISSNRRENSVQVLITVLDINDFRPQFSKSQFSTSVYENEPAGTSVI 2451
Query: 122 RVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKAL-DYEKQQL 168
+ ATD DEG N +V YS+ P F ++ ++G I + + L YE+ L
Sbjct: 2452 TMTATDLDEGDNGMVTYSIEGPGAEAFKINKDSGLITSRRRLQSYERFNL 2501
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 77/153 (50%), Gaps = 18/153 (11%)
Query: 30 GVTLMQVKATDKDSGKFGLVEY-------RLLDNNT---DAASYFNLD-PATEHQGPIQD 78
G TL+ + A D D G G + +++ N T + + N A+++ P +
Sbjct: 2246 GTTLISISAVDPDKGANGQITCLEDQSAGKVVANRTVDYEEVQWLNFTVRASDNGSPRR- 2304
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY 137
S+ V +++ DIND NP F Y+ +V E G + RV ATDAD G+ A++
Sbjct: 2305 ----SAEIPVYLQIVDINDNNPVFSQPSYQKAVFEDVPLGTVILRVKATDADSGRFALIQ 2360
Query: 138 YSVPE-DIPFVVDANTGDIRTNKALDYEKQQLY 169
YS+ + + F ++ NTGDI ALD EK+ Y
Sbjct: 2361 YSLGDGEGKFGINPNTGDIYILSALDREKKDHY 2393
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV-PED 143
TVNI+V D+ND P F + PY +PE G + V+ATD D+G V YS P
Sbjct: 68 GTVNIQVGDVNDNAPRFHNQPYSVRIPENTPVGTPIFIVNATDPDQGAGGSVLYSFQPPS 127
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLY 169
F +D+ G + + LDYE Q Y
Sbjct: 128 NFFAIDSGRGIVSVIRELDYEVTQAY 153
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 73/169 (43%), Gaps = 33/169 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---------------- 72
L TL+ V+A D D G G V Y + + N F++D AT
Sbjct: 1584 LNATLVTVQALDWDEGPNGTVAYDITEGNI--LGTFHIDSATGQICTVKELDYEISHGRY 1641
Query: 73 --------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYE--FSVPEGQDGLAVGR 122
Q PI L+STATV + + DIND P F PYE F V EGQ G V
Sbjct: 1642 TLIVTATDQCPIVSRR-LTSTATVLVNLNDINDNCPTFPR-PYEGPFDVTEGQPGPRVWT 1699
Query: 123 VHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
A D D G + V YS+ P FV+ G++R K + +++ +
Sbjct: 1700 FLAHDDDSGPSGQVEYSIVAGDPLGEFVISPVEGELRVRKDAELDRENI 1748
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 9/111 (8%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVP 141
+S+ATV + + D+ND +P FQ+LP+ + EG G +V +V A D DEG N V Y +
Sbjct: 821 TSSATVFVNLLDLNDNDPTFQNLPFAAEIAEGLPAGSSVFQVVAIDLDEGPNGQVTYRMQ 880
Query: 142 EDIP---FVVDANTGDIRTNKALDYEKQQLYLERVF-----LISKFATSYL 184
+P F++++ +G + + LD E+ Y RV + SK +TS L
Sbjct: 881 VGMPRMDFLINSTSGLVTSTAVLDRERIAEYYLRVVASDAGVPSKSSTSTL 931
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 73/163 (44%), Gaps = 24/163 (14%)
Query: 31 VTLMQ--VKATDKDSGKFGLVEYRLLDNNTDAASYFN------------------LDPAT 70
VT++ + A D D G +V Y L+ + D N LDP
Sbjct: 1912 VTMLNGPILALDGDQGSNAVVSYEFLEASLDLFVINNRTGVVSVKPGSVVDREALLDPCL 1971
Query: 71 EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
E +D GGL+STA++ + V D ND P FQ + E G +V +V ATDAD
Sbjct: 1972 EFTLVARDVGGLNSTASLAVTVLDDNDNRPVFQPASITVRLRENSPPGFSVLQVMATDAD 2031
Query: 130 EGQNAVVYYSVP--EDIPFVVDANTGDIRT-NKALDYEKQQLY 169
G N + Y + F++D TG IR N ++D E++ Y
Sbjct: 2032 SGLNQQLDYRIEGGSQDRFLIDTTTGVIRVANISIDREERDAY 2074
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 74/169 (43%), Gaps = 22/169 (13%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL--------LDNNTDA---ASYFNL 66
Y + +G T++QV ATD D G +G V Y LD +T + +
Sbjct: 414 LYNVSLFENTTVGTTVLQVHATDNDVGTYGKVSYFFSDDPDRFSLDKDTGVILLTARLDF 473
Query: 67 DPATEHQGPI--QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRV 123
+ + I +D GG +T V I + D+ND P FQ Y ++ E + + V R+
Sbjct: 474 ETTQRYTLTIIARDGGGEETTGRVRINILDVNDNVPTFQKEAYLGALRENEPSVTQVVRL 533
Query: 124 HATDADEGQNAVVYYSVPEDIPF-------VVDANTGDIRTNKALDYEK 165
A+D D N + YS+ + F V+D G I N LDYE+
Sbjct: 534 RASDEDSSPNNQITYSIVQASAFRDYFDIAVLDG-YGVISVNHPLDYEQ 581
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDA--ASYFNLDP---ATEHQGP 75
G ++ QV A D D G G V YR+ L N+T S LD A +
Sbjct: 856 GSSVFQVVAIDLDEGPNGQVTYRMQVGMPRMDFLINSTSGLVTSTAVLDRERIAEYYLRV 915
Query: 76 IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEG 131
+ + G+ SST+T+ ++V D+ND++P F Y S+PE V R++ TDAD G
Sbjct: 916 VASDAGVPSKSSTSTLTVKVLDVNDESPTFFPAIYNVSLPENVARDFRVVRLNCTDADVG 975
Query: 132 QNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
NA + Y + +D F V G +RT +LD E Y
Sbjct: 976 LNAELSYFITGGNQDGKFSVGFRDGVVRTVVSLDRETVASY 1016
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 26/160 (16%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT--------------------EHQGPIQ 77
ATD D G G V YR++ N ++F ++P+T E +
Sbjct: 1075 ATDADEGVNGRVWYRIIKGN--EHNHFRINPSTGLVMRGVRHLDREQNSSHVLEVEAYNT 1132
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPY-EFSVPEGQD-GLAVGRVHATDADEGQNAV 135
++G + S+ V + V D+ND+ P F Y + E G +V V ATD D G +
Sbjct: 1133 EQGPMRSSVRVIVYVEDVNDEVPVFTQRQYNRLGLRETAGIGTSVAVVRATDRDTGNGGL 1192
Query: 136 VYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V Y + + F +D +TG I T + LDYE + YL V
Sbjct: 1193 VSYKILSGAEGKFEIDESTGLITTIEYLDYETKTSYLMNV 1232
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 72/159 (45%), Gaps = 31/159 (19%)
Query: 38 ATDKDSGKFGLVEYRLL-----------------------DNNTDAASYFNLDPATEHQG 74
A D DSG G VEY ++ + + + ++NL A +G
Sbjct: 1702 AHDDDSGPSGQVEYSIVAGDPLGEFVISPVEGELRVRKDAELDRENIPFYNLTIAARDRG 1761
Query: 75 PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQN 133
LSST V IRV DIND +P +LP ++ E + V R+ A DAD+G N
Sbjct: 1762 ----VPPLSSTMMVGIRVLDINDNDPVLLNLPMNLTLSENTPVSSFVTRILARDADKGPN 1817
Query: 134 AVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
A++ + + + F +++ +G I N+ LD E+ Y
Sbjct: 1818 ALLTFDITSGNTENAFYINSTSGIIYVNRPLDRERVAEY 1856
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 72/176 (40%), Gaps = 38/176 (21%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD---PATEHQGPIQDEGGLSS-- 84
G T+ + A D+D G+ + Y ++ NT+ S F LD A GP+ E S
Sbjct: 204 GTTVRMITAIDQDKGRPRGIGYTIVSGNTN--SIFALDYISGALTLNGPLDRENPFYSAG 261
Query: 85 ---------------------TATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGR 122
T T NI V DIND PEF S Y ++PE Q G A+
Sbjct: 262 FILTVKGTELNDDRTPSNATVTTTFNILVIDINDNAPEFNSSEYSVAIPELAQVGFALPL 321
Query: 123 -VHATDADEGQNAV--VYYSVPEDIPFVVDANT----GDIRTNKA--LDYEKQQLY 169
+ D DEG N+V VY F++ + DIR A LD+E Y
Sbjct: 322 FIQVQDKDEGPNSVFEVYLVGNNSNHFIISPTSIQGKADIRVRVAVPLDFETIPRY 377
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV-- 140
+ TATV + V D+ND P F YE SVPE + ATDADEG N V+Y +
Sbjct: 1033 TGTATVYVTVLDVNDNRPIFLQSSYEVSVPEDIPAASSIVQAATDADEGVNGRVWYRIIK 1092
Query: 141 -PEDIPFVVDANTGDI-RTNKALDYEKQQLYLERV 173
E F ++ +TG + R + LD E+ ++ V
Sbjct: 1093 GNEHNHFRINPSTGLVMRGVRHLDREQNSSHVLEV 1127
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 80/194 (41%), Gaps = 55/194 (28%)
Query: 20 GAMARDKHELGV--TLMQVKATDKDSGKFGLVEYRLLDN---NTDAASYFNLDPATEHQG 74
G + K E+ + + +V ATDKD G G V Y LL N D YF++D + G
Sbjct: 2539 GTILHIKEEIPLRSNVYEVYATDKDEGLNGAVLYNLLKTGAGNKDW-EYFSIDSVS---G 2594
Query: 75 PIQ--------------------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYE---- 108
IQ D+G + + + + DI+D P F P +
Sbjct: 2595 LIQTAMRLDREKQAVYNLIIVACDQGQPAYETMQPLQVALDDIDDNEPIFLRPPKDSPQY 2654
Query: 109 --FSVPE-GQDGLAVGRVH-ATDADEGQNAVVYYSVPEDIPFVVDANT---------GDI 155
SVPE Q G VG V A DADEG NA+VYY F+ N G +
Sbjct: 2655 QALSVPEHSQPGTVVGNVTGAVDADEGSNAIVYY-------FIAAGNRESNFQLSREGKL 2707
Query: 156 RTNKALDYEKQQLY 169
+ + LD EK+ Y
Sbjct: 2708 QVLRDLDREKEPCY 2721
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 72/171 (42%), Gaps = 38/171 (22%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYR----------------LLDNNTDAASY--FNLDPATE 71
G +++ + ATD D G G+V Y L+ + SY FNL
Sbjct: 2447 GTSVITMTATDLDEGDNGMVTYSIEGPGAEAFKINKDSGLITSRRRLQSYERFNLTVVAT 2506
Query: 72 HQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLP------YEFSVPEGQDGLAVGRVHA 125
+G L T +++ V DIND P F P + +P + V V+A
Sbjct: 2507 DKG----HPPLWGTTMLHVEVIDINDNRPVFVRPPNGTILHIKEEIPLRSN---VYEVYA 2559
Query: 126 TDADEGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYEKQQLY 169
TD DEG N V Y++ + F +D+ +G I+T LD EKQ +Y
Sbjct: 2560 TDKDEGLNGAVLYNLLKTGAGNKDWEYFSIDSVSGLIQTAMRLDREKQAVY 2610
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 56/124 (45%), Gaps = 18/124 (14%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYR---------LLDNNTDAASYFNLDPATEHQG 74
R+ G +++QV ATD DSG ++YR L+D T N+ E +
Sbjct: 2013 RENSPPGFSVLQVMATDADSGLNQQLDYRIEGGSQDRFLIDTTTGVIRVANISIDREERD 2072
Query: 75 PIQ------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHA 125
+ D+G LS T TV++ + D+ND PEF + SVPE G V V A
Sbjct: 2073 AYRLTVVAVDQGTPALSGTTTVSLFIDDVNDCRPEFINPIQTVSVPESAAPGTVVAEVTA 2132
Query: 126 TDAD 129
D D
Sbjct: 2133 IDRD 2136
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD---GLAVGRVHATDADEGQNAVVYYSVP--- 141
+ + V D+ND P S P+ ++V ++ G AV +V ATD D G N+V+ Y +
Sbjct: 1447 LRVNVLDVNDNPPVIDS-PFGYNVSVSENVGGGTAVAQVRATDRDVGLNSVLSYYITRGN 1505
Query: 142 EDIPFVVDANTGDIRTNKA-LDYEKQQLY 169
ED+ F +D TG+I T + D E+Q Y
Sbjct: 1506 EDLTFRMDRVTGEIATRPSPPDRERQSFY 1534
Score = 42.4 bits (98), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSV----PEGQDGLAVGRVHATDADEGQNAVVYY 138
+ A VNI + DIND P ++ PY ++ P D V V A D D G+N V Y
Sbjct: 709 TGIAMVNITLLDINDNYPTWKDEPYFINLVEMTPPNSD---VTTVVAIDPDLGENGTVVY 765
Query: 139 SV-PEDIPFVVDANTGDIRTNKA-LDYEK---QQLYLERVFLIS 177
S+ P + + +++ TG IRT LD E Q+ L R ++S
Sbjct: 766 SIRPPNKFYSLNSTTGKIRTTGVLLDRENPNTQEAQLMRRIVVS 809
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADE----GQNAVV 136
L+ST V I V D ND P F Y +V E G V ++ATD D GQ +++
Sbjct: 601 LNSTVPVTIEVFDENDNPPTFSKASYVIAVMEDIMAGATVLFLNATDMDRSREYGQESII 660
Query: 137 YYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
YS+ F ++A +G+I T LD E + Y+
Sbjct: 661 -YSLEGSSHFRINARSGEITTTSLLDREAKSEYI 693
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI 144
A V I + + ND P F Y S+ E G V +VHATD D G V Y +D
Sbjct: 394 ARVKINLINENDNRPVFSKALYNVSLFENTTVGTTVLQVHATDNDVGTYGKVSYFFSDDP 453
Query: 145 -PFVVDANTGDIRTNKALDYEKQQLY 169
F +D +TG I LD+E Q Y
Sbjct: 454 DRFSLDKDTGVILLTARLDFETTQRY 479
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 60 AASYFNLDPATEHQGPIQDEGGLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVP-EGQ 115
A+S N P +G LS T V I + DIND++P+F Y V + +
Sbjct: 2727 ASSQRNWSPPRGQRGGRAQSWDLSGDLTLQEVRIFLDDINDQSPQFTKSEYTAGVATDAK 2786
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV 140
G + RV A DAD G N++V Y++
Sbjct: 2787 VGSELIRVVAVDADVGNNSLVLYNI 2811
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 70/167 (41%), Gaps = 20/167 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL--------LDNNTDAASY-----FN 65
Y + +G + V ATD D G G V Y +D+ S +
Sbjct: 89 YSVRIPENTPVGTPIFIVNATDPDQGAGGSVLYSFQPPSNFFAIDSGRGIVSVIRELDYE 148
Query: 66 LDPATEHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVG 121
+ A + Q D+ LS+ A + I +TD+ D +P F +LPY ++ E G V
Sbjct: 149 VTQAYQLQVNATDQDKNKPLSTLANLAITITDVQDMDPIFINLPYSTNIYENSPPGTTVR 208
Query: 122 RVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEK 165
+ A D D+G+ + Y++ + F +D +G + N LD E
Sbjct: 209 MITAIDQDKGRPRGIGYTIVSGNTNSIFALDYISGALTLNGPLDREN 255
>gi|195354342|ref|XP_002043657.1| GM19756 [Drosophila sechellia]
gi|194127825|gb|EDW49868.1| GM19756 [Drosophila sechellia]
Length = 1638
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 72/167 (43%), Gaps = 28/167 (16%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD--------------------AASYFNLD 67
+L + +V A DKD G ++Y L+ N D S FNL
Sbjct: 379 QLNTLITKVHAMDKDFGVNRQIKYSLMGENHDYFKISKSTGIIRLDKSLDRETISLFNLT 438
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHAT 126
E G + L S ATV + + DIND PEF Y + E G V +V+AT
Sbjct: 439 VKAEDCGVPK----LHSIATVAVNILDINDNPPEFSMRQYSCKILENATHGTEVCKVYAT 494
Query: 127 DADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D G NA ++Y S E F +D+ TGD+ N LDYE + Y
Sbjct: 495 SIDIGVNADIHYFIMSGNEQGKFKMDSTTGDLVLNATLDYEMSKFYF 541
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V I V DIND P F Y SVPE Q + +VHA D D G N + YS+ +
Sbjct: 351 VIITVNDINDNTPIFSMAQYRVSVPEDAQLNTLITKVHAMDKDFGVNRQIKYSLMGENHD 410
Query: 146 -FVVDANTGDIRTNKALDYEKQQLY 169
F + +TG IR +K+LD E L+
Sbjct: 411 YFKISKSTGIIRLDKSLDRETISLF 435
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LS+ A VNI + DIND +P+F Y +V E G + V ATD D N +V Y++
Sbjct: 554 LSNHAYVNISILDINDNSPKFLQNLYRINVNEDIFVGSKILDVKATDEDSDVNGLVTYNI 613
Query: 141 P--EDI-PFVVDANTGDIRTNKALDYEKQQLY 169
++I F++D G I ++ LD E Y
Sbjct: 614 ERGDNIGQFLIDPKNGTISVSRPLDRETISHY 645
Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG-LAVGRVHATDADEGQNAVVYYSVPEDI 144
A V I V D ND P+F + Y SV E + +++ +V ATDAD G N + Y + D
Sbjct: 40 ADVLIDVRDENDNYPKFDNTFYSASVAENSEKVISLVKVSATDADTGPNGDIRYYLESDT 99
Query: 145 P-----FVVDANTGDIRTNKALDYEKQQLYLERVF 174
F +D +G I +LD E Q Y +V
Sbjct: 100 ENIQNIFDIDIYSGWITLLTSLDREVQSEYNFKVI 134
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 55/146 (37%), Gaps = 31/146 (21%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------------ 70
+G ++ VKATD+DS GLV Y + D F +DP
Sbjct: 589 VGSKILDVKATDEDSDVNGLVTYNI--ERGDNIGQFLIDPKNGTISVSRPLDRETISHYT 646
Query: 71 -EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
E Q Q + ++ +NI + D ND P F S Y + E + G +DA
Sbjct: 647 LEIQACDQGDPQRCNSVPININILDTNDNAPIFSSANYSVVLQENRPLGYIFLTFKISDA 706
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD 154
DE P P+ D +G+
Sbjct: 707 DE---------TPNTTPYTFDIRSGN 723
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 20/113 (17%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------ 68
D+ FY A + E ++L++V ATD D+G G + Y L + + + F++D
Sbjct: 57 DNTFYSASVAENSEKVISLVKVSATDADTGPNGDIRYYLESDTENIQNIFDIDIYSGWIT 116
Query: 69 -ATEHQGPIQDEGGLSSTAT------------VNIRVTDINDKNPEFQSLPYE 108
T +Q E A V I++ D ND P F+ LP E
Sbjct: 117 LLTSLDREVQSEYNFKVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFK-LPIE 168
>gi|348520344|ref|XP_003447688.1| PREDICTED: protocadherin-1-like [Oreochromis niloticus]
Length = 1215
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 58/102 (56%), Gaps = 4/102 (3%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYS 139
LSST + ++VTDIND P F E EG Q G V + ATDAD G NA ++YS
Sbjct: 456 ALSSTNALKVQVTDINDNAPNFSPSTVEVDFAEGNQPGDKVLDIVATDADSGTNAELFYS 515
Query: 140 VPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
+ E F ++++TG++R N +LD E+++ Y RV K
Sbjct: 516 ITEPTARRLFKINSSTGEVRVNHSLDREEKERYEFRVIAADK 557
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 80/173 (46%), Gaps = 34/173 (19%)
Query: 38 ATDKDSGKFGLVEYRLLDNN-TDAASYFNLDPAT--EHQGP------------------- 75
ATD+DSG G+ +Y L + +DA F+L A E + P
Sbjct: 161 ATDRDSGSNGVADYSLSSSTGSDADQLFSLQVAVDAEEKLPQLVVMGNLDREMKDSYDLN 220
Query: 76 --IQDEGGLS--STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADE 130
+QD G S S+A + + VTD ND P+F+ YE +PE G +V +V A DAD
Sbjct: 221 IRVQDGGNPSRGSSALLRVTVTDQNDCTPKFEKSHYEADLPENSPPGHSVLQVKANDADT 280
Query: 131 GQNAVVYYSVPEDIPFV-----VDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N + YS+ + V +D TG + +D E++ + F++++
Sbjct: 281 GLNGEIDYSLHQASESVQRLLRIDRATGIVYVKGLVDREEENFL--KFFVVAR 331
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDADEGQNAVVYYSVP 141
+ TATV + V D ND +P+F Y FSV E L VG V DAD+ +N+ V V
Sbjct: 563 TGTATVVVNVLDCNDNDPKFTLNGYSFSVIENMPPLNPVGVVTVNDADKDENSQVRLFVE 622
Query: 142 EDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+D F++ TG I ++ + D EK+ Y
Sbjct: 623 QDNGMFLIQNGTGTILSSISFDREKKSTY 651
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 72/179 (40%), Gaps = 41/179 (22%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +++QVKA D D+G G ++Y L + +D AT E + ++
Sbjct: 267 GHSVLQVKANDADTGLNGEIDYSLHQASESVQRLLRIDRATGIVYVKGLVDREEENFLKF 326
Query: 78 -----DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA----------- 119
D G SS V + + D ND P + + DG+A
Sbjct: 327 FVVARDRGPNSKSSKVLVTVHIKDQNDNAPAIEI--RGIGLVTHHDGVANISEDMPIGTP 384
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD---------IRTNKALDYEKQQLY 169
V V +D DEG+NAVV V D+PF + + ++T LDYE+ + Y
Sbjct: 385 VALVQVSDRDEGENAVVTCVVAGDVPFQLRPASESANDRKRKYFLQTTTLLDYERIKDY 443
Score = 35.8 bits (81), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRV-HATDADEGQNAVVYYSV 140
I V DIND P+F S S+PE A+ + ATD D G N V YS+
Sbjct: 125 IEVLDINDNTPQFSSPILTLSIPENTHIGALFSIPMATDRDSGSNGVADYSL 176
>gi|326924388|ref|XP_003208410.1| PREDICTED: protocadherin-11 X-linked-like [Meleagris gallopavo]
Length = 1010
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 75/165 (45%), Gaps = 24/165 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G L ++ ATD DSG+ + Y L +DA FNLD T E Q
Sbjct: 482 GTQLTKISATDADSGRNAEISYIL---GSDAPPIFNLDRRTGILTAVRKLDREKQDRYSF 538
Query: 76 ---IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
+D G L + ATV + V D ND +P F Y F VPE VG + TDAD
Sbjct: 539 TVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLPMYGTVGLITVTDAD 598
Query: 130 EGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYLERV 173
G+NA V S+ F++D TG IR N D E+Q Y +V
Sbjct: 599 SGENAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQV 643
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
SSTA + + VTD+ND P F+ E S+PE G +V ++HATDAD G NA +++
Sbjct: 230 SSTAILQVTVTDVNDNRPVFKENDIEVSIPENAPVGTSVSQLHATDADLGSNAQIHFYFS 289
Query: 142 EDIP------FVVDANTGDIRTNKALDYEKQQLY 169
I F +D TG I + LD E+ ++
Sbjct: 290 NQISSLAKKLFAIDNATGLITIREPLDREESPVH 323
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 20/169 (11%)
Query: 21 AMARDKHELGVTLMQVKATDKDS---GKFGL-----VEYRL---LDNN--TDAASYFNLD 67
+ +K L + + DKD+ GK V +RL DN + A++ + +
Sbjct: 368 VLLSEKAPLNTKIALITVMDKDADLNGKVTCFTDHDVPFRLKPVFDNQFLLETATFLDYE 427
Query: 68 PATEHQGPI--QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
E+ I D G L+ +A + I++ D ND P F S+PE G + +
Sbjct: 428 STREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPENNAPGTQLTK 487
Query: 123 VHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+ ATDAD G+NA + Y + D P F +D TG + + LD EKQ Y
Sbjct: 488 ISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTAVRKLDREKQDRY 536
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 55/132 (41%), Gaps = 27/132 (20%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ--- 77
T+ + TD DSG+ V +L+ + F +DP T E QG
Sbjct: 588 TVGLITVTDADSGENAAVTLSILNGRDN----FIIDPLTGVIRPNITFDREQQGSYTFQV 643
Query: 78 ---DEGGL--SSTATVNIRVTDINDKNPEF----QSLPYEFSVPEGQDGLAVGRVHATDA 128
D G L SSTA V I V D+ND P F + YE G V +V A D
Sbjct: 644 KAVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSSSPGSVVTKVFAVDN 703
Query: 129 DEGQNAVVYYSV 140
D G NA + YS+
Sbjct: 704 DTGMNAELRYSI 715
>gi|403256576|ref|XP_003920945.1| PREDICTED: protocadherin beta-8-like [Saimiri boliviensis
boliviensis]
Length = 1087
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY + +G +++V ATD D+G G + Y L + + + F +D T
Sbjct: 740 FYRVQISEDSPIGFLVIKVSATDADTGVNGEISYSLFQASDEISKTFKVDSLTGEIRLEK 799
Query: 71 ----------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
E +D GG S TV I+V D+ND PE + +PE V
Sbjct: 800 QLDFEKLHSYEINIEARDAGGFSGKCTVLIQVMDVNDHAPEVTMSAFTSPIPENAPETVV 859
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
D D +N + S+ +D+PF++ ++ G+ + T + LD E + Y
Sbjct: 860 ALFSVLDLDSEENGKISCSIQDDLPFLLKSSVGNFYTLLTERPLDRESKAEY 911
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
S TA V + V D ND PEF+ Y + E G V +V ATDAD G N + YS+
Sbjct: 717 SGTAQVYVEVVDFNDNAPEFEQPFYRVQISEDSPIGFLVIKVSATDADTGVNGEISYSLF 776
Query: 141 --PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
++I F VD+ TG+IR K LD+EK Y
Sbjct: 777 QASDEISKTFKVDSLTGEIRLEKQLDFEKLHSY 809
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 70/172 (40%), Gaps = 20/172 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY-------RLLD----NNTDAASYF-- 64
Y A + +G ++ V A D D+G G + Y R+L N+T Y
Sbjct: 246 LYEVQAPENSPVGSMVVSVSARDLDTGSNGEIAYAFFYATERILKTFQLNSTSGNLYLKS 305
Query: 65 --NLDPATEHQGPIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
+ + + IQ D GGLS TV + VTD+ND PE +PE V
Sbjct: 306 ELDYEAIQTYTLTIQAKDGGGLSGKCTVVVEVTDVNDNQPELLLSSLNSPIPENSPETVV 365
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
D D G N S+ +D+PF++ + + T K LD E+ Y
Sbjct: 366 AVFRIRDRDSGNNGKTVCSIQDDLPFILKPSVESFYTLVTEKPLDRERNTDY 417
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN---AVVYY 138
S TA V+I V DIND PEF YE PE G V V A D D G N A ++
Sbjct: 223 SGTALVHIMVVDINDNAPEFVQSLYEVQAPENSPVGSMVVSVSARDLDTGSNGEIAYAFF 282
Query: 139 SVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
E I F +++ +G++ LDYE Q Y
Sbjct: 283 YATERILKTFQLNSTSGNLYLKSELDYEAIQTY 315
>gi|297709181|ref|XP_002831320.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1-like
[Pongo abelii]
Length = 1157
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 24/174 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA------------ASYFNL 66
Y R+ E+G ++ ++A+D+DS + YR+L D + +
Sbjct: 307 YRERVRENLEVGYEVLTIRASDRDSPINANLRYRVLGGAWDVFQLNESSGVVSTRAVLDR 366
Query: 67 DPATEHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-- 118
+ A E+Q ++ + G LS+TATV I V D ND P+F Y VPE GL
Sbjct: 367 EEAAEYQLLVEANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNYVVQVPE-DVGLNT 425
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLY 169
AV RV ATD D+GQNA ++YS+ F + + +G + LD+E Q Y
Sbjct: 426 AVLRVQATDRDQGQNAAIHYSILSGNVAGQFYLHSLSGILDVINPLDFEDVQKY 479
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQ-- 73
+G +++ ++A D+D+ ++ Y+L NT + LD E Q
Sbjct: 651 VGSSVLTLQARDRDANS--VITYQLTGGNTRNRFALSSQRGGGLITLALPLDYKQEQQYV 708
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G S TA V I +TD N P FQS Y SV E + G ++ + A D D G
Sbjct: 709 LAVTASDGTRSHTAHVLINITDANTHRPVFQSSHYTVSVSEDRPVGTSIATLSANDEDTG 768
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + +P F +D ++G + T LDYE Q Y
Sbjct: 769 ENARITYVIQDPVPQFRIDPDSGTMYTMMELDYENQVAY 807
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 39/180 (21%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN--------LDP-----ATEHQGP 75
L +++V+ATD+D G+ + Y +L N Y + ++P ++
Sbjct: 423 LNTAVLRVQATDRDQGQNAAIHYSILSGNVAGQFYLHSLSGILDVINPLDFEDVQKYSLS 482
Query: 76 IQDEGG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
I+ + G ++S+ V+++V D+ND P F S P++ +V E G V + A DAD
Sbjct: 483 IKAQDGGRPPLINSSGVVSVQVLDVNDNEPIFVSSPFQATVLENVPLGYPVVHIQAVDAD 542
Query: 130 EGQNAVVYYSV--------------PE------DIPFVVDANTGDIRTNKALDYEKQQLY 169
G+NA ++Y + P+ D PF + ++G I LD E+ + Y
Sbjct: 543 SGENARLHYRLVNTASAFLGGGSAGPKNPAPTPDFPFQIHNSSGWITVCAELDREEVEHY 602
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 31/166 (18%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ-------------- 77
+++QV A D+DSG G + Y + ++ ++P + G I+
Sbjct: 859 SILQVSAMDRDSGPNGRLLYTFQGGDDGDGDFY-IEPTS---GVIRTQRRLDRENVAVYN 914
Query: 78 ------DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
D G LS++ + + + DIND P F+ E V E G V ++ A D
Sbjct: 915 LWALAVDRGSPTPLSASVEIQVTILDINDNAPMFEKDELELFVEENNPVGSVVAKIRAND 974
Query: 128 ADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
DEG NA + Y + E D+ F +D GD+R LD+E ++ Y+
Sbjct: 975 PDEGPNAQIMYQIVEGDMRHFFQLDLLNGDLRAMVELDFEVRREYV 1020
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 74/178 (41%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y + +G ++ + A D+D+G+ + Y + D F +DP +
Sbjct: 740 SSHYTVSVSEDRPVGTSIATLSANDEDTGENARITYVI----QDPVPQFRIDPDSGTMYT 795
Query: 71 ------EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E+Q QD G S T T+ I + D ND P+F Y+ S+ E
Sbjct: 796 MMELDYENQVAYTLTIMAQDNGIPQKSDTTTLEILILDANDNAPQFLWDFYQGSIFEDAP 855
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ +V A D D G N + Y+ D F ++ +G IRT + LD E +Y
Sbjct: 856 PSTSILQVSAMDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRENVAVY 913
>gi|195591705|ref|XP_002085579.1| GD14851 [Drosophila simulans]
gi|194197588|gb|EDX11164.1| GD14851 [Drosophila simulans]
Length = 2585
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 72/167 (43%), Gaps = 28/167 (16%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD--------------------AASYFNLD 67
+L + +V A DKD G ++Y L+ N D S FNL
Sbjct: 1392 QLNTLITKVHAMDKDFGVNRQIKYSLMGENHDYFKISKSTGIIRLDKSLDRETISLFNLT 1451
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHAT 126
E G + L S ATV + + DIND PEF Y + E G V +V+AT
Sbjct: 1452 VKAEDCGVPK----LHSIATVAVNILDINDNPPEFSMRQYSCKILENATHGTEVCKVYAT 1507
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D G NA ++Y + E F +D+ TGD+ N LDYE + Y
Sbjct: 1508 SIDIGVNADIHYFIMSGNEQGKFKMDSTTGDLVLNATLDYEMSKFYF 1554
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--F 146
I V DIND P F Y SVPE Q + +VHA D D G N + YS+ + F
Sbjct: 1366 ITVNDINDNTPIFSMAQYRVSVPEDAQLNTLITKVHAMDKDFGVNRQIKYSLMGENHDYF 1425
Query: 147 VVDANTGDIRTNKALDYEKQQLY 169
+ +TG IR +K+LD E L+
Sbjct: 1426 KISKSTGIIRLDKSLDRETISLF 1448
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS 139
G+ + +++ + D+ND PE +S Y ++PE G + +++ATD D G NA + Y
Sbjct: 529 GVYAEVVLSVSIMDVNDCYPEIESDIYNITIPENASFGTQILKINATDKDSGANAKLSYY 588
Query: 140 VPEDIP-------FVVDANTGDIRTNKALDYEK 165
+ E I F +D G++ LDYE+
Sbjct: 589 I-ESINGQNNSELFYIDVTDGNLYLKTPLDYEQ 620
Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LS+ A VNI + DIND +P+F Y +V E G + V ATD D N +V Y++
Sbjct: 1567 LSNNAYVNISILDINDNSPKFLQNLYRINVNEDIFVGSKILDVKATDEDSDVNGLVTYNI 1626
Query: 141 P--EDI-PFVVDANTGDIRTNKALDYEKQQLY 169
++I F VD G I ++ LD E Y
Sbjct: 1627 ERGDNIGQFSVDPKNGTISVSRPLDRETISHY 1658
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 64/166 (38%), Gaps = 24/166 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
+Y ++ D + G +MQVKA D DS + G V Y L N F LD T Q
Sbjct: 354 YYATVSIDDPK-GTIIMQVKAVDLDSAENGEVRYELKKGN---GELFKLDRKTGELSIKQ 409
Query: 78 DEGG------------------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
G SS A + ++V I+ P F+ Y SV E + +
Sbjct: 410 HVEGHNRNYELTVAAYDGAITPCSSEAPLQVKV--IDRSMPVFEKQFYTVSVKEDVEMYS 467
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEK 165
V +++Y + F +D NTG I LDYEK
Sbjct: 468 ALSVSIEAESPLGRSLIYTISSDSQSFEIDYNTGSIFVVNELDYEK 513
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 37 KATDKDSGKFGLVEYRLLDNN----------TDAASYFNLDPATEHQGPIQD----EGGL 82
KA DKD +EY+++ N T S N+ T+ + + +G
Sbjct: 681 KAYDKDISDTDSLEYKIVYGNELQTYSINKLTGVISLQNMLNFTDKSSTVLNISVSDGVH 740
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS-V 140
++ A + I + N +P+F YE VPE G + V A+D D G A +YY V
Sbjct: 741 TAYARLKISLLPENVYSPQFDQSTYEAQVPENLLHGHNIITVKASDGDFGTYANLYYEIV 800
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLYL 170
E++ F++D +TG I + D EK+ Y+
Sbjct: 801 SEEMKKIFLIDQSTGVITSKVTFDREKKDEYV 832
Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 51/129 (39%), Gaps = 22/129 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------------ 70
+G ++ VKATD+DS GLV Y + D F++DP
Sbjct: 1602 VGSKILDVKATDEDSDVNGLVTYNI--ERGDNIGQFSVDPKNGTISVSRPLDRETISHYT 1659
Query: 71 -EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
E Q Q + ++ +NI + D ND P F S Y + E + G +DA
Sbjct: 1660 LEIQACDQGDPQRCNSVPININILDTNDNAPIFSSANYSVVLQENRPLGYIFLTFKISDA 1719
Query: 129 DEGQNAVVY 137
DE N Y
Sbjct: 1720 DEAPNTTPY 1728
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG-LAVGRVHATDADEGQNAVVYYSVPEDI 144
A V I V D ND P+F + Y SV E + +++ +V ATDAD G N + Y + D
Sbjct: 1053 ADVFIDVRDENDNYPKFDNTFYSASVAENSEKVISLVKVSATDADTGPNGDIRYYLESDT 1112
Query: 145 P-----FVVDANTGDIRTNKALDYEKQQLYLERVF 174
F +D +G I +LD E Q Y +V
Sbjct: 1113 ENIQNIFDIDIYSGWITLLTSLDREVQSEYNFKVI 1147
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 14/101 (13%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVH----------ATDADEG 131
SS + I + D ND P F Y ++ E G V +VH DAD G
Sbjct: 5 SSCQNIIIHILDANDNIPYFVQNEYVGALSESAAIGSYVLKVHDSSKDHLTLQVKDADVG 64
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
N +V Y + +D+ F +D+ TG I + LDYE Y
Sbjct: 65 VNGMVEYHIVDDLAKNFFKIDSTTGAIELLRQLDYETNAGY 105
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 20/113 (17%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------ 68
D+ FY A + E ++L++V ATD D+G G + Y L + + + F++D
Sbjct: 1070 DNTFYSASVAENSEKVISLVKVSATDADTGPNGDIRYYLESDTENIQNIFDIDIYSGWIT 1129
Query: 69 -ATEHQGPIQDEGGLSSTAT------------VNIRVTDINDKNPEFQSLPYE 108
T +Q E A V I++ D ND P F+ LP E
Sbjct: 1130 LLTSLDREVQSEYNFKVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFK-LPIE 1181
>gi|443690606|gb|ELT92691.1| hypothetical protein CAPTEDRAFT_219637 [Capitella teleta]
Length = 1103
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 81/177 (45%), Gaps = 27/177 (15%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------ 70
L Y R+ + + + +++V ATD+D GK + Y L N D + +DP +
Sbjct: 471 LNYSRSLRENNTINMPILRVNATDRDEGKNAQITYSLSSNARD---FLAIDPQSGVIATR 527
Query: 71 -----------EHQGPIQDEGGLSSTATVNI--RVTDINDKNPEFQSLPYEFSVPEGQ-D 116
+ Q D G +S +T N+ ++TDIND+ P F Y F E Q +
Sbjct: 528 AVFDFEEMKTFQFQVVATDHGDVSEFSTTNVLLKITDINDEAPLFHEPGYNFGTFENQSN 587
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPE---DIP-FVVDANTGDIRTNKALDYEKQQLY 169
G +G V A+D DE YS+ E DI F ++ TG I T + LD E Q Y
Sbjct: 588 GTEIGTVSASDMDEPPFNSFTYSLDESQGDIDVFEINKITGRITTKRVLDREHQSAY 644
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 68/166 (40%), Gaps = 37/166 (22%)
Query: 38 ATDKDSGKFGLVEYRL----------LDNNTDA-----------------ASYFNLDPAT 70
A D DSG +G+ +YR + NNTD ASY + A
Sbjct: 161 AQDPDSGSYGVQDYRFNTDSDKFDLEVRNNTDGSFDLRLTLIKGLDRETQASYSMVVTAY 220
Query: 71 EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ Q + G T + + V D ND +P F YE SV E G + RVHATD D
Sbjct: 221 DGGDRGQKKSG---TLQIKVNVVDANDNSPVFDQEVYESSVSEDVPSGTTITRVHATDLD 277
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEKQQLY 169
+N + YS+ F V+ TGDI ALDYE Y
Sbjct: 278 IDRNGQIVYSLSSQTLTKYPDAFGVNNATGDIYVFTALDYETIDSY 323
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 23/194 (11%)
Query: 7 PSALEMTSDSLFYGAMA---RDKHELGVTLMQV---KATDKDSGKFGLVEYRLLDNNTDA 60
P +E +F M RDK G T+ V A D + Y++L +
Sbjct: 368 PQVMENALPGVFVAQMNVQDRDKGVSGQTMCDVDPASAADFEIQHLYKSMYKILTKRS-- 425
Query: 61 ASYFNLDPATEHQGPIQ--DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
F+ + + E+ IQ D+G L++ T + + D ND P+F L Y S+ E
Sbjct: 426 ---FDREVSPEYNLSIQCSDKGDPQLTAGVTYKVLILDANDNAPQFLKLNYSRSLRENNT 482
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ + RV+ATD DEG+NA + YS+ + +D +G I T D+E+ + + +V
Sbjct: 483 INMPILRVNATDRDEGKNAQITYSLSSNARDFLAIDPQSGVIATRAVFDFEEMKTFQFQV 542
Query: 174 FL-----ISKFATS 182
+S+F+T+
Sbjct: 543 VATDHGDVSEFSTT 556
>gi|47216287|emb|CAF96583.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3280
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 81/192 (42%), Gaps = 46/192 (23%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLL----------DNNTDAASYFNLDP--------A 69
E+G L + A D D G+ GLV Y +L + NT F L P +
Sbjct: 1541 EVGSLLHRFVAKDGDEGENGLVSYTILTGNKKGMFTLEGNTGKMPLFCLHPLCFSVLNLS 1600
Query: 70 TEHQGP----------------------IQDEG--GLSSTATVNIRVTDINDKNPEFQSL 105
H P D G LSST T + V D+ND+ P F
Sbjct: 1601 CLHFSPGLLFLASALDYESQRLHRLIVEAVDHGLPSLSSTQTFTVEVADVNDQPPVFSQS 1660
Query: 106 PYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL 161
Y SV E +D G V RV ATD D +NAVV+YS+ P F ++ +TG I T L
Sbjct: 1661 VYNASVAENKDPGEPVARVSATDGDSEENAVVWYSLLPGPGYELFSINPDTGLITTASYL 1720
Query: 162 DYEKQQLYLERV 173
D E+Q + RV
Sbjct: 1721 DREQQHGFTLRV 1732
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 87/178 (48%), Gaps = 25/178 (14%)
Query: 14 SDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN--------NTDA----- 60
S S++ ++A +K + G + +V ATD DS + +V Y LL N D
Sbjct: 1658 SQSVYNASVAENK-DPGEPVARVSATDGDSEENAVVWYSLLPGPGYELFSINPDTGLITT 1716
Query: 61 ASYFNLDPATEHQGPIQ----DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
ASY LD +H ++ D G LS+TATV V D ND P F + S+PE
Sbjct: 1717 ASY--LDREQQHGFTLRVQARDSGPRPLSATATVLCSVLDDNDNPPAFMQSSFRISLPEN 1774
Query: 115 QDGLAVGRVHATDADEGQNAVVYYS-VPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
A+ A+D D G+N + YS V ED F V++ +G + T K LD E++Q Y
Sbjct: 1775 LPPGAIHTAQASDPDLGENGTILYSIVGEDCAGCFTVNSRSGVVSTTKVLDREEKQNY 1832
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 72/168 (42%), Gaps = 24/168 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD--NNTDAASYFNLDPA------ 69
YGA + +G +QV ATD DS FG + Y L D + D F++ P
Sbjct: 556 LYGASVPEHSAVGSCFLQVVATDADSPAFGTLLYSLSDGFDGQDQHPLFHVHPQSGELCV 615
Query: 70 ----------TEHQGPI--QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQD 116
T H I +D GGLS+ V++ V D+ND P F Y S+ Q
Sbjct: 616 SQDIDRDSGQTVHDLLIRAEDPGGLSAQTYVHVEVEDLNDNAPVFNPDEYTVSISGHAQP 675
Query: 117 GLAVGRVHATDADEGQ-NAVVYYSVPEDIP--FVVDANTGDIRTNKAL 161
G V V ATD D G+ V Y +P D+ F VD TG + L
Sbjct: 676 GAEVLNVIATDRDSGRFGQVTYGIIPGDMSSLFDVDPQTGTLTLTSPL 723
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV 140
LSS+ + + + D ND P F Y+ SV EG G V RV A D DEG N V YS+
Sbjct: 1846 LSSSTQLQLVLLDRNDNAPSFSRKSYQASVSEGLPPGAEVLRVSAFDPDEGPNGRVTYSL 1905
Query: 141 PEDI---PFVVDANTGDIRTNKALDYEKQQLYLER 172
ED F VD+ TG IRT LD E + Y R
Sbjct: 1906 TEDSSQGAFSVDSLTGVIRTTGPLDRESRAQYTLR 1940
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 78/166 (46%), Gaps = 31/166 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTD-----------AASYFNLDPATEHQGP--- 75
G +L+Q++A D D G G V Y +L +N D A+ LD + Q
Sbjct: 463 GSSLIQLQARDADEGPNGAVRYSILRSNQDRLVSIEPESGLVATAAPLDRESLEQLWFLV 522
Query: 76 IQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVG----RVHATDA 128
+ +GG LSSTATV ++V D+ND P FQ Y SVPE AVG +V ATDA
Sbjct: 523 VAADGGEPSLSSTATVTVQVLDVNDNEPVFQRQLYGASVPEHS---AVGSCFLQVVATDA 579
Query: 129 DEGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYEKQQ 167
D + YS+ + F V +G++ ++ +D + Q
Sbjct: 580 DSPAFGTLLYSLSDGFDGQDQHPLFHVHPQSGELCVSQDIDRDSGQ 625
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV 140
LSS +RVTD ND +P+F+ Y SVPE G ++ ++ A DADEG N V YS+
Sbjct: 427 LSSEVVFLLRVTDANDCHPQFEKDAYTVSVPEDVPQGSSLIQLQARDADEGPNGAVRYSI 486
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEK-QQLYL 170
+D ++ +G + T LD E +QL+
Sbjct: 487 LRSNQDRLVSIEPESGLVATAAPLDRESLEQLWF 520
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 79 EGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNA 134
+GG+ + T + I V D ND P F Y SVPE ++ V +VHATD D G N
Sbjct: 205 DGGVPPRTGTLQLRIHVLDENDNPPVFNQTEYHASVPEDAPLMSPVCQVHATDLDLGDNG 264
Query: 135 VVYYSVPE-----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+ Y + D F ++ +G + NK LDYE Q +
Sbjct: 265 RITYEINRRQSDPDRVFSINRTSGVVYVNKPLDYEAQAFH 304
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 76 IQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSV-----PEGQDGLAVGRVHATDA 128
+ D+G L++TATV+I VTD ND P+F LP V E G V + A D
Sbjct: 1172 VTDQGHPRLNATATVHILVTDTNDNTPQFMHLPASKEVNVQIWAEIPAGSLVANMFAKDL 1231
Query: 129 DEGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLY 169
D G+N V +S+ E F +D TG+IRT + + Y
Sbjct: 1232 DAGENGTVTFSLASEDEGEPPHFEIDGETGNIRTTEHFTRNTRPFY 1277
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 23/158 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN---------------LDPATEHQGPIQ 77
+MQ+ A+D DSG G +EY ++ + + A + + P+ +
Sbjct: 2195 VMQMFASDADSGINGQIEYSIVSGDPNEAFILDSVRGILATSIPLDREITPSYKLVLQAA 2254
Query: 78 DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAV 135
D+G LSSTATV ++V D+ND +P + G V +V A D D ++
Sbjct: 2255 DQGDPPLSSTATVRVQVVDVNDNSPAIPHMEPVVIAENRPAGHTVTQVTANDVD--LSST 2312
Query: 136 VYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ Y + PF ++ TG + +ALDYE+Q Y
Sbjct: 2313 IRYSLSGNSSLGSPFAINQYTGVVSLTRALDYEEQAEY 2350
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 74/167 (44%), Gaps = 23/167 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN-----------------TDAA 61
Y A ++ G+ + +V+A+ ++G V Y + N D A
Sbjct: 2078 YNATIKENSGAGILVTKVEAS-GEAGSRQSVVYTIFSGNENSLFSINHHTGEIRVQKDYA 2136
Query: 62 SYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAV 120
F L P H + D G ++ V+I + D+ND P F+ Y +V EGQ V
Sbjct: 2137 LDFELSPHI-HLVVLADNGLQTTHCRVSIHLLDVNDNAPRFERSSYRTAVWEGQAHNTYV 2195
Query: 121 GRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
++ A+DAD G N + YS+ P F++D+ G + T+ LD E
Sbjct: 2196 MQMFASDADSGINGQIEYSIVSGDPNEAFILDSVRGILATSIPLDRE 2242
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 70/187 (37%), Gaps = 38/187 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------- 71
Y A + G L+QV A D D G LV + ++ N+ ++ LDP +
Sbjct: 2607 YHAQVSESSPRGTRLVQVSARDPDLGANSLVRFDIISGNSKG--HYKLDPESGLLAVNQS 2664
Query: 72 ---HQGP-------IQDEGGLSST-----ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
Q P D G S A V I V D ND +P F SV E
Sbjct: 2665 LDYEQDPKYILTVRASDGGEFSEKHQVAFAVVFITVLDENDNSPHFVFSTVNCSVLENLP 2724
Query: 117 GLA-VGRVHATDADEGQNAVVYYSV------------PEDI-PFVVDANTGDIRTNKALD 162
VHA D D G + YS+ PE F +D TGD+ T + D
Sbjct: 2725 AFTHTCSVHAVDNDLGSYGQLTYSILSPCFLDYDSGSPEKKEAFAIDPLTGDVHTRQTFD 2784
Query: 163 YEKQQLY 169
YE++ Y
Sbjct: 2785 YERESEY 2791
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 17/98 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDP--ATEHQGPIQ-----D 78
++ V ATD+DSG G + YRLL + D+ + F P AT + I
Sbjct: 2400 VLSVSATDRDSGPNGEITYRLLSSPLQGFYIQADSGAIFTNKPIKATANGNLIHLLVEAK 2459
Query: 79 EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
+GG LSS A+V++++ D ND P F Y ++PE
Sbjct: 2460 DGGDPALSSVASVDVQILDTNDHVPTFHQEVYSLTIPE 2497
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 63/147 (42%), Gaps = 27/147 (18%)
Query: 36 VKATDKDSGKFGLVEYRLLD--------NNTDAASYFNLDPAT-----------EHQGP- 75
V A D D G +G + Y +L + + F +DP T E +
Sbjct: 2732 VHAVDNDLGSYGQLTYSILSPCFLDYDSGSPEKKEAFAIDPLTGDVHTRQTFDYERESEY 2791
Query: 76 -----IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDAD 129
+D+GG ++T V + + +++ +P F Y F +P + G VG V A D D
Sbjct: 2792 CFVVEARDKGGKTATVRVQVSIRGVDEFSPIFTQKQYHFLLPGHSKPGDVVGFVMAMDHD 2851
Query: 130 EGQNAVVYYSVPEDIPFV-VDANTGDI 155
G + +V YS+ PF V+ TG +
Sbjct: 2852 RGVDGIVGYSLVSSSPFFSVNKTTGSV 2878
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 24/152 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQDE------- 79
G +++V A D D G G V Y L ++++ A F++D T GP+ E
Sbjct: 1882 GAEVLRVSAFDPDEGPNGRVTYSLTEDSSQGA--FSVDSLTGVIRTTGPLDRESRAQYTL 1939
Query: 80 ----------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDA 128
G L+S A+V ++V D+ND P P V V V A D+
Sbjct: 1940 RAVATDGCTQGPLTSVASVTVQVEDVNDNVPICDQNPVNAWVSARTLPNQIVATVTAEDS 1999
Query: 129 DEGQNAVVYYSVP-EDIPFVVDANTGDIRTNK 159
D+G+N + +++ E+ F ++ TG+I +
Sbjct: 2000 DQGENGTIQFALSDEENLFDINRETGEISVRR 2031
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE 142
ST VNI VTD+ND P F SV + G + HA DAD G N V Y +
Sbjct: 852 STTQVNIAVTDVNDNAPVFLRASDAVSVSQNVLPGTVLYIAHAHDADSGSNGRVRYRLRN 911
Query: 143 DI--PFVVDANTGDIRTNKALDYEKQQLY 169
D F +D N G + ++L +QQ Y
Sbjct: 912 DRFGTFGIDRNLGTVTLIQSLLGSRQQSY 940
Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
L+S+A V + V D ND P F S Y V E G + +V A D D G N++V + +
Sbjct: 2582 LNSSAVVMLTVADRNDNAPVFSSTEYHAQVSESSPRGTRLVQVSARDPDLGANSLVRFDI 2641
Query: 141 PEDIP---FVVDANTGDIRTNKALDYEKQQLYL 170
+ +D +G + N++LDYE+ Y+
Sbjct: 2642 ISGNSKGHYKLDPESGLLAVNQSLDYEQDPKYI 2674
Score = 35.8 bits (81), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 92 VTDINDKNPEFQSLPYEFSVPEGQD--GLAVGRVHATDADEGQNAVVYYSVPEDIPFV-V 148
V D+ND P F Y F+V E GL VG V A D D G+NA + Y + D F +
Sbjct: 1063 VLDVNDNAPVFSRDLYYFTVSEAPSPQGL-VGTVSAADKDSGRNAQLSYILLSDGKFFRI 1121
Query: 149 DANTG 153
+A TG
Sbjct: 1122 NAKTG 1126
>gi|348525992|ref|XP_003450505.1| PREDICTED: protocadherin-1-like [Oreochromis niloticus]
Length = 1218
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 85/166 (51%), Gaps = 22/166 (13%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQ 73
++++ G ++ V ATD DSG + Y +L +++ F +DP T EH+
Sbjct: 509 EENQPGEKILDVIATDADSGTNAELLYNILPDSS-IKGLFEIDPNTGEVRAKSSLDREHK 567
Query: 74 GPIQ------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVH 124
+ D+G TATV I+V D ND +P+F Y FSV E L+ VG V
Sbjct: 568 EQYEFRVTAADKGSPVHKGTATVVIKVIDRNDNDPKFMLSGYSFSVLENMPPLSPVGMVT 627
Query: 125 ATDADEGQNAVVYYSV-PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D D+G+NA V+ SV P++ FVV TG I ++ + D EK+ Y
Sbjct: 628 VLDMDKGENARVHLSVEPDEGKFVVQNGTGTILSSISFDREKESSY 673
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFS-VPEGQDGLAVGRVHATDADEGQNAVVYYS 139
LSST ++ ++VTD+ND +P F +E E Q G + V ATDAD G NA + Y+
Sbjct: 477 ALSSTNSLKVQVTDVNDNSPVFSPTLFEVDFAEENQPGEKILDVIATDADSGTNAELLYN 536
Query: 140 VPEDIP----FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ D F +D NTG++R +LD E ++ Y RV
Sbjct: 537 ILPDSSIKGLFEIDPNTGEVRAKSSLDREHKEQYEFRV 574
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 88/197 (44%), Gaps = 41/197 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGP 75
Y A + +G +++QVKA D D G G +EY L +D +T +GP
Sbjct: 277 YEAEVSENSPVGHSVLQVKANDFDMGPNGEIEYTLHQAVDPVPKLLRIDRSTGIIYVKGP 336
Query: 76 I--------------QDEGGL--SSTATVNIRVTDINDKNP--EFQSLPYEFSVPEG--- 114
+ +D+G SS V I VTD ND P E + + + EG
Sbjct: 337 LDREEISSLSFYVIARDKGPQPKSSKTFVTIEVTDQNDNAPAVEIRGIGL-VTHSEGVAN 395
Query: 115 --QD---GLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDA---NTGD------IRTNKA 160
+D G AV V +D DEG+NAVV V D+PF + +T D ++T
Sbjct: 396 ISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSTSDNKRKYFLQTTTP 455
Query: 161 LDYEKQQLYLERVFLIS 177
LDYE+ + Y RV +++
Sbjct: 456 LDYERVRDY--RVEIVA 470
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 71/159 (44%), Gaps = 32/159 (20%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD------------------- 78
ATD+DS + G+ +Y L DAA+ F L A + G +
Sbjct: 184 ATDRDSDRNGVADY-ALTAGPDAATLFGLQVADDRGGKLPQLIVLGNLDRELKDSYDLTI 242
Query: 79 ---EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+GG S+A + + VTD ND P+F++ YE V E G +V +V A D D G
Sbjct: 243 KAVDGGNPQRYSSALLRVVVTDANDNAPKFETSTYEAEVSENSPVGHSVLQVKANDFDMG 302
Query: 132 QNAVVYYSVPEDIPFV-----VDANTGDIRTNKALDYEK 165
N + Y++ + + V +D +TG I LD E+
Sbjct: 303 PNGEIEYTLHQAVDPVPKLLRIDRSTGIIYVKGPLDREE 341
>gi|291407996|ref|XP_002720203.1| PREDICTED: protocadherin 11 X-linked isoform 4 [Oryctolagus
cuniculus]
Length = 1332
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 80/174 (45%), Gaps = 26/174 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
F + + G L ++ ATD DSG+ + Y L TDA FNLD T
Sbjct: 470 FISISVPENNSPGTQLTKISATDADSGRNAEINYLL---GTDAPPEFNLDHRTGILTAVK 526
Query: 71 ----EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--QD 116
E Q +D G L + ATV + V D ND +P F Y F VPE +
Sbjct: 527 KLDREKQEKYYFTVLAKDNGIPPLITNATVLVTVLDQNDNSPIFTHNEYNFYVPENLPRH 586
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLY 169
G VG + TD D G+N+ V S+ + + F +D TG IR N + D EKQ+ Y
Sbjct: 587 G-TVGLITVTDPDYGENSAVTLSIVDVNDEFTIDPQTGVIRPNISFDREKQESY 639
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+ ++ + ++V D ND P F SVPE G + ++ ATDAD G+NA + Y +
Sbjct: 446 LNQSSMLLVKVKDENDNAPVFTQPFISISVPENNSPGTQLTKISATDADSGRNAEINYLL 505
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
D P F +D TG + K LD EKQ+ Y
Sbjct: 506 GTDAPPEFNLDHRTGILTAVKKLDREKQEKY 536
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 10/98 (10%)
Query: 78 DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
++GG SSTA + + V D ND P F+ E S+PE G +V ++HATDAD G+N
Sbjct: 222 EDGGFPQRSSTAILQVSVADTNDNRPVFKENEIEVSIPENAPVGTSVTQLHATDADIGEN 281
Query: 134 AVVYYSVPEDIP------FVVDANTGDIRTNKALDYEK 165
A +++ + F ++ TG I + LD E+
Sbjct: 282 AKIHFYFSNLVSNIAKRLFHLNTTTGLITVKEPLDREE 319
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 64/150 (42%), Gaps = 30/150 (20%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP---------------I 76
T+ + TD D G+ V ++D N + F +DP T P +
Sbjct: 588 TVGLITVTDPDYGENSAVTLSIVDVNDE----FTIDPQTGVIRPNISFDREKQESYTFYV 643
Query: 77 QDEGG----LSSTATVNIRVTDINDKNPEFQSLP----YEFSVPEGQDGLAVGRVHATDA 128
+ E G SSTA V I V D+ND P F P YE +P G V +V A D
Sbjct: 644 KAEDGGRVSRSSTAKVTINVVDVNDNKPVFVIPPSNYSYELVLPSTNPGAVVFQVVAVDN 703
Query: 129 DEGQNAVVYYSVPEDIP---FVVDANTGDI 155
D G NA + YS+ F++D +G+I
Sbjct: 704 DTGMNAEIRYSIAGGNAKGLFIIDQTSGNI 733
Score = 35.8 bits (81), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 30/175 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEY-----------RLLDNNTDAASYFNLDPATEHQGPIQ 77
+G ++ Q+ ATD D G+ + + RL NT +P + P
Sbjct: 264 VGTSVTQLHATDADIGENAKIHFYFSNLVSNIAKRLFHLNTTTGLITVKEPLDREEAPSH 323
Query: 78 -------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA--------VGR 122
D G + + A V + VTDIND P + Y + G L+ V
Sbjct: 324 KLLVLATDGGSMPARAMVLVNVTDINDNVPSID-IRYIINPTNGTVVLSENAPLNTKVAL 382
Query: 123 VHATDADEGQNAVVYYSVPEDIPF---VVDANTGDIRTNKALDYEKQQLYLERVF 174
+ TD D N V ++PF V +N + T LDYE + Y ++
Sbjct: 383 ITVTDKDADHNGRVTCFTDHEVPFRLRPVFSNQFLLETAAYLDYESTREYAIKLL 437
>gi|194758587|ref|XP_001961543.1| GF15021 [Drosophila ananassae]
gi|190615240|gb|EDV30764.1| GF15021 [Drosophila ananassae]
Length = 5182
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 79/163 (48%), Gaps = 25/163 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------------ATEH 72
E+G T+ ++A D DS G V ++L+D + D F L+P +++
Sbjct: 1838 EIGHTIATLRAHDPDS--LGTVTFKLMDGHDDK---FLLEPISGKLVLKDSLDRETKSKY 1892
Query: 73 QGPIQDEGGLSSTAT-VNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADE 130
+ I+ G+ T T I V+D ND P F+ Y F +PE G VG++ A DAD
Sbjct: 1893 ELRIRVSDGIQYTETYATIEVSDTNDNPPVFEETVYSFDIPENAPRGYQVGQILAKDADL 1952
Query: 131 GQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYL 170
GQNA V Y V D F ++ TG + LDYE+ Q Y+
Sbjct: 1953 GQNAQVSYGVFSDWATDIFSLNPQTGMLTLTSRLDYEEVQHYI 1995
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 18/172 (10%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDN------------NTDAASYFNLDPATEHQGP 75
E+G +++V ++D D G Y +N N A + + + E+
Sbjct: 2930 EIGSFVIRVTSSDLDLGPNANASYSFTENPGGKFSIDAQSGNITVAGHLDREQQEEYILK 2989
Query: 76 IQDEGGLSSTAT-VNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD-EGQ 132
++ G AT + I + D ND PEF+ Y FS PE Q G VG++ ATD D +G
Sbjct: 2990 VEVSDGAWRAATPITITIQDQNDNAPEFEHSFYSFSFPELQHSGALVGQIIATDRDKQGP 3049
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYL--ERVFLISKFAT 181
N+V+ YS+ + + F +D TG+I + K + + Q E ++ ++ AT
Sbjct: 3050 NSVISYSLQQSSLMFSIDPATGEIFSKKMVHFRHSQYVRSPENMYALTVLAT 3101
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 77/171 (45%), Gaps = 24/171 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
++G +A +K +G + Q ATDKDS + ++ Y L TD +F+++ +T
Sbjct: 3343 YHGYLAENK-PIGTFVFQAVATDKDSPRNAIIHYSFLPTGTDR-HFFSVNSSTGSIFSAV 3400
Query: 71 ------EHQGPIQDEGG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
+Q + + S AT+ I + +N+ P F + F V E G
Sbjct: 3401 SFDYEERRTYTLQLKAKNPDTIMESYATLFIHILGVNEFYPHFVQPVFHFDVSETSAMGT 3460
Query: 119 AVGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQ 166
VG V ATD D G++ VYY D F ++ NTG I + LD E Q
Sbjct: 3461 HVGAVQATDKDSGEDGRVYYLLVGASNDKGFGINTNTGVIHVARHLDRETQ 3511
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 73 QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ + D G LS V + +TD+ND P F PY ++ EG +G + V DAD
Sbjct: 1252 EATVSDNGSPRLSDKVKVKVIITDVNDNAPVFLRAPYHVTISEGASEGTHITHVFTQDAD 1311
Query: 130 EGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
EG N VYYS+ E F +D TG + + LD E Q+ +
Sbjct: 1312 EGLNGDVYYSLAGGNEAGQFSLDGATGQLTLARRLDRESQEAH 1354
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 20/157 (12%)
Query: 36 VKATDKDSGKFGLVEYRLLDN----------NTDAASYFNLDP------ATEHQGPIQDE 79
VKATD+DSG G V YRL D+ + + LD A + Q
Sbjct: 2835 VKATDRDSGDNGKVSYRLKDDYRGTFEIASDTGEIHTTMRLDREELGEYALVVEAVDQGR 2894
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY 138
L+ T++V + + D ND P+F L + +V E + G V RV ++D D G NA Y
Sbjct: 2895 PQLTGTSSVLLHLLDKNDNPPKFTRL-FSLNVTENAEIGSFVIRVTSSDLDLGPNANASY 2953
Query: 139 SVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERV 173
S E+ F +DA +G+I LD E+Q+ Y+ +V
Sbjct: 2954 SFTENPGGKFSIDAQSGNITVAGHLDREQQEEYILKV 2990
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 82/173 (47%), Gaps = 22/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAASY---FN 65
Y + + +G T++ V ATD D G G++ Y + +D T +
Sbjct: 3238 YQVIVPENEPVGSTILTVGATDADVGPNGMLRYAISGGNELRKFSVDERTGGIVIRQPLD 3297
Query: 66 LDPATEHQGPI--QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAV 120
D E+ I QD G LS+ A + I +TD+ND P F Y + E + G V
Sbjct: 3298 FDTTQEYHLNITVQDLGFQPLSAVAMLTIILTDVNDNPPVFAQKEYHGYLAENKPIGTFV 3357
Query: 121 GRVHATDADEGQNAVVYYS-VPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ ATD D +NA+++YS +P F V+++TG I + + DYE+++ Y
Sbjct: 3358 FQAVATDKDSPRNAIIHYSFLPTGTDRHFFSVNSSTGSIFSAVSFDYEERRTY 3410
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 69/161 (42%), Gaps = 30/161 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQ----- 73
G + V D D G G V Y L N A F+LD AT E Q
Sbjct: 1299 GTHITHVFTQDADEGLNGDVYYSLAGGN--EAGQFSLDGATGQLTLARRLDRESQEAHHL 1356
Query: 74 ------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHAT 126
++D LS+ T+ I V D ND PEF E SV E G + R A+
Sbjct: 1357 VVVARDAALKDS--LSANTTITIVVLDENDNAPEFTQSSSEVSVLETSPTGTELMRFRAS 1414
Query: 127 DADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYE 164
DAD+G N+ V +S+ F +D NTG + +K LDYE
Sbjct: 1415 DADQGVNSQVVFSISAGNRRDTFHIDTNTGSLYLHKMLDYE 1455
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 26/177 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL--DNNTD-----------AASYFN 65
Y A + +G ++QV ATD D G G + + ++ D N D A N
Sbjct: 2288 YSASVAENASIGAMVLQVSATDIDEGANGRIRFSIVMGDLNHDFTISEDTGVVRVAKNLN 2347
Query: 66 LDPATEHQGPIQDE-----GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ---DG 117
+ + + ++ E S TA + I + DIND P F PY V E +G
Sbjct: 2348 FERLSRYTLTVKAEDCDLENPASDTAELTIIILDINDNRPTFLDSPYLARVMENTVPPNG 2407
Query: 118 LAVGRVHATDADEGQ-NAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
V V A DAD N+ V Y + E D+ F ++A++GDI K LD E+Q Y+
Sbjct: 2408 GYVLTVKAYDADSPPLNSQVRYFLKEGDTDL-FRINASSGDISLLKPLDRERQSEYI 2463
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 71/182 (39%), Gaps = 42/182 (23%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRL------------------------------ 53
R+ + ++ +KA D D G+ G ++Y L
Sbjct: 2179 RENVAINTVVLAIKAVDNDEGRNGYIDYTLNGASIEDGSASQSEPLPFSLNPTDGLLRVT 2238
Query: 54 --LDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
LD A+ N+ + P + E L +R+ D ND +P F Y SV
Sbjct: 2239 DALDRELRASYLLNITARDRGEPPQEAETQLL------VRILDENDNSPIFDPKQYSASV 2292
Query: 112 PEGQD-GLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQ 167
E G V +V ATD DEG N + +S+ + F + +TG +R K L++E+
Sbjct: 2293 AENASIGAMVLQVSATDIDEGANGRIRFSIVMGDLNHDFTISEDTGVVRVAKNLNFERLS 2352
Query: 168 LY 169
Y
Sbjct: 2353 RY 2354
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 72/177 (40%), Gaps = 28/177 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE---HQGP 75
Y A+ + G + + ATD D+G V Y +L N +F++DP T GP
Sbjct: 507 YSAVLSELASKGSYVTSITATDGDTGVNAEVHYEILSGN--ELKWFSMDPLTGLIVTAGP 564
Query: 76 IQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGLA 119
+ E S +++ R V D ND+ P+F ++ E
Sbjct: 565 LDREVSDSVELSISARDGGPNPKFAYTQLKVTVLDENDEAPQFAQSHLNVTLTENAPAQT 624
Query: 120 -VGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
V + ATD D+G N V +++ + F +DA TG + T + LD E Y
Sbjct: 625 LVAVLTATDHDQGTNGSVTFALAPSVERLYPQQFAIDAITGQLTTRRFLDRESTARY 681
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV 140
L+ T V + V D+ND P F+ Y V E G V ATD DEG NA + +++
Sbjct: 2476 LTGTGVVRVEVQDMNDNGPVFELQSYHAVVEENLPAGTLVLHPTATDKDEGLNARLRFNL 2535
Query: 141 PED--IPFVVDANTGDIRTNKALDYEKQQLY 169
D + F +D+ TG I T+ LD E+ +Y
Sbjct: 2536 LGDHIMRFHIDSQTGIITTSMPLDREETAVY 2566
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 73/177 (41%), Gaps = 31/177 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA----------------- 61
Y A +K G +++V ATD +EY L+ N +
Sbjct: 3133 YLAPVPEKAGRGQKIVRVHATDGQLFGSNEIEYSLVSANLSSMFTIGTHDGWISLAKSLS 3192
Query: 62 ----SYFNLD-PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
S F LD AT+ P Q + V + VT N P+F + Y+ VPE +
Sbjct: 3193 SPPQSRFELDVRATDRGAPPQFD-----QTRVTVEVTGENLHTPKFSANTYQVIVPENEP 3247
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + V ATDAD G N ++ Y++ E F VD TG I + LD++ Q Y
Sbjct: 3248 VGSTILTVGATDADVGPNGMLRYAISGGNELRKFSVDERTGGIVIRQPLDFDTTQEY 3304
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 32/157 (20%)
Query: 32 TLMQV-KATDKDSGKFGLVEYRL----------------LDNNTDAASYFNLDPATEHQG 74
TL+ V ATD D G G V + L + + + + ++
Sbjct: 624 TLVAVLTATDHDQGTNGSVTFALAPSVERLYPQQFAIDAITGQLTTRRFLDRESTARYEI 683
Query: 75 PI--QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSV--------PEGQDGLAVG 121
P+ +D+G SSTATV + V D+ND +PEF Y +++ E +G +
Sbjct: 684 PVIARDQGAPTPQSSTATVWLNVADVNDNDPEFYPQHYIYTLGDDSRNDGHENGEGKILL 743
Query: 122 RVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIR 156
V A+D DEG NA++ YS+ + F +DA +G +R
Sbjct: 744 HVTASDRDEGDNALIEYSLVSGGEGLFQLDARSGALR 780
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 26/149 (17%)
Query: 38 ATDKDSGKFGLVEYRLLDNN--------------------TDAASYFNLDPATEHQGPIQ 77
ATD D+ + G + Y +++ N + Y+ L + G
Sbjct: 1074 ATDMDTAENGRISYEIIEGNGERIFGIFPDGYLFVKALLDREVRDYYALTVSCRDAG--- 1130
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG-LAVGRVHATDADEGQNAVV 136
E SS V I V D ND P+F + + FS+PE VG++ A D D G+NA +
Sbjct: 1131 -EPSRSSEVPVVIHVIDENDNAPQFTNSTFTFSIPENAPADTFVGKLTALDRDIGRNAEL 1189
Query: 137 YYSVPEDIP-FVVDANTGDIRTNKALDYE 164
+ + F +D G I+T + D E
Sbjct: 1190 SFVLTSHTQDFTIDIRNGFIKTLRPFDRE 1218
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 51/107 (47%), Gaps = 14/107 (13%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAV 135
Q + LSSTA V I + DIND+ P F S E +V E V + A D DEG+N
Sbjct: 2145 QKQQRLSSTAKVTILIKDINDEVPVFVS-ANETAVRENVAINTVVLAIKAVDNDEGRNGY 2203
Query: 136 VYYSV------------PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ Y++ E +PF ++ G +R ALD E + YL
Sbjct: 2204 IDYTLNGASIEDGSASQSEPLPFSLNPTDGLLRVTDALDRELRASYL 2250
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 66/168 (39%), Gaps = 22/168 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG---- 74
Y +A D E G + QV AT G G V Y + N A + + G
Sbjct: 2713 YFTLAEDV-EPGKVITQVSATSPKKGLVGSVHYGIAGGNMGDAVRVDPNSGVISVGADGL 2771
Query: 75 -----PI---------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
P+ D L S + + VTD ND P + L Y V E +
Sbjct: 2772 DYELLPLYEIWVEAVDGDRPSLRSVTLLTLNVTDTNDNAPVMERLIYNSEVLEEESPPQL 2831
Query: 120 VGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEK 165
+ V ATD D G N V Y + +D F + ++TG+I T LD E+
Sbjct: 2832 IAVVKATDRDSGDNGKVSYRLKDDYRGTFEIASDTGEIHTTMRLDREE 2879
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 28/170 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------- 71
Y A+ + G ++ ATDKD G + + LL D F++D T
Sbjct: 2501 YHAVVEENLPAGTLVLHPTATDKDEGLNARLRFNLLG---DHIMRFHIDSQTGIITTSMP 2557
Query: 72 ---------HQGPIQDEGGLS----STATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDG 117
H + + ++ S+ + I+V D+ND P F + Y ++P+ G
Sbjct: 2558 LDREETAVYHLTLMAQDSSVTEPRASSVNLTIQVGDVNDNAPSFDASRYTVTLPDRTSTG 2617
Query: 118 LAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYE 164
V ATD DE +NA+V YS+ +D F ++A TG + T L E
Sbjct: 2618 DFVFGALATDLDEAENAMVRYSISGKDQDY-FEINARTGVVSTKVVLKNE 2666
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 70/163 (42%), Gaps = 29/163 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LDPATEHQ---- 73
+G + V+ATDKDSG+ G V Y L+ + D N LD T+++
Sbjct: 3458 MGTHVGAVQATDKDSGEDGRVYYLLVGASNDKGFGINTNTGVIHVARHLDRETQNRVALT 3517
Query: 74 ------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
G I+ G + A V I + D ND PEF Y +V E G V V A
Sbjct: 3518 VLAKNYGSIR--GNDTDEAQVIISIQDGNDP-PEFIKRQYSSAVSEAAAIGTKVITVKAV 3574
Query: 127 DAD-EGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEK 165
D D QN YS+ F +DA +G+I T LD E+
Sbjct: 3575 DKDIRPQNNQFSYSIINGNLKQSFRIDAQSGEITTAAHLDREE 3617
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 23/126 (18%)
Query: 37 KATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE---HQGPIQDEGG------------ 81
+ D+D+G + Y L N D F++ PAT Q P+ E G
Sbjct: 969 RVRDRDAGVNSRIRYNLTHNPNDQ---FHIGPATGVLYLQRPVAAEPGAVLLVELMATDS 1025
Query: 82 ----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVV 136
LSS ++++ + D+ND P F YE S+ EG + + ATD D +N +
Sbjct: 1026 GHPALSSRLSLSVNIADVNDHTPVFDHTSYETSLLEGTRVNTRFFALPATDMDTAENGRI 1085
Query: 137 YYSVPE 142
Y + E
Sbjct: 1086 SYEIIE 1091
Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV- 140
++TA + I V D+ND P F+ Y + E G V + ATD D G NA V+Y +
Sbjct: 483 TTTAHLIIDVNDVNDHEPVFEKSEYSAVLSELASKGSYVTSITATDGDTGVNAEVHYEIL 542
Query: 141 --PEDIPFVVDANTGDIRTNKALDYE 164
E F +D TG I T LD E
Sbjct: 543 SGNELKWFSMDPLTGLIVTAGPLDRE 568
Score = 39.7 bits (91), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 72/183 (39%), Gaps = 35/183 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDS-GKFGLVEYRLLDNNTDAASYFNLDPAT------ 70
FY + G + Q+ ATD+D G ++ Y L ++ F++DPAT
Sbjct: 3021 FYSFSFPELQHSGALVGQIIATDRDKQGPNSVISYSL----QQSSLMFSIDPATGEIFSK 3076
Query: 71 -----EHQGPIQ-------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFS 110
H ++ D G L S VNI + D + P+F+ Y
Sbjct: 3077 KMVHFRHSQYVRSPENMYALTVLATDNGKPPLYSECLVNINIVDAHKNPPKFERAKYLAP 3136
Query: 111 VPE-GQDGLAVGRVHATDADE-GQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQ 166
VPE G + RVHATD G N + Y V ++ F + + G I K+L Q
Sbjct: 3137 VPEKAGRGQKIVRVHATDGQLFGSNEIEYSLVSANLSSMFTIGTHDGWISLAKSLSSPPQ 3196
Query: 167 QLY 169
+
Sbjct: 3197 SRF 3199
Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 69/165 (41%), Gaps = 28/165 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLV-EYRLLDNNTDA-------------ASYFNLDPA----TE 71
G L+ ATD DSG+ G+ +Y ++ N D SY +L+ E
Sbjct: 181 GTRLLLDAATDADSGENGVTDQYEIVAGNVDNKFRLATTTNPSGDTSYLHLETKGNLDRE 240
Query: 72 HQGPIQ-----DEGGLSST---ATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGR 122
+G Q +GG VN+ + D+ND P F Y S+ E G V
Sbjct: 241 SRGSYQLNISARDGGSPPRFGFLQVNVTILDVNDNPPIFDHSDYNVSLNETALPGTPVVT 300
Query: 123 VHATDADEGQNA-VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQ 166
V A+D D G N+ + YY + F V+ TG I + ++ +Q
Sbjct: 301 VMASDNDLGDNSKITYYLAETEHQFAVNPETGVISNTERVNCPQQ 345
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 53/124 (42%), Gaps = 5/124 (4%)
Query: 49 VEYRLLDNNTDAASYFNLDP-ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPY 107
V Y L D + +A F L AT+ P + L + V + V DIND P F S+
Sbjct: 1554 VIYTLRDIDREAIDTFRLTVVATDRAQPSDLQ--LHAEKLVTVIVEDINDNAPVFVSMNA 1611
Query: 108 EFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEK 165
Q V RVHA DAD N +V Y + + F ++ NTG + Y+
Sbjct: 1612 AMLPMTDQGPQQVMRVHARDADSSSNGLVTYEIVSGQQELFRLNRNTGIVTFTPGPQYKS 1671
Query: 166 QQLY 169
+ Y
Sbjct: 1672 KVRY 1675
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 67/166 (40%), Gaps = 37/166 (22%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL----------LDNNT------------DAASYFNLD 67
G LM+ +A+D D G V + + +D NT D SY
Sbjct: 1405 GTELMRFRASDADQGVNSQVVFSISAGNRRDTFHIDTNTGSLYLHKMLDYEDITSYALNI 1464
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA--VGRVHA 125
A++ P+ LS+T N+ V D ND P F S + EG GL + V A
Sbjct: 1465 TASDCGTPL-----LSTTVLYNVVVVDANDNPPIFPSTAIVRQIKEGI-GLKTPIVTVLA 1518
Query: 126 TDADEGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYE 164
D D G N V Y++ + P F ++ TG I T + +D E
Sbjct: 1519 DDPDSGLNGKVSYAISKQEPELSGGRHFGINTETGVIYTLRDIDRE 1564
>gi|11142063|gb|AAD43762.2|AF152501_1 protocadherin beta 8 [Homo sapiens]
Length = 801
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY + + +++V ATD D+G G + Y L + + + F +D T
Sbjct: 247 FYRVQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKK 306
Query: 71 ----------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
E +D GG S TV I+V D+ND PE + +PE V
Sbjct: 307 QLDFEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVV 366
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
+D D G+N + S+ ED+PF++ ++ G+ + T LD E + Y
Sbjct: 367 ALFSVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEY 418
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
S TA V I V D+ND PEFQ Y + E V +V ATD D G N + YS+
Sbjct: 224 SGTAQVYIEVVDVNDNAPEFQQPFYRVQISEDSPISFLVVKVSATDVDTGVNGEISYSLF 283
Query: 141 --PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
++I F VD TG+IR K LD+EK Q Y
Sbjct: 284 QASDEISKTFKVDFLTGEIRLKKQLDFEKFQSY 316
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 83/197 (42%), Gaps = 39/197 (19%)
Query: 9 ALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL-------------D 55
A TS +LF R+ + + + V ATD+DSG V Y LL
Sbjct: 451 AFTQTSYTLF----VRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVS 506
Query: 56 NNTDAASYFNLDP-------ATEHQGPIQDEG--GLSSTATVNIRVTDINDKNP------ 100
NTD F L A E + D G LSS A V + V D ND +P
Sbjct: 507 INTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVRVLVLDANDNSPFVLYPL 566
Query: 101 EFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIR 156
+ S P VP + G V +V A D D GQNA + Y + E F V A+ G++R
Sbjct: 567 QNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVR 626
Query: 157 TNKAL---DYEKQQLYL 170
T + L D KQ+L +
Sbjct: 627 TARLLSERDAAKQRLVV 643
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L++ + + V+D+ND P F Y V E L +G V ATD D G NA V YS+
Sbjct: 432 LTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSL 491
Query: 141 --PED--IPFV----VDANTGDIRTNKALDYEKQQLYLERV 173
P+D +P ++ + G + ++LDYE Q + RV
Sbjct: 492 LPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRV 532
>gi|395504788|ref|XP_003756729.1| PREDICTED: protocadherin gamma-A11-like [Sarcophilus harrisii]
Length = 829
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 74/163 (45%), Gaps = 25/163 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------------- 70
G L+ V ATD D G G V Y + +A+ F+LD T
Sbjct: 259 GTLLLTVNATDPDEGVNGEVTYSVRYFKDEASEIFHLDSHTAQLFTRETLDFEEFAAYEM 318
Query: 71 EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDAD 129
E QG +D GGL + A V + V D+ND PE SVPE G + ++ D D
Sbjct: 319 EIQG--RDGGGLLNRAKVQVTVLDVNDNTPEIIVASLTSSVPEHSPPGTVIALLNVHDRD 376
Query: 130 EGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
G N V S+PE +PF ++ + G+ + T +ALD E+ Y
Sbjct: 377 SGDNGRVICSIPEHLPFKLEKSYGNYYRLMTVRALDREQVSEY 419
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 63/129 (48%), Gaps = 14/129 (10%)
Query: 48 LVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPY 107
LV R LD + YF L A + P++ S TA + + V DIND P F Y
Sbjct: 195 LVLERALDREEEPVHYFTLT-AMDGGNPVR-----SGTARIRVAVLDINDNPPVFPQSEY 248
Query: 108 EFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV------PEDIPFVVDANTGDIRTNKA 160
SVPE G + V+ATD DEG N V YSV +I F +D++T + T +
Sbjct: 249 SVSVPENVPKGTLLLTVNATDPDEGVNGEVTYSVRYFKDEASEI-FHLDSHTAQLFTRET 307
Query: 161 LDYEKQQLY 169
LD+E+ Y
Sbjct: 308 LDFEEFAAY 316
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 37/188 (19%)
Query: 7 PSALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN---TDAASY 63
P + TS Y A R+ + ++ V A+D DSG+ + Y + ++ T +SY
Sbjct: 450 PPSFRQTS----YSAYIRENNPRSASIYSVTASDPDSGENAHITYSIEEDTIYGTPLSSY 505
Query: 64 FNLDPAT-----------------EHQGPIQDEGG--LSSTATVNIRVTDINDKNPEF-- 102
+++ T + QD G LSS T+ + ++D+ND P
Sbjct: 506 ISINSETGVLYALRSFDYEQFRDLQLTVTAQDSGKPPLSSNVTLQVFISDLNDNAPNILY 565
Query: 103 ------QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTG 153
+S ++ + G V +V A DAD G NA + Y V + F + TG
Sbjct: 566 PALGPDRSALFDMVPRSSEPGYLVTKVVAVDADSGHNAWLAYRVLQATDPGLFSLGLRTG 625
Query: 154 DIRTNKAL 161
+IRT +AL
Sbjct: 626 EIRTARAL 633
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNA 134
D+G LS++A +++ V D ND P F+ Y + E ++ V A+D D G+NA
Sbjct: 427 DQGIPSLSTSAHISLHVADNNDNPPSFRQTSYSAYIRENNPRSASIYSVTASDPDSGENA 486
Query: 135 VVYYSVPEDIPF--------VVDANTGDIRTNKALDYEK 165
+ YS+ ED + +++ TG + ++ DYE+
Sbjct: 487 HITYSIEEDTIYGTPLSSYISINSETGVLYALRSFDYEQ 525
>gi|291408000|ref|XP_002720205.1| PREDICTED: protocadherin 11 X-linked isoform 6 [Oryctolagus
cuniculus]
Length = 1301
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 80/174 (45%), Gaps = 26/174 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
F + + G L ++ ATD DSG+ + Y L TDA FNLD T
Sbjct: 470 FISISVPENNSPGTQLTKISATDADSGRNAEINYLL---GTDAPPEFNLDHRTGILTAVK 526
Query: 71 ----EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--QD 116
E Q +D G L + ATV + V D ND +P F Y F VPE +
Sbjct: 527 KLDREKQEKYYFTVLAKDNGIPPLITNATVLVTVLDQNDNSPIFTHNEYNFYVPENLPRH 586
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLY 169
G VG + TD D G+N+ V S+ + + F +D TG IR N + D EKQ+ Y
Sbjct: 587 G-TVGLITVTDPDYGENSAVTLSIVDVNDEFTIDPQTGVIRPNISFDREKQESY 639
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+ ++ + ++V D ND P F SVPE G + ++ ATDAD G+NA + Y +
Sbjct: 446 LNQSSMLLVKVKDENDNAPVFTQPFISISVPENNSPGTQLTKISATDADSGRNAEINYLL 505
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
D P F +D TG + K LD EKQ+ Y
Sbjct: 506 GTDAPPEFNLDHRTGILTAVKKLDREKQEKY 536
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 10/98 (10%)
Query: 78 DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
++GG SSTA + + V D ND P F+ E S+PE G +V ++HATDAD G+N
Sbjct: 222 EDGGFPQRSSTAILQVSVADTNDNRPVFKENEIEVSIPENAPVGTSVTQLHATDADIGEN 281
Query: 134 AVVYYSVPEDIP------FVVDANTGDIRTNKALDYEK 165
A +++ + F ++ TG I + LD E+
Sbjct: 282 AKIHFYFSNLVSNIAKRLFHLNTTTGLITVKEPLDREE 319
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 64/150 (42%), Gaps = 30/150 (20%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP---------------I 76
T+ + TD D G+ V ++D N + F +DP T P +
Sbjct: 588 TVGLITVTDPDYGENSAVTLSIVDVNDE----FTIDPQTGVIRPNISFDREKQESYTFYV 643
Query: 77 QDEGG----LSSTATVNIRVTDINDKNPEFQSLP----YEFSVPEGQDGLAVGRVHATDA 128
+ E G SSTA V I V D+ND P F P YE +P G V +V A D
Sbjct: 644 KAEDGGRVSRSSTAKVTINVVDVNDNKPVFVIPPSNYSYELVLPSTNPGAVVFQVVAVDN 703
Query: 129 DEGQNAVVYYSVPEDIP---FVVDANTGDI 155
D G NA + YS+ F++D +G+I
Sbjct: 704 DTGMNAEIRYSIAGGNAKGLFIIDQTSGNI 733
Score = 35.8 bits (81), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 30/175 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEY-----------RLLDNNTDAASYFNLDPATEHQGPIQ 77
+G ++ Q+ ATD D G+ + + RL NT +P + P
Sbjct: 264 VGTSVTQLHATDADIGENAKIHFYFSNLVSNIAKRLFHLNTTTGLITVKEPLDREEAPSH 323
Query: 78 -------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA--------VGR 122
D G + + A V + VTDIND P + Y + G L+ V
Sbjct: 324 KLLVLATDGGSMPARAMVLVNVTDINDNVPSID-IRYIINPTNGTVVLSENAPLNTKVAL 382
Query: 123 VHATDADEGQNAVVYYSVPEDIPFV---VDANTGDIRTNKALDYEKQQLYLERVF 174
+ TD D N V ++PF V +N + T LDYE + Y ++
Sbjct: 383 ITVTDKDADHNGRVTCFTDHEVPFRLRPVFSNQFLLETAAYLDYESTREYAIKLL 437
>gi|291407992|ref|XP_002720201.1| PREDICTED: protocadherin 11 X-linked isoform 2 [Oryctolagus
cuniculus]
Length = 1342
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 80/174 (45%), Gaps = 26/174 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
F + + G L ++ ATD DSG+ + Y L TDA FNLD T
Sbjct: 470 FISISVPENNSPGTQLTKISATDADSGRNAEINYLL---GTDAPPEFNLDHRTGILTAVK 526
Query: 71 ----EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--QD 116
E Q +D G L + ATV + V D ND +P F Y F VPE +
Sbjct: 527 KLDREKQEKYYFTVLAKDNGIPPLITNATVLVTVLDQNDNSPIFTHNEYNFYVPENLPRH 586
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLY 169
G VG + TD D G+N+ V S+ + + F +D TG IR N + D EKQ+ Y
Sbjct: 587 G-TVGLITVTDPDYGENSAVTLSIVDVNDEFTIDPQTGVIRPNISFDREKQESY 639
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+ ++ + ++V D ND P F SVPE G + ++ ATDAD G+NA + Y +
Sbjct: 446 LNQSSMLLVKVKDENDNAPVFTQPFISISVPENNSPGTQLTKISATDADSGRNAEINYLL 505
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
D P F +D TG + K LD EKQ+ Y
Sbjct: 506 GTDAPPEFNLDHRTGILTAVKKLDREKQEKY 536
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 10/98 (10%)
Query: 78 DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
++GG SSTA + + V D ND P F+ E S+PE G +V ++HATDAD G+N
Sbjct: 222 EDGGFPQRSSTAILQVSVADTNDNRPVFKENEIEVSIPENAPVGTSVTQLHATDADIGEN 281
Query: 134 AVVYYSVPEDIP------FVVDANTGDIRTNKALDYEK 165
A +++ + F ++ TG I + LD E+
Sbjct: 282 AKIHFYFSNLVSNIAKRLFHLNTTTGLITVKEPLDREE 319
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 64/150 (42%), Gaps = 30/150 (20%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP---------------I 76
T+ + TD D G+ V ++D N + F +DP T P +
Sbjct: 588 TVGLITVTDPDYGENSAVTLSIVDVNDE----FTIDPQTGVIRPNISFDREKQESYTFYV 643
Query: 77 QDEGG----LSSTATVNIRVTDINDKNPEFQSLP----YEFSVPEGQDGLAVGRVHATDA 128
+ E G SSTA V I V D+ND P F P YE +P G V +V A D
Sbjct: 644 KAEDGGRVSRSSTAKVTINVVDVNDNKPVFVIPPSNYSYELVLPSTNPGAVVFQVVAVDN 703
Query: 129 DEGQNAVVYYSVPEDIP---FVVDANTGDI 155
D G NA + YS+ F++D +G+I
Sbjct: 704 DTGMNAEIRYSIAGGNAKGLFIIDQTSGNI 733
Score = 35.8 bits (81), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 30/175 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEY-----------RLLDNNTDAASYFNLDPATEHQGPIQ 77
+G ++ Q+ ATD D G+ + + RL NT +P + P
Sbjct: 264 VGTSVTQLHATDADIGENAKIHFYFSNLVSNIAKRLFHLNTTTGLITVKEPLDREEAPSH 323
Query: 78 -------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA--------VGR 122
D G + + A V + VTDIND P + Y + G L+ V
Sbjct: 324 KLLVLATDGGSMPARAMVLVNVTDINDNVPSI-DIRYIINPTNGTVVLSENAPLNTKVAL 382
Query: 123 VHATDADEGQNAVVYYSVPEDIPFV---VDANTGDIRTNKALDYEKQQLYLERVF 174
+ TD D N V ++PF V +N + T LDYE + Y ++
Sbjct: 383 ITVTDKDADHNGRVTCFTDHEVPFRLRPVFSNQFLLETAAYLDYESTREYAIKLL 437
>gi|223460164|gb|AAI36802.1| Protocadherin beta 8 [Homo sapiens]
Length = 801
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY + + +++V ATD D+G G + Y L + + + F +D T
Sbjct: 247 FYRVQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKK 306
Query: 71 ----------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
E +D GG S TV I+V D+ND PE + +PE V
Sbjct: 307 QLDFEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVV 366
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
+D D G+N + S+ ED+PF++ ++ G+ + T LD E + Y
Sbjct: 367 ALFSVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEY 418
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
S TA V I V D+ND PEF+ Y + E V +V ATD D G N + YS+
Sbjct: 224 SGTAQVYIEVVDVNDNAPEFEQPFYRVQISEDSPISFLVVKVSATDVDTGVNGEISYSLF 283
Query: 141 --PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
++I F VD TG+IR K LD+EK Q Y
Sbjct: 284 QASDEISKTFKVDFLTGEIRLKKQLDFEKFQSY 316
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 83/197 (42%), Gaps = 39/197 (19%)
Query: 9 ALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL-------------D 55
A TS +LF R+ + + + V ATD+DSG V Y LL
Sbjct: 451 AFTQTSYTLF----VRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVS 506
Query: 56 NNTDAASYFNLDP-------ATEHQGPIQDEG--GLSSTATVNIRVTDINDKNP------ 100
NTD F L A E + D G LSS A V + V D ND +P
Sbjct: 507 INTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVRVLVLDANDNSPFVLYPL 566
Query: 101 EFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIR 156
+ S P VP + G V +V A D D GQNA + Y + E F V A+ G++R
Sbjct: 567 QNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVR 626
Query: 157 TNKAL---DYEKQQLYL 170
T + L D KQ+L +
Sbjct: 627 TARLLSERDAAKQRLVV 643
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L++ + + V+D+ND P F Y V E L +G V ATD D G NA V YS+
Sbjct: 432 LTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSL 491
Query: 141 --PED--IPFV----VDANTGDIRTNKALDYEKQQLYLERV 173
P+D +P ++ + G + ++LDYE Q + RV
Sbjct: 492 LPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRV 532
>gi|441614468|ref|XP_003257449.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin-17 [Nomascus
leucogenys]
Length = 1213
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 67/146 (45%), Gaps = 13/146 (8%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVN 89
G A D D+G+ GL Y L D F LD G E S+T +N
Sbjct: 148 GTRFPLTSAHDPDAGENGLRTYLL---TRDDHGLFGLDXXXXXXG---GEHPRSATVQIN 201
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP--- 145
++V D ND +P F++ Y +PE G V ++ATDADEG N V YS +P
Sbjct: 202 VKVIDSNDNSPVFEAPSYLVELPENAPLGTVVIDLNATDADEGPNGEVLYSFSSYVPDRV 261
Query: 146 ---FVVDANTGDIRTNKALDYEKQQL 168
F +D TG IR LDYE+ +
Sbjct: 262 RELFSIDPKTGLIRVKGNLDYEENGM 287
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 69/160 (43%), Gaps = 32/160 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLD--------------NNTDAASY----FNLD--PA 69
G L V A D D G+ G V Y +L N T+ A Y FN + A
Sbjct: 459 GEYLGSVLAQDPDLGQNGTVSYSILPSHIGDVSIYTYVSVNPTNGAIYALRSFNFEQTKA 518
Query: 70 TEHQGPIQDEGG---LSSTATVNIRVTDINDKN-----PEFQSLPYEFSVPEGQD-GLAV 120
E + +D G L S ATV + V D+ND P Q+ E VP G V
Sbjct: 519 FEFKVLAKDSGAPAHLESNATVRVTVLDVNDNAPVIVLPTLQNDTAELQVPRNAGLGYLV 578
Query: 121 GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRT 157
V A D+D G++ + Y + +D F +D ++G+IRT
Sbjct: 579 STVRALDSDFGESGRLTYEIVDGNDDHLFEIDPSSGEIRT 618
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 81/196 (41%), Gaps = 41/196 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL----------------------LDNNTD----AASY 63
G + V+ TD+DSGK G ++ R+ L+ N D +
Sbjct: 339 GTVIALVRVTDRDSGKNGQLQCRVLGGGGTGGGGGLGGTGGSVPFKLEENYDNFYTVVTD 398
Query: 64 FNLDPATEHQ---GPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-D 116
LD T+ + + +GG L+ST + +++ D ND P F Y V E
Sbjct: 399 RPLDRETQDEYNVTIVARDGGSPPLNSTKSFAVKILDENDNPPRFTKGLYVLQVHENNIP 458
Query: 117 GLAVGRVHATDADEGQNAVVYYSV-PEDIPFV-------VDANTGDIRTNKALDYEKQQL 168
G +G V A D D GQN V YS+ P I V V+ G I ++ ++E+ +
Sbjct: 459 GEYLGSVLAQDPDLGQNGTVSYSILPSHIGDVSIYTYVSVNPTNGAIYALRSFNFEQTKA 518
Query: 169 YLERVFLISKFATSYL 184
+ +V A ++L
Sbjct: 519 FEFKVLAKDSGAPAHL 534
>gi|301755822|ref|XP_002913760.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-23-like [Ailuropoda
melanoleuca]
Length = 3353
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 78/160 (48%), Gaps = 27/160 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD------------PATEHQG--- 74
G ++QV+ATD+D G ++ Y + + N D F +D P E QG
Sbjct: 1544 GTAVVQVRATDRDVGINSVLSYYITEGNEDMT--FRMDRISGEIATRPALPDRERQGFYH 1601
Query: 75 ---PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATD 127
++DEG LS+T V + + D ND P FQ YE + EG D + ++ + A D
Sbjct: 1602 LVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHYEILLDEGPDSINASLITIQALD 1661
Query: 128 ADEGQNAVVYYS-VPEDI--PFVVDANTGDIRTNKALDYE 164
DEG N V Y+ V +I F +D +TG I K LDYE
Sbjct: 1662 LDEGPNGTVNYAIVSGNIINTFRIDRHTGIISATKELDYE 1701
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 74/166 (44%), Gaps = 22/166 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G ++MQ+KATD D G+FG V YR+L N ++ +GP
Sbjct: 1118 GHSIMQLKATDADEGEFGRVWYRILHGNHGNNFRIHVSNGLLMRGPRPLDRERNSSHVLT 1177
Query: 77 -----QDEGGLSSTATVNIRVTDINDKNPEFQSLPY-EFSVPEGQD-GLAVGRVHATDAD 129
D G + S+ V + V D+ND+ P F Y + E G +V V ATD D
Sbjct: 1178 VEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYSRLGLRETAGVGTSVIVVRATDRD 1237
Query: 130 EGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
G +V Y + + F +D +TG I T LDYE + YL V
Sbjct: 1238 TGDGGLVNYHILSGAEGKFEIDESTGLIITVDYLDYETKTSYLMNV 1283
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
+S+ATV + + D+ND +P FQ+LP+ V EG G++V +V A D DEG N +V Y +
Sbjct: 871 TSSATVFVNLLDLNDNDPTFQNLPFVAEVLEGTPAGVSVYQVVAVDLDEGLNGLVSYRMQ 930
Query: 142 EDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
+P F++++++G + T+ LD E+ Y RV
Sbjct: 931 VGMPRMDFLINSSSGVVVTSAELDRERIAEYQLRV 965
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 22/164 (13%)
Query: 9 ALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD- 67
A +M +D L +G + A + D+G L + LD T S F ++
Sbjct: 57 ARDMDNDPLVFGVSGEEASRF-------FAVEPDTGVVWL--RQPLDRET--KSEFTVEF 105
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
++HQG I T VNI+V D+ND P F + PY +PE G + V+AT
Sbjct: 106 SVSDHQGVI--------TRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNAT 157
Query: 127 DADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
D D G V YS P F +D+ G + + LDYE Q Y
Sbjct: 158 DPDLGAGGSVLYSFQPPSPFFTIDSARGIVTVVRELDYETTQAY 201
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 31/155 (20%)
Query: 38 ATDKDSGKFGLVEYRLLDNN-----------------------TDAASYFNLDPATEHQG 74
A D+DSG G VEY ++D + + +++NL +G
Sbjct: 1768 AHDQDSGPNGQVEYSIVDGDPLGEFVISPVEGVLRVRKDVELDRETIAFYNLTICARDRG 1827
Query: 75 PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
LSST V IRV DIND +P +LP ++ E + + A+DAD G N
Sbjct: 1828 ----MPPLSSTMLVGIRVLDINDNDPVLLNLPANITISENSPVSSVIAHILASDADSGCN 1883
Query: 134 AVVYYSVP---EDIPFVVDANTGDIRTNKALDYEK 165
A++ +++ + F ++A TG I N+ LD E+
Sbjct: 1884 ALLTFNITAGNRERAFSINATTGVITVNRPLDREQ 1918
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 75/168 (44%), Gaps = 33/168 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------------ 70
+G ++ V ATD DSG F L+EY L D F ++P T
Sbjct: 2416 VGTVILTVTATDADSGNFALIEYSL----GDGEGKFAINPTTGDIYVLSSLDREKKNHYI 2471
Query: 71 ------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRV 123
++ G I +S V I+V D+ND P+F + SV E + G +V +
Sbjct: 2472 LTALAKDNPGDIASNRRENSVQVV-IQVLDVNDCRPQFSKPQFSTSVYENEPAGTSVITM 2530
Query: 124 HATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKAL-DYEKQQL 168
ATD DEG N + YS+ P F VD ++G + T + L YE+ L
Sbjct: 2531 LATDQDEGPNGELAYSLEGPGVEAFHVDTDSGLVTTKRLLQSYERFNL 2578
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 30/166 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLD-------------------NNT---DAASYFNLD 67
G TL+ V A D D G GL+ Y +LD N T + + N
Sbjct: 2311 GTTLIAVAAVDPDKGLNGLITYTVLDLMPPGYVQLEDPSAGKVIANQTVDYEEVHWLNFT 2370
Query: 68 -PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHA 125
A+++ P + ++ V + + DIND NP F Y+ +V E G + V A
Sbjct: 2371 VRASDNGSPPR-----AAEIPVYLEIVDINDNNPIFDQPSYQEAVFEDAPVGTVILTVTA 2425
Query: 126 TDADEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYL 170
TDAD G A++ YS+ + + F ++ TGDI +LD EK+ Y+
Sbjct: 2426 TDADSGNFALIEYSLGDGEGKFAINPTTGDIYVLSSLDREKKNHYI 2471
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 74/177 (41%), Gaps = 29/177 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNN----------------TDAASY------FNL 66
+ +L+ ++A D D G G V Y ++ N T Y + L
Sbjct: 1650 INASLITIQALDLDEGPNGTVNYAIVSGNIINTFRIDRHTGIISATKELDYEISHGRYTL 1709
Query: 67 DPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYE--FSVPEGQDGLAVGRVH 124
Q PI + L+ST V + V DIND P F YE F V EGQ G V
Sbjct: 1710 IVTATDQCPILSQR-LTSTTMVLVNVNDINDNVPTFPR-DYEGPFDVTEGQPGPRVWTFL 1767
Query: 125 ATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
A D D G N V YS+ + P FV+ G +R K ++ +++ + + + ++
Sbjct: 1768 AHDQDSGPNGQVEYSIVDGDPLGEFVISPVEGVLRVRKDVELDRETIAFYNLTICAR 1824
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV 140
+ TATV I V D+ND P F YE SVPE +G ++ ++ ATDADEG+ V+Y +
Sbjct: 1083 TGTATVFITVLDVNDNRPIFLQSSYEASVPEDIPEGHSIMQLKATDADEGEFGRVWYRI 1141
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 70/172 (40%), Gaps = 28/172 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI- 76
Y + +G +++ V ATD D G FG V Y +D F+LD T I
Sbjct: 464 LYNTSLYENATVGTSVLTVLATDNDVGTFGEVNYFF----SDDPDRFSLDKDTGLILLIA 519
Query: 77 ----------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA- 119
+D GG +T V I V D+ND P FQ Y ++ E + +
Sbjct: 520 RLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQ 579
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIPF------VVDANTGDIRTNKALDYEK 165
+ R+ ATD D N + YS+ F V G I ++ LDYE+
Sbjct: 580 LVRLRATDEDAPPNNQITYSIVSASVFGSYFDVSVYEGYGVISVSRPLDYEQ 631
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 73/161 (45%), Gaps = 21/161 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDA----ASYFNLDPATEHQGPI 76
GV++ QV A D D G GLV YR+ L N++ ++ + + E+Q +
Sbjct: 906 GVSVYQVVAVDLDEGLNGLVSYRMQVGMPRMDFLINSSSGVVVTSAELDRERIAEYQLRV 965
Query: 77 --QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEG 131
D G S+T+T+ IRV D+ND+ P F Y SV E V ++ TD D G
Sbjct: 966 VASDAGTPTKSATSTLTIRVLDVNDETPTFFPATYNVSVSEDVPREFRVVWLNCTDDDAG 1025
Query: 132 QNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
NA + Y + D F V +RT +LD E Y
Sbjct: 1026 LNAELSYFITGGNVDGKFSVGYRDAVVRTVVSLDRETTATY 1066
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------ 76
+G + VKA D D+G G V + L N A F++ + G +
Sbjct: 1434 VGQQVATVKARDPDAGSNGQVVFSLASGNIAGA--FDIVTTNDSIGEVFVARPLDREELD 1491
Query: 77 --------QDEGG--LSSTATVNIRVTDINDKNPEFQSLP-YEFSVPEG-QDGLAVGRVH 124
D G + + V D+ND P +S Y SV E G AV +V
Sbjct: 1492 HYILKVVASDRGSPPRKKDHILQVTVLDVNDNPPVIESPSGYNVSVNENVGGGTAVVQVR 1551
Query: 125 ATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKAL-DYEKQQLY 169
ATD D G N+V+ Y + ED+ F +D +G+I T AL D E+Q Y
Sbjct: 1552 ATDRDVGINSVLSYYITEGNEDMTFRMDRISGEIATRPALPDRERQGFY 1600
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 73/166 (43%), Gaps = 29/166 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYFNLDPATE--HQGPIQD 78
G +++ + ATD+D G G + Y L +D ++ + L + E + +
Sbjct: 2524 GTSVITMLATDQDEGPNGELAYSLEGPGVEAFHVDTDSGLVTTKRLLQSYERFNLTVVAT 2583
Query: 79 EGG---LSSTATVNIRVTDINDKNPEFQSLP------YEFSVPEGQDGLAVGRVHATDAD 129
+GG L T + + V D+ND P F P +P + V V+ATD D
Sbjct: 2584 DGGQPPLWGTTMLLVEVIDVNDNRPVFVRPPNGTVLHIREEIPLRSN---VYEVYATDKD 2640
Query: 130 EGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
EG N V YS + F +D +G I+T + LD EKQ LY
Sbjct: 2641 EGLNGAVRYSFLKTAGNRDWEYFTIDPISGLIQTAQRLDREKQALY 2686
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 11/90 (12%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPY-----EFSVPEGQDGLAVGRVHATDADEGQNAVVY 137
+ ATVNI + DIND +P ++ PY E + P+ V V A D D G+N +
Sbjct: 759 TGIATVNITLLDINDNHPTWKDAPYYINLVEMTPPDSD----VTTVVAVDPDLGENGTLV 814
Query: 138 YSV-PEDIPFVVDANTGDIRTNKA-LDYEK 165
YS+ P + + ++++TG IRT LD E
Sbjct: 815 YSIQPPNKFYSLNSSTGKIRTTHVTLDREN 844
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 73/173 (42%), Gaps = 36/173 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------EHQGPIQ 77
G +++QV ATD+DSG G + YR+ A F + P T E Q +
Sbjct: 2084 GFSVLQVTATDRDSGLNGELIYRI---EAGAQDRFLIHPVTGVIRVANATIDREEQDSYR 2140
Query: 78 ------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDA 128
D G LS TAT+ I + DIND PEF + SV E + G + + A D
Sbjct: 2141 LTVVATDRGTVPLSGTATITILINDINDCRPEFLNPIQTVSVLESAEPGTVIANITAIDR 2200
Query: 129 D---EGQNAVVYYSVPED----IP-----FVVDANTGDIRTNKALDYEKQQLY 169
D + + ++ +D +P F V+ NTG + L+ E Y
Sbjct: 2201 DLNPKLEYHIIGIVAKDDTDRLVPDQEDAFAVNINTGSVMVKSPLNRELVATY 2253
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 31/181 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD---------- 67
+ GA+ R+ L++++ATD+D+ + Y ++ + SYF++
Sbjct: 566 YVGAL-RENEPSVTQLVRLRATDEDAPPNNQITYSIVSASV-FGSYFDVSVYEGYGVISV 623
Query: 68 --PATEHQGP---------IQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
P Q P +D G L+ST V I V D ND P F Y SV E
Sbjct: 624 SRPLDYEQIPNGLIYLTVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVEN 683
Query: 115 -QDGLAVGRVHATDADE----GQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G V ++ATD D GQ +++ YS+ F ++A +G+I T LD E + Y
Sbjct: 684 IMAGATVLFLNATDLDRSREYGQESII-YSLEGSSQFRINARSGEITTTSLLDRETKSEY 742
Query: 170 L 170
+
Sbjct: 743 I 743
Score = 42.7 bits (99), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 63/150 (42%), Gaps = 37/150 (24%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN--NTDAASYFNLDPATEHQGPIQDEGG 81
R++ L + +V ATDKD G G V Y L N D YF +DP + G IQ
Sbjct: 2622 REEIPLRSNVYEVYATDKDEGLNGAVRYSFLKTAGNRDW-EYFTIDPIS---GLIQTAQR 2677
Query: 82 L-----------------------SSTATVNIRVTDINDKNPEFQSLP-----YEF-SVP 112
L + + + + DI+D P F P Y+ +VP
Sbjct: 2678 LDREKQALYSLILVASDLGQPVPYETMQPLQVALEDIDDNEPVFVRPPKGSPQYQLLTVP 2737
Query: 113 E-GQDGLAVGRVH-ATDADEGQNAVVYYSV 140
E G VG V A DADEG NA+VYY +
Sbjct: 2738 EHSPPGTLVGNVTGAVDADEGPNAIVYYFI 2767
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 72/176 (40%), Gaps = 36/176 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------ASYFNLDPATEHQGPIQDEGGL 82
G T+ + A D+D G+ + Y ++ NT++ + L+ + + P+ G +
Sbjct: 252 GTTVRVITAIDQDKGRPRGIGYTIVSGNTNSIFALDYISGALTLNGLLDRENPLYSHGFI 311
Query: 83 -----------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGR-V 123
+ T T NI V DIND PEF S Y ++ E Q G A+ +
Sbjct: 312 LTVKGTELNDDRTPSDATVTTTFNILVIDINDNAPEFNSSEYSVAITELAQVGFALPLFI 371
Query: 124 HATDADE--GQNAV--VYYSVPEDIPFVVDANT----GDIRTNKA--LDYEKQQLY 169
D DE G N++ VY F++ + DIR A LDYE Y
Sbjct: 372 QVVDKDENLGLNSMFEVYLVGNNSQHFIISPTSVQGKADIRIRVAVPLDYETVDRY 427
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 86 ATVNIRVTDINDKNPEFQSLP---YEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
A + + + D+ND P+F+ Y + EG G + V A D D+G N ++ Y+V
Sbjct: 2276 AKLTVNILDVNDNTPQFKPFGITYYTERILEGATPGTTLIAVAAVDPDKGLNGLITYTVL 2335
Query: 142 EDIP----FVVDANTGDIRTNKALDYEK 165
+ +P + D + G + N+ +DYE+
Sbjct: 2336 DLMPPGYVQLEDPSAGKVIANQTVDYEE 2363
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 32/173 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEY---------------------RLLDNN 57
Y + +G + V ATD D G G V Y R LD
Sbjct: 137 YSVRIPENTPVGTPIFIVNATDPDLGAGGSVLYSFQPPSPFFTIDSARGIVTVVRELDYE 196
Query: 58 TDAASYFNLDPATEHQGPIQDEGG-LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
T A ++ AT+ QD+ LS+ A + I +TD+ D +P F +LPY ++ E
Sbjct: 197 TTQAYQLTVN-ATD-----QDKTRPLSTLANLAIIITDVQDMDPIFINLPYSTNIYEHSP 250
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEK 165
G V + A D D+G+ + Y++ + F +D +G + N LD E
Sbjct: 251 PGTTVRVITAIDQDKGRPRGIGYTIVSGNTNSIFALDYISGALTLNGLLDREN 303
Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 70/176 (39%), Gaps = 39/176 (22%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------- 70
R+ +G +++ V+ATD+D+G GLV Y +L + A F +D +T
Sbjct: 1219 RETAGVGTSVIVVRATDRDTGDGGLVNYHIL---SGAEGKFEIDESTGLIITVDYLDYET 1275
Query: 71 ----------EHQGPIQDEGGLSSTATVNIRVTDIN--DKNPEFQSLPYEFSVPEGQD-G 117
Q P ++G S + VT +N D+ +F + YE ++ E G
Sbjct: 1276 KTSYLMNVSATDQAPPFNQGFCS------VYVTLLNELDEAVQFSNASYEAAILENLALG 1329
Query: 118 LAVGRVHATDADEGQNAV----VYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ RV A D Y S F +D+ TG I +D EK Y
Sbjct: 1330 TEIVRVQAYSIDNLNQITYRFDAYTSAQAKALFKIDSVTGVITVKGPVDREKGDFY 1385
Score = 36.2 bits (82), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNAVVYYSV 140
V + + DIND+ P F Y V + + G + RV A DAD G N++V+Y +
Sbjct: 2831 VRVVLEDINDQPPRFTKAEYTAGVATDAKVGSELIRVLALDADTGNNSLVFYGI 2884
Score = 35.8 bits (81), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAV 135
+D G L+ TA + + + D ND P F + E G +V +V ATD D G N
Sbjct: 2043 EDIGLLNGTADLLVTILDDNDNWPTFSPPTLTVHLLENCPPGFSVLQVTATDRDSGLNGE 2102
Query: 136 VYYSVPEDIP--FVVDANTGDIRT-NKALDYEKQQLY 169
+ Y + F++ TG IR N +D E+Q Y
Sbjct: 2103 LIYRIEAGAQDRFLIHPVTGVIRVANATIDREEQDSY 2139
Score = 35.8 bits (81), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 74/182 (40%), Gaps = 29/182 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLDPAT---EHQG 74
Y A + LG +++V+A D+ + YR + A + F +D T +G
Sbjct: 1318 YEAAILENLALGTEIVRVQAYSIDN--LNQITYRFDAYTSAQAKALFKIDSVTGVITVKG 1375
Query: 75 PIQDEGG---------------LSSTATVNIRVTDINDKNPEFQ-SLPYEFSVPEGQD-G 117
P+ E G + ST V I V D ND +P F + SVPE G
Sbjct: 1376 PVDREKGDFYTLTVVADDGGPKVDSTVKVYITVLDENDNSPRFDFTSDSAVSVPEDCPVG 1435
Query: 118 LAVGRVHATDADEGQNAVVYYSVPE-DIPFVVDANT-----GDIRTNKALDYEKQQLYLE 171
V V A D D G N V +S+ +I D T G++ + LD E+ Y+
Sbjct: 1436 QQVATVKARDPDAGSNGQVVFSLASGNIAGAFDIVTTNDSIGEVFVARPLDREELDHYIL 1495
Query: 172 RV 173
+V
Sbjct: 1496 KV 1497
>gi|432899681|ref|XP_004076615.1| PREDICTED: protocadherin-1-like [Oryzias latipes]
Length = 1259
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 86/170 (50%), Gaps = 22/170 (12%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQ 73
++++ G T++ V ATD DSG + Y ++ ++ F +DP T EH+
Sbjct: 550 EENQPGETILDVTATDADSGTNAELFYNIV-GDSYIKGLFEIDPNTGEVKARTPLDREHK 608
Query: 74 GPIQ------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVH 124
+ D+G TATV I+V D ND +P+F Y FSV E L+ VG V
Sbjct: 609 ERYEFRVTAADKGSPVHKGTATVVIKVLDCNDNDPKFMLSGYSFSVLENMPPLSPVGMVT 668
Query: 125 ATDADEGQNAVVYYSV-PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
D D+G+NA V+ SV P+ FVV TG I ++ + D EK+ Y R+
Sbjct: 669 VLDMDKGENAHVHLSVEPDGGKFVVQNGTGTILSSISFDREKESSYTFRL 718
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 5/97 (5%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFS-VPEGQDGLAVGRVHATDADEGQNAVVYYSV 140
LSST ++ ++VTD+ND +P F +E E Q G + V ATDAD G NA ++Y++
Sbjct: 519 LSSTNSLKVQVTDVNDNSPVFSPTIFEVDFAEENQPGETILDVTATDADSGTNAELFYNI 578
Query: 141 PEDI----PFVVDANTGDIRTNKALDYEKQQLYLERV 173
D F +D NTG+++ LD E ++ Y RV
Sbjct: 579 VGDSYIKGLFEIDPNTGEVKARTPLDREHKERYEFRV 615
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 41/197 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGP 75
Y A + +G +++QVKA D D G G +EY L +D T +GP
Sbjct: 318 YEAEVSENSPVGHSVLQVKADDSDMGPNGEIEYSLHQAVDPVPKLLRIDRTTGIIYVKGP 377
Query: 76 I--------------QDEGGL--SSTATVNIRVTDINDKNP--EFQSLPYEFSVPEG--- 114
+ +D+G SS V I VTD ND P E + + + EG
Sbjct: 378 LDREEINSLSFYVVARDKGPQPKSSKTFVTIEVTDQNDNAPAVEIRGIGL-VTHSEGIAN 436
Query: 115 --QD---GLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDA---NTGD------IRTNKA 160
+D G AV V +D DEG+NAVV V D+PF + +T D ++T
Sbjct: 437 ISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSTSDNKRKYFLQTTTP 496
Query: 161 LDYEKQQLYLERVFLIS 177
LDYE+ + Y RV +++
Sbjct: 497 LDYERVKEY--RVEIVA 511
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 70/159 (44%), Gaps = 32/159 (20%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD------------------- 78
ATD+DS + G+ +Y L DAA+ F L A + G +
Sbjct: 225 ATDRDSERNGVADYALT-AGPDAATLFGLQVADDRGGKLPQLIVLGNLDRELKDSYDLTI 283
Query: 79 ---EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+GG S A + + VTD ND +P+F+ YE V E G +V +V A D+D G
Sbjct: 284 KAVDGGNPQRYSQALLRVVVTDANDNSPKFEHPSYEAEVSENSPVGHSVLQVKADDSDMG 343
Query: 132 QNAVVYYSVPEDIPFV-----VDANTGDIRTNKALDYEK 165
N + YS+ + + V +D TG I LD E+
Sbjct: 344 PNGEIEYSLHQAVDPVPKLLRIDRTTGIIYVKGPLDREE 382
>gi|390460431|ref|XP_002745424.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23-like [Callithrix
jacchus]
Length = 2880
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 31/184 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA-------- 69
F A ++ +G + + A D D G+ G V Y +L N + A F LD +
Sbjct: 1132 FPIAHVKEDVTVGSLVHHITAHDPDEGRNGKVTYSILSGNENMA--FMLDESSGLLTTTC 1189
Query: 70 -------TEHQGPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
T+H + D+G LSS+ T+ I V D+ND+ P F+ YE SV E Q+ G
Sbjct: 1190 PLDYEMKTQHILTVLALDDGTPALSSSQTLTITVLDVNDEAPVFKQQLYEASVKENQNPG 1249
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLE 171
V RV A D D G N+ + + + +P F ++++TG++ T LD E Q+++
Sbjct: 1250 EFVVRVEALDRDSGVNSKLQFEI---MPGASFELFQINSDTGEVVTTTMLDREIQEVFTL 1306
Query: 172 RVFL 175
RV +
Sbjct: 1307 RVLV 1310
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 82/178 (46%), Gaps = 25/178 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
+L+Y + R+ E+G ++ + A DKD G G EY L D +A+ F +DP +
Sbjct: 1444 TLYYQSSVREDAEVGTVVLMLSAVDKDEGLNGQTEYLLTD---EASGAFTIDPTSGTLRT 1500
Query: 71 ----EHQGPIQD-----------EGGLSSTATVNIRVTDINDKNPEFQSLPYE-FSVPEG 114
+ + Q EG S+T + + +TD+ND +P + P++ F P+
Sbjct: 1501 SNTLDREARSQHTFSAVARDCSIEGSRSTTVIIKVYITDVNDNDPVLEQNPFDVFLSPQS 1560
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLE 171
+ A D D G N V +S E F +D +TG+I+ ++ E ++L+
Sbjct: 1561 PTNQTTVILKADDPDLGPNGTVVFSFVETQSMFSIDKHTGEIQLQQSPSSEYFPIWLQ 1618
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 61/124 (49%), Gaps = 18/124 (14%)
Query: 62 SYFNLDPATEHQGPIQ------DEGGLSSTAT--VNIRVTDINDKNPEF-QSLP---YEF 109
S+ LD EHQG Q D G AT V + VTDIND P F Q LP
Sbjct: 757 SWVALD--REHQGHHQMTVLVTDRGSPPRNATIAVYVSVTDINDNKPLFPQCLPGKELHV 814
Query: 110 SVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEK 165
V EGQ + V V A D DEG NA V YSV + F +DAN+G+IRT L Y+
Sbjct: 815 KVLEGQPVNMLVTTVFAKDPDEGNNAEVVYSVSSEDSSDHFKIDANSGEIRTTTILSYDY 874
Query: 166 QQLY 169
+ Y
Sbjct: 875 RPSY 878
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 21/172 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA---------------S 62
Y + + E G +++ VKA DS + + +Y + N D
Sbjct: 1652 LYKGLVTENCEAGTSIVTVKAFAPDSMQDSM-KYSIFSGNEDGVLSLCSKSGQLTVKEPK 1710
Query: 63 YFNLDPATEHQGPIQDEG-GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAV 120
+ + + E Q + E G + + V + + D+ND +P F+ Y+ SV EGQ ++
Sbjct: 1711 FLDFEVRNEVQLIVLAESSGHRAYSKVAVLIQDVNDNSPCFEQSIYQASVSEGQFYNASI 1770
Query: 121 GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ATD D G N ++ YS+ ++ F +DA +G I TN LDYE Y
Sbjct: 1771 IQVFATDLDSGLNGLIEYSILSGNQEAAFRIDALSGVITTNAILDYELTSSY 1822
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 70/156 (44%), Gaps = 30/156 (19%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------------- 82
V A+D D+G VEY ++D NTD YF ++ E G + L
Sbjct: 1359 VLASDMDAGNNRAVEYHIIDGNTD--EYFAIN---EMSGELSTTRALDREQVSNFTLAIL 1413
Query: 83 ---------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQ 132
SS + +RV D ND +P F +L Y+ SV E + G V + A D DEG
Sbjct: 1414 CSDLGDPPRSSVIHLQVRVLDANDHSPSFPTLYYQSSVREDAEVGTVVLMLSAVDKDEGL 1473
Query: 133 NAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQ 166
N Y + ++ F +D +G +RT+ LD E +
Sbjct: 1474 NGQTEYLLTDEASGAFTIDPTSGTLRTSNTLDREAR 1509
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 77/172 (44%), Gaps = 21/172 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA-------------SYF 64
Y A + +++QV ATD DSG GL+EY +L N +AA +
Sbjct: 1755 IYQASVSEGQFYNASIIQVFATDLDSGLNGLIEYSILSGNQEAAFRIDALSGVITTNAIL 1814
Query: 65 NLDPATEHQGPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
+ + + + +Q D+G LS+T + I+VTDIND P F + G+ V
Sbjct: 1815 DYELTSSYSLIVQATDKGMPRLSNTTVIKIQVTDINDNAPAFLHSEAVEIAEDSLPGVIV 1874
Query: 121 GRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
V D D +A ++ E P F +D NTG + K LD+E+ Y
Sbjct: 1875 THVSVHDVDL-NSAFIFSFAKESNPGTKFAIDQNTGVVVLVKTLDFEEVTEY 1925
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 20/168 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSG-----KFGLV---EYRLLDNNTDAASYFN---L 66
Y A ++ G +++V+A D+DSG +F ++ + L N+D L
Sbjct: 1237 LYEASVKENQNPGEFVVRVEALDRDSGVNSKLQFEIMPGASFELFQINSDTGEVVTTTML 1296
Query: 67 DPATEH----QGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
D + + ++D G LS T T+ V D ND PEF Y+ V E Q+ V
Sbjct: 1297 DREIQEVFTLRVLVRDGGVPSLSGTTTILCTVEDENDHAPEFIVFSYDIEVLENQEPEVV 1356
Query: 121 GRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEK 165
V A+D D G N V Y + + D F ++ +G++ T +ALD E+
Sbjct: 1357 YTVLASDMDAGNNRAVEYHIIDGNTDEYFAINEMSGELSTTRALDREQ 1404
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 71/159 (44%), Gaps = 42/159 (26%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDN--NTDAASYFNLDPATEHQGPI---QD--------- 78
L++V A+D DSG +G +EY L D + +A F +DP H G I QD
Sbjct: 43 LVRVTASDADSGLYGFIEYSLYDGFLSYEAPQAFQIDP---HDGRICVSQDIDRERDPAT 99
Query: 79 ---------------------EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQD 116
+GGLS+ A V + + D+ND +P F Y S+ + Q
Sbjct: 100 YDLLVKATDGDEQRVTHLALMKGGLSAQAFVRVDLEDVNDNHPVFNPSTYVTSISGQTQP 159
Query: 117 GLAVGRVHATDADEG-QNAVVYYSVPEDIP--FVVDANT 152
G + V ATD D G V Y +P D+ F++D+ T
Sbjct: 160 GSEIIHVLATDRDSGIYGTVAYELIPGDVSSLFIIDSTT 198
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 25/176 (14%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNN--TDAASY----FNLDPATE--HQGPI------- 76
T+ + A D D+G +G + Y ++ SY F +DP T H I
Sbjct: 2296 TICSINALDFDAGPYGELTYSIVSPCLLIHGMSYDHDLFLIDPLTGDIHAKQILDYENGN 2355
Query: 77 --------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
+D+G +++ V + + I++ P F Y F++PE +D +GRV A+D
Sbjct: 2356 KYCLTVQAKDKGDATASLVVWVDIEGIDEFEPIFTQDQYLFTLPEKNKDRQLIGRVEASD 2415
Query: 128 ADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEKQQLYLERVFLISKFATS 182
AD G + V+ YS+ PF V+ G+I +AL K Q+ E + + A S
Sbjct: 2416 ADAGIDGVILYSLGTSSPFFSVNKTNGNIYLIRALPLMKSQVNKEDIMEMKIIAHS 2471
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
LS+TA ++I+V D+ND P F SL Y V E G + V A D D G +A + Y +
Sbjct: 2154 LSATAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGSHITVVSANDRDTGSHAEIIYHI 2213
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEK 165
E F ++ NTG + K LDYE+
Sbjct: 2214 ISGNEKGHFYLEENTGVLYLIKTLDYEE 2241
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---PED 143
T I + D+ND P F S P + G V + A D DEG+N V YS+ E+
Sbjct: 1114 TAQIVILDVNDHKPTFMSFPIAHVKEDVTVGSLVHHITAHDPDEGRNGKVTYSILSGNEN 1173
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
+ F++D ++G + T LDYE + ++ V +
Sbjct: 1174 MAFMLDESSGLLTTTCPLDYEMKTQHILTVLAL 1206
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 70/183 (38%), Gaps = 30/183 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF----------- 64
SL Y ++ LG + V A D+D+G + Y ++ N Y
Sbjct: 2176 SLSYHTHVKESTPLGSHITVVSANDRDTGSHAEIIYHIISGNEKGHFYLEENTGVLYLIK 2235
Query: 65 --NLDPATEHQGPIQD---EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
+ + T+ +Q E S A V + V D ND P+F + VPE
Sbjct: 2236 TLDYEEMTKFTLTVQASDAEKKHFSFAVVFVNVLDDNDHAPQFMFSSFNCVVPENLPVSS 2295
Query: 119 AVGRVHATDADEGQNAVVYYSV------------PEDIPFVVDANTGDIRTNKALDYEKQ 166
+ ++A D D G + YS+ D+ F++D TGDI + LDYE
Sbjct: 2296 TICSINALDFDAGPYGELTYSIVSPCLLIHGMSYDHDL-FLIDPLTGDIHAKQILDYENG 2354
Query: 167 QLY 169
Y
Sbjct: 2355 NKY 2357
Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYY 138
G S+ VNI V D+ND +P F E + + G A+ A D D G+N ++ Y
Sbjct: 425 GPACSSTEVNITVLDVNDNHPTFLRTSDEIRLSQTTPPGTALYLARAEDRDSGRNGLIRY 484
Query: 139 SV--PEDIPFVVDANTGDIRTNKAL 161
++ P+ F +D G + N +L
Sbjct: 485 AIANPQPSVFAIDRALGVLFLNGSL 509
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 14/94 (14%)
Query: 79 EGGL---SSTATVNIRVTDINDKNPEFQS----LPYEFS-VPEGQDGLAVGRVHATDADE 130
EGGL STA + + V D ND +P F L E S VP+G +G++ A D D
Sbjct: 634 EGGLLQNVSTAVI-VHVRDENDNSPTFLHDVLFLKVEESPVPQG----VIGKITAIDMDS 688
Query: 131 GQNA-VVYYSVPEDIPFVVDANTGDIRTNKALDY 163
G+N ++Y+ + E F ++ NTG RT + +
Sbjct: 689 GKNGQLLYFLLSEGKFFKMNPNTGPGRTIDVITW 722
>gi|333440480|ref|NP_061993.2| protocadherin beta-8 precursor [Homo sapiens]
gi|145559514|sp|Q9UN66.3|PCDB8_HUMAN RecName: Full=Protocadherin beta-8; Short=PCDH-beta-8; AltName:
Full=Protocadherin-3I; Flags: Precursor
Length = 801
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY + + +++V ATD D+G G + Y L + + + F +D T
Sbjct: 247 FYRVQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKK 306
Query: 71 ----------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
E +D GG S TV I+V D+ND PE + +PE V
Sbjct: 307 QLDFEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVV 366
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
+D D G+N + S+ ED+PF++ ++ G+ + T LD E + Y
Sbjct: 367 ALFSVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEY 418
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
S TA V I V D+ND PEF+ Y + E V +V ATD D G N + YS+
Sbjct: 224 SGTAQVYIEVVDVNDNAPEFEQPFYRVQISEDSPISFLVVKVSATDVDTGVNGEISYSLF 283
Query: 141 --PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
++I F VD TG+IR K LD+EK Q Y
Sbjct: 284 QASDEISKTFKVDFLTGEIRLKKQLDFEKFQSY 316
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 83/197 (42%), Gaps = 39/197 (19%)
Query: 9 ALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL-------------D 55
A TS +LF R+ + + + V ATD+DSG V Y LL
Sbjct: 451 AFTQTSYTLF----VRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVS 506
Query: 56 NNTDAASYFNLDP-------ATEHQGPIQDEG--GLSSTATVNIRVTDINDKNP------ 100
NTD F L A E + D G LSS A V + V D ND +P
Sbjct: 507 INTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVRVLVLDANDNSPFVLYPL 566
Query: 101 EFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIR 156
+ S P VP + G V +V A D D GQNA + Y + E F V A+ G++R
Sbjct: 567 QNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVR 626
Query: 157 TNKAL---DYEKQQLYL 170
T + L D KQ+L +
Sbjct: 627 TARLLSERDAAKQRLVV 643
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L++ + + V+D+ND P F Y V E L +G V ATD D G NA V YS+
Sbjct: 432 LTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSL 491
Query: 141 --PED--IPFV----VDANTGDIRTNKALDYEKQQLYLERV 173
P+D +P ++ + G + ++LDYE Q + RV
Sbjct: 492 LPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRV 532
>gi|119582380|gb|EAW61976.1| protocadherin beta 8 [Homo sapiens]
Length = 801
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY + + +++V ATD D+G G + Y L + + + F +D T
Sbjct: 247 FYRVQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKK 306
Query: 71 ----------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
E +D GG S TV I+V D+ND PE + +PE V
Sbjct: 307 QLDFEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVV 366
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
+D D G+N + S+ ED+PF++ ++ G+ + T LD E + Y
Sbjct: 367 ALFSVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEY 418
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
S TA V I V D+ND PEF+ Y + E V +V ATD D G N + YS+
Sbjct: 224 SGTAQVYIEVVDVNDNAPEFEQPFYRVQISEDSPISFLVVKVSATDVDTGVNGEISYSLF 283
Query: 141 --PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
++I F VD TG+IR K LD+EK Q Y
Sbjct: 284 QASDEISKTFKVDFLTGEIRLKKQLDFEKFQSY 316
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 83/197 (42%), Gaps = 39/197 (19%)
Query: 9 ALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL-------------D 55
A TS +LF R+ + + + V ATD+DSG V Y LL
Sbjct: 451 AFTQTSYTLF----VRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVS 506
Query: 56 NNTDAASYFNLDP-------ATEHQGPIQDEG--GLSSTATVNIRVTDINDKNP------ 100
NTD F L A E + D G LSS A V + V D ND +P
Sbjct: 507 INTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVRVLVLDANDNSPFVLYPL 566
Query: 101 EFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIR 156
+ S P VP + G V +V A D D GQNA + Y + E F V A+ G++R
Sbjct: 567 QNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVR 626
Query: 157 TNKAL---DYEKQQLYL 170
T + L D KQ+L +
Sbjct: 627 TARLLSERDAAKQRLVV 643
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L++ + + V+D+ND P F Y V E L +G V ATD D G NA V YS+
Sbjct: 432 LTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSL 491
Query: 141 --PED--IPFV----VDANTGDIRTNKALDYEKQQLYLERV 173
P+D +P ++ + G + ++LDYE Q + RV
Sbjct: 492 LPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRV 532
>gi|296192993|ref|XP_002744345.1| PREDICTED: protocadherin beta-13 isoform 1 [Callithrix jacchus]
Length = 798
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 19/171 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY + +G +++V ATD D+G G + Y L + + F ++P T
Sbjct: 247 FYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASDEIGKTFKINPLTGEIELKK 306
Query: 71 ----------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
E +D G S TV I+V D+ND PE + +PE V
Sbjct: 307 QLDFENLQSYEVNVEARDAGTFSGKCTVLIQVMDVNDHAPEVTMSAFTSPIPEDAPETVV 366
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDA--NTGDIRTNKALDYEKQQLY 169
+D D +N + S+PED+PF++ + N + T + LD E + Y
Sbjct: 367 ALFSVSDLDSEENGKISCSIPEDLPFLLKSVGNFYTLLTERPLDRESRDEY 417
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
S TA V I V D+ND PEF+ Y + E G V +V ATD D G N + YS+
Sbjct: 224 SGTAQVYIEVLDVNDNAPEFEQPFYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLF 283
Query: 141 --PEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
++I F ++ TG+I K LD+E Q Y
Sbjct: 284 QASDEIGKTFKINPLTGEIELKKQLDFENLQSY 316
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 81/187 (43%), Gaps = 35/187 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL---DNNTDAASYFNLDPATEHQGP 75
Y R+ + + + V ATD+DSG V Y LL D + AS +++P H
Sbjct: 456 YTLFLRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINPDNGHLFA 515
Query: 76 IQ-----------------DEG--GLSSTATVNIRVTDINDKNP------EFQSLPYEFS 110
++ D G LSS A V + V D ND +P + S P
Sbjct: 516 LRSLDYEALQAFEFRVGATDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTEL 575
Query: 111 VPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL---DY 163
VP G + G V +V A D D GQNA + + + E F V A+ G++RT + L D
Sbjct: 576 VPRGAEPGYLVTKVVAVDGDSGQNAWLSFQLLKATEPGLFGVWAHNGEVRTARLLSERDA 635
Query: 164 EKQQLYL 170
K +L +
Sbjct: 636 AKHRLLV 642
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L + + + V+D+ND P F Y + E L +G V ATD D G NA V YS+
Sbjct: 431 LKTQLNITVLVSDVNDNAPTFTQTSYTLFLRENNSPALHIGSVSATDRDSGTNAQVTYSL 490
Query: 141 --PED--IPFV----VDANTGDIRTNKALDYEKQQLYLERV 173
P+D +P ++ + G + ++LDYE Q + RV
Sbjct: 491 LPPQDPHLPLASLVSINPDNGHLFALRSLDYEALQAFEFRV 531
>gi|291407994|ref|XP_002720202.1| PREDICTED: protocadherin 11 X-linked isoform 3 [Oryctolagus
cuniculus]
Length = 1340
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 80/174 (45%), Gaps = 26/174 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
F + + G L ++ ATD DSG+ + Y L TDA FNLD T
Sbjct: 470 FISISVPENNSPGTQLTKISATDADSGRNAEINYLL---GTDAPPEFNLDHRTGILTAVK 526
Query: 71 ----EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--QD 116
E Q +D G L + ATV + V D ND +P F Y F VPE +
Sbjct: 527 KLDREKQEKYYFTVLAKDNGIPPLITNATVLVTVLDQNDNSPIFTHNEYNFYVPENLPRH 586
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLY 169
G VG + TD D G+N+ V S+ + + F +D TG IR N + D EKQ+ Y
Sbjct: 587 G-TVGLITVTDPDYGENSAVTLSIVDVNDEFTIDPQTGVIRPNISFDREKQESY 639
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+ ++ + ++V D ND P F SVPE G + ++ ATDAD G+NA + Y +
Sbjct: 446 LNQSSMLLVKVKDENDNAPVFTQPFISISVPENNSPGTQLTKISATDADSGRNAEINYLL 505
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
D P F +D TG + K LD EKQ+ Y
Sbjct: 506 GTDAPPEFNLDHRTGILTAVKKLDREKQEKY 536
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 10/98 (10%)
Query: 78 DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
++GG SSTA + + V D ND P F+ E S+PE G +V ++HATDAD G+N
Sbjct: 222 EDGGFPQRSSTAILQVSVADTNDNRPVFKENEIEVSIPENAPVGTSVTQLHATDADIGEN 281
Query: 134 AVVYYSVPEDIP------FVVDANTGDIRTNKALDYEK 165
A +++ + F ++ TG I + LD E+
Sbjct: 282 AKIHFYFSNLVSNIAKRLFHLNTTTGLITVKEPLDREE 319
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 64/150 (42%), Gaps = 30/150 (20%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP---------------I 76
T+ + TD D G+ V ++D N + F +DP T P +
Sbjct: 588 TVGLITVTDPDYGENSAVTLSIVDVNDE----FTIDPQTGVIRPNISFDREKQESYTFYV 643
Query: 77 QDEGG----LSSTATVNIRVTDINDKNPEFQSLP----YEFSVPEGQDGLAVGRVHATDA 128
+ E G SSTA V I V D+ND P F P YE +P G V +V A D
Sbjct: 644 KAEDGGRVSRSSTAKVTINVVDVNDNKPVFVIPPSNYSYELVLPSTNPGAVVFQVVAVDN 703
Query: 129 DEGQNAVVYYSVPEDIP---FVVDANTGDI 155
D G NA + YS+ F++D +G+I
Sbjct: 704 DTGMNAEIRYSIAGGNAKGLFIIDQTSGNI 733
Score = 35.8 bits (81), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 30/175 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEY-----------RLLDNNTDAASYFNLDPATEHQGPIQ 77
+G ++ Q+ ATD D G+ + + RL NT +P + P
Sbjct: 264 VGTSVTQLHATDADIGENAKIHFYFSNLVSNIAKRLFHLNTTTGLITVKEPLDREEAPSH 323
Query: 78 -------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA--------VGR 122
D G + + A V + VTDIND P + Y + G L+ V
Sbjct: 324 KLLVLATDGGSMPARAMVLVNVTDINDNVPSID-IRYIINPTNGTVVLSENAPLNTKVAL 382
Query: 123 VHATDADEGQNAVVYYSVPEDIPF---VVDANTGDIRTNKALDYEKQQLYLERVF 174
+ TD D N V ++PF V +N + T LDYE + Y ++
Sbjct: 383 ITVTDKDADHNGRVTCFTDHEVPFRLRPVFSNQFLLETAAYLDYESTREYAIKLL 437
>gi|157409|gb|AAA28530.1| fat protein [Drosophila melanogaster]
Length = 5147
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 26/175 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + + +G T++ V ATD D+G G++ Y + N F++D T
Sbjct: 3234 YQVIVPENEPVGSTILTVGATDDDTGPNGMLRYSISGGNERQD--FSVDERTGGIVIQQQ 3291
Query: 71 ---------EHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
+QD G LSS A + I +TD+ND P F Y +PE + G
Sbjct: 3292 LDYDLIQEYHLNITVQDLGYHPLSSVAMLTIILTDVNDNPPVFNHKEYHCYIPENKPVGT 3351
Query: 119 AVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V + HATD D +NA+++Y S P+ F+++ + G I + + DYE++++Y
Sbjct: 3352 FVFQAHATDKDSPKNAIIHYAFLPSGPDRHFFIMNQSNGTISSAVSFDYEERRIY 3406
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 80/163 (49%), Gaps = 25/163 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EH 72
++G T+ ++A D D+ G V + L+D + F L+P+T ++
Sbjct: 1837 QIGHTISTLRAHDPDT--LGSVTFLLMDGHD---GKFLLEPSTGKLILNDTLDRETKSKY 1891
Query: 73 QGPIQDEGGLSST-ATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE 130
+ I+ G+ T A I+V+D ND P F+ Y F +PE Q G VG++ A DAD
Sbjct: 1892 ELRIRVSDGVQYTEAYATIQVSDTNDNPPLFEDTVYSFDIPENAQRGYQVGQIVARDADL 1951
Query: 131 GQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYL 170
GQNA + Y V D F ++ TG + LDYE+ Q Y+
Sbjct: 1952 GQNAQLSYGVVSDWANDVFSLNPQTGMLTLTARLDYEEVQHYI 1994
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 84/172 (48%), Gaps = 18/172 (10%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDN------------NTDAASYFNLDPATEH-QG 74
E+G +++V ++D D G Y +N N A + + + E+
Sbjct: 2926 EIGSFVIRVTSSDLDLGANANASYSFSENPGEKFRIEPQSGNITVAGHLDREQQDEYILK 2985
Query: 75 PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD-EGQ 132
+ +G + + I + D ND PEF+ Y FS PE Q +A VG++ ATD D +G
Sbjct: 2986 VVASDGAWRAETPITITIQDQNDNAPEFEHSFYSFSFPELQQSIALVGQIIATDRDKQGP 3045
Query: 133 NAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYL--ERVFLISKFAT 181
N+V+ YS+ + P F +D TG++ + KA+ ++ Q E ++ ++ AT
Sbjct: 3046 NSVISYSLQQPSPMFSIDPATGEVFSKKAVRFKHSQYVRSPENMYALTVLAT 3097
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV 140
L V + VTD+ND PEF PY ++ EG +G + V DADEG N VYYS+
Sbjct: 1258 LQDKVKVKVIVTDVNDNAPEFLRAPYHVTISEGASEGTHIMHVFTQDADEGLNGDVYYSL 1317
Query: 141 P---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
E F +D+ TG + + LD E Q+++
Sbjct: 1318 AKGNEAGQFNLDSATGQLSLARRLDRESQEIH 1349
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 68/159 (42%), Gaps = 26/159 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------------EHQ 73
G +M V D D G G V Y L N A FNLD AT H
Sbjct: 1294 GTHIMHVFTQDADEGLNGDVYYSLAKGN--EAGQFNLDSATGQLSLARRLDRESQEIHHL 1351
Query: 74 GPIQDEGGL----SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDA 128
+ + L S+ A++ I V D ND PEF E SV E G + R +DA
Sbjct: 1352 IVVAKDAALKHPLSTNASITIVVLDENDNAPEFTQSSSEVSVLETSPTGTELMRFRGSDA 1411
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYE 164
D+G N+ V +S+ F +D+ TG + +K LDYE
Sbjct: 1412 DQGVNSQVVFSISAGNRRDTFHIDSITGSLYLHKPLDYE 1450
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 70/159 (44%), Gaps = 21/159 (13%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD--------------AASYFNLDPATEHQG 74
+G + Q ATDKDS K ++ Y L + D +A F+ + +
Sbjct: 3349 VGTFVFQAHATDKDSPKNAIIHYAFLPSGPDRHFFIMNQSNGTISSAVSFDYEERRIYTL 3408
Query: 75 PIQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
I+ + + S A + + V +N+ P+F + F V E G VG V ATD D
Sbjct: 3409 QIKAKNPDSSMESYANLYVHVLGVNEFYPQFLQPVFHFDVSETSAVGTRVGAVQATDKDS 3468
Query: 131 GQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQ 166
G++ VYY + D F +D NTG I + LD E Q
Sbjct: 3469 GEDGRVYYLLVGSSNDKGFRIDTNTGLIYVARHLDRETQ 3507
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 30/170 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY-----FNLDPATEHQGPIQD--EGG 81
+ ++ VKA D D G+ G ++Y + + + F+L+P T+ Q + D +
Sbjct: 2181 INTVVIAVKAVDNDEGRNGYIDYLMKEARDEDMGQSDPLPFSLNP-TDGQLRVVDALDRE 2239
Query: 82 LSSTATVNI------------------RVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR 122
L S+ +NI R+ D ND +P F Y SV E G V +
Sbjct: 2240 LRSSYLLNITARDRGEPPQSTESQLLVRILDENDNSPVFDPKQYSASVAENASIGAMVLQ 2299
Query: 123 VHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V ATD DEG N + YS+ ++ F + +TG +R K L+YE+ Y
Sbjct: 2300 VSATDVDEGANGRIRYSIVLGDQNHDFSISEDTGVVRVAKNLNYERLSRY 2349
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 78/176 (44%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL--DNNTD-----------AASYFN 65
Y A + +G ++QV ATD D G G + Y ++ D N D A N
Sbjct: 2283 YSASVAENASIGAMVLQVSATDVDEGANGRIRYSIVLGDQNHDFSISEDTGVVRVAKNLN 2342
Query: 66 LDPATEHQGPIQD-----EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ---DG 117
+ + + ++ E TA + I + DIND P F PY V E +G
Sbjct: 2343 YERLSRYSLTVRAEDCALENPAGDTAELTINILDINDNRPTFLDSPYLARVMENTVPPNG 2402
Query: 118 LAVGRVHATDADEGQ-NAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
V V+A DAD N+ V Y + E D+ F ++A++GDI K LD E+Q Y
Sbjct: 2403 GYVLTVNAYDADTPPLNSQVRYFLKEGDSDL-FRINASSGDIALLKPLDREQQSEY 2457
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 73/165 (44%), Gaps = 26/165 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------EHQGP 75
+ G + Q+ A D D G+ + Y ++ + A F+L+P T E Q
Sbjct: 1936 QRGYQVGQIVARDADLGQNAQLSYGVVSDW--ANDVFSLNPQTGMLTLTARLDYEEVQHY 1993
Query: 76 I-----QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
I QD G LS+T TV V D+ND P F + Y V E V V A D
Sbjct: 1994 ILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSYSSEVFENVPIATEVVTVSAKD 2053
Query: 128 ADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D G N ++ YS+ D F +D+N G IRT + LD E + Y
Sbjct: 2054 IDSGNNGLIEYSITAGDVDSEFGIDSN-GTIRTRRNLDREHRSTY 2097
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 79/179 (44%), Gaps = 32/179 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE---HQGP 75
Y A+ + G + + ATD+D+G V Y +L N +F++DP T GP
Sbjct: 499 YSAVLSELAPTGSFVASITATDEDTGVNAQVHYDILSGN--ELKWFSMDPLTGLIVTTGP 556
Query: 76 ----IQDEGGLSSTAT------------VNIRVTDINDKNPEFQSLPYEFSVPEGQDG-- 117
I+D LS +A + + + D ND+ P+F E +V G+D
Sbjct: 557 LDREIRDTVELSISARDGGPNPKFAYTQLKVIILDENDEAPQFSQ--REQNVTLGEDAPP 614
Query: 118 -LAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
V + ATD D+G N V +++ + F +DA TG + T + LD EK Y
Sbjct: 615 QTIVALMTATDHDQGTNGSVTFALAPSVERLYPLQFALDALTGQLTTRRPLDREKMSQY 673
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 19/177 (10%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLD 67
+ L Y A ++ + VKA+D+DSG G V YRL ++ Y +
Sbjct: 2811 EQLIYTAEVLEEESPPQLIAVVKASDRDSGDNGNVIYRLQNDFDGTFEITESGEIYTRMR 2870
Query: 68 PATEHQGPIQ------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
E G D+G L+ TA+V + + D ND P+F L + +V E + G
Sbjct: 2871 LDREEIGDYAFVVEAVDQGVPHLTGTASVLLHLLDKNDNPPKFTRL-FSLNVTENAEIGS 2929
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERV 173
V RV ++D D G NA YS E+ F ++ +G+I LD E+Q Y+ +V
Sbjct: 2930 FVIRVTSSDLDLGANANASYSFSENPGEKFRIEPQSGNITVAGHLDREQQDEYILKV 2986
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 66/158 (41%), Gaps = 30/158 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y A R+ G ++ +ATDKD G + + LL + F++D T G I
Sbjct: 2496 YHATVRENLPSGTHVLTPRATDKDEGLNAKLRFNLLGEH---MHRFHIDSET---GEIST 2549
Query: 79 EGGL-----------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG- 114
L +S+ + I V+D+ND P+F S Y +VPE
Sbjct: 2550 ATTLDREETSVYHLTLMAQDSSITEPRASSVNLTISVSDVNDNIPKFDSTTYNVAVPERI 2609
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANT 152
G V A D D+G+NAVV+Y++ D NT
Sbjct: 2610 SKGEFVFGARALDLDDGENAVVHYTISGRDQHYFDINT 2647
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 26/159 (16%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA--------------------SYFNLD 67
++ + ATD D G G + Y +++ NT+ Y+ L
Sbjct: 1063 KVNTRFFALAATDIDLGDNGRISYEIIEGNTERMFGVFPDGYLFVRAPLDREERDYYALT 1122
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG-LAVGRVHAT 126
+ G + SS V I V D ND P+F + + FS+PE VG++ A
Sbjct: 1123 VSCRDAG----QPSRSSVVPVVIHVIDENDNAPQFTNSTFTFSIPENAPADTFVGKLTAV 1178
Query: 127 DADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
D D G+NA + +++ F +D G I+T + D E
Sbjct: 1179 DRDIGRNAELSFTLSSQTQDFTIDTRNGFIKTLRPFDRE 1217
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV 140
L+ T V + V DIND +P F+ Y +V E G V ATD DEG NA + +++
Sbjct: 2471 LTGTGIVRVEVQDINDNDPVFELQSYHATVRENLPSGTHVLTPRATDKDEGLNAKLRFNL 2530
Query: 141 PED--IPFVVDANTGDIRTNKALDYEKQQLY 169
+ F +D+ TG+I T LD E+ +Y
Sbjct: 2531 LGEHMHRFHIDSETGEISTATTLDREETSVY 2561
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 12/109 (11%)
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQS-----LPYEFSVPEGQDGLAVGRV 123
AT+ P E LS+ V + V DIND P F S LP +FS +G AV +V
Sbjct: 1570 ATDRAQP--SERQLSTEKLVTVIVEDINDNAPVFVSMNAAILPPKFSTSKGS-STAVMQV 1626
Query: 124 HATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
HA DAD N +V Y + P+++ F + NTG I ++++ Y
Sbjct: 1627 HAKDADSSSNGLVTYEIVSGPQEL-FKLQRNTGIITFTPGPQFKQEVRY 1674
Score = 42.7 bits (99), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVV 136
Q + LSST V I + D+ND+ P F S + V V A D DEG+N +
Sbjct: 2142 QKQQRLSSTVKVTILIKDVNDEVPVFVSANETAIMENVAINTVVIAVKAVDNDEGRNGYI 2201
Query: 137 YYSVPE----------DIPFVVDANTGDIRTNKALDYEKQQLYL 170
Y + E +PF ++ G +R ALD E + YL
Sbjct: 2202 DYLMKEARDEDMGQSDPLPFSLNPTDGQLRVVDALDRELRSSYL 2245
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP---ED 143
V I VT N P F Y+ VPE + G + V ATD D G N ++ YS+ E
Sbjct: 3215 VVIVVTGENMDTPRFSVNSYQVIVPENEPVGSTILTVGATDDDTGPNGMLRYSISGGNER 3274
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLY 169
F VD TG I + LDY+ Q Y
Sbjct: 3275 QDFSVDERTGGIVIQQQLDYDLIQEY 3300
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 71/167 (42%), Gaps = 29/167 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF-----------NLDPATEHQ---- 73
+G + V+ATDKDSG+ G V Y L+ ++ D +LD T+++
Sbjct: 3454 VGTRVGAVQATDKDSGEDGRVYYLLVGSSNDKGFRIDTNTGLIYVARHLDRETQNRVVLT 3513
Query: 74 ------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
G I+ G + A V I + D ND PEF Y ++ E G V V A
Sbjct: 3514 VMAKNYGSIR--GNDTDEAQVIISIQDGNDP-PEFIKHYYTSTISEAAPVGTKVTTVKAI 3570
Query: 127 DAD-EGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D D QN YS+ F +D TG+I T LD E+ Y
Sbjct: 3571 DKDVRTQNNQFSYSIINGNLKQSFKIDVQTGEISTASRLDREETSTY 3617
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 64/160 (40%), Gaps = 27/160 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGP- 75
G + V D DSG G R++ N +F L+ A E G
Sbjct: 403 GTVVAAVAVKDSDSGLNGRTSVRIVSGN--ELGHFRLEEAADLHIVRVNGVLDREEIGKY 460
Query: 76 -----IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
D+G ++TA + I V D+ND P F+ Y + E G V + ATD
Sbjct: 461 NLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPTGSFVASITATD 520
Query: 128 ADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
D G NA V+Y + E F +D TG I T LD E
Sbjct: 521 EDTGVNAQVHYDILSGNELKWFSMDPLTGLIVTTGPLDRE 560
Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Query: 80 GGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVV 136
GG T+ +RVT D ND P+F P+ ++V E Q G + + A D D +
Sbjct: 1799 GGQPRTSRTKVRVTVLDKNDSPPQFLDTPFVYNVSEDLQIGHTISTLRAHDPDTLGSVTF 1858
Query: 137 YYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
D F+++ +TG + N LD E + Y R+
Sbjct: 1859 LLMDGHDGKFLLEPSTGKLILNDTLDRETKSKYELRI 1895
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 69/165 (41%), Gaps = 28/165 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLV-EYRLLDNNTDA-------------ASYFNLDPA----TE 71
G L+ ATD D G+ G+ +Y ++ N D SY +L+ E
Sbjct: 172 GTRLLLDAATDADVGENGVTDQYEIVAGNVDNKFRLVTTANPSGDTSYLHLETTGNLDRE 231
Query: 72 HQGPIQ-----DEGGLSST---ATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGR 122
+G Q +GG VN+ + D+ND P F Y S+ E G V
Sbjct: 232 SRGSYQLNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSDYNVSLNETALPGTPVVT 291
Query: 123 VHATDADEGQNA-VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQ 166
V A+D D G N+ + YY + F V+ TG I T + ++ +Q
Sbjct: 292 VMASDNDLGDNSKITYYLAETEHQFTVNPETGVISTTERVNCPQQ 336
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 68/167 (40%), Gaps = 30/167 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYFNLDPATEHQGP-------I 76
L+ V A+DKD G L+EYRL LD + A S PA+ H P
Sbjct: 736 LLHVTASDKDDGDNALIEYRLESGGEGLFQLDARSGAISLRGDAPASMHWKPHYKLLVSA 795
Query: 77 QDEGGLSST--ATVNIRVTDIND--KNPEFQSLPYEFSVPE-------GQDGLAVGRVHA 125
+D G S A V I + + + + Q+ YEF + E Q VG V
Sbjct: 796 RDAGQRRSQQDAIVEIVLKSKLEMLECGQAQAGGYEFQMVEDHEQQRNSQPNREVGIVQV 855
Query: 126 TDADEGQNAVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLY 169
+ N+ + Y + + F +D +G I T + LD E+Q Y
Sbjct: 856 KSTNGKANSHIEYDIIQGDRAQNFRIDTRSGRISTARPLDREEQANY 902
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 12/85 (14%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR----------VHATDADEGQ 132
S+TATV + V D+ND +P+F Y +S+ + D + + + V A+D D+G
Sbjct: 689 SATATVWLNVADVNDNDPQFYPRHYIYSLTDDDDDIKLKKEVEKERILLHVTASDKDDGD 748
Query: 133 NAVVYYSVPE--DIPFVVDANTGDI 155
NA++ Y + + F +DA +G I
Sbjct: 749 NALIEYRLESGGEGLFQLDARSGAI 773
>gi|357625817|gb|EHJ76125.1| hypothetical protein KGM_06014 [Danaus plexippus]
Length = 2024
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 79/171 (46%), Gaps = 30/171 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLD-----------NNTDAASYF------------- 64
+G T++++ A D DSG G + + L N A +F
Sbjct: 1004 VGTTILKLNAIDMDSGINGQLRHEFLSELFMPPYAFSGNAFQAKRFFVINERHGHVVVAR 1063
Query: 65 NLDPATEHQGPIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV-G 121
L P +E + I D GGLS T+ + V D+ND P F+ Y F+V E Q + G
Sbjct: 1064 ALPPESEFRLNITVIDGGGLSDLITIRLFVKDVNDHYPMFKKSWYNFNVEEAQYSRRILG 1123
Query: 122 RVHATDADEGQNA-VVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ATDAD GQN+ + Y+ P +D+PF + G N LD EK+ Y
Sbjct: 1124 KVDATDADFGQNSNLTYFIQPSSKDLPFEISPLGGVFSVNGILDREKEDKY 1174
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 76 IQDEGGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVP-EGQDGLAVGRVHATDADEGQN 133
I + L S TV + + D ND NP F S YEFS+ + + G +G V A D D G+N
Sbjct: 481 IDESHQLMSYVTVEVTLLDANDNNPVFIPSNLYEFSIKADAKIGTEIGTVKAVDPDLGRN 540
Query: 134 AVVYYSVPE------DIPFVVDANTGDI 155
VV Y + PF +DA TG I
Sbjct: 541 GVVLYDLQRTSNLTITSPFQIDAQTGVI 568
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 78/189 (41%), Gaps = 30/189 (15%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----EH 72
FY + + H+ + ++A D+D+G + Y L+ N F L P E
Sbjct: 245 FYPILGKRIHKELIFDKPIRAFDQDAGVAAPIRYELVSGN--ERRLFLLSPLNGSLFLEK 302
Query: 73 QGPIQDEGGL-------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
+ + E L ++ A V I + D+ND P+F+ Y S+ E
Sbjct: 303 EVDLDAEVALPGNTFVLQIQASQVDNPLKTAQARVEIEIQDLNDNLPDFEVDFYNISIVE 362
Query: 114 G-QDGLAVGRVHATDADEGQNAVVYYSVPEDI-PFVVDANTG--DIRTNKALDYEKQQLY 169
+G +V +V A+D D+G N Y + + I F +D TG +R LD E+
Sbjct: 363 NLPNGFSVLQVMASDKDQGDNGEFTYQLNDPIAAFSIDPRTGWLTVRNQTELDREQHSSL 422
Query: 170 LERVFLISK 178
+V+ K
Sbjct: 423 RMKVYAREK 431
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 33/119 (27%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLP--YEFSVPEGQD----------------------- 116
LSS+ TV I+V D+ND P+F + E+ PE +
Sbjct: 1189 LSSSVTVEIQVLDVNDNAPKFFAYDELLEWKHPEADEISNHNFESVMMIPVYKATLDENA 1248
Query: 117 --GLAVGRVHATDAD--EGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQ 167
G V RV+A D+D N ++ YS+P+ F +D+ G + T LDYE Q+
Sbjct: 1249 PIGTTVTRVYANDSDFIGNGNGLILYSLPQRKNQVNMFSIDSKEGFLTTTTRLDYESQK 1307
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 75 PIQD---EGGLSSTATVNIRVTDINDKNPEFQS--LPYEFSVPEGQD-GLAVGRVHATDA 128
P+ D EG V +R+ D+ND P+F + P ++P G V ++ A DA
Sbjct: 1441 PVSDDVLEGMTKYDVKVVVRIKDVNDNAPKFVNGGRPMVTAIPTTAPFGYEVIQLQAVDA 1500
Query: 129 DEGQNAVVYYSV--PEDIPFVVDANTGDIRT 157
D G NA + Y V E F VD +G +R
Sbjct: 1501 DIGHNADIRYQVINSESARFTVDQVSGRVRV 1531
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPE----GQDGLAVGRVHATDADEGQNAVVYYSVPED 143
+ + V D ND P F +E S+ E G + ++HA+D D GQNAV Y++ D
Sbjct: 820 ITVHVDDENDCPPVFDLPAFEGSIVENSKKGTEVKMTNKIHASDNDMGQNAVFMYTLFGD 879
Query: 144 --IPFVVDANTGDI-RTNKALDYEKQQLYLERV 173
F V+ +TG + LD E++ YL ++
Sbjct: 880 GHDQFSVNEDTGVVFFIGNKLDREEKNQYLLKI 912
>gi|347543907|gb|AEP02526.1| CDH23, partial [Myotis altarium]
Length = 3209
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 78/160 (48%), Gaps = 27/160 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD------------PATEHQG--- 74
G ++QV+ATD+D G ++ Y + N D F +D P EHQ
Sbjct: 1534 GTAVVQVRATDRDIGINSVLSYYITAGNDDMT--FRMDRISGEITTRPAPPDREHQSFYH 1591
Query: 75 ---PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATD 127
++DEG LS+T V + + D ND P FQ YE + EG D + ++ + A D
Sbjct: 1592 LVVTVEDEGTPPLSATTHVYVTIVDENDNAPVFQQPHYEILLDEGPDTIDASLVTIQALD 1651
Query: 128 ADEGQNAVVYYS-VPEDI--PFVVDANTGDIRTNKALDYE 164
DEG N V Y+ + +I F +D +TG IR K LDYE
Sbjct: 1652 LDEGPNGTVTYAIIAGNIIDTFHIDRHTGVIRAAKELDYE 1691
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
+S+ATV + + D+ND +P FQ+LP+ V EG G++V +V A D DEG N +V Y +
Sbjct: 861 TSSATVFVNLLDLNDNDPIFQNLPFVAEVLEGTPAGVSVYQVVAIDLDEGLNGLVSYRMQ 920
Query: 142 EDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
+P F++++++G + T LD E+ Y RV
Sbjct: 921 VGMPRMDFLINSSSGVVVTTTELDRERIAQYQLRV 955
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 31/155 (20%)
Query: 38 ATDKDSGKFGLVEYRLLDNN-----------------------TDAASYFNLDPATEHQG 74
A D+DSG G VEY ++D + + +++NL +G
Sbjct: 1758 AHDRDSGPNGQVEYSIVDGDPLGEFLISPVEGVLRVRKDVELDRETIAFYNLTICARDRG 1817
Query: 75 PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQN 133
LSST V IRV DIND +P +LP ++ E + V + A+DAD G N
Sbjct: 1818 ----VPPLSSTMLVGIRVLDINDNDPVLLNLPMNVTISENSPVSSFVAHILASDADSGCN 1873
Query: 134 AVVYYSVP---EDIPFVVDANTGDIRTNKALDYEK 165
A++ +++ + F ++A +G + N+ LD E+
Sbjct: 1874 ALLTFNITAGNRERAFTINATSGIVTVNRPLDRER 1908
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 22/166 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G +++Q++ATD D G+FG V YR+L N ++ +GP
Sbjct: 1108 GHSIVQLQATDADEGEFGRVWYRILQGNHGNHFRIHVSDGLLVRGPQPLDREQDSSHVLI 1167
Query: 77 -----QDEGGLSSTATVNIRVTDINDKNPEFQSLPY-EFSVPEGQD-GLAVGRVHATDAD 129
D G + S+ V + V D+ND+ P F Y ++ E G +V V ATD D
Sbjct: 1168 VEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYSRLALRETAGIGTSVIVVKATDRD 1227
Query: 130 EGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
G ++ Y + + F +D +TG I T LDYE + YL V
Sbjct: 1228 TGDGGLINYRILSGAEGKFEIDESTGLIITVDYLDYETKTSYLMNV 1273
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 22/164 (13%)
Query: 9 ALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD- 67
A +M +D L +G + A + D+G L + LD T S F ++
Sbjct: 49 ARDMDNDPLVFGVSGEEASRF-------FAVEPDTGVVWL--RQPLDRET--KSEFTVEF 97
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
++HQG I T VNI+V D+ND P F + PY +PE G + V+AT
Sbjct: 98 SVSDHQGVI--------TRKVNIQVGDVNDNAPTFHNQPYSVRIPEDTPVGTPIFIVNAT 149
Query: 127 DADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
D D G V YS P F +D+ G + + LDYE Q Y
Sbjct: 150 DPDLGAGGSVLYSFQPPSPFFAIDSARGIVTVIQELDYETTQAY 193
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 33/168 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------------ 70
+G ++ V A+D DSG F ++EY L+ D F ++P T
Sbjct: 2407 VGTVILTVTASDADSGNFAVIEYSLV----DGEGKFAINPTTGDIYVLSSLDREKKDHYI 2462
Query: 71 ------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRV 123
++ G + +S V I+V D+ND P+F + SV E + G +V +
Sbjct: 2463 LTALAKDNPGDVASNRRENSVQVV-IQVLDVNDCRPQFSKPQFSTSVYENEPAGTSVITM 2521
Query: 124 HATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKAL-DYEKQQL 168
ATD DEG N V YS+ P + F VD ++G + T + L YE+ L
Sbjct: 2522 MATDQDEGSNGEVTYSLEGPGEEAFHVDIDSGLVTTKRPLHSYERFNL 2569
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 30/166 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLD-------------------NNT---DAASYFNLD 67
G TL+ V A D D G GL+ Y LLD N T + + N
Sbjct: 2302 GTTLIAVSAVDPDKGLNGLITYSLLDLMPPGYVQLEDSSAGKVIANRTVDYEEVHWLNFT 2361
Query: 68 -PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHA 125
A+++ P + ++ V + + DIND NP F Y+ +V E G + V A
Sbjct: 2362 VRASDNGSPPR-----AAEIPVYLEIVDINDNNPIFDEPSYQEAVYEDVPVGTVILTVTA 2416
Query: 126 TDADEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYL 170
+DAD G AV+ YS+ + + F ++ TGDI +LD EK+ Y+
Sbjct: 2417 SDADSGNFAVIEYSLVDGEGKFAINPTTGDIYVLSSLDREKKDHYI 2462
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 54 LDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
LD T AA L+ GP+ + TATV + V D+ND P F YE SVPE
Sbjct: 1048 LDRETTAAYTLVLEAI--DNGPVGKRR--TGTATVFVTVLDVNDNRPIFLQSSYEASVPE 1103
Query: 114 G-QDGLAVGRVHATDADEGQNAVVYYSV 140
+G ++ ++ ATDADEG+ V+Y +
Sbjct: 1104 DIPEGHSIVQLQATDADEGEFGRVWYRI 1131
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 14/105 (13%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPY-----EFSVPEGQDGLAVGRVHATDADEGQNAVVY 137
+ ATVNI + DIND +P ++ PY E + P+ V V A D D G+N +
Sbjct: 749 TGIATVNITLLDINDNHPTWKDAPYYINLVEMTPPDSD----VTTVVAVDPDLGENGTLV 804
Query: 138 YSV-PEDIPFVVDANTGDIRTNKA-LDYEK---QQLYLERVFLIS 177
YS+ P + + ++++TG IRT LD E Q+ L R +IS
Sbjct: 805 YSIQPPNKFYSINSSTGKIRTTHVMLDRENPDPQEAELMRKIIIS 849
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 70/166 (42%), Gaps = 33/166 (19%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT--------------------- 70
+L+ ++A D D G G V Y ++ N F++D T
Sbjct: 1643 SLVTIQALDLDEGPNGTVTYAIIAGNI--IDTFHIDRHTGVIRAAKELDYEICHGRYTLI 1700
Query: 71 ---EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYE--FSVPEGQDGLAVGRVHA 125
Q PI L+ST TV + V DIND P F YE F V EGQ G V A
Sbjct: 1701 VTATDQCPILSRR-LTSTTTVLVNVNDINDNVPTFPR-DYEGPFDVTEGQPGPRVWTFLA 1758
Query: 126 TDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
D D G N V YS+ + P F++ G +R K ++ +++ +
Sbjct: 1759 HDRDSGPNGQVEYSIVDGDPLGEFLISPVEGVLRVRKDVELDRETI 1804
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 73/174 (41%), Gaps = 34/174 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------ASYFNLDPATEHQGPIQDEGGL 82
G T+ + A D+D G+ + Y ++ NT++ + L+ + + P+ G +
Sbjct: 244 GTTVRVITAIDQDKGRPRGIGYTIVSGNTNSIFALDYISGALTLNGLLDRENPLYSHGFI 303
Query: 83 -----------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGR-V 123
+ T T NI V DIND PEF S Y ++ E Q G A+ +
Sbjct: 304 LTVKGTELNDDRTPSDATVTTTFNILVIDINDNAPEFNSSEYSVAITELAQVGFALPLFI 363
Query: 124 HATDADEGQNAV--VYYSVPEDIPFVVDANT----GDIRTNKA--LDYEKQQLY 169
D DEG N++ VY F++ + DIR A LDYE + Y
Sbjct: 364 QVVDRDEGLNSMFEVYLVGNNSHHFIISPTSVQGKADIRIRVAIPLDYETVERY 417
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 59/141 (41%), Gaps = 22/141 (15%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI- 76
Y + +G +++ V ATD D G FG V Y +D F+LD T I
Sbjct: 454 LYNVSLYENVTVGTSVLTVLATDNDVGTFGEVSYFF----SDDPDRFSLDKDTGLIMLIA 509
Query: 77 ----------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA- 119
+D GG +T V I V D+ND P FQ Y ++ E + +
Sbjct: 510 KLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQ 569
Query: 120 VGRVHATDADEGQNAVVYYSV 140
+ R+ ATD D N + YS+
Sbjct: 570 LVRLRATDEDSPPNNQITYSI 590
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 67/161 (41%), Gaps = 21/161 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYFNLDPATEHQGPIQ--- 77
GV++ QV A D D G GLV YR+ L N++ + E Q
Sbjct: 896 GVSVYQVVAIDLDEGLNGLVSYRMQVGMPRMDFLINSSSGVVVTTTELDRERIAQYQLRV 955
Query: 78 ---DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEG 131
D G SST+T+ IRV D+ND+ P F Y SV E V ++ TD D G
Sbjct: 956 VATDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVSVSEDVPRDFRVVWLNCTDNDVG 1015
Query: 132 QNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
NA + Y + D F V +RT LD E Y
Sbjct: 1016 LNAELSYFITGGNVDGKFSVGYRDAMVRTVVNLDRETTAAY 1056
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 74/167 (44%), Gaps = 31/167 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA-TEHQGPIQD---------- 78
G +++ + ATD+D G G V Y L + + A + ++D + P+
Sbjct: 2515 GTSVITMMATDQDEGSNGEVTYSL-EGPGEEAFHVDIDSGLVTTKRPLHSYERFNLTVVA 2573
Query: 79 -EGG---LSSTATVNIRVTDINDKNPEFQSLP------YEFSVPEGQDGLAVGRVHATDA 128
+GG L T + + V D+ND P F P + VP + V V+ATD
Sbjct: 2574 TDGGEPPLWGTTMLLVEVIDVNDNRPVFVRPPNGTIVHIKEEVPLRSN---VYEVYATDQ 2630
Query: 129 DEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
DEG N V YS + F +D +G I+T + LD EKQ +Y
Sbjct: 2631 DEGLNGAVRYSFLKTTGNRDWEYFTIDPISGLIQTAQRLDREKQAVY 2677
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 31/181 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD---------- 67
+ GA+ R+ L++++ATD+DS + Y ++ N + SYF++
Sbjct: 556 YVGAL-RENEPSVTQLVRLRATDEDSPPNNQITYSIV-NASAFGSYFDISVYEGYAVISV 613
Query: 68 --PATEHQGP---------IQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
P Q P +D G L+ST V I V D ND P F Y SV E
Sbjct: 614 SRPLDYEQIPNGLIYLTVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVES 673
Query: 115 -QDGLAVGRVHATDADE----GQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G V ++ATD D GQ +++ YS+ F + A +G++ T LD E + Y
Sbjct: 674 IMAGATVLILNATDLDRSREYGQESII-YSLEGSSQFRIGARSGELTTTSLLDREAKSEY 732
Query: 170 L 170
+
Sbjct: 733 I 733
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 72/173 (41%), Gaps = 36/173 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------EHQGPIQ 77
G +++QV ATD+DSG G + YR+ A F + P T E Q +
Sbjct: 2075 GFSVLQVTATDEDSGLNGELVYRI---EAGAQDRFLIHPVTGVIRVGNVTIDREEQESYR 2131
Query: 78 ------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDA 128
D G LS TA + I + DIND PEF + SV E + G + V A D
Sbjct: 2132 LTVVASDRGTVPLSGTAIITILIDDINDCRPEFLNPIQTVSVLESAEPGTVIANVTAIDR 2191
Query: 129 D---EGQNAVVYYSVPED----IP-----FVVDANTGDIRTNKALDYEKQQLY 169
D + + +V +D +P F V+ NTG + L+ E Y
Sbjct: 2192 DLNPKLEYHIVSIVAKDDTDRLVPDQEDAFAVNINTGSVLVKSPLNRELVATY 2244
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 80/189 (42%), Gaps = 35/189 (18%)
Query: 10 LEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA 69
++TSDS + +G + VKA D D+G G V + L N A F +
Sbjct: 1408 FDVTSDS---AVSVPEDCPVGQRVATVKAQDPDAGSNGQVVFSLASGNIAGA--FEIVTT 1462
Query: 70 TEHQGPI--------------------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPY 107
+ G + D G + + + + D+ND P +S P+
Sbjct: 1463 NDSIGEVFVARPLDREELDHYILKVVASDRGTPPRKKSHILQVTILDVNDNPPVIES-PF 1521
Query: 108 EFSVPEGQD---GLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKA- 160
++V ++ G AV +V ATD D G N+V+ Y + +D+ F +D +G+I T A
Sbjct: 1522 GYNVSVNENVGGGTAVVQVRATDRDIGINSVLSYYITAGNDDMTFRMDRISGEITTRPAP 1581
Query: 161 LDYEKQQLY 169
D E Q Y
Sbjct: 1582 PDREHQSFY 1590
Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 30/177 (16%)
Query: 19 YGAMA-RDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y +A R+ +G +++ VKATD+D+G GL+ YR+L + A F +D +T
Sbjct: 1203 YSRLALRETAGIGTSVIVVKATDRDTGDGGLINYRIL---SGAEGKFEIDESTGLIITVD 1259
Query: 71 --EHQGPIQDEGGLSST--------ATVNIRVTDIN--DKNPEFQSLPYEFSVPEGQD-G 117
+++ +S+T A ++ +T +N D++ +F + YE ++ E G
Sbjct: 1260 YLDYETKTSYLMNVSATDQAPPFNQAFCSVYITLLNELDEDVQFSNASYEAAIMENLALG 1319
Query: 118 LAVGRVHATDADEGQNAVVYY-----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ RV A D N + Y S F +D TG I +D EK Y
Sbjct: 1320 TEIVRVQAYSID-NINLITYRFDAHTSAQAKALFKIDTYTGVITVKGLVDREKGDFY 1375
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 86 ATVNIRVTDINDKNPEFQSLP---YEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
A + + + D+ND P F+ Y V EG G + V A D D+G N ++ YS+
Sbjct: 2267 AKLTVNILDVNDNTPRFKPFGITYYTEKVLEGATPGTTLIAVSAVDPDKGLNGLITYSLL 2326
Query: 142 EDIP----FVVDANTGDIRTNKALDYEK 165
+ +P + D++ G + N+ +DYE+
Sbjct: 2327 DLMPPGYVQLEDSSAGKVIANRTVDYEE 2354
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 67/156 (42%), Gaps = 22/156 (14%)
Query: 36 VKATDKDSGKFGLVEYRLL---------DNNTDAASYFN---LD------PATEHQGPIQ 77
+ A D D + +V Y+LL DN+T + + +D P E +
Sbjct: 1975 ILALDADLDVYAVVTYQLLGAQSGLFDIDNSTGVVTVRSGVVIDREAFSPPVLELLLLAE 2034
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVV 136
D G L+ TA + + + D ND P F + E G +V +V ATD D G N +
Sbjct: 2035 DIGLLNGTADLIVTILDDNDNWPTFSPAALTIHLLENCPPGFSVLQVTATDEDSGLNGEL 2094
Query: 137 YYSVPEDIP--FVVDANTGDIRT-NKALDYEKQQLY 169
Y + F++ TG IR N +D E+Q+ Y
Sbjct: 2095 VYRIEAGAQDRFLIHPVTGVIRVGNVTIDREEQESY 2130
Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 66/161 (40%), Gaps = 28/161 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G + V ATD D G G V Y + +F +D A IQ+
Sbjct: 139 VGTPIFIVNATDPDLGAGGSVLYSF----QPPSPFFAIDSARGIVTVIQELDYETTQAYQ 194
Query: 79 ----------EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
LS+ A + I +TD+ D +P F +LPY ++ E G V + A D
Sbjct: 195 LTVNATDQDKTRPLSTLANLAIIITDVQDMDPIFINLPYSTNIYEHSPPGTTVRVITAID 254
Query: 128 ADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEK 165
D+G+ + Y++ + F +D +G + N LD E
Sbjct: 255 QDKGRPRGIGYTIVSGNTNSIFALDYISGALTLNGLLDREN 295
Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 70 TEHQGPIQDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHAT 126
T +GP D ++ +RV DIND+ P F Y V + + G + +V A
Sbjct: 2802 TPPRGPAPDLDLVTDLTLQEVRVVLEDINDQPPRFTKAEYTAGVATDAKMGSELIQVLAL 2861
Query: 127 DADEGQNAVVYYSV 140
DAD G N++V+YS+
Sbjct: 2862 DADIGNNSLVFYSI 2875
>gi|326928556|ref|XP_003210443.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Meleagris
gallopavo]
Length = 4281
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE 142
S ATV + V D+ND P+F+++PY SV +G + G + +V ATD D G NAV+ YS E
Sbjct: 2059 SQATVKVYVEDVNDNPPQFENVPYYTSVQDGMEPGDVLFQVSATDKDIGNNAVITYSFAE 2118
Query: 143 DIP-FVVDANTGDIRTNKALDYEKQQLYLERVF 174
D F +D GDI K LDY Y RV
Sbjct: 2119 DYKYFRIDPYLGDISLKKPLDYHALNKYSLRVI 2151
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI 76
+ Y A + ++Q+ A+DKDSG+ +V Y++LD+ +D +FN+D +T
Sbjct: 2282 IIYTASVSENMPAHTPVVQIFASDKDSGRNKMVSYQILDDGSDTTKFFNIDTSTGQITTA 2341
Query: 77 Q-----------------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQD 116
Q D G LSS A V + VTDIND PEF L YE V E
Sbjct: 2342 QALDYEETQQFRMKVRAADHGMPPLSSDALVIVDVTDINDNPPEFSQLQYEAKVSEMATC 2401
Query: 117 GLAVGRVHATDADEGQNAVVYYSV 140
G V +V A D D G + Y +
Sbjct: 2402 GHIVIKVQALDPDSGDTTRLEYVI 2425
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 78/167 (46%), Gaps = 24/167 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL----------DNNTDAASYFNLD 67
Y A + E+G ++++ A D D G +G ++Y ++ DN + LD
Sbjct: 2492 MYEAELAENAEIGTKVIELLAIDPDGGPYGTIDYTIINKLADEKFSIDNKGHITTLQKLD 2551
Query: 68 PATEHQGPI------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAV 120
+ I +D GG + TV I +TD ND P+F++ Y S+ G V
Sbjct: 2552 RENSTERVIAIKVMAKDGGGKVAFCTVKIILTDENDNPPQFKASEYTLSIQSNVSKGSPV 2611
Query: 121 GRVHATDADEGQNAVVYYS------VPEDIPFVVDANTGDIRTNKAL 161
+V A DADEG NA V YS V EDI ++A TG ++ ++L
Sbjct: 2612 IQVLAYDADEGANADVVYSVDSVEDVSEDI-VEINAATGVVKVKESL 2657
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVP- 141
++ATV I + D N+ P F Y + E G +V V ATD DEG N V Y++
Sbjct: 443 TSATVVIDIIDCNNHAPSFSQSSYRGAFDENVPPGTSVLTVRATDEDEGDNGFVTYTIAN 502
Query: 142 -EDIPFVVDANTGDIRTNKALDYE-KQQLYLERVF 174
+ +PFV+D +G I T+K++DYE Q+ Y RV+
Sbjct: 503 QKSVPFVIDPYSGVISTSKSMDYELMQRWYHLRVW 537
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 80/178 (44%), Gaps = 40/178 (22%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSS----- 84
G ++QV ATDKD GK GL+ + + +F LDP++ G + G SS
Sbjct: 1472 GREILQVSATDKDKGK-GLIYTIHGSMDPKSTRFFQLDPSS---GALTTAEGFSSQPMPL 1527
Query: 85 -TATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGLAVG----RV 123
T TV +R V + N P+F S+ YE E D AVG +V
Sbjct: 1528 HTLTVMVRDQEVPIKRNFVRVIIHVENCNLHPPQFSSIHYE---AEALDSAAVGTEILQV 1584
Query: 124 HATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
A D D+G NA ++YS+ F +D ++G I + LD KQ ER LI K
Sbjct: 1585 RALDQDQGANAEIHYSLQAGNAEGFFSIDPHSGIITVAQKLDPSKQ----ERFTLIVK 1638
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG-LAVGRVHATDADEGQNAVVYYS 139
G S A V + V DIND P F + Y SV E V ++ A+D D G+N +V Y
Sbjct: 2258 GSFSEARVEVEVEDINDNPPVFSEIIYTASVSENMPAHTPVVQIFASDKDSGRNKMVSYQ 2317
Query: 140 VPEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ +D F +D +TG I T +ALDYE+ Q + +V
Sbjct: 2318 ILDDGSDTTKFFNIDTSTGQITTAQALDYEETQQFRMKV 2356
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVY 137
E L S +VNI+V DIND P F++ PY V E G V +V A D D G + V
Sbjct: 2782 ETELVSLVSVNIQVQDINDNKPVFEADPYRAFVMENMPSGTTVIQVTANDQDTGSDGQVT 2841
Query: 138 YSVPEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
YS+ + F +D TG I T K LD E Q+ Y R ++++
Sbjct: 2842 YSLEAESGNLRGLFTIDGETGWITTLKELDCETQETY--RFYVVA 2884
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVY 137
+G +T V I V DIND +PE + Y V E Q G + ++ ATD D G NA +
Sbjct: 2995 DGKFQATTEVEIFVLDINDNSPECGQIFYTGRVSEDAQPGHFILKISATDPDVGSNAQIT 3054
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
YS+ P F + A+TG++ T+ LD E++ Y
Sbjct: 3055 YSLHXPGAEEFRLGAHTGELTTSAPLDREQKPTY 3088
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 74/172 (43%), Gaps = 21/172 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---------NNTDAASYFN--LD 67
Y AM ++ +G ++ + A +D+ + ++Y +++ N+ A Y N LD
Sbjct: 3230 YVAMVKEDVAVGTEVLNLSALTRDNTENTEIKYEIVNGNDHGKFQLNSNTGALYINGSLD 3289
Query: 68 PATEHQGPIQDEG------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAV 120
H+ + EG LS V I +TDIND PEF PY + E G +
Sbjct: 3290 FEASHEYYLSIEGTRKGSASLSDVTMVVINITDINDHAPEFIQDPYFADIREDAAVGEII 3349
Query: 121 GRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
V A D D N + YS+ E P F + +G I K LD E+ Y
Sbjct: 3350 LTVSADDLDGTMNNQITYSIVEGNPQGHFAIQPKSGQISIAKHLDREEISSY 3401
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 77/187 (41%), Gaps = 35/187 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + G T++QV A D+D+G G V Y L + + F +D
Sbjct: 2810 YRAFVMENMPSGTTVIQVTANDQDTGSDGQVTYSLEAESGNLRGLFTIDGETGWITTLKE 2869
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
AT+H +Q LSS V + V+D ND P+F S Y+ SV E
Sbjct: 2870 LDCETQETYRFYVVATDHGRKVQ----LSSQTLVEVTVSDENDNAPQFTSDFYKGSVIEN 2925
Query: 114 GQDGLAVGRVHATDAD--EGQNAVVYYSVPEDI--PFVVDANTGD--IRTNKALDYEKQQ 167
+ G + + DAD E V Y D+ F VD G+ I + K LD E +
Sbjct: 2926 AEPGQIIVTLSTIDADISEQNRRVTCYITEGDVLGQFTVDQIEGEWTISSKKPLDREDTE 2985
Query: 168 LYLERVF 174
YL +V
Sbjct: 2986 KYLLKVM 2992
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 23/153 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL--------------DPATEH--QGP 75
+++Q+ A D DS G + + +L N NL + EH +
Sbjct: 1157 SVLQLDALDPDSSSEGKLTFHILTGNPQELFTINLVTGLISTTSRQLDREYKAEHILEVA 1216
Query: 76 IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE---GQDGLAVGRVHATDADE 130
+ D G L ST+ V I+V D ND P F + +PE + L V R+ A+D D+
Sbjct: 1217 VSDNGDPALKSTSRVVIQVLDANDNPPSFPHKLFMVQLPEREASETPLPVYRLIASDRDQ 1276
Query: 131 GQNAVVYYSVPEDIP--FVVDANTGDIRTNKAL 161
GQN+ V Y++ E+ F ++ TG + + KA
Sbjct: 1277 GQNSQVTYTIEEEEEGIFTINPTTGMVLSRKAF 1309
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 42/187 (22%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
S+ Y A A D +G ++QV+A D+D G + Y L N A +F++DP H G
Sbjct: 1564 SIHYEAEALDSAAVGTEILQVRALDQDQGANAEIHYSLQAGN--AEGFFSIDP---HSGI 1618
Query: 76 I--------------------QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
I +D+G L +ATV++R+ + P+F Y + E
Sbjct: 1619 ITVAQKLDPSKQERFTLIVKAEDQGFPQLKDSATVHVRIRPSDQTPPKFPEAEY---ITE 1675
Query: 114 GQDGLAVG----RVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQ 166
+ AVG +V A+ + V Y + + D F ++ +G I T K+LD+E+
Sbjct: 1676 ISESAAVGSPLIQVSASSL-----SPVSYEIKDGNGDGVFSMNYQSGLISTQKSLDFEQV 1730
Query: 167 QLYLERV 173
Y +V
Sbjct: 1731 SFYQLKV 1737
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 67/166 (40%), Gaps = 29/166 (17%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAA---------------------SYFNLDPAT 70
T+ + A D D+G G + Y + D N D+ S++ L+
Sbjct: 735 TIADLSAVDPDTGFNGKLVYVISDGNVDSCFTIDLELGLLQVLSPLDHERTSFYILNITV 794
Query: 71 EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
G Q SS + + V D ND P F Y ++PE G + ++ A DAD
Sbjct: 795 YDLGTPQK----SSWKLLAVNVLDTNDNTPRFPQGAYWVTIPENVATGTTIAQLKAEDAD 850
Query: 130 EGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
N V YS+ P D F ++ TG++ ALD E Y ++
Sbjct: 851 TDDNGRVKYSLLTPTD-KFAINGVTGEVTVTGALDRELWPCYALKI 895
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 71/163 (43%), Gaps = 26/163 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLL-------------DNNTDAASYFNLDPATEHQGPI 76
G T+ Q+KA D D+ G V+Y LL + A L P +
Sbjct: 838 GTTIAQLKAEDADTDDNGRVKYSLLTPTDKFAINGVTGEVTVTGALDRELWPCYALKIKA 897
Query: 77 QDEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRV----HATDA 128
+D+ L S + + + D+ND +P LP SV +D L VG V A D
Sbjct: 898 RDQPKTGYELFSITDLTVTLEDVNDNDP--HCLPALNSVKVPED-LPVGTVLLFLEAFDP 954
Query: 129 DEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D G V YS+ E++ F +D TG +R K LDYEK+ Y
Sbjct: 955 DAGSGGEVRYSLVNDEEMMFHIDKLTGALRLEKELDYEKKDSY 997
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 64/167 (38%), Gaps = 27/167 (16%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD--------- 67
+FY + + G ++++ ATD D G + Y L + A F L
Sbjct: 3021 IFYTGRVSEDAQPGHFILKISATDPDVGSNAQITYSL---HXPGAEEFRLGAHTGELTTS 3077
Query: 68 -PATEHQGPI-------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP---EGQD 116
P Q P D GG S A + + + D ND P F P +V
Sbjct: 3078 APLDREQKPTYHLVAKATDGGGRSCQADIMLTIEDTNDNAPRF--FPSHCAVAVFDNTTT 3135
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKAL 161
+ V A D DEG NA V YS+ + F ++ TG IR K L
Sbjct: 3136 KTPIAVVSARDLDEGLNAEVVYSLSDSANGHFSIEETTGVIRLEKPL 3182
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 75/183 (40%), Gaps = 24/183 (13%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN----------TDAASYFN- 65
L Y A + G +++V+A D DSG +EY +L N + S FN
Sbjct: 2389 LQYEAKVSEMATCGHIVIKVQALDPDSGDTTRLEYVILSGNDHRHFTINSTSGIISMFNR 2448
Query: 66 ----LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAV 120
L+ + + D G ST V I T+ N +P FQ YE + E + G V
Sbjct: 2449 CKKDLESSYSLRVSASD-GVFKSTVPVYINTTNANKYSPSFQQNMYEAELAENAEIGTKV 2507
Query: 121 GRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
+ A D D G + Y++ D F +D N G I T + LD E ERV I
Sbjct: 2508 IELLAIDPDGGPYGTIDYTIINKLADEKFSID-NKGHITTLQKLDRENST---ERVIAIK 2563
Query: 178 KFA 180
A
Sbjct: 2564 VMA 2566
Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 75/177 (42%), Gaps = 35/177 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------ 82
+G L+ ++A D D+G G V Y L++ D F++D T G ++ E L
Sbjct: 942 VGTVLLFLEAFDPDAGSGGEVRYSLVN---DEEMMFHIDKLT---GALRLEKELDYEKKD 995
Query: 83 -----------------SSTATVNIRVTDINDK--NPEFQSLPYEFSVPEGQ-DGLAVGR 122
SS + + V D+N+ P F S ++ V E +G +V
Sbjct: 996 SYNLTVQVSDSGKPVSRSSLCHLEVNVLDVNENLYPPRFASFVFKGWVQENSPEGTSVMM 1055
Query: 123 VHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
V A D D+G++ V Y + E F ++ +TG IRT LD E Y V +
Sbjct: 1056 VAAKDIDKGKDGEVQYFLREGTGLSVFSIEKDTGTIRTIGPLDREGTSHYWLTVLAL 1112
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 28/183 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EH 72
S + ++ G ++M V A D D GK G V+Y L + S F+++ T
Sbjct: 1036 SFVFKGWVQENSPEGTSVMMVAAKDIDKGKDGEVQYFLREGT--GLSVFSIEKDTGTIRT 1093
Query: 73 QGPIQDEGG----------------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ- 115
GP+ EG LSS + I VTD ND P+ Y SV E
Sbjct: 1094 IGPLDREGTSHYWLTVLALDLGTVPLSSATEIYIEVTDTNDNPPQMSRPVYYASVMENSP 1153
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIR-TNKALDYEKQQLYL 170
+V ++ A D D + + + P+++ F ++ TG I T++ LD E + ++
Sbjct: 1154 PNTSVLQLDALDPDSSSEGKLTFHILTGNPQEL-FTINLVTGLISTTSRQLDREYKAEHI 1212
Query: 171 ERV 173
V
Sbjct: 1213 LEV 1215
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 63/165 (38%), Gaps = 24/165 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA---TEHQGP 75
Y +D E G L QV ATDKD G ++ Y ++ YF +DP + P
Sbjct: 2082 YYTSVQDGMEPGDVLFQVSATDKDIGNNAVITYSFAED----YKYFRIDPYLGDISLKKP 2137
Query: 76 I--------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVG 121
+ +D G A + ++ N NP FQSL Y VPE
Sbjct: 2138 LDYHALNKYSLRVIAKDNGEPPLLAEEEVVISVRNKSNPLFQSLYYRVKVPENIPPYTSI 2197
Query: 122 RVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYE 164
+ EG ++Y + ED F D TG + LDYE
Sbjct: 2198 LHIQARSPEGLR-LIYNILEEDSLKLFSTDFKTGVLTVTGQLDYE 2241
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV--PE 142
A V I + D ND P F Y+ S+ E V + ATDAD GQNA YY++
Sbjct: 135 AKVLIHILDRNDLKPLFSPPSYKVSIREDTPLKTVVSTLSATDADAGQNAEFYYALNTKS 194
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKF 179
D+ F + TG + T L+ + + +V + +
Sbjct: 195 DL-FTIHPTTGAVVTTGRLNSTHRGRHHLQVLAVDRM 230
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 53/127 (41%), Gaps = 28/127 (22%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE----------HQGPI-------QDEG 80
ATD D L+ Y +L+ +A YF +DP+T P+ +D G
Sbjct: 1796 ATDADQDSNALLVYEILE--PEALKYFTVDPSTGTLTSRADIDYELTPVFHFSVHARDSG 1853
Query: 81 G----LSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEGQNAV 135
S A V I V D+ND P F YE SV G+ + V A DAD +
Sbjct: 1854 NPSLFASKPAKVTIHVKDVNDSPPVFAKDTYELSVLLPAHPGMELLSVQAKDAD----SE 1909
Query: 136 VYYSVPE 142
V YS+ E
Sbjct: 1910 VTYSIVE 1916
Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD---GLAVGRVHATDADEGQNAVVYY 138
LSS+A VNI+VT+ + P +LP E + ++ G +G++HATD D + +VY
Sbjct: 3520 LSSSAFVNIQVTEQSQYAP--SALPLEIFITTNEEAFRGGVLGKIHATDRDP-HDTLVYT 3576
Query: 139 ---SVPEDIPFVVDANTGDIRTNKALDY 163
VP++ F V A G I L +
Sbjct: 3577 LVAEVPQEGRFSVGAADGKIIAGNKLPH 3604
Score = 35.4 bits (80), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 124 HATDADEGQNAVVYYSV--PEDIP-FVVDANTGDIRTNKALDYE 164
HATDAD+ NA++ Y + PE + F VD +TG + + +DYE
Sbjct: 1795 HATDADQDSNALLVYEILEPEALKYFTVDPSTGTLTSRADIDYE 1838
>gi|149017275|gb|EDL76326.1| rCG49535 [Rattus norvegicus]
Length = 649
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 75/147 (51%), Gaps = 19/147 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGG---LSSTATVN 89
+ V+ +D+ S LV + LD +A L + +GG L+ T +
Sbjct: 45 FLDVQTSDELSQSLFLVLGKSLDREENAEVKLLL---------VATDGGKPELTGTVQIL 95
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDIP--- 145
I+V D+ND P F Y+ + E +G V +++A+DADEG N+ + YS+ D+
Sbjct: 96 IKVLDVNDNEPTFPQSVYKVPLLENTANGTLVIKLNASDADEGANSEIVYSLSSDVSSTT 155
Query: 146 ---FVVDANTGDIRTNKALDYEKQQLY 169
F +DAN+G+IRT LDYE++ Y
Sbjct: 156 RTKFQIDANSGEIRTTGELDYEEKTSY 182
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 72/180 (40%), Gaps = 38/180 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------------NTDAASYFN 65
Y ++ + G + V A D D+ + LV Y L++ + ++ F
Sbjct: 326 YTVFVKENNPPGAHIFTVSAVDADAQENALVFYSLVERRMGERLLSSYVSVHAESGKVFA 385
Query: 66 LDPA-------TEHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPY--------- 107
L P + Q +D G L S T+ + V D ND P LP+
Sbjct: 386 LQPLDHEELELLQFQVSARDAGVPALGSNVTLQVFVLDENDNAPML--LPHGAVGVGGSV 443
Query: 108 -EFSVPEGQDGLAVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALD 162
E G V +VHA DAD G NA + Y +V IPF V TG+I T +ALD
Sbjct: 444 SELVPRSVGSGHVVTKVHAVDADSGYNAWLSYELQPTVGTRIPFRVGLYTGEISTTRALD 503
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 28/167 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVE--------YRLLDNNTDAASYFNLDPATEHQGPIQ--- 77
LG + + +D+DSG G V ++L+ + S LD A + + +
Sbjct: 231 LGAVIALISVSDRDSGINGQVTCSLSPHLPFKLVSTFKNYYSLV-LDSALDRETTAEYKV 289
Query: 78 ----DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
+GG L +TAT+++ V D+ND P F Y V E G + V A DAD
Sbjct: 290 MVTARDGGSPSLQATATISVEVADVNDNAPLFAQPEYTVFVKENNPPGAHIFTVSAVDAD 349
Query: 130 EGQNAVVYYSVPED-------IPFV-VDANTGDIRTNKALDYEKQQL 168
+NA+V+YS+ E +V V A +G + + LD+E+ +L
Sbjct: 350 AQENALVFYSLVERRMGERLLSSYVSVHAESGKVFALQPLDHEELEL 396
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 27/141 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLL-DNNTDAASYFNLDPAT-----------------E 71
G ++++ A+D D G + Y L D ++ + F +D + E
Sbjct: 124 GTLVIKLNASDADEGANSEIVYSLSSDVSSTTRTKFQIDANSGEIRTTGELDYEEKTSYE 183
Query: 72 HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQ----SLPYEFSVPEGQDGLAVGRVHA 125
Q D+G +S +++++ DIND PE SLP + + P G + +
Sbjct: 184 IQIIASDKGTPSMSGHCKISVKLMDINDNTPEVSITSLSLPVQENAPLGA---VIALISV 240
Query: 126 TDADEGQNAVVYYSVPEDIPF 146
+D D G N V S+ +PF
Sbjct: 241 SDRDSGINGQVTCSLSPHLPF 261
>gi|345776762|ref|XP_538324.3| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Canis
lupus familiaris]
Length = 3106
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 86/180 (47%), Gaps = 28/180 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---------------------NN 57
Y R+ E+G ++ ++ATD D+ + YRLL+ +
Sbjct: 462 YRERVRENLEVGYEVLTIRATDGDAPSNANMRYRLLEGAEGVFEIDARSGVVRTRAPVDR 521
Query: 58 TDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QD 116
+AA+Y L A + QG ++ G LS+TATV+I V D ND P+F Y VPE
Sbjct: 522 EEAAAYQLLVEAND-QG--RNPGPLSATATVHIVVEDENDNYPQFGEKRYVVQVPEDVAV 578
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V RV ATD D+GQNA ++YS+ F + + +G + LD+E + Y R+
Sbjct: 579 NTPVLRVRATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLDFEAVREYTLRI 638
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 76/159 (47%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQ-- 73
+G +++ ++A D+D+ ++ Y+L NT + LD E Q
Sbjct: 806 VGSSVLTLRARDRDANS--VITYQLTGGNTRNRFALSSQSGGGLITLALPLDYKQERQYV 863
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G S TA V I VTD N P FQS Y SV E + G ++ + ATD D G
Sbjct: 864 LAVTASDGTRSHTAQVFINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATISATDEDTG 923
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + +P F +D +TG I T LDYE Q Y
Sbjct: 924 ENARITYVLEDPVPQFRIDPDTGTIYTMTELDYEDQAAY 962
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 33/181 (18%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY------------------------RL 53
FY + +++QV ATD+DSG G + Y R
Sbjct: 1000 FYQGSVFEDAPPSTSVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRR 1059
Query: 54 LDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
LD A +NL +G LS++ + + V DIND P F+ E V E
Sbjct: 1060 LDRENVAV--YNLRALAVDRG---SPAPLSASVEIQVSVLDINDNPPVFERDELELFVEE 1114
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLY 169
G V ++ A D DEG NA + Y + E ++P F +D +GD+R LD+E ++ Y
Sbjct: 1115 NSPVGSVVAKIRANDPDEGPNAQIMYQIVEGNVPEVFQLDLLSGDLRALAELDFEVRREY 1174
Query: 170 L 170
+
Sbjct: 1175 V 1175
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 39/176 (22%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQGPIQDE 79
+++V+ATD+D G+ + Y ++ N Y + + E+ I+ +
Sbjct: 582 VLRVRATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLDFEAVREYTLRIKAQ 641
Query: 80 GG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
G ++S+ V ++V D+ND P F S P++ +V E G +V + A DAD G+N
Sbjct: 642 DGGRPPLINSSGLVLVQVLDVNDNAPIFVSSPFQAAVLENVPLGHSVLHIQAVDADAGEN 701
Query: 134 AVVYYSV--------------------PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A + Y + P D PF + ++G I LD E+ + Y
Sbjct: 702 ARLRYRLVDTASSSLGSGGPGTEDPGSPPDFPFQIHNSSGWITVCAELDREEIEHY 757
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 37/170 (21%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPAT---------------- 70
G +++++A D D G+ G + Y+ L D ++ YF +D AT
Sbjct: 365 GTAVIELRAHDPDEGEAGRLSYQMEALFDERSNG--YFLIDAATGAVSTARALDRETKDT 422
Query: 71 --------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
+H P + S+ + + V+D ND +P F+ Y V E + G V
Sbjct: 423 HVLKVSALDHGWPRR-----SAATYLTVTVSDTNDHSPAFEQSEYRERVRENLEVGYEVL 477
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+ ATD D NA + Y + E F +DA +G +RT +D E+ Y
Sbjct: 478 TIRATDGDAPSNANMRYRLLEGAEGVFEIDARSGVVRTRAPVDREEAAAY 527
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 28/187 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y + +G ++ + ATD+D+G+ + Y L D F +DP T
Sbjct: 895 SSHYTVSVSEDRPVGTSIATISATDEDTGENARITYVL----EDPVPQFRIDPDTGTIYT 950
Query: 71 ------EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E Q +D G S T ++ I + D ND P F Y+ SV E
Sbjct: 951 MTELDYEDQAAYTLAITARDNGIPQKSDTTSLEILILDANDNAPRFLRDFYQGSVFEDAP 1010
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
+V +V ATD D G N + Y+ D F ++ +G IRT + LD E +Y
Sbjct: 1011 PSTSVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRENVAVYNL 1070
Query: 172 RVFLISK 178
R + +
Sbjct: 1071 RALAVDR 1077
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 100 PEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP------EDIPFVVDANT 152
P+F Y+ SVPE + G AV + A D DEG+ + Y + + F++DA T
Sbjct: 347 PQFPLPSYQVSVPENEPAGTAVIELRAHDPDEGEAGRLSYQMEALFDERSNGYFLIDAAT 406
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G + T +ALD E + ++ +V
Sbjct: 407 GAVSTARALDRETKDTHVLKV 427
Score = 39.3 bits (90), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 42/182 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL---DPATEHQGPIQ-------- 77
LG +++ ++A D D+G+ + YRL+D + + DP + P Q
Sbjct: 684 LGHSVLHIQAVDADAGENARLRYRLVDTASSSLGSGGPGTEDPGSPPDFPFQIHNSSGWI 743
Query: 78 ---------------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
D G +SS+A+V+I V D+ND +P F YE + E
Sbjct: 744 TVCAELDREEIEHYSFGVEAVDHGSPPMSSSASVSITVLDVNDNDPVFTQPVYELRLNED 803
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQL 168
G +V + A D D N+V+ Y + + G I LDY++++
Sbjct: 804 AAVGSSVLTLRARDRDA--NSVITYQLTGGNTRNRFALSSQSGGGLITLALPLDYKQERQ 861
Query: 169 YL 170
Y+
Sbjct: 862 YV 863
>gi|444732649|gb|ELW72931.1| Protocadherin-11 X-linked [Tupaia chinensis]
Length = 907
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 77/162 (47%), Gaps = 26/162 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G L ++ ATD DSG+ V Y L DA S FNLD T E Q
Sbjct: 482 GAQLTKISATDADSGRNAEVSYLL---GIDAPSEFNLDRRTGILTAVKKLDREKQEKYSF 538
Query: 76 ---IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--QDGLAVGRVHATDA 128
+D G L + ATV + V D ND +P F Y F VPE + G VG + TD
Sbjct: 539 TVLAKDNGIPPLITNATVFLTVLDQNDNSPVFTHNEYNFYVPENLPRHG-TVGLITVTDP 597
Query: 129 DEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLY 169
D G+N+ V S+ + + F +D TG IR N + D EKQ+ Y
Sbjct: 598 DYGENSAVTLSILDVNDDFTIDPQTGVIRPNISFDREKQESY 639
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
L+ +A + ++V D ND P F SVPE G + ++ ATDAD G+NA V Y +
Sbjct: 446 LNQSAMLLVKVKDENDNAPVFTQPSISLSVPENNFPGAQLTKISATDADSGRNAEVSYLL 505
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
D P F +D TG + K LD EKQ+ Y
Sbjct: 506 GIDAPSEFNLDRRTGILTAVKKLDREKQEKY 536
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 10/98 (10%)
Query: 78 DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
++GG SSTA + + V D ND +P F E S+PE G +V ++HATDAD G+N
Sbjct: 222 EDGGFPQRSSTAILQVSVADTNDNHPVFTEKEIEVSIPENAPVGTSVTQLHATDADIGEN 281
Query: 134 AVVYYSVPEDIP------FVVDANTGDIRTNKALDYEK 165
A +++ + F ++ TG I + LD E+
Sbjct: 282 AKIHFYFSNLVSNIAKRLFHLNTTTGLITIKEPLDREE 319
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 64/150 (42%), Gaps = 30/150 (20%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP---------------I 76
T+ + TD D G+ V +LD N D F +DP T P +
Sbjct: 588 TVGLITVTDPDYGENSAVTLSILDVNDD----FTIDPQTGVIRPNISFDREKQESYTFYV 643
Query: 77 QDEGG----LSSTATVNIRVTDINDKNPEFQSLP----YEFSVPEGQDGLAVGRVHATDA 128
+ E G SSTA V I V D+ND P F P +E +P G V +V A D
Sbjct: 644 KAEDGGRVSRSSTAKVTINVVDVNDNKPVFVVPPSNYSFELVLPSTNPGTVVFQVVAVDN 703
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDI 155
D G NA + YS+ + F +D TG+I
Sbjct: 704 DTGINAELRYSIVGGNTNGLFTIDQTTGNI 733
>gi|444713164|gb|ELW54072.1| Protocadherin alpha-7 [Tupaia chinensis]
Length = 1009
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 71/147 (48%), Gaps = 13/147 (8%)
Query: 34 MQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVT 93
+ VK D+ + GL+ R LD D + L AT+ P L+ T + I V
Sbjct: 166 LDVKTNSDDNKQIGLLLKRPLDRE-DTPEHNLLLTATDGGKP-----ELTGTVQLLITVL 219
Query: 94 DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------F 146
D+ND P F+ YE + E D G V R++A+D DEG N + YS +P F
Sbjct: 220 DVNDNAPSFERSEYEVRIFENADNGTTVIRLNASDLDEGANGAISYSFSSLVPPTVASLF 279
Query: 147 VVDANTGDIRTNKALDYEKQQLYLERV 173
+D NTG+I LD+E+ +Y R+
Sbjct: 280 SIDPNTGEISIQGNLDHEQVNVYKIRI 306
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 72/174 (41%), Gaps = 38/174 (21%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQ----------GPI----------- 76
A D D G+ L+ Y L N YF+LD T HQ P+
Sbjct: 567 AWDADIGENALLTYSLNPNE-----YFSLDVPTNHQQVKPLGLVLRKPLDREETPELLLL 621
Query: 77 ---QDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
D G T TV + +T D ND P F Y +PE G V ++ATD DE
Sbjct: 622 LTATDAGKPELTGTVELLITVLDANDNAPVFDRTLYTVQLPENVSVGTVVIDLNATDLDE 681
Query: 131 GQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N + YS D F +DA +G+I +D+E+ +++ RV I K
Sbjct: 682 GLNGDITYSFSSDASPDINSKFHIDATSGEITVMGLIDFEESKVHKIRVEAIDK 735
Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 55/141 (39%), Gaps = 27/141 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPATEHQGPIQDEGGL------ 82
G T++++ A+D D G G + Y AS F++DP T G I +G L
Sbjct: 244 GTTVIRLNASDLDEGANGAISYSFSSLVPPTVASLFSIDPNT---GEISIQGNLDHEQVN 300
Query: 83 ----------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHA 125
+ TV ++V D ND P+ V E Q G + +
Sbjct: 301 VYKIRIDATDKGHPPMAGHCTVLVKVLDKNDNAPQIALTSLSLPVQEDAQIGTVIALISV 360
Query: 126 TDADEGQNAVVYYSVPEDIPF 146
+D D G N V SV IPF
Sbjct: 361 SDRDSGANGQVTCSVTPKIPF 381
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 60/153 (39%), Gaps = 21/153 (13%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL-DNNTDAASYFNLDPATE-- 71
D Y + +G ++ + ATD D G G + Y D + D S F++D +
Sbjct: 653 DRTLYTVQLPENVSVGTVVIDLNATDLDEGLNGDITYSFSSDASPDINSKFHIDATSGEI 712
Query: 72 -------------HQGPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
H+ ++ D+G L+ TV ++V D ND P+ + E
Sbjct: 713 TVMGLIDFEESKVHKIRVEAIDKGFPPLAGHCTVLVKVVDTNDNAPQLTVTSLSLPISEN 772
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIPF 146
Q G + + D D G N V SV IPF
Sbjct: 773 AQPGTVITLISVFDRDSGANGQVTCSVTPKIPF 805
>gi|62510878|sp|Q5DRC6.1|PCDB8_PANTR RecName: Full=Protocadherin beta-8; Short=PCDH-beta-8; Flags:
Precursor
Length = 801
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY + + +++V ATD D+G G + Y L + + + F +D T
Sbjct: 247 FYRVQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRLKK 306
Query: 71 ----------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
E +D GG S TV I+V D+ND PE + +PE V
Sbjct: 307 QLDFEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPENAPETVV 366
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
+D D G+N + S+ ED+PF++ ++ G+ + T LD E + Y
Sbjct: 367 ALFSVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEY 418
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
S TA V I V D+ND PEF+ Y + E V +V ATD D G N + YS+
Sbjct: 224 SGTAQVYIEVVDVNDNAPEFEQPFYRVQISEDSPISFLVVKVSATDVDTGVNGEISYSLF 283
Query: 141 --PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
++I F VD TG+IR K LD+EK Q Y
Sbjct: 284 QASDEISKTFKVDFLTGEIRLKKQLDFEKFQSY 316
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 78/187 (41%), Gaps = 35/187 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL-------------DNNTDAASYFN 65
Y R+ + + + V ATD+DSG V Y LL NTD F
Sbjct: 457 YTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQNPHLPLASLVSINTDNGHLFA 516
Query: 66 LDP-------ATEHQGPIQDEG--GLSSTATVNIRVTDINDKNP------EFQSLPYEFS 110
L A E + D G LSS A V + V D ND +P + S P
Sbjct: 517 LRSLDYEALQAFEFRVGASDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNSSAPCTEL 576
Query: 111 VPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL---DY 163
VP + G V +V A D D GQNA + Y + E F V A+ G++RT + L D
Sbjct: 577 VPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDA 636
Query: 164 EKQQLYL 170
KQ+L +
Sbjct: 637 AKQRLVV 643
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS 139
GL++ + + V+D+ND P F Y V E L +G V ATD D G NA V YS
Sbjct: 431 GLTTHLNMTVLVSDVNDNAPAFTQASYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS 490
Query: 140 V--PED--IPFV----VDANTGDIRTNKALDYEKQQLYLERV 173
+ P++ +P ++ + G + ++LDYE Q + RV
Sbjct: 491 LLPPQNPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRV 532
>gi|297261317|ref|XP_001111116.2| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Macaca
mulatta]
Length = 3002
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 88/186 (47%), Gaps = 32/186 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA------------ASYFNL 66
Y R+ E+G ++ ++A+D+DS + YR+L D + +
Sbjct: 445 YRERVRENLEVGYEVLTIRASDRDSPVNANLRYRVLGGAWDVFQLNESSGVVSTRAVLDR 504
Query: 67 DPATEHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-- 118
+ A E+Q ++ + G LS+TATV I V D ND P+F Y VPE GL
Sbjct: 505 EEAAEYQLLVEANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNYVVQVPE-DVGLNT 563
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
AV RV ATD D+GQNA ++YS ++ N+ + + + LD E +F+ S
Sbjct: 564 AVLRVQATDRDQGQNAAIHYS-------ILIINSSGVVSVQVLDVNDN----EPIFVSSP 612
Query: 179 FATSYL 184
F + L
Sbjct: 613 FQATVL 618
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQ-- 73
+G +++ ++A D+D+ ++ Y+L NT + LD E Q
Sbjct: 745 VGSSVLTLQARDRDANS--VITYQLTGGNTRNRFALSSQRGGGLITLALPLDYKQEQQYV 802
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G S TA V I VTD N P FQS Y SV E + G ++ + A D D G
Sbjct: 803 LAVTASDGTRSHTAHVLINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATLSANDEDTG 862
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + +P F +D ++G + T LDYE Q Y
Sbjct: 863 ENARITYVIQDPVPQFRIDPDSGTMYTMMELDYENQVAY 901
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 73/167 (43%), Gaps = 33/167 (19%)
Query: 32 TLMQVKATDKDSGKFGLVEY------------------------RLLDNNTDAASYFNLD 67
+++QV ATD+DSG G + Y R LD + A Y
Sbjct: 953 SILQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRE-NVAVYNLWA 1011
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
A + P LS++ + + + DIND P F+ E V E G V ++ A
Sbjct: 1012 LAVDRGSPTP----LSASVEIQVTILDINDNAPMFEKDELELFVEENNPVGSVVAKIRAN 1067
Query: 127 DADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
D DEG NA + Y + E D+ F +D GD+R LD+E ++ Y+
Sbjct: 1068 DPDEGPNAQIMYQIVEGDMRHFFQLDLLNGDLRAMVELDFEVRREYV 1114
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 47/162 (29%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATV 88
L +++V+ATD+D G+ + Y +L N S+ V
Sbjct: 561 LNTAVLRVQATDRDQGQNAAIHYSILIIN--------------------------SSGVV 594
Query: 89 NIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE----- 142
+++V D+ND P F S P++ +V E G V + A DAD G+NA ++Y + +
Sbjct: 595 SVQVLDVNDNEPIFVSSPFQATVLENVPLGYPVVHIQAVDADSGENARLHYRLVDTASAF 654
Query: 143 ---------------DIPFVVDANTGDIRTNKALDYEKQQLY 169
D PF + ++G I LD E+ + Y
Sbjct: 655 LGGGSAGPKNPAPTPDFPFQIHNSSGWITVCAELDREEVEHY 696
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y + +G ++ + A D+D+G+ + Y + D F +DP +
Sbjct: 834 SSHYTVSVSEDRPVGTSIATLSANDEDTGENARITYVI----QDPVPQFRIDPDSGTMYT 889
Query: 71 ------EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E+Q QD G S T T+ I + D ND P+F Y+ S+ E
Sbjct: 890 MMELDYENQVAYTLTIMAQDNGIPQKSDTTTLEILILDANDNAPQFLWDFYQGSIFEDAP 949
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ +V ATD D G N + Y+ D F ++ +G IRT + LD E +Y
Sbjct: 950 PSTSILQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRENVAVY 1007
>gi|345548553|gb|AEO12553.1| Lefftyrin, partial [Oscarella carmela]
Length = 14757
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 74/168 (44%), Gaps = 20/168 (11%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEG-------- 80
+G ++ V A+D DSG +V Y ++ N+D A N G D
Sbjct: 1327 IGTSVFAVVASDDDSGLNAIVSYSIVAGNSDFAFVINSTSGELTVGNSLDREKTSSYRLT 1386
Query: 81 ----------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
G SS+A V + + D+ND P+ + YE SV E G +V V ATD D
Sbjct: 1387 VTATNSFATFGRSSSADVIVHILDVNDNTPQLEKANYEASVVENSPTGTSVLTVKATDDD 1446
Query: 130 EGQNAVVYYSV-PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
G N V YS+ P F +D +G + +LD EKQ +Y V +
Sbjct: 1447 IGSNGAVTYSLSPSSSLFNIDNTSGVLEVTGSLDREKQSVYSLNVIAV 1494
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 75/178 (42%), Gaps = 22/178 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG---- 74
+ R+ + ++ V A D DSG + Y ++ + N G
Sbjct: 4981 FTVKVRENTPVSTSVFTVSAEDADSGINADLAYSIVAGAEGGQLFINSSSGILRVGGAGL 5040
Query: 75 ------------PIQDEGGLSSTA--TVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
++D G S TA TVN+ V D+ND+ P F + Y F PE
Sbjct: 5041 DRESNPHFVLSLEVRDRGSPSLTAATTVNVTVEDVNDEAPVFTEIQYVFHAPENVSSNSI 5100
Query: 120 VGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
VG V ATD D G NA V YS+ E + F V+ G+I TN+ALD E Y +V
Sbjct: 5101 VGLVSATDNDAGTNAFVKYSITEGNANGTFSVNPFLGEIETNRALDRENVAAYSLKVL 5158
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 84/173 (48%), Gaps = 24/173 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--------------TDAASY- 63
Y A + +G +++QVKATD D+G LV Y ++ N T AAS
Sbjct: 1004 YTATVSESFSVGTSVVQVKATDLDTGLNALVSYSFVNGNVGQAFGINSSNGLVTVAASLD 1063
Query: 64 FNLDPATEHQGPIQDEGG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
F PA + I+ G LSST T+N+ VTD ND P F + Y + E G
Sbjct: 1064 FETRPA--YSLTIEAVDGNSVKPLSSTVTLNVAVTDSNDHAPSFSANVYRAVLNESAGVG 1121
Query: 118 LAVGRVHATDADEGQNAVVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ++ A+D D G N + +S V DI + G ++T + LDYE++Q Y
Sbjct: 1122 FSVLQLTASDPDVGTNGQIAFSLVSGDIGDFNLSAGGLLKTARNLDYERRQTY 1174
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 80/175 (45%), Gaps = 26/175 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDA---ASYFN 65
Y A A + LG +++ V ATD D G + Y + ++N T A+ +
Sbjct: 8362 IYNASASEDAGLGNSIVTVSATDGDRGVNAKILYAITSGDQGSFDVNNETGVITLAAALD 8421
Query: 66 LDPATEHQ------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE----GQ 115
+ +Q P L +ATVNI V D+ND P F + Y + + E G+
Sbjct: 8422 FERVENYQLVITARNPSSSSSILPRSATVNIAVLDVNDNAPIFDQMFYRWEILENVTIGK 8481
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLY 169
G + V ATDAD G N+++ YS+ + F +D GD+ T K LD E Q Y
Sbjct: 8482 AGFS---VQATDADSGINSLIRYSLTDASSTFTIDHRFGDLSTLKTLDRETQASY 8533
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 81/182 (44%), Gaps = 28/182 (15%)
Query: 10 LEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA 69
+E + D LF+ + +G L ++KA D+DSGK G + + + N F+LD
Sbjct: 8253 IETSQDVLFF----PENSPVGPVLAEIKAQDRDSGKNGKLNFAITSGNN--GGIFSLDSL 8306
Query: 70 TEHQG-----------------PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFS 110
+ + D G LSST + I VTDI+D P F Y S
Sbjct: 8307 SGQLSIVRSLDRETKKNYDLTVAVSDSGVPSLSSTTVLKINVTDIDDNIPVFNQTIYNAS 8366
Query: 111 VPEGQD-GLAVGRVHATDADEGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQ 167
E G ++ V ATD D G NA + Y++ + F V+ TG I ALD+E+ +
Sbjct: 8367 ASEDAGLGNSIVTVSATDGDRGVNAKILYAITSGDQGSFDVNNETGVITLAAALDFERVE 8426
Query: 168 LY 169
Y
Sbjct: 8427 NY 8428
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 75/162 (46%), Gaps = 21/162 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLD---------NNTDAASYFN------LDPATEHQ 73
LG++++ + A+D D G G ++Y ++ N + N + P
Sbjct: 4781 LGLSVLNLTASDPDDGSLGELKYEIVKIHPKGDFAINEQSGQIFVNGSLDREMSPRYTLT 4840
Query: 74 GPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
+ D G LS+ A VNI + D+ND +P F++L Y+FS+ E G +G V ATD D
Sbjct: 4841 VKVNDFGFPSLSAEAQVNITIADVNDNSPVFETLLYDFSLYENVSVGSTLGTVKATDDDI 4900
Query: 131 GQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLY 169
G N + YS+ F V G I +A+DYE Y
Sbjct: 4901 GANGDILYSIESGNTRDSFDVGRRNGHITLQRAVDYESVTNY 4942
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 87/177 (49%), Gaps = 23/177 (12%)
Query: 20 GAMARDKHE-LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNT-----DAASY 63
G++ +++E +G +L + ATD+D+G+ G V Y L +D+ T +A
Sbjct: 6417 GSLFLNENEPVGSSLAFITATDEDNGRSGQVTYFLKATSDSVGFEIDHQTGELLSNATFD 6476
Query: 64 FNLDPATEHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
+ L P + + G LSS+ TVN+ + D+ND +P F++ + V E +V
Sbjct: 6477 YELSPRLHSLTVVASDSGAPPLSSSVTVNVSIVDLNDNSPRFETNAFTVDVKESVSLTSV 6536
Query: 121 -GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V ATD+D G N V Y + E+ V+ +TG + ++LD E+ Y R+
Sbjct: 6537 IASVKATDSDSGLNGDVVYEIVGGNEESVVAVNRSTGALTVVRSLDRERTDQYRFRI 6593
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 81/176 (46%), Gaps = 25/176 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDN-----------NTDAASYFNLDP-----ATEHQ 73
G + V A+D DSG +++Y +L+ N L+P +++
Sbjct: 6109 GSQITTVSASDADSGDNAVLQYSVLETVGSVGYGKFGVNASTGQVTLLEPLDRENRSQYS 6168
Query: 74 GPIQ-DEGGLSSTA---TVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
IQ +GGL S + T+ + VTD+ND+ P F Y S+ E G V V A DA
Sbjct: 6169 LKIQASDGGLPSLSGEITIFVTVTDVNDEAPLFTEASYLASIAENASVGDLVFTVRANDA 6228
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFAT 181
DEG N +V YS+ D F VD + G I K LD E Y+ + L S FA+
Sbjct: 6229 DEGTNGLVSYSIRSGNRDGQFTVDHSNGQIAVLKPLDREAVNSYVLTI-LASDFAS 6283
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 74/166 (44%), Gaps = 33/166 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------- 82
G ++ + ATD DSG G V YRL+ + D +++P T G + +G L
Sbjct: 2560 GTAILGLTATDLDSGLNGQVRYRLVPPSND----LDVNPGT---GVLSTKGTLDRESTSQ 2612
Query: 83 ---------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
SS ++V I V D+ND P F Y ++ E G V V A
Sbjct: 2613 YDLIVEAFDLGVPSRSSNSSVRIMVEDVNDSPPTFSQFLYVATISEAAPAGADVQIVEAI 2672
Query: 127 DADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLY 169
D D G NAV YS+ + F ++ +G I+ N+ +D E + +Y
Sbjct: 2673 DGDAGSNAVFLYSLRVSLDSSAFRINGRSGQIQLNRKVDRESKDVY 2718
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 77/157 (49%), Gaps = 21/157 (13%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYR----------LLDNNTDA---ASYFNLDPATEHQGP 75
+G + V ATD+D G G+V Y L+D+ T A A + + E+Q
Sbjct: 6322 VGTLVALVNATDRDLGLNGVVAYMIETGDPDGRFLIDSVTGALTVAQTLDRESKAEYQLE 6381
Query: 76 I--QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
+ +D+G L STA++ + V D+ND P F P + E + G ++ + ATD D
Sbjct: 6382 VLAEDQGIPSLQSTASITVNVLDVNDNAPRFSVPPGSLFLNENEPVGSSLAFITATDEDN 6441
Query: 131 GQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYE 164
G++ V Y + + + F +D TG++ +N DYE
Sbjct: 6442 GRSGQVTYFLKATSDSVGFEIDHQTGELLSNATFDYE 6478
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 74/165 (44%), Gaps = 27/165 (16%)
Query: 30 GVTLMQVKATD-KDSGKFG-LVEYRLLDNNTDAASYFNLDPATEH---QGPIQDEG---- 80
G+ + V+A D KD+G ++ Y ++ NT A LDP T G I E
Sbjct: 3942 GLQVGVVRAKDAKDAGSNARILSYSIV--NTSADGLLKLDPITGSLTVGGSIDREAFDTI 3999
Query: 81 ------------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
L ST TV + +TD+ND PEF Y S+ E G V V A D
Sbjct: 4000 TLVVSAVDAGIPRLHSTTTVVVNITDVNDNAPEFTRRTYSASILENSTVGQFVLSVQAED 4059
Query: 128 ADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLY 169
D G N +V Y + F +DA +GDI T +LD+E ++ Y
Sbjct: 4060 VDSGANGLVRYELSSGNVGGTFSIDAVSGDIFTALSLDFETRESY 4104
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 13/130 (10%)
Query: 47 GLVEY-RLLDNNTDAASYFNLDPATEHQG-PIQDEGGLSSTATVNIRVTDINDKNPEFQS 104
G++E R LD+ + S FNL + G P L++TA + I++ ++N+ P F
Sbjct: 4299 GIIEVARQLDH--ENVSVFNLTIEADDSGLP-----SLTATAALTIQIGNVNEHAPVFSQ 4351
Query: 105 LPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKA 160
YE S+ E G ++ RV A+DAD+G + V YS+ E + F VDA +G + T +
Sbjct: 4352 PEYEVSIYETAGLGTSIVRVSASDADDGSSGRVSYSLVEGNENGTFAVDAVSGIVTTTAS 4411
Query: 161 LDYEKQQLYL 170
LDYE ++ ++
Sbjct: 4412 LDYEMKRKFV 4421
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 74/175 (42%), Gaps = 26/175 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG---P 75
Y A + +G + V+A D D G GLV Y + N D F +D + P
Sbjct: 6206 YLASIAENASVGDLVFTVRANDADEGTNGLVSYSIRSGNRDG--QFTVDHSNGQIAVLKP 6263
Query: 76 IQDEG-----------------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ E +SS+ATV+I+V D ND P F + + E G
Sbjct: 6264 LDREAVNSYVLTILASDFASVNPMSSSATVSIQVLDSNDNAPVFATKSQRVDLFENVTVG 6323
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
V V+ATD D G N VV Y + P F++D+ TG + + LD E + Y
Sbjct: 6324 TLVALVNATDRDLGLNGVVAYMIETGDPDGRFLIDSVTGALTVAQTLDRESKAEY 6378
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 76/178 (42%), Gaps = 34/178 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGP 75
Y A + G +++ VKATD D G G V Y L + ++S FN+D + E G
Sbjct: 1423 YEASVVENSPTGTSVLTVKATDDDIGSNGAVTYSL----SPSSSLFNIDNTSGVLEVTGS 1478
Query: 76 IQDE-------------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
+ E GG ++TA + V D ND P F Y V E +A
Sbjct: 1479 LDREKQSVYSLNVIAVDGGDPSRTATARATVTVADANDNTPRFSRSLYAAGVSE---SVA 1535
Query: 120 VGR-----VHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
VG V ATDAD G N + YS+ + F +D+ T + K+LD E Y
Sbjct: 1536 VGSTVPVTVSATDADAGANGQLIYSIVGGNINGAFNLDSATASLTVAKSLDRETLSSY 1593
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA-------SYFNLD 67
++L Y + +G TL VKATD D G G + Y + NT + + L
Sbjct: 4872 ETLLYDFSLYENVSVGSTLGTVKATDDDIGANGDILYSIESGNTRDSFDVGRRNGHITLQ 4931
Query: 68 PATEHQGPIQ-------DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD- 116
A +++ +GG LSSTA V++RV D ND P F P+ V E
Sbjct: 4932 RAVDYESVTNYSLIISASDGGSPTLSSTAAVSVRVLDTNDNPPVFVGGPFTVKVRENTPV 4991
Query: 117 GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKA-LDYEKQQLYL 170
+V V A DAD G NA + YS+ E +++++G +R A LD E ++
Sbjct: 4992 STSVFTVSAEDADSGINADLAYSIVAGAEGGQLFINSSSGILRVGGAGLDRESNPHFV 5049
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 69/155 (44%), Gaps = 22/155 (14%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LDPATEH 72
++ L + VKATD DSG G V Y ++ N ++ N LD
Sbjct: 6528 KESVSLTSVIASVKATDSDSGLNGDVVYEIVGGNEESVVAVNRSTGALTVVRSLDRERTD 6587
Query: 73 QGPIQDEG-------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVH 124
Q + + L + A VN+ V D+ND P F Y+ + EG D G V V
Sbjct: 6588 QYRFRIKATDLGSPPSLPAYAFVNLTVEDVNDNPPVFDRSSYQTRITEGTDVGSIVASVS 6647
Query: 125 ATDADEGQNAVVYYSVPEDIP---FVVDANTGDIR 156
A+DAD G N +V YS+ F + A++G+I+
Sbjct: 6648 ASDADSGSNGIVTYSIVSGNKLNVFEIVASSGEIK 6682
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 20/172 (11%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDA------------ASYFNLDPATEHQGPIQ 77
G + +KATD+DSG G + Y ++ N++ + + + E++ ++
Sbjct: 1224 GTVVETLKATDRDSGSNGDISYSIVSGNSEGKFVADKTGNVIVVASLDFEKIREYRLGVE 1283
Query: 78 DEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQ 132
G LS+ + + V D+ND +P F S + SV E G +V V A+D D G
Sbjct: 1284 ARDGGNPQLSAVGNLVVTVVDVNDNDPLFSSSVFTTSVDENVAIGTSVFAVVASDDDSGL 1343
Query: 133 NAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFAT 181
NA+V YS+ D FV+++ +G++ +LD EK Y V + FAT
Sbjct: 1344 NAIVSYSIVAGNSDFAFVINSTSGELTVGNSLDREKTSSYRLTVTATNSFAT 1395
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 22/168 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPATEHQGPI------------ 76
G + V A+D DSG + +R++D + D S + +G +
Sbjct: 3637 GRIVTIVAASDADSGSNAKLTFRIIDGDRNDVFSIGSTSGIVSVKGDLDREIIEGYSLTV 3696
Query: 77 --QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+D+G L +T VNI V DIND PEF L Y +V E G + + A D D G
Sbjct: 3697 EARDQGSPSLRNTTLVNITVADINDNFPEFARLAYSEAVKENISIGSTITTLSAEDLDAG 3756
Query: 132 QNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
N V+Y S ED F + ++ G + T K+LD+E + Y VF +
Sbjct: 3757 SNGDVHYVLGSGDEDGVFKL-SDAGSLVTVKSLDHETKISYQLTVFAV 3803
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 33/170 (19%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL---------- 82
++ V A+D D G+ G V Y+++ N + S F L + +G I G L
Sbjct: 6006 VITVLASDSDVGENGSVTYQIVGGN--SGSTFAL--RSRGKGEIVAVGDLDYEDRTNFTL 6061
Query: 83 ------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
SST V + + ++ND P+F + E G + V A+DAD
Sbjct: 6062 FVEARDGGSPVRSSTVPVYVSILNVNDNRPQFTPATLNVKISEAAVPGSQITTVSASDAD 6121
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEKQQLYLERV 173
G NAV+ YSV E + F V+A+TG + + LD E + Y ++
Sbjct: 6122 SGDNAVLQYSVLETVGSVGYGKFGVNASTGQVTLLEPLDRENRSQYSLKI 6171
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 85/182 (46%), Gaps = 32/182 (17%)
Query: 14 SDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA------------ 61
+ S+F G + + LG +++ + ATD+D+G V + +L + D A
Sbjct: 8568 TQSVFVGRV-EENATLGSSVLLLSATDRDTGLNADVTFSILSGDEDGAFRLSDVTSGLLV 8626
Query: 62 ------------SYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF 109
F + A H G Q L TA VN+ ++++ND++P F SL Y
Sbjct: 8627 VNGSLDRESRKRHVFEVQVANIHPGVQQSV--LFDTAFVNLTISNVNDESPVFSSLLYSA 8684
Query: 110 SVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQ 167
S+ E + G ++ V A+D D+ V Y + + F +++ +G + T +ALD E +
Sbjct: 8685 SILENRPPGQSLVTVSASDKDDDN---VSYRFRDSVTDFTLNSTSGVVTTARALDRETKA 8741
Query: 168 LY 169
+Y
Sbjct: 8742 IY 8743
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 71/161 (44%), Gaps = 28/161 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y R+ +G +++ V A D DS G V Y L T +A F ++ +T
Sbjct: 8978 YNVSVREDAGMGASVLTVSAFDPDSHDAGQVFYSL---GTGSAVPFTINSSTGVISVARP 9034
Query: 71 ----EHQGPIQD------EGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG 117
P+ + + G+ S V + VTD+ND P F L Y +V G
Sbjct: 9035 SDIDMETNPLYNFTVVAIDAGIPQKSGEVIVRVTVTDVNDNAPVFTKLFYS-AVVNGTSD 9093
Query: 118 LAVGRVHATDADEGQNAVVYYSV-PEDIP--FVVDANTGDI 155
++ RV A+DAD G N V YS+ P FV++ TGDI
Sbjct: 9094 TSLVRVSASDADSGLNGAVTYSILPSQFSDRFVINKTTGDI 9134
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 80/183 (43%), Gaps = 28/183 (15%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA----- 69
D +FY + +G V+ATD DSG L+ Y L TDA+S F +D
Sbjct: 8465 DQMFYRWEILENVTIGKAGFSVQATDADSGINSLIRYSL----TDASSTFTIDHRFGDLS 8520
Query: 70 ------TEHQGPIQ------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
E Q D G L+ TATV + D+ND P F + V E
Sbjct: 8521 TLKTLDRETQASYNLTVLAVDSGSPRLTGTATVAAILLDVNDNAPTFTQSVFVGRVEENA 8580
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSV---PEDIPF-VVDANTGDIRTNKALDYEKQQLYL 170
G +V + ATD D G NA V +S+ ED F + D +G + N +LD E ++ ++
Sbjct: 8581 TLGSSVLLLSATDRDTGLNADVTFSILSGDEDGAFRLSDVTSGLLVVNGSLDRESRKRHV 8640
Query: 171 ERV 173
V
Sbjct: 8641 FEV 8643
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 26/175 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL---DNNT----DAASYFNLDPATE 71
Y R+ +G+ ++ V A D D+G G + YR+L DNNT + + L + +
Sbjct: 8152 YNVSLREDSVVGIRIITVVAADNDTGVNGQLAYRILTGNDNNTFFLDELSGNLTLRKSVD 8211
Query: 72 HQ-------------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
++ G + G L STATV I V D ND P+ ++ PE G
Sbjct: 8212 YEMRTLYSIVVEAKDGSLH--GSLQSTATVVITVEDKNDNTPQIETSQDVLFFPENSPVG 8269
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ + A D D G+N + +++ F +D+ +G + ++LD E ++ Y
Sbjct: 8270 PVLAEIKAQDRDSGKNGKLNFAITSGNNGGIFSLDSLSGQLSIVRSLDRETKKNY 8324
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 76/170 (44%), Gaps = 20/170 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL-----DNNTDAASYF----NLD-- 67
Y A+ + +G +++Q+ A+D D G G + + L+ D N A NLD
Sbjct: 1110 YRAVLNESAGVGFSVLQLTASDPDVGTNGQIAFSLVSGDIGDFNLSAGGLLKTARNLDYE 1169
Query: 68 -PATEHQGPIQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGR 122
T H ++ G S TA V + V D ND P F + VPE G V
Sbjct: 1170 RRQTYHLVVQVEDFGFPQHSGTAAVTVEVLDENDNAPVFNTTTVFADVPENVATGTVVET 1229
Query: 123 VHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ ATD D G N + YS+ + FV D TG++ +LD+EK + Y
Sbjct: 1230 LKATDRDSGSNGDISYSIVSGNSEGKFVAD-KTGNVIVVASLDFEKIREY 1278
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDA-DEGQNA- 134
DE G + TA V I V DIND P F+ Y FSV EG GL VG V A DA D G NA
Sbjct: 3902 DEVGNTGTALVQITVEDINDNPPVFERDIYRFSVAEGSGTGLQVGVVRAKDAKDAGSNAR 3961
Query: 135 VVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
++ YS+ D +D TG + ++D E
Sbjct: 3962 ILSYSIVNTSADGLLKLDPITGSLTVGGSIDRE 3994
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 79/180 (43%), Gaps = 35/180 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y A + +G T++QV A D+DSG+ G V Y L + + F +D T G I
Sbjct: 897 YVASVGEDLAVGRTVIQVTAKDRDSGRNGQVRYSL---TAASPTIFQIDAFT---GSITL 950
Query: 79 EGGL--SSTATVNIRV-----------------------TDINDKNPEFQSLPYEFSVPE 113
L +T N+ V DIND P FQ Y +V E
Sbjct: 951 LSSLDRETTGEYNMTVFARDDAASAELRQSSSASVVVQVLDINDNAPLFQKAVYTATVSE 1010
Query: 114 G-QDGLAVGRVHATDADEGQNAVVYYS-VPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
G +V +V ATD D G NA+V YS V ++ F ++++ G + +LD+E + Y
Sbjct: 1011 SFSVGTSVVQVKATDLDTGLNALVSYSFVNGNVGQAFGINSSNGLVTVAASLDFETRPAY 1070
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 63/156 (40%), Gaps = 19/156 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLV-EYRLLDNNTDAASYFNLDPATEHQGPIQDE-------- 79
+G + QV A D D+G G+V Y L N D + + E
Sbjct: 4574 IGFEITQVSAEDTDAGLNGVVTAYNLTKGNFDGVFSISQTGRISVSNSLNREETGFYRLT 4633
Query: 80 -----GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE 130
GG L+ + + + V D+ND +P FQ Y F+V E G G V A D D
Sbjct: 4634 VAAIDGGSPALTGNSIIAVNVLDVNDNDPRFQQAKYVFNVSEDALIGSVAGAVGAVDIDS 4693
Query: 131 GQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEK 165
G N V YS P F VD G + + +LD K
Sbjct: 4694 GLNGQVKYSAPSSGRYFSVDPANGIMTVSGSLDRVK 4729
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 66/154 (42%), Gaps = 17/154 (11%)
Query: 33 LMQVKATDKDSGKFGLVEYRLL---------DNNTDAASYFNLDPATEHQGPI----QDE 79
L +V ATDKDSG G + Y L + T S NLD + + + +D
Sbjct: 2460 LGRVSATDKDSGSNGQILYSLTPSGVFQIGRSSGTLTLSVANLDRELKTRYSLTVTARDR 2519
Query: 80 G--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
G L ++ V + V DIND P F Y +V E G A+ + ATD D G N V
Sbjct: 2520 GSPALLTSVGVTVDVLDINDNAPVFSKQRYVGNVSEAASKGTAILGLTATDLDSGLNGQV 2579
Query: 137 YYS-VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y VP V+ TG + T LD E Y
Sbjct: 2580 RYRLVPPSNDLDVNPGTGVLSTKGTLDRESTSQY 2613
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Query: 75 PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
PI D+ SS A + V D+ND P F+ Y SV E D G V A D DEG+N
Sbjct: 10190 PIVDQVA-SSFAKFTVTVLDVNDNKPLFEQSGYNVSVSEDVDVGSTVFTASAADNDEGRN 10248
Query: 134 AVVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
A+V Y V F ++ G++ +LD E Q ++
Sbjct: 10249 AIVVYEIVSGSSSFAINTTAGEVTVINSLDREVQSNFV 10286
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Query: 71 EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
E + + D S+ +I + +ND P F + Y+FSV EG G VG+V A D D
Sbjct: 2296 EAEIRLSDGSAFSNLQKSSISILLVNDNPPIFGAPKYDFSVKEGVSIGTEVGKVSAADGD 2355
Query: 130 E-----GQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYE 164
G + V YS P+ I F VDA++G I TN +LD E
Sbjct: 2356 SSLGLFGSDGFVEYSKFSGDPDGI-FSVDASSGSIVTNTSLDRE 2398
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 78 DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNA 134
DEG L+ +A V + V+D ND P F + S+ E G V ATD D G N
Sbjct: 2726 DEGASPLTGSAQVKVTVSDENDNTPVFVNAVRNISLREDSPRGTEVATFTATDRDIGNNG 2785
Query: 135 VVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+V YS + F ++ +TG + +++LD+EK Q Y
Sbjct: 2786 LVTYSFGSFLAEFNINGSTGVVVLSRSLDFEKTQRY 2821
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 32/181 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDS-----GKFGLVEYRLLDNNTDAASYFNLDPAT--- 70
Y ++ +G + +V A D DS G G VEY + D F++D ++
Sbjct: 2332 YDFSVKEGVSIGTEVGKVSAADGDSSLGLFGSDGFVEYSKFSGDPDG--IFSVDASSGSI 2389
Query: 71 ------EHQGP-------IQDEG-------GLSSTATVNIRVTDINDKNPEFQSLPYEFS 110
+ + P ++ E LS+ V + + D+ND +P F Y F+
Sbjct: 2390 VTNTSLDREAPGVPTSVLVRVEASNRNASPALSAVVPVFVTIEDVNDNSPVFDEAAYVFN 2449
Query: 111 VPEGQDGLAV-GRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKA-LDYEKQQL 168
V E V GRV ATD D G N + YS+ F + ++G + + A LD E +
Sbjct: 2450 VTEMAAAFTVLGRVSATDKDSGSNGQILYSLTPSGVFQIGRSSGTLTLSVANLDRELKTR 2509
Query: 169 Y 169
Y
Sbjct: 2510 Y 2510
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 16/155 (10%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDNNT-------DAASYFNLDPATEHQGPIQ------ 77
VT++ ++A DKD + G + Y L+ +N + + + +Q +Q
Sbjct: 9819 VTVVTIRAVDKDVRENGRIVYSLVKSNGRPLFQIGNESGVISTAVELRNQSLVQVVVIAS 9878
Query: 78 DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNA 134
D G LSS T+++ VT+ + P F Y FSV E G A+G + T + +
Sbjct: 9879 DLGKPPLSSNLTLSVNVTNEEVEAPLFSKPFYNFSVIESAKLGTAIGTIEVTSRNASGYS 9938
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
VV+ + F V++ +GDI +LD EK Y
Sbjct: 9939 VVFRITAGNEEFSVNSTSGDIILIDSLDREKVVSY 9973
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 26/172 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKF---------------GLVEYR-LLDNNTDAAS 62
Y ++ LG +L++V A+D D K G++ LD +T++
Sbjct: 3526 YAVQVQENASLGKSLLKVTASDLDGDKLLYSIPSVVPFSVNSSGIIRVNGSLDRDTESRI 3585
Query: 63 YFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVG 121
F ++ A E + P + S A V + + D+ND +P F Y +V E G V
Sbjct: 3586 VFAVN-AQESRSPFRTA---SVPALVTVTLLDVNDNSPVFNQSAYISAVSENALPGRIVT 3641
Query: 122 RVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
V A+DAD G NA + + + + D+ F + + +G + LD E + Y
Sbjct: 3642 IVAASDADSGSNAKLTFRIIDGDRNDV-FSIGSTSGIVSVKGDLDREIIEGY 3692
Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 46/99 (46%), Gaps = 20/99 (20%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQ------DGLAVGR----VHATDADEGQNAVVY 137
V + V D+ND P F VP+GQ + LAVGR V A D D G+N V
Sbjct: 877 VIVFVADVNDNPPVF--------VPDGQYVASVGEDLAVGRTVIQVTAKDRDSGRNGQVR 928
Query: 138 YSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERVF 174
YS+ P F +DA TG I +LD E Y VF
Sbjct: 929 YSLTAASPTIFQIDAFTGSITLLSSLDRETTGEYNMTVF 967
Score = 42.7 bits (99), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 56/117 (47%), Gaps = 9/117 (7%)
Query: 59 DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDG 117
+A +NL A G D L S+A V + V D+ND +P F Y+F V E G
Sbjct: 4202 EAVDLYNLTVAASIPG--SDGRFLRSSAAVTVVVLDVNDHSPIFSDFLYKFLVSEDASVG 4259
Query: 118 LAVGRVHATDA-DEGQNAVV----YYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+VGRV A D D G NA + + S F V +++G I + LD+E ++
Sbjct: 4260 SSVGRVEAIDTNDVGVNAAIKSYRFTSGNSRNHFSV-SSSGIIEVARQLDHENVSVF 4315
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 21/171 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLD 67
Y A + +G ++ V+A D DSG GLV Y L N D + +LD
Sbjct: 4038 YSASILENSTVGQFVLSVQAEDVDSGANGLVRYELSSGNVGGTFSIDAVSGDIFTALSLD 4097
Query: 68 PATE---HQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-V 120
T + +GG LSS++TV + + ++ D P F Y+FS+ E + + V
Sbjct: 4098 FETRESYRMTVVARDGGSPSLSSSSTVEVNINNLIDTPPLFDQDVYKFSILEDRKSRSFV 4157
Query: 121 GRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G+V A ++ + V Y + E+ + ++A TG I LD E LY
Sbjct: 4158 GQVSAKTGEKNGDVAVSYEIEGTENGSYAINA-TGVIFLLAMLDREAVDLY 4207
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 65/152 (42%), Gaps = 18/152 (11%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD---------AASYFNL 66
SL Y A + G +L+ V A+DKD V YR D+ TD + L
Sbjct: 8679 SLLYSASILENRPPGQSLVTVSASDKDDDN---VSYRFRDSVTDFTLNSTSGVVTTARAL 8735
Query: 67 DPATE---HQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR 122
D T+ + I +G S+ T I V D ND PEF Y +V E G V
Sbjct: 8736 DRETKAIYNLTVIATDGARSAEVTAIITVQDDNDNAPEFAK-SYRANVSESAPVGTVVLT 8794
Query: 123 VHATDADEGQNAVVYYSV-PEDIPFVVDANTG 153
A+D D G N V Y+V P F V++ TG
Sbjct: 8795 ASASDRDVGINEEVSYAVGPLSDFFEVNSTTG 8826
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVP 141
S++ +N+RV IND P F F V E ++ + G V A D D ++ + YS+P
Sbjct: 5870 SNSLKINVRVELINDNKPTFTQGSTTFHVTEDVRNSTSFGAVKAEDGD--ADSRLLYSLP 5927
Query: 142 EDI-PFVVDANTGDIRTNKALDYEKQQLY 169
D+ F +++ TG +RT LD E + Y
Sbjct: 5928 VDLTSFDINSLTGVLRTKDLLDREVKDSY 5956
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 23/124 (18%)
Query: 18 FYGAMARDKHELGVTL-MQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------ 70
Y A + +G T+ + V ATD D+G G + Y ++ N + A FNLD AT
Sbjct: 1525 LYAAGVSESVAVGSTVPVTVSATDADAGANGQLIYSIVGGNINGA--FNLDSATASLTVA 1582
Query: 71 ---------EHQGPIQ-DEGGLS---STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG 117
++ IQ +GG S STA + + V+D+ND P F + + EGQ+
Sbjct: 1583 KSLDRETLSSYRLTIQASDGGTSPRSSTARIFVGVSDVNDNPPVFTGVA-NVTFTEGQNK 1641
Query: 118 LAVG 121
+ V
Sbjct: 1642 IVVA 1645
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 76/171 (44%), Gaps = 23/171 (13%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN-------TDAASYFNLDPA 69
L Y ++ +G T+ + A D D+G G V Y L + +DA S + +
Sbjct: 3729 LAYSEAVKENISIGSTITTLSAEDLDAGSNGDVHYVLGSGDEDGVFKLSDAGSLVTVK-S 3787
Query: 70 TEHQGPIQDE-------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
+H+ I + GG L+S+ V I V D++D+ P+F ++ SV E G
Sbjct: 3788 LDHETKISYQLTVFAVDGGRPPLNSSVLVAITVIDVDDRAPQFSQGQFDISVSENVSVGS 3847
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ V A D D +A V Y + FV+ + G++ N +LD E Y
Sbjct: 3848 TLASVRALDPD--SSAPVRY-LDSSAVFVILGD-GNLVLNSSLDREVVDFY 3894
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 25/164 (15%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY---------RLLDNNTDAASYFNLD 67
LFY A+ + +L++V A+D DSG G V Y R + N T +F+ D
Sbjct: 9082 LFYSAVVNGTSD--TSLVRVSASDADSGLNGAVTYSILPSQFSDRFVINKTTGDIFFS-D 9138
Query: 68 PATEHQ-----GPIQDEGGLSS----TATVNIRVTDINDKN-PEFQSLPYEFSVP-EGQD 116
A + ++ G S TATV I V + N P F VP + +
Sbjct: 9139 LALNQSFNASLEVVAEDSGFPSLNAKTATVQINVLIPRETNLPPIVETFMNFFVPFDATN 9198
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKA 160
G VG+V+A+D D ++V + F +D+ TG+I TN +
Sbjct: 9199 GRRVGKVNASDPD--GDSVTFLLTDSFQKFSIDSQTGEISTNTS 9240
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 35/187 (18%)
Query: 10 LEMTSDSLFYGAMARDKHELG--VTLMQVKATDKDSGKFGLVEYRLL---DNNT------ 58
E+TS Y A + ++G V +Q ++D+D GK + Y ++ D +T
Sbjct: 4452 FEITS----YTATVSEDADVGDVVATIQASSSDEDPGKTNGIVYGIVSGDDESTFTVDGS 4507
Query: 59 -----------DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPY 107
+A + + L + P ++ L+ AT+ + V D+ND+ P F S
Sbjct: 4508 GVVTLASELDREAVANYTLVVSATRAVPGRN---LTGYATLFVTVGDVNDREPSFLSSFK 4564
Query: 108 EFSVPEGQD-GLAVGRVHATDADEGQNAVVY-YSVPE---DIPFVVDANTGDIRTNKALD 162
E +V EG G + +V A D D G N VV Y++ + D F + + TG I + +L+
Sbjct: 4565 EVNVSEGVPIGFEITQVSAEDTDAGLNGVVTAYNLTKGNFDGVFSI-SQTGRISVSNSLN 4623
Query: 163 YEKQQLY 169
E+ Y
Sbjct: 4624 REETGFY 4630
Score = 39.3 bits (90), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 75/162 (46%), Gaps = 22/162 (13%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNN------TDAASYF-----NLDPATEHQGPI- 76
LG ++++V A+D D G G V Y L++ N DA S +LD + + +
Sbjct: 4364 LGTSIVRVSASDADDGSSGRVSYSLVEGNENGTFAVDAVSGIVTTTASLDYEMKRKFVLI 4423
Query: 77 ---QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE-- 130
D GG+++TA + + VT++ D P F+ Y +V E D G V + A+ +DE
Sbjct: 4424 VEAIDGGGMNATARIVVNVTNVVDTVPIFEITSYTATVSEDADVGDVVATIQASSSDEDP 4483
Query: 131 -GQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLY 169
N +VY V D F VD +G + LD E Y
Sbjct: 4484 GKTNGIVYGIVSGDDESTFTVDG-SGVVTLASELDREAVANY 4524
Score = 38.9 bits (89), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP 145
T+ + + D+ND P F ++ E G + +V ATDAD G N +V YS+
Sbjct: 10508 TIEVALIDVNDNKPRFAVSMVTKTISETMSVGAEIVQVPATDADSGANGIVSYSIV---- 10563
Query: 146 FVVDANTGDIRTNKALDYEKQQLYLER 172
TG+ R A+D +Y+ R
Sbjct: 10564 ------TGNARDVFAVDSANGSVYVVR 10584
Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG-LAVGRVHATDADEGQNAVVY 137
+G S+ + + + V D+ND +P+F + Y S+ EG V V A+D+D G+N V
Sbjct: 5964 DGLFSAVSNLTVVVDDVNDNSPQFNASSYFASLSEGGGANRPVITVLASDSDVGENGSVT 6023
Query: 138 YSV 140
Y +
Sbjct: 6024 YQI 6026
Score = 36.2 bits (82), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI 144
+ATV + + DIND P+ L F G + + ATD D G N + +S+
Sbjct: 9574 SATVTVTIADINDNTPQVDPLTTAFVPFNATVGSHIVVIQATDPDAGVNGKLSFSIVSGN 9633
Query: 145 P---FVVDANTGDI 155
F ++++TG+I
Sbjct: 9634 SAQFFAINSSTGEI 9647
>gi|348552360|ref|XP_003461996.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Cavia
porcellus]
Length = 3172
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 84/183 (45%), Gaps = 34/183 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y R+ E+G ++ ++ATD D+ + YRLL+ + F +D +
Sbjct: 522 YRERVRENLEVGYEVLTIRATDGDAPSNANMRYRLLEG---SGGVFEIDARSGVVRTRAV 578
Query: 71 ---EHQGPIQ----------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG 117
E Q Q + G LS+TATV+I V D ND P+F Y VPE
Sbjct: 579 VDREEQAEYQLLVEANDQGRNPGPLSATATVHILVEDENDNYPQFSEKRYVVQVPE---D 635
Query: 118 LAVG----RVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
LAV RV ATD D+GQNA ++YS+ F + + +G + LD+E + Y
Sbjct: 636 LAVNTPVLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYT 695
Query: 171 ERV 173
R+
Sbjct: 696 LRI 698
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQ-- 73
+G +++ ++A D+D+ ++ Y+L NT + LD E Q
Sbjct: 866 VGSSVLTLRARDRDANS--VITYQLTGGNTRNRFALSSQSGGGLITLALPLDYKQERQYV 923
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G S T V I VTD N P FQS Y SV E + G + + ATD D G
Sbjct: 924 LAVTASDGTRSHTVQVFINVTDANTHRPVFQSSHYTVSVSEDRPVGTPIATISATDEDTG 983
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + +P F +D +TG I T LDYE Q Y
Sbjct: 984 ENARITYVLEDPVPQFRIDPDTGTIYTMTELDYEDQAAY 1022
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 79/181 (43%), Gaps = 33/181 (18%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY------------------------RL 53
FY + +++QV ATD+DSG G + Y R
Sbjct: 1060 FYQGSVFEDAPPSTSVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRR 1119
Query: 54 LDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
LD A +NL +G LS++ + + V DIND P F+ E V E
Sbjct: 1120 LDRENVAV--YNLRALAVDRG---IPAALSASVDIQVTVLDINDNPPVFERDELELFVEE 1174
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLY 169
G V ++HA D DEG NA + Y + E ++P F +D +GD+R LD+E ++ Y
Sbjct: 1175 NSPVGSVVAKIHANDPDEGPNAQIMYQIVEGNVPEVFQLDLLSGDLRALAELDFEVRRDY 1234
Query: 170 L 170
+
Sbjct: 1235 M 1235
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 39/176 (22%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQGPIQDE 79
+++V+ATD+D G+ + Y ++ N Y + + E+ I+ +
Sbjct: 642 VLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLRIKAQ 701
Query: 80 GG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
G ++S+ V+++V D+ND P F S P++ +V E G +V + A DAD G+N
Sbjct: 702 DGGRPPLINSSGLVSVQVLDVNDNAPIFVSSPFQATVLENVPLGHSVLHIQAVDADSGEN 761
Query: 134 AVVYYSV--------------PE------DIPFVVDANTGDIRTNKALDYEKQQLY 169
A + Y + PE D PF + ++G I LD E + Y
Sbjct: 762 ARLSYRLVDTGSAAVGVGSAGPEDPDSTPDFPFQIHNSSGWITVCAELDREAVEHY 817
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 37/170 (21%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPAT---------------- 70
G T++++ A D D G+ G + Y+ L D ++ YF +D AT
Sbjct: 425 GTTVIELVAHDPDEGEAGRLSYQMEALFDERSNG--YFLIDGATGTVSTARELDRETKDT 482
Query: 71 --------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
+H P + S+ + + V+D ND +P F+ Y V E + G V
Sbjct: 483 HVLKVSAVDHGSPRR-----SAATYLTVTVSDTNDHSPVFEQSEYRERVRENLEVGYEVL 537
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+ ATD D NA + Y + E F +DA +G +RT +D E+Q Y
Sbjct: 538 TIRATDGDAPSNANMRYRLLEGSGGVFEIDARSGVVRTRAVVDREEQAEY 587
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 76/187 (40%), Gaps = 28/187 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y + +G + + ATD+D+G+ + Y L D F +DP T
Sbjct: 955 SSHYTVSVSEDRPVGTPIATISATDEDTGENARITYVL----EDPVPQFRIDPDTGTIYT 1010
Query: 71 ------EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E Q +D G S T ++ I + D ND P F Y+ SV E
Sbjct: 1011 MTELDYEDQAAYTLAITARDNGIPQKSDTTSLEILILDANDNAPRFLRDFYQGSVFEDAP 1070
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
+V +V ATD D G N + Y+ D F ++ +G IRT + LD E +Y
Sbjct: 1071 PSTSVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRENVAVYNL 1130
Query: 172 RVFLISK 178
R + +
Sbjct: 1131 RALAVDR 1137
Score = 42.4 bits (98), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 73/182 (40%), Gaps = 42/182 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP-----IQDEGG-- 81
LG +++ ++A D DSG+ + YRL+D + A + P P I + G
Sbjct: 744 LGHSVLHIQAVDADSGENARLSYRLVDTGSAAVGVGSAGPEDPDSTPDFPFQIHNSSGWI 803
Query: 82 ---------------------------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
+SS+A+V+I V D+ND +P F YE + E
Sbjct: 804 TVCAELDREAVEHYSFGVEAVDHGSPPMSSSASVSITVLDVNDNDPVFTQPLYELRLNED 863
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQL 168
G +V + A D D N+V+ Y + + G I LDY++++
Sbjct: 864 AAVGSSVLTLRARDRDA--NSVITYQLTGGNTRNRFALSSQSGGGLITLALPLDYKQERQ 921
Query: 169 YL 170
Y+
Sbjct: 922 YV 923
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 12/98 (12%)
Query: 99 NPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP------EDIPFVVDAN 151
NP+F Y+ SVPE Q G V + A D DEG+ + Y + + F++D
Sbjct: 406 NPQFPLPSYQVSVPENQPAGTTVIELVAHDPDEGEAGRLSYQMEALFDERSNGYFLIDGA 465
Query: 152 TGDIRTNKALDYEKQQLYLERVFLI-----SKFATSYL 184
TG + T + LD E + ++ +V + + A +YL
Sbjct: 466 TGTVSTARELDRETKDTHVLKVSAVDHGSPRRSAATYL 503
>gi|291407990|ref|XP_002720200.1| PREDICTED: protocadherin 11 X-linked isoform 1 [Oryctolagus
cuniculus]
Length = 1350
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 80/174 (45%), Gaps = 26/174 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
F + + G L ++ ATD DSG+ + Y L TDA FNLD T
Sbjct: 470 FISISVPENNSPGTQLTKISATDADSGRNAEINYLL---GTDAPPEFNLDHRTGILTAVK 526
Query: 71 ----EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--QD 116
E Q +D G L + ATV + V D ND +P F Y F VPE +
Sbjct: 527 KLDREKQEKYYFTVLAKDNGIPPLITNATVLVTVLDQNDNSPIFTHNEYNFYVPENLPRH 586
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLY 169
G VG + TD D G+N+ V S+ + + F +D TG IR N + D EKQ+ Y
Sbjct: 587 G-TVGLITVTDPDYGENSAVTLSIVDVNDEFTIDPQTGVIRPNISFDREKQESY 639
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+ ++ + ++V D ND P F SVPE G + ++ ATDAD G+NA + Y +
Sbjct: 446 LNQSSMLLVKVKDENDNAPVFTQPFISISVPENNSPGTQLTKISATDADSGRNAEINYLL 505
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
D P F +D TG + K LD EKQ+ Y
Sbjct: 506 GTDAPPEFNLDHRTGILTAVKKLDREKQEKY 536
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 10/98 (10%)
Query: 78 DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
++GG SSTA + + V D ND P F+ E S+PE G +V ++HATDAD G+N
Sbjct: 222 EDGGFPQRSSTAILQVSVADTNDNRPVFKENEIEVSIPENAPVGTSVTQLHATDADIGEN 281
Query: 134 AVVYYSVPEDIP------FVVDANTGDIRTNKALDYEK 165
A +++ + F ++ TG I + LD E+
Sbjct: 282 AKIHFYFSNLVSNIAKRLFHLNTTTGLITVKEPLDREE 319
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 64/150 (42%), Gaps = 30/150 (20%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP---------------I 76
T+ + TD D G+ V ++D N + F +DP T P +
Sbjct: 588 TVGLITVTDPDYGENSAVTLSIVDVNDE----FTIDPQTGVIRPNISFDREKQESYTFYV 643
Query: 77 QDEGG----LSSTATVNIRVTDINDKNPEFQSLP----YEFSVPEGQDGLAVGRVHATDA 128
+ E G SSTA V I V D+ND P F P YE +P G V +V A D
Sbjct: 644 KAEDGGRVSRSSTAKVTINVVDVNDNKPVFVIPPSNYSYELVLPSTNPGAVVFQVVAVDN 703
Query: 129 DEGQNAVVYYSVPEDIP---FVVDANTGDI 155
D G NA + YS+ F++D +G+I
Sbjct: 704 DTGMNAEIRYSIAGGNAKGLFIIDQTSGNI 733
Score = 35.8 bits (81), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 66/175 (37%), Gaps = 30/175 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEY-----------RLLDNNTDAASYFNLDPATEHQGPIQ 77
+G ++ Q+ ATD D G+ + + RL NT +P + P
Sbjct: 264 VGTSVTQLHATDADIGENAKIHFYFSNLVSNIAKRLFHLNTTTGLITVKEPLDREEAPSH 323
Query: 78 -------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA--------VGR 122
D G + + A V + VTDIND P + Y + G L+ V
Sbjct: 324 KLLVLATDGGSMPARAMVLVNVTDINDNVPSI-DIRYIINPTNGTVVLSENAPLNTKVAL 382
Query: 123 VHATDADEGQNAVVYYSVPEDIPF---VVDANTGDIRTNKALDYEKQQLYLERVF 174
+ TD D N V ++PF V +N + T LDYE + Y ++
Sbjct: 383 ITVTDKDADHNGRVTCFTDHEVPFRLRPVFSNQFLLETAAYLDYESTREYAIKLL 437
>gi|410913769|ref|XP_003970361.1| PREDICTED: protocadherin gamma-C5-like [Takifugu rubripes]
Length = 837
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVP 141
S TA + ++V D+ND P F+ Y+ S+PE G +G V V ATD DEG N + YS+
Sbjct: 220 SGTAKITVKVLDVNDNVPVFEHSVYKISLPENGANGSFVITVKATDIDEGPNGEIEYSLG 279
Query: 142 EDIP------FVVDANTGDIRTNKALDYEKQQLY 169
P F +DA TGD+ K LDYE Q Y
Sbjct: 280 VHTPPSVLSIFHIDAVTGDVSLKKQLDYETQTSY 313
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 73/178 (41%), Gaps = 36/178 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS-----YFNLDPATEH------------ 72
G L V A+D D G+ + Y +LD+ S Y N D + +
Sbjct: 468 GSILYSVSASDLDFGENAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSFDYEKLKV 527
Query: 73 -----QGPIQDEGGLSSTATVNIRVTDINDKNPE--------FQSLPYEFSVPEGQDGLA 119
Q Q LSS T+++ + D ND P SL ++ + G
Sbjct: 528 FQIRVQAKDQGSPSLSSNTTIHVFILDQNDNAPAVIYPSSAALGSLSHQRMPRSAKAGHL 587
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKAL---DYEKQQLYLE 171
+ +V A DAD G NA + Y + E F V+ TG++RT +A+ D Q+L +E
Sbjct: 588 LTKVTAVDADSGHNAWISYRLAEATDASLFTVNQYTGEVRTKRAVSEQDDSSQRLLIE 645
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 17/138 (12%)
Query: 46 FGLVEYRLLDNNTDAASYFNLD-PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQS 104
+ LV +LD T S +N++ AT+ P LSS + + +TD+ND P F
Sbjct: 402 YALVTSGVLDRET--ISEYNIEITATDSGSP-----PLSSKKIIPVSITDVNDNPPVFTQ 454
Query: 105 LPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV----PEDIP----FVVDANTGDI 155
Y + E G G + V A+D D G+NA + YS+ +D+ ++++ G I
Sbjct: 455 PSYNVYLKENGVPGSILYSVSASDLDFGENAKISYSILDSKVQDVSVSSYVYINSDNGSI 514
Query: 156 RTNKALDYEKQQLYLERV 173
+ + DYEK +++ RV
Sbjct: 515 YSMHSFDYEKLKVFQIRV 532
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 67/159 (42%), Gaps = 24/159 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLDPAT-----------EHQG--- 74
G ++ VKATD D G G +EY L + S F++D T E Q
Sbjct: 255 GSFVITVKATDIDEGPNGEIEYSLGVHTPPSVLSIFHIDAVTGDVSLKKQLDYETQTSYR 314
Query: 75 ---PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDA 128
+D+G + +V + V DIND PE +VPE + G V + D
Sbjct: 315 IDVSAKDKGFPKMEGRCSVQVDVFDINDNAPEIVLTSKPTNVPEDSRSGTVVALLSVRDL 374
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYE 164
D +N V +P+ PF + + G+ + T+ LD E
Sbjct: 375 DSSENGKVKLQLPKHSPFTLKPSFGNNYALVTSGVLDRE 413
>gi|312378848|gb|EFR25304.1| hypothetical protein AND_09493 [Anopheles darlingi]
Length = 3184
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 68/143 (47%), Gaps = 21/143 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------ 71
Y A + +G +++Q+ ATD D G G V+Y L + D S F +DP +
Sbjct: 1260 LYQATIPEDALIGTSVVQIGATDLDMGLNGRVKYALSQKDMDEGS-FVVDPISGVIRTNK 1318
Query: 72 ----------HQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
H I + G +SST V IR+ D+ND P F S VPE G
Sbjct: 1319 GLDRESIPVYHLSAIASDKGTPTMSSTVEVQIRLDDVNDSPPTFASDKLTLYVPENSPVG 1378
Query: 118 LAVGRVHATDADEGQNAVVYYSV 140
VG ++A D DEG NA+V+YS+
Sbjct: 1379 SVVGEIYAHDPDEGVNAIVHYSI 1401
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 82/181 (45%), Gaps = 33/181 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDAASYFNLDPATEHQGP 75
Y A + +G T++ V ATD D G + Y L D N A F ++ T G
Sbjct: 1151 YSASVFEDAPIGTTVLVVSATDSDVGINAQITYLLNDESVNGLGANEPFTINAQT---GA 1207
Query: 76 I-------------------QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
+ +GG LS T V I VTD+ND P F+ Y+ ++PE
Sbjct: 1208 VVTNAKLDRETTAGYLLTVTAKDGGNPSLSDTTDVEIAVTDVNDNAPVFKVPLYQATIPE 1267
Query: 114 -GQDGLAVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQL 168
G +V ++ ATD D G N V Y++ + + FVVD +G IRTNK LD E +
Sbjct: 1268 DALIGTSVVQIGATDLDMGLNGRVKYALSQKDMDEGSFVVDPISGVIRTNKGLDRESIPV 1327
Query: 169 Y 169
Y
Sbjct: 1328 Y 1328
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 80/187 (42%), Gaps = 39/187 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS-----YFNLDPATEHQ 73
+ A R+ +G T++ ++ATD+D GK +EY + + S F +D +
Sbjct: 721 FHATVREGVSVGSTVITIRATDQDIGKNAEIEYSITSITGERESPIDSQKFRIDARS--- 777
Query: 74 GPIQDEGGL-------------------------SSTATVNIRVTDINDKNPEFQSLPYE 108
G I L S+T TV +++ D ND P+F Y
Sbjct: 778 GTISTRSALDREVSGMYTIAVTASDMATPQTERKSATTTVLVKILDDNDNYPQFSERTYT 837
Query: 109 FSVPEGQ---DGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALD 162
V E Q + + + ATDAD+G NA + +++ F +D+ +GD+ K LD
Sbjct: 838 VQVREDQWTNENNVIAHIQATDADQGNNAAIRFAIIGGNTQSQFSIDSMSGDVSLVKPLD 897
Query: 163 YEKQQLY 169
YE + Y
Sbjct: 898 YESVRSY 904
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 25/160 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI---------------- 76
+ ++ATD D G + + ++ NT S F++D + +
Sbjct: 852 IAHIQATDADQGNNAAIRFAIIGGNTQ--SQFSIDSMSGDVSLVKPLDYESVRSYRLVIR 909
Query: 77 -QDEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
QD G S + T + V D ND P F + ++ +V E G + RV A DADEG
Sbjct: 910 AQDGGSPSRSNTTQLLVNVLDANDNAPRFYTSQFQEAVLESVPVGYNIVRVQAYDADEGA 969
Query: 133 NAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
N+ + YS+ + +P VD TG I T K LD E+Q Y
Sbjct: 970 NSEITYSILNRDDSMPLAVDPRTGWIHTTKGLDREEQSRY 1009
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
D G + TA VNI +TD N+ P F++ PY SV E G V V ATD+D G NA +
Sbjct: 1122 DSGQRTDTAIVNINITDANNFAPVFENAPYSASVFEDAPIGTTVLVVSATDSDVGINAQI 1181
Query: 137 YYSVPEDI--------PFVVDANTGDIRTNKALDYEKQQLYL 170
Y + ++ PF ++A TG + TN LD E YL
Sbjct: 1182 TYLLNDESVNGLGANEPFTINAQTGAVVTNAKLDRETTAGYL 1223
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
S T T+ + V D ND P F++ + +V EG G V + ATD D G+NA + YS+
Sbjct: 697 SGTTTLQVNVLDCNDHTPTFEAEQFHATVREGVSVGSTVITIRATDQDIGKNAEIEYSIT 756
Query: 141 --------PEDI-PFVVDANTGDIRTNKALDYEKQQLY 169
P D F +DA +G I T ALD E +Y
Sbjct: 757 SITGERESPIDSQKFRIDARSGTISTRSALDREVSGMY 794
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 34/178 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP-- 75
+G +++V+A D D G + Y +L N D + +DP T E Q
Sbjct: 953 VGYNIVRVQAYDADEGANSEITYSIL--NRDDSMPLAVDPRTGWIHTTKGLDREEQSRYS 1010
Query: 76 ---IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDA 128
+ +GG+ S++ +V + + D+ND +P F YE + E Q G V V ATD
Sbjct: 1011 FQVVAVDGGIPPKSASTSVIVTIQDVNDNDPTFSPKYYEAMLAEDQPPGTPVTTVTATDP 1070
Query: 129 DEGQNAVVYYSVPEDIP---FVVDANTGD--IRTNKALDYEKQQLYLERVFLISKFAT 181
DE +A ++Y + F + + G I + LDY++ ER F ++ AT
Sbjct: 1071 DE--DARLHYEITAGNTRGRFAITSQNGRGLITIAQPLDYKQ-----ERRFALTITAT 1121
>gi|301788426|ref|XP_002929629.1| PREDICTED: protocadherin-11 X-linked-like, partial [Ailuropoda
melanoleuca]
Length = 1044
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 76/165 (46%), Gaps = 32/165 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G L ++ ATD DSG + Y L DA S FNLD H G +
Sbjct: 482 GTKLTKISATDSDSGHNAEINYLL---GIDAPSEFNLD---HHTGILTAVKKLDREKQEK 535
Query: 77 -------QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--QDGLAVGRVHA 125
+D G L + ATV + + D ND +P F Y F VPE + G VG +
Sbjct: 536 YSFTVLAKDNGMPSLMTNATVLVTILDQNDNSPIFTHNEYNFYVPENLPRHG-TVGLITV 594
Query: 126 TDADEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLY 169
TD D G+N+ V S+ + + F +D TG IR N + D EKQ+ Y
Sbjct: 595 TDPDYGENSAVTLSIFDVNDDFTIDPQTGVIRPNISFDREKQESY 639
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 20/161 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVE--------YRL---LDNN--TDAASYFNLDPATEHQGP 75
L + V TDKD+ G+V +RL N + A+Y + + E+
Sbjct: 376 LNTKIALVTVTDKDADNNGMVTCFTDHEVPFRLRPVFSNQFLLETAAYLDYESTREYAIK 435
Query: 76 I--QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
+ D G L+ ++ + ++V D ND P F S+PE G + ++ ATD+D
Sbjct: 436 LLAADAGKPPLNQSSMLLVKVKDENDNAPVFTQPFISLSLPENNSPGTKLTKISATDSDS 495
Query: 131 GQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
G NA + Y + D P F +D +TG + K LD EKQ+ Y
Sbjct: 496 GHNAEINYLLGIDAPSEFNLDHHTGILTAVKKLDREKQEKY 536
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 63/150 (42%), Gaps = 30/150 (20%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP---------------- 75
T+ + TD D G+ V + D N D F +DP T P
Sbjct: 588 TVGLITVTDPDYGENSAVTLSIFDVNDD----FTIDPQTGVIRPNISFDREKQESYTFYV 643
Query: 76 -IQDEGGLS--STATVNIRVTDINDKNPEF----QSLPYEFSVPEGQDGLAVGRVHATDA 128
+D G +S STA V I V D+ND P F + YE +P G V V A D
Sbjct: 644 KAEDGGKVSHSSTAKVTINVVDVNDNKPLFIAPSSNNSYELVLPSTNPGTVVFTVLAVDN 703
Query: 129 DEGQNAVVYYSVPEDIP---FVVDANTGDI 155
D G NA + YS+ E F++D TG+I
Sbjct: 704 DTGMNAELRYSIVEGNTKGLFIIDQTTGNI 733
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 78 DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
++GG SSTA + I V D ND +P F+ E ++PE G +V ++HATDAD G+N
Sbjct: 222 EDGGFPQRSSTAILQISVADTNDNSPVFKEDGIEVNLPENSPVGTSVTQLHATDADIGEN 281
Query: 134 AVVYYSVPEDIP------FVVDANTGDIRTNKALDYEK 165
A +++ I F ++ TG I + LD E+
Sbjct: 282 AKIHFYFSNLISNIAKRLFHLNTTTGLITIKQPLDREE 319
>gi|126290942|ref|XP_001377600.1| PREDICTED: protocadherin beta-3 [Monodelphis domestica]
Length = 796
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 26/174 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + + +G ++ V A D D+G +G + Y L ++ + + F ++P + G I+
Sbjct: 247 YEVQVPENNSIGFLVVTVSARDLDAGNYGEILYSLFHSSEEISKTFEINPIS---GDIRL 303
Query: 78 -------------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
D GGLS TV I+VTD+ND PE +PE +
Sbjct: 304 RKKLDFETIQRYEIDVEGTDGGGLSGKCTVIIQVTDLNDNAPELAMSSLTSPIPENAPEM 363
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIPFVVDA---NTGDIRTNKALDYEKQQLY 169
V +D D G+N + S+ EDIPF + N + T LD E + Y
Sbjct: 364 VVAVFSISDLDSGENGRLVCSIQEDIPFTLQPSIENFYTLITEGGLDRESKAQY 417
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
S TA V I V DIND P F YE VPE G V V A D D G + YS+
Sbjct: 223 SGTARVRIVVVDINDNAPLFVQPRYEVQVPENNSIGFLVVTVSARDLDAGNYGEILYSLF 282
Query: 141 --PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
E+I F ++ +GDIR K LD+E Q Y
Sbjct: 283 HSSEEISKTFEINPISGDIRLRKKLDFETIQRY 315
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 58/137 (42%), Gaps = 31/137 (22%)
Query: 64 FNLDPATEHQGPIQDEGGL--SSTATVNIRVT--------------------DINDKNPE 101
F L P+ E+ + EGGL S A NI +T D+ND P
Sbjct: 391 FTLQPSIENFYTLITEGGLDRESKAQYNIMITVMDLGFPRLQTVHNITVFISDVNDNPPV 450
Query: 102 FQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV----PEDIPF----VVDANT 152
F Y F + E + +G V A D D G NA V YS+ E++ ++++
Sbjct: 451 FTQTAYIFYLEENNTPASHLGNVSANDRDSGTNAKVTYSLQPSKSENLSLSSYISINSDN 510
Query: 153 GDIRTNKALDYEKQQLY 169
G + ++LDYE Q +
Sbjct: 511 GHLYALRSLDYEAIQTF 527
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 72/173 (41%), Gaps = 35/173 (20%)
Query: 33 LMQVKATDKDSGKFGLVEYRLL---DNNTDAASYFNLDPATEHQGPIQD----------- 78
L V A D+DSG V Y L N +SY +++ H ++
Sbjct: 470 LGNVSANDRDSGTNAKVTYSLQPSKSENLSLSSYISINSDNGHLYALRSLDYEAIQTFQF 529
Query: 79 -----EGG---LSSTATVNIRVTDINDKNP------EFQSLPYEFSVPE-GQDGLAVGRV 123
+GG LSS V + V D ND +P + + P VP + G V +V
Sbjct: 530 IVKATDGGSPALSSQTLVQVVVLDENDNSPFVLYPLQNGTAPCNDLVPRTAEPGYLVTKV 589
Query: 124 HATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKAL---DYEKQQLYL 170
A D D GQN+ + Y + + F + A+ G++ T + + D KQ+L +
Sbjct: 590 VAVDGDSGQNSWLSYQLLKATDPGLFTIWAHNGEVHTVRPISDRDAIKQRLLI 642
>gi|313220610|emb|CBY31457.1| unnamed protein product [Oikopleura dioica]
Length = 2507
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 86/179 (48%), Gaps = 34/179 (18%)
Query: 25 DKHELGVTLMQ----------VKATDKDSGKFGLVEYRLLDNNTDAASYFNLD------- 67
+K E+ VT+ + V A D D G+ G + Y+L + + A YF +D
Sbjct: 579 EKREIKVTIAEDSAVNSIITTVIAQDADEGRNGAISYQLSRVDPNEAGYFLIDTYDGTIR 638
Query: 68 ----------PATEHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
P E + +D G L + ATV I V D+ND P F+S + V E +
Sbjct: 639 LGKPLDRETTPCYELEIEARDHGTPSLYAKATVMITVLDVNDNAPHFESSKKRYYVREDK 698
Query: 116 D-GLAVGRVHATDADEGQNA-VVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D G + ++ A D D G NA + Y+ +P + F +D+ TG++ +ALD+EK++ Y
Sbjct: 699 DPGTIIAKIEADDRDIGDNANLEYFLLPNRETNNMFYLDSATGELELREALDFEKKRNY 757
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Query: 48 LVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPY 107
++ +R LD ASY A + Q PI S A V + + D ND P F
Sbjct: 213 IMTHRKLDRE-QIASYKFYVIAKDSQSPIH-----QSQAKVEVSILDDNDSPPVFAKDEL 266
Query: 108 EFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEK 165
E + EG G V V ATDADEG+N V Y++ D F VDA +GDI + LD+E
Sbjct: 267 EVHLSEGTKIGTKVISVKATDADEGENGKVTYALMNDKDTFAVDATSGDISLIRDLDFEV 326
Query: 166 QQLYLERV 173
+ + RV
Sbjct: 327 NRKFELRV 334
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 19/141 (13%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIND 97
A DK++G+ LV + LD L + Q D GGLS + + + D+ND
Sbjct: 414 AIDKNTGRITLV--KKLDRE--------LIDHYKFQVKATDGGGLSDIVDIVVNLIDVND 463
Query: 98 KNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV------PEDIP--FVV 148
P+F Y V E + G +G++ ATD+D G NA V Y++ PE++ F +
Sbjct: 464 SPPKFSQSSYSVKVAEDSRPGQIIGKIAATDSDSGDNARVSYTIGEGTIAPEEVNKLFKL 523
Query: 149 DANTGDIRTNKALDYEKQQLY 169
+ TG I + LD E+++ Y
Sbjct: 524 NEETGVISLAENLDNEQKKYY 544
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 72/157 (45%), Gaps = 20/157 (12%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNN----TDAASY---------FNLDPATEHQG 74
++G ++ VKATD D G+ G V Y L+++ DA S F ++ E +
Sbjct: 275 KIGTKVISVKATDADEGENGKVTYALMNDKDTFAVDATSGDISLIRDLDFEVNRKFELRV 334
Query: 75 PIQDEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE- 130
QD G S TV + + D+ND P F P V E + G V A+D D+
Sbjct: 335 RAQDHGRRRQESIVTVTVVIVDLNDNAPHFNINPLVARVKEDAKIGHTVTFAIASDKDDP 394
Query: 131 -GQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYE 164
N + Y++ P +PF +D NTG I K LD E
Sbjct: 395 NSPNGRLSYTLISPNLLPFAIDKNTGRITLVKKLDRE 431
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 63/168 (37%), Gaps = 28/168 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G + ++ ATD DSG V Y + + L E G I
Sbjct: 484 GQIIGKIAATDSDSGDNARVSYTIGEGTIAPEEVNKLFKLNEETGVISLAENLDNEQKKY 543
Query: 77 -------QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
+D G S A V I V D+ND P F+ + ++ E + V A
Sbjct: 544 YSFEIIAKDHGIPQKSDRAKVEINVMDVNDNPPVFEKREIKVTIAEDSAVNSIITTVIAQ 603
Query: 127 DADEGQNAVVYYSVPEDIP-----FVVDANTGDIRTNKALDYEKQQLY 169
DADEG+N + Y + P F++D G IR K LD E Y
Sbjct: 604 DADEGRNGAISYQLSRVDPNEAGYFLIDTYDGTIRLGKPLDRETTPCY 651
Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 44/98 (44%), Gaps = 12/98 (12%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPED----- 143
I V D+ND P F Y+F V E VG V TD D A + S+ E
Sbjct: 140 IHVNDVNDNEPVFGQTEYKFEVHESTPVRTIVGSVDVTDKDLMDQANLRLSLIEQGTKSR 199
Query: 144 ---IPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
F +D N G I T++ LD E+ Y + ++I+K
Sbjct: 200 KSPTDFTIDKN-GRIMTHRKLDREQIASY--KFYVIAK 234
>gi|281337635|gb|EFB13219.1| hypothetical protein PANDA_019861 [Ailuropoda melanoleuca]
Length = 1017
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 76/165 (46%), Gaps = 32/165 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G L ++ ATD DSG + Y L DA S FNLD H G +
Sbjct: 482 GTKLTKISATDSDSGHNAEINYLL---GIDAPSEFNLD---HHTGILTAVKKLDREKQEK 535
Query: 77 -------QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--QDGLAVGRVHA 125
+D G L + ATV + + D ND +P F Y F VPE + G VG +
Sbjct: 536 YSFTVLAKDNGMPSLMTNATVLVTILDQNDNSPIFTHNEYNFYVPENLPRHG-TVGLITV 594
Query: 126 TDADEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLY 169
TD D G+N+ V S+ + + F +D TG IR N + D EKQ+ Y
Sbjct: 595 TDPDYGENSAVTLSIFDVNDDFTIDPQTGVIRPNISFDREKQESY 639
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 20/161 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVE--------YRL---LDNN--TDAASYFNLDPATEHQGP 75
L + V TDKD+ G+V +RL N + A+Y + + E+
Sbjct: 376 LNTKIALVTVTDKDADNNGMVTCFTDHEVPFRLRPVFSNQFLLETAAYLDYESTREYAIK 435
Query: 76 I--QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
+ D G L+ ++ + ++V D ND P F S+PE G + ++ ATD+D
Sbjct: 436 LLAADAGKPPLNQSSMLLVKVKDENDNAPVFTQPFISLSLPENNSPGTKLTKISATDSDS 495
Query: 131 GQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
G NA + Y + D P F +D +TG + K LD EKQ+ Y
Sbjct: 496 GHNAEINYLLGIDAPSEFNLDHHTGILTAVKKLDREKQEKY 536
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 63/150 (42%), Gaps = 30/150 (20%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP---------------- 75
T+ + TD D G+ V + D N D F +DP T P
Sbjct: 588 TVGLITVTDPDYGENSAVTLSIFDVNDD----FTIDPQTGVIRPNISFDREKQESYTFYV 643
Query: 76 -IQDEGGLS--STATVNIRVTDINDKNPEF----QSLPYEFSVPEGQDGLAVGRVHATDA 128
+D G +S STA V I V D+ND P F + YE +P G V V A D
Sbjct: 644 KAEDGGKVSHSSTAKVTINVVDVNDNKPLFIAPSSNNSYELVLPSTNPGTVVFTVLAVDN 703
Query: 129 DEGQNAVVYYSVPEDIP---FVVDANTGDI 155
D G NA + YS+ E F++D TG+I
Sbjct: 704 DTGMNAELRYSIVEGNTKGLFIIDQTTGNI 733
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 78 DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
++GG SSTA + I V D ND +P F+ E ++PE G +V ++HATDAD G+N
Sbjct: 222 EDGGFPQRSSTAILQISVADTNDNSPVFKEDGIEVNLPENSPVGTSVTQLHATDADIGEN 281
Query: 134 AVVYYSVPEDIP------FVVDANTGDIRTNKALDYEK 165
A +++ I F ++ TG I + LD E+
Sbjct: 282 AKIHFYFSNLISNIAKRLFHLNTTTGLITIKQPLDREE 319
>gi|301613494|ref|XP_002936245.1| PREDICTED: protocadherin-11 X-linked-like [Xenopus (Silurana)
tropicalis]
Length = 1008
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 77/170 (45%), Gaps = 24/170 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G L ++ ATD DSG+ + Y L N A + FNLD T E Q
Sbjct: 480 GTELTKISATDADSGRNAELSYMLGPN---APTIFNLDRRTGILTAVRKLDREKQDRYTF 536
Query: 76 ---IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
+D G L + TV + V D ND +P F Y F VPE VG + TDAD
Sbjct: 537 TVIAKDNGNPSLQTNTTVTLSVLDQNDNSPSFTHNEYNFYVPENLPMYGTVGLITVTDAD 596
Query: 130 EGQNAVVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G+NAVV S V F++D TG IR N D E+Q Y +V + K
Sbjct: 597 SGENAVVTLSLVNARDNFIIDPLTGVIRPNITFDREQQGSYTFQVKALDK 646
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 7/90 (7%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVP 141
SSTA + + VTD+ND P F+ E ++PE G +V ++HATDAD G NA +++
Sbjct: 228 SSTAILQVTVTDVNDNRPVFKEKDIEVNIPEDAAVGTSVTQLHATDADLGSNAKIHFYFG 287
Query: 142 EDIP------FVVDANTGDIRTNKALDYEK 165
I F +D NTG I + LD E+
Sbjct: 288 NQITNLAKRHFAIDNNTGLITVKEPLDREE 317
Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+ +A + I++ D ND P F S E G + ++ ATDAD G+NA + Y +
Sbjct: 444 LNQSAMLLIKIKDENDNAPVFTLPMIGLSFVENNPPGTELTKISATDADSGRNAELSYML 503
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+ P F +D TG + + LD EKQ Y
Sbjct: 504 GPNAPTIFNLDRRTGILTAVRKLDREKQDRY 534
Score = 42.7 bits (99), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 56/132 (42%), Gaps = 27/132 (20%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ--- 77
T+ + TD DSG+ +V L++ A F +DP T E QG
Sbjct: 586 TVGLITVTDADSGENAVVTLSLVN----ARDNFIIDPLTGVIRPNITFDREQQGSYTFQV 641
Query: 78 ---DEGG--LSSTATVNIRVTDINDKNPEF----QSLPYEFSVPEGQDGLAVGRVHATDA 128
D+G SST V I V D+ND P F + Y+ G V RV+A D
Sbjct: 642 KALDKGSPQKSSTVKVTIFVEDVNDNKPVFVIPSNNYSYDLVQTSTSPGSVVARVYAIDN 701
Query: 129 DEGQNAVVYYSV 140
D G NA + YS+
Sbjct: 702 DTGINADLRYSI 713
Score = 35.4 bits (80), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 66/174 (37%), Gaps = 30/174 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-AASYFNLD----------PATEHQGPIQ 77
+G ++ Q+ ATD D G + + + T+ A +F +D P + P
Sbjct: 262 VGTSVTQLHATDADLGSNAKIHFYFGNQITNLAKRHFAIDNNTGLITVKEPLDREESPYH 321
Query: 78 -------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA--------VGR 122
D S ATV I +TDIND P + Y + G L+ +
Sbjct: 322 KLTVLASDGSSTPSRATVTINITDINDNIPSIDTR-YIINPVNGTVQLSEKAPLNTKIAL 380
Query: 123 VHATDADEGQNAVVYYSVPEDIPFVVDA---NTGDIRTNKALDYEKQQLYLERV 173
+ TD D N V D+PF + N + T LDYE + Y ++
Sbjct: 381 ITVTDKDADLNGKVTCFTDHDVPFRLKPVFDNQFLLETAAPLDYESTREYAIKI 434
>gi|260832660|ref|XP_002611275.1| hypothetical protein BRAFLDRAFT_120347 [Branchiostoma floridae]
gi|229296646|gb|EEN67285.1| hypothetical protein BRAFLDRAFT_120347 [Branchiostoma floridae]
Length = 2655
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 77/170 (45%), Gaps = 35/170 (20%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------------------- 68
+G +M V A D D G G V Y+++ N F LDP
Sbjct: 853 VGYHVMYVIAVDDDFGDNGRVTYQIVSGN--QGGKFLLDPNTGLLAIERRLDRETESRYV 910
Query: 69 ----ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRV 123
AT+H P + S++ + I V D+ND P F Y+ SV E Q G +V ++
Sbjct: 911 LNITATDHGTPSR-----SASHLITIHVRDVNDNQPRFLQDTYQASVSENQSPGTSVIQI 965
Query: 124 HATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYL 170
A DAD G N V+ Y++P + F ++ TG IRT LD E++ Y+
Sbjct: 966 TALDADAGTNGVLTYNIPRGVAEDRFTIEEQTGVIRTAFRLDREEKDSYI 1015
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 74/165 (44%), Gaps = 25/165 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNN--TDAASYFNLD----------PATEHQGPI- 76
G +++V A D D+G+ G + YRL+ + + FN+ P Q P
Sbjct: 531 GTEVIRVLADDPDNGENGTITYRLVTSTPGMNGEEMFNIHSQSGLITTNAPLDREQKPTY 590
Query: 77 -----QDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATD 127
+GG T V+I VTD ND P F + V EG + G +G VHA D
Sbjct: 591 VLSVAAVDGGTPPRERTTFVHIHVTDSNDNAPVFVNSTISIEVEEGLEAGSTIGSVHALD 650
Query: 128 ADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLY 169
DEG+N V Y + + F VD NTG I T K LD+E Y
Sbjct: 651 NDEGENGRVSYEIMQGNLYGTFGVDRNTGRIFTAKELDFELNARY 695
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 69/165 (41%), Gaps = 23/165 (13%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNN---------------TDAASYFNLDPATEH 72
E G T+ V A D D G+ G V Y ++ N T F L+
Sbjct: 638 EAGSTIGSVHALDNDEGENGRVSYEIMQGNLYGTFGVDRNTGRIFTAKELDFELNARYRL 697
Query: 73 QGPIQDEGGLS---STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
QD S ST VN+ V DIND P F+S P F + E V ATD
Sbjct: 698 IVQAQDNNARSQKSSTIYVNVNVIDINDNAPTFRSDPVMFGLQENTAVNSTVWTFSATDV 757
Query: 129 DEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D G+N V Y + + +P F +D+ TG ++T +D E+ +
Sbjct: 758 DSGRNGAVRYRIMDQLPNGNNFRIDSVTGALQTTTPIDREQTSQF 802
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 68/161 (42%), Gaps = 26/161 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEG------------ 80
+ V A D D G G V Y ++D N F +D T I D+
Sbjct: 1067 IHTVVAYDADIGTNGQVRYEIIDGN--VGGKFAVDAVTGELSVISDQALDRETVPLYHLI 1124
Query: 81 ---------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
+ST + + V+D ND NP F Y+ ++ E G V RV A D DE
Sbjct: 1125 VQAHDNTDAPRTSTTNITVAVSDENDNNPIFTDPSYQQTIQEDVSVGSTVIRVTAQDRDE 1184
Query: 131 GQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
G N V+Y + + F +D +G I T + LD EKQ +Y
Sbjct: 1185 GVNGEVFYFLSNETNGMFRIDNTSGIITTTRLLDREKQSVY 1225
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 74/173 (42%), Gaps = 22/173 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY-----------FNL 66
FY + + +QV A D+DSG + Y L N+ D+ ++ L
Sbjct: 309 FYDVQVPESASVNYRFLQVTALDRDSGLNEFITY-YLSNSADSPNFGMFPDGWLYVKHRL 367
Query: 67 DPATEH----QGPIQDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEG-QDGLA 119
D Q +D G AT N+RVT D ND +P F Y FS+ E G
Sbjct: 368 DRELRDSYFLQVVARDNGSPPRNATANVRVTVTDDNDNDPRFTQESYHFSLVENLPTGTT 427
Query: 120 VGRVHATDADEGQNAVVYYS-VPEDIPFVVDA--NTGDIRTNKALDYEKQQLY 169
VG V A DAD G N + +S +P + F++ G I+T + LD E Y
Sbjct: 428 VGTVFAVDADIGNNGDLDFSIIPNNSSFIITTGHQRGVIKTKRPLDRETTARY 480
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---P 141
ATV + + D ND P F Y SV EG D G+ V +V ATDAD G N+ V YS+
Sbjct: 1455 ATVWVNLRDENDNAPRFDQDRYTTSVWEGNDRGMFVIQVSATDADSGTNSEVQYSIVSGN 1514
Query: 142 EDIPFVVDANTGDIRTNKALDYEKQQLY 169
D FV+D + G I TN +D E + Y
Sbjct: 1515 HDNAFVIDRDRGIISTNVRMDREVRDSY 1542
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 79/188 (42%), Gaps = 33/188 (17%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------A 61
+S Y A ++ +G +++V A D DSG + Y + N D+ A
Sbjct: 1898 NSTQYVAQISEEAVIGAFVVRVFAFDADSGPNADIHYEITSGNDDSLFAINSQSGVITVA 1957
Query: 62 SYFNLDPATEHQGPIQ-----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ + D +H I+ +G + +V I + D ND P+F L Y VPEG+
Sbjct: 1958 NPLDYDTVAQHNLTIRAKDSTSDGAKHTITSVLINLIDENDNPPDFPVLMYLEDVPEGRP 2017
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV---------PEDIP-----FVVDANTGDIRTNKAL 161
G V A D D G + Y + D+ F +D++TG++RT +
Sbjct: 2018 VGTLVFTAEARDKDAGIYGTLSYVILDRDVTNDGTSDVAQGKDAFEIDSSTGEVRTREVF 2077
Query: 162 DYEKQQLY 169
DYE Q Y
Sbjct: 2078 DYETQNTY 2085
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 75/182 (41%), Gaps = 28/182 (15%)
Query: 14 SDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-----NN----------- 57
SD + +G ++ + T+ ATD DSG+ G V YR++D NN
Sbjct: 732 SDPVMFGL--QENTAVNSTVWTFSATDVDSGRNGAVRYRIMDQLPNGNNFRIDSVTGALQ 789
Query: 58 ------TDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
+ S F L Q P+ + T T I V D+ND P F S + +
Sbjct: 790 TTTPIDREQTSQFTLVVEATDQ-PVNLSHARTKTTTARILVEDVNDNTPVFVSRTETYVM 848
Query: 112 PEGQDGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQL 168
+ G V V A D D G N V Y + + F++D NTG + + LD E +
Sbjct: 849 EDEPVGYHVMYVIAVDDDFGDNGRVTYQIVSGNQGGKFLLDPNTGLLAIERRLDRETESR 908
Query: 169 YL 170
Y+
Sbjct: 909 YV 910
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 65/142 (45%), Gaps = 27/142 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNN------TDAAS---YFNLDPAT--------- 70
+G + +A DKD+G +G + Y +LD + +D A F +D +T
Sbjct: 2018 VGTLVFTAEARDKDAGIYGTLSYVILDRDVTNDGTSDVAQGKDAFEIDSSTGEVRTREVF 2077
Query: 71 --EHQGP------IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
E Q D GGLS+ V + + +++ P F Y F+V D G VG
Sbjct: 2078 DYETQNTYGFYIRATDTGGLSTDVQVGVSIQSVDEFPPVFTQDNYIFTVIANADVGTFVG 2137
Query: 122 RVHATDADEGQNAVVYYSVPED 143
+V ATDAD G + +V YS+ D
Sbjct: 2138 QVEATDADGGPDGIVSYSIRND 2159
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 75/177 (42%), Gaps = 29/177 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDAA-SYFNLD 67
Y A + G +++Q+ A D D+G G++ Y + ++ T + F LD
Sbjct: 948 YQASVSENQSPGTSVIQITALDADAGTNGVLTYNIPRGVAEDRFTIEEQTGVIRTAFRLD 1007
Query: 68 ---------PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
A G G +S V + V D ND P F+ Y +VPE Q
Sbjct: 1008 REEKDSYIVTAYARDGAYPSRFGFTS---VVVSVLDTNDHAPVFKDAEYMMTVPENQPNY 1064
Query: 119 AV-GRVHATDADEGQNAVVYYSVPEDI---PFVVDANTGDIR--TNKALDYEKQQLY 169
V V A DAD G N V Y + + F VDA TG++ +++ALD E LY
Sbjct: 1065 GVIHTVVAYDADIGTNGQVRYEIIDGNVGGKFAVDAVTGELSVISDQALDRETVPLY 1121
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 77/176 (43%), Gaps = 38/176 (21%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG--------------- 74
G T+ V A D D G G +++ ++ NN S F + T HQ
Sbjct: 425 GTTVGTVFAVDADIGNNGDLDFSIIPNN----SSFII--TTGHQRGVIKTKRPLDRETTA 478
Query: 75 ------PIQDEGG--LSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQ-DGLAVGRVH 124
++D G ++TAT++I V D+ND P F S Y V E Q +G V RV
Sbjct: 479 RYDLVLKVRDRGTPPRTATATLHIVVEDMNDNAPYFSHSGQYLGEVEEHQPNGTEVIRVL 538
Query: 125 ATDADEGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYEKQQLYLERV 173
A D D G+N + Y + P F + + +G I TN LD E++ Y+ V
Sbjct: 539 ADDPDNGENGTITYRLVTSTPGMNGEEMFNIHSQSGLITTNAPLDREQKPTYVLSV 594
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 23/152 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------EHQG------PI 76
T+ V A+ D GK + Y + ++ D YF +DP T +H+ I
Sbjct: 113 TVGTVMASHSDPGKTDPITYSI--HSGDRQGYFAIDPTTGRIYTQLNLDHETVSSLLLNI 170
Query: 77 QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQ 132
Q G + A VNI + DIND PEF ++ E G + A D D G
Sbjct: 171 QASSGNPPVYGRAQVNITILDINDNRPEFTVATESVAITENVSPGTIIFVASAQDQDAGS 230
Query: 133 NAVVYYSV--PEDIPFVVDANTGDIRTNKALD 162
N +V YS+ +D F V++ +G+++ +++D
Sbjct: 231 NGLVRYSLLNNQDNLFSVNSISGEVKILRSVD 262
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 30/144 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEY----------------------RLLDN 56
Y ++ +G T+++V A D+D G G V Y RLLD
Sbjct: 1160 YQQTIQEDVSVGSTVIRVTAQDRDEGVNGEVFYFLSNETNGMFRIDNTSGIITTTRLLDR 1219
Query: 57 NTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ S ++ D +GP G +S V + ++D+ND P F +P+E ++ E
Sbjct: 1220 --EKQSVYSFDAYASDRGPF---GPRTSNVRVTVDISDVNDNAPVFTQVPFETTI-ERNI 1273
Query: 117 GL--AVGRVHATDADEGQNAVVYY 138
G+ V V A D D G NA + Y
Sbjct: 1274 GVNQQVVTVTAEDKDTGSNAEILY 1297
Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 72/174 (41%), Gaps = 24/174 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + ++ G+ ++QV ATD DSG V+Y ++ N D A + D
Sbjct: 1476 YTTSVWEGNDRGMFVIQVSATDADSGTNSEVQYSIVSGNHDNAFVIDRDRGIISTNVRMD 1535
Query: 71 ---------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPY-EFSVPEGQD-GLA 119
E + + L+ +AT+ I V DIND P F PY +V EG + G
Sbjct: 1536 REVRDSYRLELRAVDKGTPRLTGSATLRISVVDINDNRPTFPE-PYPPVNVLEGAEVGSE 1594
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYL 170
+ V A D D + Y P F +D +G + + LD E Q Y+
Sbjct: 1595 LALVTANDIDTDP-TITYTFTTHGNPGGVFSIDRYSGKVTLAQPLDRESVQSYI 1647
Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 78 DEGGLSSTATVNIRVTDIN--DKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNA 134
D GGL S N+ V+ I + P F Y FSVPE VG V A+ +D G+
Sbjct: 69 DGGGLVSQVNANVAVSVIGTGEMPPVFSQARYSFSVPEDAARQHTVGTVMASHSDPGKTD 128
Query: 135 VVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
+ YS+ F +D TG I T LD+E
Sbjct: 129 PITYSIHSGDRQGYFAIDPTTGRIYTQLNLDHE 161
Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYS--VPEDI 144
V I V D ND P F Y+ + E +V V ATD D G NA + YS V
Sbjct: 1663 VEINVLDENDNPPVFDQQTYQVDIAEMVPPHYSVATVTATDRDAGSNAEITYSMTVAPVE 1722
Query: 145 PFVVDANTGDIRTNKALDYEKQQLYLERVF 174
F VD G I TNK ++ + Q ++ V
Sbjct: 1723 GFYVDPRNGTIFTNKTIEINRMQSTIQLVI 1752
>gi|241811212|ref|XP_002414573.1| cadherin-repeats domain-containing protein [Ixodes scapularis]
gi|215508784|gb|EEC18238.1| cadherin-repeats domain-containing protein [Ixodes scapularis]
Length = 2790
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 20/163 (12%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDNNTDAA----------SYFNLDPATEHQGP---IQ 77
VT+ ++A D+DSG+ + Y +L ++ + A + +LD E + I
Sbjct: 365 VTVGTIRAIDRDSGRNAAIRYTILGDHANNALLVDEGGNIVTKRSLDRERESKLEFLVIA 424
Query: 78 DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
+GG LS T TV ++V DIND P F+ + +VPE +D L V + A D D G N
Sbjct: 425 FDGGIPQLSGTTTVAVQVEDINDNPPYFEGDTFFVNVPEEKDPPLEVFTLQAKDVDSGDN 484
Query: 134 AVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
AV+ Y + +D F ++ +TG + T+K L+YE Q Y +V
Sbjct: 485 AVMKYRIIGGNDDAVFGINEDTGVVTTSKRLNYETQAEYALQV 527
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 37/181 (20%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL---------------------- 53
++ G + LGV ++A D D GK G V+Y +
Sbjct: 2126 TILEGNYKEQRSRLGV----LRAVDDDRGKNGAVDYAIISRKDQNLPFHVDVHTGELFAT 2181
Query: 54 --LDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
LD T YF++ A ++ P Q+ ST V + + D ND+ P F + PY +
Sbjct: 2182 GVLDRETKFNYYFHV-LALDNGDPPQN-----STVNVTVTIEDANDEKPRFFTDPYLAQI 2235
Query: 112 PEGQD-GLAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQL 168
PE D G V ++ A D D G+N +V+Y + D F +D+ G + T LD+EKQ+
Sbjct: 2236 PENLDPGQKVTQIRAFDPDTGENGLVFYKLGGGHDNKFYIDSKDGTVWTLSKLDFEKQEF 2295
Query: 169 Y 169
Y
Sbjct: 2296 Y 2296
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG---QDGLAVGRVHATDADEGQNA 134
D GL++ VNI V D+ND P F Y F++ EG + +G + A D D G+N
Sbjct: 2094 DGRGLANLIVVNITVLDVNDHKPTFVKPEYSFTILEGNYKEQRSRLGVLRAVDDDRGKNG 2153
Query: 135 VVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
V Y++ +++PF VD +TG++ LD E + Y V +
Sbjct: 2154 AVDYAIISRKDQNLPFHVDVHTGELFATGVLDRETKFNYYFHVLAL 2199
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 65/144 (45%), Gaps = 27/144 (18%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG-PI-----------------Q 77
+ A DKDSG +V Y L + +D S + G P+ +
Sbjct: 1933 IMAIDKDSGNNSVVHYSLGGSGSDLFSILDSGVVIFSGGNPVSVLDRELADRYELLVTAR 1992
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE-GQNAV 135
D G LSST + I+V D ND P FQ P +PE + G V +V A DADE G N+
Sbjct: 1993 DLGNLSSTTYLTIKVEDENDNAPSFQHGPLRVLLPETARPGARVAQVSAIDADEKGPNSK 2052
Query: 136 VYYSVPEDIPFVVDANTGDIRTNK 159
V YS +V + G++R ++
Sbjct: 2053 VEYS-------IVSGSRGNVRIDR 2069
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 24/179 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y A + G + QV A D D+ + Y ++ N D + N G + D
Sbjct: 253 YEAQVGESLPAGALVTQVSAKDLDANT--ALTYSIIAGNDDETFHMNPFTGVITSGTVLD 310
Query: 79 --------------EGGLSSTATVNIRVTDINDKNPEFQSLPYEFS-VPEGQDGLAVGRV 123
+G ++ + + + V DIND+ P F Y FS V E + + VG +
Sbjct: 311 FEKKQSYDLLVQVSDGFNTAVSPLTVHVVDINDQQPVFTHNYYNFSVVEEMTENVTVGTI 370
Query: 124 HATDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLYLERVFLISKF 179
A D D G+NA + Y++ D +VD G+I T ++LD E++ LE FL+ F
Sbjct: 371 RAIDRDSGRNAAIRYTILGDHANNALLVDEG-GNIVTKRSLDRERES-KLE--FLVIAF 425
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 69/166 (41%), Gaps = 28/166 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD-----------------PATEH 72
G T+ + A D+D G + Y ++D N + F++D PA
Sbjct: 1613 GQTVTHLMAADRDGLDLGKIRYYIIDGN--SGEEFSMDETSGIISVRLIPDREKTPAFML 1670
Query: 73 QGPIQDEGG-----LSSTATVNIRVTDINDKNPEFQSLP-YEFSVPEGQDGLAVGRVHAT 126
+ D L ++ V I + D+ND P+F+ YEF G V V AT
Sbjct: 1671 KVLAVDSANNTVSCLLVSSQVAIVIQDVNDSPPQFEKEAYYEFVSENAPVGTIVDTVKAT 1730
Query: 127 DADEGQNAVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D D QN + YS + +PF++D G + +ALD + Q Y
Sbjct: 1731 DPDSPQNTNMTYSFARLSRRVPFMIDPILGTVNITRALDISESQEY 1776
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV 140
L + V I V D ND P F Y S+PE G + A+ D + V Y +
Sbjct: 959 LFGLSMVTIDVLDSNDHAPTFSKTAYSASLPENLPSGHCFLSIQASSGD-SVDQVTYEIL 1017
Query: 141 PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+DIPF V+ TGD+ T++ LD E++ Y
Sbjct: 1018 NKDIPFTVNGRTGDVCTSQVLDRERRDSY 1046
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 69/170 (40%), Gaps = 27/170 (15%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGPI----- 76
D++ V L+QV A+D D G G V YR+ F +D T P+
Sbjct: 1192 DENAANVPLVQVHASDPDEGSAGKVVYRIA--RATKRETFRIDSQTGKITLVSPLDYEQI 1249
Query: 77 ---------QDEGGLSSTAT--VNIRVTDINDKNPEFQSLPYEFSVPE--GQDGLAVGRV 123
+D+ AT V + V D+ND PEF S+P +PE Q+ L V RV
Sbjct: 1250 KHLEVFVEARDDANEPQFATTIVQVTVNDVNDNAPEFLSMPRLLRIPESTSQNEL-VYRV 1308
Query: 124 HATDADE---GQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
A D D G N + + P F + TG + + L + L +
Sbjct: 1309 QAIDLDSPAGGNNDIKFELNPPSTRFSIHPKTGQVFATQPLQLGTESLRI 1358
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 66/156 (42%), Gaps = 32/156 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNN-----TDAASYFNL-DPA-------------- 69
G T++QV A D+DSG Y L+D+ + + + DPA
Sbjct: 42 GFTVVQVHAVDRDSGDNADFLYHLIDDTGGFTIDEKEGWIRVRDPAKLDREKVDKLTMRV 101
Query: 70 -TEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLP---YEFSVPEGQ-DGLAVGRVH 124
+ P + +STA V + + D ND NP+F LP Y FSV E G +G V
Sbjct: 102 LALERKPNVNPDAKASTAVVEVSLLDANDNNPQF--LPEGVYIFSVTETDPPGTVIGSVV 159
Query: 125 ATDADEGQNAVVYYSVPED-----IPFVVDANTGDI 155
A D D G+N V + D +PF V G +
Sbjct: 160 AVDPDMGENGRVVFFKQNDTLSYSVPFGVHPFNGSV 195
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNAVVY 137
+G A V+I V D ND P F+ Y S+P + Q G +V ++HA D D N +
Sbjct: 1054 DGKFDMKAPVSIEVVDENDNPPRFEKERYSVSIPHDSQAGRSVIQLHAIDLDVANNGEIT 1113
Query: 138 YSVPEDIP-FVVDANTGDIRTNKAL 161
Y + F +DA TG +R L
Sbjct: 1114 YWIKNTHGIFEIDAKTGLVRMAAGL 1138
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 43/97 (44%), Gaps = 4/97 (4%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPEDI 144
A V + V DIND P F Y +V E G V +VHA D D G NA Y + +D
Sbjct: 10 AKVEVSVMDINDNVPVFDYDMYNITVMENLPPGFTVVQVHAVDRDSGDNADFLYHLIDDT 69
Query: 145 -PFVVDANTGDIRTN--KALDYEKQQLYLERVFLISK 178
F +D G IR LD EK RV + +
Sbjct: 70 GGFTIDEKEGWIRVRDPAKLDREKVDKLTMRVLALER 106
Score = 42.7 bits (99), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVP 141
+ +A++ I V +IN+ +PEF PY F V E G +VG++ ATD D N +VY
Sbjct: 752 TGSASIIISVQNINEFSPEFVGYPYNFYVAENAARGTSVGQIQATDKD--GNKIVYAISD 809
Query: 142 EDIP-FVVDANTGDIRTNKALD 162
D F ++++TG + K L+
Sbjct: 810 GDAEYFGIESDTGKLYVKKNLE 831
Score = 42.7 bits (99), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 15/169 (8%)
Query: 29 LGVTLMQVKATDKDSGK-------FGLVEYRL------LDNNTDAASYFNLDPATEHQGP 75
+G + VKATD DS + F + R+ + + ++ + E+
Sbjct: 1720 VGTIVDTVKATDPDSPQNTNMTYSFARLSRRVPFMIDPILGTVNITRALDISESQEYSLE 1779
Query: 76 IQDEGGLSSTAT-VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
+Q GL T T + I V++ +++P F L Y+F V E G VG+V N+
Sbjct: 1780 VQANDGLWKTTTAMKIYVSEAEERDPRFDQLHYKFKVLENVPGAVVGQVELQSRTLRVNS 1839
Query: 135 VVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATS 182
+ YS+ D+ + I T LD EK+ Y V L K T+
Sbjct: 1840 QMRYSIINTDVRPYFNITKAKIFTKVGLDREKRSRYTFTVMLEEKRPTT 1888
Score = 42.4 bits (98), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 77 QDEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
QD G S+ + ++V+ ++ P F Y V E + + +VHA+D DEG
Sbjct: 1155 QDHGAASNIGKTSLVVKVSSTHNNPPVFDRFAYSVYVDENAANVPLVQVHASDPDEGSAG 1214
Query: 135 VVYYSVPEDIP---FVVDANTGDIRTNKALDYEK 165
V Y + F +D+ TG I LDYE+
Sbjct: 1215 KVVYRIARATKRETFRIDSQTGKITLVSPLDYEQ 1248
Score = 42.4 bits (98), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 30/162 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---LDN-----------------NTDAASYFNLDPA 69
G + Q++A D D+G+ GLV Y+L DN + + ++N+
Sbjct: 2242 GQKVTQIRAFDPDTGENGLVFYKLGGGHDNKFYIDSKDGTVWTLSKLDFEKQEFYNMTVI 2301
Query: 70 TEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR-VHATDA 128
QG + +S+ A + + VTD ND PEF Y V E VG V+ DA
Sbjct: 2302 AYDQG----KPSMSAMAKLWVTVTDRNDVVPEFPKSVYTLEVAENT---RVGDVVYTLDA 2354
Query: 129 DEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLY 169
G N + P+++ F V+ + G+IR KALD Q Y
Sbjct: 2355 GPG-NFLYTLDNPQEVDTFSVEPHNGEIRLAKALDSIHQSHY 2395
Score = 42.4 bits (98), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 23/162 (14%)
Query: 30 GVTLMQVKATDKDSGKF------GLVEYRLLDNNTDAASYF--NLDPATEHQGPIQ-DEG 80
G ++ Q++ATDKD K G EY ++++T Y NL+ T + + +
Sbjct: 787 GTSVGQIQATDKDGNKIVYAISDGDAEYFGIESDT-GKLYVKKNLESRTSYTIVVTATDN 845
Query: 81 GLSSTATVNIRVT----DINDKNPEFQSLPYEFSVPE--GQDGLAVGRVHATDADEGQNA 134
G+ T+ ++VT ++N+ P F Y+ +V E D + + ++ ATD D N
Sbjct: 846 GVPENRTLGVQVTVFVKEVNNYPPVFSHSSYKGTVLEKYATDRVII-KLFATDKDLQNNT 904
Query: 135 VVY--YSVPEDIPFVVDANTGDIRTN----KALDYEKQQLYL 170
+ Y S ++ FV+D TGDIR N LDY++++ ++
Sbjct: 905 ITYNITSGNDEGIFVIDHETGDIRVNPETINLLDYDRKKQFV 946
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 69 ATEHQGPIQDEGGLS-STATVNIRVTDINDKNPEF--QSLPYEFSVP-EGQDGLAVGRVH 124
A ++ P +D ++ A V + V D ND +P F Q P +VP E G V ++H
Sbjct: 2518 AKRNKKPEEDTAHVAFDEALVVVNVGDENDNSPVFDHQGKPIVAAVPLEASFGYQVTKLH 2577
Query: 125 ATDADEGQNAVVYYSV---PEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
A DAD G N + Y + ED F +D TG +R+ + ++Y
Sbjct: 2578 ARDADTGFNGAIRYEIIQKAEDASSKFQIDPVTGVVRSVVTFSLDGGKMY 2627
>gi|395504706|ref|XP_003756688.1| PREDICTED: protocadherin beta-2-like [Sarcophilus harrisii]
Length = 788
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL---------- 66
L Y + +G ++ V ATD D+G +G + Y L + + F+L
Sbjct: 245 LRYEVQIPENSSIGSKIVTVSATDLDAGNYGEISYAFLHASENTRKLFHLKRELGELYLR 304
Query: 67 -----DPATEHQGPIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
+ A + IQ D GGLS+ TV I+V D+ND PE + +PE
Sbjct: 305 EKVDFESAQSYTINIQAVDGGGLSAECTVIIQVIDLNDNPPEVTISSFTSPIPENSPETV 364
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
V +D D G+N + S+ +D+PFV+ + + + T ALD E + Y
Sbjct: 365 VAVFSVSDLDSGENGKIVCSIQDDLPFVLKPSIENFYTLVTEGALDREYKAEY 417
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L S + + ++D+ND P F Y+ + E L +G V A+D D G NA V YS+
Sbjct: 431 LKSEYNLTVLISDVNDNPPMFSERTYKVCLQENNSPALHIGSVSASDRDSGINAKVTYSL 490
Query: 141 ----PEDIPFV----VDANTGDIRTNKALDYEKQQLY 169
P+D+P ++++ G + ++LDYE Q +
Sbjct: 491 LPPEPDDLPLFSYISINSDNGYLYALRSLDYEAIQAF 527
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Query: 79 EGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNA 134
+GG+ S TA V I V DIND P F L YE +PE G + V ATD D G
Sbjct: 216 DGGVPPRSGTAQVRILVVDINDNAPVFAQLRYEVQIPENSSIGSKIVTVSATDLDAGNYG 275
Query: 135 VVYYS---VPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+ Y+ E+ F + G++ + +D+E Q Y
Sbjct: 276 EISYAFLHASENTRKLFHLKRELGELYLREKVDFESAQSY 315
Score = 35.8 bits (81), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 76/187 (40%), Gaps = 35/187 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG---- 74
Y ++ + + + V A+D+DSG V Y LL D F+ G
Sbjct: 456 YKVCLQENNSPALHIGSVSASDRDSGINAKVTYSLLPPEPDDLPLFSYISINSDNGYLYA 515
Query: 75 -------PIQ--------DEGG---LSSTATVNIRVTDINDKNP------EFQSLPYEFS 110
IQ +GG LSS V I V D ND +P + + P
Sbjct: 516 LRSLDYEAIQAFQFTVRAADGGSPSLSSQVLVQIVVQDENDNSPFVLYPLQNGTAPCNDL 575
Query: 111 VPE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKAL---DY 163
VP + G V +V A D D GQN+ + Y + + F + A+ G++ T +++ D
Sbjct: 576 VPRTAEPGYLVTKVVAVDRDWGQNSWLSYQLLKTTDPGLFTLWAHNGEVHTARSISDRDA 635
Query: 164 EKQQLYL 170
KQ+L +
Sbjct: 636 IKQRLVV 642
>gi|348566837|ref|XP_003469208.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1-like [Cavia
porcellus]
Length = 4579
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 79/151 (52%), Gaps = 22/151 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI------ 76
+++VKATD+DSG +G + Y ++++ Y N LD T + I
Sbjct: 2512 VIEVKATDRDSGIYGHITYNIVNDFAKDRFYPNERGQIFTLEKLDRETPAEKVISIRLMA 2571
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEGQNAV 135
+D GG + T+N+ +TD ND P+F++ YE ++ G +V +V A+DADEG NA
Sbjct: 2572 KDAGGKVAFCTINVILTDDNDNAPQFRATKYEVNIGSNAAKGTSVIKVFASDADEGSNAD 2631
Query: 136 VYYSVPEDIPFV-----VDANTGDIRTNKAL 161
V Y++ D V ++ TG I T ++L
Sbjct: 2632 VIYAIEADSESVKENLEINKLTGVITTKESL 2662
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 75/160 (46%), Gaps = 23/160 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG---- 74
G +MQV ATD D + Y LL + A F L+P T E Q
Sbjct: 3040 GKLIMQVSATDADIRSNAEITYTLLGS---GAEKFRLNPDTGELKTLAPLDREEQAVYNL 3096
Query: 75 --PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D GG A++ + + D+ND PEF + PY +V E + G + RV ATDAD G
Sbjct: 3097 LVKATDGGGRFCQASIVLTLEDVNDNAPEFTADPYTITVFENTEPGTLLTRVQATDADTG 3156
Query: 132 QNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
N + YS+ + F ++ +G I+ K LD E+Q +Y
Sbjct: 3157 LNRKISYSLIDSANGQFSINDISGIIQLEKPLDREQQAVY 3196
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 87/176 (49%), Gaps = 29/176 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
++ ++ DK E+ ++QV+ATDKD G G V Y +L +TD F++D T
Sbjct: 828 YFVEVSEDK-EINSEIIQVEATDKDLGSNGHVTYSIL-TDTDK---FSIDSITGVVKVVH 882
Query: 71 --------------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
E + ++E L ST + + + D+ND P+F Y V E
Sbjct: 883 PLDREVQHVHYLKIEARDQAKEELQLFSTVLLKVSLEDVNDNPPKFIPPNYRVKVREDLP 942
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
+G + + A D D GQ++ V YS+ + + F VD +G +R + LD+E++Q+Y
Sbjct: 943 EGTIIMWLEAYDPDVGQSSQVRYSLLDHGEGNFDVDKLSGAVRIVQQLDFERKQVY 998
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 82/183 (44%), Gaps = 23/183 (12%)
Query: 8 SALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD 67
+A E T+D Y + E G L +V+ATD D+G + Y L+D+ S ++
Sbjct: 3122 NAPEFTADP--YTITVFENTEPGTLLTRVQATDADTGLNRKISYSLIDSANGQFSINDIS 3179
Query: 68 PATEHQGPIQ--------------DEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFS 110
+ + P+ D+G LS+T TV + V DIND P F+ Y +
Sbjct: 3180 GIIQLEKPLDREQQAVYTLTLKAVDQGLPRRLSATGTVIVSVLDINDNPPVFEYREYGAT 3239
Query: 111 VPEG-QDGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQ 166
V E G V +++A D NA + YS+ E F +DA TG I + LDYE
Sbjct: 3240 VSEDVLIGTEVLQLYAASRDIEANAEITYSIISGNEHGKFSIDAKTGAIFIIENLDYESA 3299
Query: 167 QLY 169
Y
Sbjct: 3300 HEY 3302
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 72/141 (51%), Gaps = 14/141 (9%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKN 99
D+ SG+ L + LD+ T F++ QD+ + ++ V+I+V D ND +
Sbjct: 2755 DRQSGRLKL--EKSLDHETTKWYQFSILARC-----TQDDYEVVASVDVSIQVKDANDNS 2807
Query: 100 PEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE----DI--PFVVDANT 152
P +S PYE F V G V ++ A+D D G N V YS+ + DI F ++A T
Sbjct: 2808 PVLESNPYEAFIVENLPGGSRVIQIRASDLDSGLNGHVMYSLDQSQSVDIIESFAINAET 2867
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G I T K LD+E++ Y +V
Sbjct: 2868 GWITTLKELDHEERDNYQIKV 2888
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 25/169 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--------TDAASYF---NLD 67
YGA + +G ++Q+ A +D + Y ++ N + F NLD
Sbjct: 3236 YGATVSEDVLIGTEVLQLYAASRDIEANAEITYSIISGNEHGKFSIDAKTGAIFIIENLD 3295
Query: 68 PATEHQGPIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--- 118
+ H+ + E GG LS TVNI VTDIND P F Y + E D +
Sbjct: 3296 YESAHEYYLTVEATDGGTPSLSDVVTVNINVTDINDNTPAFSQDTYTAVISE--DAVLEQ 3353
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYE 164
+V V A DAD ++++YS+ E PF +D G+++ K LD E
Sbjct: 3354 SVITVMADDADGPLYSLIHYSIIEGNQGGPFTIDPVKGEVKVTKLLDRE 3402
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 23/160 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV+ATD DS + Y++ N++ + +F++D T
Sbjct: 2289 YSATLSEASVIGTSVVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHIDSTTGLISLLRT 2348
Query: 71 -------EHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
+H+ ++ +GG LSS V + VTD+ND P F YE + E G
Sbjct: 2349 LDYEQFQQHKIFVRAIDGGMPPLSSDVIVTVDVTDLNDNPPLFDQQIYEAKISEHAIHGH 2408
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
V V A DAD + YS+ + FV+D+ TG I
Sbjct: 2409 FVTCVKAYDADSSDIDRLEYSILSGNDHKNFVIDSETGII 2448
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 73/162 (45%), Gaps = 28/162 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASY--FNLDPATE-------------HQGPI- 76
++Q++A DKD K L+ L ++ D S F LDPAT HQ +
Sbjct: 1476 ILQIRAVDKDE-KNKLI--YTLQSSIDPLSLKKFRLDPATGSLSTCEKLDHEAVHQHILT 1532
Query: 77 -----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
QD + A + + V+D ND P F S YE V E G V +V A D D+
Sbjct: 1533 VMVRDQDVPVKRNFARIIVNVSDTNDHAPWFTSSSYEGRVYESAAVGSVVLQVTALDKDK 1592
Query: 131 GQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
G+NA V YS+ F +D G I+T K LD Q+ Y
Sbjct: 1593 GKNAEVVYSIESGNIGNSFTIDPILGSIKTAKELDRSHQEEY 1634
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 7/107 (6%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYY 138
G ++ V ++V N PEF Y S E G V RV A D D+G+N V Y
Sbjct: 442 GDRKASTKVLVKVLSANSNPPEFTQTAYRASFDENALIGTTVLRVSAVDPDDGENGYVTY 501
Query: 139 SVP--EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSY 183
S+ +PFV++ TG + T++ LDYE + RV+ + A+ +
Sbjct: 502 SIANVNPVPFVINHFTGAVSTSENLDYE----LMPRVYTLRIRASDW 544
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 59/144 (40%), Gaps = 2/144 (1%)
Query: 37 KATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIN 96
KA + G F + R NT + D T ++ + V ++V D N
Sbjct: 85 KAEEYILGDFCFLRIRTKGGNTAILNREVKDHYTLIVKAVEKNTNAEARTKVRVQVLDTN 144
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGD 154
D P F Y S+PE ++ +V ATDAD G N YYS + F + +G
Sbjct: 145 DLRPLFSPTSYSVSLPENTAIRTSIAKVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGA 204
Query: 155 IRTNKALDYEKQQLYLERVFLISK 178
+ LDY + QLY + + +
Sbjct: 205 VVLTGRLDYMETQLYELEILAVDR 228
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVY 137
+G SS A V ++V D ND +P + Y ++PE G + +V ATDAD NA +
Sbjct: 3001 DGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPEDALPGKLIMQVSATDADIRSNAEIT 3060
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ F ++ +TG+++T LD E+Q +Y
Sbjct: 3061 YTLLGSGAEKFRLNPDTGELKTLAPLDREEQAVY 3094
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 19/173 (10%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQGPIQD 78
G ++ +G ++ + ATD DSG G + Y + N D+ +++ + P+
Sbjct: 724 GIEVKENQPVGSNVIFMNATDLDSGFNGKLVYAISGGNEDSCFIIDMETGMLKILSPLDR 783
Query: 79 EG-------------GLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
E G+ A ++I + D ND PEF Y V E ++ +
Sbjct: 784 ETTDKYTLNMTVYDLGIPQKAAWRLLDIVILDANDNPPEFLQESYFVEVSEDKEINSEII 843
Query: 122 RVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYLERV 173
+V ATD D G N V YS+ D F +D+ TG ++ LD E Q ++ ++
Sbjct: 844 QVEATDKDLGSNGHVTYSILTDTDKFSIDSITGVVKVVHPLDREVQHVHYLKI 896
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 34/178 (19%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
+L Y A+ + E+G + V A D+DSG+ G V Y L +++ +F + PA E
Sbjct: 2084 NLPYYAVVKVDTEVGHVIRYVTAVDRDSGRNGEVHYYLKEHH----DHFQIGPAGEISLK 2139
Query: 76 IQ-----------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
Q D G + +A V + +T +N P F+ Y +PE
Sbjct: 2140 KQFELDTLNKEYLVTVVAKDGGNPAFSAEVIVPITVMNKAMPVFEKPFYSAEIPENI--- 2196
Query: 119 AVGRVHA----TDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+VH+ A+ + V+YS+ + P F ++ NTG I LD+E Y
Sbjct: 2197 ---QVHSPVVHIQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAPLDFESHPAY 2251
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 34/178 (19%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-- 70
TS+ ++Y + + + V+++Q++A D DS + Y++ N +F++ P T
Sbjct: 1140 TSEPVYYPEIMENSPK-DVSVVQIEAFDPDSSSNDKLMYKITSGNPQG--FFSIHPKTGL 1196
Query: 71 --------------EH--QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH + + D G S+ A V +++ D ND P+F Y+ +P
Sbjct: 1197 ITTTSRRLDREQQDEHILEVTVTDNGTPPKSTIARVIVKILDENDNKPQFLQKFYKIRLP 1256
Query: 113 EGQD--------GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNK 159
E + + RV ATD DEG NA + YS+ E F ++ TG + + K
Sbjct: 1257 EREKPERERNAKREPLYRVIATDKDEGPNAEISYSIEEGNEHGRFFIEPKTGVVSSKK 1314
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 26/172 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------ATE 71
Y + +G ++QV A DKD GK V Y + N + F +DP A E
Sbjct: 1568 YEGRVYESAAVGSVVLQVTALDKDKGKNAEVVYSIESGNI--GNSFTIDPILGSIKTAKE 1625
Query: 72 HQGPIQDEGGL------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
Q+E L S +V+I VT ++ +P+F S Y + E ++
Sbjct: 1626 LDRSHQEEYDLMVKAADKGNPPMSEMTSVHIFVTIADNASPKFTSREYSIEISE---TIS 1682
Query: 120 VGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
+G Q++VVY +I F ++ ++G + T KALD+E +Y
Sbjct: 1683 IGSFVGIVTAYSQSSVVYEIKDGNIGDAFDINPHSGTVITQKALDFETLPIY 1734
Score = 42.7 bits (99), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR--------VHATDADEG 131
GLS+ T+ + + D ND P F Y + E +V + ATDAD+
Sbjct: 1744 AGLSTNTTMLVHLQDENDNVPVFMQAEYSGLISESASINSVVLTDRNVPLVIRATDADKE 1803
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
NA++ Y + E F +D++TG I T +LDYE+ ++
Sbjct: 1804 SNALLVYHIVEPSVHKYFAIDSSTGAIHTVLSLDYEETSVF 1844
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 77/185 (41%), Gaps = 32/185 (17%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
S + ++ +G ++M V A D+D+G+ G + Y + D + F +D E G
Sbjct: 1037 SFVEKGIVKEDVPIGSSVMTVSARDEDTGRDGEIRYSIRDGS--GVGVFKID---EETGV 1091
Query: 76 IQ--------------------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
I+ D+G LSS + I V D+ND P+ Y + E
Sbjct: 1092 IETSDRLDRESTSHYWLTVYATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIME 1151
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDI-RTNKALDYEKQQL 168
++V ++ A D D N + Y + P F + TG I T++ LD E+Q
Sbjct: 1152 NSPKDVSVVQIEAFDPDSSSNDKLMYKITSGNPQGFFSIHPKTGLITTTSRRLDREQQDE 1211
Query: 169 YLERV 173
++ V
Sbjct: 1212 HILEV 1216
Score = 38.9 bits (89), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G + V+I V DIND P F Y ++ E G +V +V ATD+D N + Y
Sbjct: 2263 GAHAEVFVDIIVEDINDNPPVFVQQSYSATLSEASVIGTSVVQVRATDSDSEPNRGISYQ 2322
Query: 140 V-----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
+ F +D+ TG I + LDYE+ Q + ++F+
Sbjct: 2323 MFGNHSKSHDHFHIDSTTGLISLLRTLDYEQFQQH--KIFV 2361
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 7/103 (6%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVY 137
+G + V I+V D ND P+F + YE +PE + ++ A D DE +N ++Y
Sbjct: 1434 DGTTTILTQVLIKVIDTNDHRPQFSTSKYEVVIPEDTAPETEILQIRAVDKDE-KNKLIY 1492
Query: 138 YSVPEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERVFL 175
P F +D TG + T + LD+E ++ V +
Sbjct: 1493 TLQSSIDPLSLKKFRLDPATGSLSTCEKLDHEAVHQHILTVMV 1535
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 60/143 (41%), Gaps = 28/143 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y A+ + L +++ V A D D + L+ Y +++ N F +DP +G ++
Sbjct: 3341 YTAVISEDAVLEQSVITVMADDADGPLYSLIHYSIIEGNQGGP--FTIDPV---KGEVKV 3395
Query: 78 ----DEGGLS-----------------STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
D +S +T TVNI V+D+ND P F Y + E +
Sbjct: 3396 TKLLDRETISGYTLTIQASDNGSPPRVNTTTVNIDVSDVNDNAPLFSKGNYSVIIQENKP 3455
Query: 117 -GLAVGRVHATDADEGQNAVVYY 138
G +V ++ TD D N ++
Sbjct: 3456 VGFSVLQLVVTDKDSSHNGPPFF 3478
Score = 35.8 bits (81), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 27/127 (21%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNN---------TDAASYF-NLD----------- 67
+G T+++V A D D G+ G V Y + + N T A S NLD
Sbjct: 479 IGTTVLRVSAVDPDDGENGYVTYSIANVNPVPFVINHFTGAVSTSENLDYELMPRVYTLR 538
Query: 68 -PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHA 125
A++ P + E + +T T+N ++ND P F+ + E +VP G + V A
Sbjct: 539 IRASDWGLPYRREVEVLATVTLN----NLNDNTPLFEKINCEGTVPRDLSVGEQITTVSA 594
Query: 126 TDADEGQ 132
DADE Q
Sbjct: 595 IDADELQ 601
>gi|363738908|ref|XP_003642094.1| PREDICTED: protocadherin gamma-A10-like [Gallus gallus]
Length = 685
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 75/163 (46%), Gaps = 23/163 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------E 71
+G TL++V ATD D G G V Y L A+ F+L+P T E
Sbjct: 372 VGSTLLRVTATDPDDGTNGDVTYSLNKATDLASEIFHLEPDTGGIRLVRNLDFEEWNSYE 431
Query: 72 HQGPIQDEGGLSSTATVNIRVTDINDKNPEF--QSLPYEFSVPEGQDGLAVGRVHATDAD 129
+ +D GGL TA V+I VTD+ND PE +S E S + G V +H D D
Sbjct: 432 LELQARDGGGLFDTAKVSISVTDVNDNAPEISVRSALSEIS-EDAAPGTVVALLHVQDRD 490
Query: 130 EGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
G N V S+ E +PF ++ D + T + LD E+ Y
Sbjct: 491 SGANGEVRCSLGEGVPFRLERALDDYYSVVTARELDRERASEY 533
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 64/143 (44%), Gaps = 27/143 (18%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRV 92
L+ KA D++ F + LL +D DPA + TA + + V
Sbjct: 309 LVLAKALDREEAAF----HELLLRASDGG-----DPAR------------TGTARIRVAV 347
Query: 93 TDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE--DIP---F 146
D ND P F Y VPE G + RV ATD D+G N V YS+ + D+ F
Sbjct: 348 LDANDNAPAFSQAVYTVRVPEDVPVGSTLLRVTATDPDDGTNGDVTYSLNKATDLASEIF 407
Query: 147 VVDANTGDIRTNKALDYEKQQLY 169
++ +TG IR + LD+E+ Y
Sbjct: 408 HLEPDTGGIRLVRNLDFEEWNSY 430
>gi|442633558|ref|NP_001027138.2| kugelei, isoform D [Drosophila melanogaster]
gi|440216049|gb|AAZ66056.2| kugelei, isoform D [Drosophila melanogaster]
Length = 4699
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 72/167 (43%), Gaps = 28/167 (16%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD--------------------AASYFNLD 67
+L + +V A DKD G ++Y L+ N D S FNL
Sbjct: 3183 QLNTLITKVHAMDKDFGVNRQIKYSLMGENHDYFKISKSTGIIRLHKSLDRETISLFNLT 3242
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHAT 126
E G + L S ATV + + DIND PEF Y + E G V +V+AT
Sbjct: 3243 VKAEDCGVPK----LHSIATVAVNILDINDNPPEFSMRQYSCKILENATHGTEVCKVYAT 3298
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D G NA ++Y + E F +D+ TGD+ N LDYE + Y
Sbjct: 3299 SIDIGVNADIHYFIMSGNEQGKFKMDSTTGDLVLNATLDYEMSKFYF 3345
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 79/166 (47%), Gaps = 29/166 (17%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL----- 82
+LG T+ ++A D+D G G + + + D + D S F +DP +G +Q G L
Sbjct: 786 QLGETVAWIEAKDRDLGYNGKLVFAISDGDYD--SVFRIDP---DRGELQIIGYLDRERQ 840
Query: 83 -----------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
S++ + I + D+ND P Q F + E + G V +H
Sbjct: 841 NEYVLNITVYDLGNPTKSTSKMLPITILDVNDNRPVIQKTLATFRLTESARIGTVVHCLH 900
Query: 125 ATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
ATDAD G NA V Y++ + F V+A TG +R NK LD EKQ Y
Sbjct: 901 ATDADSGINAQVTYALSVECSDFTVNATTGCLRLNKPLDREKQDNY 946
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 71/160 (44%), Gaps = 26/160 (16%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------------EH-- 72
V ++ +KA D D + Y ++ N YF +D T EH
Sbjct: 1210 VEIITLKAFDPDIDPTQTITYNIVSGN--LVGYFEIDSKTGVIKTTERKLDRENQAEHIL 1267
Query: 73 QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
+ I D G LSST+ + + V DIND +PEF Y+ VP ++ +VHA D+D
Sbjct: 1268 EVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRVYKVQVPSSATVNQSIFQVHAIDSD 1327
Query: 130 EGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQ 166
G+N + YS+ F +D+ G I K LD + +
Sbjct: 1328 SGENGRITYSIKSGKGKNKFRIDSQRGHIHIAKPLDSDNE 1367
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRL-------LDNNTDAASYFN--LDPATEHQGPIQ- 77
+G + + ATD DSG V Y L N T N LD + +
Sbjct: 891 RIGTVVHCLHATDADSGINAQVTYALSVECSDFTVNATTGCLRLNKPLDREKQDNYALHI 950
Query: 78 --DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEG 131
+GG LSS A V + V D+ND P F Y F V E G + + A D D G
Sbjct: 951 TAKDGGSPVLSSEALVYVLVDDVNDNAPVFGVQEYIFKVREDLPRGTVLAVIEAVDEDIG 1010
Query: 132 QNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
NA + +S+ E+ F +D +TG IRT LDYE +Q++
Sbjct: 1011 PNAEIQFSLKEETQDEELFRIDKHTGAIRTQGYLDYENKQVH 1052
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPE 142
S+A V I V D+ND +P F+++ S+ E G V ++ A D D G+N+ + YS+
Sbjct: 489 SSAKVKISVQDMNDNDPIFENVNKVISINENNLAGSFVVKLTAKDRDSGENSYISYSIAN 548
Query: 143 --DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSY 183
+PF +D +G ++T LD+E + E + S + Y
Sbjct: 549 LNAVPFEIDHFSGIVKTTSLLDFETMKRNYELIIRASDWGLPY 591
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--F 146
I V DIND P F Y SVPE Q + +VHA D D G N + YS+ + F
Sbjct: 3157 ITVNDINDNMPIFSMAQYRVSVPEDAQLNTLITKVHAMDKDFGVNRQIKYSLMGENHDYF 3216
Query: 147 VVDANTGDIRTNKALDYEKQQLY 169
+ +TG IR +K+LD E L+
Sbjct: 3217 KISKSTGIIRLHKSLDRETISLF 3239
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS 139
G+ + +++ + D+ND PE +S Y ++PE G + +++ATD D G NA + Y
Sbjct: 2320 GVYAEVVLSVSIMDVNDCYPEIESDIYNLTIPENASFGTQILKINATDNDSGANAKLSYY 2379
Query: 140 VPEDIP-------FVVDANTGDIRTNKALDYEK 165
+ E I F +D G++ LDYE+
Sbjct: 2380 I-ESINGQNNSELFYIDVTDGNLYLKTPLDYEQ 2411
Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVY 137
+G ++ + ++V DIND P+F Y ++ E ++ + ++HATD DE + +
Sbjct: 1483 DGTFTAFTNLLVQVIDINDNPPQFAKDVYHVNISENIEEESVIMQLHATDRDEDKKLFYH 1542
Query: 138 YSVPED----IPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
+D F +D+ +G++ + LD+EK ++ VF+
Sbjct: 1543 LHATQDPSSLALFRIDSISGNVIVTQRLDFEKTAQHILIVFV 1584
Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 22/163 (13%)
Query: 33 LMQVKATDKDSGK------------FGLVEYRL--LDNNTDAASYFNLDPATEHQGPI-- 76
+MQ+ ATD+D K L +R+ + N + + +H +
Sbjct: 1525 IMQLHATDRDEDKKLFYHLHATQDPSSLALFRIDSISGNVIVTQRLDFEKTAQHILIVFV 1584
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
+D+G G + A + + V D ND +PEF + + VPE G + V A D D G N
Sbjct: 1585 KDQGAPGKRNYAKIIVNVHDHNDHHPEFTAKIIQSKVPESAAIGSKLAEVRAIDRDSGHN 1644
Query: 134 AVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
A + YS+ F +D G I L+ K Q Y+ +V
Sbjct: 1645 AEIQYSIITGNVGSVFEIDPTFGIITLAGNLNINKIQEYMLQV 1687
Score = 42.4 bits (98), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LS+ A VNI + DIND +P F Y +V E G + V ATD D N +V Y++
Sbjct: 3358 LSNNAYVNISILDINDNSPTFLQNLYRINVNEDIFVGSKILDVKATDEDSDVNGLVTYNI 3417
Query: 141 P--EDI-PFVVDANTGDIRTNKALDYEKQQLY 169
++I F +D G I ++ LD E Y
Sbjct: 3418 ERGDNIGQFSIDPKNGTISVSRPLDRETISHY 3449
Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 20/155 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y ++ DK +L KA +K G F + R NN N + E+ ++
Sbjct: 102 YRIISGDKEKL------FKAEEKLVGDFAFLAIRTRTNNV----VLNREKTEEYVIRVKA 151
Query: 79 EGGL--------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
L + A ++I+V D ND +P F Y +PE ++ +V A DAD
Sbjct: 152 HVHLHDRNVSSYETEANIHIKVLDRNDLSPLFYPTQYTVVIPEDTPKYQSILKVTADDAD 211
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDY 163
G N +YYS+ D F + TG+I + L Y
Sbjct: 212 LGINGEIYYSLLMDSEYFAIHPTTGEITLLQQLQY 246
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVH----------ATDADEG 131
SS + I + D ND P F Y ++PE G V +VH DAD G
Sbjct: 1796 SSCQNIIIHILDANDNIPYFVQNEYVGALPESAAIGSYVLKVHDSSKDHLTLQVKDADVG 1855
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
N +V Y + +D+ F +D+ TG I + LDYE Y
Sbjct: 1856 VNGMVEYHIVDDLAKNFFKIDSTTGAIELLRQLDYETNAGY 1896
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 63/166 (37%), Gaps = 24/166 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
+Y ++ D + G +MQVKA D DS + G V Y L N F LD + Q
Sbjct: 2145 YYATVSIDDPK-GTIIMQVKAIDLDSAENGEVRYELKKGN---GELFKLDRKSGELSIKQ 2200
Query: 78 DEGG------------------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
G SS A + ++V D P F+ Y SV E + +
Sbjct: 2201 HVEGHNRNYELTVAAYDGAITPCSSEAPLQVKVID--RSMPVFEKQFYTVSVKEDVEMYS 2258
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEK 165
V +++Y E F +D NTG I LDYEK
Sbjct: 2259 ALSVSIEAESPLGRSLIYTISSESQSFEIDYNTGSIFVVNELDYEK 2304
Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG-LAVGRVHATDADEGQNAVVYYSVPEDI 144
A V I V D ND P+F + Y SV E + +++ +V ATDAD G N + Y + D
Sbjct: 2844 ADVLIDVRDENDNYPKFDNTFYSASVAENSEKVISLVKVSATDADTGPNGDIRYYLESDT 2903
Query: 145 P-----FVVDANTGDIRTNKALDYEKQQLYLERVF 174
F +D +G I +LD E Q Y +V
Sbjct: 2904 ENIQNIFDIDIYSGWITLLTSLDREVQSEYNFKVI 2938
Score = 38.9 bits (89), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 56/146 (38%), Gaps = 31/146 (21%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------------ 70
+G ++ VKATD+DS GLV Y + D F++DP
Sbjct: 3393 VGSKILDVKATDEDSDVNGLVTYNI--ERGDNIGQFSIDPKNGTISVSRPLDRETISHYT 3450
Query: 71 -EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDA 128
E Q Q + ++ +NI + D ND P F S Y + E + G +DA
Sbjct: 3451 LEIQACDQGDPQRCNSVPININILDTNDNAPIFSSSNYSVVLQENRLLGYVFLTFKISDA 3510
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD 154
DE P P+ D +G+
Sbjct: 3511 DE---------TPNTTPYTFDIRSGN 3527
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 18/152 (11%)
Query: 37 KATDKDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQGPIQD----EGGL 82
KA DKD +EY++ +D T S N+ T+ + + +G
Sbjct: 2472 KAYDKDISDTDSLEYKIVYGNELQTYSIDKLTGVISLQNMLNFTDKSSTVLNISVSDGVH 2531
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS-V 140
++ A + I + N +P F YE VPE G + V A+D D G A +YY V
Sbjct: 2532 TAYARLKISLLPENVYSPLFDQSTYEAQVPENLLHGHNIITVKASDGDFGTYANLYYEIV 2591
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLYL 170
E++ F++D TG I + D EK+ Y+
Sbjct: 2592 SEEMKKIFLIDQTTGVITSKVTFDREKKDEYV 2623
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 20/113 (17%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------ 68
D+ FY A + E ++L++V ATD D+G G + Y L + + + F++D
Sbjct: 2861 DNTFYSASVAENSEKVISLVKVSATDADTGPNGDIRYYLESDTENIQNIFDIDIYSGWIT 2920
Query: 69 -ATEHQGPIQDEGGLSSTAT------------VNIRVTDINDKNPEFQSLPYE 108
T +Q E A V I++ D ND P F+ LP E
Sbjct: 2921 LLTSLDREVQSEYNFKVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFK-LPIE 2972
>gi|426231067|ref|XP_004009565.1| PREDICTED: protocadherin gamma-A11 [Ovis aries]
Length = 824
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 21/161 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EH 72
G ++ V ATD D G G V Y + + A+ F L+ + E
Sbjct: 258 GTRVLTVNATDPDEGINGQVVYSFRNVESKASKIFQLNSLSGDVLIEGSLDFEKYRLYEM 317
Query: 73 QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEG 131
+ QD GGLS+TA + + V D+ND PE SV E G + ++ D D G
Sbjct: 318 EIQAQDGGGLSTTAKMLVTVVDVNDNAPEITITSSTNSVLENSPPGTVIALLNVQDQDSG 377
Query: 132 QNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
+N V +P ++PF ++ G+ + TN+ALD E+ Q Y
Sbjct: 378 ENGQVSCFIPNNLPFKLEKTYGNYYKLITNRALDREQVQSY 418
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 68/142 (47%), Gaps = 12/142 (8%)
Query: 34 MQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVT 93
+QV+ + LV R LD T AA + L A + PI+ T V + V
Sbjct: 180 LQVRGRTDGAKNPELVLERSLDRETQAAHHLLLT-ALDGGDPIRQ-----GTVPVRVVVL 233
Query: 94 DINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV-----PEDIPFV 147
D+ND P+F YE SVPE G V V+ATD DEG N V YS F
Sbjct: 234 DVNDHIPKFTQSTYEVSVPENLNSGTRVLTVNATDPDEGINGQVVYSFRNVESKASKIFQ 293
Query: 148 VDANTGDIRTNKALDYEKQQLY 169
+++ +GD+ +LD+EK +LY
Sbjct: 294 LNSLSGDVLIEGSLDFEKYRLY 315
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 83/188 (44%), Gaps = 36/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA---SYFNLDPAT----- 70
Y A + + G + V A D+DS + V Y L ++ A SY +++ T
Sbjct: 457 YAAYILENNPRGASFFSVTALDQDSKENAQVTYSLAEDTLQGAPLSSYISINSDTGILYA 516
Query: 71 ----------EHQGPI--QDEGG--LSSTATVNIRVTDINDKNPE--FQSLP------YE 108
E Q + D G LSS +++I V D ND PE + +LP E
Sbjct: 517 LCSFDYEQFHEMQLWVTAHDSGNPPLSSNVSLSIFVLDQNDNVPEILYPALPTDGSTGVE 576
Query: 109 FSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL---D 162
+ + G V +V A D D GQNA + Y + E F+V +TG++RT +AL D
Sbjct: 577 LAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFLVGLHTGEVRTARALLDRD 636
Query: 163 YEKQQLYL 170
KQ L +
Sbjct: 637 ALKQSLVV 644
>gi|405959520|gb|EKC25549.1| Protocadherin Fat 4 [Crassostrea gigas]
Length = 1475
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 29/167 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------------ATEHQ 73
+G+ + +K D D + + +L N D++ F LDP ++
Sbjct: 887 VGIRIFSIKVQDPDDNRN--FNFSILTGNIDSS--FTLDPTDGYLILSSKLDRELVERYE 942
Query: 74 GPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDA 128
IQ D G S++ T I + D+ND P F+S Y+FSV E VG+V ATD
Sbjct: 943 IVIQVADVGDPSFSTSVTTTINIDDVNDVKPAFKSSSYDFSVKEHTMLATTVGKVEATDG 1002
Query: 129 DEGQNAVVYYSVPE-----DIPFVVDANTGDIRTNKALDYEKQQLYL 170
DEG+N+ ++YS+ D F ++ ++G+I T K LD E + YL
Sbjct: 1003 DEGENSKLFYSIATLWTGGDGMFAINQSSGEIYTIKDLDREIESQYL 1049
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 73/163 (44%), Gaps = 25/163 (15%)
Query: 30 GVTLMQVKATDKDS-GKFGLVEYRLLDNNTDAASYFNLDP---------------ATEHQ 73
G T+ V A DKD+ G + Y ++ N S+F ++P ATE
Sbjct: 679 GQTIESVTADDKDTTGDNMKLSYSIVSGN--GESFFQINPNTGKLMVDSPPDYEVATEVL 736
Query: 74 GPIQ--DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDA 128
I+ D+G S +V I + DIND P F S + +PE G +V ++ A+D
Sbjct: 737 LVIRATDKGTPQQSEVCSVRIEIKDINDNQPMFSSSTIQIWIPEDVAVGKSVTQIFASDK 796
Query: 129 DEGQNA--VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D N + YS ++PF +D ++G + LD E + Y
Sbjct: 797 DSALNGNNKMSYSSDSNVPFEIDPSSGVVTVTNDLDRETTERY 839
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 74/177 (41%), Gaps = 28/177 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF-------------N 65
Y ++ L T+ +V+ATD D G+ + Y + T F +
Sbjct: 980 YDFSVKEHTMLATTVGKVEATDGDEGENSKLFYSIATLWTGGDGMFAINQSSGEIYTIKD 1039
Query: 66 LDPATEHQ----GPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGL 118
LD E Q +QD G S+ TVNI V DIND+ P F+ Y+ S+ E G
Sbjct: 1040 LDREIESQYLLWIRVQDGGSPPFSTEITVNITVEDINDQTPVFEKQAYKASILENLAKGS 1099
Query: 119 AVGRVHATDADEGQNAVVYYSV----PEDIP----FVVDANTGDIRTNKALDYEKQQ 167
+ A D DEG N V Y + E I F V + +GDI + +D E Q
Sbjct: 1100 KILTAKALDLDEGLNGEVIYEIDFTTQEGILAEQFFGVRSESGDIILKRQVDREVYQ 1156
Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD-EGQNAVV 136
+GG STATV + V D+N+ P+F Y FSV E G + V A D D G N +
Sbjct: 641 DGGRQSTATVMVEVIDVNEP-PQFTKSNYRFSVNENTASGQTIESVTADDKDTTGDNMKL 699
Query: 137 YYSVPE---DIPFVVDANTGDIRTNKALDYE 164
YS+ + F ++ NTG + + DYE
Sbjct: 700 SYSIVSGNGESFFQINPNTGKLMVDSPPDYE 730
Score = 38.9 bits (89), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 34/165 (20%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQ---GPIQDEGGLSST 85
+G + + +DKD F L YR+ + YF++ + + Q G + D G S +
Sbjct: 286 VGSKIAAIDCSDKDGSSFPL-SYRIFPQD-----YFDITGSGDLQVKRGLVYDSGTYSHS 339
Query: 86 ATVNIR-------------VTDINDKNPEFQSLPYEFSVPEGQD---GLAVGRVHATDAD 129
TV +R +T +ND P F +L SV +D G + V D+D
Sbjct: 340 LTVEVRDSVHTATVNVLILLTPVNDFRPNFLAL----SVDVREDTLIGAEIATVSVIDSD 395
Query: 130 EGQNAVVYY---SVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+ V + SV +P F++D+++G I LDYE Y
Sbjct: 396 AYPDNVHQFSIVSVENGLPDSFLIDSSSGKIYLAHKLDYESTTFY 440
>gi|291232409|ref|XP_002736151.1| PREDICTED: FAT tumor suppressor homolog 1-like [Saccoglossus
kowalevskii]
Length = 2630
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 77/163 (47%), Gaps = 28/163 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------ATEHQGPIQDEGGL 82
G T+ QV ATD D G G VEY ++ T A F +DP A ++ G+
Sbjct: 562 GTTVTQVLATDADVGTNGQVEYSIVRRET-ADLNFRIDPNLGIITTARRFDREVKRIYGI 620
Query: 83 SSTAT------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDAD 129
S AT +NI +TD+ND P F+ YE+ + E Q G + RV A DAD
Sbjct: 621 SVAATDLAPDPLIGICQMNIEITDVNDNTPHFEQRSYEYQLREDTQVGTSFLRVAAQDAD 680
Query: 130 EGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLER 172
G NA + YS+ ++ F V+ TG + Y K +YL +
Sbjct: 681 TGYNAEISYSLSDEEYFSVNNATGWV-------YVKNAIYLSQ 716
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 76/186 (40%), Gaps = 35/186 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL-DNNTDAASYFNLDPAT------- 70
YGA + G + QV A D D+G + Y ++ D TD + F ++ T
Sbjct: 872 YGASVPEMSIQGTFVFQVTAEDADTGSNAEITYSIIEDPETDDWNSFRINSRTGQIYTTQ 931
Query: 71 ----EHQG-------------------PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPY 107
E +G P + S TA V I V+DIND P F S +
Sbjct: 932 RFDRETKGSYLIEVRSQDGAPSDRTFDPDNPDAPNSDTAAVRIVVSDINDNAPAFDSTEF 991
Query: 108 EFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDY 163
+V E ++ G A+ V ATD DEG N+ + Y + F V G I LDY
Sbjct: 992 YATVEEDRETGFAITTVTATDEDEGANSQIRYQITSGNLGGVFRVVPEVGRIEIAAPLDY 1051
Query: 164 EKQQLY 169
E+ + Y
Sbjct: 1052 EQTRSY 1057
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
L S ATV I + D+ND P F Y SVPE G V +V A DAD G NA + YS+
Sbjct: 847 LPSYATVEINLIDVNDNVPLFSLPNYGASVPEMSIQGTFVFQVTAEDADTGSNAEITYSI 906
Query: 141 PEDI------PFVVDANTGDIRTNKALDYEKQQLYLERV 173
ED F +++ TG I T + D E + YL V
Sbjct: 907 IEDPETDDWNSFRINSRTGQIYTTQRFDRETKGSYLIEV 945
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 84 STATVNIRVTDINDKNPEFQSLP-YEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVP 141
S A V I+V D+N+ P F + Y +V E +G V +V ATDAD G N V YS+
Sbjct: 527 SQAIVIIQVNDVNNNRPVFPNCANYNPTVAENSPEGTTVTQVLATDADVGTNGQVEYSIV 586
Query: 142 E----DIPFVVDANTGDIRTNKALDYEKQQLY 169
D+ F +D N G I T + D E +++Y
Sbjct: 587 RRETADLNFRIDPNLGIITTARRFDREVKRIY 618
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 27/176 (15%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQG 74
FY + D+ E G + V ATD+D G + Y++ N F + P E
Sbjct: 991 FYATVEEDR-ETGFAITTVTATDEDEGANSQIRYQITSGN--LGGVFRVVPEVGRIEIAA 1047
Query: 75 P-------------IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-- 119
P + +G +TA VNI V ++ND PEFQ+ Y S+ E + +
Sbjct: 1048 PLDYEQTRSYALTFVASDGLNENTAIVNIDVVNVNDNPPEFQA-EYVPSIWEEDENIPVY 1106
Query: 120 VGRVHATDADEGQNAV--VYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
V V+A D D + + YS+ + FV+D ++G I KALD E Q ++
Sbjct: 1107 VTTVYAIDPDLDSDDDHNIVYSLQGQGANEEFVIDPHSGVIHATKALDREDQAQWI 1162
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 70/166 (42%), Gaps = 31/166 (18%)
Query: 33 LMQVKATDKDSGKFGLVEYRL------------------LDNNTDAASYFNLDPATEHQG 74
++ V ATD DSG + Y + LD + + Y + A +H
Sbjct: 356 VVTVLATDCDSGTNAQLSYSIDNNAFQINSLGEIRPSVKLDYESTNSLYTIIATAKDHGS 415
Query: 75 PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQN 133
P + + TAT+N+R+ + ND+ P F Y++ V E DG V V ATD D
Sbjct: 416 PSK-----TGTATINVRIKNYNDEPPRFSQNTYKYFVAENAPDGFQVATVIATDPDGDG- 469
Query: 134 AVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
V YS+ ED F ++ +TG I D Q YL V I
Sbjct: 470 --VKYSISAGNEDRNFEINRDTGVITLTATRDL-TQASYLINVTAI 512
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 66/161 (40%), Gaps = 27/161 (16%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDN-NTDAASYFNLDPAT-----------EHQGPI-- 76
+T+ V D + G Y++++N D F +DP T P+
Sbjct: 1215 MTMAAVDLDDPNEGDNAQCTYKIIENAEKDGEVIFAIDPVTAEITTLVDWLDREDVPVYN 1274
Query: 77 -----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADE 130
D GGL+ +AT I + DIND PEF Y + E G +V V A D D
Sbjct: 1275 IVVEATDGGGLTGSATATIELEDINDNAPEFTEDKYYRAASESLLVGASVLTVTALDMDV 1334
Query: 131 GQNAVVYYSVPED-------IPFVVDANTGDIRTNKALDYE 164
G NA + Y + + + + N G I+ + LDYE
Sbjct: 1335 GVNAQLDYKITDGNIGNHFYMYNDIANNVGIIKIQEMLDYE 1375
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 10/91 (10%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE----GQDGLAVGRVHATDADEGQ 132
+D GL A + I + DIND P F + PY +VPE G + + V D +EG
Sbjct: 1170 EDGAGLDGFADIVISLRDINDNAPTFPNGPYMGTVPEHSLAGTYVMTMAAVDLDDPNEGD 1229
Query: 133 NAVVYYSVPE------DIPFVVDANTGDIRT 157
NA Y + E ++ F +D T +I T
Sbjct: 1230 NAQCTYKIIENAEKDGEVIFAIDPVTAEITT 1260
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 70/170 (41%), Gaps = 31/170 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----EHQ 73
Y A+ GV++ Q++A+D DS LD+ +D F +D T + Q
Sbjct: 136 YNAVVPTNAPTGVSIYQLQASDADSNSLNYN----LDSTSDDQGLFEVDQTTGTIRTKLQ 191
Query: 74 GPIQDEGGLSSTATVNIRVTD-IN------------DKNPEFQSLPYEFSVPEG-QDGLA 119
G + + G + +R D +N + P+F YE +PE Q G A
Sbjct: 192 GGQRYQEGFE--YILRVRANDGVNYSPLAAVSIIGGRRPPQFVKARYEVDIPENTQSGYA 249
Query: 120 VGRVHATDADEGQNAVVYYSVPED----IPFVVDANTGDIRTNKALDYEK 165
+ RV A G VV Y + F + +G I NKALDYE+
Sbjct: 250 LVRVEAFSFTRG--TVVTYQFMSQGADLMIFTIGTTSGQITVNKALDYEQ 297
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 63/158 (39%), Gaps = 25/158 (15%)
Query: 8 SALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD 67
+A E T D Y A + +G +++ V A D D G ++Y++ D N Y D
Sbjct: 1301 NAPEFTEDK--YYRAASESLLVGASVLTVTALDMDVGVNAQLDYKITDGNIGNHFYMYND 1358
Query: 68 PA-----------------TEHQGPIQDE---GGLSSTATVNIRVTDINDKNPEFQSLPY 107
A T+ Q + E TA I V D ND P F Y
Sbjct: 1359 IANNVGIIKIQEMLDYEDITQRQFTLTLEVCDPDFCDTAECLITVEDFNDNPPVFDPNLY 1418
Query: 108 EFSVPEGQD-GLAVGRVHATDADEG--QNAVVYYSVPE 142
+ SV E +G V+ATDAD N+ YY++ E
Sbjct: 1419 QASVYENASLNTILGTVYATDADHSSTNNSRFYYTIAE 1456
>gi|442633556|ref|NP_649171.3| kugelei, isoform C [Drosophila melanogaster]
gi|440216048|gb|AAF49078.3| kugelei, isoform C [Drosophila melanogaster]
Length = 4689
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 72/167 (43%), Gaps = 28/167 (16%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD--------------------AASYFNLD 67
+L + +V A DKD G ++Y L+ N D S FNL
Sbjct: 3183 QLNTLITKVHAMDKDFGVNRQIKYSLMGENHDYFKISKSTGIIRLHKSLDRETISLFNLT 3242
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHAT 126
E G + L S ATV + + DIND PEF Y + E G V +V+AT
Sbjct: 3243 VKAEDCGVPK----LHSIATVAVNILDINDNPPEFSMRQYSCKILENATHGTEVCKVYAT 3298
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D G NA ++Y + E F +D+ TGD+ N LDYE + Y
Sbjct: 3299 SIDIGVNADIHYFIMSGNEQGKFKMDSTTGDLVLNATLDYEMSKFYF 3345
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 79/166 (47%), Gaps = 29/166 (17%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL----- 82
+LG T+ ++A D+D G G + + + D + D S F +DP +G +Q G L
Sbjct: 786 QLGETVAWIEAKDRDLGYNGKLVFAISDGDYD--SVFRIDP---DRGELQIIGYLDRERQ 840
Query: 83 -----------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
S++ + I + D+ND P Q F + E + G V +H
Sbjct: 841 NEYVLNITVYDLGNPTKSTSKMLPITILDVNDNRPVIQKTLATFRLTESARIGTVVHCLH 900
Query: 125 ATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
ATDAD G NA V Y++ + F V+A TG +R NK LD EKQ Y
Sbjct: 901 ATDADSGINAQVTYALSVECSDFTVNATTGCLRLNKPLDREKQDNY 946
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 71/160 (44%), Gaps = 26/160 (16%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------------EH-- 72
V ++ +KA D D + Y ++ N YF +D T EH
Sbjct: 1210 VEIITLKAFDPDIDPTQTITYNIVSGN--LVGYFEIDSKTGVIKTTERKLDRENQAEHIL 1267
Query: 73 QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
+ I D G LSST+ + + V DIND +PEF Y+ VP ++ +VHA D+D
Sbjct: 1268 EVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRVYKVQVPSSATVNQSIFQVHAIDSD 1327
Query: 130 EGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQ 166
G+N + YS+ F +D+ G I K LD + +
Sbjct: 1328 SGENGRITYSIKSGKGKNKFRIDSQRGHIHIAKPLDSDNE 1367
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRL-------LDNNTDAASYFN--LDPATEHQGPIQ- 77
+G + + ATD DSG V Y L N T N LD + +
Sbjct: 891 RIGTVVHCLHATDADSGINAQVTYALSVECSDFTVNATTGCLRLNKPLDREKQDNYALHI 950
Query: 78 --DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEG 131
+GG LSS A V + V D+ND P F Y F V E G + + A D D G
Sbjct: 951 TAKDGGSPVLSSEALVYVLVDDVNDNAPVFGVQEYIFKVREDLPRGTVLAVIEAVDEDIG 1010
Query: 132 QNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
NA + +S+ E+ F +D +TG IRT LDYE +Q++
Sbjct: 1011 PNAEIQFSLKEETQDEELFRIDKHTGAIRTQGYLDYENKQVH 1052
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPE 142
S+A V I V D+ND +P F+++ S+ E G V ++ A D D G+N+ + YS+
Sbjct: 489 SSAKVKISVQDMNDNDPIFENVNKVISINENNLAGSFVVKLTAKDRDSGENSYISYSIAN 548
Query: 143 --DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSY 183
+PF +D +G ++T LD+E + E + S + Y
Sbjct: 549 LNAVPFEIDHFSGIVKTTSLLDFETMKRNYELIIRASDWGLPY 591
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--F 146
I V DIND P F Y SVPE Q + +VHA D D G N + YS+ + F
Sbjct: 3157 ITVNDINDNMPIFSMAQYRVSVPEDAQLNTLITKVHAMDKDFGVNRQIKYSLMGENHDYF 3216
Query: 147 VVDANTGDIRTNKALDYEKQQLY 169
+ +TG IR +K+LD E L+
Sbjct: 3217 KISKSTGIIRLHKSLDRETISLF 3239
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS 139
G+ + +++ + D+ND PE +S Y ++PE G + +++ATD D G NA + Y
Sbjct: 2320 GVYAEVVLSVSIMDVNDCYPEIESDIYNLTIPENASFGTQILKINATDNDSGANAKLSYY 2379
Query: 140 VPEDIP-------FVVDANTGDIRTNKALDYEK 165
+ E I F +D G++ LDYE+
Sbjct: 2380 I-ESINGQNNSELFYIDVTDGNLYLKTPLDYEQ 2411
Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVY 137
+G ++ + ++V DIND P+F Y ++ E ++ + ++HATD DE + +
Sbjct: 1483 DGTFTAFTNLLVQVIDINDNPPQFAKDVYHVNISENIEEESVIMQLHATDRDEDKKLFYH 1542
Query: 138 YSVPED----IPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
+D F +D+ +G++ + LD+EK ++ VF+
Sbjct: 1543 LHATQDPSSLALFRIDSISGNVIVTQRLDFEKTAQHILIVFV 1584
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 22/163 (13%)
Query: 33 LMQVKATDKDSGK------------FGLVEYRL--LDNNTDAASYFNLDPATEHQGPI-- 76
+MQ+ ATD+D K L +R+ + N + + +H +
Sbjct: 1525 IMQLHATDRDEDKKLFYHLHATQDPSSLALFRIDSISGNVIVTQRLDFEKTAQHILIVFV 1584
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
+D+G G + A + + V D ND +PEF + + VPE G + V A D D G N
Sbjct: 1585 KDQGAPGKRNYAKIIVNVHDHNDHHPEFTAKIIQSKVPESAAIGSKLAEVRAIDRDSGHN 1644
Query: 134 AVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
A + YS+ F +D G I L+ K Q Y+ +V
Sbjct: 1645 AEIQYSIITGNVGSVFEIDPTFGIITLAGNLNINKIQEYMLQV 1687
Score = 42.4 bits (98), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LS+ A VNI + DIND +P F Y +V E G + V ATD D N +V Y++
Sbjct: 3358 LSNNAYVNISILDINDNSPTFLQNLYRINVNEDIFVGSKILDVKATDEDSDVNGLVTYNI 3417
Query: 141 P--EDI-PFVVDANTGDIRTNKALDYEKQQLY 169
++I F +D G I ++ LD E Y
Sbjct: 3418 ERGDNIGQFSIDPKNGTISVSRPLDRETISHY 3449
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 20/155 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y ++ DK +L KA +K G F + R NN N + E+ ++
Sbjct: 102 YRIISGDKEKL------FKAEEKLVGDFAFLAIRTRTNNV----VLNREKTEEYVIRVKA 151
Query: 79 EGGL--------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
L + A ++I+V D ND +P F Y +PE ++ +V A DAD
Sbjct: 152 HVHLHDRNVSSYETEANIHIKVLDRNDLSPLFYPTQYTVVIPEDTPKYQSILKVTADDAD 211
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDY 163
G N +YYS+ D F + TG+I + L Y
Sbjct: 212 LGINGEIYYSLLMDSEYFAIHPTTGEITLLQQLQY 246
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVH----------ATDADEG 131
SS + I + D ND P F Y ++PE G V +VH DAD G
Sbjct: 1796 SSCQNIIIHILDANDNIPYFVQNEYVGALPESAAIGSYVLKVHDSSKDHLTLQVKDADVG 1855
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
N +V Y + +D+ F +D+ TG I + LDYE Y
Sbjct: 1856 VNGMVEYHIVDDLAKNFFKIDSTTGAIELLRQLDYETNAGY 1896
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 63/166 (37%), Gaps = 24/166 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
+Y ++ D + G +MQVKA D DS + G V Y L N F LD + Q
Sbjct: 2145 YYATVSIDDPK-GTIIMQVKAIDLDSAENGEVRYELKKGN---GELFKLDRKSGELSIKQ 2200
Query: 78 DEGG------------------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
G SS A + ++V D P F+ Y SV E + +
Sbjct: 2201 HVEGHNRNYELTVAAYDGAITPCSSEAPLQVKVID--RSMPVFEKQFYTVSVKEDVEMYS 2258
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEK 165
V +++Y E F +D NTG I LDYEK
Sbjct: 2259 ALSVSIEAESPLGRSLIYTISSESQSFEIDYNTGSIFVVNELDYEK 2304
Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG-LAVGRVHATDADEGQNAVVYYSVPEDI 144
A V I V D ND P+F + Y SV E + +++ +V ATDAD G N + Y + D
Sbjct: 2844 ADVLIDVRDENDNYPKFDNTFYSASVAENSEKVISLVKVSATDADTGPNGDIRYYLESDT 2903
Query: 145 P-----FVVDANTGDIRTNKALDYEKQQLYLERVF 174
F +D +G I +LD E Q Y +V
Sbjct: 2904 ENIQNIFDIDIYSGWITLLTSLDREVQSEYNFKVI 2938
Score = 38.9 bits (89), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 56/146 (38%), Gaps = 31/146 (21%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------------ 70
+G ++ VKATD+DS GLV Y + D F++DP
Sbjct: 3393 VGSKILDVKATDEDSDVNGLVTYNI--ERGDNIGQFSIDPKNGTISVSRPLDRETISHYT 3450
Query: 71 -EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDA 128
E Q Q + ++ +NI + D ND P F S Y + E + G +DA
Sbjct: 3451 LEIQACDQGDPQRCNSVPININILDTNDNAPIFSSSNYSVVLQENRLLGYVFLTFKISDA 3510
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD 154
DE P P+ D +G+
Sbjct: 3511 DE---------TPNTTPYTFDIRSGN 3527
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 18/152 (11%)
Query: 37 KATDKDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQGPIQD----EGGL 82
KA DKD +EY++ +D T S N+ T+ + + +G
Sbjct: 2472 KAYDKDISDTDSLEYKIVYGNELQTYSIDKLTGVISLQNMLNFTDKSSTVLNISVSDGVH 2531
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS-V 140
++ A + I + N +P F YE VPE G + V A+D D G A +YY V
Sbjct: 2532 TAYARLKISLLPENVYSPLFDQSTYEAQVPENLLHGHNIITVKASDGDFGTYANLYYEIV 2591
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLYL 170
E++ F++D TG I + D EK+ Y+
Sbjct: 2592 SEEMKKIFLIDQTTGVITSKVTFDREKKDEYV 2623
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 20/113 (17%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------ 68
D+ FY A + E ++L++V ATD D+G G + Y L + + + F++D
Sbjct: 2861 DNTFYSASVAENSEKVISLVKVSATDADTGPNGDIRYYLESDTENIQNIFDIDIYSGWIT 2920
Query: 69 -ATEHQGPIQDEGGLSSTAT------------VNIRVTDINDKNPEFQSLPYE 108
T +Q E A V I++ D ND P F+ LP E
Sbjct: 2921 LLTSLDREVQSEYNFKVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFK-LPIE 2972
>gi|25090328|sp|Q9VW71.2|FAT2_DROME RecName: Full=Fat-like cadherin-related tumor suppressor homolog;
AltName: Full=Protein kugelei; Flags: Precursor
Length = 4705
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 72/167 (43%), Gaps = 28/167 (16%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD--------------------AASYFNLD 67
+L + +V A DKD G ++Y L+ N D S FNL
Sbjct: 3199 QLNTLITKVHAMDKDFGVNRQIKYSLMGENHDYFKISKSTGIIRLHKSLDRETISLFNLT 3258
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHAT 126
E G + L S ATV + + DIND PEF Y + E G V +V+AT
Sbjct: 3259 VKAEDCGVPK----LHSIATVAVNILDINDNPPEFSMRQYSCKILENATHGTEVCKVYAT 3314
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D G NA ++Y + E F +D+ TGD+ N LDYE + Y
Sbjct: 3315 SIDIGVNADIHYFIMSGNEQGKFKMDSTTGDLVLNATLDYEMSKFYF 3361
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 79/166 (47%), Gaps = 29/166 (17%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL----- 82
+LG T+ ++A D+D G G + + + D + D S F +DP +G +Q G L
Sbjct: 783 QLGETVAWIEAKDRDLGYNGKLVFAISDGDYD--SVFRIDP---DRGELQIIGYLDRERQ 837
Query: 83 -----------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
S++ + I + D+ND P Q F + E + G V +H
Sbjct: 838 NEYVLNITVYDLGNPTKSTSKMLPITILDVNDNRPVIQKTLATFRLTESARIGTVVHCLH 897
Query: 125 ATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
ATDAD G NA V Y++ + F V+A TG +R NK LD EKQ Y
Sbjct: 898 ATDADSGINAQVTYALSVECSDFTVNATTGCLRLNKPLDREKQDNY 943
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 71/160 (44%), Gaps = 26/160 (16%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------------EH-- 72
V ++ +KA D D + Y ++ N YF +D T EH
Sbjct: 1207 VEIITLKAFDPDIDPTQTITYNIVSGN--LVGYFEIDSKTGVIKTTERKLDRENQAEHIL 1264
Query: 73 QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
+ I D G LSST+ + + V DIND +PEF Y+ VP ++ +VHA D+D
Sbjct: 1265 EVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRVYKVQVPSSATVNQSIFQVHAIDSD 1324
Query: 130 EGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQ 166
G+N + YS+ F +D+ G I K LD + +
Sbjct: 1325 SGENGRITYSIKSGKGKNKFRIDSQRGHIHIAKPLDSDNE 1364
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRL-------LDNNTDAASYFN--LDPATEHQGPIQ- 77
+G + + ATD DSG V Y L N T N LD + +
Sbjct: 888 RIGTVVHCLHATDADSGINAQVTYALSVECSDFTVNATTGCLRLNKPLDREKQDNYALHI 947
Query: 78 --DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEG 131
+GG LSS A V + V D+ND P F Y F V E G + + A D D G
Sbjct: 948 TAKDGGSPVLSSEALVYVLVDDVNDNAPVFGVQEYIFKVREDLPRGTVLAVIEAVDEDIG 1007
Query: 132 QNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
NA + +S+ E+ F +D +TG IRT LDYE +Q++
Sbjct: 1008 PNAEIQFSLKEETQDEELFRIDKHTGAIRTQGYLDYENKQVH 1049
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPE 142
S+A V I V D+ND +P F+++ S+ E G V ++ A D D G+N+ + YS+
Sbjct: 486 SSAKVKISVQDMNDNDPIFENVNKVISINENNLAGSFVVKLTAKDRDSGENSYISYSIAN 545
Query: 143 --DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSY 183
+PF +D +G ++T LD+E + E + S + Y
Sbjct: 546 LNAVPFEIDHFSGIVKTTSLLDFETMKRNYELIIRASDWGLPY 588
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--F 146
I V DIND P F Y SVPE Q + +VHA D D G N + YS+ + F
Sbjct: 3173 ITVNDINDNMPIFSMAQYRVSVPEDAQLNTLITKVHAMDKDFGVNRQIKYSLMGENHDYF 3232
Query: 147 VVDANTGDIRTNKALDYEKQQLY 169
+ +TG IR +K+LD E L+
Sbjct: 3233 KISKSTGIIRLHKSLDRETISLF 3255
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS 139
G+ + +++ + D+ND PE +S Y ++PE G + +++ATD D G NA + Y
Sbjct: 2317 GVYAEVVLSVSIMDVNDCYPEIESDIYNLTIPENASFGTQILKINATDNDSGANAKLSYY 2376
Query: 140 VPEDIP-------FVVDANTGDIRTNKALDYEK 165
+ E I F +D G++ LDYE+
Sbjct: 2377 I-ESINGQNNSELFYIDVTDGNLYLKTPLDYEQ 2408
Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVY 137
+G ++ + ++V DIND P+F Y ++ E ++ + ++HATD DE + +
Sbjct: 1480 DGTFTAFTNLLVQVIDINDNPPQFAKDVYHVNISENIEEESVIMQLHATDRDEDKKLFYH 1539
Query: 138 YSVPED----IPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
+D F +D+ +G++ + LD+EK ++ VF+
Sbjct: 1540 LHATQDPSSLALFRIDSISGNVIVTQRLDFEKTAQHILIVFV 1581
Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 22/163 (13%)
Query: 33 LMQVKATDKDSGK------------FGLVEYRL--LDNNTDAASYFNLDPATEHQGPI-- 76
+MQ+ ATD+D K L +R+ + N + + +H +
Sbjct: 1522 IMQLHATDRDEDKKLFYHLHATQDPSSLALFRIDSISGNVIVTQRLDFEKTAQHILIVFV 1581
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
+D+G G + A + + V D ND +PEF + + VPE G + V A D D G N
Sbjct: 1582 KDQGAPGKRNYAKIIVNVHDHNDHHPEFTAKIIQSKVPESAAIGSKLAEVRAIDRDSGHN 1641
Query: 134 AVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
A + YS+ F +D G I L+ K Q Y+ +V
Sbjct: 1642 AEIQYSIITGNVGSVFEIDPTFGIITLAGNLNINKIQEYMLQV 1684
Score = 42.4 bits (98), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LS+ A VNI + DIND +P F Y +V E G + V ATD D N +V Y++
Sbjct: 3374 LSNNAYVNISILDINDNSPTFLQNLYRINVNEDIFVGSKILDVKATDEDSDVNGLVTYNI 3433
Query: 141 P--EDI-PFVVDANTGDIRTNKALDYEKQQLY 169
++I F +D G I ++ LD E Y
Sbjct: 3434 ERGDNIGQFSIDPKNGTISVSRPLDRETISHY 3465
Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 66/155 (42%), Gaps = 20/155 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y ++ DK +L KA +K G F + R NN N + E+ ++
Sbjct: 99 YRIISGDKEKL------FKAEEKLVGDFAFLAIRTRTNNV----VLNREKTEEYVIRVKA 148
Query: 79 EGGL--------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDAD 129
L + A ++I+V D ND +P F Y +PE ++ +V A DAD
Sbjct: 149 HVHLHDRNVSSYETEANIHIKVLDRNDLSPLFYPTQYTVVIPEDTPKYQSILKVTADDAD 208
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDY 163
G N +YYS+ D F + TG+I + L Y
Sbjct: 209 LGINGEIYYSLLMDSEYFAIHPTTGEITLLQQLQY 243
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVH----------ATDADEG 131
SS + I + D ND P F Y ++PE G V +VH DAD G
Sbjct: 1793 SSCQNIIIHILDANDNIPYFVQNEYVGALPESAAIGSYVLKVHDSSKDHLTLQVKDADVG 1852
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
N +V Y + +D+ F +D+ TG I + LDYE Y
Sbjct: 1853 VNGMVEYHIVDDLAKNFFKIDSTTGAIELLRQLDYETNAGY 1893
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 63/166 (37%), Gaps = 24/166 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
+Y ++ D + G +MQVKA D DS + G V Y L N F LD + Q
Sbjct: 2142 YYATVSIDDPK-GTIIMQVKAIDLDSAENGEVRYELKKGN---GELFKLDRKSGELSIKQ 2197
Query: 78 DEGG------------------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
G SS A + ++V D P F+ Y SV E + +
Sbjct: 2198 HVEGHNRNYELTVAAYDGAITPCSSEAPLQVKVID--RSMPVFEKQFYTVSVKEDVEMYS 2255
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEK 165
V +++Y E F +D NTG I LDYEK
Sbjct: 2256 ALSVSIEAESPLGRSLIYTISSESQSFEIDYNTGSIFVVNELDYEK 2301
Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG-LAVGRVHATDADEGQNAVVYYSVPEDI 144
A V I V D ND P+F + Y SV E + +++ +V ATDAD G N + Y + D
Sbjct: 2860 ADVLIDVRDENDNYPKFDNTFYSASVAENSEKVISLVKVSATDADTGPNGDIRYYLESDT 2919
Query: 145 P-----FVVDANTGDIRTNKALDYEKQQLYLERVF 174
F +D +G I +LD E Q Y +V
Sbjct: 2920 ENIQNIFDIDIYSGWITLLTSLDREVQSEYNFKVI 2954
Score = 38.9 bits (89), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 56/146 (38%), Gaps = 31/146 (21%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------------ 70
+G ++ VKATD+DS GLV Y + D F++DP
Sbjct: 3409 VGSKILDVKATDEDSDVNGLVTYNI--ERGDNIGQFSIDPKNGTISVSRPLDRETISHYT 3466
Query: 71 -EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDA 128
E Q Q + ++ +NI + D ND P F S Y + E + G +DA
Sbjct: 3467 LEIQACDQGDPQRCNSVPININILDTNDNAPIFSSSNYSVVLQENRLLGYVFLTFKISDA 3526
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD 154
DE P P+ D +G+
Sbjct: 3527 DE---------TPNTTPYTFDIRSGN 3543
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 18/152 (11%)
Query: 37 KATDKDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQGPIQD----EGGL 82
KA DKD +EY++ +D T S N+ T+ + + +G
Sbjct: 2488 KAYDKDISDTDSLEYKIVYGNELQTYSIDKLTGVISLQNMLNFTDKSSTVLNISVSDGVH 2547
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS-V 140
++ A + I + N +P F YE VPE G + V A+D D G A +YY V
Sbjct: 2548 TAYARLKISLLPENVYSPLFDQSTYEAQVPENLLHGHNIITVKASDGDFGTYANLYYEIV 2607
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLYL 170
E++ F++D TG I + D EK+ Y+
Sbjct: 2608 SEEMKKIFLIDQTTGVITSKVTFDREKKDEYV 2639
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 20/113 (17%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------ 68
D+ FY A + E ++L++V ATD D+G G + Y L + + + F++D
Sbjct: 2877 DNTFYSASVAENSEKVISLVKVSATDADTGPNGDIRYYLESDTENIQNIFDIDIYSGWIT 2936
Query: 69 -ATEHQGPIQDEGGLSSTAT------------VNIRVTDINDKNPEFQSLPYE 108
T +Q E A V I++ D ND P F+ LP E
Sbjct: 2937 LLTSLDREVQSEYNFKVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFK-LPIE 2988
>gi|395817405|ref|XP_003782162.1| PREDICTED: protocadherin alpha-C2 isoform 2 [Otolemur garnettii]
Length = 950
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 13/147 (8%)
Query: 34 MQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVT 93
+ VKA ++++ LV + LD A L AT+ P L+ T + + V
Sbjct: 180 LDVKAKNEENKLVELVLRKPLDREAATAHSLFLT-ATDGGKP-----DLTGTVQLLVTVL 233
Query: 94 DINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP------F 146
D+ND P F+ YE + E ++G V R++A+D DEG NA + YS +P F
Sbjct: 234 DVNDNAPTFEQSEYEVRIFENAENGTTVIRLNASDRDEGANAAISYSFNRLVPTMIIDQF 293
Query: 147 VVDANTGDIRTNKALDYEKQQLYLERV 173
+DANTG+I LD+E+ LY RV
Sbjct: 294 SIDANTGEIVIQGNLDFEQVNLYKIRV 320
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
L +TA+V++ VTD+ND P F Y V E G + V A D D +NA+V YS+
Sbjct: 435 LWATASVSVEVTDVNDNAPVFAQPEYTVFVKENNLPGCHIFTVSAQDTDAQENALVSYSL 494
Query: 141 PED-------IPFV-VDANTGDIRTNKALDYEKQQL 168
E +V V A +G + + LD+E+ +L
Sbjct: 495 VERRVGERALSSYVSVHAESGKVYALQPLDHEELEL 530
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 73/184 (39%), Gaps = 35/184 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------------NTDAASYFN 65
Y ++ + G + V A D D+ + LV Y L++ + ++ +
Sbjct: 460 YTVFVKENNLPGCHIFTVSAQDTDAQENALVSYSLVERRVGERALSSYVSVHAESGKVYA 519
Query: 66 LDPA-------TEHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQS--------LPYE 108
L P + Q +D G L S T+ + V D ND P+ + + E
Sbjct: 520 LQPLDHEELELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPKLLTPRIGGSGHMVTE 579
Query: 109 FSVPEGQDGLAVGRVHATDADEGQNAVVYYSV-PED----IPFVVDANTGDIRTNKALDY 163
G V +V A D+D G NA + Y + P + PF V TG+I T +ALD
Sbjct: 580 LVPRSVGAGHVVAKVRAVDSDSGYNAWLSYELEPTEGNARSPFRVGLYTGEICTTRALDE 639
Query: 164 EKQQ 167
E Q
Sbjct: 640 EDAQ 643
Score = 38.9 bits (89), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 56/145 (38%), Gaps = 31/145 (21%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEY---RLLDNNTDAASYFNLDPATEHQGPIQDEGGLS- 83
E G T++++ A+D+D G + Y RL+ T F++D T G I +G L
Sbjct: 256 ENGTTVIRLNASDRDEGANAAISYSFNRLVP--TMIIDQFSIDANT---GEIVIQGNLDF 310
Query: 84 ---------------------STATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVG 121
TV IRV D ND P+ V E Q G +
Sbjct: 311 EQVNLYKIRVDATDKGHPPMVGHCTVLIRVLDKNDNAPQIALTSLSLPVREDAQFGTVIA 370
Query: 122 RVHATDADEGQNAVVYYSVPEDIPF 146
+ D D G N V S+ DIPF
Sbjct: 371 LISVNDLDSGANGQVMCSLTPDIPF 395
>gi|444730891|gb|ELW71262.1| Cadherin-19, partial [Tupaia chinensis]
Length = 777
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 85/187 (45%), Gaps = 45/187 (24%)
Query: 19 YGAMARDKHELGVTLMQVKATDKD---SGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
Y A+ + G ++QV A+D D SG + Y LL YF+++P T
Sbjct: 158 YEAIVPEMSPEGTFVIQVTASDADDPSSGNNARLLYSLLQ----GQPYFSIEPTTGVIRI 213
Query: 71 --EHQGPIQDE--------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
+ +QDE G LS T +V ++++D+ND P F+ Y +VPE
Sbjct: 214 SSQMDRELQDEYWVIVQAKDMIGQPGALSGTTSVLVKLSDLNDNKPIFKESLYRLTVPES 273
Query: 115 Q-DGLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTN-----------KALD 162
G ++G++ A D D GQNA + YS+ ED D+ DI TN K LD
Sbjct: 274 APTGTSIGKIMAHDNDIGQNAEMDYSIEED-----DSQAFDIITNNETQEGIVVLKKKLD 328
Query: 163 YEKQQLY 169
+E Q Y
Sbjct: 329 FEYQNHY 335
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
IRV+DIND P+F PYE VPE +G V +V A+DAD+ G NA + YS+ + P
Sbjct: 141 IRVSDINDNEPKFLDEPYEAIVPEMSPEGTFVIQVTASDADDPSSGNNARLLYSLLQGQP 200
Query: 146 -FVVDANTGDIRTNKALDYEKQQLYL 170
F ++ TG IR + +D E Q Y
Sbjct: 201 YFSIEPTTGVIRISSQMDRELQDEYW 226
>gi|301621404|ref|XP_002940045.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Xenopus
(Silurana) tropicalis]
Length = 5753
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 93/192 (48%), Gaps = 34/192 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD---AASYFNLDPAT----- 70
Y A + ++ G ++ ++A DKD+ + G V Y ++ +NT+ + SY +++P T
Sbjct: 1256 YIAFVPENNQPGASIYSIQAIDKDTEENGKVFYSIITSNTEDISSTSYISINPVTGIIYA 1315
Query: 71 ------------EHQGPIQDEGG--LSSTATVNIRVTDINDK-------NPEFQSLPYEF 109
E Q +D G L+S+A V I V D ND +P+ S YE
Sbjct: 1316 QRSFDYEQDREFEIQVMAKDNGSPPLNSSAIVRICVVDQNDNSPTVLYPSPDVGSAAYEM 1375
Query: 110 SVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQ 166
+ G V +V A DAD G NA + Y +D F++D TG+IRT++ ++++
Sbjct: 1376 VPFSSEQGSLVTKVVAVDADSGHNAWLSYHFLQDSETSHFIIDQYTGEIRTSRV--FQER 1433
Query: 167 QLYLERVFLISK 178
+ +V +I K
Sbjct: 1434 DVLRHKVVVIVK 1445
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 92/193 (47%), Gaps = 35/193 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD---AASYFNLDPAT----- 70
Y A + ++ G ++ ++A DKD+ + G + Y ++ +NT+ + SY +++P T
Sbjct: 888 YIAYVSENNQPGASIYSIQAIDKDTEENGKLFYSIITSNTEEISSTSYISINPVTGVIYA 947
Query: 71 ------------EHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQ--------SLPYE 108
E Q +D G ++S+A V I V D ND +P S YE
Sbjct: 948 QRSFDYEEDREFEIQIMAKDNGSPSMNSSAIVRICVVDQNDNSPTVLYPSPDVGGSAAYE 1007
Query: 109 FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEK 165
+ G V +V A DAD G NA + Y +D F++D TG+IRT++ +++
Sbjct: 1008 MVPFSSEQGTLVTKVVAVDADSGHNAWLSYHFLQDSETSRFIIDQYTGEIRTSQV--FQE 1065
Query: 166 QQLYLERVFLISK 178
+ + +V +I K
Sbjct: 1066 RDVLRHKVVVIVK 1078
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 34/180 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTD---AASYFNLDPATE---HQGPI------- 76
G ++ QV+A+D D + Y +++ NTD +SY +++ T Q P
Sbjct: 2070 GSSVFQVQASDPDLDDNAKITYSIMNTNTDNFPVSSYISINSMTGILYAQRPFDYEQLRE 2129
Query: 77 -------QDEGG--LSSTATVNIRVTDINDKNPEF--------QSLPYEFSVPEGQDGLA 119
+D G L+ST TV I +TD+ND +P+ S +E G
Sbjct: 2130 FGIQVMAKDNGSPPLNSTTTVTICITDLNDNSPKILYPSTSADDSAQFEIVPRTSNKGEL 2189
Query: 120 VGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
V +V A DAD G NA + Y V E + F + +TG+IRT + EK+ L V L+
Sbjct: 2190 VAKVVAVDADSGHNAWLSYEFLQVSESMSFTISRHTGEIRTLRVFP-EKETLKQRLVVLV 2248
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ--DGLAVGRVHATDADEGQNAVVYYSV 140
+ TA + I +TD+ND P F Y ++PE D L + ++ATDADEG N + YS
Sbjct: 3422 TGTAIIKISITDVNDNTPMFSKEVYPVNLPENAPVDTLVIC-LNATDADEGVNGHILYSF 3480
Query: 141 PE-----DIPFVVDANTGDIRTNKALDYEKQQLY 169
F +D++TG+IRT LD+E + Y
Sbjct: 3481 SHISKIAQQTFTIDSHTGEIRTKGTLDFEITKAY 3514
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 21/158 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI------------- 76
++Q+ ATD D G G + Y L + A F +D T +G +
Sbjct: 1863 VIQMNATDADEGVNGHITYYLSRISKAAQQKFTIDTETGEIRTKGTLDFETTKAYEMIVE 1922
Query: 77 -QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNA 134
QD GGL S A V I++ D ND PE S+PE G + ++ D D G+N
Sbjct: 1923 AQDGGGLFSNAKVVIQIVDANDNAPEIILTSVSNSIPENSVPGTVIALINIRDIDSGENG 1982
Query: 135 VVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
VY + + +PF + +++ + + T + LD E+ Y
Sbjct: 1983 NVYCQITDLLPFEITSSSSNYFRLLTTRNLDREEMHEY 2020
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 74/176 (42%), Gaps = 33/176 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-- 76
Y + + LG ++ QV+A+D D + + Y ++ NTDA F+ G +
Sbjct: 2864 YVVYVPENNPLGFSIFQVQASDPDLDENAKITYSIVSKNTDAFPVFSCVSINSMSGVLYA 2923
Query: 77 ------------------QDEGG--LSSTATVNIRVTDINDKNPEF--------QSLPYE 108
+D G L+ST + I +TD+ND +P+ S +E
Sbjct: 2924 QCSFDYEQLREINIEVEAKDNGSPPLNSTTIIKIYITDLNDNSPKILYPATGVDNSAMFE 2983
Query: 109 FSVPEGQDGLAVGRVHATDADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKAL 161
G V +V A DAD G NA + Y V E F + +TG+IRT +A
Sbjct: 2984 VVPRSSNKGDLVTKVVAVDADSGHNAWLSYQFLQVSEPSAFTIAQHTGEIRTLRAF 3039
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 70/161 (43%), Gaps = 27/161 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
++ + ATD+D G G V Y + A F++D T G I+
Sbjct: 4279 VIDMNATDEDEGVNGHVTYSFSHISKIAEQTFSIDSQT---GEIRTREELDFEVTKAYVM 4335
Query: 78 -----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEG 131
D GGL S A V I++ D ND PE S+PE G V ++ D D G
Sbjct: 4336 NVEAADGGGLVSHAKVIIQIVDANDNAPEITLTSVSNSIPENSVPGTVVALINIRDVDSG 4395
Query: 132 QNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
+NA VY + + +PF + +++ + + T LD E Q Y
Sbjct: 4396 ENANVYCHITDSLPFELTSSSSNYYKLLTTSTLDREAMQEY 4436
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 67/158 (42%), Gaps = 21/158 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI------------- 76
++ + ATD+D G G + Y L A F +D T +G +
Sbjct: 2668 VVHLNATDEDEGVNGQITYSLSHITKAAQEKFTIDSQTGEIRTKGTLDFESIKAFEMIVE 2727
Query: 77 -QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNA 134
QD GGL S A V I + D ND PE S+PE G + ++ D D G+N
Sbjct: 2728 AQDGGGLFSNAKVVIHIVDANDNAPEIIITSVSNSIPEDSSPGTVIALINIRDIDSGENG 2787
Query: 135 VVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
VY + +PF + +++ + + T LD EK Y
Sbjct: 2788 KVYCEIIGPLPFEITSSSSNYFRLLTTSPLDREKIHRY 2825
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE-- 142
A + I V D+ND P F Y+ S+ EG V ++ATD DEG N V YS
Sbjct: 4244 AVIKIIVIDVNDNVPMFSKELYQVSLTEGVPVNTLVIDMNATDEDEGVNGHVTYSFSHIS 4303
Query: 143 ---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ F +D+ TG+IRT + LD+E + Y+ V
Sbjct: 4304 KIAEQTFSIDSQTGEIRTREELDFEVTKAYVMNV 4337
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 61/128 (47%), Gaps = 12/128 (9%)
Query: 48 LVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPY 107
LV R LD +A L T G I G+S + I ++DIND +P F Y
Sbjct: 1796 LVLERPLDREKQSALQIIL---TALDGGIPARTGIS---MIKIIISDINDNSPLFSQELY 1849
Query: 108 EFSVPEGQD-GLAVGRVHATDADEGQNA-VVYY----SVPEDIPFVVDANTGDIRTNKAL 161
+ S+ E V +++ATDADEG N + YY S F +D TG+IRT L
Sbjct: 1850 QVSLTESAPVNTLVIQMNATDADEGVNGHITYYLSRISKAAQQKFTIDTETGEIRTKGTL 1909
Query: 162 DYEKQQLY 169
D+E + Y
Sbjct: 1910 DFETTKAY 1917
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 35/182 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTD---AASYFNLDPATE---HQGPI------- 76
G +L QV+A+D D + + + +++ N D ++Y +++ T Q P
Sbjct: 4486 GSSLFQVQASDPDLNENAKIIFSIVNKNGDDFPVSAYVSINSMTGVLYAQRPFDYEQMRE 4545
Query: 77 -------QDEGG--LSSTATVNIRVTDINDKNPEF--------QSLPYEFSVPEGQDGLA 119
+D G L+STATV I +TDIND +P+ S +E G
Sbjct: 4546 FNVQVMAKDNGSPPLNSTATVKICITDINDNSPKILYPSTGVDDSTVFEIVPQSSNKGDL 4605
Query: 120 VGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
V +V A DAD G NA + Y E F + +TG+IRT + +++++ +V ++
Sbjct: 4606 VAKVVAVDADSGHNAWLSYQFLQPSEPSYFSIGRHTGEIRTLRV--FQEKETTKHKVIVL 4663
Query: 177 SK 178
K
Sbjct: 4664 VK 4665
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 65/161 (40%), Gaps = 27/161 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI---------------- 76
++ + ATD D G G + Y + A F +D H G I
Sbjct: 3460 VICLNATDADEGVNGHILYSFSHISKIAQQTFTID---SHTGEIRTKGTLDFEITKAYEM 3516
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEG 131
QD GGL S V I+V D ND PE S+PE G V + D D G
Sbjct: 3517 IVEAQDGGGLFSHTKVVIQVLDTNDNAPEIILTSVSNSIPEDSLPGTVVALIDIQDMDSG 3576
Query: 132 QNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
+N VY + + +PF + +++ + + T LD E+ Y
Sbjct: 3577 ENGNVYCQITDSLPFALTSSSSNYYTLVTTGTLDREEMPEY 3617
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 71/170 (41%), Gaps = 37/170 (21%)
Query: 29 LGVTLMQVKATDKDSGKFG----------------------LVEYRLLDNNTDAASYFNL 66
+G T++ D+DSGK G L+ +LLD D +L
Sbjct: 5179 IGTTVLLFSVKDQDSGKNGEVNVQISPNLPFEIISVQNHYSLITNQLLDRELDDQYTIHL 5238
Query: 67 DPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHA 125
P+Q E ATV++++TD ND P F+ L + E + G + V A
Sbjct: 5239 TARDLGLPPLQTE------ATVDLKITDTNDNPPTFEQLSAGVYINENNKPGALLYAVSA 5292
Query: 126 TDADEGQNAVVYYSV--------PEDIPFVVDANTGDIRTNKALDYEKQQ 167
+D DE +NA V YS+ P +D + G I ++ D+E+ Q
Sbjct: 5293 SDRDEAENAQVEYSIHNGFIDGSPISSFVYIDKHNGKIYAQQSFDHEEMQ 5342
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 25/174 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-- 76
Y R+ + ++ V A+DKD G + Y T+ F ++P I
Sbjct: 678 YKVNIRENIPINSLVLYVNASDKDEGINAQITYSFGTAATNVLRIFTINPNNGEIKTIGN 737
Query: 77 ---------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD---GL 118
+D G L + A V I +TD ND PE + P +D G
Sbjct: 738 VDFEEEKYYDISVQAEDHGSLVANAKVLIEITDENDNAPEISVT--SITTPISEDSAPGT 795
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
V + A D D G+N V + PF + ++TG+ I T ALD E+ Y
Sbjct: 796 VVALIKAHDLDSGENGEVDCEIIGVGPFKLLSSTGNFYKIVTTSALDRERSSHY 849
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 26/162 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLD-----NNTDAASYF------NLDPATEHQGPIQ- 77
G + + D DSG+ G V ++ D + +++YF NLD H+ I
Sbjct: 1965 GTVIALINIRDIDSGENGNVYCQITDLLPFEITSSSSNYFRLLTTRNLDREEMHEYNITI 2024
Query: 78 ---DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEG 131
D G LS+T T+ + + D+ND P F Y +PE G +V +V A+D D
Sbjct: 2025 KATDRGSPSLSTTKTIKLVLLDVNDNPPVFGQASYVVYIPENNPSGSSVFQVQASDPDLD 2084
Query: 132 QNAVVYYSV--------PEDIPFVVDANTGDIRTNKALDYEK 165
NA + YS+ P +++ TG + + DYE+
Sbjct: 2085 DNAKITYSIMNTNTDNFPVSSYISINSMTGILYAQRPFDYEQ 2126
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 34/180 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTD---AASYFNLDPATE---HQGPI------- 76
G ++ QV+A+D D + Y + N +SY +L+ T Q P
Sbjct: 3667 GSSIFQVQASDPDLDNNAKIVYSTVHKNASDVPVSSYISLNSITGVLYAQRPFDYEQMRE 3726
Query: 77 -------QDEGG--LSSTATVNIRVTDINDKNPEF--------QSLPYEFSVPEGQDGLA 119
+D G L+ST V I VTD ND +P+ S +E G
Sbjct: 3727 FTIQIMAKDNGSPPLNSTVIVKICVTDRNDNSPKILYPSSVVEDSAQFEIVPRSANKGEL 3786
Query: 120 VGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
+ +V A DAD G NA + Y E F + +TG+IRT + EK+ + + + L+
Sbjct: 3787 IAKVVAVDADSGHNAWLSYEFLQGSEPSYFTIGRHTGEIRTLRVFQ-EKESMRHKVIVLV 3845
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 26/166 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVE--------YRLLDNNTD-----AASYFNLDPATEHQGPI 76
G + +KA D DSG+ G V+ ++LL + + S + + ++ + I
Sbjct: 794 GTVVALIKAHDLDSGENGEVDCEIIGVGPFKLLSSTGNFYKIVTTSALDRERSSHYNITI 853
Query: 77 Q--DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEG 131
Q D+G LS T+ + V DIND P FQ+ Y V E Q G ++ + A D D
Sbjct: 854 QATDKGSPPLSFRKTIRLDVLDINDNPPVFQTSTYIAYVSENNQPGASIYSIQAIDKDTE 913
Query: 132 QNAVVYYSV----PEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
+N ++YS+ E+I ++ TG I ++ DYE+ + +
Sbjct: 914 ENGKLFYSIITSNTEEISSTSYISINPVTGVIYAQRSFDYEEDREF 959
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY--- 138
S T ++I V D ND P F S Y+ + E V ++HA D+DEG N + Y
Sbjct: 5037 SGTILISIIVLDSNDNPPVFDSAVYKIGLKENSPYNTLVIQLHADDSDEGPNGEISYYYE 5096
Query: 139 -SVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+ E+I F +D TG+I +DYE Q+ Y
Sbjct: 5097 DQISENIANVFSLDQQTGEICVQGKVDYEYQRSY 5130
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 26/171 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDN-----NTDAASYFNL--------DPATEHQGPI 76
G + + D DSG+ G V ++ D+ + +++Y+ L + E+ I
Sbjct: 3562 GTVVALIDIQDMDSGENGNVYCQITDSLPFALTSSSSNYYTLVTTGTLDREEMPEYNITI 3621
Query: 77 Q--DEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEG 131
+ D G L S+T T+ + + D+ND P F+ Y +PE G ++ +V A+D D
Sbjct: 3622 KATDRGSLPLSTTKTIRLVILDVNDNAPIFEQPSYVVYIPENNPSGSSIFQVQASDPDLD 3681
Query: 132 QNAVVYYSV----PEDIP----FVVDANTGDIRTNKALDYEKQQLYLERVF 174
NA + YS D+P +++ TG + + DYE+ + + ++
Sbjct: 3682 NNAKIVYSTVHKNASDVPVSSYISLNSITGVLYAQRPFDYEQMREFTIQIM 3732
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 18/132 (13%)
Query: 51 YRLLDNNT---DAASYFNLD-PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLP 106
Y+LL +T +A +N+ AT+ P LS+T T+ + + D+ND P F
Sbjct: 4420 YKLLTTSTLDREAMQEYNITIKATDRGSP-----PLSTTKTIRLLIQDVNDNPPVFDQTK 4474
Query: 107 YEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVP----EDIP----FVVDANTGDIRT 157
Y +PE G ++ +V A+D D +NA + +S+ +D P +++ TG +
Sbjct: 4475 YVVYIPENNPSGSSLFQVQASDPDLNENAKIIFSIVNKNGDDFPVSAYVSINSMTGVLYA 4534
Query: 158 NKALDYEKQQLY 169
+ DYE+ + +
Sbjct: 4535 QRPFDYEQMREF 4546
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 13/104 (12%)
Query: 79 EGGLSSTATV----NIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQN 133
+G L+ A V + V+DIND P F+ Y VPE Q G ++ + A D D +N
Sbjct: 1224 QGALAYAAVVEKIIRLEVSDINDNPPVFEKSTYIAFVPENNQPGASIYSIQAIDKDTEEN 1283
Query: 134 AVVYYSV----PEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
V+YS+ EDI ++ TG I ++ DYE+ + +
Sbjct: 1284 GKVFYSIITSNTEDISSTSYISINPVTGIIYAQRSFDYEQDREF 1327
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
A++ P+Q + T + I VTD ND P F Y+ ++ E V V+++D
Sbjct: 181 ASDGGNPVQ-----TGTTLIKIIVTDFNDNVPVFTQEVYKVNIHENIPINSTVLHVNSSD 235
Query: 128 ADEGQNAVVYYSVPEDIP-----FVVDANTGDIRTNKALDYEKQQLY 169
DEG NA + YS F ++ N G+I+T +D+E+ + Y
Sbjct: 236 KDEGINAQITYSFSTAATNVLRMFTINPNNGEIKTKGNVDFEETKYY 282
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
A++ P+Q + T + I VTD ND P F Y+ ++ E V V+A+D
Sbjct: 645 ASDGGNPVQ-----TGTTLIKIIVTDFNDNFPVFTQEVYKVNIRENIPINSLVLYVNASD 699
Query: 128 ADEGQNAVVYYSVPEDIP-----FVVDANTGDIRTNKALDYEKQQLY 169
DEG NA + YS F ++ N G+I+T +D+E+++ Y
Sbjct: 700 KDEGINAQITYSFGTAATNVLRIFTINPNNGEIKTIGNVDFEEEKYY 746
Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 64/159 (40%), Gaps = 21/159 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPI------------ 76
T++ V ++DKD G + Y T+ F ++P + +G +
Sbjct: 227 TVLHVNSSDKDEGINAQITYSFSTAATNVLRMFTINPNNGEIKTKGNVDFEETKYYDISI 286
Query: 77 --QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQN 133
+D GGL + A V I + D ND PE + E G V + A D D G+N
Sbjct: 287 QAEDGGGLVAHAKVLIEIIDENDNVPEISITSITTPISEDSASGTLVALIEAHDLDSGEN 346
Query: 134 AVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
V + PF + + +G+ I T LD E+ Y
Sbjct: 347 GEVDCQIIGVGPFKLLSTSGNFYKIVTTSTLDRERSSHY 385
Score = 38.9 bits (89), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 77/184 (41%), Gaps = 34/184 (18%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH 72
T + L G + ++ G L V A+D+D + VEY + + D + + +H
Sbjct: 5267 TFEQLSAGVYINENNKPGALLYAVSASDRDEAENAQVEYSIHNGFIDGSPISSFVYIDKH 5326
Query: 73 QGPI--------------------QDEGG--LSSTATVNIRVTDINDKNPEF------QS 104
G I +D G LSS T+++ + D ND P Q
Sbjct: 5327 NGKIYAQQSFDHEEMQHVEFTVTAEDFGSPKLSSNITIHLYILDENDNYPTILFPQASQH 5386
Query: 105 LPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNK 159
L +P+ G V +V A DAD G NA + Y++ E D+ + + +TG+I+ +
Sbjct: 5387 LQSPQIIPKALPAGSLVTKVVAVDADSGYNAWLTYNLTEVSSLDL-YKIIPHTGEIKLVR 5445
Query: 160 ALDY 163
+ Y
Sbjct: 5446 NIQY 5449
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 23/178 (12%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-NTDAASYFNLDPATEH- 72
DS Y ++ ++Q+ A D D G G + Y D + + A+ F+LD T
Sbjct: 5057 DSAVYKIGLKENSPYNTLVIQLHADDSDEGPNGEISYYYEDQISENIANVFSLDQQTGEI 5116
Query: 73 --QGPI--------------QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
QG + +D G + V + + D+ND P + S+PE
Sbjct: 5117 CVQGKVDYEYQRSYEISVIARDHGVPEMEGHCIVQVDIEDLNDNAPAITLSSFVSSIPED 5176
Query: 115 QD-GLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDA--NTGDIRTNKALDYEKQQLY 169
G V D D G+N V + ++PF + + N + TN+ LD E Y
Sbjct: 5177 TPIGTTVLLFSVKDQDSGKNGEVNVQISPNLPFEIISVQNHYSLITNQLLDRELDDQY 5234
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 92 VTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
++D+ND +P F Y VPE G ++ +V A+D D +NA + YS+
Sbjct: 2849 ISDVNDNSPAFGQTSYVVYVPENNPLGFSIFQVQASDPDLDENAKITYSI 2898
>gi|405951763|gb|EKC19648.1| Protocadherin-9 [Crassostrea gigas]
Length = 1002
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
Q + LS +ATV I V D ND P F Y F+V E G VG ++ATD DEG+NAV
Sbjct: 539 QGDPALSGSATVIISVLDKNDNEPMFNQSRYTFTVNENAPAGSQVGILYATDQDEGENAV 598
Query: 136 VYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ ++ P+ +PF + G I+T++ LD E Q Y
Sbjct: 599 ITFTGPDSVPFTIFPG-GYIKTDRVLDREVQNRY 631
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 10/109 (9%)
Query: 72 HQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
H + +GG LS T VNI ++D+ND +P+F Y V E + + + ATD
Sbjct: 211 HFSVVARDGGSPPLSGTLKVNITISDVNDNSPKFSQSVYYIEVKESVNVSSVILTLRATD 270
Query: 128 ADEGQNAVVYYSVPED------IPFVVDANTGDIRTNKALDYEKQQLYL 170
D+G+N V+Y + F +D +TGD+ K L Y K + ++
Sbjct: 271 LDDGKNGKVFYRLSPHQSETVLTSFAIDNSTGDLSVIKPLKYVKGEQHV 319
Score = 38.9 bits (89), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+++ + + + D ND P F Y + E + G + V A DAD+ NA + YS+
Sbjct: 440 LNTSDSFYVEIEDENDNAPIFDLSVYTAGIMENNNVGDVIVHVQANDADDKNNADLLYSL 499
Query: 141 PE--DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
E + F +D +G IRT LD E Y V +I++
Sbjct: 500 SESNNGMFYIDEKSGIIRTQARLDRENVSSY--SVIVIAR 537
>gi|390480000|ref|XP_003735826.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-11 X-linked-like
[Callithrix jacchus]
Length = 1386
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 76/162 (46%), Gaps = 26/162 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------------ 77
G L +V ATD DSG G + Y L TDA F+LD T ++
Sbjct: 521 GAQLTKVSATDIDSGPNGEISYLL---GTDAPPEFDLDRRTGMLTAVKKLDREKQEKYLF 577
Query: 78 -----DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--QDGLAVGRVHATDA 128
D G L+S +V + V D ND +P F Y F VPE + G VG + TD
Sbjct: 578 TILAKDNGVPPLTSNVSVFVNVLDQNDNSPVFTHNEYNFYVPENLPRHG-TVGLITVTDP 636
Query: 129 DEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLY 169
D G+N+ V SV + F +D+ TG IR N + D EKQ+ Y
Sbjct: 637 DYGENSAVTLSVLDMKDSFTIDSQTGVIRPNISFDREKQESY 678
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
SSTA + + VTDIND +P F+ E S+PE G +V ++HATDAD G+NA +++
Sbjct: 269 SSTAILQVSVTDINDNHPVFKEEEIEVSIPESAPVGTSVTQLHATDADIGENARIHFYFS 328
Query: 142 EDIP------FVVDANTGDIRTNKALDYEK 165
+ F ++A TG I + LD E+
Sbjct: 329 SLVSNTAKRLFHLNATTGLITIKEPLDREE 358
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
L+ ++ + I++ D ND P F SVPE G + +V ATD D G N + Y +
Sbjct: 485 LNESSMLLIKLKDENDNTPVFTQSFVSLSVPENNFPGAQLTKVSATDIDSGPNGEISYLL 544
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLYL 170
D P F +D TG + K LD EKQ+ YL
Sbjct: 545 GTDAPPEFDLDRRTGMLTAVKKLDREKQEKYL 576
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 36/77 (46%), Gaps = 11/77 (14%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLP----YEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
SS+A V I V D+ND P F P YE +P V +V A D D G NA + Y
Sbjct: 693 SSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPSTNPDTEVFKVIAVDNDTGLNAEIRY 752
Query: 139 SVPEDIPFVVDANTGDI 155
S +V NT D+
Sbjct: 753 S-------IVGGNTRDL 762
>gi|47216563|emb|CAG04741.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1641
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 74/159 (46%), Gaps = 30/159 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGPIQDE------ 79
LG T+++V ATD DSG F +EY L+ D F + P+T P+ E
Sbjct: 736 LGTTIVRVSATDADSGLFAAIEYSLV----DGEGKFAIRPSTGEIYILSPLDRETKDHYT 791
Query: 80 ---------GG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVH 124
GG ++ V + V D+ND P F Y SV E + G +V V
Sbjct: 792 LTAVARDNPGGSPNNRRENSVQVLVTVLDVNDYRPRFTERTYNTSVFENEPSGTSVITVS 851
Query: 125 ATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKAL 161
ATD DEG+N V Y + P+ F +D NTG +R+ + L
Sbjct: 852 ATDLDEGENGAVLYRMLGPQSEAFTLDPNTGLVRSRRLL 890
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 78/168 (46%), Gaps = 32/168 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQ--------- 77
G +++ V ATD D G+ G V YR+L ++A F LDP T + +Q
Sbjct: 844 GTSVITVSATDLDEGENGAVLYRMLGPQSEA---FTLDPNTGLVRSRRLLQSSERFNLTV 900
Query: 78 ---DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSV----PEGQDGLAVGRVHATDA 128
D+G L TA + I V D+ND P F P ++ E GL V VHATDA
Sbjct: 901 VATDQGRPPLWGTADLIITVIDVNDNRPVFVR-PANGTIIHITEEQPPGLPVYEVHATDA 959
Query: 129 DEGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYEKQQLY 169
DEG N V Y + F +DA +G I T LD EKQ LY
Sbjct: 960 DEGVNGEVRYGFLQTGASNRDWENFHIDAISGVITTTVKLDREKQALY 1007
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 89/213 (41%), Gaps = 54/213 (25%)
Query: 4 CPIPSALEMTSDS------------------LFYGAMARDKHELGVTLMQVKATDKDSGK 45
CP P AL +TS + ++ G + + G + +KA+D+DSG
Sbjct: 143 CPNP-ALRLTSSTTVLVNVLDVNDVTPSFPRVYEGPFEVSEGQPGPRVWTLKASDEDSGL 201
Query: 46 FGLVEYRL-------------------------LDNNTDAASYFNLDPATEHQGPIQDEG 80
G VEY + LD T A ++N+ G
Sbjct: 202 NGKVEYSITGGDPQNEFMISPVEGELRVRKDVELDRETTA--FYNITVTARDLG----TP 255
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS 139
+S+ V + V DIND +P +LPY SV EG +V RV A DAD G+NA++ Y+
Sbjct: 256 SRNSSVLVGVMVRDINDNDPVILNLPYNTSVSEGAPIHTSVARVQAQDADSGRNALLTYN 315
Query: 140 VPEDI---PFVVDANTGDIRTNKALDYEKQQLY 169
+ F ++ +G + N+ LD E+ Y
Sbjct: 316 ITAGNLGGAFYINDTSGVVLVNRPLDRERVAEY 348
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 77/192 (40%), Gaps = 29/192 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-LDPATEHQG 74
+L Y + + ++ +V+A D DSG+ L+ Y + N A Y N
Sbjct: 279 NLPYNTSVSEGAPIHTSVARVQAQDADSGRNALLTYNITAGNLGGAFYINDTSGVVLVNR 338
Query: 75 PIQDEGGLSSTATVNIR-------------------VTDINDKNPEFQSLPYEFSVPEGQ 115
P+ E T T+ ++ + D ND P F Y + E
Sbjct: 339 PLDRERVAEYTLTITVKDNPENSRIARRDSDLLVITILDENDNRPVFTRTSYTAEIKENS 398
Query: 116 -DGLAV----GRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNK--ALDYEKQ 166
G V G V A D D G NAVV Y + F VDANTG +R N+ +LD E
Sbjct: 399 AAGTTVTVLNGPVLAKDNDTGANAVVKYKLLGARMNIFTVDANTGVVRVNQGSSLDREAF 458
Query: 167 QLYLERVFLISK 178
Q +FL+++
Sbjct: 459 QEPWVELFLVAE 470
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 82/185 (44%), Gaps = 28/185 (15%)
Query: 19 YGAMARDKHELGVTLM----QVKATDKDSGKFGLVEYRLL---------DNNTDAASY-- 63
Y A ++ G T+ V A D D+G +V+Y+LL D NT
Sbjct: 390 YTAEIKENSAAGTTVTVLNGPVLAKDNDTGANAVVKYKLLGARMNIFTVDANTGVVRVNQ 449
Query: 64 -FNLD------PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ- 115
+LD P E +D GGL+S+ + + + D ND P F Y +PE
Sbjct: 450 GSSLDREAFQEPWVELFLVAEDIGGLNSSVPLTVAILDENDNPPVFSPSSYSVRLPENSP 509
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRT-NKALDYEKQQLYLER 172
G+ V ++ ATDAD G N + Y + F+V+ +G + N LD E++ Y R
Sbjct: 510 TGVVVTQLSATDADSGSNGWLMYRLESGAQDRFLVEPLSGAVLVGNITLDREERGSY--R 567
Query: 173 VFLIS 177
+ +I+
Sbjct: 568 LVVIA 572
Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD--GLAVGRVHATDADEGQNAVVYYS 139
L+ +T I V ND PEF Y + EG D G + V A D DEG+N + Y+
Sbjct: 40 LTPPSTTTIIVAIENDNAPEFPEEEYVTVLSEGPDTVGATIATVTAIDPDEGRNGSLRYA 99
Query: 140 VPEDI---PFVVDANTGDIRTNKALDYE 164
+ + F +D+ TG I K LD+E
Sbjct: 100 ISQGNLIETFHIDSITGRITAVKELDFE 127
Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 75/179 (41%), Gaps = 46/179 (25%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--FNLDPAT-----------EHQG-- 74
G+ + +V ATD D G G V Y L + F++D + E Q
Sbjct: 948 GLPVYEVHATDADEGVNGEVRYGFLQTGASNRDWENFHIDAISGVITTTVKLDREKQALY 1007
Query: 75 ----PIQDEGG---LSSTATVNIRVTDINDKNPEF-----QSLPYE-FSVPE-GQDGLAV 120
+D G +T + + + DI+D P F SLPY+ +V E G V
Sbjct: 1008 SLIIVARDMGQPVPYETTQPLQVALLDIDDNEPVFLKPPRGSLPYQKLTVLEHSPPGTVV 1067
Query: 121 GRV-HATDADEGQNAVVYYSVPEDIPFVVDANT---------GDIRTNKALDYEKQQLY 169
G V A DADEG NAVVYY F+ N+ G+++ K LD E+ +Y
Sbjct: 1068 GNVTRAVDADEGANAVVYY-------FIAGGNSDGNFGLSLDGELKVYKDLDREEIPVY 1119
Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 66/158 (41%), Gaps = 25/158 (15%)
Query: 33 LMQVKATDKDSGKF-GLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIR 91
++ V+A D + GL E +D +TD S L A Q PI E AT I
Sbjct: 637 IISVEAKDDGNNLVDGLQESFGIDLHTDNLSVGALPGAVFVQNPINRE----QVATFEII 692
Query: 92 VT------------------DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
V+ D+ND NP F Y+ V E G + RV ATDAD G
Sbjct: 693 VSVHDNASEVIDKSGSVPNVDVNDNNPVFLQPSYQEPVFENVALGTTIVRVSATDADSGL 752
Query: 133 NAVVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A + YS V + F + +TG+I LD E + Y
Sbjct: 753 FAAIEYSLVDGEGKFAIRPSTGEIYILSPLDRETKDHY 790
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 50/118 (42%), Gaps = 18/118 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTD---------AASYFNLDPATEHQGPIQ--- 77
GV + Q+ ATD DSG G + YRL D A N+ E +G +
Sbjct: 511 GVVVTQLSATDADSGSNGWLMYRLESGAQDRFLVEPLSGAVLVGNITLDREERGSYRLVV 570
Query: 78 ---DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
D G +S TAT+ + + D+ND P F +V E G+ V + A D D
Sbjct: 571 IATDRGTPPMSGTATLTVILDDVNDSRPRFIEPVTMINVNESTPPGVVVATLTAEDPD 628
>gi|296192953|ref|XP_002744295.1| PREDICTED: protocadherin alpha-6 [Callithrix jacchus]
Length = 819
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 72/147 (48%), Gaps = 13/147 (8%)
Query: 34 MQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVT 93
+ VK D+ + GL+ + LD DA ++ AT+ P L+ T + + V
Sbjct: 189 LDVKINSDDNKQIGLILKKSLDRE-DAPAHNLFLTATDGGKP-----ELTGTVQLLVTVL 242
Query: 94 DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------F 146
D+ND P F+ YE + E D G V R++A+D DEG N + YS +P F
Sbjct: 243 DVNDNAPTFEQSEYEVRIFENSDNGTTVIRLNASDRDEGVNGAISYSFNSLVPTMVVDQF 302
Query: 147 VVDANTGDIRTNKALDYEKQQLYLERV 173
+D NTG+I LD+E+ LY R+
Sbjct: 303 SIDPNTGEIVIRNNLDFEQVNLYKIRI 329
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
L +TA++++ V D+ND P F Y V E G + V A DAD +NA+V YS+
Sbjct: 444 LWATASLSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAQDADAHENALVSYSL 503
Query: 141 PED-------IPFV-VDANTGDIRTNKALDYEKQQL 168
E +V V A +G + + LD+E+ +L
Sbjct: 504 VERRVGNRALSSYVSVHAESGKVYALQPLDHEELEL 539
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 70/179 (39%), Gaps = 35/179 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN---NTDAASY----------FN 65
Y ++ + G + V A D D+ + LV Y L++ N +SY +
Sbjct: 469 YTVFVKENNPPGCHIFTVSAQDADAHENALVSYSLVERRVGNRALSSYVSVHAESGKVYA 528
Query: 66 LDPA-------TEHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFS------ 110
L P + Q +D G L S T+ + V D ND P + +
Sbjct: 529 LQPLDHEELELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPALLAPRVGGTGGAVSE 588
Query: 111 -VPEGQD-GLAVGRVHATDADEGQNAVVYYSV-----PEDIPFVVDANTGDIRTNKALD 162
VP G V +V A DAD G NA + Y + IPF V TG+I T + LD
Sbjct: 589 LVPRSVGAGYVVAKVRAVDADSGYNAWLSYELQPVASSARIPFRVGLYTGEISTTRVLD 647
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 67/169 (39%), Gaps = 34/169 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNN---TDAASYFNLDPATEHQGPI---------- 76
G T++++ A+D+D G G + Y N+ T F++DP T G I
Sbjct: 267 GTTVIRLNASDRDEGVNGAISYSF--NSLVPTMVVDQFSIDPNT---GEIVIRNNLDFEQ 321
Query: 77 ----------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
D+G ++ TV +RV D ND PE V E Q G + +
Sbjct: 322 VNLYKIRIDATDKGHPPMAGHCTVLVRVLDKNDNVPEIALTSLSLPVREDAQFGTVIALI 381
Query: 124 HATDADEGQNAVVYYSVPEDIPFVVDA---NTGDIRTNKALDYEKQQLY 169
D D G N V S+ +PF + + N + + ALD E Y
Sbjct: 382 SVNDLDSGANGQVTCSLTPHVPFKLVSTFRNYYSLVLDSALDRETVSAY 430
>gi|427798291|gb|JAA64597.1| Putative cadherin egf lag seven-pass g-type receptor, partial
[Rhipicephalus pulchellus]
Length = 3724
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 77/163 (47%), Gaps = 32/163 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQ----- 73
G ++ +++A D D G+ + + L ++ F+LD T EH
Sbjct: 819 GTSVARLRAADADQGRNAELHFIL------SSEQFHLDSETGLLTVKGPLDREHHDRHLL 872
Query: 74 ------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
G ++D LSSTATV+I V D+ND P F PY + E G V VHA
Sbjct: 873 TVTVADGALEDP--LSSTATVSIVVRDVNDNAPHFARAPYVVRIREDLPIGALVTSVHAE 930
Query: 127 DADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
DAD G N V YS+ + F VD +TG +R LD+E +LY
Sbjct: 931 DADFGDNGRVQYSLDTE-NFDVDPDTGLVRLAAMLDFETWRLY 972
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY 137
G L + ATV +RV D ND P F +P E + E + G + VHA D DE +N V
Sbjct: 431 RGRLQAVATVTVRVFDCNDHAPVFDPMPVEVLLDENRPVGTKIFTVHAHDEDEAENGYVS 490
Query: 138 YSVP--EDIPFVVDANTGDIRTNKALDYEK-QQLYLERV 173
YS+ +PF VD +G+I T + LDYE + Y+ R+
Sbjct: 491 YSLVNLNAVPFSVDPFSGEISTTEVLDYETMRHSYMLRI 529
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 76/175 (43%), Gaps = 22/175 (12%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---- 70
D L Y + E G + ++ A D D V Y ++ AA F +DP++
Sbjct: 2713 DVLAYKTAVAENAEQGCVVARLMAHDPDVA-LRKVTYEFYEDTDPAAEIFRVDPSSGVVT 2771
Query: 71 ------EHQGP-------IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQD 116
P ++D+G LSS+A V + V D+ND P F+ Y+ VPE
Sbjct: 2772 TRVALDREAVPFYNFTVRVRDDGLLSSSAWVYVEVLDVNDNPPVFEHSRYQLQVPEDAVA 2831
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
G V +H DAD V +Y + D+ F V + +GD+ + LD E Q Y
Sbjct: 2832 GTVVASLHIEDADRETAPVGFYVLSGDLGQQFAVRS-SGDVFVQRPLDREALQNY 2885
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 29/165 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------ 76
LG L ++A D D G G + Y + ++ D S F +D H G +
Sbjct: 713 LGSVLGYIQAKDPDHGYNGRLVYVI--SSGDQHSCFRVD---MHTGALLLVAALDYELAP 767
Query: 77 ----------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHA 125
Q + S++ T+ +RV D+ND P F+ Y F + E +G +V R+ A
Sbjct: 768 SHLLNVTAYDQGQPPRSTSQTMFVRVLDVNDNAPLFEKPAYSFVINEDAPNGTSVARLRA 827
Query: 126 TDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
DAD+G+NA +++ + + F +D+ TG + LD E +L
Sbjct: 828 ADADQGRNAELHFILSSE-QFHLDSETGLLTVKGPLDREHHDRHL 871
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 64/135 (47%), Gaps = 28/135 (20%)
Query: 60 AASYFNLDPATE----------------HQGPIQ--DEGGLSSTATVNIRVTDINDKNPE 101
AA++F LDP T H+ ++ + G S+ A V ++V D ND P
Sbjct: 1651 AANHFRLDPVTGVLTTGEEALDYERAAVHRLVVRATNLAGTSALARVTVQVLDCNDHAPH 1710
Query: 102 FQSLPYEFSVPEGQD-GLAVGR------VHATDADEGQNAVVYYSVPEDIP---FVVDAN 151
F+ L Y +V E G AV R V A D D G NA + +S+ E F +DAN
Sbjct: 1711 FRQLLYRGTVSEAAPAGSAVLRGSQPLVVAAHDEDTGINAQLTFSIVEAWARRLFRIDAN 1770
Query: 152 TGDIRTNKALDYEKQ 166
TG + ++LD E+Q
Sbjct: 1771 TGAVSLVQSLDREEQ 1785
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS-VPED 143
+++ + ++D+ND P F YE ++PE G V VHA D D G N + YS V D
Sbjct: 3002 SSIEVLLSDVNDNPPVFGQKAYELALPEDTPAGRLVAHVHALDRDLGVNRRLSYSFVQAD 3061
Query: 144 IPFVVDANTGDIRTNKALDYEK 165
F +DA++G +R + LD E+
Sbjct: 3062 GHFSIDAHSGLVRLEQPLDREQ 3083
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 59/131 (45%), Gaps = 27/131 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGP 75
Y A + G ++QV+A+D DSG G + Y LL F+LDPAT GP
Sbjct: 3231 YSATVTEDASPGQLVLQVQASDADSG--GELRYTLLHPGP-----FSLDPATGQLSVAGP 3283
Query: 76 IQDE-------------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGL 118
+ E GG LS+ A V++ V D+ND P F Y V EG Q G
Sbjct: 3284 LDRETVSRYVLEVECWDGGTPPLSAQALVHVEVLDVNDHPPRFDQSNYTAVVHEGRQAGW 3343
Query: 119 AVGRVHATDAD 129
V R +DAD
Sbjct: 3344 TVLRFSLSDAD 3354
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 25/158 (15%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQGPIQDEG 80
+KAT +D G + Y L+ N +F+++P T +Q ++
Sbjct: 3144 IKATSRDVGVNAQITYALVAGND--MGHFSIEPKTGVLRVARPLDYEETPSYQLAVEARD 3201
Query: 81 G----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAV 135
G LS+ A +N+ V D ND P F PY +V E G V +V A+DAD G
Sbjct: 3202 GGEPPLSARAWLNVSVLDANDNAPVFGG-PYSATVTEDASPGQLVLQVQASDADSGGE-- 3258
Query: 136 VYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ Y++ PF +D TG + LD E Y+ V
Sbjct: 3259 LRYTLLHPGPFSLDPATGQLSVAGPLDRETVSRYVLEV 3296
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 20/131 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A+ + G + ++ ATD D G G + Y + + D A +F+++ T
Sbjct: 2422 YEAVVAENMLPGARVARLSATDPDQGVLGRLTYAI--RSRDCALHFHINSTTGELVTQEP 2479
Query: 71 ---EHQG----PIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAV 120
EH+ P+ D GG + A V + VTD+ND P F + YE S+ G +
Sbjct: 2480 LDHEHRHLYEVPVSATDGGGRLAFAVVRVAVTDVNDNEPTFGAAEYEVSIWTNTSVGTTL 2539
Query: 121 GRVHATDADEG 131
+V A D D+G
Sbjct: 2540 LKVRAFDQDQG 2550
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY 137
+G ++A V++ V D ND P F Y+ V E G + ++ ATDADE Q ++
Sbjct: 1379 DGSAKASAMVHVEVLDANDNWPVFSESLYQVEVSESSSPGTEILQLTATDADEDQR--LF 1436
Query: 138 YS------VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
YS V + FV+D++TG + LD+E Q +L
Sbjct: 1437 YSIHNSEQVTSNSYFVLDSDTGVLSLALPLDHEASQQHL 1475
Score = 42.7 bits (99), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 20/131 (15%)
Query: 30 GVTLMQVKATDKD-----------SGKFGLVEYRLLDNNTDAASY-FNLDPATEHQG--- 74
G ++Q+ ATD D S + Y +LD++T S LD Q
Sbjct: 1418 GTEILQLTATDADEDQRLFYSIHNSEQVTSNSYFVLDSDTGVLSLALPLDHEASQQHLLT 1477
Query: 75 -PIQDEGGLSST---ATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDAD 129
++D GG + A V + VTD ND PEF YE V E G A+ ++ A D D
Sbjct: 1478 VAVRDSGGPVTRRGFARVRVLVTDHNDHAPEFLQARYEVRVSETAAPGTALLQLGALDRD 1537
Query: 130 EGQNAVVYYSV 140
G NA++ +S+
Sbjct: 1538 RGPNALLTFSI 1548
Score = 42.7 bits (99), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYS 139
GL++ V + V D ND P F L Y+ +V E + G V R+ A D D V Y
Sbjct: 2691 GLATAFDVTVHVLDDNDCEPVFDVLAYKTAVAENAEQGCVVARLMAHDPDVALRKVTYEF 2750
Query: 140 VPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
+ P F VD ++G + T ALD E Y
Sbjct: 2751 YEDTDPAAEIFRVDPSSGVVTTRVALDREAVPFY 2784
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVY 137
+G S + + V N+ +P F YE V E G V R+ ATD D+G +
Sbjct: 2394 DGVYQSYTQLRLVVKASNEHSPRFSQSVYEAVVAENMLPGARVARLSATDPDQGVLGRLT 2453
Query: 138 YSVPED---IPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ + F +++ TG++ T + LD+E + LY
Sbjct: 2454 YAIRSRDCALHFHINSTTGELVTQEPLDHEHRHLY 2488
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 68/158 (43%), Gaps = 19/158 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD-PATEH---QG 74
Y +A DK Q KA + G F L+ R T++ S N + T H +G
Sbjct: 61 YKIVAGDKER------QFKAESRLVGDFWLLFIR---ARTESTSTLNREYEDTYHLRVKG 111
Query: 75 PIQDEGGLSST----ATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV-GRVHATDAD 129
+ D L V IRVTD ND +P F Y +VPE V +++A D D
Sbjct: 112 SVHDTLHLRRLPDVYCEVLIRVTDKNDLSPLFFPTWYNVTVPEDTPIHNVLVKLNAYDPD 171
Query: 130 EGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQ 166
G N +YY + E F V G + + LD++K+
Sbjct: 172 MGVNGEIYYRLLEPSRQFAVHPTMGTVLLTRPLDFQKK 209
Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 70/167 (41%), Gaps = 34/167 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G + V A D+D G V RL + A +F++D H G +
Sbjct: 3034 GRLVAHVHALDRDLG----VNRRLSYSFVQADGHFSID---AHSGLVRLEQPLDREQCAR 3086
Query: 77 -------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAV-GRVHA 125
QD G L+S + + V DIND PEF Y +V E G + + A
Sbjct: 3087 FNLTVQAQDHGQPPLASRTHLAVTVQDINDSPPEFTQQMYAAAVSEVAPVGSPISAAIKA 3146
Query: 126 TDADEGQNAVVYYSV--PEDI-PFVVDANTGDIRTNKALDYEKQQLY 169
T D G NA + Y++ D+ F ++ TG +R + LDYE+ Y
Sbjct: 3147 TSRDVGVNAQITYALVAGNDMGHFSIEPKTGVLRVARPLDYEETPSY 3193
Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSV--PEGQDGLAVGRVHATDADEGQNAVVYYSVPE- 142
A + + V D ND P F + PY +SV Q G V +V A D D+G N V YS+ E
Sbjct: 2005 ALLRVHVMDANDNAPIFVNRPY-YSVITVSAQPGDLVFKVKAIDLDDGPNGQVLYSLHEG 2063
Query: 143 -DIPFVVDANTGDIR 156
F VD ++G+IR
Sbjct: 2064 DSHLFDVDKDSGEIR 2078
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Query: 76 IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNA 134
+ +G +T + I V D ND P Y V E G A+ V ATDAD+
Sbjct: 2890 VATDGLHVATTQLEITVLDSNDNPPICLKSKYTELVSESIAVGTAILTVEATDADDSSQL 2949
Query: 135 VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y S FV+DA++G + T++ LD E++ Y
Sbjct: 2950 HFYLSGQGAEDFVLDASSGVLHTSRPLDREQRPHY 2984
>gi|119514247|gb|ABL75910.1| protocadherin 2G35 [Takifugu rubripes]
Length = 960
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVP 141
S TA + ++V D+ND P F+ Y+ S+PE G +G V V ATD DEG N + YS+
Sbjct: 220 SGTAKITVKVLDVNDNVPVFEHSVYKISLPENGANGSFVITVKATDIDEGPNGEIEYSLG 279
Query: 142 EDIP------FVVDANTGDIRTNKALDYEKQQLY 169
P F +DA TGD+ K LDYE Q Y
Sbjct: 280 VHTPPSVLSIFHIDAVTGDVSLKKQLDYETQTSY 313
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 76/189 (40%), Gaps = 36/189 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS-----YFNLDPATEH- 72
Y ++ G L V A+D D G+ + Y +LD+ S Y N D + +
Sbjct: 457 YNVYLKENGVPGSILYSVSASDLDFGENAKISYSILDSKVQDVSVSSYVYINSDNGSIYS 516
Query: 73 ----------------QGPIQDEGGLSSTATVNIRVTDINDKNPE--------FQSLPYE 108
Q Q LSS T+++ + D ND P SL ++
Sbjct: 517 MHSFDYEKLKVFQIRVQAKDQGSPSLSSNTTIHVFILDQNDNAPAVIYPSSAALGSLSHQ 576
Query: 109 FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKAL---D 162
+ G + +V A DAD G NA + Y + E F V+ TG++RT +A+ D
Sbjct: 577 RMPRSAKAGHLLTKVTAVDADSGHNAWISYRLAEATDASLFTVNQYTGEVRTKRAVSEQD 636
Query: 163 YEKQQLYLE 171
Q+L +E
Sbjct: 637 DSSQRLLIE 645
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 17/138 (12%)
Query: 46 FGLVEYRLLDNNTDAASYFNLD-PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQS 104
+ LV +LD T S +N++ AT+ P LSS + + +TD+ND P F
Sbjct: 402 YALVTSGVLDRET--ISEYNIEITATDSGSP-----PLSSKKIIPVSITDVNDNPPVFTQ 454
Query: 105 LPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV----PEDIP----FVVDANTGDI 155
Y + E G G + V A+D D G+NA + YS+ +D+ ++++ G I
Sbjct: 455 PSYNVYLKENGVPGSILYSVSASDLDFGENAKISYSILDSKVQDVSVSSYVYINSDNGSI 514
Query: 156 RTNKALDYEKQQLYLERV 173
+ + DYEK +++ RV
Sbjct: 515 YSMHSFDYEKLKVFQIRV 532
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 67/159 (42%), Gaps = 24/159 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLDPAT-----------EHQG--- 74
G ++ VKATD D G G +EY L + S F++D T E Q
Sbjct: 255 GSFVITVKATDIDEGPNGEIEYSLGVHTPPSVLSIFHIDAVTGDVSLKKQLDYETQTSYR 314
Query: 75 ---PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDA 128
+D+G + +V + V DIND PE +VPE + G V + D
Sbjct: 315 IDVSAKDKGFPKMEGRCSVQVDVFDINDNAPEIVLTSKPTNVPEDSRSGTVVALLSVRDL 374
Query: 129 DEGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYE 164
D +N V +P+ PF + + G+ + T+ LD E
Sbjct: 375 DSSENGKVKLQLPKHSPFTLKPSFGNNYALVTSGVLDRE 413
>gi|119625021|gb|EAX04616.1| FAT tumor suppressor homolog 1 (Drosophila), isoform CRA_c [Homo
sapiens]
Length = 2228
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 17/132 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI-- 76
L +M+VK TD DSG +G V Y ++++ Y N LD T + I
Sbjct: 897 LHTLVMEVKTTDGDSGIYGHVTYHIVNDFAKDRFYINERGQIFTLEKLDRETPAEKVISV 956
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEG 131
+D GG + TVN+ +TD ND P+F++ YE ++ G +V +V A+DADEG
Sbjct: 957 RLMAKDAGGKVAFCTVNVILTDDNDNAPQFRATKYEVNIGSSAAKGTSVVKVLASDADEG 1016
Query: 132 QNAVVYYSVPED 143
NA + Y++ D
Sbjct: 1017 SNADITYAIEAD 1028
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 75/160 (46%), Gaps = 23/160 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ ATD D + Y LL + A F L+P T E Q
Sbjct: 1429 GKLIMQISATDADIRSNAEITYTLLGS---GAEKFKLNPDTGELKTSTPLDREEQAVYHL 1485
Query: 78 -----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D GG A++ + + D+ND PEF + PY +V E + G + RV ATDAD G
Sbjct: 1486 LVRATDGGGRFCQASIVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDADAG 1545
Query: 132 QNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
N + YS+ + D F ++ +G I+ K LD E Q +Y
Sbjct: 1546 LNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVY 1585
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKN 99
D+ SG+ L + LD+ T F++ QD+ + ++ V+I+V D ND +
Sbjct: 1144 DRQSGRLKL--EKSLDHETTKWYQFSILARC-----TQDDHEMVASVDVSIQVKDANDNS 1196
Query: 100 PEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI------PFVVDANT 152
P F+S PYE F V G V ++ A+DAD G N V YS+ + F ++ T
Sbjct: 1197 PVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMET 1256
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G I T K LD+EK+ Y +V
Sbjct: 1257 GWITTLKELDHEKRDNYQIKV 1277
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 25/169 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--------TDAASYF---NLD 67
YGA + +G ++QV A +D + Y ++ N + + F NLD
Sbjct: 1625 YGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLD 1684
Query: 68 PATEHQGPIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--- 118
+ H+ + E GG LS ATVN+ VTDIND P F Y + E D +
Sbjct: 1685 YESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISE--DAVLEQ 1742
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
+V V A DAD N+ ++YS+ + F +D G+++ K LD E
Sbjct: 1743 SVITVMADDADGPSNSHIHYSIIDGNQGSSFTIDPVRGEVKVTKLLDRE 1791
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 75/172 (43%), Gaps = 21/172 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + E G L +V+ATD D+G + Y L+D+ S L + + P+
Sbjct: 1520 YAITVFENTEPGTLLTRVQATDADAGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDR 1579
Query: 78 -------------DEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAV 120
D+G L++T TV + V DIND P F+ Y +V E G V
Sbjct: 1580 ELQAVYTLSLKAVDQGLPRRLTATGTVIVSVLDINDNPPVFEYREYGATVSEDILVGTEV 1639
Query: 121 GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V+A D NA + YS+ E F +D+ TG + + LDYE Y
Sbjct: 1640 LQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEY 1691
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 23/160 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + +G +++QV+ATD DS + Y++ N++ + +F++D +T
Sbjct: 678 YAVTLSEASVIGTSVVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRT 737
Query: 71 -------EHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
+H ++ +GG LSS V + VTD+ND P F+ YE + E G
Sbjct: 738 LDYEQSRQHTIFVRAVDGGMPTLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPHGH 797
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
V V A DAD + YS+ + FV+D+ TG I
Sbjct: 798 FVTCVKAYDADSSDIDKLQYSILSGNDHKHFVIDSATGII 837
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVY 137
+G SS A V ++V D ND +P + Y ++PE G + ++ ATDAD NA +
Sbjct: 1390 DGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPEDVLPGKLIMQISATDADIRSNAEIT 1449
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ F ++ +TG+++T+ LD E+Q +Y
Sbjct: 1450 YTLLGSGAEKFKLNPDTGELKTSTPLDREEQAVY 1483
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 75/173 (43%), Gaps = 36/173 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLD--------------------- 67
G ++Q++A+D DSG G V Y L + + F ++
Sbjct: 1215 GSRVIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQ 1274
Query: 68 ---PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRV 123
A++H IQ LSSTA V++ VTD+ND P F + Y+ +V E G + +
Sbjct: 1275 IKVVASDHGEKIQ----LSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSEDDPQGGVIAIL 1330
Query: 124 HATDAD-EGQNAVVYYSVPEDIP---FVVDA--NTGDIRTNKALDYEKQQLYL 170
TDAD E N V Y + P F V+ N + K LD EK+ YL
Sbjct: 1331 STTDADSEEINRQVTYFITGGDPLGQFAVETIQNEWKVYVKKPLDREKRDNYL 1383
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 11/101 (10%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR--------VHATDADEG 131
GLS+ TV + + D ND P F Y + E +V + A DAD+
Sbjct: 133 AGLSTNTTVLVHLQDENDNAPVFMQAEYTGLISESASINSVVLTDRNVPLVIRAADADKD 192
Query: 132 QNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
NA++ Y + E F +D++TG I T +LDYE+ ++
Sbjct: 193 SNALLVYHIVEPSVHTYFAIDSSTGAIHTVLSLDYEETSIF 233
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 34/178 (19%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
+L Y A+ + E+G + V A D+DSG+ G V Y L +++ +F + P E
Sbjct: 473 NLPYYAVVKVDTEVGHVIRYVTAVDRDSGRNGEVHYYLKEHH----EHFQIGPLGEISLK 528
Query: 76 IQ-----------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
Q D G + +A V + +T +N P F+ Y + E
Sbjct: 529 KQFELDTLNKEYLVTVVAKDGGNPAFSAEVIVPITVMNKAMPVFEKPFYSAEIAESI--- 585
Query: 119 AVGRVHA----TDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+VH+ A+ + V+YS+ + P F ++ NTG I LD+E Y
Sbjct: 586 ---QVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAPLDFEAHPAY 640
Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G + V+I V DIND P F Y ++ E G +V +V ATD+D N + Y
Sbjct: 652 GAHAEVFVDIIVDDINDNPPVFAQQSYAVTLSEASVIGTSVVQVRATDSDSEPNRGISYQ 711
Query: 140 V-----PEDIPFVVDANTGDIRTNKALDYEKQQ 167
+ F VD++TG I + LDYE+ +
Sbjct: 712 MFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSR 744
>gi|297674526|ref|XP_002815275.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23-like [Pongo abelii]
Length = 2916
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 31/184 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA-------- 69
F A ++ +G + + A D D G+ G V Y +L N + A F LD +
Sbjct: 1168 FPIAHVKEDVTVGSLVHHITAHDPDEGRNGKVTYSILSGNENMA--FMLDESSGLLTTTC 1225
Query: 70 -------TEHQGPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
T+H + D+G LSS+ T+ I V D+ND+ P F+ YE SV E Q G
Sbjct: 1226 PLDYEMKTQHILTVLALDDGTPALSSSQTLTITVLDVNDEAPVFKQHLYEASVKENQKPG 1285
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLE 171
V RV A D D G N+ + + + +P F ++++TG++ T LD E Q+++
Sbjct: 1286 EFVTRVEALDRDSGVNSKLQFEI---MPGASFESFEINSDTGEVVTTTILDREIQEVFTL 1342
Query: 172 RVFL 175
RV +
Sbjct: 1343 RVLV 1346
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 25/178 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------- 68
+L+Y + R+ E+G ++ + A DKD G G EY L D +A+ F +DP
Sbjct: 1480 TLYYQSSVREDAEVGTVVLVLSAVDKDEGLNGQTEYFLTD---EASGAFTIDPMSGTLKT 1536
Query: 69 --ATEHQGPIQD-----------EGGLSSTATVNIRVTDINDKNPEFQSLPYE-FSVPEG 114
A + + Q +G S+T + + VTD+ND +P + P++ F P+
Sbjct: 1537 SSALDREARSQHTFSAVARDCSIQGSRSTTVIIKVYVTDVNDNDPVLEQNPFDVFLSPQS 1596
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLE 171
+ V A D D G N V +S E F +D TG+I+ + E ++L+
Sbjct: 1597 RTNQTTVIVRADDLDLGPNGTVVFSFAETQSMFSIDKYTGEIQFQQNPSSEYFPIWLQ 1654
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 30/156 (19%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------------- 82
V A+D D+G VEY ++D NTD YF ++ E G + L
Sbjct: 1395 VLASDMDAGNNRAVEYHIIDGNTD--EYFAIN---EMSGELSTTRALDREQVSNFTLAVL 1449
Query: 83 ---------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQ 132
SS + +RV D ND +P F +L Y+ SV E + G V + A D DEG
Sbjct: 1450 CSDLGDPPRSSVIHLQVRVLDANDHSPSFPTLYYQSSVREDAEVGTVVLVLSAVDKDEGL 1509
Query: 133 NAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQ 166
N Y + ++ F +D +G ++T+ ALD E +
Sbjct: 1510 NGQTEYFLTDEASGAFTIDPMSGTLKTSSALDREAR 1545
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA-------------SYFN 65
Y A + ++QV ATD DSG GL+EY +L N + A + +
Sbjct: 1792 YQASVSEGQLYNAHVIQVFATDLDSGLNGLIEYSILSGNQEEAFQIDALSGVITTKAILD 1851
Query: 66 LDPATEHQGPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-AV 120
+ + + +Q D+G LS+T + ++VTDIND P F LP E +V +D L V
Sbjct: 1852 YELTSSYSLIVQATDKGMPRLSNTTIIKVQVTDINDNAPAF--LPSE-AVEITEDSLPGV 1908
Query: 121 GRVHATDADEGQNAVVYYSVPED----IPFVVDANTGDIRTNKALDYEKQQLY 169
H + D N+ +S +D F +D NTG + K LD+E+ Y
Sbjct: 1909 IVTHVSVHDVDLNSAFIFSFAKDSNPGTKFAIDQNTGVVVLVKTLDFEEMSEY 1961
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 83 SSTATVNIRVTDINDKNPEF-QSLP---YEFSVPEGQD-GLAVGRVHATDADEGQNAVVY 137
++T V + VTDIND P F Q +P V EGQ + V V A D DEG NA V
Sbjct: 820 NATMAVYVSVTDINDNRPFFPQCVPGKELHLKVLEGQPVNMLVTTVFAKDPDEGNNAEVI 879
Query: 138 YSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
YSV + F +DAN+G+IRT L Y+ + Y
Sbjct: 880 YSVSSEDSSDHFKIDANSGEIRTTTILSYDYKPSY 914
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 20/168 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
Y A ++ + G + +V+A D+DSG +++ ++ + + N D I
Sbjct: 1273 LYEASVKENQKPGEFVTRVEALDRDSGVNSKLQFEIMPGASFESFEINSDTGEVVTTTIL 1332
Query: 78 D--------------EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
D +GG LSST T+ V D ND PEF Y+ V E Q+ V
Sbjct: 1333 DREIQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEFIVSSYDIEVLENQEPEVV 1392
Query: 121 GRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEK 165
V A+D D G N V Y + + D F ++ +G++ T +ALD E+
Sbjct: 1393 YTVLASDMDAGNNRAVEYHIIDGNTDEYFAINEMSGELSTTRALDREQ 1440
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 76/175 (43%), Gaps = 39/175 (22%)
Query: 18 FYGAM---ARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN--NTDAASYFNLDPATEH 72
+GA+ +++++ V +V A+D DSG +G +EY L D + +A F +DP
Sbjct: 58 LWGAIVFRSQEENTKPVKETEVTASDADSGLYGFIEYSLYDGFLSYEAPQAFRIDPHDAQ 117
Query: 73 QGPIQD------------------------------EGGLSSTATVNIRVTDINDKNPEF 102
QD +GGLS+ A V + + D+ND +P F
Sbjct: 118 ICVSQDIDRERDPATYDLLVKAKDGDEQRMTHLALVKGGLSAQAFVRVDLEDVNDNHPVF 177
Query: 103 QSLPYEFSVP-EGQDGLAVGRVHATDADEG-QNAVVYYSVPEDIP--FVVDANTG 153
Y S+ E Q G + V ATD D G V Y +P D+ F VD+ TG
Sbjct: 178 NPSTYVTSISDETQPGTEIINVLATDQDSGIYGTVAYELIPGDVSSLFTVDSTTG 232
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 25/168 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNN--TDAASY----FNLDPATE--HQGPI---- 76
+ T+ + A D D+G +G + Y ++ T SY F +DP T H I
Sbjct: 2329 ISSTICSINALDFDAGPYGELTYSIVSPCFLTHGMSYDHDLFLIDPLTGDIHAKQILDYE 2388
Query: 77 -----------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
+D+G +++ V + + I++ P F Y F++PE +D +GRV
Sbjct: 2389 NGNKYCLTVQAKDKGDATASLVVWVDIEGIDEFEPIFTQDQYFFTLPEKNKDRQLIGRVE 2448
Query: 125 ATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEKQQLYLE 171
A+DAD G + V+ YS+ PF V+ G+I +AL K QL E
Sbjct: 2449 ASDADAGIDGVILYSLGTSSPFFSVNKTNGNIYLIRALPLIKSQLNKE 2496
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
LSSTA ++I+V D+ND P F SL Y V E G + V A D D G +A + Y++
Sbjct: 2190 LSSTAVISIQVVDVNDNPPNFSSLSYHTHVKESTPLGSHITVVSANDRDTGSHAEIIYNI 2249
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEK 165
E F ++ NTG + K LDYE+
Sbjct: 2250 ISGNEKGHFYLEENTGVLYLIKPLDYEE 2277
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---PED 143
T I + D+ND NP F S P + G V + A D DEG+N V YS+ E+
Sbjct: 1150 TAQIVILDVNDHNPTFMSFPIAHVKEDVTVGSLVHHITAHDPDEGRNGKVTYSILSGNEN 1209
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
+ F++D ++G + T LDYE + ++ V +
Sbjct: 1210 MAFMLDESSGLLTTTCPLDYEMKTQHILTVLAL 1242
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 21/172 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA---------------S 62
Y + + E G +++ VKA DS + + +Y + N D
Sbjct: 1688 LYKGLVTENCEAGTSIVTVKAFAPDSIQDSM-KYSIFSGNEDGVLSLCSKSGQLTVKEPK 1746
Query: 63 YFNLDPATEHQGPIQDEG-GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-V 120
+ + + E Q + E G + V + + D ND +P F+ Y+ SV EGQ A V
Sbjct: 1747 FLDFEVRNEVQLIVLAESSGHRAYCKVAVLIQDENDNSPCFEQSVYQASVSEGQLYNAHV 1806
Query: 121 GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ATD D G N ++ YS+ ++ F +DA +G I T LDYE Y
Sbjct: 1807 IQVFATDLDSGLNGLIEYSILSGNQEEAFQIDALSGVITTKAILDYELTSSY 1858
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPE 142
S+ VNI V D+ND +P F E + + G A+ A D D G+N ++ YS+
Sbjct: 462 SSTEVNITVVDVNDNHPAFLRTSDEIRISQTTAPGTALYLARAEDRDSGRNGLIRYSIAS 521
Query: 143 DIP--FVVDANTGDIRTNKALDYEKQQ 167
P F +D G + N +L K +
Sbjct: 522 PQPGVFAIDRALGVLFLNGSLGVSKHR 548
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 69/183 (37%), Gaps = 30/183 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF----------- 64
SL Y ++ LG + V A D+D+G + Y ++ N Y
Sbjct: 2212 SLSYHTHVKESTPLGSHITVVSANDRDTGSHAEIIYNIISGNEKGHFYLEENTGVLYLIK 2271
Query: 65 --NLDPATEHQGPIQD---EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
+ + T+ +Q E S A V + V D ND P+F + VP
Sbjct: 2272 PLDYEEMTKFTLTVQASDAEKKHFSFAVVFVSVLDDNDHAPQFMFSSFSCIVPXNLPISS 2331
Query: 119 AVGRVHATDADEGQNAVVYYSV------------PEDIPFVVDANTGDIRTNKALDYEKQ 166
+ ++A D D G + YS+ D+ F++D TGDI + LDYE
Sbjct: 2332 TICSINALDFDAGPYGELTYSIVSPCFLTHGMSYDHDL-FLIDPLTGDIHAKQILDYENG 2390
Query: 167 QLY 169
Y
Sbjct: 2391 NKY 2393
>gi|351710657|gb|EHB13576.1| Protocadherin-11 X-linked [Heterocephalus glaber]
Length = 985
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 76/163 (46%), Gaps = 28/163 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G L ++ ATD DSG + Y L DA S FNLD T E Q
Sbjct: 449 GTQLTKISATDTDSGHNAEISYLL---GMDAPSEFNLDRRTGILTVVKKLDREKQEKYYF 505
Query: 76 ---IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--QDGLAVGRVHATDA 128
+D G L + ATV + V D ND +P F Y F VPE + G VG + TD
Sbjct: 506 TVLAKDNGMPPLMTNATVFVTVLDQNDNSPIFTHNEYNFYVPENLPRHG-TVGLITVTDP 564
Query: 129 DEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
D G+N+ V S+ D+ F +D TG IR N + D EKQ+ Y
Sbjct: 565 DYGENSAVTLSI-SDVSDEFTIDPQTGVIRPNISFDREKQESY 606
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 78 DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
++GG SSTA + + V+D ND +P F+ E S+PE G +V ++HATDAD G+N
Sbjct: 189 EDGGFPQRSSTAILQVSVSDTNDNHPVFKEQEIEVSIPENAPVGTSVTQLHATDADIGEN 248
Query: 134 AVVYYSVPEDIP------FVVDANTGDIRTNKALDYEK 165
A +++ I F ++ TG I + LD E+
Sbjct: 249 AKIHFYFSNLISNMAKRLFHLNTTTGLITIKEPLDREE 286
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+ ++ + I+V D ND P F SVPE G + ++ ATD D G NA + Y +
Sbjct: 413 LNQSSMLLIKVKDENDNAPIFTQPFISLSVPENNSPGTQLTKISATDTDSGHNAEISYLL 472
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
D P F +D TG + K LD EKQ+ Y
Sbjct: 473 GMDAPSEFNLDRRTGILTVVKKLDREKQEKY 503
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 63/150 (42%), Gaps = 30/150 (20%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP---------------I 76
T+ + TD D G+ V + +D + F +DP T P +
Sbjct: 555 TVGLITVTDPDYGENSAVTLSI----SDVSDEFTIDPQTGVIRPNISFDREKQESYTFYV 610
Query: 77 QDEGG----LSSTATVNIRVTDINDKNPEFQSLP----YEFSVPEGQDGLAVGRVHATDA 128
+ E G SSTA V I V D+ND P F P YE +P G V +V A D
Sbjct: 611 KAEDGGRVSHSSTAKVTINVVDVNDNKPGFVVPPSNHSYELVLPSTNPGTVVFKVVAIDN 670
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDI 155
D G N+ + YS+ FV+D TG+I
Sbjct: 671 DTGMNSELRYSIVGGNTKGLFVIDQTTGNI 700
Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 65/170 (38%), Gaps = 30/170 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEY-----------RLLDNNTDAASYFNLDPATEHQGP-- 75
+G ++ Q+ ATD D G+ + + RL NT +P + P
Sbjct: 231 VGTSVTQLHATDADIGENAKIHFYFSNLISNMAKRLFHLNTTTGLITIKEPLDREEAPSH 290
Query: 76 -----IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA--------VGR 122
D G + + ATV + +TD+ND P + Y + G L+ +
Sbjct: 291 KLLVLASDGGSMPAKATVLVNITDVNDNVPSID-IRYIINPTNGTVVLSENAPLNTKIAL 349
Query: 123 VHATDADEGQNAVVYYSVPEDIPFV---VDANTGDIRTNKALDYEKQQLY 169
+ TD D N V ++PF V +N + T LDYE + Y
Sbjct: 350 ITVTDKDAEHNGRVTCFTDHEVPFRLRPVFSNQFLLETAAYLDYESTREY 399
>gi|380796719|gb|AFE70235.1| protocadherin-16 precursor, partial [Macaca mulatta]
Length = 1815
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 80/177 (45%), Gaps = 27/177 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + R+ G +L+ ++ATD D G G V Y + + + F+LDP T
Sbjct: 171 YSVLLRENSAPGTSLLTLRATDPDLGANGQVTYGGVSSGS-----FSLDPDTGVLTTLRA 225
Query: 71 ---EHQGPI------QDEGGLS--STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
E Q I QD G + AT+ + V D ND P F S VPEGQD
Sbjct: 226 LDREEQEEINLTVYAQDRGSPPQLTHATIRVAVEDENDHAPTFGSTHLSLEVPEGQDPQT 285
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ + A+D D G N + Y + + P FV+D +G+ T + LD E + + R+
Sbjct: 286 LTMLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQLRI 342
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 28/167 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQ 73
+G L+ V+A+D D G GLV + + ++ D + F LD ++ HQ
Sbjct: 1134 VGAELLHVEASDADPGPHGLVRFTV--SSGDPSGLFELDESSGTLRLAHALDCETQARHQ 1191
Query: 74 GPIQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
+Q G + A V I V D+ND P F S+ E Q G V +HA D D
Sbjct: 1192 LVVQAADPAGAHFALAPVTIEVQDVNDHGPAFPLNLLSTSLAENQPPGTLVTTLHAIDGD 1251
Query: 130 EGQNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYEKQQLY 169
G + YS+ E P F ++++TG++R A DYE + +
Sbjct: 1252 AGAFGKLRYSLLEAGPGPEGREAFALNSSTGELRARVAFDYEHTESF 1298
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 20/158 (12%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL---------------DPATEHQGPI 76
TL ++A+D D G G ++YR+LD + A +L +PA + +
Sbjct: 285 TLTMLRASDPDVGANGQLQYRILDGDPSGAFVLDLASGEFGTMRPLDREVEPAFQLRIEA 344
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQN 133
+D G LS+T + + V D ND P F Y VPE G + ++ A D D G N
Sbjct: 345 RDGGQPALSATLLLTVTVLDANDHAPAFPVPAYSVEVPEDVPAGTLLLQLQAHDPDAGAN 404
Query: 134 AVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
V Y + F+++ ++G++RT ALD E+ Y
Sbjct: 405 GRVTYYLGAGTAGAFLLEPSSGELRTAAALDREQCPSY 442
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 21/147 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNT--DAASYFNLDPAT-----------EHQGPI 76
G + + A D D+G FG + Y LL+ + F L+ +T EH
Sbjct: 1239 GTLVTTLHAIDGDAGAFGKLRYSLLEAGPGPEGREAFALNSSTGELRARVAFDYEHTESF 1298
Query: 77 Q------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ D G LS++ TV++ VT ++ +P F + + F VPEG + G ++G V ATD D
Sbjct: 1299 RLLVGAADAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQVPEGARRGHSLGHVQATDED 1358
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDI 155
G + +V YS+ P F ++ TG +
Sbjct: 1359 GGADGLVLYSLATSSPYFGINQTTGAL 1385
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 67/158 (42%), Gaps = 30/158 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPI--- 76
G L+Q++A D D+G G V Y L A F L+P++ Q P
Sbjct: 388 GTLLLQLQAHDPDAGANGRVTYYL---GAGTAGAFLLEPSSGELRTAAALDREQCPSYTF 444
Query: 77 -------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-----GQDGLAVGRVH 124
G LS+T +V I V D+ND P F + P +P LA+ +
Sbjct: 445 AVSAVDGAAAGPLSTTVSVTITVRDVNDHAPTFPTSPLRLRLPRPGPSFSTPTLALATLR 504
Query: 125 ATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKA 160
A D D G NA + Y + P VD+ TG+IR ++
Sbjct: 505 AEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARS 542
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 71/160 (44%), Gaps = 27/160 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYFN-LDP----------- 68
G + V A D D G+ V YRL L ++T A S LD
Sbjct: 78 GPAALHVVARDPDLGEAARVSYRLASGGDGHFRLHSSTGALSVVQPLDREQRAEHVLTVV 137
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
A++H P + S+T + + V D+ND+ P FQ Y + E G ++ + ATD
Sbjct: 138 ASDHGSPPR-----SATQVLTVSVADVNDEAPTFQQQEYSVLLRENSAPGTSLLTLRATD 192
Query: 128 ADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQ 167
D G N V Y F +D +TG + T +ALD E+Q+
Sbjct: 193 PDLGANGQVTYGGVSSGSFSLDPDTGVLTTLRALDREEQE 232
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 74/178 (41%), Gaps = 40/178 (22%)
Query: 30 GVTLMQVKATDKDSGK-FGLVEYRLLDNNTDAASYFNLDP----ATEHQGP-IQDEGGL- 82
G TL+ ++ATD D + VEY ++ N F L+P A E GP Q G L
Sbjct: 1015 GSTLLTLEATDADGSRTHAAVEYSIISGNW--GRVFQLEPRLAEAGESAGPGPQALGCLV 1072
Query: 83 ---------------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
SS V + V D+ND P F Y +VPE
Sbjct: 1073 LLEPLDFESLTQYNLTVAAADRGQPPQSSVVPVTVTVLDVNDNPPVFTRASYRVAVPEDT 1132
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
G + V A+DAD G + +V ++V P F +D ++G +R ALD E Q +
Sbjct: 1133 PVGAELLHVEASDADPGPHGLVRFTVSSGDPSGLFELDESSGTLRLAHALDCETQARH 1190
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 70/180 (38%), Gaps = 39/180 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + L L+QV+A D D G G + Y L + A F++DP
Sbjct: 693 YVAFLPESRPLEGPLLQVEADDLDQGSGGQISYSLAASQP-ARGLFHVDPATGTITTTAI 751
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
AT+ P L +AT+ + V D ND P P+E V E
Sbjct: 752 LDREIWAETRLVLMATDRGSP-----ALVGSATLTVMVIDTNDNRPTIPQ-PWELRVSED 805
Query: 114 GQDGLAVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + +V D D G V++Y S P+D PF V G + LD+E+ Y
Sbjct: 806 ALLGSEIAQVTGNDVDSGP--VLWYVLSPSGPQD-PFSVGRYGGRVSLTGPLDFEQCDRY 862
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------- 68
Y M + G ++ V ATD+DSG G + Y L A F++DP
Sbjct: 897 LYQVMLLEHTPPGSAILSVSATDRDSGANGHISYHL----ASPADGFSVDPNNGTLFTIV 952
Query: 69 ---ATEHQGP--------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG- 114
A H G +D G G ++ ATV++++ D ND P F Y +V E
Sbjct: 953 GTVALGHDGSGAVDVVLEARDHGTPGRAARATVHVQLQDQNDHAPSFTLPHYRVAVTEDL 1012
Query: 115 QDGLAVGRVHATDADEGQ-NAVVYYSV 140
G + + ATDAD + +A V YS+
Sbjct: 1013 PPGSTLLTLEATDADGSRTHAAVEYSI 1039
>gi|363738904|ref|XP_003642092.1| PREDICTED: uncharacterized protein LOC100858872 [Gallus gallus]
Length = 1229
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 74/163 (45%), Gaps = 23/163 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------E 71
+G TL++V ATD D G G V+Y L A+ F+L+ T E
Sbjct: 255 VGSTLLRVTATDPDDGTNGDVKYSLNKITQKASKIFHLESKTGAIRLVRNLDYEEGESYE 314
Query: 72 HQGPIQDEGGLSSTATVNIRVTDINDKNPEF--QSLPYEFSVPEGQDGLAVGRVHATDAD 129
QD GGLS A V+I VTD+ND PE +S E S + G V +H D D
Sbjct: 315 LLVQAQDGGGLSDKAKVSISVTDVNDNAPEISVRSALSEIS-EDAAPGTVVALLHVQDRD 373
Query: 130 EGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
G N V S+ E +PF ++ D + T + LD E+ Y
Sbjct: 374 SGANGEVRCSLGEGVPFRLERALDDYYSVVTARELDRERASEY 416
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 70/161 (43%), Gaps = 21/161 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI---------- 76
G QVKATD D G + Y D + A F+LDP T + GP+
Sbjct: 832 GSLAFQVKATDGDEGTNAEITYSFSDIASSARQLFSLDPKTGDVKITGPLDYEDVKYYEV 891
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEG 131
+D GGLS+ V+I V D+ND P LP VPE V ++ D D G
Sbjct: 892 TVEGKDGGGLSAHTKVHIGVIDVNDNAPSLTLLPIVNPVPEDSVPSTVVAVINVRDRDSG 951
Query: 132 QNAVVYYSVPEDIPFVVDA---NTGDIRTNKALDYEKQQLY 169
N V + D+PF ++A +T + +LD E+ Y
Sbjct: 952 VNGEVTCKLNGDLPFKLEASSESTYKLVIENSLDREEVSAY 992
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVP 141
S TA + I VTD ND P F Y VPE +G +V ATD DEG NA + YS
Sbjct: 797 SGTAQIKIDVTDANDNAPVFAKEIYMVRVPENLPEGSLAFQVKATDGDEGTNAEITYSF- 855
Query: 142 EDIP------FVVDANTGDIRTNKALDYEKQQLY 169
DI F +D TGD++ LDYE + Y
Sbjct: 856 SDIASSARQLFSLDPKTGDVKITGPLDYEDVKYY 889
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 63/143 (44%), Gaps = 27/143 (18%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRV 92
L+ KA D++ F + LL +D DPA + TA + + V
Sbjct: 192 LVLAKALDREEAAF----HELLLRASDGG-----DPAR------------TGTARIRVAV 230
Query: 93 TDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP-----F 146
D ND P F Y VPE G + RV ATD D+G N V YS+ + F
Sbjct: 231 LDANDNAPAFSQAVYTVRVPEDVPVGSTLLRVTATDPDDGTNGDVKYSLNKITQKASKIF 290
Query: 147 VVDANTGDIRTNKALDYEKQQLY 169
+++ TG IR + LDYE+ + Y
Sbjct: 291 HLESKTGAIRLVRNLDYEEGESY 313
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 59/122 (48%), Gaps = 14/122 (11%)
Query: 51 YRLLDNNT---DAASYFNLD-PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLP 106
Y+L+ N+ + S +N+ AT+ P LSS A + + V+D+ND P F+
Sbjct: 976 YKLVIENSLDREEVSAYNITITATDRGSP-----ALSSRADLVLEVSDVNDNAPVFEEAA 1030
Query: 107 YEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYY---SVPEDIPFV-VDANTGDIRTNKAL 161
Y VPE G V RV A DAD G N V Y D FV V A TG++ ++
Sbjct: 1031 YSAYVPENNAAGELVLRVSARDADAGANGRVSYALAGGGADAAFVSVRAETGELYAQRSF 1090
Query: 162 DY 163
DY
Sbjct: 1091 DY 1092
>gi|190336593|gb|AAI62450.1| Protocadherin 1 gamma 3 [Danio rerio]
Length = 939
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGPI 76
G +++V ATD D G G V Y + A+ F++D T E I
Sbjct: 257 GTEIIRVSATDADEGPNGEVTYEFSRISDKASKLFSIDKKTGQILVTEEIDYESEKNYEI 316
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
QD GL+STATV I +TD+ND P +PE + G VG ++ D D G
Sbjct: 317 GIHAQDGSGLASTATVIIDITDVNDNPPRIILKSLNNPIPENSEPGAEVGIINVQDQDSG 376
Query: 132 QNAVVYYSVPEDIPFVVD---ANTGDIRTNKALDYEKQQLY 169
+N + SV +++PF ++ N + KALD EK+ Y
Sbjct: 377 ENRQIRCSVQQNVPFKLNPSVKNYFSLVMTKALDREKESDY 417
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYY--- 138
S TA ++I V D ND P F Y+ ++ E G + RV ATDADEG N V Y
Sbjct: 222 SGTAVIHITVLDANDNVPVFDQPVYKVTLAENTPSGTEIIRVSATDADEGPNGEVTYEFS 281
Query: 139 --SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
S F +D TG I + +DYE ++ Y
Sbjct: 282 RISDKASKLFSIDKKTGQILVTEEIDYESEKNY 314
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 26/167 (15%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-----NTDAASYFNL------DPATEHQ 73
+ E G + + D+DSG+ + + N N +YF+L D E
Sbjct: 357 ENSEPGAEVGIINVQDQDSGENRQIRCSVQQNVPFKLNPSVKNYFSLVMTKALDREKESD 416
Query: 74 GPIQ---DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
I +GG LS++ T+++ V+D+ND P F+ Y + E G +V V A
Sbjct: 417 YNITITATDGGSPPLSTSMTIHLFVSDVNDNPPVFEQQVYSAYINENNKVGTSVCSVSAN 476
Query: 127 DADEGQNAVVYYS-VPEDIPFV-------VDANTGDIRTNKALDYEK 165
D D QN V YS VP ++ V ++ +TG I T ++ DYE+
Sbjct: 477 DPDWRQNGTVLYSLVPSEVSGVPVSSFLSINGDTGVIHTVRSFDYEQ 523
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 45/192 (23%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA---ASYFNL--DPATEH- 72
Y A + +++G ++ V A D D + G V Y L+ + +S+ ++ D H
Sbjct: 456 YSAYINENNKVGTSVCSVSANDPDWRQNGTVLYSLVPSEVSGVPVSSFLSINGDTGVIHT 515
Query: 73 --------------QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ- 115
+ +D G LSS TV + +TD ND +P+ + VP+G+
Sbjct: 516 VRSFDYEQFRNFSVKVVARDNGSPPLSSNVTVKVFITDENDNSPQIL-----YPVPDGKT 570
Query: 116 -----------DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKAL 161
G V +V A DAD GQNA + Y + + F + ++G+I+T + +
Sbjct: 571 LMTEMVPKATLSGSLVSKVIAVDADSGQNAWLSYQILKSTDPGLFTIGLHSGEIKTQRDI 630
Query: 162 ---DYEKQQLYL 170
D KQ L +
Sbjct: 631 SESDNMKQNLVI 642
>gi|449276280|gb|EMC84894.1| Protocadherin-11 X-linked, partial [Columba livia]
Length = 1012
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 74/165 (44%), Gaps = 24/165 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G L ++ ATD DSG+ + Y L +DA FNLD T E Q
Sbjct: 482 GTQLTKISATDADSGRNAEISYIL---GSDAPPIFNLDRRTGILTAVRKLDREKQDRYSF 538
Query: 76 ---IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
+D G L + ATV + V D ND +P F Y F VPE VG + TDAD
Sbjct: 539 TVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLPMYGTVGLITVTDAD 598
Query: 130 EGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYLERV 173
G+NA V S+ F++D TG IR N D E Q Y +V
Sbjct: 599 SGENAAVTLSILNGRDNFIIDPLTGVIRPNITFDREHQGSYTFQV 643
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
SSTA + + VTD+ND P F+ E SVPE G +V ++HATDAD G NA +++
Sbjct: 230 SSTAILQVTVTDVNDNRPVFKENDIEVSVPENAPVGTSVSQLHATDADLGSNAQIHFYFS 289
Query: 142 EDIP------FVVDANTGDIRTNKALDYEKQQLY 169
I F +D TG I + LD E+ ++
Sbjct: 290 NQISSLAKRLFAIDNTTGLITIREPLDREESPVH 323
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 20/169 (11%)
Query: 21 AMARDKHELGVTLMQVKATDKDS---GKFGL-----VEYRL---LDNN--TDAASYFNLD 67
+ +K L + + DKD+ GK V +RL DN + A++ + +
Sbjct: 368 VLLSEKAPLNTKIALITVMDKDADLNGKVTCFTDHDVPFRLKPVFDNQFLLETATFLDYE 427
Query: 68 PATEHQGPI--QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
E+ I D G L+ +A + I++ D ND P F S+PE G + +
Sbjct: 428 ATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPENNAPGTQLTK 487
Query: 123 VHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+ ATDAD G+NA + Y + D P F +D TG + + LD EKQ Y
Sbjct: 488 ISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTAVRKLDREKQDRY 536
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 56/132 (42%), Gaps = 27/132 (20%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ--- 77
T+ + TD DSG+ V +L+ + F +DP T EHQG
Sbjct: 588 TVGLITVTDADSGENAAVTLSILNGRDN----FIIDPLTGVIRPNITFDREHQGSYTFQV 643
Query: 78 ---DEGGL--SSTATVNIRVTDINDKNPEF----QSLPYEFSVPEGQDGLAVGRVHATDA 128
D G L SSTA V I V D+ND P F + YE G V +V A D
Sbjct: 644 KAVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSASPGSVVTKVFAVDN 703
Query: 129 DEGQNAVVYYSV 140
D G NA + YS+
Sbjct: 704 DTGMNAELRYSI 715
>gi|449267132|gb|EMC78098.1| Protocadherin Fat 2 [Columba livia]
Length = 4375
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 81/180 (45%), Gaps = 23/180 (12%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI 76
+ Y A + ++Q+ A+DKDSG+ V Y++LD+ +DA +FN+D +T
Sbjct: 2276 MIYTASVSESLPAQTPVVQLFASDKDSGRNKAVSYQILDDGSDATKFFNIDGSTGQITTA 2335
Query: 77 Q-----------------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQD 116
Q D G LSS A V + VTDIND PEF L YE V E
Sbjct: 2336 QALDYERNQQFRMKVRATDHGMPPLSSDALVIVDVTDINDNPPEFSQLQYEAKVSEMATC 2395
Query: 117 GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
G V +V A D D G + Y + ++ F +++ +G I + + Y RV
Sbjct: 2396 GHIVIKVQALDPDSGDTTRLEYVILSGNDNRHFTINSTSGIISMFNRCKKDLESFYNLRV 2455
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE 142
S ATV + V D+ND P+F+++PY SV +G + G + +V ATD D G N + YS E
Sbjct: 2053 SQATVKVYVEDVNDNPPQFENVPYYTSVQDGTEPGDVLFQVSATDKDIGDNGAITYSFAE 2112
Query: 143 DIP-FVVDANTGDIRTNKALDYEKQQLYLERVF 174
D F +D GDI K LDY+ Y RV
Sbjct: 2113 DYKYFWIDPYLGDISLKKPLDYQALNKYNLRVI 2145
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVP--EDI 144
V+I +TD N+ P F Y + E G +V V ATD DEG N V Y++ + +
Sbjct: 447 VHIDITDCNNHAPSFSQSSYRGAFDENVPPGTSVLTVQATDEDEGNNGFVTYTIANQKSV 506
Query: 145 PFVVDANTGDIRTNKALDYE-KQQLYLERVF 174
PFV+D +G I T+K++DYE Q+ Y RV+
Sbjct: 507 PFVIDPYSGIISTSKSMDYELMQRWYHLRVW 537
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 26/167 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + E+G ++++ A D D G +G ++Y ++ N A F++D
Sbjct: 2487 YEAELAENAEIGTKVIELLAIDPDGGPYGTIDYTII--NKLAHEKFSIDDKGHITTLQKL 2544
Query: 69 ----ATEHQGPIQ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
+TE I+ D GG + TV I +TD ND P+F++ Y S+ G
Sbjct: 2545 DRENSTERVIAIKVMAKDGGGKVAFCTVKIILTDENDNPPQFKASEYTLSIQSNVSKGSP 2604
Query: 120 VGRVHATDADEGQNAVVYYSVP--EDIP---FVVDANTGDIRTNKAL 161
V +V A DADEG NA V YSV ED+ ++A TG ++ ++L
Sbjct: 2605 VIQVLAYDADEGANADVIYSVDSVEDVAEDLVEINAATGVVKVKESL 2651
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 35 QVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTD 94
+V DK +G + + +D+ T ++ HQ E L S +VNI V D
Sbjct: 2739 EVFTLDKQTGALKI--KKAMDHETTKWYQIDVMAHCSHQ-----ETELVSLVSVNIHVQD 2791
Query: 95 INDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDIP-----FVV 148
+ND P F++ PY+ V E G V +V A D D G + V YS+ + F +
Sbjct: 2792 VNDNRPVFEADPYKAFVMENMPSGTTVIQVTANDQDTGNDGQVTYSLEAESGNLRGLFTI 2851
Query: 149 DANTGDIRTNKALDYEKQQLYLERVFLIS 177
D +G I T K LD E Q++Y R ++++
Sbjct: 2852 DGESGWITTLKELDCEAQEIY--RFYVVA 2878
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG-LAVGRVHATDADEGQNAVVYYS 139
G S A V + V D+ND P F + Y SV E V ++ A+D D G+N V Y
Sbjct: 2252 GSFSEARVEVEVEDVNDNPPVFSQMIYTASVSESLPAQTPVVQLFASDKDSGRNKAVSYQ 2311
Query: 140 VPEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERV 173
+ +D F +D +TG I T +ALDYE+ Q + +V
Sbjct: 2312 ILDDGSDATKFFNIDGSTGQITTAQALDYERNQQFRMKV 2350
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 73/168 (43%), Gaps = 21/168 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---------NNTDAASYFN--LD 67
Y AM ++ +G ++ + A +D+ + ++Y +++ N+ A Y N LD
Sbjct: 3224 YMAMVKEDVAVGTEVLNLSALTRDNAENTEIKYEIVNGNDHGKFQLNSNTGALYINGSLD 3283
Query: 68 PATEHQGPIQDEG------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAV 120
H+ + EG LS V I +TDIND PEF PY + E G +
Sbjct: 3284 FEASHEYYLSIEGTRKGSASLSDVTMVVINITDINDHAPEFIQDPYFADIREDAAVGEII 3343
Query: 121 GRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEK 165
V A D D N + YS+ E P F + +G I K LD E+
Sbjct: 3344 LTVSADDLDGAMNNQITYSIVEGNPLGHFAIQPKSGQISIAKHLDREE 3391
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVY 137
+G + V I V DIND +PE + Y V EG GL + ++ ATD D G NA +
Sbjct: 2989 DGKFQAITEVEIFVLDINDNSPECGQIFYTGRVSEGALPGLFILKISATDPDVGSNAQIT 3048
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
YS+ P F + +TG++ T+ LD E++ +Y
Sbjct: 3049 YSLHGPGAEEFRLGPHTGELTTSAPLDREQKPMY 3082
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 23/153 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL--------------DPATEH--QGP 75
+++Q+ A D DS G + + +L N NL + EH +
Sbjct: 1157 SVLQLDALDPDSSSEGKLTFHILTGNPQGLFTINLITGLISTTSRQLDREYKAEHILEVA 1216
Query: 76 IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE---GQDGLAVGRVHATDADE 130
+ D G L ST+ V I+V D ND P F + +PE + L V R+ A+D D+
Sbjct: 1217 VSDNGEPALKSTSRVVIQVLDANDSPPTFPHKLFMVQLPERDASETPLPVYRLIASDRDQ 1276
Query: 131 GQNAVVYYSVPEDIP--FVVDANTGDIRTNKAL 161
GQN+ + Y++ E+ F ++ TG + + KA
Sbjct: 1277 GQNSHITYTIEEEDEGIFTINPTTGMVFSRKAF 1309
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 76/187 (40%), Gaps = 35/187 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + G T++QV A D+D+G G V Y L + + F +D
Sbjct: 2804 YKAFVMENMPSGTTVIQVTANDQDTGNDGQVTYSLEAESGNLRGLFTIDGESGWITTLKE 2863
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
AT+H +Q LSS V + V+D ND P+F S Y+ SV E
Sbjct: 2864 LDCEAQEIYRFYVVATDHGRKVQ----LSSQTLVEVTVSDENDNAPQFTSDFYKGSVIEN 2919
Query: 114 GQDGLAVGRVHATDAD--EGQNAVVYYSVPEDI--PFVVDANTGD--IRTNKALDYEKQQ 167
+ G V + DAD E V Y D F V+ G+ I + K LD E +
Sbjct: 2920 AEPGQVVVTLSTIDADISEQNRRVTCYITEGDALGQFTVNQIEGEWTISSKKPLDREDTE 2979
Query: 168 LYLERVF 174
YL +V
Sbjct: 2980 KYLLKVM 2986
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 78/175 (44%), Gaps = 34/175 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSS----- 84
G +++V ATDKD GK GL+ + + F LDP++ G + G SS
Sbjct: 1466 GREILRVSATDKDKGK-GLIYTIHGSVDPKSTRLFQLDPSS---GVLTTAEGFSSQPMPQ 1521
Query: 85 -TATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
T TV +R V + N P+F S+ YE V + G + +V A
Sbjct: 1522 HTLTVMVRDQEVPIKRNFVRVIIHVDNCNLHPPQFSSIHYEAEVLDSAVVGTEIMQVRAL 1581
Query: 127 DADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
D D+G NA ++YS+ + F +D +G I + LD +Q ER LI K
Sbjct: 1582 DQDQGANAEIHYSLQAGNGEGFFSIDLYSGIITVAQKLDPSRQ----ERFTLIVK 1632
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 66/167 (39%), Gaps = 27/167 (16%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------ 70
+FY + G+ ++++ ATD D G + Y L + A F L P T
Sbjct: 3015 IFYTGRVSEGALPGLFILKISATDPDVGSNAQITYSL---HGPGAEEFRLGPHTGELTTS 3071
Query: 71 ----EHQGPI-------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP---EGQD 116
Q P+ D GG S A + + V D ND P F P +V
Sbjct: 3072 APLDREQKPMYHLVAKATDGGGRSCQADITLIVEDTNDNAPRF--FPSHCAVAVFDNTTT 3129
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKAL 161
+ V A D DEG NA V YS+ + F ++ TG IR K L
Sbjct: 3130 KTPIAVVAARDLDEGPNAEVVYSLSDSANGHFSIEETTGVIRLEKPL 3176
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 29/166 (17%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAA---------------------SYFNLDPAT 70
T+ + A D D+G G + Y + D N D+ S++ L+
Sbjct: 735 TIADLSAVDPDTGFNGKLVYVISDGNDDSCFTIDLELGLLQVLSPLDHERTSFYILNITV 794
Query: 71 EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
G Q SS + + V D ND P+F Y ++PE G + ++ A DAD
Sbjct: 795 YDLGTPQK----SSWKLLAVNVLDTNDNTPKFPQGAYWVAIPEHVATGTTIAQLKAEDAD 850
Query: 130 EGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
N V YS+ P D F +++ TG++ ALD E Y+ ++
Sbjct: 851 TDDNGRVKYSLLSPTD-KFAINSVTGEVTVTGALDRELWPYYVLKI 895
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 36/184 (19%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN---------- 65
S+ Y A D +G +MQV+A D+D G + Y L N + +F+
Sbjct: 1558 SIHYEAEVLDSAVVGTEIMQVRALDQDQGANAEIHYSLQAGNGEG--FFSIDLYSGIITV 1615
Query: 66 ---LDPATEHQGPI----QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
LDP+ + + + +D+G L +ATV++R+ + P+F Y + E +
Sbjct: 1616 AQKLDPSRQERFTLIVKAEDQGFPQLKDSATVHVRIRPSDRTPPKFPEAEY---ITEISE 1672
Query: 117 GLAVG----RVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
+AVG +V AT + V Y + + D F ++ +G I T K+LD+E+ Y
Sbjct: 1673 SIAVGSPLIQVSATSL-----SPVSYEIKDGNGDGVFSMNYQSGLISTQKSLDFEQVSFY 1727
Query: 170 LERV 173
+V
Sbjct: 1728 QLKV 1731
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 71/164 (43%), Gaps = 28/164 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGG-------- 81
G T+ Q+KA D D+ G V+Y LL + TD + ++ G + E
Sbjct: 838 GTTIAQLKAEDADTDDNGRVKYSLL-SPTDKFAINSVTGEVTVTGALDRELWPYYVLKIE 896
Query: 82 ----------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRV----HATD 127
L S + + + D+ND P Q LP +V +D L VG + D
Sbjct: 897 ARDQPKTGYELFSVTDLTVTLEDVNDNTP--QCLPALNNVKVPED-LPVGTILLFLEVFD 953
Query: 128 ADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D G V YS+ E++ F +D TG +R K LDYEK+ Y
Sbjct: 954 PDTGSGGEVRYSLISDEEMMFHMDKLTGALRLEKELDYEKKDSY 997
Score = 42.4 bits (98), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 64/165 (38%), Gaps = 24/165 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA---TEHQGP 75
Y +D E G L QV ATDKD G G + Y ++ YF +DP + P
Sbjct: 2076 YYTSVQDGTEPGDVLFQVSATDKDIGDNGAITYSFAED----YKYFWIDPYLGDISLKKP 2131
Query: 76 I--------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVG 121
+ +D+G A + ++ N NP FQSL Y VPE L
Sbjct: 2132 LDYQALNKYNLRVIAKDKGEPPLHAEEEVVISVRNKSNPLFQSLYYRVKVPENIP-LYTS 2190
Query: 122 RVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYE 164
+H ++Y V ED F D TG + LDYE
Sbjct: 2191 ILHIQARSPEGLRLIYNIVEEDSLKLFSTDFKTGVLTVTGQLDYE 2235
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 73/177 (41%), Gaps = 35/177 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------ 82
+G L+ ++ D D+G G V Y L+ +D F++D T G ++ E L
Sbjct: 942 VGTILLFLEVFDPDTGSGGEVRYSLI---SDEEMMFHMDKLT---GALRLEKELDYEKKD 995
Query: 83 -----------------SSTATVNIRVTDINDK--NPEFQSLPYEFSVPEGQ-DGLAVGR 122
SS + + + D+N+ P F S ++ V E +G +V
Sbjct: 996 SYNLTVQVSDGGKPFSRSSLCHLEVNILDVNENLHPPRFASFVFKGWVQENSPEGTSVMM 1055
Query: 123 VHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
V A D D+G++ V Y E F ++ +TG IRT LD E Y V +
Sbjct: 1056 VTAKDIDKGKDGEVQYFFREGTGLSVFSIEKDTGTIRTTGPLDREGTSHYWLTVLAL 1112
Score = 38.9 bits (89), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV--PE 142
A V I + D ND P F Y+ S+ E V + ATDAD GQNA YY++
Sbjct: 135 AKVLIHILDRNDLKPLFSPPSYKVSIREDTPLKTVVCTLSATDADAGQNAEFYYALNTKS 194
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKF 179
D+ F V TG + T L+ + + +V + +
Sbjct: 195 DL-FTVHPTTGAVMTTGRLNSTHRGRHHLQVLAVDRM 230
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 47/114 (41%), Gaps = 24/114 (21%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE----------HQGPI-------QDEG 80
ATD D L+ Y +L+ T+A YF +DP+T P+ D G
Sbjct: 1790 ATDADQDSNALLVYEILE--TEALKYFTVDPSTGTLTSRADIDYELTPVFHFSVHAHDSG 1847
Query: 81 G----LSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDAD 129
S A V I V D+ND P F YE SV G+ + V A DAD
Sbjct: 1848 NPSLFASKPAKVTIHVKDVNDSPPVFSKDNYELSVLLPAHPGMELLSVQAKDAD 1901
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 73/182 (40%), Gaps = 26/182 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EH 72
S + ++ G ++M V A D D GK G V+Y + S F+++ T
Sbjct: 1036 SFVFKGWVQENSPEGTSVMMVTAKDIDKGKDGEVQYFFREGT--GLSVFSIEKDTGTIRT 1093
Query: 73 QGPIQDEGG----------------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ- 115
GP+ EG LSS + I VTD ND P+ + SV E
Sbjct: 1094 TGPLDREGTSHYWLTVLALDLGTIPLSSVTEIYIEVTDTNDNPPQMSRPVFYTSVMENSP 1153
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIR-TNKALDYEKQQLYLE 171
+V ++ A D D + + + P F ++ TG I T++ LD E + ++
Sbjct: 1154 PNTSVLQLDALDPDSSSEGKLTFHILTGNPQGLFTINLITGLISTTSRQLDREYKAEHIL 1213
Query: 172 RV 173
V
Sbjct: 1214 EV 1215
>gi|347971375|ref|XP_313053.5| AGAP004166-PA [Anopheles gambiae str. PEST]
gi|333468639|gb|EAA08664.6| AGAP004166-PA [Anopheles gambiae str. PEST]
Length = 1994
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLD----NNTDAASYFNLD-------------PAT 70
E+G + ++ A D D K V Y ++ N+ + SYF +D P T
Sbjct: 1175 EVGKVIFKLTANDDDFEKNSKVFYEVVGQTELNSGERVSYFRIDRNNGELRVANRLPPET 1234
Query: 71 EHQGPI--QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ---DGLAVGRVHA 125
+ + I +D GGLS V RV D+ND P F+ Y F+V EG G +G+V A
Sbjct: 1235 DVKLNITAKDVGGLSDMLQVQFRVYDVNDNAPVFEKQWYTFNVDEGSYPITGKKIGQVRA 1294
Query: 126 TDADEGQNAVVYYSVPED----IPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
D D G N V Y + D IPF + G IR + +D E Y RV
Sbjct: 1295 NDEDTGMNGNVTYMLITDGDQKIPFSISPLDGTIRVSGEIDREMIASYRFRVL 1347
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 34/174 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGPI 76
G +++QV A D+D G+ Y L+D A F +D + E + +
Sbjct: 388 GFSILQVNAIDRDQGENAEFYYYLMDEEPKGA--FMIDHGSGWIVVRDETFLDKEQRSSL 445
Query: 77 Q------------DEGGLSSTATVNIRVTDINDKNPEF-QSLPYEFSV-PEGQDGLAVGR 122
+ D V I + D ND PEF Q YEF G VG+
Sbjct: 446 KMNVHAVERVEQYDRSRNYGKVQVEITLLDTNDNTPEFEQGTLYEFKTHCNASIGSKVGQ 505
Query: 123 VHATDADEGQNAVVYYSVPED-----IPFVVDANTGDIRTNKALDYEKQQLYLE 171
+ A D D+ N + YS+ IPF++D +TGDIR ++AL Y K ++E
Sbjct: 506 IRALDPDDLGNGKIQYSIKNVRPNLVIPFLLDPDTGDIRVSEALTYGKIAFFVE 559
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVP 141
S+ A V+I V D+ND PEF+ Y S+ E G ++ +V+A D D+G+NA YY +
Sbjct: 353 SAFARVDIEVIDLNDNVPEFEVDLYNISIIENLPKGFSILQVNAIDRDQGENAEFYYYLM 412
Query: 142 EDIP---FVVDANTGDI--RTNKALDYEKQ 166
++ P F++D +G I R LD E++
Sbjct: 413 DEEPKGAFMIDHGSGWIVVRDETFLDKEQR 442
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 88 VNIRVTDINDKNPEFQSL--PYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI 144
+ I+V D+ND P F+ P VP+ + G AV +V ATD D G N V Y++ +
Sbjct: 1621 IMIKVVDVNDNAPVFRDNYGPIISVVPDTANYGYAVMKVEATDDDAGSNGEVRYTLLNEP 1680
Query: 145 P--FVVDANTGDIRTNKALDYEKQQLY 169
P F +D+ TG IR +L K++++
Sbjct: 1681 PRLFAIDSLTGQIRLLNSLASFKEKVF 1707
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ--DGLAVGRVHATDADEGQ--NAVVYY 138
SS T+ + + DIND +PEF +LPY ++ E + + R+ A D D+ N+ + Y
Sbjct: 124 SSFFTITVYIEDINDNDPEFINLPYVVTLDESTPIETVVFNRIKAIDRDKPNTPNSDLEY 183
Query: 139 SVPE------DIPFVVDANTG-DIRTNKALDYE 164
++ D PF ++ + + +ALDY+
Sbjct: 184 ALAAKHMKSGDFPFRLEGSQRPSLVLQRALDYD 216
>gi|449267275|gb|EMC78241.1| Protocadherin Fat 4, partial [Columba livia]
Length = 3610
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------E 71
+G T++ V ATD D G G ++Y L A+ F+LD T E
Sbjct: 2335 VGSTIVIVTATDADEGLNGCIKYSLKKATDLASEIFHLDVETGAIALVRSLDFEEGDTYE 2394
Query: 72 HQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE 130
+D GGL TA V I VTD+ND P+ + E Q G V +H D D
Sbjct: 2395 MDVQARDSGGLFDTAKVTITVTDVNDNAPKISVRSSLSEISEDAQSGTVVALLHVQDRDS 2454
Query: 131 GQNAVVYYSVPEDIPFVVDANTG---DIRTNKALDYEKQQLY 169
G N V S+ D+PF++ ++ G + T + LD E+ Y
Sbjct: 2455 GANGEVRCSLDGDVPFLLRSSRGSYYSVVTARELDREQVSEY 2496
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 73/163 (44%), Gaps = 23/163 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------E 71
+G TL+ V ATD D G G V+Y L ++ F+LD T E
Sbjct: 511 VGSTLVIVTATDPDEGLNGYVKYSLKKAMDLSSEIFHLDVETGAITLVRSLDFEEGDSYE 570
Query: 72 HQGPIQDEGGLSSTATVNIRVTDINDKNPE--FQSLPYEFSVPEGQDGLAVGRVHATDAD 129
+D GGLS TA V I VTDIND PE +S E S + G V +H D D
Sbjct: 571 MDVQARDGGGLSDTARVAITVTDINDNAPEVSVRSALREIS-EDAPSGTVVALLHVQDRD 629
Query: 130 EGQNAVVYYSVPEDIPFVVDANTG---DIRTNKALDYEKQQLY 169
G N V S+ D+PF + + G + T + LD E+ Y
Sbjct: 630 SGANGEVRCSLDGDVPFRLHRSRGSYYSVVTARELDREQVSEY 672
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 80/190 (42%), Gaps = 32/190 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A R+ G T++ V A+D D+G + Y + F +DP
Sbjct: 3192 YRASLREDAPPGSTVLNVSASDADAGTNARITYSFGETPAKVLQKFAVDPEGGMITLQEA 3251
Query: 69 -----ATEHQGPIQD-----EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
E Q + +GG S+ ++I V D ND P F Y+ SV E
Sbjct: 3252 LDFEDTREEQRELHLVLTALDGGSPPRSAHVQIHIEVVDANDNAPVFNQSTYKASVRENT 3311
Query: 116 -DGLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQL 168
G V R+ A D D+G N + YS P F +D+ TG++R LDYE+ +L
Sbjct: 3312 PSGTLVARISAYDLDDGPNGDIVYSFSSHTPAKVRELFALDSATGELRVKGQLDYEETKL 3371
Query: 169 YLERVFLISK 178
Y ++L +K
Sbjct: 3372 Y--EIYLQAK 3379
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 68/162 (41%), Gaps = 21/162 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-----------------ATE 71
+G TL+ V ATD D G G V+Y L A+ F LD + E
Sbjct: 1689 VGSTLVTVTATDADDGVNGHVKYSLKKITEKASQIFQLDAEKGAITLVRSLDFEEGDSYE 1748
Query: 72 HQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADE 130
+ +D G L TA V I VTD+ND PE + E G V +H D D
Sbjct: 1749 LEVQARDGGVLFDTARVAIVVTDVNDNMPEISVRSARSKISEDSPPGTVVALLHVQDRDS 1808
Query: 131 GQNAVVYYSVPEDIPFVVDANTG---DIRTNKALDYEKQQLY 169
G N V S+ D PF + ++ G + T + LD E+ Y
Sbjct: 1809 GANGEVRCSLEGDDPFRLRSSRGSYYSVVTARELDREQVSEY 1850
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 68/162 (41%), Gaps = 21/162 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------E 71
+G TL+ V ATD D+G G V+Y L A+ F LD T E
Sbjct: 830 VGSTLVTVIATDPDAGLNGHVKYSLKKITEIASQIFQLDSETGAITLVRSLDFEEGDTYE 889
Query: 72 HQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADE 130
+ +D G L TA I VTD+ND PE + V E G V +H D D
Sbjct: 890 VEVQARDGGELFDTAKFVITVTDVNDNPPELTVMSQLSEVSEDSPSGTVVALLHVQDWDS 949
Query: 131 GQNAVVYYSVPEDIPFVVDANTG---DIRTNKALDYEKQQLY 169
G N V S+ D+PF + + + T + LD E+ Y
Sbjct: 950 GPNGEVRCSLDGDVPFRLHRSRSSYYSVVTARELDREQVSEY 991
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 74/164 (45%), Gaps = 27/164 (16%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRL-----LDNNTDAASYFNL--------DPATEHQGPIQ 77
V L+ V+ D+DSG G V L + SY+++ + +E+ ++
Sbjct: 620 VALLHVQ--DRDSGANGEVRCSLDGDVPFRLHRSRGSYYSVVTARELDREQVSEYNVTVR 677
Query: 78 DEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQ 132
G L S+A + +RV D+ND P F Y VPE +G V RV A DAD GQ
Sbjct: 678 AADGGSPALCSSAVLWLRVLDVNDNAPVFAEARYSARVPENNAEGALVLRVRAWDADWGQ 737
Query: 133 NAVVYYSVPEDIPFVVDANTG-------DIRTNKALDYEKQQLY 169
NA V Y + D F + TG ++ KALD E+ +
Sbjct: 738 NARVRYELSGDEHFSLAVQTGPGGDQRPELVLAKALDREEAAFH 781
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 78/189 (41%), Gaps = 38/189 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--------------- 63
Y A + + G +++V A D D+G G V Y L + DAA+Y
Sbjct: 2098 YSAYVAENNAAGAPMLRVLARDPDAGSNGRVSYWLSGGSADAAAYVSVEARSGALYAQRS 2157
Query: 64 FNLDPATEHQGPIQDEGG----LSSTATVNIRVTDINDKNPEF----------------Q 103
F+ + E ++ + G SSTATV + V D ND P
Sbjct: 2158 FDYEQCREFAVVVRAQDGGEPARSSTATVRVFVLDRNDNAPRVLWPAPEAGERVPGSAPA 2217
Query: 104 SLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKA 160
P+E + G V +V A DAD G+NA + Y + E F V ++G++ KA
Sbjct: 2218 LEPFEVVPRSAEAGYLVAKVVAVDADAGRNAWLSYELVQAAEPALFRVGLHSGELVLAKA 2277
Query: 161 LDYEKQQLY 169
LD E+ +
Sbjct: 2278 LDREEAAFH 2286
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 73/165 (44%), Gaps = 23/165 (13%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------------ASYFNLDPATEHQG 74
E G + +V A D D+G+ + Y L+ A A + + A H+
Sbjct: 2229 EAGYLVAKVVAVDADAGRNAWLSYELVQAAEPALFRVGLHSGELVLAKALDREEAAFHEL 2288
Query: 75 PIQ--DEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
++ D G + T T IRV D ND P F Y VPE G + V ATDAD
Sbjct: 2289 VLRASDGGEPARTGTARIRVAVLDANDNAPVFSQAEYTVRVPEDVPVGSTIVIVTATDAD 2348
Query: 130 EGQNAVVYYSVPE--DIP---FVVDANTGDIRTNKALDYEKQQLY 169
EG N + YS+ + D+ F +D TG I ++LD+E+ Y
Sbjct: 2349 EGLNGCIKYSLKKATDLASEIFHLDVETGAIALVRSLDFEEGDTY 2393
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY 137
E + TA + + V D ND P F Y VPE G + V ATDADEG N +
Sbjct: 145 EPARTGTARIRVAVLDANDNAPVFSQAEYTVRVPEDVPVGSTLVTVTATDADEGPNGHLK 204
Query: 138 YSVPE------DIPFVVDANTGDIRTNKALDYEKQQLY 169
YS+ + DI F +DA TG I ++LDYEK Y
Sbjct: 205 YSLKKATDMALDI-FRLDAETGAITLVRSLDYEKDDSY 241
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 74/177 (41%), Gaps = 26/177 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP--- 75
Y A + + G +++V+A D D G+ V L +A YF ++ +G
Sbjct: 1030 YSARLPENNAAGALVLRVRAWDADWGQNARVRNSLQGYALEANGYFAVEVKRSPEGNKFA 1089
Query: 76 ---IQDEGGL--------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDG 117
++ E L S TA + I VTD ND P F Y S+ E G
Sbjct: 1090 ELVLEREPSLRLVLTALDGGDPPRSGTAQLCINVTDANDNAPVFAQDRYRASLREDAPPG 1149
Query: 118 LAVGRVHATDADEGQNAVVYY---SVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
V V A+DAD G NA + Y +P + FVVD +G I + LD+E Y
Sbjct: 1150 STVLNVSASDADSGTNARITYVFGQMPAKVLKKFVVDVESGMIILKETLDFEDTSGY 1206
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 66/163 (40%), Gaps = 23/163 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------E 71
+G TL+ V ATD D G G ++Y L A F LD T E
Sbjct: 183 VGSTLVTVTATDADEGPNGHLKYSLKKATDMALDIFRLDAETGAITLVRSLDYEKDDSYE 242
Query: 72 HQGPIQDEGGLSSTATVNIRVTDINDKNPEF--QSLPYEFSVPEGQDGLAVGRVHATDAD 129
+ D GGL V I VTD+ND PE S E S + G V ++ D D
Sbjct: 243 MEVQTHDGGGLFDKTKVTITVTDVNDNPPEITVSSAVSEIS-EDAPPGTMVALLYVQDRD 301
Query: 130 EGQNAVVYYSVPEDIPFVVDANTG---DIRTNKALDYEKQQLY 169
G N V S+ +PF + ++ G + + LD E+ Y
Sbjct: 302 SGANGEVRCSLEGAVPFRLQSSRGSYYSVVIARELDREQVSEY 344
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 71/167 (42%), Gaps = 38/167 (22%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASY---------------FNLDPATEHQGPIQ 77
+++V A D DSG G V Y L + DAA+Y F+ + E ++
Sbjct: 1364 VLRVLAQDADSGANGRVSYWLESGSADAAAYVSVEARSGALYAQRSFDYEQCREFAVVVR 1423
Query: 78 DEGG----LSSTATVNIRVTDINDKNPEF----------------QSLPYEFSVPEGQDG 117
+ G SSTATV + V D ND P P+E + G
Sbjct: 1424 AQDGGEPARSSTATVRVFVLDRNDNAPRVLWPAPEAGERVPGSAPALEPFEVVPRSAEAG 1483
Query: 118 LAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL 161
V +V A DAD G+NA + Y + E F V ++G++RT +A+
Sbjct: 1484 YLVAKVVAVDADAGRNAWLSYELVQAAEPALFRVGLHSGEVRTARAV 1530
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 24/161 (14%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDNN-----TDAASYFNL--------DPATEHQGPIQ 77
V L+ V+ D+DSG G V L ++ + SY+++ + +E+ ++
Sbjct: 1798 VALLHVQ--DRDSGANGEVRCSLEGDDPFRLRSSRGSYYSVVTARELDREQVSEYNVTVR 1855
Query: 78 DEGGLS---STATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQN 133
G S TA + I VTD ND P F Y S+ E G V V A+DAD G N
Sbjct: 1856 AVDGGSPALGTAQLCINVTDANDNTPVFAQDRYRASLREDAPPGSTVLNVSASDADAGTN 1915
Query: 134 AVVYYS---VPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
A + YS +P + F+VDA +G I +ALD+E + +
Sbjct: 1916 ARITYSFGKMPAKVLQKFMVDAESGMIMLQEALDFEDTRSF 1956
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 75/187 (40%), Gaps = 36/187 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA----SYFNLDPATEHQG 74
Y A + + G +++V+A D D G+ V Y L + A +F+L T G
Sbjct: 383 YSARVPENNAAGALVLRVRAWDADWGQNARVRYWLGEGRVRGAPLGDEHFSLAVQTGPGG 442
Query: 75 PIQDE-----------------------GG---LSSTATVNIRVTDINDKNPEFQSLPYE 108
+ E GG + TA + + V D ND P F Y
Sbjct: 443 DQRPELVLAKALDREEAAFHELMLRATDGGEPARTGTARIRVEVLDANDNTPVFSQAEYT 502
Query: 109 FSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP-----FVVDANTGDIRTNKALD 162
VPE G + V ATD DEG N V YS+ + + F +D TG I ++LD
Sbjct: 503 VRVPEDVPVGSTLVIVTATDPDEGLNGYVKYSLKKAMDLSSEIFHLDVETGAITLVRSLD 562
Query: 163 YEKQQLY 169
+E+ Y
Sbjct: 563 FEEGDSY 569
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 60/130 (46%), Gaps = 20/130 (15%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRL-----LDNNTDAASYFNL--------DPATEHQGPIQ 77
V L+ V+ D+DSG G V L + SY+++ + +E+ +Q
Sbjct: 292 VALLYVQ--DRDSGANGEVRCSLEGAVPFRLQSSRGSYYSVVIARELDREQVSEYNLTVQ 349
Query: 78 DEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQ 132
G L S+A + +RV D+ND P F Y VPE G V RV A DAD GQ
Sbjct: 350 AADGGSPALWSSAVLRLRVLDVNDNAPVFAEARYSARVPENNAAGALVLRVRAWDADWGQ 409
Query: 133 NAVVYYSVPE 142
NA V Y + E
Sbjct: 410 NARVRYWLGE 419
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 68/162 (41%), Gaps = 23/162 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------E 71
+G TL+ V A D+ G G VEY + A LD T +
Sbjct: 2767 VGSTLVTVTAADE--GLNGHVEYSFHKISGRAPDIIKLDSETGEIFLKECLDFEEFSSLD 2824
Query: 72 HQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADE 130
+ +D G LS+ A V I V+D+ND PE + E G+ V +H D D
Sbjct: 2825 LEVQARDGGDLSNMAKVTITVSDVNDNAPEISVRSSLSEISEDSPAGIVVALLHVQDRDS 2884
Query: 131 GQNAVVYYSVPEDIPFVVDA---NTGDIRTNKALDYEKQQLY 169
G N V S+ E IPF ++ N + T++ LD E+ Y
Sbjct: 2885 GPNGEVRCSISEKIPFRLEKSFENYYRVVTSRELDREQVSEY 2926
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 24/153 (15%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDN-----NTDAASYFNL--------DPATEHQGPIQ 77
V L+ V+ D+DSG G V L + + SY+++ + +E+ ++
Sbjct: 2444 VALLHVQ--DRDSGANGEVRCSLDGDVPFLLRSSRGSYYSVVTARELDREQVSEYNVTVR 2501
Query: 78 DEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQ 132
G L S+A + +RV D+ND P F Y +PE G+ V RV A DAD GQ
Sbjct: 2502 AADGGSPALWSSAVLWLRVLDVNDNAPVFAEARYSARLPENNAAGVLVLRVRAWDADWGQ 2561
Query: 133 NAVVYYSVPEDIPFVVDANTGDIRTNKALDYEK 165
NA V + F V +G++ ++ LD E+
Sbjct: 2562 NA----RVRQLQYFTVSGESGNLYMSERLDREE 2590
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 76/177 (42%), Gaps = 31/177 (17%)
Query: 18 FYGAMARDK---------HEL---GVTLMQVKATDKDSGKFG-LVEYRLLDNNTDAASYF 64
FY MA D +EL G ++VK + D KF LV R LD +A+
Sbjct: 3097 FYLGMAEDADVGSNSLQGYELEANGYFAVEVKES-PDGSKFAELVLRRALDREREASLRL 3155
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
L P S TA + I VTD ND P F Y S+ E G V V
Sbjct: 3156 VLTALDGGDPP------RSGTAQLCINVTDANDNTPVFAQDRYRASLREDAPPGSTVLNV 3209
Query: 124 HATDADEGQNAVVYYS---VPEDI--PFVVDANTGDIRTNKALDY-----EKQQLYL 170
A+DAD G NA + YS P + F VD G I +ALD+ E+++L+L
Sbjct: 3210 SASDADAGTNARITYSFGETPAKVLQKFAVDPEGGMITLQEALDFEDTREEQRELHL 3266
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS 139
L S+A + +RV D+ND P F Y +PE G V RV A D D GQN V Y
Sbjct: 2939 ALWSSAVLWLRVLDVNDNAPVFAEARYSARLPENNAVGAPVLRVRAWDTDLGQNVGVRYR 2998
Query: 140 V--------PEDIPFVVDANTGDIRTNKALDYEK 165
+ P V+A TG + ++ DYE+
Sbjct: 2999 LGEGRVRGAPLSSSVSVEAETGALYALRSFDYEE 3032
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 74/178 (41%), Gaps = 27/178 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-----------------A 61
Y A + + G +++V+A D D G+ V Y L + + A
Sbjct: 711 YSARVPENNAEGALVLRVRAWDADWGQNARVRYELSGDEHFSLAVQTGPGGDQRPELVLA 770
Query: 62 SYFNLDPATEHQGPIQ--DEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQD- 116
+ + A H+ ++ D G + T T IRV D ND P F Y VPE
Sbjct: 771 KALDREEAAFHELVLRASDGGEPARTGTARIRVAVLDANDNAPVFSQAEYTVRVPEDVPV 830
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPEDIP-----FVVDANTGDIRTNKALDYEKQQLY 169
G + V ATD D G N V YS+ + F +D+ TG I ++LD+E+ Y
Sbjct: 831 GSTLVTVIATDPDAGLNGHVKYSLKKITEIASQIFQLDSETGAITLVRSLDFEEGDTY 888
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY 137
E + TA + + V D ND P F Y VPE G + V ATDAD+G N V
Sbjct: 1651 EPARTGTARIRVAVLDANDNAPVFSQAEYTVRVPEDVPVGSTLVTVTATDADDGVNGHVK 1710
Query: 138 YSVPEDIP-----FVVDANTGDIRTNKALDYEKQQLY 169
YS+ + F +DA G I ++LD+E+ Y
Sbjct: 1711 YSLKKITEKASQIFQLDAEKGAITLVRSLDFEEGDSY 1747
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 12/117 (10%)
Query: 61 ASYFNLDPATEHQGPI--QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
AS + + A EH+ + +D G LSS+ + + V+D+ND P F+ Y V E
Sbjct: 1298 ASALDREQAAEHRVTVVARDRGRPSLSSSTALVLEVSDVNDNAPVFEEAAYSAYVAENNA 1357
Query: 117 GLA---VGRVHATDADEGQNAVVYYSV----PEDIPFV-VDANTGDIRTNKALDYEK 165
A V RV A DAD G N V Y + + +V V+A +G + ++ DYE+
Sbjct: 1358 AGAPAPVLRVLAQDADSGANGRVSYWLESGSADAAAYVSVEARSGALYAQRSFDYEQ 1414
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
L S+A + +RV D+ND P F Y +PE G V RV A DAD GQNA V S
Sbjct: 1004 ALWSSAVLWLRVLDVNDNAPVFAEARYSARLPENNAAGALVLRVRAWDADWGQNARVRNS 1063
Query: 140 V 140
+
Sbjct: 1064 L 1064
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 78/181 (43%), Gaps = 23/181 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSG-------KFGLVEYRLLDN-NTDAAS-YFNLDPA 69
Y A R+ G T++ V A+D D+G FG + ++L DA S L A
Sbjct: 1888 YRASLREDAPPGSTVLNVSASDADAGTNARITYSFGKMPAKVLQKFMVDAESGMIMLQEA 1947
Query: 70 TEHQGP--------IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAV 120
+ + +D GGL + + V I V D+ND PE VPE G V
Sbjct: 1948 LDFEDTRSFSLAVEAKDGGGLVAHSKVEIEVLDVNDNEPEITLTLVSSPVPENAPVGTVV 2007
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDANTG---DIRTNKALDYEKQQLYLERVFLIS 177
++ D D G+N V + + P + A +G + T ALD ++Q RV +++
Sbjct: 2008 AFLNVNDPDSGENGDVSCELSGEAPLSLVALSGGSYKVVTASALD--REQAAEHRVTVVA 2065
Query: 178 K 178
+
Sbjct: 2066 R 2066
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 70/175 (40%), Gaps = 24/175 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN-TDAASYFNLDPATEH---QG 74
Y A R+ G + ++ A D D G G + Y + F LD AT +G
Sbjct: 3303 YKASVRENTPSGTLVARISAYDLDDGPNGDIVYSFSSHTPAKVRELFALDSATGELRVKG 3362
Query: 75 PI--------------QDEGGLSSTA--TVNIRVTDINDKNPEFQSLPYEFSVPE-GQDG 117
+ +D+G + A V + V D+ND +PE VPE G
Sbjct: 3363 QLDYEETKLYEIYLQAKDKGAVPGVAHCKVLVEVVDVNDNSPEVTVTSVYSPVPEDAAPG 3422
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
V + TD D N VV + IPF++ ++ + ++T ALD EK Y
Sbjct: 3423 TVVALLSVTDLDSHDNGVVNCFISPGIPFMLSSSLKNYYTLKTKAALDREKASEY 3477
Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 8/101 (7%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAV 135
+D GGL + V + V D+ND PE L VPE G V ++ D D G N
Sbjct: 2618 RDRGGLLAHCKVEVEVLDVNDNAPEITMLSVSSPVPEDVPAGTVVALLNVNDRDSGVNGE 2677
Query: 136 VYYSVPEDIPFVVDANTG-------DIRTNKALDYEKQQLY 169
V Y + D F + TG ++ KALD E+ +
Sbjct: 2678 VSYELSGDEHFSLAVQTGPGGDQRPELVLAKALDREEAAFH 2718
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 61 ASYFNLDPATEHQGPI--QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ- 115
AS + + A EH+ + +D G LSS+ + + V+D+ND P F+ Y V E
Sbjct: 2048 ASALDREQAAEHRVTVVARDRGRPSLSSSTALVLEVSDVNDNAPVFEEAAYSAYVAENNA 2107
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV----PEDIPFV-VDANTGDIRTNKALDYEK 165
G + RV A D D G N V Y + + +V V+A +G + ++ DYE+
Sbjct: 2108 AGAPMLRVLARDPDAGSNGRVSYWLSGGSADAAAYVSVEARSGALYAQRSFDYEQ 2162
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 68/164 (41%), Gaps = 31/164 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-----------------ASYFNLDPATEH 72
G + + D+DSG G V Y L + + A + + A H
Sbjct: 2659 GTVVALLNVNDRDSGVNGEVSYELSGDEHFSLAVQTGPGGDQRPELVLAKALDREEAAFH 2718
Query: 73 QGPIQ--DEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQDGLAVGR--VHAT 126
+ ++ D G + T T IRV D ND P F Y VPE + VG V T
Sbjct: 2719 ELVLRASDGGEPAQTGTARIRVAVLDANDNAPVFSQAEYTVRVPE---DVPVGSTLVTVT 2775
Query: 127 DADEGQNAVVYYS---VPEDIPFVV--DANTGDIRTNKALDYEK 165
ADEG N V YS + P ++ D+ TG+I + LD+E+
Sbjct: 2776 AADEGLNGHVEYSFHKISGRAPDIIKLDSETGEIFLKECLDFEE 2819
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 73/181 (40%), Gaps = 23/181 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A R+ G T++ V A+D DSG + Y F +D +
Sbjct: 1138 YRASLREDAPPGSTVLNVSASDADSGTNARITYVFGQMPAKVLKKFVVDVESGMIILKET 1197
Query: 71 ----EHQG-----PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAV 120
+ G +D GGL + V++ V D+ND PE VP + G V
Sbjct: 1198 LDFEDTSGYTLLVEARDGGGLLAHCEVDVEVLDVNDNEPEMTLTSVSSPVPADAPVGTVV 1257
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDANTG---DIRTNKALDYEKQQLYLERVFLIS 177
++ D D +N V + + P + A++G + T ALD ++Q RV +++
Sbjct: 1258 ALLNVYDPDSRENGEVSCELLGEAPLSLVASSGGSYKVVTASALD--REQAAEHRVTVVA 1315
Query: 178 K 178
+
Sbjct: 1316 R 1316
Score = 36.2 bits (82), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LS+ + ++V+D+ND P+ Y+ V E G+ + + ATD D G+NA + YS+
Sbjct: 3491 LSAVKQILVQVSDVNDNAPKTSQDSYDVYVLENNVPGIPILNISATDPDLGRNAHLSYSL 3550
Query: 141 PE-DIPFVVDANTGDIRTNKALDYEKQ 166
+ F ++ G + +LD+E Q
Sbjct: 3551 LQAGHIFSINRENGTLYLLTSLDHEDQ 3577
>gi|229442261|gb|AAI72773.1| FAT tumor suppressor 1 precursor [synthetic construct]
Length = 1338
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 17/132 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI-- 76
L +M+VK TD DSG +G V Y ++++ Y N LD T + I
Sbjct: 431 LHTLVMEVKTTDGDSGIYGHVTYHIVNDFAKDRFYINERGQIFTLEKLDRETPAEKVISV 490
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEG 131
+D GG + TVN+ +TD ND P+F++ YE ++ G +V +V A+DADEG
Sbjct: 491 RLMAKDAGGKVAFCTVNVILTDDNDNAPQFRATKYEVNIGSSAAKGTSVVKVLASDADEG 550
Query: 132 QNAVVYYSVPED 143
NA + Y++ D
Sbjct: 551 SNADITYAIEAD 562
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 75/160 (46%), Gaps = 23/160 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ ATD D + Y LL + A F L+P T E Q
Sbjct: 963 GKLIMQISATDADIRSNAEITYTLLGS---GAEKFKLNPDTGELKTSTPLDREEQAVYHL 1019
Query: 78 -----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D GG A++ + + D+ND PEF + PY +V E + G + RV ATDAD G
Sbjct: 1020 LVRATDGGGRFCQASIVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDADAG 1079
Query: 132 QNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
N + YS+ + D F ++ +G I+ K LD E Q +Y
Sbjct: 1080 LNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVY 1119
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKN 99
D+ SG+ L + LD+ T F++ QD+ + ++ V+I+V D ND +
Sbjct: 678 DRQSGRLKL--EKSLDHETTKWYQFSILARC-----TQDDHEMVASVDVSIQVKDANDNS 730
Query: 100 PEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI------PFVVDANT 152
P F+S PYE F V G V ++ A+DAD G N V YS+ + F ++ T
Sbjct: 731 PVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMET 790
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G I T K LD+EK+ Y +V
Sbjct: 791 GWITTLKELDHEKRDNYQIKV 811
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 25/169 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--------TDAASYF---NLD 67
YGA + +G ++QV A +D + Y ++ N + + F NLD
Sbjct: 1159 YGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLD 1218
Query: 68 PATEHQGPIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--- 118
+ H+ + E GG LS ATVN+ VTDIND P F Y + E D +
Sbjct: 1219 YESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISE--DAVLEQ 1276
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
+V V A DAD N+ ++YS+ + F +D G+++ K LD E
Sbjct: 1277 SVITVMADDADGPSNSHIHYSIIDGNQGSSFTIDPVRGEVKVTKLLDRE 1325
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 75/172 (43%), Gaps = 21/172 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + E G L +V+ATD D+G + Y L+D+ S L + + P+
Sbjct: 1054 YAITVFENTEPGTLLTRVQATDADAGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDR 1113
Query: 78 -------------DEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAV 120
D+G L++T TV + V DIND P F+ Y +V E G V
Sbjct: 1114 ELQAVYTLSLKAVDQGLPRRLTATGTVIVSVLDINDNPPVFEYREYGATVSEDILVGTEV 1173
Query: 121 GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V+A D NA + YS+ E F +D+ TG + + LDYE Y
Sbjct: 1174 LQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEY 1225
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 23/160 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + +G +++QV+ATD DS + Y++ N++ + +F++D +T
Sbjct: 212 YAVTLSEASVIGTSVVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRT 271
Query: 71 -------EHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
+H ++ +GG LSS V + VTD+ND P F+ YE + E G
Sbjct: 272 LDYEQSRQHTIFVRAVDGGMPTLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPHGH 331
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
V V A DAD + YS+ + FV+D+ TG I
Sbjct: 332 FVTCVKAYDADSSDIDKLQYSILSGNDHKHFVIDSATGII 371
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVY 137
+G SS A V ++V D ND +P + Y ++PE G + ++ ATDAD NA +
Sbjct: 924 DGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPEDVLPGKLIMQISATDADIRSNAEIT 983
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ F ++ +TG+++T+ LD E+Q +Y
Sbjct: 984 YTLLGSGAEKFKLNPDTGELKTSTPLDREEQAVY 1017
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 75/173 (43%), Gaps = 36/173 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLD--------------------- 67
G ++Q++A+D DSG G V Y L + + F ++
Sbjct: 749 GSRVIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQ 808
Query: 68 ---PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRV 123
A++H IQ LSSTA V++ VTD+ND P F + Y+ +V E G + +
Sbjct: 809 IKVVASDHGEKIQ----LSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSEDDPQGGVIAIL 864
Query: 124 HATDAD-EGQNAVVYYSVPEDIP---FVVDA--NTGDIRTNKALDYEKQQLYL 170
TDAD E N V Y + P F V+ N + K LD EK+ YL
Sbjct: 865 STTDADSEEINRQVTYFITGGDPLGQFAVETIQNEWKVYVKKPLDREKRDNYL 917
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 34/178 (19%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
+L Y A+ + E+G + V A D+DSG+ G V Y L +++ +F + P E
Sbjct: 7 NLPYYAVVKVDTEVGHVIRYVTAVDRDSGRNGEVHYYLKEHH----EHFQIGPLGEISLK 62
Query: 76 IQ-----------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
Q D G + +A V + +T +N P F+ Y + E
Sbjct: 63 KQFELDTLNKEYLVTVVAKDGGNPAFSAEVIVPITVMNKAMPVFEKPFYSAEIAESI--- 119
Query: 119 AVGRVHA----TDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+VH+ A+ + V+YS+ + P F ++ NTG I LD+E Y
Sbjct: 120 ---QVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAPLDFEAHPAY 174
Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G + V+I V DIND P F Y ++ E G +V +V ATD+D N + Y
Sbjct: 186 GAHAEVFVDIIVDDINDNPPVFAQQSYAVTLSEASVIGTSVVQVRATDSDSEPNRGISYQ 245
Query: 140 V-----PEDIPFVVDANTGDIRTNKALDYEKQQ 167
+ F VD++TG I + LDYE+ +
Sbjct: 246 MFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSR 278
>gi|410909484|ref|XP_003968220.1| PREDICTED: cadherin-20-like [Takifugu rubripes]
Length = 790
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 86/188 (45%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + ++G +++Q+ ATD D +G V Y +L+ YF++D T
Sbjct: 158 YWATVPEMSQIGTSVIQLTATDADDPTYGNSARVVYSILEGQ----PYFSVDAKTGVLRV 213
Query: 71 -----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
+ IQ + GGL+ T TVNI +TDIND P F Y+ S+PE
Sbjct: 214 SLADMDRETRENYSVVIQAKDMGGQMGGLAGTTTVNITLTDINDNPPMFDQRLYQMSIPE 273
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYSVPE-DIPFVVDANT------GDIRTNKALDYEK 165
G VGR+ A D D G NA + YS+ + D D +T G I K LD+E
Sbjct: 274 AAPMGSVVGRIWAKDRDIGINAEMRYSIIDGDGRDTFDVSTDPTNLFGIITVKKPLDFET 333
Query: 166 QQLYLERV 173
+ Y +V
Sbjct: 334 KPSYTLKV 341
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
+++ DIND P F PY +VPE Q G +V ++ ATDAD+ G +A V YS+ E P
Sbjct: 141 VKIQDINDNEPRFLDGPYWATVPEMSQIGTSVIQLTATDADDPTYGNSARVVYSILEGQP 200
Query: 146 -FVVDANTGDIRTNKA-LDYEKQQLY 169
F VDA TG +R + A +D E ++ Y
Sbjct: 201 YFSVDAKTGVLRVSLADMDRETRENY 226
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 49/109 (44%), Gaps = 13/109 (11%)
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
+DP H GP +D V++ V D+ D+ P F S Y +PE + G V V
Sbjct: 348 VDPLFHHHGPFKD------VTIVHVSVEDV-DEPPLFDSPGYYIELPEDAEIGTVVKTVS 400
Query: 125 ATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D N V YS+ D F +D +G + T + LD E+ +
Sbjct: 401 ARDPDSANN-TVRYSIERTNDLDKYFYIDITSGALMTVRTLDREEMSWH 448
>gi|449482631|ref|XP_004176432.1| PREDICTED: protocadherin-16 [Taeniopygia guttata]
Length = 2905
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 78/161 (48%), Gaps = 24/161 (14%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-----ATEHQ------------ 73
V L ++ATD D G+ G +EYR+ D F+LDP +T H
Sbjct: 1576 VALYTLRATDPDGGENGRLEYRVAGG--DPGQDFSLDPVSGVLSTAHALDREQIASYSLI 1633
Query: 74 GPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
+QD G S+T +V ++V D+ND P F Y VPE G V ++ A D DE
Sbjct: 1634 VVVQDHGSPPRSATMSVTVQVLDLNDNAPSFAQASYTVEVPEDLPVGALVLQLVAEDPDE 1693
Query: 131 GQNA-VVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
G N V YY E + F V+ +G IR+ +ALD E+Q Y
Sbjct: 1694 GTNGQVSYYLGNESLGMFQVEPQSGCIRSAQALDRERQPTY 1734
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVP 141
+ T+TV I +TD ND +P Y F+V E Q G VGRV A+D D GQN+ + Y +
Sbjct: 908 TGTSTVRISITDENDNSPRLSEERYFFTVSENQAPGSTVGRVTASDRDAGQNSRLTYRLL 967
Query: 142 EDIP-FVVDANTGDIRTNKALDYEKQ 166
+ P F++ TG++ T +LD E+Q
Sbjct: 968 QHDPNFLIHTQTGEVSTKHSLDREQQ 993
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 79/175 (45%), Gaps = 22/175 (12%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA------- 69
L Y A + G +++V A DKD G G V YR++ N+ N D
Sbjct: 509 LEYAASISTQSMPGTAVLRVTAHDKDEGLNGRVTYRIVLGNSPPLFSLNKDTGVISLSWS 568
Query: 70 ------TEHQGPI--QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGL 118
T Q I QD GGL + A VNI + + P F+ Y FSVPE G
Sbjct: 569 LSGKANTLVQLVISAQDGGGLQAQPNARVNISIVEGTVSPPVFEQAQYFFSVPEDMPQGA 628
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYL 170
+VG V A + G ++YS+ P F +D+ +G +RT+ LD+E Q + +
Sbjct: 629 SVGSVQAQNP-PGHADDIFYSISSGDPHGYFSIDSASGQLRTSLPLDHESQSVLI 682
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 62/145 (42%), Gaps = 20/145 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA-SYFNLDPATEHQG 74
S FY ++ +G +QV ATD DSG FG + Y + + F++D +
Sbjct: 401 SNFYNVSLKENTPVGTCFLQVTATDSDSGAFGSLSYSIGSGIGSIIPTQFSIDKHSGQLC 460
Query: 75 PIQ------------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQ 115
+Q D GGL+S V + + D ND P F L Y S+ +
Sbjct: 461 TVQPLDRDEGTSAYDFTIIAVDGGGLNSMVYVKVFLEDTNDNRPVFYPLEYAASISTQSM 520
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV 140
G AV RV A D DEG N V Y +
Sbjct: 521 PGTAVLRVTAHDKDEGLNGRVTYRI 545
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 26/162 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI---------- 76
G ++QV A DKD G G V Y +L +S+F +DPAT P+
Sbjct: 308 GSFVLQVTARDKDQGPNGEVRYSILHGRDTHSSWFTIDPATGIITTAAPLDYEKDPQPQL 367
Query: 77 ----QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
D G LSS+A V++ + D+ND P F+S Y S+ E G +V ATD+D
Sbjct: 368 TVLATDRGTPALSSSAVVHVALQDVNDNEPVFKSNFYNVSLKENTPVGTCFLQVTATDSD 427
Query: 130 EGQNAVVYYSVPED------IPFVVDANTGDIRTNKALDYEK 165
G + YS+ F +D ++G + T + LD ++
Sbjct: 428 SGAFGSLSYSIGSGIGSIIPTQFSIDKHSGQLCTVQPLDRDE 469
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVP 141
S+ T+++ + DIND P F Y + E + G ++ +V A+DADEG N V Y +
Sbjct: 56 STQMTLDVSIQDINDNAPSFNQSRYHTLISENLKPGSSILQVFASDADEGDNGDVIYEIN 115
Query: 142 E-----DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +DA TG I+ NK LDYE ++++
Sbjct: 116 RRQSDPDQYFTIDARTGVIKLNKGLDYEVRKVH 148
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 56/107 (52%), Gaps = 6/107 (5%)
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATD 127
AT+H P LS+T +++ V D+ND+ P F+ YE V E G V +V ATD
Sbjct: 1430 ATDHGFP-----RLSATQLLSVLVLDVNDEAPVFEKPEYEAHVMENLPAGSPVLQVLATD 1484
Query: 128 ADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
D G N V Y PF + TG I T +ALD E+Q+ ++ V+
Sbjct: 1485 RDLGANGQVSYGGLSGGPFSIHPQTGLIVTTRALDREEQEQHVLTVY 1531
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 75/173 (43%), Gaps = 27/173 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + G ++QV ATD+D G G V Y L + F++ P T
Sbjct: 1463 YEAHVMENLPAGSPVLQVLATDRDLGANGQVSYGGL-----SGGPFSIHPQTGLIVTTRA 1517
Query: 71 ----EHQGPI----QDEGGLS---STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
E + + + GL + ATV + V D ND P +S + VPE Q +A
Sbjct: 1518 LDREEQEQHVLTVYARDAGLPPSLTKATVWVTVGDENDHAPHLESESFSVEVPENQSRVA 1577
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ + ATD D G+N + Y V P F +D +G + T ALD E+ Y
Sbjct: 1578 LYTLRATDPDGGENGRLEYRVAGGDPGQDFSLDPVSGVLSTAHALDREQIASY 1630
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 65/142 (45%), Gaps = 18/142 (12%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA-------------SY 63
+FY + + G ++ V ATD DSG G + + L + D A
Sbjct: 2163 VFYQVLLPEHTPAGTVILTVSATDPDSGSNGDITFHLAVPSPDVAIDPSNGTLFTTRQVE 2222
Query: 64 FNLD-PATEHQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
FN P + +D G LSS ATV ++V D+ND +P FQ Y SVPE + G
Sbjct: 2223 FNASQPTLDLVVEARDHGSPSLSSWATVQLQVLDVNDHSPLFQEPCYNASVPEDLRPGTT 2282
Query: 120 VGRVHATDAD-EGQNAVVYYSV 140
V + A DAD +NA Y++
Sbjct: 2283 VLMLEAGDADLSRENAGFDYTI 2304
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 71/181 (39%), Gaps = 32/181 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG---P 75
Y A+ + G L++V A D DSG G V Y + ++ D F L +T P
Sbjct: 2385 YRAVVSEAALPGTELLRVAAHDADSGPRGRVHYTI--SSGDQHGLFQLHESTGALSLVRP 2442
Query: 76 IQDE---------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
+ E GG + V I V DIND P F S+ E G
Sbjct: 2443 LDREAQALHTLVVQATDTPGGHFALVPVAIEVKDINDNKPYFPVEMLSASIRENLPPGTL 2502
Query: 120 VGRVHATDADEGQNAVVYYSVPEDI-----------PFVVDANTGDIRTNKALDYEKQQL 168
V + A DAD G + Y V E F V+ ++G++R+ DYE+ +
Sbjct: 2503 VTTLRAVDADTGAFGELRYVVLEQAVGDPSTGDGRDAFAVNGSSGELRSRLTFDYERAKA 2562
Query: 169 Y 169
+
Sbjct: 2563 F 2563
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV-----PED 143
++V D+ND P F Y+ S+PE G V +V A D D+G N V YS+
Sbjct: 280 LQVMDVNDNPPLFDQQEYKQSIPEVVYPGSFVLQVTARDKDQGPNGEVRYSILHGRDTHS 339
Query: 144 IPFVVDANTGDIRTNKALDYEK 165
F +D TG I T LDYEK
Sbjct: 340 SWFTIDPATGIITTAAPLDYEK 361
Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE-GQNAVVYYSV----P 141
V I V D ND+ P F P VPE Q G ++ A D D G N+ V Y++ P
Sbjct: 1200 VQIHVQDCNDQAPTFPEDPITIVVPENAQAGSSIFTFQALDGDGVGPNSQVRYALLHLEP 1259
Query: 142 EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
PF +D +G + + LD E +L
Sbjct: 1260 PGAPFQLDGRSGQLSLRQGLDREATASFL 1288
Score = 42.7 bits (99), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 14/128 (10%)
Query: 44 GKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIR--VTDINDKNPE 101
G G + Y ++ N + F + P++ +QD L A+ +R + D+ND P
Sbjct: 1901 GSSGHITYSIVSGN--ERNTFLIQPSS-----VQDSSSLDFEASPQLRLVIQDVNDNLPR 1953
Query: 102 FQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP----FVVDANTGDIR 156
FQ Y + E Q V +V A D D+G N V Y++ + +P + +D TG I
Sbjct: 1954 FQLQNYVAFIWESQSYDSPVIQVLADDLDQGVNGQVTYAINQSLPMPGLYHIDPQTGTIT 2013
Query: 157 TNKALDYE 164
T LD E
Sbjct: 2014 TAAILDRE 2021
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 8/115 (6%)
Query: 59 DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DG 117
+A +NL A +G Q S+T V I V D+ND P F Y V E G
Sbjct: 2341 EAIPVYNLTVAASDRGLPQR----SATVPVLITVQDVNDNPPVFSRAEYRAVVSEAALPG 2396
Query: 118 LAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ RV A DAD G V+Y++ + F + +TG + + LD E Q L+
Sbjct: 2397 TELLRVAAHDADSGPRGRVHYTISSGDQHGLFQLHESTGALSLVRPLDREAQALH 2451
Score = 39.3 bits (90), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 26/134 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNT---------DAASYFNLDPATEHQGPIQ--- 77
G T+ +V A+D+D+G+ + YRLL ++ + ++ +LD E Q Q
Sbjct: 943 GSTVGRVTASDRDAGQNSRLTYRLLQHDPNFLIHTQTGEVSTKHSLD--REQQSNFQLLV 1000
Query: 78 --DEGGL---SSTATVNIRVTDINDKNPEF------QSLPYEFSVPEGQDGLAVGRVHAT 126
+GG S+T T+ + V D ND P F Q L + + E G +
Sbjct: 1001 IVQDGGAPPRSATGTIYVTVLDENDNAPAFLHVGSGQELTVQ-GLEEKPSGFWSPSLQDN 1059
Query: 127 DADEGQNAVVYYSV 140
D DEG+N + YS+
Sbjct: 1060 DPDEGENGTIIYSL 1073
Score = 38.9 bits (89), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE 142
S V I V+D+ND P F + +PE + G V + A D D G N V + +
Sbjct: 696 SNTRVKISVSDVNDNMPAFPTPSDSILLPEATEPGTTVYTLQAEDRDSGANGQVTFELLS 755
Query: 143 --DIPFVVDANTGDIRTNKALDYEKQQLY 169
+ F+V+ +G +R AL YE Y
Sbjct: 756 GGEGTFIVERASGAVRLLGALQYEAISAY 784
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 75/188 (39%), Gaps = 32/188 (17%)
Query: 4 CPIPSALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY 63
P+P + + ++L LG + Q+ D DSG + Y LL D A
Sbjct: 2060 IPVPWEIRVPENTL-----------LGTQIAQLTGNDVDSGP--ALSYTLLLEG-DMADT 2105
Query: 64 FNLDPATEH---QGPIQDEGGLSST-------------ATVNIRVTDINDKNPEFQSLPY 107
F + H GP+ E T A + + V D+ND P F + Y
Sbjct: 2106 FGVLRYGGHIALTGPLDHEQRSRYTLTLRASDTRHETEANLTVLVEDVNDNVPTFTQVFY 2165
Query: 108 EFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
+ +PE G + V ATD D G N + + + P V +D + G + T + +++
Sbjct: 2166 QVLLPEHTPAGTVILTVSATDPDSGSNGDITFHLAVPSPDVAIDPSNGTLFTTRQVEFNA 2225
Query: 166 QQLYLERV 173
Q L+ V
Sbjct: 2226 SQPTLDLV 2233
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 67/169 (39%), Gaps = 25/169 (14%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEG------- 80
E G T+ ++A D+DSG G V + LL A G +Q E
Sbjct: 728 EPGTTVYTLQAEDRDSGANGQVTFELLSGGEGTFIVERASGAVRLLGALQYEAISAYSLA 787
Query: 81 ---------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVG----RVHATD 127
LSST T+ + V +D P F +L Y V Q+G+ V +V A
Sbjct: 788 IVARDSGIPQLSSTFTLLVHVQAEDDNGPIFDTLTYRVEV---QEGVPVSTRFLQVRALA 844
Query: 128 ADEGQNAVVYY--SVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
D A+ Y+ + + F + +G + ALD E + LY+ V
Sbjct: 845 HDVESTALTYHLRADGDAASFGIVPESGWLYVKSALDRETRDLYVLTVL 893
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 56/141 (39%), Gaps = 30/141 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y + + + G +++QV A+D D G G V Y + +D YF +D T G I+
Sbjct: 80 YHTLISENLKPGSSILQVFASDADEGDNGDVIYEINRRQSDPDQYFTIDART---GVIKL 136
Query: 79 EGGLS----------------------STATVNIRVTDINDKNPE----FQSLPYEFSVP 112
GL +TA V I V D ND P F S +
Sbjct: 137 NKGLDYEVRKVHELVVQARDKAVHPEVTTAFVTIHVRDYNDNQPTMTIIFLSEDGSPQIS 196
Query: 113 EG-QDGLAVGRVHATDADEGQ 132
EG Q G V R+ +D D G+
Sbjct: 197 EGAQPGQYVARISVSDPDYGE 217
>gi|16553903|dbj|BAB71613.1| unnamed protein product [Homo sapiens]
gi|119586593|gb|EAW66189.1| cadherin-like 24, isoform CRA_a [Homo sapiens]
Length = 493
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 84/185 (45%), Gaps = 31/185 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV A D D +G +L+ D +F++DP T
Sbjct: 155 YHATVPEMSNVGTSVIQVTAHDADDPSYG-NSAKLVYTVLDGLPFFSVDPQTGVVRTAIP 213
Query: 71 --------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E IQ + GGLS + TV + ++D+ND P+F Y+FSV E
Sbjct: 214 NMDRETQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAG 273
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQL 168
G VGR+ A D D G NA++ YS+ + I + G + K LD+E Q+
Sbjct: 274 PGTLVGRLRAQDPDLGDNALMAYSILDGEGSEAFSISTDLQGRDGLLTVRKPLDFESQRS 333
Query: 169 YLERV 173
Y RV
Sbjct: 334 YSFRV 338
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 63/127 (49%), Gaps = 22/127 (17%)
Query: 50 EYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF 109
+Y LL D AS L+P +E I+V DIND P F PY
Sbjct: 114 QYVLLAQAVDRASNRPLEPPSE----------------FIIKVQDINDNPPIFPLGPYHA 157
Query: 110 SVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIPFV-VDANTGDIRTN-KALDY 163
+VPE + G +V +V A DAD+ G +A + Y+V + +PF VD TG +RT +D
Sbjct: 158 TVPEMSNVGTSVIQVTAHDADDPSYGNSAKLVYTVLDGLPFFSVDPQTGVVRTAIPNMDR 217
Query: 164 EKQQLYL 170
E Q+ +L
Sbjct: 218 ETQEEFL 224
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 11/108 (10%)
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVH 124
+DPA +GP +D A+V + V D + P F Y +VPE + G VG++
Sbjct: 345 IDPAYLRRGPFKD------VASVRVAVQDAPEP-PAFTQAAYHLTVPENKAPGTLVGQIS 397
Query: 125 ATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
A D D + + Y +P P F + G I T LD E + +
Sbjct: 398 AADLDSPASPIRYSILPHSDPERCFSIQPEEGTIHTAAPLDREARAWH 445
>gi|149055476|gb|EDM07060.1| protocadherin 11 X-linked (predicted) [Rattus norvegicus]
Length = 1018
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 79/174 (45%), Gaps = 26/174 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
F + + G L ++ ATD DSG+ + Y L DA FNLD T
Sbjct: 470 FISLSVPENNSPGAQLTKISATDADSGRNAEINYLL---GFDAPPEFNLDRRTGILTAVK 526
Query: 71 ----EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--QD 116
E Q QD G L S ATV + V D ND +P F Y F VPE +
Sbjct: 527 KLDREKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEYNFYVPENLPKH 586
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLY 169
G VG + TD D G+N+ V SV + + F +D +G IR N + D EKQ+ Y
Sbjct: 587 G-TVGLITVTDPDYGENSAVTLSVLDVNDQFTIDPQSGVIRPNISFDREKQESY 639
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+ ++ + I+V D ND P F SVPE G + ++ ATDAD G+NA + Y +
Sbjct: 446 LNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNSPGAQLTKISATDADSGRNAEINYLL 505
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
D P F +D TG + K LD EKQ+ Y
Sbjct: 506 GFDAPPEFNLDRRTGILTAVKKLDREKQEKY 536
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 78 DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
++GG SSTA + + V D ND P F E S+PE G +V ++HATDAD G+N
Sbjct: 222 EDGGFPQRSSTAILQVSVADTNDNRPIFIEKEIEVSIPENAPIGSSVTQLHATDADIGEN 281
Query: 134 AVVYYSVPEDIP------FVVDANTGDIRTNKALDYEK 165
A +++ + F ++ TG I + LD E+
Sbjct: 282 ARIHFYFSNLVSNNAKRLFHLNTTTGLITVKEPLDREE 319
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 60/146 (41%), Gaps = 30/146 (20%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP-- 75
FY KH T+ + TD D G+ V +LD N F +DP + P
Sbjct: 577 FYVPENLPKHG---TVGLITVTDPDYGENSAVTLSVLDVN----DQFTIDPQSGVIRPNI 629
Query: 76 -------------IQDEGG----LSSTATVNIRVTDINDKNPEFQSLP----YEFSVPEG 114
++ E G SSTA V I V D+ND P F P +E+ +P
Sbjct: 630 SFDREKQESYTFYVKAEDGGRVSRSSTAKVTINVVDVNDNKPIFIDPPSNYSFEWVLPST 689
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV 140
G + +V A D D G NA + YS+
Sbjct: 690 DPGTVIFKVLAIDNDTGMNAELRYSI 715
>gi|347543899|gb|AEP02522.1| CDH23, partial [Miniopterus schreibersii]
Length = 3274
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 78/160 (48%), Gaps = 27/160 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD------------PATEHQG--- 74
G ++QV+ATD+D G ++ Y + + N D F +D P E Q
Sbjct: 1534 GTAVVQVRATDRDIGINSVLSYYITEGNDDVT--FRMDRISGEISTRPAPPDRERQSFYH 1591
Query: 75 ---PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATD 127
++DEG LS+T V + + D ND P FQ YE + EG D + ++ V A D
Sbjct: 1592 LVVTVEDEGTPPLSATTHVYVTIVDENDNAPAFQQPHYEILLDEGPDTVNASLVTVQAQD 1651
Query: 128 ADEGQNAVVYYS-VPEDI--PFVVDANTGDIRTNKALDYE 164
DEG N V Y+ + +I F +D +TG IR K LDYE
Sbjct: 1652 PDEGPNGTVTYAIIAGNIIDTFRIDRHTGVIRAAKELDYE 1691
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 22/166 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G +++Q+ ATD D G+FGLV YR+L+ N + ++ +GP
Sbjct: 1108 GHSIVQLMATDADEGEFGLVWYRILNGNDGKNFHIHVSDGLLMRGPKPLDREQASSHVLI 1167
Query: 77 -----QDEGGLSSTATVNIRVTDINDKNPEFQSLPY-EFSVPEGQD-GLAVGRVHATDAD 129
D G + S+ V + V D+ND+ P F Y ++ E G +V V ATD D
Sbjct: 1168 VEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYSRLALRETAGIGTSVIVVKATDRD 1227
Query: 130 EGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
G +V Y + + F +D +TG I T LDYE + YL V
Sbjct: 1228 TGDGGLVSYRILSGAEGKFEIDESTGLIITVDYLDYETKTSYLMNV 1273
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
+S+ATV + + D+ND +P FQ+LP+ V EG G++V +V A D DEG N +V Y +
Sbjct: 861 TSSATVFVNLLDLNDNDPIFQNLPFVAEVLEGTPAGVSVYQVVAIDLDEGLNGLVSYRMQ 920
Query: 142 EDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
+P FV++++TG + T LD E+ Y RV
Sbjct: 921 VGMPRMDFVINSSTGVVVTTTELDRERIAQYQLRV 955
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 33/168 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------------ 70
+G ++ V ATD DSG F ++EY L+ D F ++P T
Sbjct: 2407 VGTVILTVTATDADSGNFAVIEYGLV----DGEGKFAINPTTGDIYVLSSLDREKKDHYI 2462
Query: 71 ------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRV 123
++ G I +S V I+V D+ND P+F Y SV E + G +V +
Sbjct: 2463 LTALAKDNPGDIASNRRENSVQVV-IQVLDVNDCRPQFSKSQYSTSVYENEPAGTSVITM 2521
Query: 124 HATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKAL-DYEKQQL 168
ATD DEG N + YS+ P + F VD ++G + T + L YE+ L
Sbjct: 2522 MATDQDEGSNGELTYSLEGPGEEAFHVDLDSGLVTTKRPLHSYERFNL 2569
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 31/155 (20%)
Query: 38 ATDKDSGKFGLVEYRLLDNN-----------------------TDAASYFNLDPATEHQG 74
A D+DSG G VEY ++D + + +++NL +G
Sbjct: 1758 AYDRDSGPNGQVEYSIVDGDPLGEFLISPVEGVLRVRKDVELDRETIAFYNLTICARDRG 1817
Query: 75 PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQN 133
LSST V IRV DIND +P +LP ++ E + V + A+DAD G N
Sbjct: 1818 ----VPPLSSTMLVGIRVLDINDNDPVLLNLPMNVTISENSPVSSFVAHILASDADSGCN 1873
Query: 134 AVVYYSVP---EDIPFVVDANTGDIRTNKALDYEK 165
A++ +++ + F ++A +G + N+ LD E+
Sbjct: 1874 ALLTFNITAGNRERAFSINATSGVVTVNRPLDRER 1908
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 73/164 (44%), Gaps = 22/164 (13%)
Query: 9 ALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD- 67
A +M +D L +G + A + D+G L + LD T S F ++
Sbjct: 49 ARDMDNDPLVFGVSGEEASRF-------FAVEPDTGVVWL--RQPLDRET--KSEFTVEF 97
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
++HQG I T VNI+V D+ND P F + PY +PE G + V+AT
Sbjct: 98 SVSDHQGVI--------TRKVNIQVGDVNDNAPTFHNQPYSVRIPEDTPVGTPIFIVNAT 149
Query: 127 DADEGQNAVVYYSV-PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D D G V YS P F +D+ G + + LDYE Q Y
Sbjct: 150 DPDLGAGGSVLYSFQPPSQFFAIDSARGIVTVIQELDYETTQAY 193
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 73/166 (43%), Gaps = 30/166 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLD-------------------NNT---DAASYFNLD 67
G TL+ V A D D G GL+ Y LLD N T + + N
Sbjct: 2302 GTTLIAVAAVDPDKGLNGLITYSLLDLMPPGYVQLEDSSAGKVIANRTVDYEEVHWLNFT 2361
Query: 68 -PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHA 125
A ++ P + ++ V + + DIND NP F Y+ +V E G + V A
Sbjct: 2362 VRAADNGSPPR-----AAEIPVYLEIVDINDNNPIFDEPSYQEAVFEDAPVGTVILTVTA 2416
Query: 126 TDADEGQNAVVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
TDAD G AV+ Y V + F ++ TGDI +LD EK+ Y+
Sbjct: 2417 TDADSGNFAVIEYGLVDGEGKFAINPTTGDIYVLSSLDREKKDHYI 2462
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 54 LDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
LD T AA L+ GP+ + TATV + V D+ND P F YE SVPE
Sbjct: 1048 LDRETTAAYTLVLEAI--DNGPVGKRR--TGTATVFVTVLDVNDNRPIFLQSSYEASVPE 1103
Query: 114 G-QDGLAVGRVHATDADEGQNAVVYYSV 140
+G ++ ++ ATDADEG+ +V+Y +
Sbjct: 1104 DIPEGHSIVQLMATDADEGEFGLVWYRI 1131
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 77/178 (43%), Gaps = 31/178 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA-TEHQGPIQ 77
Y + G +++ + ATD+D G G + Y L + + A + +LD + P+
Sbjct: 2504 YSTSVYENEPAGTSVITMMATDQDEGSNGELTYSL-EGPGEEAFHVDLDSGLVTTKRPLH 2562
Query: 78 D-----------EGG---LSSTATVNIRVTDINDKNPEFQSLP------YEFSVPEGQDG 117
+GG L T + + V D+ND P F P + +P +
Sbjct: 2563 SYERFNLTVVATDGGEPPLWGTTMLLVEVIDVNDNRPVFVRPPNGTILHIKEEIPLRSN- 2621
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
V V+ATD DEG N V YS + F +DA +G I+T + LD EKQ LY
Sbjct: 2622 --VYEVYATDQDEGLNGAVRYSFLKTTGNRDWEYFTIDAVSGLIQTAQRLDREKQALY 2677
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 70/169 (41%), Gaps = 33/169 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------------ 70
+ +L+ V+A D D G G V Y ++ N F +D T
Sbjct: 1640 VNASLVTVQAQDPDEGPNGTVTYAIIAGNI--IDTFRIDRHTGVIRAAKELDYEISHGRY 1697
Query: 71 ------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYE--FSVPEGQDGLAVGR 122
Q PI L+ST TV + V DIND P F YE F V EGQ G V
Sbjct: 1698 TLIVTATDQCPILSRR-LTSTTTVLVNVNDINDNVPTFPR-DYEGPFDVTEGQPGPRVWT 1755
Query: 123 VHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
A D D G N V YS+ + P F++ G +R K ++ +++ +
Sbjct: 1756 FLAYDRDSGPNGQVEYSIVDGDPLGEFLISPVEGVLRVRKDVELDRETI 1804
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 31/181 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD---------- 67
+ GA+ R+ L++++ATD+DS + Y ++ N + SYF++
Sbjct: 556 YVGAL-RENEPSVTQLVRLRATDEDSPPNNQITYSIV-NASCFGSYFDISVYEGYAVISV 613
Query: 68 --PATEHQGP---------IQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
P Q P +D G L+ST V I V D ND P F Y SV E
Sbjct: 614 SRPLDYEQIPNGLIYLTVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVES 673
Query: 115 -QDGLAVGRVHATDADE----GQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G V ++ATD D+ GQ +++ YS+ F + A +G+I T LD E + Y
Sbjct: 674 IMAGATVLFLNATDLDQSREYGQESII-YSLEGSSQFRIGARSGEITTTSLLDRETKSEY 732
Query: 170 L 170
+
Sbjct: 733 I 733
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 59/141 (41%), Gaps = 22/141 (15%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI- 76
Y + +G +++ V ATD D G FG V Y +D F+LD T I
Sbjct: 454 LYNVSLYENVTVGTSVLTVLATDNDVGTFGEVNYFF----SDDPDRFSLDKDTGLIMLIA 509
Query: 77 ----------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA- 119
+D GG +T V I V D+ND P FQ Y ++ E + +
Sbjct: 510 KLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQ 569
Query: 120 VGRVHATDADEGQNAVVYYSV 140
+ R+ ATD D N + YS+
Sbjct: 570 LVRLRATDEDSPPNNQITYSI 590
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 72/174 (41%), Gaps = 34/174 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------ASYFNLDPATEHQGPIQDEGGL 82
G T+ + A D+D G+ + Y ++ NT++ + L+ + + P+ G +
Sbjct: 244 GTTVRVITAIDQDKGRPRGIGYTIVSGNTNSIFALDYISGALTLNGLLDRENPLYSHGFI 303
Query: 83 -----------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGR-V 123
+ T T NI V DIND PEF S Y ++ E Q G A+ +
Sbjct: 304 LTVKGTELNDDRTPSDATVTTTFNILVIDINDNAPEFNSSEYSVAITELAQVGFALPLFI 363
Query: 124 HATDADEGQNAV--VYYSVPEDIPFVVDANT----GDIRTNKA--LDYEKQQLY 169
D DEG N++ VY F++ + DIR A LDYE Y
Sbjct: 364 QVVDRDEGLNSMFEVYLVGNNSHHFIISPTSVQGKADIRIRVAIPLDYETVDRY 417
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 70/166 (42%), Gaps = 31/166 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDA------------ASYFNLD 67
GV++ QV A D D G GLV YR+ ++++T A Y
Sbjct: 896 GVSVYQVVAIDLDEGLNGLVSYRMQVGMPRMDFVINSSTGVVVTTTELDRERIAQYQLRV 955
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHAT 126
AT+ P + SST+T+ IRV D+ND+ P F Y SV E V ++ T
Sbjct: 956 VATDAGTPTK-----SSTSTLTIRVLDVNDETPTFFPAVYNVSVSEDVPRDFRVVWLNCT 1010
Query: 127 DADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D D G NA + Y + D F V +RT LD E Y
Sbjct: 1011 DNDVGLNAELSYFITGGNVDGKFSVGYRDAVVRTVVNLDRETTAAY 1056
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 10/85 (11%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPY-----EFSVPEGQDGLAVGRVHATDADEGQNAVVY 137
+ ATVNI + DIND +P ++ PY E + P+ V V A D D G+N +
Sbjct: 749 TGIATVNITLLDINDNHPTWKDAPYYINLVEMTPPDSD----VTTVVAVDPDLGENGTLV 804
Query: 138 YSV-PEDIPFVVDANTGDIRTNKAL 161
YS+ P + + ++++TG IRT +
Sbjct: 805 YSIQPPNKFYSINSSTGKIRTTHVM 829
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 32/170 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI----------QD 78
+G + VKA D D+G G V + L N A F + + G + D
Sbjct: 1424 VGQRVATVKARDPDAGSNGQVVFSLASGNIAGA--FEIVTTNDSIGEVFVARPLDREELD 1481
Query: 79 EGGLSSTAT------------VNIRVTDINDKNPEFQSLPYEFSVPEGQD---GLAVGRV 123
L A+ + + + D+ND P +S P+ ++V ++ G AV +V
Sbjct: 1482 HYILKVVASDRGTPPRKKDHILQVTILDVNDNPPVIES-PFGYNVSVNENVGGGTAVVQV 1540
Query: 124 HATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKA-LDYEKQQLY 169
ATD D G N+V+ Y + E D+ F +D +G+I T A D E+Q Y
Sbjct: 1541 RATDRDIGINSVLSYYITEGNDDVTFRMDRISGEISTRPAPPDRERQSFY 1590
Score = 42.4 bits (98), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 74/180 (41%), Gaps = 36/180 (20%)
Query: 19 YGAMA-RDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y +A R+ +G +++ VKATD+D+G GLV YR+L + A F +D +T
Sbjct: 1203 YSRLALRETAGIGTSVIVVKATDRDTGDGGLVSYRIL---SGAEGKFEIDESTGLIITVD 1259
Query: 71 ----------------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
Q P ++G S V I + + D++ +F + YE ++ E
Sbjct: 1260 YLDYETKTSYLMNVSATDQAPPFNQGFCS----VYITLLNELDEDVQFSNASYEAAIMEN 1315
Query: 115 QD-GLAVGRVHATDADEGQNAV----VYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + RV A D Y S F +DA TG I +D EK Y
Sbjct: 1316 LALGTEIVRVQAYSIDNINQITYRFDAYTSAQAKALFKIDAYTGVITVKGLVDREKGDFY 1375
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 72/173 (41%), Gaps = 36/173 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------EHQGPIQ 77
G +++QV ATD+DSG G + YR+ A F + P T E Q +
Sbjct: 2075 GFSVLQVTATDEDSGLNGELVYRI---EAGAQDRFLIHPVTGVIRVGNVTIDREEQESYR 2131
Query: 78 ------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDA 128
D G LS TA + I + D+ND PEF + SV E + G + V A D
Sbjct: 2132 LTVVASDRGTVPLSGTAIITILIDDVNDCRPEFLNPIQTVSVLESAEPGTVIANVTAIDR 2191
Query: 129 D---EGQNAVVYYSVPED----IP-----FVVDANTGDIRTNKALDYEKQQLY 169
D + + ++ +D +P F V+ NTG + L+ E Y
Sbjct: 2192 DLNPKLEYHIISIVAKDDTDRLVPDQEDAFAVNVNTGSVMVKSPLNRELVATY 2244
Score = 39.3 bits (90), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 78/187 (41%), Gaps = 41/187 (21%)
Query: 20 GAMARDKHELGV--TLMQVKATDKDSGKFGLVEYRLLDNNTDA-ASYFNLDPATEHQGPI 76
G + K E+ + + +V ATD+D G G V Y L + YF +D + G I
Sbjct: 2607 GTILHIKEEIPLRSNVYEVYATDQDEGLNGAVRYSFLKTTGNRDWEYFTIDAVS---GLI 2663
Query: 77 QDEGGL-----------------------SSTATVNIRVTDINDKNPEFQSLP-----YE 108
Q L + + + + DI+D P F P Y+
Sbjct: 2664 QTAQRLDREKQALYSLILVASDLGQPVPYETMQPLQVVLDDIDDNEPLFLRPPKGSPQYQ 2723
Query: 109 F-SVPE-GQDGLAVGRVH-ATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALD 162
+VPE G VG V A DADEG NA+VYY + E+ F + + G + K LD
Sbjct: 2724 LLTVPEHSPRGTLVGNVTGAVDADEGSNAIVYYFIAAGNEEKNFHLQPD-GRLLVLKDLD 2782
Query: 163 YEKQQLY 169
E++ L+
Sbjct: 2783 REREALF 2789
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 86 ATVNIRVTDINDKNPEFQSLP---YEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
A + + + D+ND P F+ Y V EG G + V A D D+G N ++ YS+
Sbjct: 2267 AKLTVNILDVNDNTPRFKPFGITYYTEKVLEGATPGTTLIAVAAVDPDKGLNGLITYSLL 2326
Query: 142 EDIP----FVVDANTGDIRTNKALDYEK 165
+ +P + D++ G + N+ +DYE+
Sbjct: 2327 DLMPPGYVQLEDSSAGKVIANRTVDYEE 2354
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAV 135
+D G L+ TA + + + D ND P F + E G +V +V ATD D G N
Sbjct: 2034 EDIGLLNGTADLIVTILDDNDNWPTFSPAALTIHLLENCPPGFSVLQVTATDEDSGLNGE 2093
Query: 136 VYYSVPEDIP--FVVDANTGDIRT-NKALDYEKQQLY 169
+ Y + F++ TG IR N +D E+Q+ Y
Sbjct: 2094 LVYRIEAGAQDRFLIHPVTGVIRVGNVTIDREEQESY 2130
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 66/161 (40%), Gaps = 28/161 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G + V ATD D G G V Y + +F +D A IQ+
Sbjct: 139 VGTPIFIVNATDPDLGAGGSVLYSF----QPPSQFFAIDSARGIVTVIQELDYETTQAYQ 194
Query: 79 ----------EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
LS+ A + I +TD+ D +P F +LPY ++ E G V + A D
Sbjct: 195 LTVNATDQDKTRPLSTLANLAIIITDVQDMDPIFINLPYSTNIYEHSPPGTTVRVITAID 254
Query: 128 ADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEK 165
D+G+ + Y++ + F +D +G + N LD E
Sbjct: 255 QDKGRPRGIGYTIVSGNTNSIFALDYISGALTLNGLLDREN 295
>gi|347543913|gb|AEP02529.1| CDH23, partial [Taphozous melanopogon]
Length = 3205
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 78/160 (48%), Gaps = 27/160 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD------------PATEHQG--- 74
G ++QV+ATD+D G L+ Y + + N D F +D P E Q
Sbjct: 1534 GTAIVQVRATDRDIGINSLLSYYITEGNEDMT--FRMDRTSGEIATRPAPPDRERQSFYH 1591
Query: 75 ---PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVHATD 127
++DEG LS+T V + + D ND P FQ YE + EG D + ++ + A D
Sbjct: 1592 LVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQRPHYEIFLDEGPDTVNASLITIQALD 1651
Query: 128 ADEGQNAVVYYS-VPEDI--PFVVDANTGDIRTNKALDYE 164
DEG N V Y+ + +I F +D +TG IR K LDYE
Sbjct: 1652 LDEGPNGTVTYAIIAGNIINTFHIDRHTGVIRAAKELDYE 1691
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 75/166 (45%), Gaps = 22/166 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G +++Q+KATD D G+FG V YR+L N ++ +GP
Sbjct: 1108 GHSIVQLKATDADEGEFGRVWYRILHGNHGNNFRIHISDGLLMRGPKPLDREQDSSHVLI 1167
Query: 77 -----QDEGGLSSTATVNIRVTDINDKNPEFQSLPY-EFSVPEGQD-GLAVGRVHATDAD 129
D G + S+ V + V D+ND+ P F Y ++ E G +V V ATD D
Sbjct: 1168 VEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYSRLALRETAGIGTSVIVVKATDRD 1227
Query: 130 EGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
G +V Y + + F +D +TG I T LDYE + YL V
Sbjct: 1228 TGDGGLVNYCILSGAEGKFEIDESTGLIITVDYLDYETKTSYLMNV 1273
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 77/166 (46%), Gaps = 30/166 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLD-------------------NNT---DAASYFNLD 67
G TL+ V A D D G GL+ Y LLD N T + + N
Sbjct: 2302 GTTLIAVAAVDPDKGLNGLITYTLLDLVPPGYVQLEDSSAGKVIANRTVDYEEVHWLNFT 2361
Query: 68 -PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHA 125
A+++ P + ++ V + + DIND NP F Y+ ++ E G + RV A
Sbjct: 2362 VRASDNGSPPR-----AAEIPVYLEIVDINDNNPIFDQPSYQEAISEDVPVGTVILRVTA 2416
Query: 126 TDADEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYL 170
TDAD G A++ YS+ + + F ++ TGDI +LD EK+ Y+
Sbjct: 2417 TDADSGNFALIEYSLGDGEGKFAINPTTGDIYVLSSLDREKKDHYI 2462
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
+S+ATV + + D+ND +P FQ+LP+ V EG G++V +V A D DEG N +V Y +
Sbjct: 861 TSSATVFVNLLDLNDNDPIFQNLPFVAEVLEGTPAGVSVYQVVAVDLDEGLNGLVSYRMQ 920
Query: 142 EDIP---FVVDANTGDIRTNKALDYEKQQLYLERV 173
+P F+++ ++G + T LD E+ Y RV
Sbjct: 921 VGMPRMDFLINGSSGVVVTTTELDRERITEYQLRV 955
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 33/168 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------------ 70
+G +++V ATD DSG F L+EY L D F ++P T
Sbjct: 2407 VGTVILRVTATDADSGNFALIEYSL----GDGEGKFAINPTTGDIYVLSSLDREKKDHYI 2462
Query: 71 ------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRV 123
++ G + +S V I+V D+ND P+F + SV E + G +V +
Sbjct: 2463 LTALAKDNPGDVASNRRENSVQVV-IQVLDVNDCRPQFSKPQFSTSVYENEPAGTSVITM 2521
Query: 124 HATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKAL-DYEKQQL 168
ATD DEG N V YS+ P + F VD ++G + T + L YE+ L
Sbjct: 2522 VATDQDEGSNGEVTYSLEGPGEEAFHVDMDSGLVTTKRPLHSYERFNL 2569
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 31/155 (20%)
Query: 38 ATDKDSGKFGLVEYRLLDNN-----------------------TDAASYFNLDPATEHQG 74
A D+DSG G VEY ++D + + +++NL +G
Sbjct: 1758 AHDRDSGPNGQVEYSIVDGDPLGEFLISPVEGVLRVRKDMELDRETVAFYNLTICARDRG 1817
Query: 75 PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQN 133
LSST V IRV DIND +P +LP ++ E + V + A+DAD G N
Sbjct: 1818 ----VPPLSSTMLVGIRVLDINDNDPVLLNLPMNVTISENSPISSFVAHILASDADSGCN 1873
Query: 134 AVVYYSVP---EDIPFVVDANTGDIRTNKALDYEK 165
A++ +++ + F ++A TG + N+ LD E+
Sbjct: 1874 ALLTFNITAGNRERAFSINATTGIVTVNQPLDRER 1908
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 73/164 (44%), Gaps = 22/164 (13%)
Query: 9 ALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD- 67
A +M +D L +G + A + D+G L + LD T S F ++
Sbjct: 49 ARDMDNDPLVFGVSGEEASRF-------FAVEPDTGVVWL--RQPLDRET--KSEFTVEF 97
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
++HQG I T VNI+V D+ND P F + PY +PE G + V+AT
Sbjct: 98 SVSDHQGVI--------TRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNAT 149
Query: 127 DADEGQNAVVYYSV-PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D D G V YS P F +D+ G I + LDYE Q Y
Sbjct: 150 DPDLGAGGSVLYSFQPPSQFFAIDSARGIITVIQELDYETTQAY 193
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 54 LDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
LD T AA L+ GP+ + TATV + V D+ND P F YE SVPE
Sbjct: 1048 LDRETTAAYTLVLEAI--DNGPVGKRR--TGTATVFVTVLDVNDNRPIFMQSSYEASVPE 1103
Query: 114 G-QDGLAVGRVHATDADEGQNAVVYYSV 140
+G ++ ++ ATDADEG+ V+Y +
Sbjct: 1104 DIPEGHSIVQLKATDADEGEFGRVWYRI 1131
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 71/161 (44%), Gaps = 21/161 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAA----SYFNLDPATEHQGPI 76
GV++ QV A D D G GLV YR+ L N + + + + TE+Q +
Sbjct: 896 GVSVYQVVAVDLDEGLNGLVSYRMQVGMPRMDFLINGSSGVVVTTTELDRERITEYQLRV 955
Query: 77 --QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEG 131
D G SST+T+ IRV D+ND+ P F Y SV E V ++ TD D G
Sbjct: 956 VATDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVSVSEDVPRDFRVVWLNCTDNDVG 1015
Query: 132 QNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
NA + Y + D F + +RT LD E Y
Sbjct: 1016 LNAELSYFITGGNVDGKFSIGYRDAVVRTVVGLDRETTAAY 1056
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 71/167 (42%), Gaps = 29/167 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LDPATEH----- 72
+ +L+ ++A D D G G V Y ++ N + + LD H
Sbjct: 1640 VNASLITIQALDLDEGPNGTVTYAIIAGNIINTFHIDRHTGVIRAAKELDYEISHGRYTL 1699
Query: 73 ------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYE--FSVPEGQDGLAVGRVH 124
Q PI L+S+ TV + V DIND P F YE F V EGQ G V
Sbjct: 1700 IVTATDQCPILSRR-LTSSTTVLVNVHDINDNVPTFPR-DYEGPFDVTEGQPGPRVWTFL 1757
Query: 125 ATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
A D D G N V YS+ + P F++ G +R K ++ +++ +
Sbjct: 1758 AHDRDSGPNGQVEYSIVDGDPLGEFLISPVEGVLRVRKDMELDRETV 1804
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 31/181 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD---------- 67
+ GA+ R+ L++++ATD+DS + Y ++ N + SYF++
Sbjct: 556 YVGAL-RENEPSVTQLVRLRATDEDSPPNNQITYSIV-NASAFGSYFDISVYEGYGVISV 613
Query: 68 --PATEHQGP---------IQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
P Q P +D G L+ST V I V D ND P F Y SV E
Sbjct: 614 SRPLDYEQIPNGMIYLTVMAKDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYFVSVVEN 673
Query: 115 -QDGLAVGRVHATDADE----GQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G V ++ATD D GQ +++ YS+ F ++A +G+I T LD E + Y
Sbjct: 674 IMAGATVLFLNATDLDRSREYGQESII-YSLEGSSQFRINARSGEITTTSLLDREAKSEY 732
Query: 170 L 170
+
Sbjct: 733 I 733
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 70/172 (40%), Gaps = 28/172 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------A 69
Y + +G +++ V ATD D G FG V Y +D F+LD A
Sbjct: 454 LYNVSLYENVTVGTSVLTVLATDNDVGTFGEVNYFF----SDDPDRFSLDKDIGLIMLIA 509
Query: 70 TEHQGPIQ---------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA- 119
IQ D GG +T V I V D+ND P FQ Y ++ E + +
Sbjct: 510 KLDYELIQRFTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKDAYVGALRENEPSVTQ 569
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIPF------VVDANTGDIRTNKALDYEK 165
+ R+ ATD D N + YS+ F V G I ++ LDYE+
Sbjct: 570 LVRLRATDEDSPPNNQITYSIVNASAFGSYFDISVYEGYGVISVSRPLDYEQ 621
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 72/174 (41%), Gaps = 34/174 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-------ASYFNLDPATEHQGPIQDEGGL 82
G T+ + A D+D G+ + Y ++ NT++ + L+ + + P+ G +
Sbjct: 244 GTTVRVITAIDQDKGRPRGIGYTIVSGNTNSIFALDYISGALTLNGLLDRENPLYSHGFI 303
Query: 83 -----------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGR-V 123
+ T T NI V DIND PEF S Y ++ E Q G A+ +
Sbjct: 304 LTVKGTELNDDRTPSDATVTTTFNILVIDINDNAPEFNSSEYSVAITELAQVGFALPLFI 363
Query: 124 HATDADEGQNAV--VYYSVPEDIPFVVDANT----GDIRTNKA--LDYEKQQLY 169
D DEG N++ VY F++ + DIR A LDYE Y
Sbjct: 364 QVVDKDEGLNSMFEVYLVGNNSHHFIISPTSVQGKADIRIRVAIPLDYETVDRY 417
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 10/85 (11%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPY-----EFSVPEGQDGLAVGRVHATDADEGQNAVVY 137
+ ATVNI + DIND +P ++ PY E + P+ V V A D D G+N +
Sbjct: 749 TGIATVNITLLDINDNHPTWKDAPYYINLVEMTPPDSD----VTTVVAVDPDLGENGTLV 804
Query: 138 YSV-PEDIPFVVDANTGDIRTNKAL 161
YS+ P + + ++++TG IRT +
Sbjct: 805 YSIEPPNKFYSLNSSTGKIRTTHVM 829
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 69/170 (40%), Gaps = 37/170 (21%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDA----------------ASY--FNLDPATE 71
G +++ + ATD+D G G V Y L +A SY FNL
Sbjct: 2515 GTSVITMVATDQDEGSNGEVTYSLEGPGEEAFHVDMDSGLVTTKRPLHSYERFNLTVVAT 2574
Query: 72 HQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLP------YEFSVPEGQDGLAVGRVHA 125
G E L T + + V D+ND P F P +P + V V+A
Sbjct: 2575 DCG----EPPLWGTTMLLVEVIDVNDNRPVFVRPPNGTILHIREEIPLRSN---VYEVYA 2627
Query: 126 TDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
TD DEG N V YS + F +D +G I+T + LD EKQ +Y
Sbjct: 2628 TDKDEGLNGDVRYSFLKSTGNRDWEYFTIDPISGLIQTAQRLDREKQAVY 2677
Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 32/170 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI----------QD 78
+G + VKA D D+G G V + L N A F + + G + D
Sbjct: 1424 VGQRVATVKARDPDAGSNGQVVFSLASGNI--AGVFEIVTTNDSIGEVFVARPLDREELD 1481
Query: 79 EGGLSSTAT------------VNIRVTDINDKNPEFQSLPYEFSVPEGQD---GLAVGRV 123
L A+ + + + D+ND P +S P+ ++V ++ G A+ +V
Sbjct: 1482 HYILKVVASDRGTPPRKKDHILQVTILDVNDNPPVIES-PFGYNVSVNENVGGGTAIVQV 1540
Query: 124 HATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKA-LDYEKQQLY 169
ATD D G N+++ Y + ED+ F +D +G+I T A D E+Q Y
Sbjct: 1541 RATDRDIGINSLLSYYITEGNEDMTFRMDRTSGEIATRPAPPDRERQSFY 1590
Score = 42.7 bits (99), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 63/149 (42%), Gaps = 35/149 (23%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA-ASYFNLDPATEHQGPIQDEGGL 82
R++ L + +V ATDKD G G V Y L + + YF +DP + G IQ L
Sbjct: 2613 REEIPLRSNVYEVYATDKDEGLNGDVRYSFLKSTGNRDWEYFTIDPIS---GLIQTAQRL 2669
Query: 83 -----------------------SSTATVNIRVTDINDKNPEFQSLP-----YEF-SVPE 113
+ + + + DI+D P F P Y+ +VPE
Sbjct: 2670 DREKQAVYSLILVASDLGQPVPYETMQPLQVALDDIDDNEPLFLRPPKGSPQYQLLTVPE 2729
Query: 114 -GQDGLAVGRVH-ATDADEGQNAVVYYSV 140
G VG V A DADEG NA+VYY +
Sbjct: 2730 HSPRGTLVGNVTGAVDADEGSNAIVYYFI 2758
Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 72/180 (40%), Gaps = 36/180 (20%)
Query: 19 YGAMA-RDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y +A R+ +G +++ VKATD+D+G GLV Y +L + A F +D +T
Sbjct: 1203 YSRLALRETAGIGTSVIVVKATDRDTGDGGLVNYCIL---SGAEGKFEIDESTGLIITVD 1259
Query: 71 ----------------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
Q P ++G TV I + + D+ +F + YE ++ E
Sbjct: 1260 YLDYETKTSYLMNVSATDQAPPFNQG----FCTVYITLLNELDEAVQFSNTSYEAAIMEN 1315
Query: 115 QD-GLAVGRVHATDADEGQNAV----VYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + RV A D Y S F +DA TG I +D EK Y
Sbjct: 1316 LALGTEIVRVQAYSIDNINQITYRFDAYTSTQAKALFKIDATTGVITVKGLVDREKGDFY 1375
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 70/173 (40%), Gaps = 36/173 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------EHQGPIQ 77
G +++QV A D+DSG G + YR+ A F + P T E Q +
Sbjct: 2075 GFSVLQVTAMDEDSGLNGELIYRI---EAGAQDRFLIHPVTGLIRVGNATIDREEQESYR 2131
Query: 78 ------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDA 128
D G LS TA + I + DIND PEF + SV E G + V A D
Sbjct: 2132 LTVVATDRGTVPLSGTAIITILIDDINDCRPEFLNPIQTVSVLESATPGTVIANVTAIDR 2191
Query: 129 D---EGQNAVVYYSVPED----IP-----FVVDANTGDIRTNKALDYEKQQLY 169
D + + ++ +D +P F V+ NTG + L+ E Y
Sbjct: 2192 DLNPKLEYHIIGIVAKDDTDRLVPDQEDAFAVNINTGSVMVKSPLNRELVATY 2244
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 86 ATVNIRVTDINDKNPEFQSLP---YEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
A + + + D+ND P+F+ Y + EG G + V A D D+G N ++ Y++
Sbjct: 2267 AKLTVNILDVNDNTPQFKPFGITYYTEKILEGATPGTTLIAVAAVDPDKGLNGLITYTLL 2326
Query: 142 EDIP----FVVDANTGDIRTNKALDYEK 165
+ +P + D++ G + N+ +DYE+
Sbjct: 2327 DLVPPGYVQLEDSSAGKVIANRTVDYEE 2354
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 68/171 (39%), Gaps = 28/171 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y + +G + V ATD D G G V Y + +F +D A IQ+
Sbjct: 129 YSVRIPENTPVGTPIFIVNATDPDLGAGGSVLYSF----QPPSQFFAIDSARGIITVIQE 184
Query: 79 --------------------EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDG 117
LS+ A + I +TD+ D +P F +LPY ++ E G
Sbjct: 185 LDYETTQAYQLTVNATDQDKTRPLSTLANLAIIITDVQDMDPIFINLPYSTNIYEHSPPG 244
Query: 118 LAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEK 165
V + A D D+G+ + Y++ + F +D +G + N LD E
Sbjct: 245 TTVRVITAIDQDKGRPRGIGYTIVSGNTNSIFALDYISGALTLNGLLDREN 295
>gi|332228049|ref|XP_003263203.1| PREDICTED: cadherin-12 [Nomascus leucogenys]
Length = 626
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 65/134 (48%), Gaps = 30/134 (22%)
Query: 33 LMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----------------EHQ 73
++QVKATD D +G V Y +L YF++DP T ++Q
Sbjct: 30 VLQVKATDADDPTYGNSARVVYSILQGQ----PYFSIDPKTGVIRTALPNMDREVKEQYQ 85
Query: 74 GPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
IQ + GGL+ T VNI +TD+ND P F + VPE G A+GR+ A
Sbjct: 86 VLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPESSPIGSAIGRIRAV 145
Query: 127 DADEGQNAVVYYSV 140
D D GQNA + Y++
Sbjct: 146 DPDFGQNAEIEYNI 159
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 68/156 (43%), Gaps = 18/156 (11%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQ-----------GPIQ 77
+G + +++A D D G+ +EY ++ D + F++ + Q G I
Sbjct: 135 IGSAIGRIRAVDPDFGQNAEIEYNIVPG--DGGNLFDIVTDEDTQEGVIKLKKLQCGGIH 192
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVV 136
G TATV I V D+ D+ P F Y V E G +G V A D D G +AV
Sbjct: 193 SAGPFKDTATVKISVLDV-DEPPVFSRPLYTMEVYEDTPVGTIIGAVTAQDLDVGSSAVR 251
Query: 137 Y---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y + D F +D N G I TN+ LD E Y
Sbjct: 252 YFIDWKSDGDSYFTIDGNEGTIATNELLDRESTAQY 287
>gi|327283350|ref|XP_003226404.1| PREDICTED: protocadherin-11 X-linked-like, partial [Anolis
carolinensis]
Length = 1038
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 74/165 (44%), Gaps = 24/165 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G L ++ ATD DSG+ + Y L DA FNLD T E Q
Sbjct: 482 GTQLTKISATDADSGRNADISYML---GLDAPPIFNLDRRTGILTAVRKLDREKQDRYSF 538
Query: 76 ---IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
+D G L + ATV + V D ND +P F Y F VPE VG + TDAD
Sbjct: 539 TVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLPMYGTVGLITVTDAD 598
Query: 130 EGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYLERV 173
G+NA V S+ F++D TG IR N D E+Q Y +V
Sbjct: 599 SGENAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQV 643
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
SSTA + + VTD+ND P F+ E SVPE G +V ++HATDAD G NA +++
Sbjct: 230 SSTAILQVTVTDVNDNRPVFKDNDIEVSVPENAPVGTSVSQLHATDADLGSNAQIHFYFS 289
Query: 142 EDIP------FVVDANTGDIRTNKALDYEKQQLY 169
I F +D TG I + LD E+ ++
Sbjct: 290 SQISNLARRLFAIDNTTGLITIKEPLDREESSVH 323
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 20/169 (11%)
Query: 21 AMARDKHELGVTLMQVKATDKDS---GKFGL-----VEYRL---LDNN--TDAASYFNLD 67
+ +K L + + DKD+ GK V +RL DN + A++ + +
Sbjct: 368 VLLSEKAPLNTKIALITVMDKDADLNGKVTCFTDHDVPFRLKPVFDNQFLLETATFLDYE 427
Query: 68 PATEHQGPI--QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
E+ I D G L+ +A + I++ D ND P F S+PE G + +
Sbjct: 428 TTREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPENNAPGTQLTK 487
Query: 123 VHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+ ATDAD G+NA + Y + D P F +D TG + + LD EKQ Y
Sbjct: 488 ISATDADSGRNADISYMLGLDAPPIFNLDRRTGILTAVRKLDREKQDRY 536
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 63/150 (42%), Gaps = 30/150 (20%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ--- 77
T+ + TD DSG+ V +L+ + F +DP T E QG
Sbjct: 588 TVGLITVTDADSGENAAVTLSILNGRDN----FIIDPLTGVIRPNITFDREQQGSYTFQV 643
Query: 78 ---DEGGL--SSTATVNIRVTDINDKNPEF----QSLPYEFSVPEGQDGLAVGRVHATDA 128
D G L SSTA V I V D+ND P F + Y+ G V +V A D
Sbjct: 644 KAVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYDLVPMSTSPGSVVTKVFAVDN 703
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDI 155
D G NA + YS+ FV+D TG++
Sbjct: 704 DTGMNAELRYSIIGGNSRGLFVIDQLTGNV 733
>gi|66773340|ref|NP_001018871.1| protocadherin 1 gamma 3 precursor [Danio rerio]
gi|50881548|gb|AAT85354.1| protocadherin cluster 1 gamma 3 [Danio rerio]
Length = 939
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGPI 76
G +++V ATD D G G V Y + A+ F++D T E I
Sbjct: 257 GTEIIRVSATDADEGPNGEVTYEFSRISDKASKLFSIDKKTGQILVTEEIDYESEKNYEI 316
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
QD GL+STATV I +TD+ND P +PE + G VG ++ D D G
Sbjct: 317 GIHAQDGSGLASTATVIIDITDVNDNPPRIILKSLNNPIPENSEPGAEVGIINVQDQDSG 376
Query: 132 QNAVVYYSVPEDIPFVVD---ANTGDIRTNKALDYEKQQLY 169
+N + SV +++PF ++ N + KALD EK+ Y
Sbjct: 377 ENRQIRCSVQQNVPFKLNPSVKNYFSLVMTKALDREKESDY 417
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYY--- 138
S TA ++I V D ND P F Y+ ++ E G + RV ATDADEG N V Y
Sbjct: 222 SGTAVIHITVLDANDNVPVFDQPVYKVTLAENTPSGTEIIRVSATDADEGPNGEVTYEFS 281
Query: 139 --SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
S F +D TG I + +DYE ++ Y
Sbjct: 282 RISDKASKLFSIDKKTGQILVTEEIDYESEKNY 314
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 26/167 (15%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-----NTDAASYFNL------DPATEHQ 73
+ E G + + D+DSG+ + + N N +YF+L D E
Sbjct: 357 ENSEPGAEVGIINVQDQDSGENRQIRCSVQQNVPFKLNPSVKNYFSLVMTKALDREKESD 416
Query: 74 GPIQ---DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
I +GG LS++ T+++ V+D+ND P F+ Y + E G +V V A
Sbjct: 417 YNITITATDGGSPPLSTSMTIHLFVSDVNDNPPVFEQQVYSAYINENNKVGTSVCSVSAN 476
Query: 127 DADEGQNAVVYYS-VPEDIPFV-------VDANTGDIRTNKALDYEK 165
D D QN V YS VP ++ V ++ +TG I T ++ DYE+
Sbjct: 477 DPDWRQNGTVLYSLVPSEVSGVPVSSFLSINGDTGVIHTVRSFDYEQ 523
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 45/192 (23%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA---ASYFNL--DPATEH- 72
Y A + +++G ++ V A D D + G V Y L+ + +S+ ++ D H
Sbjct: 456 YSAYINENNKVGTSVCSVSANDPDWRQNGTVLYSLVPSEVSGVPVSSFLSINGDTGVIHT 515
Query: 73 --------------QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ- 115
+ +D G LSS TV + +TD ND +P+ + VP+G+
Sbjct: 516 VRSFDYEQFRNFSVKVVARDNGSPPLSSNVTVKVFITDENDNSPQIL-----YPVPDGKT 570
Query: 116 -----------DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKAL 161
G V +V A DAD GQNA + Y + + F + ++G+I+T + +
Sbjct: 571 LMTEMVPKATLSGSLVSKVIAVDADSGQNAWLSYQILKSTDPGLFTIGLHSGEIKTQRDI 630
Query: 162 ---DYEKQQLYL 170
D KQ L +
Sbjct: 631 SESDNMKQNLVI 642
>gi|158297319|ref|XP_555589.3| AGAP007909-PA [Anopheles gambiae str. PEST]
gi|157015138|gb|EAL39705.3| AGAP007909-PA [Anopheles gambiae str. PEST]
Length = 361
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 89/197 (45%), Gaps = 52/197 (26%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGP 75
Y A + LG T++QV ATD+D+G+ G VEY + +D F +DPAT P
Sbjct: 135 YFATVPENATLGTTVLQVYATDQDAGENGQVEYAINRRQSDKEQMFRIDPATGLISVNKP 194
Query: 76 I--------------QDEG--GLSSTATVNIRVTDINDKNPEFQSL-------------- 105
+ +D G L +TA V+IRVTD+ND P +
Sbjct: 195 LDFETRELHELVVVAKDRGMQPLETTAFVSIRVTDVNDNQPIINVIFLSDDATPKISESA 254
Query: 106 -PYEF----------SVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------FV 147
P EF +V E D G +V +V A D DEG N+ + YS+ D P F
Sbjct: 255 QPGEFVARISDVYHANVMEVADPGTSVIQVTAVDRDEGNNSAIVYSL-LDTPDTHSHWFQ 313
Query: 148 VDANTGDIRTNKALDYE 164
+D+++G I T +D E
Sbjct: 314 IDSHSGLITTRAHIDCE 330
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L TVNI + D+ND P F Y +VPE G V +V+ATD D G+N V Y++
Sbjct: 110 LRGQMTVNITIQDVNDNQPIFNQSRYFATVPENATLGTTVLQVYATDQDAGENGQVEYAI 169
Query: 141 -----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ F +D TG I NK LD+E ++L+
Sbjct: 170 NRRQSDKEQMFRIDPATGLISVNKPLDFETRELH 203
>gi|326916835|ref|XP_003204710.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16-like [Meleagris
gallopavo]
Length = 3001
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNA-VV 136
E + T+TV I +TD ND +P Y F+VPE Q G +VGRV A+D D GQN+ +
Sbjct: 1060 EARKTGTSTVRISITDENDNSPRLSEERYFFTVPENQAPGSSVGRVMASDRDAGQNSRLT 1119
Query: 137 YYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y + D F++ TG++ T +LD E+Q Y
Sbjct: 1120 YRLLQHDSNFLIHTQTGELSTKHSLDREQQSSY 1152
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 63/145 (43%), Gaps = 20/145 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-NTDAASYFNLDPATEHQG 74
S FY ++ +G +QV ATD DSG FG + Y L + + F +D T H
Sbjct: 557 SNFYNVSLKENTPVGTCFLQVTATDADSGLFGTLSYSLGSGIGSVVPTQFGIDKHTGHLC 616
Query: 75 PIQ------------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQ 115
Q D GGL+S V + + DIND P F L Y S+ +
Sbjct: 617 TAQPLDRDEGTSAYDFTITAVDGGGLNSMVYVKVFLEDINDNRPVFYPLEYAASISTQSM 676
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV 140
G AV RV A D DEG + V Y +
Sbjct: 677 PGTAVLRVTAHDKDEGMHGKVTYRI 701
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 25/160 (15%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN----------------NTDAASY- 63
A R+ G + ++A D D+G FG ++Y +L+ N+ +
Sbjct: 2409 ASMRENLPPGTLVTTLRAIDTDTGVFGELQYAVLEQPVGGPGAAEGRDAFAINSSSGELR 2468
Query: 64 ----FNLDPATEHQGPIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QD 116
F+ + A Q ++ D G S+T TV + VT ++ +P F S + F VPEG
Sbjct: 2469 SRLTFDYERAKAFQLLVRATDAGNASATVTVRVLVTGEDEYDPIFLSPSFSFEVPEGAHK 2528
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDI 155
G ++GRV ATD DEG + VV Y++ + P F ++ TG I
Sbjct: 2529 GQSIGRVLATDEDEGADGVVLYNLAKPSPYFAINQTTGTI 2568
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 75/161 (46%), Gaps = 24/161 (14%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP--------------- 75
V L ++ATD D + G +EYR+ D D F LDP +
Sbjct: 1460 VALYTLRATDPDGDENGRLEYRVADG--DPEQDFILDPVSGVLSTARALDREQVAFYSLT 1517
Query: 76 --IQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
+QD G S+T +VN++V D+ND P F Y VPE G V ++ A D DE
Sbjct: 1518 VVVQDHGTPPRSATMSVNVQVLDLNDNAPGFAQASYVVEVPEDLPVGSLVLQLEAKDPDE 1577
Query: 131 GQNA-VVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
G N V YY E + F V+ +G IR+ + LD E+Q Y
Sbjct: 1578 GTNGQVTYYLGNESLGMFQVEPQSGRIRSAQELDRERQPSY 1618
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 76/162 (46%), Gaps = 26/162 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI---------- 76
G ++QV A DKD G G V+Y + + +S+F +DPAT P+
Sbjct: 464 GSFVLQVTARDKDQGPNGEVQYSIKHSQDTHSSWFAIDPATGIITTAAPLDYEKDPQPQL 523
Query: 77 ----QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
D G LSS+A V + + D+ND P F+S Y S+ E G +V ATDAD
Sbjct: 524 TVLATDRGTPALSSSAVVLVALQDVNDNEPVFRSNFYNVSLKENTPVGTCFLQVTATDAD 583
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEK 165
G + YS+ I F +D +TG + T + LD ++
Sbjct: 584 SGLFGTLSYSLGSGIGSVVPTQFGIDKHTGHLCTAQPLDRDE 625
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 78/175 (44%), Gaps = 31/175 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-----ATEHQ 73
Y A + G ++QV ATD+D G G V Y L + F++ P T H
Sbjct: 1347 YEAHITENLPAGSPVLQVLATDRDLGANGQVTYGGL-----SGGPFSIHPQTGLIVTTH- 1400
Query: 74 GPIQDE-------------GGLS---STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG 117
P+ E GGL S ATV I V D ND P+ +S VPE Q
Sbjct: 1401 -PLDREEQEQHVLMVYARDGGLPPNLSKATVRITVGDENDHTPQLESESCSVEVPENQSR 1459
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+A+ + ATD D +N + Y V + P F++D +G + T +ALD E+ Y
Sbjct: 1460 VALYTLRATDPDGDENGRLEYRVADGDPEQDFILDPVSGVLSTARALDREQVAFY 1514
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 22/175 (12%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA------- 69
L Y A + G +++V A DKD G G V YR++ N+ N D
Sbjct: 665 LEYAASISTQSMPGTAVLRVTAHDKDEGMHGKVTYRIVLGNSPPLFSLNKDTGVISLSWS 724
Query: 70 ------TEHQGPI--QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGL 118
T Q I +D GGL + A VNI + + P F+ Y F+VPE G
Sbjct: 725 LSGKANTLVQLVISAEDGGGLQAQPNARVNISIVEGTVSPPVFEQAQYFFTVPEDTLQGA 784
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYL 170
+VG V A + G ++YS+ P F +D+++G +RT+ LD+E Q + +
Sbjct: 785 SVGAVRAQNP-PGHTDDIFYSISSGDPHGYFSIDSDSGQLRTSLPLDHESQAVLV 838
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVP 141
SS T+++ V DIND P F Y + E + G ++ +V A+DADEG N V Y +
Sbjct: 212 SSQMTLDVSVQDINDNAPTFNQSRYHTLISENLKPGSSILQVFASDADEGDNGDVIYEIN 271
Query: 142 E-----DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D+ TG I+ NK LDYE ++++
Sbjct: 272 RRQSDPDQYFTIDSRTGVIKLNKGLDYEVRKVH 304
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 26/165 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNT---------DAASYFNLDPATEHQGP----- 75
G ++ +V A+D+D+G+ + YRLL +++ + ++ +LD E Q
Sbjct: 1099 GSSVGRVMASDRDAGQNSRLTYRLLQHDSNFLIHTQTGELSTKHSLD--REQQSSYQLLV 1156
Query: 76 -IQDEGG--LSSTATVNIRVTDINDKNPEFQSLP--YEFSV---PEGQDGLAVGRVHATD 127
+QD G S+T T+ + V D ND P F + E +V E GL V + A D
Sbjct: 1157 IVQDGGAPPRSATGTIYVTVLDENDNAPAFLHIAAGQELTVQVLEEKPSGLLVASLQAKD 1216
Query: 128 ADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYL 170
DEG+N + YS+ F + TG++RT L + Y+
Sbjct: 1217 PDEGENGTITYSLTGAWAERFTLHTATGELRTATVLRRSDRAEYV 1261
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVP 141
S+T ++I V D+ND+ P F+ YE + E G V +V ATD D G N V Y
Sbjct: 1323 SATQLLSILVLDVNDEAPTFEKPEYEAHITENLPAGSPVLQVLATDRDLGANGQVTYGGL 1382
Query: 142 EDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
PF + TG I T LD E+Q+ ++ V+
Sbjct: 1383 SGGPFSIHPQTGLIVTTHPLDREEQEQHVLMVY 1415
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 64/146 (43%), Gaps = 28/146 (19%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA------SYFNLDP--- 68
FY + G L+ + ATD DSG G + + L + D A + F + P
Sbjct: 2082 FYQVTLPEHTPAGSILLTMSATDMDSGSNGEITFHLAVPSLDVAIDPSNGTLFTIRPVEF 2141
Query: 69 ------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
A +H P LSS ATV ++V D+ND +P FQ Y SVPE +
Sbjct: 2142 DANQPTLELVVEARDHGSP-----SLSSWATVQLQVLDVNDHSPIFQVPHYNASVPEDLR 2196
Query: 116 DGLAVGRVHATDAD-EGQNAVVYYSV 140
G V + A DAD +NA Y++
Sbjct: 2197 PGTTVLTLDAGDADLSRENAGFDYTI 2222
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV 140
L + +T ++V DIND P F Y+ S+PE G V +V A D D+G N V YS+
Sbjct: 428 LRAESTFVLQVIDINDNPPLFDQQEYKQSIPEVVYPGSFVLQVTARDKDQGPNGEVQYSI 487
Query: 141 P-----EDIPFVVDANTGDIRTNKALDYEK 165
F +D TG I T LDYEK
Sbjct: 488 KHSQDTHSSWFAIDPATGIITTAAPLDYEK 517
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVP 141
S+T V I V D+ND P F Y +V E G + RV A DAD G V+Y++
Sbjct: 2279 STTVPVLITVQDVNDNPPVFARAEYRTAVSESTPPGTELLRVTAHDADSGPRGHVHYTIS 2338
Query: 142 ---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ F + +TG + + LD E Q L+
Sbjct: 2339 SGDQHGLFQIHESTGALCLARPLDRETQALH 2369
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIPF 146
+N+ + D+ND P FQ Y + E Q V +V A D D+G N V Y++ + +P
Sbjct: 1858 INLNLQDVNDNLPRFQLQNYVAFIWESQSYDSPVIQVLADDLDQGMNGQVTYAINQSLPM 1917
Query: 147 V----VDANTGDIRTNKALDYE 164
+D TG I T LD E
Sbjct: 1918 TGLYHIDPQTGTITTAAILDRE 1939
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 68/170 (40%), Gaps = 32/170 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGPIQDE------- 79
G L++V A D DSG G V Y + ++ D F + +T P+ E
Sbjct: 2314 GTELLRVTAHDADSGPRGHVHYTI--SSGDQHGLFQIHESTGALCLARPLDRETQALHAL 2371
Query: 80 --------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADE 130
GG + V I V D+ND P F S+ E G V + A D D
Sbjct: 2372 VVQAMDVPGGHFALVPVAIEVKDVNDNKPYFPVEVLSASMRENLPPGTLVTTLRAIDTDT 2431
Query: 131 GQNAVVYYSVPEDI-----------PFVVDANTGDIRTNKALDYEKQQLY 169
G + Y+V E F +++++G++R+ DYE+ + +
Sbjct: 2432 GVFGELQYAVLEQPVGGPGAAEGRDAFAINSSSGELRSRLTFDYERAKAF 2481
Score = 38.9 bits (89), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE--DIPF 146
I V+D+ND P F S +PE + G AV + A D D G N V + + + F
Sbjct: 858 ISVSDVNDNAPAFPSPSDSILLPEATEPGTAVYTLQAEDRDSGANGQVNFELVXGGEGTF 917
Query: 147 VVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
V+ ++G +R L YE Y R+ ++++
Sbjct: 918 SVERSSGAVRLAGVLQYEASAAY--RLAIVAR 947
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY--SVPE 142
A + + V D+ND P F Y+ ++PE G + + ATD D G N + + +VP
Sbjct: 2062 ANLTVIVEDVNDNAPAFSQAFYQVTLPEHTPAGSILLTMSATDMDSGSNGEITFHLAVPS 2121
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ +D + G + T + ++++ Q LE V
Sbjct: 2122 -LDVAIDPSNGTLFTIRPVEFDANQPTLELV 2151
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 56/141 (39%), Gaps = 30/141 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y + + + G +++QV A+D D G G V Y + +D YF +D T G I+
Sbjct: 236 YHTLISENLKPGSSILQVFASDADEGDNGDVIYEINRRQSDPDQYFTIDSRT---GVIKL 292
Query: 79 EGGLS----------------------STATVNIRVTDINDKNPE----FQSLPYEFSVP 112
GL +TA V I V D ND P F S +
Sbjct: 293 NKGLDYEVRKVHELVVQARDRAVHPEVTTAFVTIHVRDYNDNQPTMTIIFLSEDGSPQIS 352
Query: 113 EG-QDGLAVGRVHATDADEGQ 132
EG Q G V R+ +D D G+
Sbjct: 353 EGAQPGQYVARISVSDPDYGE 373
>gi|119625019|gb|EAX04614.1| FAT tumor suppressor homolog 1 (Drosophila), isoform CRA_a [Homo
sapiens]
Length = 3377
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 17/132 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI-- 76
L +M+VK TD DSG +G V Y ++++ Y N LD T + I
Sbjct: 2507 LHTLVMEVKTTDGDSGIYGHVTYHIVNDFAKDRFYINERGQIFTLEKLDRETPAEKVISV 2566
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEG 131
+D GG + TVN+ +TD ND P+F++ YE ++ G +V +V A+DADEG
Sbjct: 2567 RLMAKDAGGKVAFCTVNVILTDDNDNAPQFRATKYEVNIGSSAAKGTSVVKVLASDADEG 2626
Query: 132 QNAVVYYSVPED 143
NA + Y++ D
Sbjct: 2627 SNADITYAIEAD 2638
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 75/160 (46%), Gaps = 23/160 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ ATD D + Y LL + A F L+P T E Q
Sbjct: 3039 GKLIMQISATDADIRSNAEITYTLLGS---GAEKFKLNPDTGELKTSTPLDREEQAVYHL 3095
Query: 78 -----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D GG A++ + + D+ND PEF + PY +V E + G + RV ATDAD G
Sbjct: 3096 LVRATDGGGRFCQASIVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDADAG 3155
Query: 132 QNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
N + YS+ + D F ++ +G I+ K LD E Q +Y
Sbjct: 3156 LNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVY 3195
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 29/176 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
++ ++ DK E+ ++QV+ATDKD G G V Y +L +TD F++D T
Sbjct: 827 YFVEVSEDK-EVHSEIIQVEATDKDLGPNGHVTYSIL-TDTDT---FSIDSVTGVVNIAR 881
Query: 71 --------EHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
EH I+ +E L ST V + + D+ND P F Y V E
Sbjct: 882 PLDRELQHEHSLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTFIPPNYRVKVREDLP 941
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
+G + + A D D GQ+ V YS+ + + F VD +G +R + LD+EK+Q+Y
Sbjct: 942 EGTVIMWLEAHDPDLGQSGQVRYSLLDHGEGNFDVDKLSGAVRIVQQLDFEKKQVY 997
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKN 99
D+ SG+ L + LD+ T F++ QD+ + ++ V+I+V D ND +
Sbjct: 2754 DRQSGRLKL--EKSLDHETTKWYQFSILARC-----TQDDHEMVASVDVSIQVKDANDNS 2806
Query: 100 PEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI------PFVVDANT 152
P F+S PYE F V G V ++ A+DAD G N V YS+ + F ++ T
Sbjct: 2807 PVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMET 2866
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G I T K LD+EK+ Y +V
Sbjct: 2867 GWITTLKELDHEKRDNYQIKV 2887
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 75/172 (43%), Gaps = 21/172 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + E G L +V+ATD D+G + Y L+D+ S L + + P+
Sbjct: 3130 YAITVFENTEPGTLLTRVQATDADAGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDR 3189
Query: 78 -------------DEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAV 120
D+G L++T TV + V DIND P F+ Y +V E G V
Sbjct: 3190 ELQAVYTLSLKAVDQGLPRRLTATGTVIVSVLDINDNPPVFEYREYGATVSEDILVGTEV 3249
Query: 121 GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V+A D NA + YS+ E F +D+ TG + + LDYE Y
Sbjct: 3250 LQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEY 3301
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 23/160 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + +G +++QV+ATD DS + Y++ N++ + +F++D +T
Sbjct: 2288 YAVTLSEASVIGTSVVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRT 2347
Query: 71 -------EHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
+H ++ +GG LSS V + VTD+ND P F+ YE + E G
Sbjct: 2348 LDYEQSRQHTIFVRAVDGGMPTLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPHGH 2407
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
V V A DAD + YS+ + FV+D+ TG I
Sbjct: 2408 FVTCVKAYDADSSDIDKLQYSILSGNDHKHFVIDSATGII 2447
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVY 137
+G SS A V ++V D ND +P + Y ++PE G + ++ ATDAD NA +
Sbjct: 3000 DGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPEDVLPGKLIMQISATDADIRSNAEIT 3059
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ F ++ +TG+++T+ LD E+Q +Y
Sbjct: 3060 YTLLGSGAEKFKLNPDTGELKTSTPLDREEQAVY 3093
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 57/135 (42%), Gaps = 2/135 (1%)
Query: 37 KATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIN 96
KA + G F + R NT + D T ++ + + V ++V D N
Sbjct: 84 KAEEYILGDFCFLRIRTKGGNTAILNREVKDHYTLIVKALEKNTNVEARTKVRVQVLDTN 143
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGD 154
D P F Y S+PE ++ RV ATDAD G N YYS + F + +G
Sbjct: 144 DLRPLFSPTSYSVSLPENTAIRTSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGV 203
Query: 155 IRTNKALDYEKQQLY 169
I LDY + +LY
Sbjct: 204 IVLTGRLDYLETKLY 218
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 75/173 (43%), Gaps = 36/173 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLD--------------------- 67
G ++Q++A+D DSG G V Y L + + F ++
Sbjct: 2825 GSRVIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQ 2884
Query: 68 ---PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRV 123
A++H IQ LSSTA V++ VTD+ND P F + Y+ +V E G + +
Sbjct: 2885 IKVVASDHGEKIQ----LSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSEDDPQGGVIAIL 2940
Query: 124 HATDAD-EGQNAVVYYSVPEDIP---FVVDA--NTGDIRTNKALDYEKQQLYL 170
TDAD E N V Y + P F V+ N + K LD EK+ YL
Sbjct: 2941 STTDADSEEINRQVTYFITGGDPLGQFAVETIQNEWKVYVKKPLDREKRDNYL 2993
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE 142
++ V ++V N PEF Y+ + E G V + A D DEG+N V YS+
Sbjct: 445 ASTKVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYSIAN 504
Query: 143 --DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSY 183
+PF +D TG + T++ LDYE + RV+ + A+ +
Sbjct: 505 LNHVPFAIDHFTGAVSTSENLDYE----LMPRVYTLRIRASDW 543
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 71/160 (44%), Gaps = 24/160 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE-------------HQGPI--- 76
++Q+ A D+D K L+ + + F LDPAT HQ +
Sbjct: 1475 ILQISAVDQDE-KNKLIYTLQSSRDPLSLKKFRLDPATGSLYTSEKLDHEAVHQHTLTVM 1533
Query: 77 ---QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
QD + A + + V+D ND P F + Y+ V E G V +V A D D+G+
Sbjct: 1534 VRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVTALDKDKGK 1593
Query: 133 NAVVYYSVPE-DI--PFVVDANTGDIRTNKALDYEKQQLY 169
NA V YS+ +I F++D G I+T K LD Q Y
Sbjct: 1594 NAEVLYSIESGNIGNSFMIDPVLGSIKTAKELDRSNQAEY 1633
Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 11/101 (10%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR--------VHATDADEG 131
GLS+ TV + + D ND P F Y + E +V + A DAD+
Sbjct: 1743 AGLSTNTTVLVHLQDENDNAPVFMQAEYTGLISESASINSVVLTDRNVPLVIRAADADKD 1802
Query: 132 QNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
NA++ Y + E F +D++TG I T +LDYE+ ++
Sbjct: 1803 SNALLVYHIVEPSVHTYFAIDSSTGAIHTVLSLDYEETSIF 1843
Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 19/167 (11%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQGPIQD 78
G ++ +G +++ + +TD D+G G + Y + N D+ +++ + P+
Sbjct: 723 GIQVKENQPVGSSVIFMNSTDLDTGFNGKLVYAVSGGNEDSCFMIDMETGMLKILSPLDR 782
Query: 79 EG-------------GLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VG 121
E G+ A +++ V D ND PEF Y V E ++ + +
Sbjct: 783 ETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSEDKEVHSEII 842
Query: 122 RVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQ 167
+V ATD D G N V YS+ D F +D+ TG + + LD E Q
Sbjct: 843 QVEATDKDLGPNGHVTYSILTDTDTFSIDSVTGVVNIARPLDRELQH 889
Score = 42.7 bits (99), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 34/178 (19%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-- 70
TS+ ++Y + + + V+++Q++A D DS + Y++ N +F++ P T
Sbjct: 1139 TSEPVYYPEIMENSPK-DVSVVQIEAFDPDSSSNDKLMYKITSGNPQG--FFSIHPKTGL 1195
Query: 71 --------------EH--QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH + + D G S+ A V +++ D ND P+F Y+ +P
Sbjct: 1196 ITTTSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLP 1255
Query: 113 EGQ--DGLAVGR------VHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNK 159
E + D R V ATD DEG NA + YS+ E F ++ TG + + +
Sbjct: 1256 EREKPDRERNARREPLYHVIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTGVVSSKR 1313
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 73/184 (39%), Gaps = 50/184 (27%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + +G ++QV A DKD GK V Y + N + F +DP G I+
Sbjct: 1567 YKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSIESGNI--GNSFMIDPVL---GSIKT 1621
Query: 78 -------------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
D+G +S +V I VT ++ +P+F S Y + E
Sbjct: 1622 AKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASPKFTSKEYSVELSETVS 1681
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD----------IRTNKALDYEK 165
G VG V A Q++VVY + D NTGD I T KALD+E
Sbjct: 1682 IGSFVGMVTA----HSQSSVVYE--------IKDGNTGDAFDINPHSGTIITQKALDFET 1729
Query: 166 QQLY 169
+Y
Sbjct: 1730 LPIY 1733
Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 34/178 (19%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
+L Y A+ + E+G + V A D+DSG+ G V Y L +++ +F + P E
Sbjct: 2083 NLPYYAVVKVDTEVGHVIRYVTAVDRDSGRNGEVHYYLKEHH----EHFQIGPLGEISLK 2138
Query: 76 IQ-----------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
Q D G + +A V + +T +N P F+ Y + E
Sbjct: 2139 KQFELDTLNKEYLVTVVAKDGGNPAFSAEVIVPITVMNKAMPVFEKPFYSAEIAESI--- 2195
Query: 119 AVGRVHA----TDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+VH+ A+ + V+YS+ + P F ++ NTG I LD+E Y
Sbjct: 2196 ---QVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAPLDFEAHPAY 2250
Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 17/112 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--------TDAASYF---NLD 67
YGA + +G ++QV A +D + Y ++ N + + F NLD
Sbjct: 3235 YGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLD 3294
Query: 68 PATEHQGPIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
+ H+ + E GG LS ATVN+ VTDIND P F Y + E
Sbjct: 3295 YESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISE 3346
Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G + V+I V DIND P F Y ++ E G +V +V ATD+D N + Y
Sbjct: 2262 GAHAEVFVDIIVDDINDNPPVFAQQSYAVTLSEASVIGTSVVQVRATDSDSEPNRGISYQ 2321
Query: 140 V-----PEDIPFVVDANTGDIRTNKALDYEKQQ 167
+ F VD++TG I + LDYE+ +
Sbjct: 2322 MFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSR 2354
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVY 137
+G + V I+V D ND P+F + YE +PE + ++ A D DE +N ++Y
Sbjct: 1433 DGTTTILTQVFIKVIDTNDHRPQFSTSKYEVVIPEDTAPETEILQISAVDQDE-KNKLIY 1491
Query: 138 YSVPEDIP-----FVVDANTGDIRTNKALDYE 164
P F +D TG + T++ LD+E
Sbjct: 1492 TLQSSRDPLSLKKFRLDPATGSLYTSEKLDHE 1523
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 30/171 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDN---------------------NTDAASYFNLD 67
+G +M V A D+D+G+ G + Y + D + ++ S++ L
Sbjct: 1049 VGSLVMTVSAHDEDAGRDGEIRYSIRDGSGVGVFKIGEETGVIETSDRLDRESTSHYWLT 1108
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
QG + LSS + I V D+ND P+ Y + E ++V ++ A
Sbjct: 1109 VFATDQGVVP----LSSFIEIYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAF 1164
Query: 127 DADEGQNAVVYYSVPEDIP---FVVDANTGDI-RTNKALDYEKQQLYLERV 173
D D N + Y + P F + TG I T++ LD E+Q ++ V
Sbjct: 1165 DPDSSSNDKLMYKITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILEV 1215
Score = 35.8 bits (81), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 32/169 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYF-NLD- 67
Y A + +G T+M + A D D G+ G V Y + +D+ T A S NLD
Sbjct: 468 YKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYSIANLNHVPFAIDHFTGAVSTSENLDY 527
Query: 68 -----------PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
A++ P + E + +T T+N ++ND P F+ + E ++P
Sbjct: 528 ELMPRVYTLRIRASDWGLPYRREVEVLATITLN----NLNDNTPLFEKINCEGTIPRDLG 583
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKAL 161
G + V A DADE Q +V Y + E F ++ N+G + ++L
Sbjct: 584 VGEQITTVSAIDADELQ--LVQYQIEAGNELDLFSLNPNSGVLSLKRSL 630
>gi|410948469|ref|XP_003980961.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-3 [Felis catus]
Length = 731
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 71/175 (40%), Gaps = 26/175 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
Y + L ++ V ATD D+G FG V Y + + F L+P T G IQ
Sbjct: 246 LYEVQILENSPLNSVVVTVSATDLDTGNFGTVSYAFFHASEEIRKTFQLNPIT---GDIQ 302
Query: 78 --------------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG 117
D GGLS TV ++V D+ND PE +PE
Sbjct: 303 LVKYLNFEEMNTYELDIEAKDGGGLSGKTTVIVQVVDVNDNPPELTLSSITSPIPENSPE 362
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
V +D D G+N + S+ + +PF++ + + + TN LD E + Y
Sbjct: 363 TVVAVFSVSDLDSGENGRIMCSIEDSLPFILKPSVENFYTLLTNTPLDRETKSEY 417
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L + + + V+D+ND P F Y V E L +G V ATD D G NA V YS+
Sbjct: 431 LKTQHNITVTVSDVNDNAPAFSQTTYTLRVRENNSPALHIGSVSATDRDSGANAQVTYSL 490
Query: 141 --PED--IPFV----VDANTGDIRTNKALDYEKQQLY 169
P D +P ++A+ G + ++LDYE + +
Sbjct: 491 LPPADPQLPLASLVSINADNGQLFALRSLDYEALRAF 527
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS-- 139
S A ++I V DIND PEF YE + E V V ATD D G V Y+
Sbjct: 223 SGIAKIHILVLDINDNAPEFTQTLYEVQILENSPLNSVVVTVSATDLDTGNFGTVSYAFF 282
Query: 140 -VPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
E+I F ++ TGDI+ K L++E+ Y
Sbjct: 283 HASEEIRKTFQLNPITGDIQLVKYLNFEEMNTY 315
>gi|334314674|ref|XP_001379954.2| PREDICTED: cadherin-24 [Monodelphis domestica]
Length = 776
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 82/185 (44%), Gaps = 31/185 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGP 75
Y A + +G +++QV A D D +G +L+ D +F++DP T P
Sbjct: 150 YHATVPEMSNVGTSVIQVTAQDADDPSYG-NSAKLVYTVLDGLPFFSVDPQTGVVRTAIP 208
Query: 76 IQDE-------------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
D GGLS + TV + ++D+ND P+F Y+FSV E
Sbjct: 209 NMDRETQEVFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAG 268
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV-----PEDIPFVVDANTGD--IRTNKALDYEKQQL 168
G VGR+ A D D G NA++ YS+ E DA D + K LD+E ++
Sbjct: 269 PGALVGRLRAQDPDLGDNALMAYSILDGEGAETFSISTDAQGRDGLLTIRKPLDFESRRS 328
Query: 169 YLERV 173
Y RV
Sbjct: 329 YAFRV 333
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 64/127 (50%), Gaps = 22/127 (17%)
Query: 50 EYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF 109
+Y LL D AS L+P +E I+V DIND P F PY
Sbjct: 109 QYVLLAQAVDRASNRPLEPPSEFI----------------IKVQDINDNPPVFPLGPYHA 152
Query: 110 SVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIPFV-VDANTGDIRTN-KALDY 163
+VPE + G +V +V A DAD+ G +A + Y+V + +PF VD TG +RT +D
Sbjct: 153 TVPEMSNVGTSVIQVTAQDADDPSYGNSAKLVYTVLDGLPFFSVDPQTGVVRTAIPNMDR 212
Query: 164 EKQQLYL 170
E Q+++L
Sbjct: 213 ETQEVFL 219
>gi|405950339|gb|EKC18334.1| Protocadherin-11 X-linked [Crassostrea gigas]
Length = 1053
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 84/183 (45%), Gaps = 33/183 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y A + + +GVT+ +V ATD D ++Y L ++DA S F+++ T G I
Sbjct: 458 YFASIEENNPVGVTVTKVSATDNDIDLNAQIQYVL---HSDAGSSFSINRIT---GVINA 511
Query: 79 EGGL----------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
G L + TATV + +TDIND P+F + F V E D
Sbjct: 512 TGVLDRETTSDYLFRVLAVDGGKEPKTGTATVIVNITDINDNKPKFSKSLFTFEVSELSD 571
Query: 117 GLA-VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYLER 172
VGRV A D D GQNA + YS+ ++PF V N G + T LD E Y
Sbjct: 572 PYTHVGRVTAQDPDLGQNAYLQYSMSSQDRNVPFEVSLN-GTVITRAELDREYMGQYNFM 630
Query: 173 VFL 175
V++
Sbjct: 631 VYV 633
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPE- 142
T V+I V D ND P F Y +VPE G + RV ATDAD G N + Y + +
Sbjct: 222 TLQVDINVLDDNDNPPVFGESIYNKTVPENTLPGTTILRVTATDADSGLNGELEYHISQG 281
Query: 143 ---DIPFVVDANTGDIRTNKALDYEKQQLY 169
DI F ++ TG+I K L YE +++
Sbjct: 282 AYSDI-FSINNRTGEILLLKKLVYEPNEIF 310
Score = 42.4 bits (98), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 71/169 (42%), Gaps = 31/169 (18%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------------------ATEHQG 74
+ V D D+GK G EY + ++S+F++ P A+EH
Sbjct: 368 VAHVSVEDSDTGKNG--EYVC----SISSSFFDIKPLQSKGYKVVVKIPLDREKASEHNV 421
Query: 75 PI--QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
+ D G L S+ + ++V D ND P F Y S+ E G+ V +V ATD D
Sbjct: 422 TVSCHDLGTPPLYSSVSFIVQVGDENDNKPVFLQPTYFASIEENNPVGVTVTKVSATDND 481
Query: 130 EGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
NA + Y + D F ++ TG I LD E YL RV +
Sbjct: 482 IDLNAQIQYVLHSDAGSSFSINRITGVINATGVLDRETTSDYLFRVLAV 530
>gi|402884599|ref|XP_003905765.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1-like
[Papio anubis]
Length = 1085
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 79/168 (47%), Gaps = 12/168 (7%)
Query: 7 PSALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL 66
P AL + S A HE ++ D+DS + YR+L D F L
Sbjct: 270 PDALGLRYASANPRAGPHAGHERASAVLSKSLIDRDSPVNANLRYRVLGGAWDV---FQL 326
Query: 67 DPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--AVGRVH 124
+ E G ++ G LS+TATV I V D ND P+F Y VPE GL AV RV
Sbjct: 327 N---ESSGVGRNPGPLSATATVYIEVEDENDNYPQFSEQNYVVQVPEDV-GLNTAVLRVQ 382
Query: 125 ATDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLY 169
ATD D+GQNA ++YS+ F + + +G + LD+E Q Y
Sbjct: 383 ATDRDQGQNAAIHYSILSGNVAGQFYLHSLSGILDVINPLDFEDVQKY 430
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQ-- 73
+G +++ ++A D+D+ ++ Y+L NT + LD E Q
Sbjct: 602 VGSSVLTLQARDRDANS--VITYQLTGGNTRNRFALSSQRGGGLITLALPLDYKQEQQYV 659
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G S TA V I VTD N P FQS Y SV E + G ++ + A D D G
Sbjct: 660 LAVTASDGTRSHTAHVLINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATLSANDEDTG 719
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + +P F +D ++G + T LDYE Q Y
Sbjct: 720 ENARITYVIQDPVPQFRIDPDSGTMYTMMELDYENQVAY 758
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 39/180 (21%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN--------LDP-----ATEHQGP 75
L +++V+ATD+D G+ + Y +L N Y + ++P ++
Sbjct: 374 LNTAVLRVQATDRDQGQNAAIHYSILSGNVAGQFYLHSLSGILDVINPLDFEDVQKYSLS 433
Query: 76 IQDEGG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
I+ + G ++S+ V+++V D+ND P F S P++ +V E G V + A DAD
Sbjct: 434 IKAQDGGRPPLINSSGVVSVQVLDVNDNEPIFVSSPFQATVLENVPLGYPVVHIQAVDAD 493
Query: 130 EGQNAVVYYSVPE--------------------DIPFVVDANTGDIRTNKALDYEKQQLY 169
G+NA ++Y + + D PF + ++G I LD E+ + Y
Sbjct: 494 SGENARLHYRLVDTASAFLGGGSAGPKNPAPTPDFPFQIHNSSGWITVCAELDREEVEHY 553
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
FY + +++QV ATD+DSG G + Y + ++ ++P + G I+
Sbjct: 796 FYQGSIFEDAPPSTSILQVSATDRDSGPNGRLLYTFQGGDDGDGDFY-IEPTS---GVIR 851
Query: 78 --------------------DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
D G LS++ + + + DIND P F+ E V E
Sbjct: 852 TQRRLDRENVAVYNLWALAVDRGSPTPLSASVEIQVTILDINDNAPMFEKDELELFVEEN 911
Query: 115 QD-GLAVGRVHATDADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
G V ++ A D DEG NA + Y + E D+ F +D GD+R LD+E ++ Y+
Sbjct: 912 NPVGSVVAKIRANDPDEGPNAQIMYQIVEGDMRHFFQLDLLNGDLRAMVELDFEVRREYV 971
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y + +G ++ + A D+D+G+ + Y + D F +DP +
Sbjct: 691 SSHYTVSVSEDRPVGTSIATLSANDEDTGENARITYVI----QDPVPQFRIDPDSGTMYT 746
Query: 71 ------EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E+Q QD G S T T+ I + D ND P+F Y+ S+ E
Sbjct: 747 MMELDYENQVAYTLTIMAQDNGIPQKSDTTTLEILILDANDNAPQFLWDFYQGSIFEDAP 806
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ +V ATD D G N + Y+ D F ++ +G IRT + LD E +Y
Sbjct: 807 PSTSILQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRENVAVY 864
>gi|403420604|ref|NP_001258157.1| protocadherin 11 X-linked precursor [Rattus norvegicus]
Length = 1338
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 79/174 (45%), Gaps = 26/174 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
F + + G L ++ ATD DSG+ + Y L DA FNLD T
Sbjct: 470 FISLSVPENNSPGAQLTKISATDADSGRNAEINYLL---GFDAPPEFNLDRRTGILTAVK 526
Query: 71 ----EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--QD 116
E Q QD G L S ATV + V D ND +P F Y F VPE +
Sbjct: 527 KLDREKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEYNFYVPENLPKH 586
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLY 169
G VG + TD D G+N+ V SV + + F +D +G IR N + D EKQ+ Y
Sbjct: 587 G-TVGLITVTDPDYGENSAVTLSVLDVNDQFTIDPQSGVIRPNISFDREKQESY 639
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+ ++ + I+V D ND P F SVPE G + ++ ATDAD G+NA + Y +
Sbjct: 446 LNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNSPGAQLTKISATDADSGRNAEINYLL 505
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
D P F +D TG + K LD EKQ+ Y
Sbjct: 506 GFDAPPEFNLDRRTGILTAVKKLDREKQEKY 536
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 78 DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
++GG SSTA + + V D ND P F E S+PE G +V ++HATDAD G+N
Sbjct: 222 EDGGFPQRSSTAILQVSVADTNDNRPIFIEKEIEVSIPENAPIGSSVTQLHATDADIGEN 281
Query: 134 AVVYYSVPEDIP------FVVDANTGDIRTNKALDYEK 165
A +++ + F ++ TG I + LD E+
Sbjct: 282 ARIHFYFSNLVSNNAKRLFHLNTTTGLITVKEPLDREE 319
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 60/146 (41%), Gaps = 30/146 (20%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP-- 75
FY KH T+ + TD D G+ V +LD N F +DP + P
Sbjct: 577 FYVPENLPKHG---TVGLITVTDPDYGENSAVTLSVLDVN----DQFTIDPQSGVIRPNI 629
Query: 76 -------------IQDEGG----LSSTATVNIRVTDINDKNPEFQSLP----YEFSVPEG 114
++ E G SSTA V I V D+ND P F P +E+ +P
Sbjct: 630 SFDREKQESYTFYVKAEDGGRVSRSSTAKVTINVVDVNDNKPIFIDPPSNYSFEWVLPST 689
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV 140
G + +V A D D G NA + YS+
Sbjct: 690 DPGTVIFKVLAIDNDTGMNAELRYSI 715
>gi|66346693|ref|NP_005236.2| protocadherin Fat 1 precursor [Homo sapiens]
gi|334302792|sp|Q14517.2|FAT1_HUMAN RecName: Full=Protocadherin Fat 1; AltName: Full=Cadherin family
member 7; AltName: Full=Cadherin-related tumor suppressor
homolog; AltName: Full=Protein fat homolog; Contains:
RecName: Full=Protocadherin Fat 1, nuclear form; Flags:
Precursor
Length = 4588
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 17/132 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI-- 76
L +M+VK TD DSG +G V Y ++++ Y N LD T + I
Sbjct: 2507 LHTLVMEVKTTDGDSGIYGHVTYHIVNDFAKDRFYINERGQIFTLEKLDRETPAEKVISV 2566
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEG 131
+D GG + TVN+ +TD ND P+F++ YE ++ G +V +V A+DADEG
Sbjct: 2567 RLMAKDAGGKVAFCTVNVILTDDNDNAPQFRATKYEVNIGSSAAKGTSVVKVLASDADEG 2626
Query: 132 QNAVVYYSVPED 143
NA + Y++ D
Sbjct: 2627 SNADITYAIEAD 2638
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 75/160 (46%), Gaps = 23/160 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ ATD D + Y LL + A F L+P T E Q
Sbjct: 3039 GKLIMQISATDADIRSNAEITYTLLGS---GAEKFKLNPDTGELKTSTPLDREEQAVYHL 3095
Query: 78 -----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D GG A++ + + D+ND PEF + PY +V E + G + RV ATDAD G
Sbjct: 3096 LVRATDGGGRFCQASIVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDADAG 3155
Query: 132 QNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
N + YS+ + D F ++ +G I+ K LD E Q +Y
Sbjct: 3156 LNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVY 3195
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 86/176 (48%), Gaps = 29/176 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
++ ++ DK E+ ++QV+ATDKD G G V Y ++ +TD F++D T
Sbjct: 827 YFVEVSEDK-EVHSEIIQVEATDKDLGPNGHVTYSIV-TDTDT---FSIDSVTGVVNIAR 881
Query: 71 --------EHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
EH I+ +E L ST V + + D+ND P F Y V E
Sbjct: 882 PLDRELQHEHSLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTFIPPNYRVKVREDLP 941
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
+G + + A D D GQ+ V YS+ + + F VD +G +R + LD+EK+Q+Y
Sbjct: 942 EGTVIMWLEAHDPDLGQSGQVRYSLLDHGEGNFDVDKLSGAVRIVQQLDFEKKQVY 997
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKN 99
D+ SG+ L + LD+ T F++ QD+ + ++ V+I+V D ND +
Sbjct: 2754 DRQSGRLKL--EKSLDHETTKWYQFSILARC-----TQDDHEMVASVDVSIQVKDANDNS 2806
Query: 100 PEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI------PFVVDANT 152
P F+S PYE F V G V ++ A+DAD G N V YS+ + F ++ T
Sbjct: 2807 PVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMET 2866
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G I T K LD+EK+ Y +V
Sbjct: 2867 GWITTLKELDHEKRDNYQIKV 2887
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 25/169 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--------TDAASYF---NLD 67
YGA + +G ++QV A +D + Y ++ N + + F NLD
Sbjct: 3235 YGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLD 3294
Query: 68 PATEHQGPIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--- 118
+ H+ + E GG LS ATVN+ VTDIND P F Y + E D +
Sbjct: 3295 YESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISE--DAVLEQ 3352
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
+V V A DAD N+ ++YS+ + F +D G+++ K LD E
Sbjct: 3353 SVITVMADDADGPSNSHIHYSIIDGNQGSSFTIDPVRGEVKVTKLLDRE 3401
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 75/172 (43%), Gaps = 21/172 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + E G L +V+ATD D+G + Y L+D+ S L + + P+
Sbjct: 3130 YAITVFENTEPGTLLTRVQATDADAGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDR 3189
Query: 78 -------------DEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAV 120
D+G L++T TV + V DIND P F+ Y +V E G V
Sbjct: 3190 ELQAVYTLSLKAVDQGLPRRLTATGTVIVSVLDINDNPPVFEYREYGATVSEDILVGTEV 3249
Query: 121 GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V+A D NA + YS+ E F +D+ TG + + LDYE Y
Sbjct: 3250 LQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEY 3301
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 23/160 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + +G +++QV+ATD DS + Y++ N++ + +F++D +T
Sbjct: 2288 YAVTLSEASVIGTSVVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRT 2347
Query: 71 -------EHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
+H ++ +GG LSS V + VTD+ND P F+ YE + E G
Sbjct: 2348 LDYEQSRQHTIFVRAVDGGMPTLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPHGH 2407
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
V V A DAD + YS+ + FV+D+ TG I
Sbjct: 2408 FVTCVKAYDADSSDIDKLQYSILSGNDHKHFVIDSATGII 2447
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVY 137
+G SS A V ++V D ND +P + Y ++PE G + ++ ATDAD NA +
Sbjct: 3000 DGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPEDVLPGKLIMQISATDADIRSNAEIT 3059
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ F ++ +TG+++T+ LD E+Q +Y
Sbjct: 3060 YTLLGSGAEKFKLNPDTGELKTSTPLDREEQAVY 3093
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 57/135 (42%), Gaps = 2/135 (1%)
Query: 37 KATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIN 96
KA + G F + R NT + D T ++ + + V ++V D N
Sbjct: 84 KAEEYILGDFCFLRIRTKGGNTAILNREVKDHYTLIVKALEKNTNVEARTKVRVQVLDTN 143
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGD 154
D P F Y S+PE ++ RV ATDAD G N YYS + F + +G
Sbjct: 144 DLRPLFSPTSYSVSLPENTAIRTSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGV 203
Query: 155 IRTNKALDYEKQQLY 169
I LDY + +LY
Sbjct: 204 IVLTGRLDYLETKLY 218
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE 142
++ V ++V N PEF Y+ + E G V + A D DEG+N V YS+
Sbjct: 445 ASTKVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYSIAN 504
Query: 143 --DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSY 183
+PF +D TG + T++ LDYE + RV+ + A+ +
Sbjct: 505 LNHVPFAIDHFTGAVSTSENLDYE----LMPRVYTLRIRASDW 543
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 75/173 (43%), Gaps = 36/173 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLD--------------------- 67
G ++Q++A+D DSG G V Y L + + F ++
Sbjct: 2825 GSRVIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQ 2884
Query: 68 ---PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRV 123
A++H IQ LSSTA V++ VTD+ND P F + Y+ +V E G + +
Sbjct: 2885 IKVVASDHGEKIQ----LSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSEDDPQGGVIAIL 2940
Query: 124 HATDAD-EGQNAVVYYSVPEDIP---FVVDA--NTGDIRTNKALDYEKQQLYL 170
TDAD E N V Y + P F V+ N + K LD EK+ YL
Sbjct: 2941 STTDADSEEINRQVTYFITGGDPLGQFAVETIQNEWKVYVKKPLDREKRDNYL 2993
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 69/160 (43%), Gaps = 24/160 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE-------------HQGPI--- 76
++Q+ A D+D K L+ + + F LDPAT HQ +
Sbjct: 1475 ILQISAVDQDE-KNKLIYTLQSSRDPLSLKKFRLDPATGSLYTSEKLDHEAVHQHTLTVM 1533
Query: 77 ---QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
QD + A + + V+D ND P F + Y+ V E G V +V A D D+G+
Sbjct: 1534 VRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVTALDKDKGK 1593
Query: 133 NAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
NA V YS+ F++D G I+T K LD Q Y
Sbjct: 1594 NAEVLYSIESGNIGNSFMIDPVLGSIKTAKELDRSNQAEY 1633
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 19/167 (11%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQGPIQD 78
G ++ +G +++ + +TD D+G G + Y + N D+ +++ + P+
Sbjct: 723 GIQVKENQPVGSSVIFMNSTDLDTGFNGKLVYAVSGGNEDSCFMIDMETGMLKILSPLDR 782
Query: 79 EG-------------GLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VG 121
E G+ A +++ V D ND PEF Y V E ++ + +
Sbjct: 783 ETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSEDKEVHSEII 842
Query: 122 RVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQ 167
+V ATD D G N V YS+ D F +D+ TG + + LD E Q
Sbjct: 843 QVEATDKDLGPNGHVTYSIVTDTDTFSIDSVTGVVNIARPLDRELQH 889
Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 11/101 (10%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR--------VHATDADEG 131
GLS+ TV + + D ND P F Y + E +V + A DAD+
Sbjct: 1743 AGLSTNTTVLVHLQDENDNAPVFMQAEYTGLISESASINSVVLTDRNVPLVIRAADADKD 1802
Query: 132 QNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
NA++ Y + E F +D++TG I T +LDYE+ ++
Sbjct: 1803 SNALLVYHIVEPSVHTYFAIDSSTGAIHTVLSLDYEETSIF 1843
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 34/178 (19%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-- 70
TS+ ++Y + + + V+++Q++A D DS + Y++ N +F++ P T
Sbjct: 1139 TSEPVYYPEIMENSPK-DVSVVQIEAFDPDSSSNDKLMYKITSGNPQG--FFSIHPKTGL 1195
Query: 71 --------------EH--QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH + + D G S+ A V +++ D ND P+F Y+ +P
Sbjct: 1196 ITTTSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLP 1255
Query: 113 EGQ--DGLAVGR------VHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNK 159
E + D R V ATD DEG NA + YS+ E F ++ TG + + +
Sbjct: 1256 EREKPDRERNARREPLYHVIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTGVVSSKR 1313
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 74/176 (42%), Gaps = 34/176 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + +G ++QV A DKD GK V Y + N + F +DP G I+
Sbjct: 1567 YKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSIESGNI--GNSFMIDPVL---GSIKT 1621
Query: 78 -------------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
D+G +S +V I VT ++ +P+F S Y + E
Sbjct: 1622 AKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASPKFTSKEYSVELSETVS 1681
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
G VG V A Q++VVY + F ++ ++G I T KALD+E +Y
Sbjct: 1682 IGSFVGMVTA----HSQSSVVYEIKDGNTGDAFDINPHSGTIITQKALDFETLPIY 1733
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 34/178 (19%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
+L Y A+ + E+G + V A D+DSG+ G V Y L +++ +F + P E
Sbjct: 2083 NLPYYAVVKVDTEVGHVIRYVTAVDRDSGRNGEVHYYLKEHH----EHFQIGPLGEISLK 2138
Query: 76 IQ-----------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
Q D G + +A V + +T +N P F+ Y + E
Sbjct: 2139 KQFELDTLNKEYLVTVVAKDGGNPAFSAEVIVPITVMNKAMPVFEKPFYSAEIAESI--- 2195
Query: 119 AVGRVHA----TDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+VH+ A+ + V+YS+ + P F ++ NTG I LD+E Y
Sbjct: 2196 ---QVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAPLDFEAHPAY 2250
Score = 39.7 bits (91), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G + V+I V DIND P F Y ++ E G +V +V ATD+D N + Y
Sbjct: 2262 GAHAEVFVDIIVDDINDNPPVFAQQSYAVTLSEASVIGTSVVQVRATDSDSEPNRGISYQ 2321
Query: 140 V-----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ F VD++TG I + LDYE+ + +
Sbjct: 2322 MFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQH 2356
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVY 137
+G + V I+V D ND P+F + YE +PE + ++ A D DE +N ++Y
Sbjct: 1433 DGTTTILTQVFIKVIDTNDHRPQFSTSKYEVVIPEDTAPETEILQISAVDQDE-KNKLIY 1491
Query: 138 YSVPEDIP-----FVVDANTGDIRTNKALDYE 164
P F +D TG + T++ LD+E
Sbjct: 1492 TLQSSRDPLSLKKFRLDPATGSLYTSEKLDHE 1523
>gi|410948519|ref|XP_003980982.1| PREDICTED: protocadherin gamma-A11 [Felis catus]
Length = 827
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 72/163 (44%), Gaps = 25/163 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------------- 70
G ++ V ATD D G G V + + + A+ F LD T
Sbjct: 258 GTRVLMVNATDPDEGINGEVVFSFRNMESKASEIFQLDSQTGEVLIRGSLDFEKSRFYEM 317
Query: 71 EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
E QG QD GGLS+TA + I V D+ND PE SV E G + ++ D D
Sbjct: 318 EIQG--QDGGGLSTTAKILITVVDVNDNAPEITITSSTNSVLENSPPGTVIALLNVQDQD 375
Query: 130 EGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
G+N V VP +PF ++ G+ + TN+ LD E+ Y
Sbjct: 376 SGENGQVSCFVPNSLPFKLEKTYGNYYKLITNRVLDREQVHSY 418
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
Query: 54 LDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
LD +AA + L A + PIQ T + + V D+ND P+F Y+ S+PE
Sbjct: 200 LDREKEAAHHLLLT-AFDGGDPIQQ-----GTVAIRVVVLDVNDHIPKFTQSVYQVSIPE 253
Query: 114 G-QDGLAVGRVHATDADEGQNAVVYYSV------PEDIPFVVDANTGDIRTNKALDYEKQ 166
G V V+ATD DEG N V +S +I F +D+ TG++ +LD+EK
Sbjct: 254 NLSSGTRVLMVNATDPDEGINGEVVFSFRNMESKASEI-FQLDSQTGEVLIRGSLDFEKS 312
Query: 167 QLY 169
+ Y
Sbjct: 313 RFY 315
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 77/177 (43%), Gaps = 36/177 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA---SYFNLDPATEHQGPIQD-------- 78
G + V A D DS + V Y L+++ A SY +++ T ++
Sbjct: 468 GASFFSVMALDLDSNENSRVTYSLVEDTLQGAPLSSYVSINSDTGTLYALRSFDYEQFRD 527
Query: 79 --------EGG---LSSTATVNIRVTDINDKNPEF--QSLP------YEFSVPEGQDGLA 119
+GG LSS +V+I V D ND PE +LP E + + G
Sbjct: 528 LQVWVTALDGGNPPLSSNVSVSIFVLDQNDNVPEILHPTLPTDGSTGVELAPRSAEPGYL 587
Query: 120 VGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL---DYEKQQLYL 170
V +V A D D GQNA + Y + E F V +TG++RT +AL D KQ L +
Sbjct: 588 VTKVVAVDRDSGQNAWLSYRLLKASEPGLFTVGLHTGEVRTARALLDRDALKQSLVV 644
Score = 39.3 bits (90), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 15/129 (11%)
Query: 46 FGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSL 105
+ L+ R+LD + +N+ QG LS+ +++ V D ND P F
Sbjct: 402 YKLITNRVLDR--EQVHSYNITLIATDQG----HPPLSTETHISLNVADDNDNPPTFADS 455
Query: 106 PYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDI----PF----VVDANTGDIR 156
Y +PE G + V A D D +N+ V YS+ ED P ++++TG +
Sbjct: 456 SYSVYIPENNPRGASFFSVMALDLDSNENSRVTYSLVEDTLQGAPLSSYVSINSDTGTLY 515
Query: 157 TNKALDYEK 165
++ DYE+
Sbjct: 516 ALRSFDYEQ 524
>gi|119625020|gb|EAX04615.1| FAT tumor suppressor homolog 1 (Drosophila), isoform CRA_b [Homo
sapiens]
Length = 3841
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 17/132 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI-- 76
L +M+VK TD DSG +G V Y ++++ Y N LD T + I
Sbjct: 2510 LHTLVMEVKTTDGDSGIYGHVTYHIVNDFAKDRFYINERGQIFTLEKLDRETPAEKVISV 2569
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEG 131
+D GG + TVN+ +TD ND P+F++ YE ++ G +V +V A+DADEG
Sbjct: 2570 RLMAKDAGGKVAFCTVNVILTDDNDNAPQFRATKYEVNIGSSAAKGTSVVKVLASDADEG 2629
Query: 132 QNAVVYYSVPED 143
NA + Y++ D
Sbjct: 2630 SNADITYAIEAD 2641
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 75/160 (46%), Gaps = 23/160 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ ATD D + Y LL + A F L+P T E Q
Sbjct: 3042 GKLIMQISATDADIRSNAEITYTLLGS---GAEKFKLNPDTGELKTSTPLDREEQAVYHL 3098
Query: 78 -----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D GG A++ + + D+ND PEF + PY +V E + G + RV ATDAD G
Sbjct: 3099 LVRATDGGGRFCQASIVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDADAG 3158
Query: 132 QNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
N + YS+ + D F ++ +G I+ K LD E Q +Y
Sbjct: 3159 LNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVY 3198
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 29/176 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
++ ++ DK E+ ++QV+ATDKD G G V Y +L +TD F++D T
Sbjct: 827 YFVEVSEDK-EVHSEIIQVEATDKDLGPNGHVTYSIL-TDTDT---FSIDSVTGVVNIAR 881
Query: 71 --------EHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
EH I+ +E L ST V + + D+ND P F Y V E
Sbjct: 882 PLDRELQHEHSLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTFIPPNYRVKVREDLP 941
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
+G + + A D D GQ+ V YS+ + + F VD +G +R + LD+EK+Q+Y
Sbjct: 942 EGTVIMWLEAHDPDLGQSGQVRYSLLDHGEGNFDVDKLSGAVRIVQQLDFEKKQVY 997
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKN 99
D+ SG+ L + LD+ T F++ QD+ + ++ V+I+V D ND +
Sbjct: 2757 DRQSGRLKL--EKSLDHETTKWYQFSILARC-----TQDDHEMVASVDVSIQVKDANDNS 2809
Query: 100 PEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI------PFVVDANT 152
P F+S PYE F V G V ++ A+DAD G N V YS+ + F ++ T
Sbjct: 2810 PVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMET 2869
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G I T K LD+EK+ Y +V
Sbjct: 2870 GWITTLKELDHEKRDNYQIKV 2890
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 25/169 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--------TDAASYF---NLD 67
YGA + +G ++QV A +D + Y ++ N + + F NLD
Sbjct: 3238 YGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLD 3297
Query: 68 PATEHQGPIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--- 118
+ H+ + E GG LS ATVN+ VTDIND P F Y + E D +
Sbjct: 3298 YESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISE--DAVLEQ 3355
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
+V V A DAD N+ ++YS+ + F +D G+++ K LD E
Sbjct: 3356 SVITVMADDADGPSNSHIHYSIIDGNQGSSFTIDPVRGEVKVTKLLDRE 3404
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 75/172 (43%), Gaps = 21/172 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + E G L +V+ATD D+G + Y L+D+ S L + + P+
Sbjct: 3133 YAITVFENTEPGTLLTRVQATDADAGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDR 3192
Query: 78 -------------DEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAV 120
D+G L++T TV + V DIND P F+ Y +V E G V
Sbjct: 3193 ELQAVYTLSLKAVDQGLPRRLTATGTVIVSVLDINDNPPVFEYREYGATVSEDILVGTEV 3252
Query: 121 GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V+A D NA + YS+ E F +D+ TG + + LDYE Y
Sbjct: 3253 LQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEY 3304
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 23/160 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + +G +++QV+ATD DS + Y++ N++ + +F++D +T
Sbjct: 2291 YAVTLSEASVIGTSVVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRT 2350
Query: 71 -------EHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
+H ++ +GG LSS V + VTD+ND P F+ YE + E G
Sbjct: 2351 LDYEQSRQHTIFVRAVDGGMPTLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPHGH 2410
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
V V A DAD + YS+ + FV+D+ TG I
Sbjct: 2411 FVTCVKAYDADSSDIDKLQYSILSGNDHKHFVIDSATGII 2450
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVY 137
+G SS A V ++V D ND +P + Y ++PE G + ++ ATDAD NA +
Sbjct: 3003 DGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPEDVLPGKLIMQISATDADIRSNAEIT 3062
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ F ++ +TG+++T+ LD E+Q +Y
Sbjct: 3063 YTLLGSGAEKFKLNPDTGELKTSTPLDREEQAVY 3096
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 57/135 (42%), Gaps = 2/135 (1%)
Query: 37 KATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIN 96
KA + G F + R NT + D T ++ + + V ++V D N
Sbjct: 84 KAEEYILGDFCFLRIRTKGGNTAILNREVKDHYTLIVKALEKNTNVEARTKVRVQVLDTN 143
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGD 154
D P F Y S+PE ++ RV ATDAD G N YYS + F + +G
Sbjct: 144 DLRPLFSPTSYSVSLPENTAIRTSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGV 203
Query: 155 IRTNKALDYEKQQLY 169
I LDY + +LY
Sbjct: 204 IVLTGRLDYLETKLY 218
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 75/173 (43%), Gaps = 36/173 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLD--------------------- 67
G ++Q++A+D DSG G V Y L + + F ++
Sbjct: 2828 GSRVIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQ 2887
Query: 68 ---PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRV 123
A++H IQ LSSTA V++ VTD+ND P F + Y+ +V E G + +
Sbjct: 2888 IKVVASDHGEKIQ----LSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSEDDPQGGVIAIL 2943
Query: 124 HATDAD-EGQNAVVYYSVPEDIP---FVVDA--NTGDIRTNKALDYEKQQLYL 170
TDAD E N V Y + P F V+ N + K LD EK+ YL
Sbjct: 2944 STTDADSEEINRQVTYFITGGDPLGQFAVETIQNEWKVYVKKPLDREKRDNYL 2996
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE 142
++ V ++V N PEF Y+ + E G V + A D DEG+N V YS+
Sbjct: 445 ASTKVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYSIAN 504
Query: 143 --DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSY 183
+PF +D TG + T++ LDYE + RV+ + A+ +
Sbjct: 505 LNHVPFAIDHFTGAVSTSENLDYE----LMPRVYTLRIRASDW 543
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 69/163 (42%), Gaps = 27/163 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE-------------HQGPI--- 76
++Q+ A D+D K L+ + + F LDPAT HQ +
Sbjct: 1475 ILQISAVDQDE-KNKLIYTLQSSRDPLSLKKFRLDPATGSLYTSEKLDHEAVHQHTLTVM 1533
Query: 77 ---QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
QD + A + + V+D ND P F + Y+ V E G V +V A D D+G+
Sbjct: 1534 VRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVTALDKDKGK 1593
Query: 133 NAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEKQQLY 169
NA V YS+ F++D G I+T K LD Q Y
Sbjct: 1594 NAEVLYSIESGTFGNIGNSFMIDPVLGSIKTAKELDRSNQAEY 1636
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 19/167 (11%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQGPIQD 78
G ++ +G +++ + +TD D+G G + Y + N D+ +++ + P+
Sbjct: 723 GIQVKENQPVGSSVIFMNSTDLDTGFNGKLVYAVSGGNEDSCFMIDMETGMLKILSPLDR 782
Query: 79 EG-------------GLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VG 121
E G+ A +++ V D ND PEF Y V E ++ + +
Sbjct: 783 ETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSEDKEVHSEII 842
Query: 122 RVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQ 167
+V ATD D G N V YS+ D F +D+ TG + + LD E Q
Sbjct: 843 QVEATDKDLGPNGHVTYSILTDTDTFSIDSVTGVVNIARPLDRELQH 889
Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 11/101 (10%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR--------VHATDADEG 131
GLS+ TV + + D ND P F Y + E +V + A DAD+
Sbjct: 1746 AGLSTNTTVLVHLQDENDNAPVFMQAEYTGLISESASINSVVLTDRNVPLVIRAADADKD 1805
Query: 132 QNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
NA++ Y + E F +D++TG I T +LDYE+ ++
Sbjct: 1806 SNALLVYHIVEPSVHTYFAIDSSTGAIHTVLSLDYEETSIF 1846
Score = 42.7 bits (99), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 34/178 (19%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-- 70
TS+ ++Y + + + V+++Q++A D DS + Y++ N +F++ P T
Sbjct: 1139 TSEPVYYPEIMENSPK-DVSVVQIEAFDPDSSSNDKLMYKITSGNPQG--FFSIHPKTGL 1195
Query: 71 --------------EH--QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH + + D G S+ A V +++ D ND P+F Y+ +P
Sbjct: 1196 ITTTSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLP 1255
Query: 113 EGQ--DGLAVGR------VHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNK 159
E + D R V ATD DEG NA + YS+ E F ++ TG + + +
Sbjct: 1256 EREKPDRERNARREPLYHVIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTGVVSSKR 1313
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 34/178 (19%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
+L Y A+ + E+G + V A D+DSG+ G V Y L +++ +F + P E
Sbjct: 2086 NLPYYAVVKVDTEVGHVIRYVTAVDRDSGRNGEVHYYLKEHH----EHFQIGPLGEISLK 2141
Query: 76 IQ-----------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
Q D G + +A V + +T +N P F+ Y + E
Sbjct: 2142 KQFELDTLNKEYLVTVVAKDGGNPAFSAEVIVPITVMNKAMPVFEKPFYSAEIAESI--- 2198
Query: 119 AVGRVHA----TDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+VH+ A+ + V+YS+ + P F ++ NTG I LD+E Y
Sbjct: 2199 ---QVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAPLDFEAHPAY 2253
Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G + V+I V DIND P F Y ++ E G +V +V ATD+D N + Y
Sbjct: 2265 GAHAEVFVDIIVDDINDNPPVFAQQSYAVTLSEASVIGTSVVQVRATDSDSEPNRGISYQ 2324
Query: 140 V-----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ F VD++TG I + LDYE+ + +
Sbjct: 2325 MFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQH 2359
Score = 38.9 bits (89), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 73/185 (39%), Gaps = 49/185 (26%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN-TDAASYFNLDPATEHQGPIQ 77
Y + +G ++QV A DKD GK V Y + + + F +DP G I+
Sbjct: 1567 YKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSIESGTFGNIGNSFMIDPVL---GSIK 1623
Query: 78 --------------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
D+G +S +V I VT ++ +P+F S Y + E
Sbjct: 1624 TAKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASPKFTSKEYSVELSETV 1683
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD----------IRTNKALDYE 164
G VG V A Q++VVY + D NTGD I T KALD+E
Sbjct: 1684 SIGSFVGMVTA----HSQSSVVYE--------IKDGNTGDAFDINPHSGTIITQKALDFE 1731
Query: 165 KQQLY 169
+Y
Sbjct: 1732 TLPIY 1736
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVY 137
+G + V I+V D ND P+F + YE +PE + ++ A D DE +N ++Y
Sbjct: 1433 DGTTTILTQVFIKVIDTNDHRPQFSTSKYEVVIPEDTAPETEILQISAVDQDE-KNKLIY 1491
Query: 138 YSVPEDIP-----FVVDANTGDIRTNKALDYE 164
P F +D TG + T++ LD+E
Sbjct: 1492 TLQSSRDPLSLKKFRLDPATGSLYTSEKLDHE 1523
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 30/171 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDN---------------------NTDAASYFNLD 67
+G +M V A D+D+G+ G + Y + D + ++ S++ L
Sbjct: 1049 VGSLVMTVSAHDEDAGRDGEIRYSIRDGSGVGVFKIGEETGVIETSDRLDRESTSHYWLT 1108
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
QG + LSS + I V D+ND P+ Y + E ++V ++ A
Sbjct: 1109 VFATDQGVVP----LSSFIEIYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAF 1164
Query: 127 DADEGQNAVVYYSVPEDIP---FVVDANTGDI-RTNKALDYEKQQLYLERV 173
D D N + Y + P F + TG I T++ LD E+Q ++ V
Sbjct: 1165 DPDSSSNDKLMYKITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILEV 1215
Score = 35.8 bits (81), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 32/169 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYF-NLD- 67
Y A + +G T+M + A D D G+ G V Y + +D+ T A S NLD
Sbjct: 468 YKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYSIANLNHVPFAIDHFTGAVSTSENLDY 527
Query: 68 -----------PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
A++ P + E + +T T+N ++ND P F+ + E ++P
Sbjct: 528 ELMPRVYTLRIRASDWGLPYRREVEVLATITLN----NLNDNTPLFEKINCEGTIPRDLG 583
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKAL 161
G + V A DADE Q +V Y + E F ++ N+G + ++L
Sbjct: 584 VGEQITTVSAIDADELQ--LVQYQIEAGNELDLFSLNPNSGVLSLKRSL 630
>gi|34534729|dbj|BAC87093.1| unnamed protein product [Homo sapiens]
Length = 1366
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 75/164 (45%), Gaps = 30/164 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN--NTDAASYFNLDPATEHQGPI 76
Y A + +G +QV A+D DSG +G +EY L D + +A F +DP H G I
Sbjct: 668 YNATIAEHAPVGHCFLQVTASDADSGLYGFIEYSLYDGFLSYEAPQAFRIDP---HDGQI 724
Query: 77 ---------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EG 114
+D GGLS+ A V + + D+ND +P F Y S+ E
Sbjct: 725 CVSQDIDRERDPATYDLLVEAKDGGGLSAQAFVRVDLEDVNDNHPVFNPSTYVTSISDET 784
Query: 115 QDGLAVGRVHATDADEGQNAVVYYS-VPEDIP--FVVDANTGDI 155
Q G + V ATD D G V Y +P ++ F +D+ TG I
Sbjct: 785 QPGTEIINVLATDQDSGIYGTVAYELIPGNVSSLFTIDSTTGII 828
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 60/130 (46%), Gaps = 28/130 (21%)
Query: 35 QVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP------IQ 77
++ A D DSGK G + Y LL + +F ++P T EH+G +
Sbjct: 1212 KITAIDMDSGKNGQLLYFLLSD----GKFFKMNPNTGELINWVALDREHRGHHEMTVLVT 1267
Query: 78 DEGGLSSTAT--VNIRVTDINDKNPEF-QSLP---YEFSVPEGQD-GLAVGRVHATDADE 130
D G AT V + VTDIND P F Q LP V EGQ + V V A D DE
Sbjct: 1268 DRGSPPRNATMAVYVSVTDINDNRPFFPQCLPGKELHVKVLEGQPVNMLVTTVFAKDPDE 1327
Query: 131 GQNAVVYYSV 140
G NA V YSV
Sbjct: 1328 GNNAEVTYSV 1337
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 69/170 (40%), Gaps = 36/170 (21%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-------- 76
D+ + G ++ V ATD+DSG +G V Y L+ N +S F +D T G I
Sbjct: 782 DETQPGTEIINVLATDQDSGIYGTVAYELIPGNV--SSLFTIDSTT---GIIYLTLPLSH 836
Query: 77 ------------QDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEF----SVPEGQDGL 118
QD GGL++ A V I + EF+ Y F VPE
Sbjct: 837 LESTTLLLMVSAQDGGGLTAVINADVTIHIFQTTLAPAEFERPKYTFLVYEDVPEDS--- 893
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQ 166
+G V A + + Y D+ F + G IRT K LD+E Q
Sbjct: 894 PIGTVKAREPLNSSEPIFYRISSGDLGGKFSIHPRLGTIRTRKPLDHETQ 943
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 45/99 (45%), Gaps = 16/99 (16%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV-PEDI 144
+V +RV D ND P F+ Y +V E Q G V RV ATD D G N V YSV +
Sbjct: 281 SVELRVLDENDNPPVFEQDEYRAAVREDAQPGAEVCRVRATDRDLGPNGFVRYSVRARQV 340
Query: 145 P--------------FVVDANTGDIRTNKALDYEKQQLY 169
P F V+ +G +R + LD E Q +
Sbjct: 341 PGAGSGGGALGDAAYFAVEELSGVVRVWRPLDREAQAWH 379
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 51/109 (46%), Gaps = 23/109 (21%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQN------- 133
LS+ T+ +RV D+ND+ P F Y+ SV E G V V A+DADE +
Sbjct: 519 LSTEETLLLRVADLNDQPPLFSQQHYKASVSEAAAPGTVVMWVSASDADEAGSDHAWLRY 578
Query: 134 AVVYYSVPEDI---------------PFVVDANTGDIRTNKALDYEKQQ 167
VV S P ++ F +D+ +G I T +ALD E Q+
Sbjct: 579 TVVQLSAPCNLGSLESKMVHTAECGPSFAIDSESGVISTIRALDREVQE 627
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPE 142
S+ VNI V D+ND +P F E + + G A+ A D D G+N ++ YS+
Sbjct: 961 SSTEVNITVMDVNDNHPAFLRTSDEIRISQTTPPGTALYLARAEDRDSGRNGLIRYSIAS 1020
Query: 143 DIP--FVVDANTGDIRTNKALDYEKQQ 167
P F +D G + N +L +Q+
Sbjct: 1021 PQPGVFAIDRALGVLFLNGSLGAGEQR 1047
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 76 IQDEGGLSSTAT-VNIRVTDINDKNPEFQS----LPYEFS-VPEGQDGLAVGRVHATDAD 129
I ++G L + +T V +RV D ND +P F L E S VP+G +G++ A D D
Sbjct: 1164 IPEDGFLQNVSTTVIVRVWDENDNSPTFLHDVLFLKVEESPVPQG----VIGKITAIDMD 1219
Query: 130 EGQNA-VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQ 166
G+N ++Y+ + + F ++ NTG++ ALD E +
Sbjct: 1220 SGKNGQLLYFLLSDGKFFKMNPNTGELINWVALDREHR 1257
>gi|344238296|gb|EGV94399.1| Protocadherin-3 [Cricetulus griseus]
Length = 840
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 22/174 (12%)
Query: 9 ALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP 68
A TS +LF ++ + + + + ATD DSG + Y LL + DP
Sbjct: 415 AFTQTSYTLF----VQENNSPALHIGTISATDSDSGSNAHITYSLLPTH---------DP 461
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
I L++ T+ +RV+D+ND P F Y V E L +G + ATD
Sbjct: 462 QLALSSLISINALLTTQHTITVRVSDVNDNAPAFTQTSYTLFVQENNSPALHIGTISATD 521
Query: 128 ADEGQNAVVYYS-VPEDIP-------FVVDANTGDIRTNKALDYEKQQLYLERV 173
+D G NA + YS +P P ++A+ G + +ALDYE Q + RV
Sbjct: 522 SDSGSNAHITYSLLPTHDPQLALSSLISINADNGQLFALRALDYEALQTFEFRV 575
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ--DGLAVGRVHATDADEGQNAVVYYSV 140
S T TV I V DIND P+F YE VPE D L + V A D D G + V YS+
Sbjct: 189 SGTTTVRIEVVDINDNAPQFVQSLYEVQVPENSPVDALVL-TVSAMDLDAGIHGNVVYSL 247
Query: 141 PE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+ PF + TG+IR +K LD+E Y
Sbjct: 248 FQGGGASQPFAIHGVTGEIRLSKELDFEVTNHY 280
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 81/197 (41%), Gaps = 39/197 (19%)
Query: 9 ALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN------------ 56
A TS +LF ++ + + + + ATD DSG + Y LL
Sbjct: 494 AFTQTSYTLF----VQENNSPALHIGTISATDSDSGSNAHITYSLLPTHDPQLALSSLIS 549
Query: 57 -NTDAASYFNLDP-------ATEHQGPIQDEG--GLSSTATVNIRVTDINDKNP------ 100
N D F L E + D+G LSS A V + V D ND P
Sbjct: 550 INADNGQLFALRALDYEALQTFEFRVGATDQGSPALSSQALVRVLVLDANDNAPFVLYPL 609
Query: 101 EFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIR 156
+ S P+ +P + G V +V A D D GQNA + + + E F V A+ G++R
Sbjct: 610 QNASAPFTELLPRAAEPGYLVTKVVAVDRDSGQNAWLSFQLLKATEPGLFTVWAHNGEVR 669
Query: 157 TNKAL---DYEKQQLYL 170
T++ L D K +L L
Sbjct: 670 TSRLLSERDAPKHRLLL 686
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 61/162 (37%), Gaps = 31/162 (19%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDN----------------------NTDAASYFNLDPAT 70
++ V A D D+G G V Y L + + +++N++ A
Sbjct: 227 VLTVSAMDLDAGIHGNVVYSLFQGGGASQPFAIHGVTGEIRLSKELDFEVTNHYNIEIAA 286
Query: 71 EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADE 130
D GG S V ++V D+ND PE +PE V +D D
Sbjct: 287 ------TDGGGFSGKCNVAVQVLDVNDNAPELTIRKLTSPIPENSLETVVAVFSVSDPDS 340
Query: 131 GQNAVVYYSVPEDIPFVVD---ANTGDIRTNKALDYEKQQLY 169
G N V S+ D+PF++ N + T LD E + Y
Sbjct: 341 GDNGRVVCSIQNDLPFLLKPTFKNYYTLVTEGPLDRESRAEY 382
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L++ T+ ++V+D+ND P F Y V E L +G + ATD+D G NA + YS+
Sbjct: 396 LTAQHTITVQVSDVNDNAPAFTQTSYTLFVQENNSPALHIGTISATDSDSGSNAHITYSL 455
Score = 42.7 bits (99), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 89 NIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDIPF- 146
++++TDIND +PEF +PE Q G A D+D G NAV Y+V ++ F
Sbjct: 86 DLQLTDINDHSPEFPHKEMLLKIPESAQPGTVFPLKAAQDSDIGNNAVQNYTVSSNLHFH 145
Query: 147 VVDANTGDIRT------NKALDYEKQ 166
VV + D R ++ALD E+Q
Sbjct: 146 VVTLSRADGRKYPELVLDRALDREEQ 171
>gi|224065038|ref|XP_002191313.1| PREDICTED: cadherin-11 [Taeniopygia guttata]
Length = 792
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 87/185 (47%), Gaps = 31/185 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A ++ +G +++QV A+D D +G +L+ + + YF+++ T
Sbjct: 164 YHANVPERSNVGTSVIQVTASDADDPTYG-NSAKLVYSILEGQPYFSVEAQTGIIRTALP 222
Query: 71 --------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ- 115
E+ IQ + GGLS T V I +TD+ND P+F Y+ SV E
Sbjct: 223 NMDREAKEEYHVVIQAKDMGGHMGGLSGTTKVTITLTDVNDNPPKFPQSVYQMSVSEAAV 282
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQL 168
G VGRV A D D G+N +V YS+ + +I + G ++ K LDYE ++
Sbjct: 283 PGEEVGRVKAKDPDIGENGLVAYSIIDGDGMDMFEITTDYETQEGVVKLKKTLDYESKKS 342
Query: 169 YLERV 173
Y +V
Sbjct: 343 YSLKV 347
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 79/186 (42%), Gaps = 47/186 (25%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNN--------TD---------------------- 59
G + +VKA D D G+ GLV Y ++D + TD
Sbjct: 284 GEEVGRVKAKDPDIGENGLVAYSIIDGDGMDMFEITTDYETQEGVVKLKKTLDYESKKSY 343
Query: 60 ----AASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-G 114
A+ ++DP GP +D T TV I V D D+ P F Y F V E
Sbjct: 344 SLKVEAANVHIDPKFISNGPFKD------TVTVKITVEDA-DEPPVFLKPSYIFEVQENA 396
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLYL 170
G VG+VHA D D N+ + YS+ FV++A G+I+T KALD E+ +
Sbjct: 397 ASGTVVGKVHAKDPD-AANSALRYSIDRHTDLERYFVINAEDGNIKTIKALDREEMAWHN 455
Query: 171 ERVFLI 176
VF +
Sbjct: 456 ISVFAV 461
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
++V DIND PEF Y +VPE + G +V +V A+DAD+ G +A + YS+ E P
Sbjct: 147 VKVQDINDNPPEFLHENYHANVPERSNVGTSVIQVTASDADDPTYGNSAKLVYSILEGQP 206
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLY 169
F V+A TG IRT +D E ++ Y
Sbjct: 207 YFSVEAQTGIIRTALPNMDREAKEEY 232
>gi|392341624|ref|XP_001078424.3| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Rattus
norvegicus]
gi|392349660|ref|XP_001070474.3| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Rattus
norvegicus]
Length = 3075
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 84/180 (46%), Gaps = 28/180 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y R+ E+G ++ ++ATD D+ + YRLL+ A F +D
Sbjct: 373 YRERIRENLEVGYEVLTIRATDGDAPSNANMRYRLLEG---AGGVFEIDARSGVVRTRAV 429
Query: 69 -----ATEHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QD 116
A E+Q ++ + G LS++ATV+I V D ND P+F Y VPE
Sbjct: 430 VDREEAAEYQLLVEANDQGRNPGPLSASATVHIVVEDENDNYPQFSEKRYVVQVPEDVAV 489
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V RV ATD D+GQNA ++YS+ F + + +G + LD+E + Y R+
Sbjct: 490 NTPVLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLRI 549
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 76/159 (47%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQ-- 73
+G +++ ++A D+D+ ++ Y+L NT + LD E Q
Sbjct: 717 VGSSVLTLRARDRDANS--VITYQLTGGNTRNRFALSSQSGGGLITLALPLDYKQERQYV 774
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G S TA V I VTD N P FQS Y SV E + G ++ + ATD D G
Sbjct: 775 LAVTASDGTRSHTAQVFINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATISATDEDTG 834
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + +P F +D +TG I T LDYE Q Y
Sbjct: 835 ENARITYVLEDPVPQFRIDPDTGTIYTMTELDYEDQAAY 873
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 79/181 (43%), Gaps = 33/181 (18%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEY------------------------RL 53
FY + +++QV ATD+DSG G + Y R
Sbjct: 911 FYQGSVFEDAPPSTSVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRR 970
Query: 54 LDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
LD A +NL +G + LS++ V + V DIND P F+ E V E
Sbjct: 971 LDRENVAV--YNLWALAVDRG---NPNPLSASVEVQVTVLDINDNPPVFEKDELELFVEE 1025
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLY 169
G V R+ A D DEG NA + Y + E ++P F +D +GD+R LD+E ++ Y
Sbjct: 1026 NSPVGSVVARIRANDPDEGPNAQIMYQIVEGNVPEVFQLDLLSGDLRALVELDFEVRRDY 1085
Query: 170 L 170
+
Sbjct: 1086 M 1086
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 77/176 (43%), Gaps = 39/176 (22%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQGPIQDE 79
+++V+ATD+D G+ + Y ++ N Y + + E+ I+ +
Sbjct: 493 VLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLRIKAQ 552
Query: 80 GG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
G ++S+ V+++V D+ND P F S P++ +V E G +V + A DAD G+N
Sbjct: 553 DGGRPPLINSSGLVSVQVLDVNDNAPIFVSSPFQAAVLENVPLGHSVLHIQAVDADAGEN 612
Query: 134 AVVYYSVPE--------------------DIPFVVDANTGDIRTNKALDYEKQQLY 169
A + Y + + D PF + ++G I LD E + Y
Sbjct: 613 ARLQYRLVDTASTILGGSSIDSENPVSAPDFPFQIHNSSGWITVCAELDRELLEHY 668
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 74/178 (41%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y + +G ++ + ATD+D+G+ + Y L D F +DP T
Sbjct: 806 SSHYTVSVSEDRPVGTSIATISATDEDTGENARITYVL----EDPVPQFRIDPDTGTIYT 861
Query: 71 ------EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E Q QD G S T ++ I + D ND P F Y+ SV E
Sbjct: 862 MTELDYEDQAAYTLAITAQDNGIPQKSDTTSLEILILDANDNAPRFLRDFYQGSVFEDAP 921
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V +V ATD D G N + Y+ D F ++ +G IRT + LD E +Y
Sbjct: 922 PSTSVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRENVAVY 979
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 37/170 (21%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPAT---------------- 70
G +++++A D D G+ G + Y+ L D ++ YF +D T
Sbjct: 276 GTAVIELRAHDPDEGEAGRLSYQMEALFDERSNG--YFLIDATTGAVTTARALDRETKDT 333
Query: 71 --------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
+H P + S+ + + V+D ND +P F+ Y + E + G V
Sbjct: 334 HVLKVSAVDHGSPRR-----SAATYLTVTVSDTNDHSPVFEQSEYRERIRENLEVGYEVL 388
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+ ATD D NA + Y + E F +DA +G +RT +D E+ Y
Sbjct: 389 TIRATDGDAPSNANMRYRLLEGAGGVFEIDARSGVVRTRAVVDREEAAEY 438
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 99 NPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP------EDIPFVVDAN 151
+P+F Y+ SVPE + G AV + A D DEG+ + Y + + F++DA
Sbjct: 257 SPQFPLPSYQVSVPENEPAGTAVIELRAHDPDEGEAGRLSYQMEALFDERSNGYFLIDAT 316
Query: 152 TGDIRTNKALDYEKQQLYLERV 173
TG + T +ALD E + ++ +V
Sbjct: 317 TGAVTTARALDRETKDTHVLKV 338
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 76/182 (41%), Gaps = 42/182 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD---PATEHQGPIQ-------- 77
LG +++ ++A D D+G+ ++YRL+D + ++D P + P Q
Sbjct: 595 LGHSVLHIQAVDADAGENARLQYRLVDTASTILGGSSIDSENPVSAPDFPFQIHNSSGWI 654
Query: 78 ---------------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
D G +SS+A+V+I V D+ND +P F YE + E
Sbjct: 655 TVCAELDRELLEHYSFGVEAVDHGSPPMSSSASVSITVLDVNDNDPVFTQPVYELRLNED 714
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQL 168
G +V + A D D N+V+ Y + + G I LDY++++
Sbjct: 715 AAVGSSVLTLRARDRD--ANSVITYQLTGGNTRNRFALSSQSGGGLITLALPLDYKQERQ 772
Query: 169 YL 170
Y+
Sbjct: 773 YV 774
>gi|326917389|ref|XP_003204982.1| PREDICTED: cadherin-19-like [Meleagris gallopavo]
Length = 727
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 83/178 (46%), Gaps = 29/178 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------------- 70
G ++ QV ATD D +G RLL + YF+++P T
Sbjct: 114 GTSVTQVTATDGDDPSYG-NNARLLYSLIQGQPYFSVEPKTGVIRMASQMDRETKDQYLV 172
Query: 71 --EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATD 127
+ + + G S+TATV I ++D+ND P+FQ Y +V E G VGR+ A D
Sbjct: 173 VIQAKDMVGQAGAFSATATVTINLSDVNDNPPKFQQRLYYLNVSEEAPVGTTVGRLLAED 232
Query: 128 ADEGQNAVVYYSVPED----IPFVVDANT--GDIRTNKALDYEKQQLYLERVFLISKF 179
+D G+NA + Y + D + D T G I K +DYE ++ + RV ++++
Sbjct: 233 SDTGENAAMNYFIEGDSSDVFGIITDRETQEGIILLKKRVDYESKRKHSVRVKAVNRY 290
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I+V DIND P+F PY +VPE +G +V +V ATD D+ G NA + YS+ + P
Sbjct: 86 IKVRDINDHEPQFLDGPYVATVPEMSPEGTSVTQVTATDGDDPSYGNNARLLYSLIQGQP 145
Query: 146 -FVVDANTGDIRTNKALDYEKQQLYL 170
F V+ TG IR +D E + YL
Sbjct: 146 YFSVEPKTGVIRMASQMDRETKDQYL 171
>gi|410926011|ref|XP_003976472.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1-like
[Takifugu rubripes]
Length = 2876
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 82/180 (45%), Gaps = 26/180 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------- 67
Y R+ E+G +M ++ATD D+ + Y+++ N+ +S F +D
Sbjct: 197 YRVSIRENVEVGFEVMTIRATDGDAPSNANMIYKIV-NDDGVSSIFEIDSRNGLVRIRER 255
Query: 68 PATEHQGPIQ----------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QD 116
P E + Q D G S+TATVNI V D ND P+F Y VPE
Sbjct: 256 PDRETRDQYQLIVEANDQGKDPGPRSATATVNISVEDENDNYPQFSEKRYVVQVPENVAV 315
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ +V ATD DEG NA V+YS+ F + + TG I LDYE + Y R+
Sbjct: 316 NTKIVQVEATDKDEGNNAKVHYSIISGNIKGQFYIHSPTGVIDVINPLDYEMIREYNLRI 375
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQGP 75
+G +++ V A D+D +V Y++ NT LD E Q
Sbjct: 526 VGTSVLTVTAVDRDVNS--VVTYQISSGNTRNRFAITSQSGGGLITLALPLDYKQERQYV 583
Query: 76 IQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+ +G TA V I VTD N P FQS Y+ ++ E + G V + ATD D G
Sbjct: 584 LSIAASDGTRYDTAQVFINVTDANTHRPVFQSANYQVTLGEEKPVGHTVALISATDEDTG 643
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + +++P F +D +TG I T +DYE Q Y
Sbjct: 644 ENARITYVMEDNVPQFKIDPDTGAITTQMEIDYEDQASY 682
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 29/167 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPATEHQGPIQ--------- 77
G ++ +KATD D G+ G +EY L D+ ++ +FN+D T IQ
Sbjct: 100 GTRVITLKATDPDDGEAGRLEYSMEALFDSRSN--DFFNIDSQTGSITTIQPLDREIKDT 157
Query: 78 --------DEGGLSSTAT--VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
D G AT + + V+D ND +P F+ + Y S+ E + G V + AT
Sbjct: 158 HVFKVTVTDHGSPKRAATSYLTVTVSDTNDHSPVFEQIEYRVSIRENVEVGFEVMTIRAT 217
Query: 127 DADEGQNAVVYYSVPED----IPFVVDANTGDIRTNKALDYEKQQLY 169
D D NA + Y + D F +D+ G +R + D E + Y
Sbjct: 218 DGDAPSNANMIYKIVNDDGVSSIFEIDSRNGLVRIRERPDRETRDQY 264
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 72/161 (44%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLD----PATEHQGP 75
+++Q+ A+D+DSG G V Y + + LD P +
Sbjct: 734 SVLQISASDRDSGTNGRVSYTFQGGDDGEGDFLIETYSGIIRTARKLDRENVPVYTLKAF 793
Query: 76 IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D G L + ++++ V DIND P F+ V E G V R+ ATD DEG
Sbjct: 794 AVDRGVPPLKAPVSIHVVVQDINDNAPVFEKDVLFIDVEENSPVGSVVARITATDPDEGS 853
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D GD+ LDYE ++ Y+
Sbjct: 854 NAQIMYQIVEGNIPEVFQLDIFNGDLTALTDLDYETRKEYV 894
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 28/184 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y ++ +G T+ + ATD+D+G+ + Y + DN F +DP T
Sbjct: 618 YQVTLGEEKPVGHTVALISATDEDTGENARITYVMEDN----VPQFKIDPDTGAITTQME 673
Query: 71 ---EHQGP-----IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG-L 118
E Q I + G+ S T V I V D ND P+F Y+ +V E
Sbjct: 674 IDYEDQASYTLAIIARDNGIPQKSDTTYVEIIVQDANDNTPQFLRDMYQGTVFEDAPVYT 733
Query: 119 AVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
+V ++ A+D D G N V Y+ + F+++ +G IRT + LD E +Y + F
Sbjct: 734 SVLQISASDRDSGTNGRVSYTFQGGDDGEGDFLIETYSGIIRTARKLDRENVPVYTLKAF 793
Query: 175 LISK 178
+ +
Sbjct: 794 AVDR 797
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 22/159 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN--------LDP-----ATEHQGPIQDE 79
++QV+ATDKD G V Y ++ N Y + ++P E+ I+ +
Sbjct: 319 IVQVEATDKDEGNNAKVHYSIISGNIKGQFYIHSPTGVIDVINPLDYEMIREYNLRIKAQ 378
Query: 80 GG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
G ++ T V ++V D+ND P F S P++ +V E G +V + A D D G+N
Sbjct: 379 DGGRPPLINGTGMVVVQVVDVNDNTPMFVSTPFQATVLENVPIGYSVIHIQAIDGDSGEN 438
Query: 134 AVVYYS---VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A + Y + PFVV+ +TG I + LD E Y
Sbjct: 439 ARLEYRLIDITPGFPFVVNNSTGWITVSDELDRETTDFY 477
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 35/170 (20%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLD---------NNT------------DAASYFNLD 67
+G +++ ++A D DSG+ +EYRL+D NN+ + ++
Sbjct: 421 IGYSVIHIQAIDGDSGENARLEYRLIDITPGFPFVVNNSTGWITVSDELDRETTDFYTFG 480
Query: 68 -PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHA 125
A +H P+ +SS+A+V+I V D+ND P F Y + E G +V V A
Sbjct: 481 VEARDHGVPV-----MSSSASVSITVLDVNDNVPAFTEKVYSLKINEDAIVGTSVLTVTA 535
Query: 126 TDADEGQNAVVYYSVPEDIP---FVVDANTGD--IRTNKALDYEKQQLYL 170
D D N+VV Y + F + + +G I LDY++++ Y+
Sbjct: 536 VDRD--VNSVVTYQISSGNTRNRFAITSQSGGGLITLALPLDYKQERQYV 583
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 12/97 (12%)
Query: 100 PEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP------EDIPFVVDANT 152
P+FQ Y+ SVPE + G V + ATD D+G+ + YS+ + F +D+ T
Sbjct: 82 PQFQLPNYQVSVPENEPAGTRVITLKATDPDDGEAGRLEYSMEALFDSRSNDFFNIDSQT 141
Query: 153 GDIRTNKALDYEKQQLYLERVFLI-----SKFATSYL 184
G I T + LD E + ++ +V + + ATSYL
Sbjct: 142 GSITTIQPLDREIKDTHVFKVTVTDHGSPKRAATSYL 178
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 28/161 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPI- 76
+G + ++ ATD D G + Y++++ N D + +LD T + I
Sbjct: 837 VGSVVARITATDPDEGSNAQIMYQIVEGNIPEVFQLDIFNGDLTALTDLDYETRKEYVIV 896
Query: 77 --QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRVHA 125
L S ATV+IR+ D+ND P Q+ F S P G +G+V A
Sbjct: 897 VQATSAPLVSRATVHIRLVDLNDNQPVLQNFEIIFNNYVTNKSNSFPSG----IIGKVPA 952
Query: 126 TDADEGQNAVVYY-SVPEDIPFVVDANTGDIRTNKALDYEK 165
D D + S E +++ +TGD++ +K LD +
Sbjct: 953 HDPDVSDKLRYKFESGNELSLLLLNEDTGDLKLSKDLDNNR 993
>gi|410920982|ref|XP_003973962.1| PREDICTED: cadherin-24-like [Takifugu rubripes]
Length = 1121
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 24/145 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y AM + +G +++QV A D D +G RL+ T YF++D T
Sbjct: 165 YVAMVPEMANIGTSIIQVTARDADDPTYG-NSARLVYAITQGQDYFSVDAQTGILRTAVP 223
Query: 71 --------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E+ +Q + GGLS T TV +++TD+ND P F+ + FSV E
Sbjct: 224 DMDRESRDEYLVVLQAKDMGGHLGGLSGTTTVTVKLTDVNDNPPHFRRSAWSFSVSELAA 283
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV 140
G+ VGR+ A+D D G+NA++ +++
Sbjct: 284 PGVEVGRLTASDPDLGENALLEFTI 308
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 82/179 (45%), Gaps = 48/179 (26%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL----------------------- 66
GV + ++ A+D D G+ L+E+ +LD ++ A FNL
Sbjct: 285 GVEVGRLTASDPDLGENALLEFTILD--SEEAEIFNLTRKDKEAVIVLSKLLDYEACNSY 342
Query: 67 -----------DPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
DP +GP +D+ ATV + V + D+ P+F + Y V E
Sbjct: 343 TFSVEVSNPIVDPRYLKKGPFKDQ------ATVRVMVLNA-DEPPQFSQVRYHLDVSENC 395
Query: 116 DGL-AVGRVHATDADEGQNAVVYYSV-PEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ +VGRV A D D GQ++ + YS+ P+ P F + ++TG I T LD E++Q +
Sbjct: 396 PPVCSVGRVSAVDPDTGQSSNIRYSIDPQSDPEALFRIASDTGFISTVMELDREEEQWH 454
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 22/127 (17%)
Query: 50 EYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF 109
+YRL+ TD + L+P++E IRV DIND P F + PY
Sbjct: 124 QYRLIATATDRQTGRALEPSSE----------------FIIRVQDINDNPPVFPNEPYVA 167
Query: 110 SVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP-FVVDANTGDIRTNKA-LDY 163
VPE + G ++ +V A DAD+ G +A + Y++ + F VDA TG +RT +D
Sbjct: 168 MVPEMANIGTSIIQVTARDADDPTYGNSARLVYAITQGQDYFSVDAQTGILRTAVPDMDR 227
Query: 164 EKQQLYL 170
E + YL
Sbjct: 228 ESRDEYL 234
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 10/105 (9%)
Query: 74 GPIQDEGGLSSTATVNIRVTDINDKNPEFQS----LPYEFSVPE---GQDGLAVGRVHAT 126
G +++E L T VT+ D P + L +F V E G + + +GR+H T
Sbjct: 22 GLLKEERDLQRTRHSTKWVTESEDGGPRSRHRRSWLWNQFFVIEEYRGPEPVLIGRLH-T 80
Query: 127 DADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
D D G Y E + FV+D+NTG+I KALD E++ Y
Sbjct: 81 DMDGGDGRTKYTLEGEGVGSVFVIDSNTGNIHVTKALDREEKDQY 125
>gi|216548385|ref|NP_001136024.1| protocadherin-23 isoform 2 [Homo sapiens]
Length = 1369
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 75/164 (45%), Gaps = 30/164 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN--NTDAASYFNLDPATEHQGPI 76
Y A + +G +QV A+D DSG +G +EY L D + +A F +DP H G I
Sbjct: 668 YNATIAEHAPVGHCFLQVTASDADSGLYGFIEYSLYDGFLSYEAPQAFRIDP---HDGQI 724
Query: 77 ---------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EG 114
+D GGLS+ A V + + D+ND +P F Y S+ E
Sbjct: 725 CVSQDIDRERDPATYDLLVEAKDGGGLSAQAFVRVDLEDVNDNHPVFNPSTYVTSISDET 784
Query: 115 QDGLAVGRVHATDADEG-QNAVVYYSVPEDIP--FVVDANTGDI 155
Q G + V ATD D G V Y +P ++ F +D+ TG I
Sbjct: 785 QPGTEIINVLATDQDSGIYGTVAYELIPGNVSSLFTIDSTTGII 828
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 63/142 (44%), Gaps = 28/142 (19%)
Query: 35 QVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP------IQ 77
++ A D DSGK G + Y LL + +F ++P T EH+G +
Sbjct: 1212 KITAIDMDSGKNGQLLYFLLSD----GKFFKMNPNTGELINWVALDREHRGHHEMTVLVT 1267
Query: 78 DEGGLSSTAT--VNIRVTDINDKNPEF-QSLP---YEFSVPEGQD-GLAVGRVHATDADE 130
D G AT V + VTDIND P F Q LP V EGQ + V V A D DE
Sbjct: 1268 DRGSPPRNATMAVYVSVTDINDNRPFFPQCLPGKELHVKVLEGQPVNMLVTTVFAKDPDE 1327
Query: 131 GQNAVVYYSVPEDIPFVVDANT 152
G NA V YSV P + T
Sbjct: 1328 GNNAEVTYSVSSARPMPLKGKT 1349
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 69/170 (40%), Gaps = 36/170 (21%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-------- 76
D+ + G ++ V ATD+DSG +G V Y L+ N +S F +D T G I
Sbjct: 782 DETQPGTEIINVLATDQDSGIYGTVAYELIPGNV--SSLFTIDSTT---GIIYLTLPLSH 836
Query: 77 ------------QDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEF----SVPEGQDGL 118
QD GGL++ A V I + EF+ Y F VPE
Sbjct: 837 LESTTLSLMVSAQDGGGLTAVINADVTIHIFQTTLAPAEFERPKYTFLVYEDVPEDS--- 893
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQ 166
+G V A + + Y D+ F + G IRT K LD+E Q
Sbjct: 894 PIGTVKAREPLNSSEPIFYRISSGDLGGKFSIHPRLGTIRTRKPLDHETQ 943
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 45/99 (45%), Gaps = 16/99 (16%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV-PEDI 144
+V +RV D ND P F+ Y +V E Q G V RV ATD D G N V YSV +
Sbjct: 281 SVELRVLDENDNPPVFEQDEYRAAVREDAQPGAEVCRVRATDRDLGPNGFVRYSVRARQV 340
Query: 145 P--------------FVVDANTGDIRTNKALDYEKQQLY 169
P F V+ +G +R + LD E Q +
Sbjct: 341 PGAGSGGGALGDAAYFAVEELSGVVRVWRPLDREAQAWH 379
Score = 42.4 bits (98), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 23/109 (21%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQN------- 133
LS+ T+ +RV D+ND+ P F Y+ SV E G V V A+DADE +
Sbjct: 519 LSTEETLLLRVADLNDQPPLFSQQHYKASVSEAAAPGTVVMWVSASDADEAGSDHAWLRY 578
Query: 134 AVVYYSVPEDI---------------PFVVDANTGDIRTNKALDYEKQQ 167
VV S P ++ F +D+ +G I T + LD E Q+
Sbjct: 579 TVVQLSAPCNLGSLQSKMVHTAECGPSFAIDSESGAISTIRTLDREVQE 627
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV-- 140
S+ VNI V D+ND +P F E + + G A+ A D D G+N ++ YS+
Sbjct: 961 SSTEVNITVMDVNDNHPAFLRTSDEIRISQTTPPGTALYLARAEDRDSGRNGLIRYSIAS 1020
Query: 141 PEDIPFVVDANTGDIRTNKALDYEKQQ 167
P+ F +D G + N +L +Q+
Sbjct: 1021 PQPGVFAIDRALGVLFLNGSLGAGEQR 1047
Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 76 IQDEGGLSSTAT-VNIRVTDINDKNPEFQS----LPYEFS-VPEGQDGLAVGRVHATDAD 129
I ++G L + +T V +RV D ND +P F L E S VP+G +G++ A D D
Sbjct: 1164 IPEDGFLQNVSTTVIVRVWDENDNSPTFLHDVLFLKVEESPVPQG----VIGKITAIDMD 1219
Query: 130 EGQNA-VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQ 166
G+N ++Y+ + + F ++ NTG++ ALD E +
Sbjct: 1220 SGKNGQLLYFLLSDGKFFKMNPNTGELINWVALDREHR 1257
>gi|149065690|gb|EDM15563.1| rCG59452 [Rattus norvegicus]
Length = 3034
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 84/180 (46%), Gaps = 28/180 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y R+ E+G ++ ++ATD D+ + YRLL+ A F +D
Sbjct: 373 YRERIRENLEVGYEVLTIRATDGDAPSNANMRYRLLEG---AGGVFEIDARSGVVRTRAV 429
Query: 69 -----ATEHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QD 116
A E+Q ++ + G LS++ATV+I V D ND P+F Y VPE
Sbjct: 430 VDREEAAEYQLLVEANDQGRNPGPLSASATVHIVVEDENDNYPQFSEKRYVVQVPEDVAV 489
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V RV ATD D+GQNA ++YS+ F + + +G + LD+E + Y R+
Sbjct: 490 NTPVLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLRI 549
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 76/159 (47%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQ-- 73
+G +++ ++A D+D+ ++ Y+L NT + LD E Q
Sbjct: 717 VGSSVLTLRARDRDANS--VITYQLTGGNTRNRFALSSQSGGGLITLALPLDYKQERQYV 774
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G S TA V I VTD N P FQS Y SV E + G ++ + ATD D G
Sbjct: 775 LAVTASDGTRSHTAQVFINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATISATDEDTG 834
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + +P F +D +TG I T LDYE Q Y
Sbjct: 835 ENARITYVLEDPVPQFRIDPDTGTIYTMTELDYEDQAAY 873
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 76/167 (45%), Gaps = 33/167 (19%)
Query: 32 TLMQVKATDKDSGKFGLVEY------------------------RLLDNNTDAASYFNLD 67
+++QV ATD+DSG G + Y R LD A +NL
Sbjct: 925 SVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRENVAV--YNLW 982
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
+G + LS++ V + V DIND P F+ E V E G V R+ A
Sbjct: 983 ALAVDRG---NPNPLSASVEVQVTVLDINDNPPVFEKDELELFVEENSPVGSVVARIRAN 1039
Query: 127 DADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
D DEG NA + Y + E ++P F +D +GD+R LD+E ++ Y+
Sbjct: 1040 DPDEGPNAQIMYQIVEGNVPEVFQLDLLSGDLRALVELDFEVRRDYM 1086
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 77/176 (43%), Gaps = 39/176 (22%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQGPIQDE 79
+++V+ATD+D G+ + Y ++ N Y + + E+ I+ +
Sbjct: 493 VLRVQATDRDQGQNAAIHYSIVSGNLKGQFYLHSLSGSLDVINPLDFEAIREYTLRIKAQ 552
Query: 80 GG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
G ++S+ V+++V D+ND P F S P++ +V E G +V + A DAD G+N
Sbjct: 553 DGGRPPLINSSGLVSVQVLDVNDNAPIFVSSPFQAAVLENVPLGHSVLHIQAVDADAGEN 612
Query: 134 AVVYYSVPE--------------------DIPFVVDANTGDIRTNKALDYEKQQLY 169
A + Y + + D PF + ++G I LD E + Y
Sbjct: 613 ARLQYRLVDTASTILGGSSIDSENPVSAPDFPFQIHNSSGWITVCAELDRELLEHY 668
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 74/178 (41%), Gaps = 28/178 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y + +G ++ + ATD+D+G+ + Y L D F +DP T
Sbjct: 806 SSHYTVSVSEDRPVGTSIATISATDEDTGENARITYVL----EDPVPQFRIDPDTGTIYT 861
Query: 71 ------EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E Q QD G S T ++ I + D ND P F Y+ SV E
Sbjct: 862 MTELDYEDQAAYTLAITAQDNGIPQKSDTTSLEILILDANDNAPRFLRDFYQGSVFEDAP 921
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V +V ATD D G N + Y+ D F ++ +G IRT + LD E +Y
Sbjct: 922 PSTSVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRENVAVY 979
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 37/170 (21%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPAT---------------- 70
G +++++A D D G+ G + Y+ L D ++ YF +D T
Sbjct: 276 GTAVIELRAHDPDEGEAGRLSYQMEALFDERSNG--YFLIDATTGAVTTARALDRETKDT 333
Query: 71 --------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
+H P + S+ + + V+D ND +P F+ Y + E + G V
Sbjct: 334 HVLKVSAVDHGSPRR-----SAATYLTVTVSDTNDHSPVFEQSEYRERIRENLEVGYEVL 388
Query: 122 RVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+ ATD D NA + Y + E F +DA +G +RT +D E+ Y
Sbjct: 389 TIRATDGDAPSNANMRYRLLEGAGGVFEIDARSGVVRTRAVVDREEAAEY 438
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 99 NPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP------EDIPFVVDAN 151
+P+F Y+ SVPE + G AV + A D DEG+ + Y + + F++DA
Sbjct: 257 SPQFPLPSYQVSVPENEPAGTAVIELRAHDPDEGEAGRLSYQMEALFDERSNGYFLIDAT 316
Query: 152 TGDIRTNKALDYEKQQLYLERV 173
TG + T +ALD E + ++ +V
Sbjct: 317 TGAVTTARALDRETKDTHVLKV 338
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 76/182 (41%), Gaps = 42/182 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD---PATEHQGPIQ-------- 77
LG +++ ++A D D+G+ ++YRL+D + ++D P + P Q
Sbjct: 595 LGHSVLHIQAVDADAGENARLQYRLVDTASTILGGSSIDSENPVSAPDFPFQIHNSSGWI 654
Query: 78 ---------------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
D G +SS+A+V+I V D+ND +P F YE + E
Sbjct: 655 TVCAELDRELLEHYSFGVEAVDHGSPPMSSSASVSITVLDVNDNDPVFTQPVYELRLNED 714
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQL 168
G +V + A D D N+V+ Y + + G I LDY++++
Sbjct: 715 AAVGSSVLTLRARDRDA--NSVITYQLTGGNTRNRFALSSQSGGGLITLALPLDYKQERQ 772
Query: 169 YL 170
Y+
Sbjct: 773 YV 774
>gi|449266545|gb|EMC77591.1| Neural-cadherin, partial [Columba livia]
Length = 2420
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 82/185 (44%), Gaps = 31/185 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y A + +G ++QV ATD D G+ G + Y LL ++ +YF LD T
Sbjct: 749 SSIYEASVTEGAAVGTFVVQVSATDLDLGQNGEITYSLLHDSGRDYTYFRLDSQTGSVYT 808
Query: 71 ------EHQG----------------PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYE 108
E +G P + S TA V + ++D+ND P F YE
Sbjct: 809 ASVFDREKKGSYLLEVKSVDGSESARPGKHGKPNSDTAYVRVFISDVNDNKPVFTQSVYE 868
Query: 109 FSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
+V E QD G A+ V A D DEG NA + Y + V+ TG I + LDYE
Sbjct: 869 VNVDEDQDVGSAIITVTANDEDEGTNAKLRYQITAGNTGGVLDVEPETGAIFIAQPLDYE 928
Query: 165 KQQLY 169
+ ++Y
Sbjct: 929 ETKMY 933
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 52/98 (53%), Gaps = 6/98 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L++ T+ I +TD+ND P F S YE SV EG G V +V ATD D GQN + YS+
Sbjct: 727 LAAFTTIYINLTDVNDNVPFFTSSIYEASVTEGAAVGTFVVQVSATDLDLGQNGEITYSL 786
Query: 141 PED-----IPFVVDANTGDIRTNKALDYEKQQLYLERV 173
D F +D+ TG + T D EK+ YL V
Sbjct: 787 LHDSGRDYTYFRLDSQTGSVYTASVFDREKKGSYLLEV 824
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLP---YEFSVPEGQ-DGLAVGRVHATDADEGQNAVVY 137
L+STA V +++ D+N+ P FQ SV E Q G V +V ATDADEG N +V
Sbjct: 406 LTSTAQVVVKIDDVNNNKPVFQKCQDYREHASVLENQPSGTVVLQVEATDADEGANGIVK 465
Query: 138 YSVPED---IP-FVVDANTGDIRTNKALDYEKQQLY 169
Y + +P F + +TG + T + D EKQ+ Y
Sbjct: 466 YGLMHRGGVLPAFSIHPDTGVLTTVQVFDREKQREY 501
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 12/137 (8%)
Query: 42 DSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPE 101
D G+ R +D +D Y L A E +EG SS A V + +TD+ND PE
Sbjct: 163 DGATGGISLTRDVDYESDQHQYLLLVRAEE------NEGHFSSAAEVLVVITDVNDCAPE 216
Query: 102 F-QSLPYEFSVPEGQD-GLAVGRVHATDADEGQNA-VVYYSVPEDIPFVVDANTGDIRTN 158
F +S+ + VPE A+ +V ATD D +NA ++YY++ +D + G I
Sbjct: 217 FHRSIYSKVDVPETVTMTTALLQVTATDCDSKENAEILYYTLSQDFSI---TSHGTIFPA 273
Query: 159 KALDYEKQQLYLERVFL 175
LDYE+ E V +
Sbjct: 274 TQLDYERPNHLYEFVIM 290
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 81/194 (41%), Gaps = 44/194 (22%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDS-GKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI 76
+YG++ + L V ++QV ATD DS G + Y L + A F +D E G I
Sbjct: 969 YYGSIIEELDGLPVFVLQVMATDPDSNADEGDLRYSL--HGHGAGDIFAID---EKTGSI 1023
Query: 77 --------------------QDEGG--LSSTATVNIRVTDINDKNPEFQSLP-------Y 107
DEGG L+ A V I V DIND P F +P +
Sbjct: 1024 YSHKMLDREERALWRFVVLATDEGGEGLTGFADVIINVWDINDNAPMFTCMPDDCNGSVF 1083
Query: 108 EFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP-------FVVDANTGDIRT-NK 159
E S P G + +G V D + G NAV+ Y + E++ F ++ NTG I
Sbjct: 1084 ENS-PAGTLVMEMGAVDRDDPNVGLNAVLTYRITENVKNEFGTDMFHINPNTGTIHVAGG 1142
Query: 160 ALDYEKQQLYLERV 173
LD E+ Y V
Sbjct: 1143 MLDRERTDSYFLTV 1156
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 79/179 (44%), Gaps = 40/179 (22%)
Query: 30 GVTLMQVKATDKDSGKFGL---VEYRLLDN--NTDAASYFNLDPATEHQGPIQDEGGL-- 82
G +M++ A D+D GL + YR+ +N N F+++P T G I GG+
Sbjct: 1089 GTLVMEMGAVDRDDPNVGLNAVLTYRITENVKNEFGTDMFHINPNT---GTIHVAGGMLD 1145
Query: 83 -----SSTATVNIR--------------VTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR 122
S TV R V D+ND P+F ++ ++PE V +
Sbjct: 1146 RERTDSYFLTVEARDGGGLTGTGTATIWVADVNDHVPQFTKKMWQATIPENSAVDSEVLQ 1205
Query: 123 VHATDADEGQNAVVYYSV---PEDIPFVVDAN----TGDIRTNKALDYEKQQLYLERVF 174
V ATD+D G+NA + +S+ D F ++ + IR K LD+E + ER F
Sbjct: 1206 VCATDSDVGENADLIFSIIGGDPDQKFYIETDKEGQCATIRLKKKLDFENAR---ERQF 1261
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 72/171 (42%), Gaps = 20/171 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT--------DAASYFNLDPAT 70
Y + ++G ++ V A D+D G + Y++ NT + + F P
Sbjct: 867 YEVNVDEDQDVGSAIITVTANDEDEGTNAKLRYQITAGNTGGVLDVEPETGAIFIAQPLD 926
Query: 71 EHQGPIQD------EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVG--R 122
+ + + +G A + I V + ND+ P F Y S+ E DGL V +
Sbjct: 927 YEETKMYEIHLLASDGKWEDYAVIIINVINKNDETPVFSINEYYGSIIEELDGLPVFVLQ 986
Query: 123 VHATD----ADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V ATD ADEG + F +D TG I ++K LD E++ L+
Sbjct: 987 VMATDPDSNADEGDLRYSLHGHGAGDIFAIDEKTGSIYSHKMLDREERALW 1037
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 23/154 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGPI 76
G ++QV+ATD D G G+V+Y L+ + F++ P T + + PI
Sbjct: 445 GTVVLQVEATDADEGANGIVKYGLM-HRGGVLPAFSIHPDTGVLTTVQVFDREKQREYPI 503
Query: 77 ------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDAD 129
Q L +NI + D ND +P F++ YE+ + E + G + RV A D D
Sbjct: 504 TVTATDQAAEPLIGICQINIIILDQNDNDPRFENTHYEYFLREDTRVGTSFLRVAAHDDD 563
Query: 130 EGQNAVVYYSVPEDIP--FVVDANTGDIRTNKAL 161
NA + YS+ + P ++ TG + N+ +
Sbjct: 564 YSSNAAITYSIANEEPNYLQINPTTGWVFVNQPI 597
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 65/143 (45%), Gaps = 16/143 (11%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE--HQGPI---------- 76
+ L+QV ATD DS + + Y L + S+ + PAT+ ++ P
Sbjct: 233 MTTALLQVTATDCDSKENAEILYYTLSQDFSITSHGTIFPATQLDYERPNHLYEFVIMAV 292
Query: 77 -QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE--GQDGLAVGRVHATDADEGQN 133
+ E + TATV I V+++ND+ PEF Y V E G + L V V+A D D
Sbjct: 293 DKGEEPKTGTATVRIHVSNVNDEAPEFSQKIYRSFVSEDAGPNTL-VATVNAVDPDGDGV 351
Query: 134 AVVYYSVPEDIPFVVDANTGDIR 156
S + FV+D N G +R
Sbjct: 352 TYDILSGNQKGNFVIDPNKGLVR 374
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSV---PEGQDGLAVGRVHATDADEGQNAVVYYSVPE-- 142
+++ VTD+ND PE+ P+ F PE G V ++ A DADEG V Y + +
Sbjct: 1 LSLTVTDVNDSVPEWAMEPFPFLAVVSPEAAGGTEVYKLLAVDADEGIGGAVEYFLLDGG 60
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFAT 181
+ F V+ +TG I+T L + + YL V K +
Sbjct: 61 EDRFEVEKDTGLIKTT-GLPLVRDKEYLLTVLAADKLGS 98
>gi|395542254|ref|XP_003773048.1| PREDICTED: protocadherin Fat 1 [Sarcophilus harrisii]
Length = 4589
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI-- 76
L + +VKATD+DSG +G + Y ++++ Y N LD T + I
Sbjct: 2508 LQTLVFEVKATDEDSGIYGQITYHIVNDFAKDRFYINERGQIFTSEKLDRETAGEKVIAI 2567
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEG 131
+D GG + T+N+ +TD ND P+F++ Y+ ++ + G +V +V A+DADEG
Sbjct: 2568 RLMAKDTGGKVAFCTINVILTDDNDNAPQFRATKYKVTIGSDAPKGTSVIKVLASDADEG 2627
Query: 132 QNAVVYYSVPED 143
NA + YS+ D
Sbjct: 2628 SNADIMYSIEAD 2639
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 67/157 (42%), Gaps = 17/157 (10%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-------LDNNTDAASYFNLDPATEHQGPI------ 76
G +MQV ATD D + Y L N D P Q +
Sbjct: 3040 GKLIMQVSATDADIRSNAEITYTLSGPGAEKFKLNADTGELKTFAPLDREQQAVYNLLVK 3099
Query: 77 -QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNA 134
D GG +V + D+ND PEF + PY +V E + + RV ATDAD G N
Sbjct: 3100 ATDGGGRFCQMSVVFTLEDVNDNAPEFSADPYAITVFENTEPKTPLTRVQATDADAGLNH 3159
Query: 135 VVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ YS+ D F +D ++G IR K LD E Q +Y
Sbjct: 3160 KIAYSLVNSADGQFSIDESSGIIRLEKPLDRELQAVY 3196
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 86/177 (48%), Gaps = 32/177 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGP 75
Y + EL ++Q++ATDKD G G V+Y LL +TD F++D T + GP
Sbjct: 828 YFIEVSENRELNSEIIQIEATDKDLGLNGEVKYYLL-TDTDK---FSIDSETGIVKVVGP 883
Query: 76 IQDEG------------------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD- 116
+ E L ST + + + D+ND P+F +P F V +D
Sbjct: 884 LDREKQHVHFLKIEARDQADMEPQLFSTVLLKVSLEDVNDNPPKF--IPSNFLVKVREDL 941
Query: 117 --GLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
G + + A D D GQ++ V YS+ + D F VD +G IR + LD+EK+Q+Y
Sbjct: 942 PEGTIIMWLEAYDPDFGQSSQVRYSLIDNGDGNFDVDKLSGAIRIVQQLDFEKKQVY 998
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 72/142 (50%), Gaps = 14/142 (9%)
Query: 35 QVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTD 94
+V DK SGK L + LD+ T F++ + H+ + + S+ ++I+V D
Sbjct: 2750 EVFVIDKHSGKLKL--EKNLDHETMKWYQFSVVAQSTHE-----DSEVVSSVDISIQVKD 2802
Query: 95 INDKNPEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE----DI--PFV 147
ND +P +S PYE F V G V +V ATD D G N + YS+ + D+ F
Sbjct: 2803 ANDNSPILESNPYEAFIVENLPGGSKVIQVKATDLDSGTNGQILYSLDQSQSLDVIESFA 2862
Query: 148 VDANTGDIRTNKALDYEKQQLY 169
+D TG I T K LD+EK+ Y
Sbjct: 2863 IDMETGWITTLKELDHEKRDKY 2884
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 76/162 (46%), Gaps = 28/162 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASY--FNLDPAT-------------EHQGPI- 76
++Q+ ATDKD K L+ L ++TD S F LDPAT HQ +
Sbjct: 1476 ILQISATDKDE-KNKLI--YTLQSSTDPLSLKKFRLDPATGSLYTTEKLDHETAHQHILT 1532
Query: 77 -----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
QD S A V + V+D+ND P F S Y+ V E G V +V A D D+
Sbjct: 1533 VMVRDQDVPVKRSFARVIVNVSDMNDHAPWFTSSSYQGRVYESAAVGSVVLQVTALDKDK 1592
Query: 131 GQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
G+NA V YS+ F +D G I+T K LD+ Q+ Y
Sbjct: 1593 GENAEVLYSIESGNIGNSFTIDPILGSIKTAKELDHSNQEEY 1634
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 71/150 (47%), Gaps = 23/150 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQ 73
+G++++QV ATD DS + Y L +N T + +F++D ++ EH+
Sbjct: 2299 IGMSVVQVHATDSDSVPNRGISYHLFENQTKSPDHFHIDGSSGLISLVRSLDYEEIQEHK 2358
Query: 74 GPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDA 128
++ D G LSS V + VTD+ND P F L YE + E G V V A DA
Sbjct: 2359 LLVRAVDSGMPPLSSDMIVTVDVTDLNDNPPLFDQLLYEAKISEQAPHGHFVTCVKAYDA 2418
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDI 155
D + YS+ E F +D+ TG I
Sbjct: 2419 DSSDIDKLEYSILSGNEHKNFAIDSKTGII 2448
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVY 137
+G SS A V ++V D ND +P + Y ++PE G + +V ATDAD NA +
Sbjct: 3001 DGTFSSKAIVEVKVLDANDNSPICEKSAYSDTIPEDTVPGKLIMQVSATDADIRSNAEIT 3060
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ P F ++A+TG+++T LD E+Q +Y
Sbjct: 3061 YTLSGPGAEKFKLNADTGELKTFAPLDREQQAVY 3094
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 19/170 (11%)
Query: 23 ARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQGPIQDEG- 80
++ + +G ++ + ATD DSG G + Y + N D+ +L+ + P+ E
Sbjct: 727 VKENYPVGSNIILMNATDLDSGFNGKLVYSISGGNDDSCFIIDLETGMLKVLSPLDRETT 786
Query: 81 ------------GLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVH 124
G+ A ++IRV D ND PEF Y V E ++ + ++
Sbjct: 787 EKYTLNITVYDLGIPQKAAWCLLDIRVLDANDNKPEFLQDNYFIEVSENRELNSEIIQIE 846
Query: 125 ATDADEGQNA-VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
ATD D G N V YY + + F +D+ TG ++ LD EKQ ++ ++
Sbjct: 847 ATDKDLGLNGEVKYYLLTDTDKFSIDSETGIVKVVGPLDREKQHVHFLKI 896
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 16/130 (12%)
Query: 57 NTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+T AS+F LD T + V ++V N PEF Y+ S E
Sbjct: 428 STQQASHFELDVMTSDS---------KAYTKVLVKVMSTNSNPPEFTQTSYKTSFDENIP 478
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
G +V V A D+DEG+N V YS+ +PFV++ TG + T++ LDYE + RV
Sbjct: 479 VGTSVMSVSAIDSDEGENGYVTYSIANLNQVPFVINHFTGAVSTSEELDYE----LMPRV 534
Query: 174 FLISKFATSY 183
+ + A+ +
Sbjct: 535 YTLRVRASDW 544
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 73/178 (41%), Gaps = 10/178 (5%)
Query: 5 PIPSALEMTSDS--LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS 62
PI + +T+ S L Y ++ D L KA + G F + R NT +
Sbjct: 57 PIKMGIYLTNPSWELRYKIISGDNENL------FKAEEHILGNFCFLRIRTKGGNTAILN 110
Query: 63 YFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVG 121
D T ++ + + + ++V D ND P F Y S+PE ++
Sbjct: 111 REVKDHYTLTVKAVEKNTNVEARTKIRVQVLDTNDLRPLFSPTSYSVSLPENTMIRTSIA 170
Query: 122 RVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
RV ATDAD G N YYS E F + +G + LDY + +LY + + +
Sbjct: 171 RVSATDADIGTNGEFYYSFKERTDMFAIHPTSGVVVLTGRLDYAETKLYEMEILAVDR 228
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 25/169 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN---------TDAASYF--NLD 67
YGA + +G ++QV A +D + Y ++ N T A + NLD
Sbjct: 3236 YGATVPEDILVGTEVLQVYAASRDIEVNAEITYAIISGNEHGKFSIDSTTGAIFIIDNLD 3295
Query: 68 PATEHQGPIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--- 118
+ H+ + E GG L+ A VNI VTDIND P F Y + E D +
Sbjct: 3296 YESSHEYYLTVEATDGGTPSLNDVAAVNINVTDINDNTPVFSQDTYTAVISE--DAVLEQ 3353
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
+V V A DAD N ++YS+ + PF +D G+I+ + LD E
Sbjct: 3354 SVVTVMADDADGPSNNYIHYSIIDGNQGNPFTIDPVKGEIKVTQLLDRE 3402
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 73/169 (43%), Gaps = 28/169 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYFNLDPATE----------------H 72
G ++QVKATD DSG G + Y L + + D F +D T H
Sbjct: 2826 GSKVIQVKATDLDSGTNGQILYSLDQSQSLDVIESFAIDMETGWITTLKELDHEKRDKYH 2885
Query: 73 QGPIQDEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
I + G LSSTA V I VTD+ND P F + Y+ +V E G + + TD
Sbjct: 2886 ITVIASDYGEKVQLSSTAVVEISVTDVNDNPPRFTAEIYKGTVSEDDPPGGVIAILSTTD 2945
Query: 128 AD--EGQNAVVYYSVPEDI--PFVVD--ANTGDIRTNKALDYEKQQLYL 170
AD E V YY D F V+ N + K LD EK+ YL
Sbjct: 2946 ADTEEINRQVTYYITGGDPLGQFAVENIQNEWKVYVKKPLDREKKDNYL 2994
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 76/175 (43%), Gaps = 27/175 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGP 75
Y + E L +V+ATD D+G + Y L+++ A F++D ++ + P
Sbjct: 3131 YAITVFENTEPKTPLTRVQATDADAGLNHKIAYSLVNS---ADGQFSIDESSGIIRLEKP 3187
Query: 76 IQDE-----------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
+ E L++T TV + V DIND P F+ Y +VPE G
Sbjct: 3188 LDRELQAVYNLILKAVDHGVPRRLTATGTVIVSVLDINDNPPVFEYREYGATVPEDILVG 3247
Query: 118 LAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V +V+A D NA + Y++ E F +D+ TG I LDYE Y
Sbjct: 3248 TEVLQVYAASRDIEVNAEITYAIISGNEHGKFSIDSTTGAIFIIDNLDYESSHEY 3302
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 34/178 (19%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-- 70
TS+ ++Y + + + V+++Q++A D DS + Y++ N +F++ P T
Sbjct: 1140 TSEPVYYPEVMENSPK-DVSVVQIEAFDPDSSSNDKLTYKITSGNPQG--FFSIHPKTGL 1196
Query: 71 --------------EH--QGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH + + D+G S+ A V +++ D ND P+F Y+ +P
Sbjct: 1197 ITTTSRKLDREQQNEHILEVTVTDDGIPPKSTIARVIVKILDENDNKPQFLQKFYKIRLP 1256
Query: 113 E--------GQDGLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNK 159
E + RV ATD DEG NA + YS+ E F ++ TG + + K
Sbjct: 1257 ERDKPERERSAKREPIYRVIATDKDEGPNAEISYSIEDGDEHGKFFIEPKTGVVSSKK 1314
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR--------VHATDADEG 131
GLS+ TV + + D ND P F Y + E +V + A DAD+
Sbjct: 1744 AGLSANTTVWVHLQDENDNVPVFMQAEYTGLISESASINSVVLTDKNVPLVIRAMDADKE 1803
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
NA++ Y + E F +D++TG IRT +LDYE+ ++
Sbjct: 1804 SNALLVYQIVEPSAHKYFAIDSSTGAIRTVLSLDYEEAHIF 1844
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G+ + V+I V D+ND P F Y ++ E G++V +VHATD+D N + Y
Sbjct: 2263 GVHAEVFVDIIVEDVNDNPPVFAQQSYTTTLSEATVIGMSVVQVHATDSDSVPNRGISYH 2322
Query: 140 VPEDIP-----FVVDANTGDIRTNKALDYEKQQ 167
+ E+ F +D ++G I ++LDYE+ Q
Sbjct: 2323 LFENQTKSPDHFHIDGSSGLISLVRSLDYEEIQ 2355
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 74/174 (42%), Gaps = 26/174 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
+L Y A+ + E+G + V A D+D G+ G V Y L +++ +F + P+ E
Sbjct: 2084 NLPYYAVVKVDAEVGHIIRCVTAVDRDIGRNGEVHYYLKEHH----EHFQIGPSGEISLK 2139
Query: 76 -----------------IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
+D G + +A V + +T +N P F+ Y +PE L
Sbjct: 2140 KKFEPDTLNKEYLITIVAKDGGDPAFSAEVIVPITVMNKAMPVFEKAFYSAEIPENIQ-L 2198
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
VH A+ + V+YS+ E P F ++ NTG I LD+E Y
Sbjct: 2199 HSPVVHV-QANSPEGLKVFYSITEGDPFSQFTINFNTGVINVIAPLDFESHPAY 2251
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI 144
A V I V DIND P F + YE SV G+ V V+ATDAD + + YS+PE
Sbjct: 1864 ANVTIHVIDINDCPPVFSKMLYESSVLVPTYKGVKVITVNATDADSVAFSQLMYSIPEGN 1923
Query: 145 ---PFVVDANTGDI 155
F++D TG I
Sbjct: 1924 IGEKFLIDPKTGTI 1937
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 70/172 (40%), Gaps = 26/172 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------ATE 71
Y + +G ++QV A DKD G+ V Y + N + F +DP A E
Sbjct: 1568 YQGRVYESAAVGSVVLQVTALDKDKGENAEVLYSIESGNI--GNSFTIDPILGSIKTAKE 1625
Query: 72 HQGPIQDEGGLSSTAT------------VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
Q+E L AT V+I VT ++ P F S Y + E +
Sbjct: 1626 LDHSNQEEYDLMVKATDRGNPPMSEITSVHIFVTISDNAIPRFTSKEYSTEISEAA---S 1682
Query: 120 VGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
+G + Q++VVY +I F ++ N+G I T K LD+E Y
Sbjct: 1683 IGSFIGIISAHSQSSVVYEIKDGNIGDAFDINPNSGVIITQKTLDFETLPFY 1734
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 18/143 (12%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTAT-VNIRVTDINDK 98
D D G ++ R LD + S +NL ++ G ++ T V I+V D ND
Sbjct: 1404 DVDKGTGTIIVARPLD--AEQKSNYNLT--------VEATDGTTAIITQVLIKVIDTNDH 1453
Query: 99 NPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDIP-----FVVDANT 152
P+F YE +PE + ++ ATD DE +N ++Y P F +D T
Sbjct: 1454 RPQFSKSKYEVLIPEDTVPDTEILQISATDKDE-KNKLIYTLQSSTDPLSLKKFRLDPAT 1512
Query: 153 GDIRTNKALDYEKQQLYLERVFL 175
G + T + LD+E ++ V +
Sbjct: 1513 GSLYTTEKLDHETAHQHILTVMV 1535
Score = 39.7 bits (91), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 76/180 (42%), Gaps = 32/180 (17%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--- 77
A+ ++ +G ++M V A D+D+G+ G + + + F +D E +G I+
Sbjct: 1042 ALVKEDVPIGTSVMTVSAHDEDTGRDGEIHFSI--RGGSGIGIFKID---EEKGVIETAE 1096
Query: 78 -----------------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DG 117
D+G LSS + I V D+ND P+ Y V E
Sbjct: 1097 KLDRETVSHYWLTVFATDQGVVPLSSFTEIYIEVEDVNDNAPQTSEPVYYPEVMENSPKD 1156
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDI-RTNKALDYEKQQLYLERV 173
++V ++ A D D N + Y + P F + TG I T++ LD E+Q ++ V
Sbjct: 1157 VSVVQIEAFDPDSSSNDKLTYKITSGNPQGFFSIHPKTGLITTTSRKLDREQQNEHILEV 1216
Score = 35.8 bits (81), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 59/143 (41%), Gaps = 28/143 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y A+ + L +++ V A D D + Y ++D N + F +DP +G I+
Sbjct: 3341 YTAVISEDAVLEQSVVTVMADDADGPSNNYIHYSIIDGN--QGNPFTIDPV---KGEIKV 3395
Query: 78 -------------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
D G +T TVNI V+D+ND P F Y + E +
Sbjct: 3396 TQLLDREMISGYTLTVQAADNGSPPRVNTTTVNIDVSDVNDNPPVFSKGNYSIIIQENKP 3455
Query: 117 -GLAVGRVHATDADEGQNAVVYY 138
G++V ++ TD D N ++
Sbjct: 3456 VGVSVLQLVVTDKDSSHNGPPFF 3478
>gi|297676223|ref|XP_002816042.1| PREDICTED: protocadherin beta-8 [Pongo abelii]
Length = 801
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 20/172 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY + +G +++V ATD D+G G + Y L + + F +D T
Sbjct: 247 FYRVQISEDSPVGFLVVKVSATDADTGVNGEISYSLFQASDEIGKTFKVDFLTGEIRLRK 306
Query: 71 ----------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
E +D GG S TV I+V D+ND PE + +PE V
Sbjct: 307 QLDFEKFQSYEVNIEARDAGGFSGKCTVLIQVMDVNDHAPEVTMSAFTSPIPENAPETVV 366
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
+D D +N + S+ ED+PF++ ++ G+ + T LD E + Y
Sbjct: 367 ALFSVSDLDSEENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEY 418
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
S TA V I V D+ND PEF+ Y + E G V +V ATDAD G N + YS+
Sbjct: 224 SGTAQVYIEVLDVNDNAPEFEQPFYRVQISEDSPVGFLVVKVSATDADTGVNGEISYSLF 283
Query: 141 --PEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
++I F VD TG+IR K LD+EK Q Y
Sbjct: 284 QASDEIGKTFKVDFLTGEIRLRKQLDFEKFQSY 316
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L++ + + V+D+ND P F Y V E L +G V ATD D G NA V YS+
Sbjct: 432 LTTHLNMTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSL 491
Query: 141 --PED--IPFV----VDANTGDIRTNKALDYEKQQLYLERV 173
P+D +P ++A+ G + ++LDYE Q + RV
Sbjct: 492 LPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRV 532
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 76/187 (40%), Gaps = 35/187 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL-------------DNNTDAASYFN 65
Y R+ + + + V ATD+DSG V Y LL N D F
Sbjct: 457 YTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFA 516
Query: 66 LDP-------ATEHQGPIQDEG--GLSSTATVNIRVTDINDKNP------EFQSLPYEFS 110
L A E + D G LSS A V + V D ND +P + S P
Sbjct: 517 LRSLDYEALQAFEFRVGATDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTEL 576
Query: 111 VPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL---DY 163
VP + G V +V A D D GQNA + Y + E F V A+ G++RT + L D
Sbjct: 577 VPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFSVWAHNGEVRTARLLSERDA 636
Query: 164 EKQQLYL 170
K +L +
Sbjct: 637 AKHRLVV 643
>gi|54019434|ref|NP_955798.1| protocadherin alpha-2 precursor [Rattus norvegicus]
gi|40645520|dbj|BAD06367.1| cadherin-related neuronal receptor 2 [Rattus norvegicus]
gi|50512326|gb|AAT77558.1| protocadherin alpha 2 [Rattus norvegicus]
Length = 948
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 75/147 (51%), Gaps = 19/147 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGG---LSSTATVN 89
+ V+ +D+ S LV + LD +A L + +GG L+ T +
Sbjct: 179 FLDVQTSDELSQSLFLVLGKSLDREENAEVKLLL---------VATDGGKPELTGTVQIL 229
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP--- 145
I+V D+ND P F Y+ + E +G V +++A+DADEG N+ + YS+ D+
Sbjct: 230 IKVLDVNDNEPTFPQSVYKVPLLENTANGTLVIKLNASDADEGANSEIVYSLSSDVSSTT 289
Query: 146 ---FVVDANTGDIRTNKALDYEKQQLY 169
F +DAN+G+IRT LDYE++ Y
Sbjct: 290 RTKFQIDANSGEIRTTGELDYEEKTSY 316
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 72/180 (40%), Gaps = 38/180 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------------NTDAASYFN 65
Y ++ + G + V A D D+ + LV Y L++ + ++ F
Sbjct: 460 YTVFVKENNPPGAHIFTVSAVDADAQENALVFYSLVERRMGERLLSSYVSVHAESGKVFA 519
Query: 66 LDPA-------TEHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPY--------- 107
L P + Q +D G L S T+ + V D ND P LP+
Sbjct: 520 LQPLDHEELELLQFQVSARDAGVPALGSNVTLQVFVLDENDNAPML--LPHGAVGVGGSV 577
Query: 108 -EFSVPEGQDGLAVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALD 162
E G V +VHA DAD G NA + Y +V IPF V TG+I T +ALD
Sbjct: 578 SELVPRSVGSGHVVTKVHAVDADSGYNAWLSYELQPTVGTRIPFRVGLYTGEISTTRALD 637
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 28/167 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVE--------YRLLDNNTDAASYFNLDPATEHQGPIQ--- 77
LG + + +D+DSG G V ++L+ + S LD A + + +
Sbjct: 365 LGAVIALISVSDRDSGINGQVTCSLSPHLPFKLVSTFKNYYSLV-LDSALDRETTAEYKV 423
Query: 78 ----DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
+GG L +TAT+++ V D+ND P F Y V E G + V A DAD
Sbjct: 424 MVTARDGGSPSLQATATISVEVADVNDNAPLFAQPEYTVFVKENNPPGAHIFTVSAVDAD 483
Query: 130 EGQNAVVYYSVPED-------IPFV-VDANTGDIRTNKALDYEKQQL 168
+NA+V+YS+ E +V V A +G + + LD+E+ +L
Sbjct: 484 AQENALVFYSLVERRMGERLLSSYVSVHAESGKVFALQPLDHEELEL 530
Score = 35.8 bits (81), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 27/141 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLL-DNNTDAASYFNLDPAT-----------------E 71
G ++++ A+D D G + Y L D ++ + F +D + E
Sbjct: 258 GTLVIKLNASDADEGANSEIVYSLSSDVSSTTRTKFQIDANSGEIRTTGELDYEEKTSYE 317
Query: 72 HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQ----SLPYEFSVPEGQDGLAVGRVHA 125
Q D+G +S +++++ DIND PE SLP + + P G + +
Sbjct: 318 IQIIASDKGTPSMSGHCKISVKLMDINDNTPEVSITSLSLPVQENAPLGA---VIALISV 374
Query: 126 TDADEGQNAVVYYSVPEDIPF 146
+D D G N V S+ +PF
Sbjct: 375 SDRDSGINGQVTCSLSPHLPF 395
>gi|395503046|ref|XP_003755884.1| PREDICTED: cadherin-24 [Sarcophilus harrisii]
Length = 781
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 82/185 (44%), Gaps = 31/185 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGP 75
Y A + +G +++QV A D D +G +L+ D +F++DP T P
Sbjct: 155 YHATVPEMSNVGTSVIQVTAQDADDPSYG-NSAKLVYTVLDGLPFFSVDPQTGVVRTAIP 213
Query: 76 IQDE-------------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
D GGLS + TV + ++D+ND P+F Y+FSV E
Sbjct: 214 NMDRETQEVFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAG 273
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV-----PEDIPFVVDANTGD--IRTNKALDYEKQQL 168
G VGR+ A D D G NA++ YS+ E DA D + K LD+E ++
Sbjct: 274 PGALVGRLRAQDPDLGDNALMAYSILDGEGAETFSISTDAQGQDGLLTIRKPLDFESRRS 333
Query: 169 YLERV 173
Y RV
Sbjct: 334 YAFRV 338
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 64/127 (50%), Gaps = 22/127 (17%)
Query: 50 EYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF 109
+Y LL D AS L+P +E I+V DIND P F PY
Sbjct: 114 QYVLLAQAVDRASNRPLEPPSEFI----------------IKVQDINDNPPVFPLGPYHA 157
Query: 110 SVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIPFV-VDANTGDIRTN-KALDY 163
+VPE + G +V +V A DAD+ G +A + Y+V + +PF VD TG +RT +D
Sbjct: 158 TVPEMSNVGTSVIQVTAQDADDPSYGNSAKLVYTVLDGLPFFSVDPQTGVVRTAIPNMDR 217
Query: 164 EKQQLYL 170
E Q+++L
Sbjct: 218 ETQEVFL 224
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 71/178 (39%), Gaps = 45/178 (25%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDN--------NTDA--------------------- 60
G + +++A D D G L+ Y +LD +TDA
Sbjct: 275 GALVGRLRAQDPDLGDNALMAYSILDGEGAETFSISTDAQGQDGLLTIRKPLDFESRRSY 334
Query: 61 -----ASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
A+ +DPA +GP +D A+V + V D + P F Y +VPE
Sbjct: 335 AFRVEATNTLIDPAYLRRGPFKD------VASVRVAVQDAPEP-PVFTHSTYHLAVPENS 387
Query: 116 -DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
G VGRV A D D + + Y +P P F ++ G IRT+ LD E + +
Sbjct: 388 APGTLVGRVSAMDLDSPASPIRYSILPHSDPERCFSIEPEDGTIRTSVPLDREARAWH 445
>gi|345793797|ref|XP_849553.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-A11 [Canis
lupus familiaris]
Length = 821
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 78/172 (45%), Gaps = 27/172 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------------- 70
G ++ V ATD D G G V Y + + + F LD T
Sbjct: 258 GTRVLMVNATDPDEGINGEVVYSFRNMESKTSEIFQLDSQTGEVLIRGSLDFEKYRFYEM 317
Query: 71 EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
E QG QD GGLS+TA V I V D+ND PE SV E G + ++ D D
Sbjct: 318 EIQG--QDGGGLSTTAKVFITVVDVNDNAPEITITSSTNSVLENSPPGTVIALLNVQDQD 375
Query: 130 EGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLYLERVFLISK 178
G+N V +P +PF ++ G+ + TN+ LD ++Q++ + L++K
Sbjct: 376 SGENGQVSCFIPNSLPFKLEKTYGNYYKLITNRMLD--REQVHSYNITLVAK 425
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 61/129 (47%), Gaps = 26/129 (20%)
Query: 54 LDNNTDAASYFNL------DPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPY 107
LD +AA + L DP HQG + +++ V D+ND P+F Y
Sbjct: 200 LDREREAAHHLLLTAFDGGDPI--HQGAV----------AIHVVVLDVNDHVPKFTQSVY 247
Query: 108 EFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV------PEDIPFVVDANTGDIRTNKA 160
S+PE G V V+ATD DEG N V YS +I F +D+ TG++ +
Sbjct: 248 RVSIPEDLSSGTRVLMVNATDPDEGINGEVVYSFRNMESKTSEI-FQLDSQTGEVLIRGS 306
Query: 161 LDYEKQQLY 169
LD+EK + Y
Sbjct: 307 LDFEKYRFY 315
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 79/186 (42%), Gaps = 36/186 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA---SYFNLDPAT----- 70
Y + + G + V A D DS + V Y L+++ A SY +++ T
Sbjct: 457 YSVYIPENNPRGASFFSVMALDLDSRENSQVTYSLVEDTLQGAPLSSYISINSDTGTLYA 516
Query: 71 ------------EHQGPIQDEG--GLSSTATVNIRVTDINDKNPE--FQSLPY------E 108
+ +D G LSS +V+I V D ND PE + +LP E
Sbjct: 517 LHSFDYEQFRDLQLWVTAKDSGNPSLSSNVSVSIFVLDQNDNAPEILYPTLPIDGSTGVE 576
Query: 109 FSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL---D 162
+ + G V +V A D D GQNA + Y + E F V +TG++RT +AL D
Sbjct: 577 LAPRYAEPGYLVTKVVAVDKDSGQNAWLSYHLLKASEPGLFQVGLHTGEVRTARALLDRD 636
Query: 163 YEKQQL 168
KQ L
Sbjct: 637 ALKQSL 642
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 19/131 (14%)
Query: 46 FGLVEYRLLDNNTDAASYFNLDPATEHQG--PIQDEGGLSSTATVNIRVTDINDKNPEFQ 103
+ L+ R+LD + +N+ + QG P LS+ ++I+V D ND P F
Sbjct: 402 YKLITNRMLDR--EQVHSYNITLVAKDQGFPP------LSTETHISIKVADDNDNPPTFV 453
Query: 104 SLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDIP--------FVVDANTGD 154
Y +PE G + V A D D +N+ V YS+ ED ++++TG
Sbjct: 454 DSSYSVYIPENNPRGASFFSVMALDLDSRENSQVTYSLVEDTLQGAPLSSYISINSDTGT 513
Query: 155 IRTNKALDYEK 165
+ + DYE+
Sbjct: 514 LYALHSFDYEQ 524
>gi|334311659|ref|XP_003339648.1| PREDICTED: cadherin-22-like [Monodelphis domestica]
Length = 816
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 84/183 (45%), Gaps = 37/183 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD---------------------- 67
G ++MQV A+D D +G RL+ + D +F +D
Sbjct: 177 GTSVMQVMASDADDPTYG-SSARLVYSVLDGEQHFTVDNKTGVIRTAVADLDREKQERYE 235
Query: 68 ---PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
AT+ G + GGLS + TV I +TD+ND P F Y+FS+ E G A+GRV
Sbjct: 236 VVIRATDMAGQL---GGLSGSTTVTIVITDVNDNPPRFPQKMYQFSIVETAPIGTAIGRV 292
Query: 124 HATDADEGQNAVVYYSVPED-----IPFVVDANTGD--IRTNKALDYEKQQLYLERVFLI 176
A D+D G+N + Y + ++ D+NT + I K LD+E Q + + +
Sbjct: 293 KAEDSDVGENTDMTYQLKDEGGGDMFKVTTDSNTQEAIITVQKHLDFEAQATHTVVLEAL 352
Query: 177 SKF 179
+KF
Sbjct: 353 NKF 355
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 69/169 (40%), Gaps = 35/169 (20%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL------------LDNNTDAA-----SYFNLDPATE 71
+G + +VKA D D G+ + Y+L D+NT A + + +
Sbjct: 285 IGTAIGRVKAEDSDVGENTDMTYQLKDEGGGDMFKVTTDSNTQEAIITVQKHLDFEAQAT 344
Query: 72 HQGPIQ-----------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLA 119
H ++ D G A V + V D+ D+ PEF+ V E Q G
Sbjct: 345 HTVVLEALNKFVDPRFVDLGTFRDQAIVRVTVMDV-DEPPEFRPPSGLMEVQEDAQIGSI 403
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYE 164
VG V A D D N V Y++ D F +DA+TG I T K LD E
Sbjct: 404 VGVVTALDPD-AANRPVRYAIDRDSDLEQIFNIDADTGAIVTGKGLDRE 451
Score = 35.4 bits (80), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 12/115 (10%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRV 92
L Q+ D D+G +V + LD T A + N+ D S A++ IR+
Sbjct: 429 LEQIFNIDADTG--AIVTGKGLDRET--AGWHNITVLAMEA----DNHSQVSRASLQIRI 480
Query: 93 TDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYY--SVPEDI 144
D+ND PE + PYE +V E + G + + D DE Q +Y VPE +
Sbjct: 481 LDVNDNPPELAT-PYEAAVCEDAKPGQLIQTISVVDRDEPQGGHRFYFRLVPEAV 534
>gi|297674808|ref|XP_002815402.1| PREDICTED: protocadherin Fat 1 [Pongo abelii]
Length = 4588
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 17/132 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI-- 76
L +M+VK TD DSG +G V Y ++++ Y N LD T + I
Sbjct: 2507 LHTLVMEVKTTDGDSGIYGHVTYHIVNDFAKDRFYINERGQIFTLEKLDRETPAEKVISV 2566
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEG 131
+D GG + TVN+ +TD ND P+F++ YE ++ G +V +V A+DADEG
Sbjct: 2567 RLMAKDAGGKVAFCTVNVILTDDNDNAPQFRATKYEVNIGSSAAKGTSVIKVLASDADEG 2626
Query: 132 QNAVVYYSVPED 143
NA + Y++ D
Sbjct: 2627 SNADITYAIEAD 2638
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 29/176 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
++ ++ DK E+ ++QV+ATDKD G G V Y +L +TDA F++D T
Sbjct: 827 YFVEVSEDK-EVHSEIIQVEATDKDLGPNGHVTYSIL-TDTDA---FSIDSVTGVVKITR 881
Query: 71 --------EHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
EH I+ +E L ST + + + D+ND P+F Y V E
Sbjct: 882 PLDRELQHEHYLKIEARDQAREEPQLFSTVILKVSLEDVNDNPPKFIPPNYRVKVREDLP 941
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
+G + + A D D GQ+ V YS+ + + F VD +G +R + LD+EK+Q+Y
Sbjct: 942 EGTVIMWLEAQDPDLGQSGQVRYSLMDHGEGNFDVDKLSGAVRIVQQLDFEKKQVY 997
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 73/160 (45%), Gaps = 23/160 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ ATD D + Y LL + A F L+P T E Q
Sbjct: 3039 GKLIMQISATDADIRSNAEITYTLLGS---GAEKFKLNPDTGELRTSTPLDREEQAVYHL 3095
Query: 78 -----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D GG A++ + + D+ND PEF PY +V E + G + R ATDAD G
Sbjct: 3096 LVRATDGGGRFCQASIVLTLEDVNDNAPEFSVDPYAVTVFENTEPGTLLTRAQATDADTG 3155
Query: 132 QNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
N + YS+ + D F ++ +G I+ K LD E Q +Y
Sbjct: 3156 LNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVY 3195
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKN 99
D+ SG+ L + LD+ T F++ QD+ + ++ V+I+V D ND +
Sbjct: 2754 DRQSGRLKL--EKSLDHETTKWYQFSILARC-----TQDDHEMVASVDVSIQVKDANDNS 2806
Query: 100 PEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI------PFVVDANT 152
P F+S PYE F V G V ++ A+DAD G N V YS+ + F ++ T
Sbjct: 2807 PVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMET 2866
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G I T K LD+EK+ Y +V
Sbjct: 2867 GWITTLKELDHEKRDNYQIKV 2887
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 77/169 (45%), Gaps = 25/169 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--------TDAASYF---NLD 67
YGA + +G ++QV A +D + Y ++ N + + F NLD
Sbjct: 3235 YGATVSEDIVVGTEVLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLD 3294
Query: 68 PATEHQGPIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--- 118
+ H+ + E GG LS ATVNI VTDIND P F Y + E D +
Sbjct: 3295 YESSHEYYLTVEATDGGTPSLSDVATVNINVTDINDNTPVFSQDTYTTVISE--DAVLEQ 3352
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
+V V A DAD N+ ++YS+ + F +D G+++ K LD E
Sbjct: 3353 SVITVMADDADGPSNSHIHYSIVDGNQGSSFTIDPVRGEVKVTKLLDRE 3401
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 23/160 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV+ATD DS + Y++ N + + +F++D +T
Sbjct: 2288 YAATLSEASVIGTSVVQVRATDSDSEPNRGISYQMFGNLSKSHDHFHVDSSTGLISLLRT 2347
Query: 71 -------EHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
+H ++ +GG LSS V + VTD+ND P F+ YE + E G
Sbjct: 2348 LDYEQSRQHTIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPHGH 2407
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
V V A DAD + YS+ + FV+D+ TG I
Sbjct: 2408 FVTCVKAYDADSSDIDKLQYSILSGSDHKHFVIDSATGII 2447
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 74/172 (43%), Gaps = 21/172 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + E G L + +ATD D+G + Y L+D+ S L + + P+
Sbjct: 3130 YAVTVFENTEPGTLLTRAQATDADTGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDR 3189
Query: 78 -------------DEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAV 120
D+G L++T TV + V DIND P F+ Y +V E G V
Sbjct: 3190 ELQAVYTLSLKAVDQGLLRRLTATGTVVVSVLDINDNPPVFEYREYGATVSEDIVVGTEV 3249
Query: 121 GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V+A D NA + YS+ E F +D+ TG + + LDYE Y
Sbjct: 3250 LQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEY 3301
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVY 137
+G SS A V ++V D ND +P + Y ++PE G + ++ ATDAD NA +
Sbjct: 3000 DGTFSSKAVVEVKVLDANDNSPVCEKTLYSDTIPEDVLPGKLIMQISATDADIRSNAEIT 3059
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ F ++ +TG++RT+ LD E+Q +Y
Sbjct: 3060 YTLLGSGAEKFKLNPDTGELRTSTPLDREEQAVY 3093
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 2/144 (1%)
Query: 37 KATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIN 96
KA + G F + R NT + D T ++ + + V ++V D N
Sbjct: 84 KAEEYILGDFCFLRIRTKGGNTAILNREVKDHYTLIVKALEKNTNVEARTKVRVQVLDTN 143
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGD 154
D P F Y S+PE ++ RV ATDAD G N YYS + F + +G
Sbjct: 144 DLRPLFSPTSYSVSLPENTAIRTSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGV 203
Query: 155 IRTNKALDYEKQQLYLERVFLISK 178
I LDY + +LY + + +
Sbjct: 204 IVLTGRLDYLETKLYEMEILAVDR 227
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE 142
++ V ++V N PEF Y+ + E G V + A D DEG+N V YS+
Sbjct: 445 ASTKVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYSIAN 504
Query: 143 --DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSY 183
+PF +D TG + T++ LDYE + RV+ + A+ +
Sbjct: 505 LNHVPFAIDHFTGAVSTSENLDYE----LMPRVYTLRIRASDW 543
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 19/173 (10%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQGPIQD 78
G ++ +G +++ + +TD D+G G + Y + N D+ +++ + P+
Sbjct: 723 GIQVKESQPVGSSVIFMNSTDLDTGFNGKLVYAVSGGNEDSCFMIDMETGMLKILSPLDR 782
Query: 79 EGGLSSTATV----------------NIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VG 121
E T V ++ V D ND PEF Y V E ++ + +
Sbjct: 783 ETADKYTLNVTVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSEDKEVHSEII 842
Query: 122 RVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYLERV 173
+V ATD D G N V YS+ D F +D+ TG ++ + LD E Q + ++
Sbjct: 843 QVEATDKDLGPNGHVTYSILTDTDAFSIDSVTGVVKITRPLDRELQHEHYLKI 895
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 75/173 (43%), Gaps = 36/173 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLD--------------------- 67
G ++Q++A+D DSG G V Y L + + F ++
Sbjct: 2825 GSRVIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQ 2884
Query: 68 ---PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRV 123
A++H IQ LSSTA V++ VTD+ND P F + Y+ +V E G + +
Sbjct: 2885 IKVVASDHGEMIQ----LSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSEDDPPGGVIAIL 2940
Query: 124 HATDAD-EGQNAVVYYSVPEDIP---FVVD--ANTGDIRTNKALDYEKQQLYL 170
TDAD E N V Y + P F V+ N + K LD EK+ YL
Sbjct: 2941 STTDADSEEINRQVTYFITGGDPLGQFAVENIQNEWKVYVKKPLDREKRDNYL 2993
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 11/101 (10%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR--------VHATDADEG 131
GLS+ TV + + D ND +P F Y + E +V + ATDAD+
Sbjct: 1743 AGLSTNTTVLVHLQDENDNSPVFMQAEYTGLISESASINSVVLTDRNIPLVIRATDADKD 1802
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
NA++ Y + E F +D++TG I T +LDYE+ ++
Sbjct: 1803 SNALLVYHIVEPSVHKYFAIDSSTGAIHTVLSLDYEETSIF 1843
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE-------------HQGPI--- 76
++Q+ A D+D K L+ + + F LDPAT HQ
Sbjct: 1475 ILQISAVDQDE-KNKLIYTLQSSRDPLSLKKFRLDPATGSLYTSEKLDHEAVHQHTFTVM 1533
Query: 77 ---QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
QD + A + + V+D ND P F + Y+ V E G V +V A D D+G+
Sbjct: 1534 VRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVTALDKDKGK 1593
Query: 133 NAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
NA V YS+ F++D G I+T K LD Q Y
Sbjct: 1594 NAEVLYSIESGNIGNSFMIDPVLGSIKTAKELDRNNQVEY 1633
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 34/178 (19%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-- 70
TS+ ++Y + + + V+++Q++A D DS + Y++ N +F++ P T
Sbjct: 1139 TSEPVYYPEIMENSPK-DVSVVQIEAFDPDSSSNDKLMYKITSGNPQG--FFSIHPKTGL 1195
Query: 71 --------------EH--QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH + + D G S+ A V +++ D ND P+F Y+ +P
Sbjct: 1196 ITTTSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLP 1255
Query: 113 EGQD--------GLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNK 159
E + + RV ATD DEG NA + YS+ E F ++ TG + + +
Sbjct: 1256 EREKPDRERNARREPLYRVIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTGVVSSKR 1313
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 34/176 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + +G ++QV A DKD GK V Y + N + F +DP G I+
Sbjct: 1567 YKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSIESGNI--GNSFMIDPVL---GSIKT 1621
Query: 78 -------------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
D+G +S +V I VT ++ +P+F S Y + E
Sbjct: 1622 AKELDRNNQVEYDLMVKATDKGSPPMSEITSVRIFVTIADNASPKFTSKEYSVEISETVS 1681
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
G VG V A Q++VVY +I F ++ ++G I T KALD+E +Y
Sbjct: 1682 IGSFVGMVTA----HSQSSVVYEIKDGNIGDAFDINPHSGTIITQKALDFETLPIY 1733
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 34/178 (19%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
+L Y A+ + E+G + V A D+DSG+ G V Y L +++ +F + P E
Sbjct: 2083 NLPYYAVVKVDTEVGHVIRYVTAVDRDSGRNGEVHYSLKEHH----EHFQIGPLGEISLK 2138
Query: 76 IQ-----------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
Q D G + +A V + +T +N P F+ Y + E
Sbjct: 2139 KQFELDTLNKEYLVTVVAKDGGNPAFSAEVIVPITVMNKAMPVFEKPFYSAEIAENI--- 2195
Query: 119 AVGRVHA----TDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+VH+ A+ + V+YS+ + P F ++ NTG I LD+E Y
Sbjct: 2196 ---QVHSPVVHVQANSPEGLKVFYSITDGDPFGQFTINFNTGVINVIAPLDFEAHPAY 2250
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G + V+I V DIND P F Y ++ E G +V +V ATD+D N + Y
Sbjct: 2262 GAHAEVFVDIIVEDINDNPPVFAQQSYAATLSEASVIGTSVVQVRATDSDSEPNRGISYQ 2321
Query: 140 VPEDIP-----FVVDANTGDIRTNKALDYEKQQLY 169
+ ++ F VD++TG I + LDYE+ + +
Sbjct: 2322 MFGNLSKSHDHFHVDSSTGLISLLRTLDYEQSRQH 2356
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 30/171 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDN---------------------NTDAASYFNLD 67
+G +M V A D+D+G+ G + Y + D + ++ S++ L
Sbjct: 1049 IGSLVMTVSAHDEDAGRDGEIHYSIRDGSGVGVFKIGEETGVIETSDRLDRESTSHYWLT 1108
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
QG + LSS + I V D+ND P+ Y + E ++V ++ A
Sbjct: 1109 VFATDQGVVP----LSSFIEIYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAF 1164
Query: 127 DADEGQNAVVYYSVPEDIP---FVVDANTGDI-RTNKALDYEKQQLYLERV 173
D D N + Y + P F + TG I T++ LD E+Q ++ V
Sbjct: 1165 DPDSSSNDKLMYKITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILEV 1215
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVY 137
+G + V I+V D ND P+F + YE +PE + ++ A D DE +N ++Y
Sbjct: 1433 DGTTTILTQVFIKVIDTNDHRPQFSTSKYEVVIPEDTAPETEILQISAVDQDE-KNKLIY 1491
Query: 138 YSVPEDIP-----FVVDANTGDIRTNKALDYE 164
P F +D TG + T++ LD+E
Sbjct: 1492 TLQSSRDPLSLKKFRLDPATGSLYTSEKLDHE 1523
>gi|397506036|ref|XP_003823543.1| PREDICTED: protocadherin Fat 1 [Pan paniscus]
Length = 4588
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 17/132 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI-- 76
L +M+VK TD DSG +G V Y ++++ Y N LD T + I
Sbjct: 2507 LHTLVMEVKTTDGDSGIYGHVTYHIVNDFAKDRFYINERGQIFTLEKLDRETPAEKVISV 2566
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEG 131
+D GG + TVN+ +TD ND P+F++ YE ++ G +V +V A+DADEG
Sbjct: 2567 RLMAKDAGGKVAFCTVNVILTDDNDNAPQFRATKYEVNIGSSAAKGTSVIKVLASDADEG 2626
Query: 132 QNAVVYYSVPED 143
NA + Y++ D
Sbjct: 2627 SNADITYAIEAD 2638
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 75/160 (46%), Gaps = 23/160 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G ++QV ATD D + Y LL + A F L+P T E Q
Sbjct: 3039 GKLILQVSATDADIRSNAEITYTLLGS---GAEKFKLNPDTGELKTSTPLDREEQAVYHL 3095
Query: 78 -----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D GG A+V + + D+ND PEF + PY +V E + G + RV ATDAD G
Sbjct: 3096 LVRATDGGGRFCQASVVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDADAG 3155
Query: 132 QNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
N + YS+ + D F ++ +G I+ K LD E Q +Y
Sbjct: 3156 LNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVY 3195
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 29/176 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
++ ++ DK E+ ++QV+ATDKD G G V Y +L +TD F++D T
Sbjct: 827 YFVEVSEDK-EVHSEIIQVEATDKDLGPNGHVTYSIL-TDTDT---FSIDSVTGVVRIAR 881
Query: 71 --------EHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
EH I+ +E L ST V + + D+ND P F Y V E
Sbjct: 882 PLDRELQHEHYLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTFIPPNYRVKVREDLP 941
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
+G + + A D D GQ+ V YS+ + + F VD +G +R + LD+EK+Q+Y
Sbjct: 942 EGTVIMWLEAHDPDLGQSGQVRYSLLDHGEGNFDVDKLSGAVRIVQPLDFEKKQVY 997
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKN 99
D+ SG+ L + LD+ T F++ QD+ + ++ V+I+V D ND +
Sbjct: 2754 DRQSGRLKL--EKSLDHETTKWYQFSILARC-----TQDDHEMVASVDVSIQVKDANDNS 2806
Query: 100 PEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI------PFVVDANT 152
P F+S PYE F V G V ++ A+DAD G N V YS+ + F ++ T
Sbjct: 2807 PVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMET 2866
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G I T K LD+EK+ Y +V
Sbjct: 2867 GWITTLKELDHEKRDNYQIKV 2887
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 25/169 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--------TDAASYF---NLD 67
YGA + +G ++QV A +D + Y ++ N + + F NLD
Sbjct: 3235 YGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLD 3294
Query: 68 PATEHQGPIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--- 118
+ H+ + E GG LS ATVN+ VTDIND P F Y + E D +
Sbjct: 3295 YESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISE--DAVLEQ 3352
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
+V V A DAD N+ ++YS+ + F +D G+++ K LD E
Sbjct: 3353 SVITVMADDADGPSNSHIHYSIIDGNQGSSFTIDPVRGEVKVTKLLDRE 3401
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 23/160 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV+ATD DS + Y++ N++ + +F++D +T
Sbjct: 2288 YAATLSEASVIGTSVVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRT 2347
Query: 71 -------EHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
+H ++ +GG LSS V + VTD+ND P F+ YE + E G
Sbjct: 2348 LDYEQSRQHTIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPHGH 2407
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
V V A DAD + YS+ + FV+D+ TG I
Sbjct: 2408 FVTCVKAYDADSSDIDKLQYSILSGNDHKHFVIDSATGII 2447
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 75/172 (43%), Gaps = 21/172 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + E G L +V+ATD D+G + Y L+D+ S L + + P+
Sbjct: 3130 YAITVFENTEPGTLLTRVQATDADAGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDR 3189
Query: 78 -------------DEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAV 120
D+G L++T TV + V DIND P F+ Y +V E G V
Sbjct: 3190 ELQAVYTLSLKAVDQGLPRRLTATGTVVVSVLDINDNPPVFEYREYGATVSEDILVGTEV 3249
Query: 121 GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V+A D NA + YS+ E F +D+ TG + + LDYE Y
Sbjct: 3250 LQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEY 3301
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 57/135 (42%), Gaps = 2/135 (1%)
Query: 37 KATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIN 96
KA + G F + R NT + D T ++ + + V ++V D N
Sbjct: 84 KAEEYILGDFCFLRIRTKGGNTAILNREVKDHYTLIVKALEKNTNVEARTKVRVQVLDTN 143
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGD 154
D P F Y S+PE ++ RV ATDAD G N YYS + F + +G
Sbjct: 144 DLRPLFSPTSYSVSLPENTAIRTSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGV 203
Query: 155 IRTNKALDYEKQQLY 169
I LDY + +LY
Sbjct: 204 IVLTGRLDYLETKLY 218
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVY 137
+G SS A V ++V D ND +P + Y + PE G + +V ATDAD NA +
Sbjct: 3000 DGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTTPEDVLPGKLILQVSATDADIRSNAEIT 3059
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ F ++ +TG+++T+ LD E+Q +Y
Sbjct: 3060 YTLLGSGAEKFKLNPDTGELKTSTPLDREEQAVY 3093
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE 142
++ V ++V N PEF Y+ + E G V + A D DEG+N V YS+
Sbjct: 445 ASTKVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYSIAN 504
Query: 143 --DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSY 183
+PF +D TG + T++ LDYE + RV+ + A+ +
Sbjct: 505 LNHVPFAIDHFTGAVSTSENLDYE----LMPRVYTLRIRASDW 543
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 19/173 (10%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQGPIQD 78
G ++ +G +++ + TD D+G G + Y + N D+ +++ + P+
Sbjct: 723 GIQVKENQPVGSSVIFMNTTDLDTGFNGKLVYAISGGNEDSCFMIDMETGMLKILSPLDR 782
Query: 79 EG-------------GLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VG 121
E G+ A +++ V D ND PEF Y V E ++ + +
Sbjct: 783 ETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSEDKEVHSEII 842
Query: 122 RVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYLERV 173
+V ATD D G N V YS+ D F +D+ TG +R + LD E Q + ++
Sbjct: 843 QVEATDKDLGPNGHVTYSILTDTDTFSIDSVTGVVRIARPLDRELQHEHYLKI 895
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 69/160 (43%), Gaps = 24/160 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE-------------HQGPI--- 76
++Q+ A D+D K L+ + + F LDPAT HQ +
Sbjct: 1475 ILQISAVDQDE-KNKLIYTLQSSRDPLSLKKFRLDPATGSLYTSEKLDHEAVHQHTLTVM 1533
Query: 77 ---QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
QD + A + + V+D ND P F + Y+ V E G V +V A D D+G+
Sbjct: 1534 VRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVTALDKDKGK 1593
Query: 133 NAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
NA V YS+ F++D G I+T K LD Q Y
Sbjct: 1594 NAEVLYSIESGNIGNSFMIDPVLGSIKTAKELDRSNQAEY 1633
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 75/173 (43%), Gaps = 36/173 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLD--------------------- 67
G ++Q++A+D DSG G V Y L + + F ++
Sbjct: 2825 GSRVIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQ 2884
Query: 68 ---PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRV 123
A++H IQ LSSTA V++ VTD+ND P F + Y+ +V E G + +
Sbjct: 2885 IKVVASDHGEKIQ----LSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSEDDPPGGVIAIL 2940
Query: 124 HATDAD-EGQNAVVYYSVPEDIP---FVVD--ANTGDIRTNKALDYEKQQLYL 170
TDAD E N V Y + P F V+ N + K LD EK+ YL
Sbjct: 2941 STTDADSEEINRQVTYFITGGDPLGQFAVENIQNEWKVYVKKPLDREKRDNYL 2993
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 34/178 (19%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-- 70
TS+ ++Y + + + V+++Q++A D DS + Y++ N +F++ P T
Sbjct: 1139 TSEPVYYPEIMENSPK-DVSVVQIEAFDPDSSSNDKLMYKITSGNPQG--FFSIHPKTGL 1195
Query: 71 --------------EH--QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH + + D G S+ A V +++ D ND P+F Y+ +P
Sbjct: 1196 ITTTSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLP 1255
Query: 113 EGQ--DGLAVGR------VHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNK 159
E + D GR V ATD DEG NA V YS+ E F ++ TG + +
Sbjct: 1256 EREKPDRERNGRREPLYRVIATDKDEGPNAEVSYSIEDGNEHGKFFIEPKTGVVSCKR 1313
Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 74/176 (42%), Gaps = 34/176 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + +G ++QV A DKD GK V Y + N + F +DP G I+
Sbjct: 1567 YKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSIESGNI--GNSFMIDPVL---GSIKT 1621
Query: 78 -------------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
D+G +S +V I VT ++ +P+F S Y + E
Sbjct: 1622 AKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASPKFTSKEYSVELSETVS 1681
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
G VG V A Q++VVY + F ++ ++G I T KALD+E +Y
Sbjct: 1682 IGSFVGMVTA----HSQSSVVYEIKDGNTGDAFDINPHSGTISTQKALDFETLPIY 1733
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 34/178 (19%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
+L Y A+ + E+G + V A D+DSG+ G V Y L +++ +F + P E
Sbjct: 2083 NLPYYAVVKVDTEVGHVIRYVTAVDRDSGRNGEVHYYLKEHH----EHFQIGPLGEISLK 2138
Query: 76 IQ-----------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
Q D G + +A V + +T +N P F+ Y + E
Sbjct: 2139 KQFELDTLNKEYLVTVVAKDGGNPAFSAEVIVPITVMNKAMPVFEKPFYSAEIAENI--- 2195
Query: 119 AVGRVHA----TDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+VH+ A+ + V+YS+ + P F ++ NTG I LD+E Y
Sbjct: 2196 ---QVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAPLDFEAHPAY 2250
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G + V+I V DIND +P F Y ++ E G +V +V ATD+D N + Y
Sbjct: 2262 GAHAEVFVDIIVEDINDNSPVFAQQSYAATLSEASVIGTSVVQVRATDSDSEPNRGISYQ 2321
Query: 140 V-----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ F VD++TG I + LDYE+ + +
Sbjct: 2322 MFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQH 2356
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 30/171 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDN---------------------NTDAASYFNLD 67
+G +M V A D+D+G+ G + Y + D + ++ S++ L
Sbjct: 1049 VGSLVMTVSAHDEDAGRDGEIRYSIRDGSGVGVFKIGEETGVIETSDRLDRESTSHYWLT 1108
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
QG + LSS + I V D+ND P+ Y + E ++V ++ A
Sbjct: 1109 VFATDQGVVP----LSSFIEIYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAF 1164
Query: 127 DADEGQNAVVYYSVPEDIP---FVVDANTGDI-RTNKALDYEKQQLYLERV 173
D D N + Y + P F + TG I T++ LD E+Q ++ V
Sbjct: 1165 DPDSSSNDKLMYKITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILEV 1215
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVY 137
+G + V I+V D ND P+F + YE +PE + ++ A D DE +N ++Y
Sbjct: 1433 DGTTTILTQVFIKVIDTNDHRPQFSTSKYEVVIPEDTAPETEILQISAVDQDE-KNKLIY 1491
Query: 138 YSVPEDIP-----FVVDANTGDIRTNKALDYE 164
P F +D TG + T++ LD+E
Sbjct: 1492 TLQSSRDPLSLKKFRLDPATGSLYTSEKLDHE 1523
>gi|47059046|ref|NP_060109.2| protocadherin-23 isoform 1 [Homo sapiens]
gi|74762378|sp|Q6V1P9.1|PCD23_HUMAN RecName: Full=Protocadherin-23; AltName: Full=Cadherin-27; AltName:
Full=Cadherin-like protein CDHJ; AltName:
Full=Cadherin-like protein VR8; AltName: Full=Protein
dachsous homolog 2; AltName: Full=Protocadherin PCDHJ
gi|38049487|gb|AAR10443.1| cadherin protein [Homo sapiens]
Length = 2916
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 31/184 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA-------- 69
F A ++ +G + + A D D G+ G V Y +L N + F LD +
Sbjct: 1168 FPNAHVKEDVTVGSLVHHITAHDPDEGRNGKVTYSILSGNENMT--FMLDESSGLLTTTC 1225
Query: 70 -------TEHQGPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
T+H + D+G LSS+ T+ + V D+ND+ P F+ YE SV E Q+ G
Sbjct: 1226 PLDYEMKTQHILTVLALDDGTPALSSSQTLTVTVLDVNDEAPVFKQHLYEASVKENQNPG 1285
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLE 171
V RV A D D G N+ + + + +P F ++++TG++ T LD E Q+++
Sbjct: 1286 EFVTRVEALDRDSGVNSKLQFEI---MPGASFELFEINSDTGEVVTTTILDREIQEVFTL 1342
Query: 172 RVFL 175
RV +
Sbjct: 1343 RVLV 1346
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 29/180 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------- 68
+L+Y + R+ E+G ++ + A DKD G G EY L D +A+ F +DP
Sbjct: 1480 TLYYQSSVREDAEVGTVVLVLSAVDKDEGLNGQTEYFLTD---EASGAFTIDPMSGTLKT 1536
Query: 69 ---------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYE-FSVP 112
A IQ G S+T + + VTD+ND +P + P++ F P
Sbjct: 1537 SNTLDREARSQHTFSAVARDCSIQ--GSRSTTVIIKVYVTDVNDNDPVLEQNPFDVFLSP 1594
Query: 113 EGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLE 171
E V A D D G N V +S E F +D TG+I+ + E ++L+
Sbjct: 1595 ESPTNQTTVIVRADDLDLGPNGTVVFSFAETQSMFSIDKYTGEIQFQQNPSSEYFPIWLQ 1654
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 81/175 (46%), Gaps = 27/175 (15%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA-------------SYF 64
Y A + ++QV ATD DSG GL+EY +L N + A +
Sbjct: 1791 IYQASVSESQLYNAHVIQVFATDLDSGLNGLIEYSILSGNQEEAFQIDALSGVITTKAIL 1850
Query: 65 NLDPATEHQGPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD---G 117
+ + + + +Q D+G LS+T + ++VTDIND P F LP E +V +D G
Sbjct: 1851 DYELTSSYSLIVQATDKGMPRLSNTTVIKVQVTDINDNAPAF--LPSE-AVEITEDSLPG 1907
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ V V D D +A ++ E P F +D NTG + K LD+E+ Y
Sbjct: 1908 VIVTHVSVHDVDLN-SAFIFSFAKESNPGTKFAIDQNTGVVVLVKTLDFEEMTEY 1961
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSG-----KFGLV---EYRLLDNNTDAASYFN---L 66
Y A ++ G + +V+A D+DSG +F ++ + L + N+D L
Sbjct: 1273 LYEASVKENQNPGEFVTRVEALDRDSGVNSKLQFEIMPGASFELFEINSDTGEVVTTTIL 1332
Query: 67 DPATEH----QGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
D + + ++D G LSST T+ V D ND PEF Y+ V E Q+ V
Sbjct: 1333 DREIQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEFIVSSYDIEVLENQEPEVV 1392
Query: 121 GRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEK 165
V A+D D G N V Y + + D F ++ +G++ T +ALD E+
Sbjct: 1393 YTVLASDMDAGNNRAVEYHIIDGNTDECFTINEMSGELSTTRALDREQ 1440
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 56/115 (48%), Gaps = 16/115 (13%)
Query: 71 EHQGP------IQDEGGLSSTAT--VNIRVTDINDKNPEF-QSLP---YEFSVPEGQD-G 117
EH+G + D G AT V + VTDIND P F Q LP V EGQ
Sbjct: 800 EHRGHHEMTVLVTDRGSPPRNATMAVYVSVTDINDNRPFFPQCLPGKELHVKVLEGQPVN 859
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ V V A D DEG NA V YSV + F +DAN G+IRT L Y+ + Y
Sbjct: 860 MLVTTVFAKDPDEGNNAEVTYSVSSEDSSDHFKIDANNGEIRTTTILSYDYRPSY 914
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 25/189 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--TDAASY----FNLDPATE- 71
+ + + + T+ + A D D+G +G + Y ++ T SY F +DP T
Sbjct: 2319 FSCIVPENLPISSTICSINALDFDAGPYGELTYSIVSPCFLTHGMSYDHDLFLIDPLTGD 2378
Query: 72 -HQGPI---------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-G 114
H I +D+G +++ V + + I++ P F Y F++PE
Sbjct: 2379 IHAKQILDYENGNKYCLTVQAKDKGDATASLVVWVDIEGIDEFEPIFTQDQYFFTLPEKN 2438
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEKQQLYLERV 173
+D +GRV A+DAD G + V+ YS+ PF V+ G+I +AL K QL E
Sbjct: 2439 KDRQLIGRVEASDADAGIDGVILYSLGTSSPFFSVNKTNGNIYLIRALPLIKSQLNKEDT 2498
Query: 174 FLISKFATS 182
+ A S
Sbjct: 2499 LEMKIIAHS 2507
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
LSSTA ++I+V D+ND P F SL Y V E G + V A D D G +A + Y++
Sbjct: 2190 LSSTAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGSHITVVSANDRDTGSHAEIIYNI 2249
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEK 165
E F ++ NTG + K LDYEK
Sbjct: 2250 ISGNEKGHFYLEENTGVLYLIKPLDYEK 2277
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 30/156 (19%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------------- 82
V A+D D+G VEY ++D NTD N E G + L
Sbjct: 1395 VLASDMDAGNNRAVEYHIIDGNTDECFTIN-----EMSGELSTTRALDREQISNFTLVIL 1449
Query: 83 ---------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQ 132
SS + +RV D ND +P F +L Y+ SV E + G V + A D DEG
Sbjct: 1450 CSDLGDPPRSSVIHLQVRVLDANDHSPSFPTLYYQSSVREDAEVGTVVLVLSAVDKDEGL 1509
Query: 133 NAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQ 166
N Y + ++ F +D +G ++T+ LD E +
Sbjct: 1510 NGQTEYFLTDEASGAFTIDPMSGTLKTSNTLDREAR 1545
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 79/178 (44%), Gaps = 45/178 (25%)
Query: 18 FYGAM---ARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN--NTDAASYFNLDPATEH 72
+GA+ +++++ V +V A+D DSG +G +EY L D + +A F +DP H
Sbjct: 58 LWGAIVFRSQEENAKPVKETEVTASDADSGLYGFIEYSLYDGFLSYEAPQAFRIDP---H 114
Query: 73 QGPI---QD------------------------------EGGLSSTATVNIRVTDINDKN 99
G I QD +GGLS+ A V + + D+ND +
Sbjct: 115 DGQICVSQDIDRERDPATYDLLVEAKDGDEQRMTHLALVKGGLSAQAFVRVDLEDVNDNH 174
Query: 100 PEFQSLPYEFSVP-EGQDGLAVGRVHATDADEG-QNAVVYYSVPEDIP--FVVDANTG 153
P F Y S+ E Q G + V ATD D G V Y +P ++ F +D+ TG
Sbjct: 175 PVFNPSTYVTSISDETQPGTEIINVLATDQDSGIYGTVAYELIPGNVSSLFTIDSTTG 232
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---PED 143
T I + D+ND NP F S P + G V + A D DEG+N V YS+ E+
Sbjct: 1150 TAQIVILDVNDHNPTFISFPNAHVKEDVTVGSLVHHITAHDPDEGRNGKVTYSILSGNEN 1209
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
+ F++D ++G + T LDYE + ++ V +
Sbjct: 1210 MTFMLDESSGLLTTTCPLDYEMKTQHILTVLAL 1242
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 70/183 (38%), Gaps = 30/183 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF----------- 64
SL Y ++ LG + V A D+D+G + Y ++ N Y
Sbjct: 2212 SLSYHTHVKESTPLGSHITVVSANDRDTGSHAEIIYNIISGNEKGHFYLEENTGVLYLIK 2271
Query: 65 --NLDPATEHQGPIQD---EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
+ + T+ +Q E S A V + V D ND P+F + VPE
Sbjct: 2272 PLDYEKMTKFTLTVQASDAEKKHFSFAVVFVSVLDDNDHAPQFMFSSFSCIVPENLPISS 2331
Query: 119 AVGRVHATDADEGQNAVVYYSV------------PEDIPFVVDANTGDIRTNKALDYEKQ 166
+ ++A D D G + YS+ D+ F++D TGDI + LDYE
Sbjct: 2332 TICSINALDFDAGPYGELTYSIVSPCFLTHGMSYDHDL-FLIDPLTGDIHAKQILDYENG 2390
Query: 167 QLY 169
Y
Sbjct: 2391 NKY 2393
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPE 142
S+ VNI V D+ND +P F E + + G A+ A D D G+N ++ YS+
Sbjct: 462 SSTEVNITVMDVNDNHPAFLRTSDEIRISQTTPPGTALYLARAEDRDSGRNGLIRYSIAS 521
Query: 143 DIP--FVVDANTGDIRTNKALDYEKQQ 167
P F +D G + N +L +Q+
Sbjct: 522 PQPGVFAIDRALGVLFLNGSLGAGEQR 548
>gi|338729309|ref|XP_003365866.1| PREDICTED: protocadherin-11 X-linked-like isoform 2 [Equus
caballus]
Length = 1026
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 81/174 (46%), Gaps = 26/174 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
F + + G L ++ ATD DSG+ + Y L DA S FNLD T
Sbjct: 470 FISLSVPENNSPGTQLTKISATDADSGRNAEISYLL---GIDAPSEFNLDRRTGILTAVK 526
Query: 71 ----EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--QD 116
E Q +D G L++ ATV + V D ND +P F Y F VPE +
Sbjct: 527 KLDREKQEKYSFTVLAKDNGIPPLTTNATVLVTVLDQNDNSPIFTHNEYNFYVPENLPRH 586
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLY 169
G VG + TD D G+N+ V S+ + + F +D TG I+ N + D EKQ+ Y
Sbjct: 587 G-TVGLITVTDPDYGENSAVTLSILDVNDDFTIDPQTGVIQPNISFDREKQESY 639
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+ ++ + ++V D ND P F SVPE G + ++ ATDAD G+NA + Y +
Sbjct: 446 LNQSSMLLVKVKDENDNAPVFTQPFISLSVPENNSPGTQLTKISATDADSGRNAEISYLL 505
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
D P F +D TG + K LD EKQ+ Y
Sbjct: 506 GIDAPSEFNLDRRTGILTAVKKLDREKQEKY 536
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 65/153 (42%), Gaps = 36/153 (23%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ-------------- 77
T+ + TD D G+ V +LD N D F +DP T G IQ
Sbjct: 588 TVGLITVTDPDYGENSAVTLSILDVNDD----FTIDPQT---GVIQPNISFDREKQESYT 640
Query: 78 -----DEGGL---SSTATVNIRVTDINDKNPEF----QSLPYEFSVPEGQDGLAVGRVHA 125
++GG SSTA V I V D+ND P F + YE +P G V V A
Sbjct: 641 FYVKAEDGGRVSRSSTAKVTINVVDVNDNKPVFVVPSSNYSYELVLPSTNPGTVVFTVVA 700
Query: 126 TDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
D D G NA + YS+ F++D TG+I
Sbjct: 701 VDNDTGMNAELRYSIVGGNTKGLFIIDQTTGNI 733
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 10/98 (10%)
Query: 78 DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
++GG SSTA + + V D ND P F+ E S+PE G +V ++HATDAD G+N
Sbjct: 222 EDGGFPQRSSTAILQVSVADTNDNRPVFKENEIEVSIPENAPVGTSVTQLHATDADIGEN 281
Query: 134 AVV--YYS-VPEDIP---FVVDANTGDIRTNKALDYEK 165
A + Y+S + +I F ++ TG I + LD E+
Sbjct: 282 AKIQFYFSNLVSNIAKRLFHLNTTTGLITIKEPLDREE 319
>gi|395537667|ref|XP_003770815.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1
[Sarcophilus harrisii]
Length = 2651
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 76/159 (47%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQ-- 73
+G +++ ++A D+D+ ++ Y+L NT + LD E Q
Sbjct: 649 VGSSVLTLQARDRDANS--VITYQLTSGNTRNRFALSSQSGGGLITLALPLDYKQERQYV 706
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
G +G S TA V I VTD N P FQS Y SV E Q G ++ + ATD D G
Sbjct: 707 LGVTASDGTRSHTAQVFINVTDANTHRPVFQSSHYTVSVREDQPVGTSIATISATDEDTG 766
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + +P F + +TG I T LDYE Q Y
Sbjct: 767 ENARITYVLEDPVPQFRIHPDTGTIVTLMELDYEDQAAY 805
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 82/180 (45%), Gaps = 28/180 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y R+ E+G ++ ++ATD D+ + YRLL+ A F +DP +
Sbjct: 310 YRETVRENLEVGYEVLTIRATDGDAPSNANMRYRLLEG---ADGAFEIDPRSGVVRTRSV 366
Query: 71 -------EHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QD 116
E+Q ++ + G S+TATV I V D ND P+F Y VPE
Sbjct: 367 VDREEVAEYQLLVEANDQGRNPGPRSATATVRILVEDENDNYPQFSEKRYVVRVPEDVAV 426
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ V ATD D+GQNA ++YS+ F + + +G + LD+E + Y R+
Sbjct: 427 NTPILWVQATDRDQGQNAALHYSIVSGNLKGQFYLHSLSGGLDVINPLDFEAIREYTLRI 486
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 78/171 (45%), Gaps = 34/171 (19%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQGPIQDE 79
++ V+ATD+D G+ + Y ++ N Y + + E+ I+ +
Sbjct: 430 ILWVQATDRDQGQNAALHYSIVSGNLKGQFYLHSLSGGLDVINPLDFEAIREYTLRIKAQ 489
Query: 80 GG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
G ++S+ VN++V D+ND P F S P++ +V E G +V + A DAD G+N
Sbjct: 490 DGGRPPLINSSGLVNVQVLDVNDNAPIFVSSPFQAAVLENVPLGHSVLHIQAVDADSGEN 549
Query: 134 AVVYYSVPE---------------DIPFVVDANTGDIRTNKALDYEKQQLY 169
A ++Y + + D PF + ++G I LD E+ + Y
Sbjct: 550 ARLHYRLVDVTTGAGADADASARTDFPFQIHNSSGWITVCAELDREEVEHY 600
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 27/165 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDP---ATEHQGPI----QDE 79
G +++++A D D G+ G + Y+ L D ++ YF+++P A P+ +D
Sbjct: 213 GTPVIELRAQDPDEGEAGRLTYQMEALFDERSNG--YFHIEPDTGAVTTSRPLDRETKDT 270
Query: 80 GGLSSTAT------------VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
L TA + + V+D ND +P F+ + Y +V E + G V + AT
Sbjct: 271 HVLKVTAVDHGSPQRSGATYLTVTVSDTNDHSPVFEQVEYRETVRENLEVGYEVLTIRAT 330
Query: 127 DADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
D D NA + Y + E D F +D +G +RT +D E+ Y
Sbjct: 331 DGDAPSNANMRYRLLEGADGAFEIDPRSGVVRTRSVVDREEVAEY 375
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 28/187 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y R+ +G ++ + ATD+D+G+ + Y L D F + P T
Sbjct: 738 SSHYTVSVREDQPVGTSIATISATDEDTGENARITYVL----EDPVPQFRIHPDTGTIVT 793
Query: 71 ------EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E Q +D G S T ++ I + D ND P F Y+ SV E
Sbjct: 794 LMELDYEDQAAYTLAITARDNGIPQKSDTTSLEILILDANDNVPHFLRDFYQGSVFEDAP 853
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
+V +V ATD D G N + Y+ D F ++ +G IRT + LD E +Y
Sbjct: 854 PSTSVLQVSATDRDSGPNGRLLYTFQGGEDGDGDFYIEPTSGVIRTQRRLDRENVAVYNL 913
Query: 172 RVFLISK 178
R + +
Sbjct: 914 RALAVDR 920
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 76/177 (42%), Gaps = 37/177 (20%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGG------- 81
LG +++ ++A D DSG+ + YRL+D T A + + T+ I + G
Sbjct: 532 LGHSVLHIQAVDADSGENARLHYRLVDVTTGAGADADASARTDFPFQIHNSSGWITVCAE 591
Query: 82 ----------------------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
+SS+A+V I V D+ND +P F YE + E G
Sbjct: 592 LDREEVEHYRFGVEAMDHGSPVMSSSASVAITVLDVNDNDPVFTQPVYELRLNEDATVGS 651
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGD--IRTNKALDYEKQQLYL 170
+V + A D D N+V+ Y + F + + +G I LDY++++ Y+
Sbjct: 652 SVLTLQARDRDA--NSVITYQLTSGNTRNRFALSSQSGGGLITLALPLDYKQERQYV 706
Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 99 NPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP------EDIPFVVDAN 151
+P+FQ Y+ SVPE + G V + A D DEG+ + Y + + F ++ +
Sbjct: 194 SPQFQLPSYQVSVPENEPAGTPVIELRAQDPDEGEAGRLTYQMEALFDERSNGYFHIEPD 253
Query: 152 TGDIRTNKALDYEKQQLYLERV 173
TG + T++ LD E + ++ +V
Sbjct: 254 TGAVTTSRPLDRETKDTHVLKV 275
>gi|195022843|ref|XP_001985650.1| GH17186 [Drosophila grimshawi]
gi|193899132|gb|EDV97998.1| GH17186 [Drosophila grimshawi]
Length = 4534
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 82/175 (46%), Gaps = 26/175 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF-------------N 65
Y ++ +L + +V ATDKD G ++Y L N+D YF N
Sbjct: 3023 YRVSIQEDAQLQTLVTKVHATDKDFGMNRKIKYSLTGTNSD---YFGISKSTGIIKLEKN 3079
Query: 66 LDPAT----EHQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGL 118
LD T ++D G LSS A + I + DIND PEF Y+ + E G
Sbjct: 3080 LDRETISLYNFTVKVEDFGKPILSSVANIVINILDINDNPPEFSLRQYKSHMYENVTRGS 3139
Query: 119 AVGRVHATDADEGQNA-VVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
V ++HAT D G NA ++YY + E F ++++TG + N +DYEK + Y
Sbjct: 3140 EVCKIHATSKDIGVNAEILYYIISGNEQQKFNINSSTGVLWVNGTVDYEKSKFYF 3194
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Query: 76 IQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQ 132
++D G LS+ A V I V D+ND P F Y F V E G V + A D D Q
Sbjct: 803 VKDRGSPVLSTEAIVYILVDDVNDNAPIFGVQEYMFKVREDVPRGTVVAVIEAIDKDLAQ 862
Query: 133 NAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
NA + +S+ ED F +D ++G IRT LDYE +Q++
Sbjct: 863 NAEILFSLKEDTQEKNLFKIDKHSGAIRTEGYLDYENRQVH 903
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 26/154 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------------EH--QG 74
++Q+KA D D + Y ++ N YF++DP T EH +
Sbjct: 1063 IIQLKAVDPDIDPSQKITYSIISGN--LVGYFDIDPNTGVLKTTERKLDRENQAEHILEV 1120
Query: 75 PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEG 131
I D G L+ST V + V DIND +P F Y+ VP ++ +VHA D D+G
Sbjct: 1121 SISDNGSPILTSTTRVVVSVLDINDNSPVFDQRVYKVQVPSTTYINESIFQVHAIDNDDG 1180
Query: 132 QNAVVYYSV---PEDIPFVVDANTGDIRTNKALD 162
+N + YS+ + F +D+ +G I + K L+
Sbjct: 1181 ENGRITYSIKSGKKKNKFRIDSYSGHIFSTKPLE 1214
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 22/157 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LDPATEHQGPIQ---- 77
++++K +D D GK+ LV ++ N N LD T+ +
Sbjct: 270 VIRLKVSDPDLGKYALVYLEVVGGNEGGEFRINPDSGMLYTQKRLDAETKSSYTLTVSAI 329
Query: 78 ---DEGGLS-STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQ 132
D G S+A V I V D+ND +P F+++ + E + G V ++ A D D G+
Sbjct: 330 DQADVGSRKQSSAKVKITVEDMNDNDPIFENINRIIYINENELAGSIVTKLTAKDKDSGE 389
Query: 133 NAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQ 167
NA + YS+ ++PF +D +G I+T +DYE +
Sbjct: 390 NAYISYSIANLNEVPFEIDHFSGVIKTTNLIDYETMR 426
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 29/166 (17%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL----- 82
+LG T+ ++A D+D G G + + + D + D S F +DP + G +Q G L
Sbjct: 637 QLGTTVAVIEARDRDLGYNGKLVFAIADGDFD--SVFRIDPDS---GELQIIGYLDRERL 691
Query: 83 -----------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVH 124
S + + I +TD ND P Q + E G V H
Sbjct: 692 SEYILNITVYDLGHPAKSDSKILPITITDANDNPPVLQKSLATLRLTENAPKGSIVYCAH 751
Query: 125 ATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
ATDAD G NA + YS+ + F ++ TG I +K+LD E + Y
Sbjct: 752 ATDADVGINAEITYSLSVEFKEFTINKTTGCIVLSKSLDREHKDKY 797
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDI 144
T++++V D ND +P F Y +VPE ++ +V A DAD G N +YYS D
Sbjct: 18 TTIHVQVLDRNDLSPLFYPTEYAVTVPEDTPKHHSILKVIADDADLGVNGEIYYSFLIDS 77
Query: 145 -PFVVDANTGDIRTNKALDYEKQQLY 169
F V TGDI K L+Y + Y
Sbjct: 78 ESFAVHPTTGDITILKQLNYAENSHY 103
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 71/163 (43%), Gaps = 22/163 (13%)
Query: 33 LMQVKATDKDSGK------------FGLVEYRL--LDNNTDAASYFNLDPATEHQ--GPI 76
+MQ+ ATD+D K L +R+ + N + + ++H +
Sbjct: 1376 IMQLHATDRDEDKKLFYHLHATQDPSSLTLFRIDSISGNVIVTQKLDFEKTSQHILIAFV 1435
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
+D+G G + A + + V D ND PEF + PE G + +V A D D GQN
Sbjct: 1436 KDQGTPGKRNYAKIIVNVHDHNDHYPEFTRKIIQSKAPESAAIGSKLVQVTAIDRDSGQN 1495
Query: 134 AVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
A ++YS+ F +D G + +LD K Q Y+ ++
Sbjct: 1496 AEIHYSIITGNVGSMFEIDPKFGIVYLAASLDINKMQEYMLQI 1538
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L + A V I VTD ND P+F + Y V E + +A + +V ATDAD G N V Y
Sbjct: 2688 LFAYAEVYIHVTDENDNYPKFDNTIYSCEVAENTEKVASILKVTATDADTGSNGDVRYYF 2747
Query: 141 PEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERVF 174
E+ F +D TG I +LD E Q Y +V
Sbjct: 2748 DEESNGIRSIFDIDIYTGWITLLSSLDREVQSEYNLKVI 2786
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 13/99 (13%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRV---------HATDADEGQN 133
S V + V D+ND P+F Y ++ E + G V +V +A DAD G N
Sbjct: 1648 SHQNVIVHVLDVNDNVPKFLQTEYIGTLSESANLGSYVQKVDEKKRHLTVNAFDADVGLN 1707
Query: 134 AVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
++ Y + +D+ F +D+ TG I ++LDYEK+ Y
Sbjct: 1708 GMLQYKILDDLAKNVFKIDSTTGAIEILRSLDYEKKSNY 1746
Score = 42.4 bits (98), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS 139
G+ + ++I V D+ND PE +S Y ++PE G + +++ATD D G N + Y
Sbjct: 2168 GIYADVLLSITVIDVNDCYPEIESDNYNITLPENTPFGSQILQINATDLDSGANGKLSYF 2227
Query: 140 VPEDI-------PFVVDANTGDIRTNKALDYEKQQ 167
+ E I F +D + G + LDYE ++
Sbjct: 2228 I-ESIDGRNDSDTFYIDVSEGSLYLKTPLDYELKR 2261
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 69/167 (41%), Gaps = 25/167 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQDE------- 79
G + ++ AT KD G + Y ++ N FN++ +T G + E
Sbjct: 3138 GSEVCKIHATSKDIGVNAEILYYIISGNEQQK--FNINSSTGVLWVNGTVDYEKSKFYFL 3195
Query: 80 ------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
GG S+ A VNI + D+ND P F Y SV E L + V ATD D
Sbjct: 3196 TVQAIDGGSPPFSNIAYVNITIEDVNDNTPTFTQNIYRTSVREDISVNLPIIDVKATDED 3255
Query: 130 EGQNAVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLYLERV 173
N ++ Y++ + F ++ + G I + LD E Y+ V
Sbjct: 3256 SNLNGIIKYNIVKGDSLSQFRINHSNGTISLARPLDRETISDYVLEV 3302
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQDGLAV-GRVHATDADEGQNAVVYYSVPED----I 144
I+V D ND P+F Y ++ E D +V ++HATD DE + + +D
Sbjct: 1345 IQVVDTNDNAPQFTKEIYHVNISENIDEESVIMQLHATDRDEDKKLFYHLHATQDPSSLT 1404
Query: 145 PFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
F +D+ +G++ + LD+EK ++ F+
Sbjct: 1405 LFRIDSISGNVIVTQKLDFEKTSQHILIAFV 1435
Score = 40.0 bits (92), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPEDI 144
+V I V DIND P F ++PY SV G G + +V A D D +N V Y + +
Sbjct: 1970 TSVYISVLDINDNCPMFVNMPYYASVSVGFTKGTIILKVKAIDLDSAENGEVRYELKKGN 2029
Query: 145 P--FVVDANTGDIRTNKALD 162
F +D TG++ + ++
Sbjct: 2030 GELFKIDRKTGELSIKQTIE 2049
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 73/178 (41%), Gaps = 25/178 (14%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---- 70
D+ Y + E ++++V ATD D+G G V Y + + S F++D T
Sbjct: 2709 DNTIYSCEVAENTEKVASILKVTATDADTGSNGDVRYYFDEESNGIRSIFDIDIYTGWIT 2768
Query: 71 ---EHQGPIQDEGGLSSTAT------------VNIRVTDINDKNPEFQSLPYE--FSVPE 113
+Q E L AT V+I++ D ND P+F+ LP + +
Sbjct: 2769 LLSSLDREVQSEYNLKVIATDNGHPKHDSKVPVSIKIIDYNDNGPQFK-LPMDHIYISET 2827
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLY 169
G + + D D + + YY + D F + TG++ ++ LD E+ Y
Sbjct: 2828 ALPGTVLVNLLLIDPDIEKQTLDYYIISGDRQSQFQI-GKTGELFISRPLDREEVSFY 2884
Score = 36.2 bits (82), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 55/138 (39%), Gaps = 18/138 (13%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
Y R+ + + ++ VKATD+DS G+++Y ++ ++ + N T
Sbjct: 3231 IYRTSVREDISVNLPIIDVKATDEDSNLNGIIKYNIVKGDSLSQFRINHSNGTISLARPL 3290
Query: 78 DEGGLS-----------------STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
D +S ++ VNI + D ND P F Y + E + G
Sbjct: 3291 DRETISDYVLEVQACDFGIPERCNSVQVNICILDANDNAPIFSQTNYSIVLQENRPLGYV 3350
Query: 120 VGRVHATDADEGQNAVVY 137
+ +DADE N+ Y
Sbjct: 3351 FIKFDVSDADEEPNSTPY 3368
>gi|440902400|gb|ELR53197.1| Protocadherin alpha-4, partial [Bos grunniens mutus]
Length = 1081
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 83/174 (47%), Gaps = 38/174 (21%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT--EHQGPIQ------------------ 77
A+D D G+ L+ YRL N YF+L+ + E + P++
Sbjct: 144 ASDADIGENTLLTYRLTPNE-----YFSLEVPSNDEQEKPLELVLKKRLDREVASELLLV 198
Query: 78 ---DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE 130
+GG L+ T +NI V D ND P F + + E ++G + R++A+D DE
Sbjct: 199 LKATDGGKPELTGTVKINITVLDANDNAPVFDKAVHRIKLLENARNGTLIIRLNASDLDE 258
Query: 131 GQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N + YS D+ F +D+N+G+IR N +D+E+ +L+ ++ + K
Sbjct: 259 GSNGHILYSFATDVSSNTEASFRIDSNSGEIRVNGKIDFEETKLWKLQIEAVDK 312
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 57/95 (60%), Gaps = 8/95 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE--GQDGLAVGRVHATDADEGQNAVVYYS 139
L+ T + +RV DIND +PEF+ Y+ + E ++ L + +++ATD DEG N V YS
Sbjct: 803 LTGTVELFVRVLDINDNDPEFEQSEYKVRLMENAAKETLVI-QLNATDQDEGVNGEVTYS 861
Query: 140 V----PEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+ P+ P F +D N G+++ N LDYE+ + Y
Sbjct: 862 LMSIKPKGKPLFTLDENNGEVKVNGTLDYEENKFY 896
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 11/103 (10%)
Query: 77 QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQN 133
+D G LS+TA+V++ V D+ND P F Y V E G + V A DAD +N
Sbjct: 415 KDRGSPSLSTTASVSVEVADVNDNAPVFAQPEYTVFVKENNPPGCHIFTVSARDADAQEN 474
Query: 134 AVVYYSVPED-------IPFV-VDANTGDIRTNKALDYEKQQL 168
A+VYYS+ E +V V A +G + + LD+E+ +L
Sbjct: 475 ALVYYSLVERRVGERAMSSYVSVHAESGKVYALQPLDHEELEL 517
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 62/159 (38%), Gaps = 32/159 (20%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL---------- 82
++Q+ ATD+D G G V Y L+ F LD E+ G ++ G L
Sbjct: 842 VIQLNATDQDEGVNGEVTYSLMSIKPKGKPLFTLD---ENNGEVKVNGTLDYEENKFYEI 898
Query: 83 ------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDAD 129
+ TV + + D ND +PE V E Q + + D D
Sbjct: 899 EVQATDKGNPPMAGHCTVWVEILDANDNSPEITVTSLSLPVREDTQPSTVIALISVFDRD 958
Query: 130 EGQNAVVYY----SVPEDI--PFVVDANTGDIRTNKALD 162
G N V +VP I PF V TG+I T +ALD
Sbjct: 959 SGDNGQVICFLTPNVPFKIVTPFRVGLYTGEISTTRALD 997
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 70/169 (41%), Gaps = 34/169 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---LDNNTDAASYFNLDPATEHQGPIQDEGGLS--- 83
G ++++ A+D D G G + Y + +NT+A+ F +D + G I+ G +
Sbjct: 245 GTLIIRLNASDLDEGSNGHILYSFATDVSSNTEAS--FRID---SNSGEIRVNGKIDFEE 299
Query: 84 -------------------STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRV 123
TV I V DIND PE S+PE G + +
Sbjct: 300 TKLWKLQIEAVDKGNPPMFGHCTVLIEVLDINDNAPELLVTSLLLSIPEDAPLGTVITLI 359
Query: 124 HATDADEGQNAVVYYSVPEDIPFVVDA---NTGDIRTNKALDYEKQQLY 169
TD D G NA V S+ +PF++ + N + + +LD EK Y
Sbjct: 360 SVTDRDVGSNAQVTCSLTPHVPFILVSTFKNYYSLVLDSSLDREKVSEY 408
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 67/179 (37%), Gaps = 35/179 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------------NTDAASYFN 65
Y ++ + G + V A D D+ + LV Y L++ + ++ +
Sbjct: 447 YTVFVKENNPPGCHIFTVSARDADAQENALVYYSLVERRVGERAMSSYVSVHAESGKVYA 506
Query: 66 LDPA-------TEHQGPIQDEG--GLSSTATVNIRVTDINDKNPEF--------QSLPYE 108
L P + Q +D G L S T+ + V D ND P S +
Sbjct: 507 LQPLDHEELELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPALLPPGPGGGTSAVSQ 566
Query: 109 FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALD 162
G V +V A DAD G NA + Y + PF V TG+I T +ALD
Sbjct: 567 VVSRSVDAGHVVAKVRAVDADSGYNAWLSYELQLAAGGARSPFRVGLYTGEISTTRALD 625
>gi|354500181|ref|XP_003512179.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-11-like
[Cricetulus griseus]
Length = 652
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 68/135 (50%), Gaps = 13/135 (9%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIND 97
A +K+SG+ L+EY LD T SY + AT D GGL +TV I+V D+ND
Sbjct: 255 AINKNSGEIRLIEY--LDFET-TESYSIIVKAT-------DRGGLFGKSTVRIQVIDVND 304
Query: 98 KNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDA---NTGD 154
+PE + VPE V D D G+N+ + S+PED+PFV+ + N
Sbjct: 305 NSPEIAVSSFISPVPENSPDTLVMIFSIQDKDSGENSRMVCSIPEDLPFVLKSSIENYYH 364
Query: 155 IRTNKALDYEKQQLY 169
+ T ALD E + Y
Sbjct: 365 LETEGALDRESRAEY 379
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 9/100 (9%)
Query: 79 EGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNA 134
+GG+ S TA V + V DIND +PEF+ + YE +PE G V A D D G N
Sbjct: 178 DGGIPPKSGTALVRVEVIDINDNSPEFEHMFYEVKIPENSILGSLVITASAWDLDSGING 237
Query: 135 VVYYS---VPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
V Y+ EDI F ++ N+G+IR + LD+E + Y
Sbjct: 238 EVSYTFSHASEDIQKTFAINKNSGEIRLIEYLDFETTESY 277
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS- 139
L++ T+ ++V+D+ND P F Y V E L +G + ATD+D G NA + YS
Sbjct: 393 LTTQHTITVQVSDVNDNAPSFTQTSYTLFVQENNSPALHIGTISATDSDSGSNAHITYSL 452
Query: 140 VPEDIP-------FVVDANTGDIRTNKALDYEKQQLY 169
+P P ++A+ G + +ALDYE Q +
Sbjct: 453 LPTHDPQLALSSLISINADNGQLFALRALDYEALQTF 489
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVH-ATDADEGQNAVVYYSVPEDIPF 146
V ++V DIND +P F +PE AV + ATD D G NAV Y + + F
Sbjct: 81 VELQVRDINDNSPVFLEKEMVLEIPENSPVGAVFLLESATDLDVGTNAVKNYVISQSSHF 140
Query: 147 VVDANTG-------DIRTNKALDYEKQQ 167
+ ++ +KALDYE+++
Sbjct: 141 HITIRVNPDGRKYPELVLDKALDYEEER 168
>gi|307194561|gb|EFN76853.1| Cadherin-related tumor suppressor [Harpegnathos saltator]
Length = 3259
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 77/169 (45%), Gaps = 24/169 (14%)
Query: 23 ARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ----- 77
A+DK +G +L + G G + +D+N S FNLDP T +
Sbjct: 4 AKDKDTIG-SLTYTLVPNHRPGSHG--RFDTMDDNYGTESQFNLDPTTGRLSLAEALDRE 60
Query: 78 -----------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHA 125
D+G + I+VTD ND P FQS Y F VPE G VG++ A
Sbjct: 61 TKEKYLLRVRADDGLQHRDIVLTIQVTDTNDNAPTFQSTAYSFDVPEDVLRGSRVGQIVA 120
Query: 126 TDAD-EGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYL 170
TDAD EG N+ + Y + D F ++ NTG +LDYE+ Q Y+
Sbjct: 121 TDADAEGPNSQLSYVLISDWANDVFSLNPNTGVFTLTASLDYEQMQHYI 169
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 76/157 (48%), Gaps = 21/157 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+M +KA D+D G+ G VEY L +N++ + ++D GP+ +D
Sbjct: 327 VMSIKAVDRDEGRNGYVEYSL-ENDSLPFTLGSVDGLLRVSGPLDREQTSNYTLQVIAKD 385
Query: 79 EGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAV 135
G SS+ V + V D ND +P F Y +V E G +V +V A D DEG N
Sbjct: 386 RGDPPRSSSIPVTVTVLDENDNSPVFDPKQYSATVAENASIGASVLQVSAMDRDEGANGR 445
Query: 136 VYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V YS+ ++ F + + G IR K L++E++ Y
Sbjct: 446 VRYSIAKGDDNRDFTISEDGGVIRVAKNLNFERKPRY 482
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 79/160 (49%), Gaps = 20/160 (12%)
Query: 30 GVTLMQVKATDKDSGKFG-LVEYRLLDNNTD-------AASYFNLDP-----ATEHQGPI 76
G ++QVKA D D+ + V Y L + +TD F L P +E+ +
Sbjct: 537 GGFVIQVKAYDADTPPYNDQVRYFLKEGDTDLFRINASTGDIFLLRPLDREVMSEYTLTL 596
Query: 77 --QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D G L+ + V I V D+ND +PEF Y+ ++ E G V ++HATD DEG
Sbjct: 597 VAMDTGSPPLTGSGIVKIIVLDVNDHSPEFARQNYKATMLENMPAGTWVTKLHATDKDEG 656
Query: 132 QNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
NA + YS+ D F VD +TGD+ T LD E+ +Y
Sbjct: 657 LNAKIRYSLFGDKVERFYVDPDTGDVSTMMPLDREQTAVY 696
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 75/164 (45%), Gaps = 18/164 (10%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL------------LDNNTDAASYFN 65
+ + E+G ++++ ++D D G+ V Y L N A + +
Sbjct: 1045 LFSVNVTENSEIGTFVIRITSSDLDIGQNANVSYSFTYNPGRKFSIDALSGNVTVAGHLD 1104
Query: 66 LDPATEHQGPI-QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRV 123
+ E+ I +G + + I + D ND PEF Y F PE Q +A VG+V
Sbjct: 1105 REEQDEYLLKIVAVDGAWRAETALTITIQDQNDNFPEFDETTYRFHFPELQPAMAHVGQV 1164
Query: 124 HATDAD-EGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYE 164
A D D +G N+ + YS+ P D+ F VD TGD+ + + L Y+
Sbjct: 1165 TAIDRDKQGPNSAISYSLLQPSDL-FTVDPATGDVFSKRTLRYK 1207
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 75/170 (44%), Gaps = 28/170 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEY----------------------RLLDNNTDAASYFNL 66
+G ++ V A D DSG G V Y RLL N + +NL
Sbjct: 217 IGTPVLTVTAQDLDSGDNGRVVYAVVGGDDDGDFVVASNGTLLTHRLL--NRERKPLYNL 274
Query: 67 DPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHA 125
+ P+ LSST V + + D+ND +PEF S P + S+ E V + A
Sbjct: 275 -VLSATDSPLPPARPLSSTVQVTVVLLDVNDMSPEFIS-PTKISIIENAPSNTVVMSIKA 332
Query: 126 TDADEGQNAVVYYSVPED-IPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
D DEG+N V YS+ D +PF + + G +R + LD E+ Y +V
Sbjct: 333 VDRDEGRNGYVEYSLENDSLPFTLGSVDGLLRVSGPLDREQTSNYTLQVI 382
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 77/166 (46%), Gaps = 25/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF-----------NLDPATEHQGPI 76
E+G ++ V+ATD+DSG+ G V Y + ++ D +LD T+++ +
Sbjct: 1585 EVGTSVGIVQATDQDSGEDGRVYYLFVGSSNDRGFSIGAETGIIRVSRHLDRETQNRVVL 1644
Query: 77 ----QDEGGLSSTAT----VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
++ GGL T V + + D ND PEF YE +V EG D G + V A D
Sbjct: 1645 TVMAKNGGGLRGNDTDETQVIVSIQDGNDP-PEFLQSYYETTVSEGADYGTRLLTVRAID 1703
Query: 128 AD-EGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D QN YS+ F VD TGDI T K LD E +Y
Sbjct: 1704 KDIRPQNNQFSYSIIGGNIGQAFKVDPQTGDIETAKQLDRESMSMY 1749
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 76/181 (41%), Gaps = 34/181 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL--DNNTD-----------AASYFN 65
Y A + +G +++QV A D+D G G V Y + D+N D A N
Sbjct: 416 YSATVAENASIGASVLQVSAMDRDEGANGRVRYSIAKGDDNRDFTISEDGGVIRVAKNLN 475
Query: 66 LDPATEHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPY-----EFSVP 112
+ + I E S TA V I V DIND P F PY E VP
Sbjct: 476 FERKPRYYLTIHGDDCAAEVGEKSRSDTAQVTITVLDINDNAPVFLDSPYIAHVMENMVP 535
Query: 113 EGQDGLAVGRVHATDADEGQ-NAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQL 168
G G + +V A DAD N V Y + E D+ F ++A+TGDI + LD E
Sbjct: 536 PG--GFVI-QVKAYDADTPPYNDQVRYFLKEGDTDL-FRINASTGDIFLLRPLDREVMSE 591
Query: 169 Y 169
Y
Sbjct: 592 Y 592
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
LSST TV V D+ND P F++ P + E G V V A D D G N V Y+V
Sbjct: 182 LSSTVTVYCNVVDLNDNAPIFEAGPLAAEIMENATIGTPVLTVTAQDLDSGDNGRVVYAV 241
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+D FVV +N G + T++ L+ E++ LY
Sbjct: 242 VGGDDDGDFVVASN-GTLLTHRLLNRERKPLY 272
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 87/186 (46%), Gaps = 30/186 (16%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN--------------NTDA 60
++ Y A + + ++++ A D+DSG G V Y L++N +T+A
Sbjct: 939 EAAIYNATVLENEYPPLPVVKISAKDRDSGDNGQVTYYLVNNFHETFVIDISTGQIDTNA 998
Query: 61 -------ASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
ASY + A +H P L+ T TV + V D ND P F L + +V E
Sbjct: 999 RLDREEIASYELIVEARDHGHP-----HLTGTTTVLVTVLDKNDNPPHFTRL-FSVNVTE 1052
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYL 170
+ G V R+ ++D D GQNA V YS + F +DA +G++ LD E+Q YL
Sbjct: 1053 NSEIGTFVIRITSSDLDIGQNANVSYSFTYNPGRKFSIDALSGNVTVAGHLDREEQDEYL 1112
Query: 171 ERVFLI 176
++ +
Sbjct: 1113 LKIVAV 1118
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
L S + + VTD ND P ++ Y +V E + L V ++ A D D G N V Y
Sbjct: 917 ALRSVLELQVNVTDANDNAPVMEAAIYNATVLENEYPPLPVVKISAKDRDSGDNGQVTYY 976
Query: 140 VPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
+ + FV+D +TG I TN LD E+ Y
Sbjct: 977 LVNNFHETFVIDISTGQIDTNARLDREEIASY 1008
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 74/173 (42%), Gaps = 23/173 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN----------TDAASY---FN 65
Y + + T++ V A D DSG G+V Y++ N T A + +
Sbjct: 1365 YQVRVPENEPVNTTILTVSAVDGDSGPNGMVRYKISAGNERNEFFVHSITGAVTILEPLD 1424
Query: 66 LDPATEHQGPI--QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ--DGLA 119
D E++ I D G + AT+ + V+DIND P F Y +PE D
Sbjct: 1425 YDMVQEYRLNITATDLGFEPRQAVATLTVNVSDINDNPPTFNQSVYHAYLPENSPLDSF- 1483
Query: 120 VGRVHATDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLY 169
V +V A D D + AVV Y + F + NTG+I + + +YE+ Y
Sbjct: 1484 VYKVVARDIDSPKYAVVQYKILGGNGMDHFRIHENTGEITSEISFNYEEANEY 1536
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 72/175 (41%), Gaps = 25/175 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + G + ++ ATDKD G + Y L D F +DP
Sbjct: 631 YKATMLENMPAGTWVTKLHATDKDEGLNAKIRYSLFG---DKVERFYVDPDTGDVSTMMP 687
Query: 69 ------ATEHQGPIQDEGGLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
A H + + + AT + I V D+ND P F S Y +P G G
Sbjct: 688 LDREQTAVYHLTLLAQDSSPTERATAVKLTIYVQDVNDNAPHFSSPRYTAYLPTGTHLGS 747
Query: 119 AVGRVHATDADEGQNA-VVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLE 171
V A D D+G+N+ +VY + +D F +D + G IR + + E+ +L+
Sbjct: 748 FVFGAKAVDDDDGENSRIVYRLLGQDAKRFTIDFDNGVIRAAEEMIDEQITYHLQ 802
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 69/162 (42%), Gaps = 20/162 (12%)
Query: 22 MARDKHELGV------TLMQVKATDKDS--GKFGLVEYRLLDNNTDAASYFNLDPATEHQ 73
+ARD + GV +L+ V +D S + G + R + + F L +
Sbjct: 1276 IARDDADFGVNAEIDYSLVSVNGSDLFSIEERNGWLYVRKSLHGIAVGTVFLLTAVATDR 1335
Query: 74 G--PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
G P +DE T+ + ++ N P F ++ Y+ VPE + + V A D D
Sbjct: 1336 GVPPQKDE------VTLTLVISGENRHAPTFAAVSYQVRVPENEPVNTTILTVSAVDGDS 1389
Query: 131 GQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G N +V Y + E F V + TG + + LDY+ Q Y
Sbjct: 1390 GPNGMVRYKISAGNERNEFFVHSITGAVTILEPLDYDMVQEY 1431
Score = 35.8 bits (81), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 72/175 (41%), Gaps = 33/175 (18%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKD-SGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI 76
+Y + + G L+ V+A DKD + Y ++ N A F +DP T G I
Sbjct: 1681 YYETTVSEGADYGTRLLTVRAIDKDIRPQNNQFSYSIIGGNIGQA--FKVDPQT---GDI 1735
Query: 77 QDEGGL----------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
+ L + TATV+I +TD+ND P F V E
Sbjct: 1736 ETAKQLDRESMSMYDLIIGAIDIGLPPETGTATVHIELTDVNDNGPVFDPPEVIGYVSEN 1795
Query: 115 Q-DGLAVGRVHATDADEGQNAVVY-YSV---PEDIPFVVDANTGDIRTNKALDYE 164
+ G ++ + ATD D N + Y + + +D ++G +RT ++LD E
Sbjct: 1796 EPPGTSIMTLSATDPDLPPNGAPFSYRLIGGRQSNMVTLDKHSGVLRTTRSLDRE 1850
>gi|47210558|emb|CAF96423.1| unnamed protein product [Tetraodon nigroviridis]
Length = 943
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 24/145 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y AM + +G +++QV A D D +G RL+ T YF++D T
Sbjct: 89 YIAMVPEMANIGTSIIQVTARDADDPTYG-NSARLVYAITQGQDYFSVDAQTGTLRTAVP 147
Query: 71 --------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E+ +Q + GGLS T TV +++TD+ND P F+ + FSV E
Sbjct: 148 DMDRESRDEYLVVLQAKDMGGHLGGLSGTTTVTVKLTDVNDNPPHFRRSAWSFSVSELAA 207
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV 140
G+ VGR+ A+D D G+NA++ +++
Sbjct: 208 PGVEVGRLTASDPDLGENALLEFTI 232
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 50/180 (27%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL----------------------- 66
GV + ++ A+D D G+ L+E+ ++D ++ A FNL
Sbjct: 209 GVEVGRLTASDPDLGENALLEFTIMD--SEEAEIFNLTKKDKEAVIVLSKLLDYEACNSY 266
Query: 67 -----------DPATEHQGPIQDEGGLSSTATVNIRVTDIN-DKNPEFQSLPYEFSVPEG 114
DP +GP +D+ +RV +N D+ P+F + Y V E
Sbjct: 267 TFSVEVSNPIVDPRYLKKGPFKDQ--------TTVRVMVLNADEPPQFSQVRYHLDVSEN 318
Query: 115 QDGL-AVGRVHATDADEGQNAVVYYSV-PEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ +VGRV+A D D GQ++ + YS+ P+ P F + ++TG I T LD E +Q +
Sbjct: 319 CPPVCSVGRVYAVDPDTGQSSNIRYSIDPQSDPEALFRIASDTGFISTVMELDREVEQWH 378
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 22/127 (17%)
Query: 50 EYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF 109
+YRL+ TD + L+P++E IRV DIND P F + PY
Sbjct: 48 QYRLIATATDRQTGRALEPSSE----------------FIIRVQDINDNPPVFPNEPYIA 91
Query: 110 SVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP-FVVDANTGDIRTNKA-LDY 163
VPE + G ++ +V A DAD+ G +A + Y++ + F VDA TG +RT +D
Sbjct: 92 MVPEMANIGTSIIQVTARDADDPTYGNSARLVYAITQGQDYFSVDAQTGTLRTAVPDMDR 151
Query: 164 EKQQLYL 170
E + YL
Sbjct: 152 ESRDEYL 158
>gi|32880206|ref|NP_071923.2| cadherin-24 isoform 1 precursor [Homo sapiens]
gi|38257450|sp|Q86UP0.1|CAD24_HUMAN RecName: Full=Cadherin-24; Flags: Precursor
gi|30171998|gb|AAP20591.1| cadherin-24 variant [Homo sapiens]
Length = 819
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 84/185 (45%), Gaps = 31/185 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV A D D +G +L+ D +F++DP T
Sbjct: 155 YHATVPEMSNVGTSVIQVTAHDADDPSYG-NSAKLVYTVLDGLPFFSVDPQTGVVRTAIP 213
Query: 71 --------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E IQ + GGLS + TV + ++D+ND P+F Y+FSV E
Sbjct: 214 NMDRETQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAG 273
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQL 168
G VGR+ A D D G NA++ YS+ + I + G + K LD+E Q+
Sbjct: 274 PGTLVGRLRAQDPDLGDNALMAYSILDGEGSEAFSISTDLQGRDGLLTVRKPLDFESQRS 333
Query: 169 YLERV 173
Y RV
Sbjct: 334 YSFRV 338
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 63/127 (49%), Gaps = 22/127 (17%)
Query: 50 EYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF 109
+Y LL D AS L+P +E I+V DIND P F PY
Sbjct: 114 QYVLLAQAVDRASNRPLEPPSE----------------FIIKVQDINDNPPIFPLGPYHA 157
Query: 110 SVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIPFV-VDANTGDIRTN-KALDY 163
+VPE + G +V +V A DAD+ G +A + Y+V + +PF VD TG +RT +D
Sbjct: 158 TVPEMSNVGTSVIQVTAHDADDPSYGNSAKLVYTVLDGLPFFSVDPQTGVVRTAIPNMDR 217
Query: 164 EKQQLYL 170
E Q+ +L
Sbjct: 218 ETQEEFL 224
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 11/108 (10%)
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVH 124
+DPA +GP +D A+V + V D + P F Y +VPE + G VG++
Sbjct: 345 IDPAYLRRGPFKD------VASVRVAVQDAPEP-PAFTQAAYHLTVPENKAPGTLVGQIS 397
Query: 125 ATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
A D D + + Y +P P F + G I T LD E + +
Sbjct: 398 AADLDSPASPIRYSILPHSDPERCFSIQPEEGTIHTAAPLDREARAWH 445
>gi|410349159|gb|JAA41183.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
Length = 4588
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 17/132 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI-- 76
L +M+VK TD DSG +G V Y ++++ Y N LD T + I
Sbjct: 2507 LHTLVMEVKTTDGDSGIYGHVTYHIVNDFAKDRFYINERGQIFTLEKLDRETPAEKVISV 2566
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEG 131
+D GG + TVN+ +TD ND P+F++ YE ++ G +V +V A+DADEG
Sbjct: 2567 RLMAKDAGGKVAFCTVNVILTDDNDNAPQFRATKYEVNIGSSAAKGTSVIKVLASDADEG 2626
Query: 132 QNAVVYYSVPED 143
NA + Y++ D
Sbjct: 2627 SNADITYAIEAD 2638
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 75/160 (46%), Gaps = 23/160 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G ++QV ATD D + Y LL + A F L+P T E Q
Sbjct: 3039 GKLILQVSATDADIRSNAEITYTLLGS---GAEKFKLNPDTGELKTSTPLDREEQAVYHL 3095
Query: 78 -----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D GG A+V + + D+ND PEF + PY +V E + G + RV ATDAD G
Sbjct: 3096 LVRATDGGGRFCQASVVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDADAG 3155
Query: 132 QNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
N + YS+ + D F ++ +G I+ K LD E Q +Y
Sbjct: 3156 LNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVY 3195
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 29/176 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
++ ++ DK E+ ++QV+ATDKD G G V Y +L +TD F++D T
Sbjct: 827 YFVEVSEDK-EVHSEIIQVEATDKDLGPNGHVTYSIL-TDTDT---FSIDSVTGVVRIAR 881
Query: 71 --------EHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
EH I+ +E L ST V + + D+ND P F Y V E
Sbjct: 882 PLDRELQHEHYLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTFIPPNYRVKVREDLP 941
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
+G + + A D D GQ+ V YS+ + + F VD +G +R + LD+EK+Q+Y
Sbjct: 942 EGTVIMWLEAHDPDLGQSGQVRYSLLDHGEGNFDVDKLSGAVRIVQPLDFEKKQVY 997
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKN 99
D+ SG+ L + LD+ T F++ QD+ + ++ V+I+V D ND +
Sbjct: 2754 DRQSGRLKL--EKSLDHETTKWYQFSILARC-----TQDDHEMVASVDVSIQVKDANDNS 2806
Query: 100 PEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI------PFVVDANT 152
P F+S PYE F V G V ++ A+DAD G N V YS+ + F ++ T
Sbjct: 2807 PVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMET 2866
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G I T K LD+EK+ Y +V
Sbjct: 2867 GWITTLKELDHEKRDNYQIKV 2887
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 25/169 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--------TDAASYF---NLD 67
YGA + +G ++QV A +D + Y ++ N + + F NLD
Sbjct: 3235 YGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLD 3294
Query: 68 PATEHQGPIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--- 118
+ H+ + E GG LS ATVN+ VTDIND P F Y + E D +
Sbjct: 3295 YESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISE--DAVLEQ 3352
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
+V V A DAD N+ ++YS+ + F +D G+++ K LD E
Sbjct: 3353 SVITVMADDADGPSNSHIHYSIIDGNQGSSFTIDPVRGEVKVTKLLDRE 3401
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 23/160 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV+ATD DS + Y++ N++ + +F++D +T
Sbjct: 2288 YAATLSEASVIGTSVVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRT 2347
Query: 71 -------EHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
+H ++ +GG LSS V + VTD+ND P F+ YE + E G
Sbjct: 2348 LDYEQSRQHTIFVRAVDGGMPPLSSDMIVTVDVTDLNDNPPLFEQQIYEARISEHAPHGH 2407
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
V V A DAD + YS+ + FV+D+ TG I
Sbjct: 2408 FVTCVKAYDADSSDIDKLQYSILSGNDHKHFVIDSATGII 2447
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 75/172 (43%), Gaps = 21/172 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + E G L +V+ATD D+G + Y L+D+ S L + + P+
Sbjct: 3130 YAITVFENTEPGTLLTRVQATDADAGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDR 3189
Query: 78 -------------DEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAV 120
D+G L++T TV + V DIND P F+ Y +V E G V
Sbjct: 3190 ELQAVYTLSLKAVDQGLPRRLTATGTVVVSVLDINDNPPVFEYREYGATVSEDILVGTEV 3249
Query: 121 GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V+A D NA + YS+ E F +D+ TG + + LDYE Y
Sbjct: 3250 LQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEY 3301
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 57/135 (42%), Gaps = 2/135 (1%)
Query: 37 KATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIN 96
KA + G F + R NT + D T ++ + + V ++V D N
Sbjct: 84 KAEEYILGDFCFLRIRTKGGNTAILNREVKDHYTLIVKALEKNTNVEARTKVRVQVLDTN 143
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGD 154
D P F Y S+PE ++ RV ATDAD G N YYS + F + +G
Sbjct: 144 DLRPLFSPTSYSVSLPENTAIRTSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGV 203
Query: 155 IRTNKALDYEKQQLY 169
I LDY + +LY
Sbjct: 204 IVLTGRLDYLETKLY 218
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVY 137
+G SS A V ++V D ND +P + Y + PE G + +V ATDAD NA +
Sbjct: 3000 DGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTTPEDVLPGKLILQVSATDADIRSNAEIT 3059
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ F ++ +TG+++T+ LD E+Q +Y
Sbjct: 3060 YTLLGSGAEKFKLNPDTGELKTSTPLDREEQAVY 3093
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE 142
++ V ++V N PEF Y+ + E G V + A D DEG+N V YS+
Sbjct: 445 ASTKVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYSIAN 504
Query: 143 --DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSY 183
+PF +D TG + T++ LDYE + RV+ + A+ +
Sbjct: 505 LNHVPFAIDHFTGAVSTSENLDYE----LMPRVYTLRIRASDW 543
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 19/173 (10%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQGPIQD 78
G ++ +G +++ + TD D+G G + Y + N D+ +++ + P+
Sbjct: 723 GIQVKENQPVGSSVIFMNTTDLDTGFNGKLVYAISGGNEDSCFMIDMETGMLKILSPLDR 782
Query: 79 EG-------------GLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VG 121
E G+ A +++ V D ND PEF Y V E ++ + +
Sbjct: 783 ETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSEDKEVHSEII 842
Query: 122 RVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYLERV 173
+V ATD D G N V YS+ D F +D+ TG +R + LD E Q + ++
Sbjct: 843 QVEATDKDLGPNGHVTYSILTDTDTFSIDSVTGVVRIARPLDRELQHEHYLKI 895
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 69/160 (43%), Gaps = 24/160 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE-------------HQGPI--- 76
++Q+ A D+D K L+ + + F LDPAT HQ +
Sbjct: 1475 ILQISAVDQDE-KNKLIYTLQSSRDPLSLKKFRLDPATGSLYTSEKLDHEAVHQHTLTVM 1533
Query: 77 ---QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
QD + A + + V+D ND P F + Y+ V E G V +V A D D+G+
Sbjct: 1534 VRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVTALDKDKGK 1593
Query: 133 NAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
NA V YS+ F++D G I+T K LD Q Y
Sbjct: 1594 NAEVLYSIESGNIGNSFMIDPVLGSIKTAKELDRSNQAEY 1633
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 75/173 (43%), Gaps = 36/173 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLD--------------------- 67
G ++Q++A+D DSG G V Y L + + F ++
Sbjct: 2825 GSRVIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQ 2884
Query: 68 ---PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRV 123
A++H IQ LSSTA V++ VTD+ND P F + Y+ +V E G + +
Sbjct: 2885 IKVVASDHGEKIQ----LSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSEDDPPGGVIAIL 2940
Query: 124 HATDAD-EGQNAVVYYSVPEDIP---FVVD--ANTGDIRTNKALDYEKQQLYL 170
TDAD E N V Y + P F V+ N + K LD EK+ YL
Sbjct: 2941 STTDADSEEINRQVTYFITGGDPLGQFAVENIQNEWKVYVKKPLDREKRDNYL 2993
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 34/178 (19%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-- 70
TS+ ++Y + + + V+++Q++A D DS + Y++ N +F++ P T
Sbjct: 1139 TSEPVYYPEIMENSPK-DVSVVQIEAFDPDSSSNDKLMYKITSGNPQG--FFSIHPKTGL 1195
Query: 71 --------------EH--QGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH + + D G S+ A V +++ D ND P+F Y+ +P
Sbjct: 1196 ITTTSRKLDREQQDEHILEVTVTDNGIPPKSTIARVIVKILDENDNKPQFLQKFYKIRLP 1255
Query: 113 EGQD--------GLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNK 159
E + + RV ATD DEG NA + YS+ E F ++ TG + + +
Sbjct: 1256 EREKPDRERNARREPLYRVIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTGVVSSKR 1313
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 74/176 (42%), Gaps = 34/176 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + +G ++QV A DKD GK V Y + N + F +DP G I+
Sbjct: 1567 YKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSIESGNI--GNSFMIDPVL---GSIKT 1621
Query: 78 -------------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
D+G +S +V I VT ++ +P+F S Y + E
Sbjct: 1622 AKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASPKFTSKEYSVELSETVS 1681
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
G VG V A Q++VVY + F ++ ++G I T KALD+E +Y
Sbjct: 1682 IGSFVGMVTA----HSQSSVVYEIKDGNTGDAFDINPHSGTISTQKALDFETLPIY 1733
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 34/178 (19%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
+L Y A+ + E+G + V A D+DSG+ G V Y L +++ +F + P E
Sbjct: 2083 NLPYYAVVKVDTEVGHVIRYVTAVDRDSGRNGEVHYYLKEHH----EHFQIGPLGEISLK 2138
Query: 76 IQ-----------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
Q D G + +A V + +T +N P F+ Y + E
Sbjct: 2139 KQFELDTLNKEYLVTVVAKDGGNPAFSAEVIVPITVMNKAMPVFEKPFYSAEIAENI--- 2195
Query: 119 AVGRVHA----TDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+VH+ A+ + V+YS+ + P F ++ NTG I LD+E Y
Sbjct: 2196 ---QVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAPLDFEAHPAY 2250
Score = 39.3 bits (90), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G + V+I V DIND P F Y ++ E G +V +V ATD+D N + Y
Sbjct: 2262 GAHAEVFVDIIVEDINDNPPVFAQQSYAATLSEASVIGTSVVQVRATDSDSEPNRGISYQ 2321
Query: 140 V-----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ F VD++TG I + LDYE+ + +
Sbjct: 2322 MFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQH 2356
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 30/171 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDN---------------------NTDAASYFNLD 67
+G +M V A D+D+G+ G + Y + D + ++ S++ L
Sbjct: 1049 VGSLVMTVSAHDEDAGRDGEIRYSIRDGSGVGVFKIGEETGVIETSDRLDRESTSHYWLT 1108
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
QG + LSS + I V D+ND P+ Y + E ++V ++ A
Sbjct: 1109 VFATDQGVVP----LSSFIEIYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAF 1164
Query: 127 DADEGQNAVVYYSVPEDIP---FVVDANTGDI-RTNKALDYEKQQLYLERV 173
D D N + Y + P F + TG I T++ LD E+Q ++ V
Sbjct: 1165 DPDSSSNDKLMYKITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILEV 1215
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVY 137
+G + V I+V D ND P+F + YE +PE + ++ A D DE +N ++Y
Sbjct: 1433 DGTTTILTQVFIKVIDTNDHRPQFSTSKYEVVIPEDTAPETEILQISAVDQDE-KNKLIY 1491
Query: 138 YSVPEDIP-----FVVDANTGDIRTNKALDYE 164
P F +D TG + T++ LD+E
Sbjct: 1492 TLQSSRDPLSLKKFRLDPATGSLYTSEKLDHE 1523
>gi|410304872|gb|JAA31036.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
Length = 4588
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 17/132 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI-- 76
L +M+VK TD DSG +G V Y ++++ Y N LD T + I
Sbjct: 2507 LHTLVMEVKTTDGDSGIYGHVTYHIVNDFAKDRFYINERGQIFTLEKLDRETPAEKVISV 2566
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEG 131
+D GG + TVN+ +TD ND P+F++ YE ++ G +V +V A+DADEG
Sbjct: 2567 RLMAKDAGGKVAFCTVNVILTDDNDNAPQFRATKYEVNIGSSAAKGTSVIKVLASDADEG 2626
Query: 132 QNAVVYYSVPED 143
NA + Y++ D
Sbjct: 2627 SNADITYAIEAD 2638
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 75/160 (46%), Gaps = 23/160 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G ++QV ATD D + Y LL + A F L+P T E Q
Sbjct: 3039 GKLILQVSATDADIRSNAEITYTLLGS---GAEKFKLNPDTGELKTSTPLDREEQAVYHL 3095
Query: 78 -----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D GG A+V + + D+ND PEF + PY +V E + G + RV ATDAD G
Sbjct: 3096 LVRATDGGGRFCQASVVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDADAG 3155
Query: 132 QNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
N + YS+ + D F ++ +G I+ K LD E Q +Y
Sbjct: 3156 LNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVY 3195
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 29/176 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
++ ++ DK E+ ++QV+ATDKD G G V Y +L +TD F++D T
Sbjct: 827 YFVEVSEDK-EVHSEIIQVEATDKDLGPNGHVTYSIL-TDTDT---FSIDSVTGVVRIAR 881
Query: 71 --------EHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
EH I+ +E L ST V + + D+ND P F Y V E
Sbjct: 882 PLDRELQHEHYLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTFIPPNYRVKVREDLP 941
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
+G + + A D D GQ+ V YS+ + + F VD +G +R + LD+EK+Q+Y
Sbjct: 942 EGTVIMWLEAHDPDLGQSGQVRYSLLDHGEGNFDVDKLSGAVRIVQPLDFEKKQVY 997
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKN 99
D+ SG+ L + LD+ T F++ QD+ + ++ V+I+V D ND +
Sbjct: 2754 DRQSGRLKL--EKSLDHETTKWYQFSILARC-----TQDDHEMVASVDVSIQVKDANDNS 2806
Query: 100 PEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI------PFVVDANT 152
P F+S PYE F V G V ++ A+DAD G N V YS+ + F ++ T
Sbjct: 2807 PVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMET 2866
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G I T K LD+EK+ Y +V
Sbjct: 2867 GWITTLKELDHEKRDNYQIKV 2887
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 25/169 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--------TDAASYF---NLD 67
YGA + +G ++QV A +D + Y ++ N + + F NLD
Sbjct: 3235 YGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLD 3294
Query: 68 PATEHQGPIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--- 118
+ H+ + E GG LS ATVN+ VTDIND P F Y + E D +
Sbjct: 3295 YESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISE--DAVLEQ 3352
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
+V V A DAD N+ ++YS+ + F +D G+++ K LD E
Sbjct: 3353 SVITVMADDADGPSNSHIHYSIIDGNQGSSFTIDPVRGEVKVTKLLDRE 3401
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 23/160 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV+ATD DS + Y++ N++ + +F++D +T
Sbjct: 2288 YAATLSEASVIGTSVVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRT 2347
Query: 71 -------EHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
+H ++ +GG LSS V + VTD+ND P F+ YE + E G
Sbjct: 2348 LDYEQSRQHTIFVRAVDGGMPPLSSDMIVTVDVTDLNDNPPLFEQQIYEARISEHAPHGH 2407
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
V V A DAD + YS+ + FV+D+ TG I
Sbjct: 2408 FVTCVKAYDADSSDIDKLQYSILSGNDHKHFVIDSATGII 2447
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 75/172 (43%), Gaps = 21/172 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + E G L +V+ATD D+G + Y L+D+ S L + + P+
Sbjct: 3130 YAITVFENTEPGTLLTRVQATDADAGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDR 3189
Query: 78 -------------DEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAV 120
D+G L++T TV + V DIND P F+ Y +V E G V
Sbjct: 3190 ELQAVYTLSLKAVDQGLPRRLTATGTVVVSVLDINDNPPVFEYREYGATVSEDILVGTEV 3249
Query: 121 GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V+A D NA + YS+ E F +D+ TG + + LDYE Y
Sbjct: 3250 LQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEY 3301
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 57/135 (42%), Gaps = 2/135 (1%)
Query: 37 KATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIN 96
KA + G F + R NT + D T ++ + + V ++V D N
Sbjct: 84 KAEEYILGDFCFLRIRTKGGNTAILNREVKDHYTLIVKALEKNTNVEARTKVRVQVLDTN 143
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGD 154
D P F Y S+PE ++ RV ATDAD G N YYS + F + +G
Sbjct: 144 DLRPLFSPTSYSVSLPENTAIRTSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGV 203
Query: 155 IRTNKALDYEKQQLY 169
I LDY + +LY
Sbjct: 204 IVLTGRLDYLETKLY 218
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVY 137
+G SS A V ++V D ND +P + Y + PE G + +V ATDAD NA +
Sbjct: 3000 DGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTTPEDVLPGKLILQVSATDADIRSNAEIT 3059
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ F ++ +TG+++T+ LD E+Q +Y
Sbjct: 3060 YTLLGSGAEKFKLNPDTGELKTSTPLDREEQAVY 3093
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE 142
++ V ++V N PEF Y+ + E G V + A D DEG+N V YS+
Sbjct: 445 ASTKVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYSIAN 504
Query: 143 --DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSY 183
+PF +D TG + T++ LDYE + RV+ + A+ +
Sbjct: 505 LNHVPFAIDHFTGAVSTSENLDYE----LMPRVYTLRIRASDW 543
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 19/173 (10%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQGPIQD 78
G ++ +G +++ + TD D+G G + Y + N D+ +++ + P+
Sbjct: 723 GIQVKENQPVGSSVIFMNTTDLDTGFNGKLVYAISGGNEDSCFMIDMETGMLKILSPLDR 782
Query: 79 EG-------------GLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VG 121
E G+ A +++ V D ND PEF Y V E ++ + +
Sbjct: 783 ETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSEDKEVHSEII 842
Query: 122 RVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYLERV 173
+V ATD D G N V YS+ D F +D+ TG +R + LD E Q + ++
Sbjct: 843 QVEATDKDLGPNGHVTYSILTDTDTFSIDSVTGVVRIARPLDRELQHEHYLKI 895
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 69/160 (43%), Gaps = 24/160 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE-------------HQGPI--- 76
++Q+ A D+D K L+ + + F LDPAT HQ +
Sbjct: 1475 ILQISAVDQDE-KNKLIYTLQSSRDPLSLKKFRLDPATGSLYTSEKLDHEAVHQHTLTVM 1533
Query: 77 ---QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
QD + A + + V+D ND P F + Y+ V E G V +V A D D+G+
Sbjct: 1534 VRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVTALDKDKGK 1593
Query: 133 NAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
NA V YS+ F++D G I+T K LD Q Y
Sbjct: 1594 NAEVLYSIESGNIGNSFMIDPVLGSIKTAKELDRSNQAEY 1633
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 75/173 (43%), Gaps = 36/173 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLD--------------------- 67
G ++Q++A+D DSG G V Y L + + F ++
Sbjct: 2825 GSRVIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQ 2884
Query: 68 ---PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRV 123
A++H IQ LSSTA V++ VTD+ND P F + Y+ +V E G + +
Sbjct: 2885 IKVVASDHGEKIQ----LSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSEDDPPGGVIAIL 2940
Query: 124 HATDAD-EGQNAVVYYSVPEDIP---FVVD--ANTGDIRTNKALDYEKQQLYL 170
TDAD E N V Y + P F V+ N + K LD EK+ YL
Sbjct: 2941 STTDADSEEINRQVTYFITGGDPLGQFAVENIQNEWKVYVKKPLDREKRDNYL 2993
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 34/178 (19%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-- 70
TS+ ++Y + + + V+++Q++A D DS + Y++ N +F++ P T
Sbjct: 1139 TSEPVYYPEIMENSPK-DVSVVQIEAFDPDSSSNDKLMYKITSGNPQG--FFSIHPKTGL 1195
Query: 71 --------------EH--QGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH + + D G S+ A V +++ D ND P+F Y+ +P
Sbjct: 1196 ITTTSRKLDREQQDEHILEVTVTDNGIPPKSTIARVIVKILDENDNKPQFLQKFYKIRLP 1255
Query: 113 EGQD--------GLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNK 159
E + + RV ATD DEG NA + YS+ E F ++ TG + + +
Sbjct: 1256 EREKPDRERNARREPLYRVIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTGVVSSKR 1313
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 74/176 (42%), Gaps = 34/176 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + +G ++QV A DKD GK V Y + N + F +DP G I+
Sbjct: 1567 YKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSIESGNI--GNSFMIDPVL---GSIKT 1621
Query: 78 -------------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
D+G +S +V I VT ++ +P+F S Y + E
Sbjct: 1622 AKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASPKFTSKEYSVELSETVS 1681
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
G VG V A Q++VVY + F ++ ++G I T KALD+E +Y
Sbjct: 1682 IGSFVGMVTA----HSQSSVVYEIKDGNTGDAFDINPHSGTISTQKALDFETLPIY 1733
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 34/178 (19%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
+L Y A+ + E+G + V A D+DSG+ G V Y L +++ +F + P E
Sbjct: 2083 NLPYYAVVKVDTEVGHVIRYVTAVDRDSGRNGEVHYYLKEHH----EHFQIGPLGEISLK 2138
Query: 76 IQ-----------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
Q D G + +A V + +T +N P F+ Y + E
Sbjct: 2139 KQFELDTLNKEYLVTVVAKDGGNPAFSAEVIVPITVMNKAMPVFEKPFYSAEIAENI--- 2195
Query: 119 AVGRVHA----TDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+VH+ A+ + V+YS+ + P F ++ NTG I LD+E Y
Sbjct: 2196 ---QVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAPLDFEAHPAY 2250
Score = 39.3 bits (90), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G + V+I V DIND P F Y ++ E G +V +V ATD+D N + Y
Sbjct: 2262 GAHAEVFVDIIVEDINDNPPVFAQQSYAATLSEASVIGTSVVQVRATDSDSEPNRGISYQ 2321
Query: 140 V-----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ F VD++TG I + LDYE+ + +
Sbjct: 2322 MFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQH 2356
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 30/171 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDN---------------------NTDAASYFNLD 67
+G +M V A D+D+G+ G + Y + D + ++ S++ L
Sbjct: 1049 VGSLVMTVSAHDEDAGRDGEIRYSIRDGSGVGVFKIGEETGVIETSDRLDRESTSHYWLT 1108
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
QG + LSS + I V D+ND P+ Y + E ++V ++ A
Sbjct: 1109 VFATDQGVVP----LSSFIEIYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAF 1164
Query: 127 DADEGQNAVVYYSVPEDIP---FVVDANTGDI-RTNKALDYEKQQLYLERV 173
D D N + Y + P F + TG I T++ LD E+Q ++ V
Sbjct: 1165 DPDSSSNDKLMYKITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILEV 1215
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVY 137
+G + V I+V D ND P+F + YE +PE + ++ A D DE +N ++Y
Sbjct: 1433 DGTTTILTQVFIKVIDTNDHRPQFSTSKYEVVIPEDTAPETEILQISAVDQDE-KNKLIY 1491
Query: 138 YSVPEDIP-----FVVDANTGDIRTNKALDYE 164
P F +D TG + T++ LD+E
Sbjct: 1492 TLQSSRDPLSLKKFRLDPATGSLYTSEKLDHE 1523
>gi|410225470|gb|JAA09954.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
gi|410225472|gb|JAA09955.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
Length = 4588
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 17/132 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI-- 76
L +M+VK TD DSG +G V Y ++++ Y N LD T + I
Sbjct: 2507 LHTLVMEVKTTDGDSGIYGHVTYHIVNDFAKDRFYINERGQIFTLEKLDRETPAEKVISV 2566
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEG 131
+D GG + TVN+ +TD ND P+F++ YE ++ G +V +V A+DADEG
Sbjct: 2567 RLMAKDAGGKVAFCTVNVILTDDNDNAPQFRATKYEVNIGSSAAKGTSVIKVLASDADEG 2626
Query: 132 QNAVVYYSVPED 143
NA + Y++ D
Sbjct: 2627 SNADITYAIEAD 2638
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 75/160 (46%), Gaps = 23/160 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G ++QV ATD D + Y LL + A F L+P T E Q
Sbjct: 3039 GKLILQVSATDADIRSNAEITYTLLGS---GAEKFKLNPDTGELKTSTPLDREEQAVYHL 3095
Query: 78 -----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D GG A+V + + D+ND PEF + PY +V E + G + RV ATDAD G
Sbjct: 3096 LVRATDGGGRFCQASVVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDADAG 3155
Query: 132 QNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
N + YS+ + D F ++ +G I+ K LD E Q +Y
Sbjct: 3156 LNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVY 3195
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 29/176 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
++ ++ DK E+ ++QV+ATDKD G G V Y +L +TD F++D T
Sbjct: 827 YFVEVSEDK-EVHSEIIQVEATDKDLGPNGHVTYSIL-TDTDT---FSIDSVTGVVRIAR 881
Query: 71 --------EHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
EH I+ +E L ST V + + D+ND P F Y V E
Sbjct: 882 PLDRELQHEHYLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTFIPPNYRVKVREDLP 941
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
+G + + A D D GQ+ V YS+ + + F VD +G +R + LD+EK+Q+Y
Sbjct: 942 EGTVIMWLEAHDPDLGQSGQVRYSLLDHGEGNFDVDKLSGAVRIVQPLDFEKKQVY 997
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKN 99
D+ SG+ L + LD+ T F++ QD+ + ++ V+I+V D ND +
Sbjct: 2754 DRQSGRLKL--EKSLDHETTKWYQFSILARC-----TQDDHEMVASVDVSIQVKDANDNS 2806
Query: 100 PEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI------PFVVDANT 152
P F+S PYE F V G V ++ A+DAD G N V YS+ + F ++ T
Sbjct: 2807 PVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMET 2866
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G I T K LD+EK+ Y +V
Sbjct: 2867 GWITTLKELDHEKRDNYQIKV 2887
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 25/169 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--------TDAASYF---NLD 67
YGA + +G ++QV A +D + Y ++ N + + F NLD
Sbjct: 3235 YGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLD 3294
Query: 68 PATEHQGPIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--- 118
+ H+ + E GG LS ATVN+ VTDIND P F Y + E D +
Sbjct: 3295 YESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISE--DAVLEQ 3352
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
+V V A DAD N+ ++YS+ + F +D G+++ K LD E
Sbjct: 3353 SVITVMADDADGPSNSHIHYSIIDGNQGSSFTIDPVRGEVKVTKLLDRE 3401
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 23/160 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV+ATD DS + Y++ N++ + +F++D +T
Sbjct: 2288 YAATLSEASVIGTSVVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRT 2347
Query: 71 -------EHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
+H ++ +GG LSS V + VTD+ND P F+ YE + E G
Sbjct: 2348 LDYEQSRQHTIFVRAVDGGMPPLSSDMIVTVDVTDLNDNPPLFEQQIYEARISEHAPHGH 2407
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
V V A DAD + YS+ + FV+D+ TG I
Sbjct: 2408 FVTCVKAYDADSSDIDKLQYSILSGNDHKHFVIDSATGII 2447
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 75/172 (43%), Gaps = 21/172 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + E G L +V+ATD D+G + Y L+D+ S L + + P+
Sbjct: 3130 YAITVFENTEPGTLLTRVQATDADAGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDR 3189
Query: 78 -------------DEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAV 120
D+G L++T TV + V DIND P F+ Y +V E G V
Sbjct: 3190 ELQAVYTLSLKAVDQGLPRRLTATGTVVVSVLDINDNPPVFEYREYGATVSEDILVGTEV 3249
Query: 121 GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V+A D NA + YS+ E F +D+ TG + + LDYE Y
Sbjct: 3250 LQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEY 3301
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 57/135 (42%), Gaps = 2/135 (1%)
Query: 37 KATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIN 96
KA + G F + R NT + D T ++ + + V ++V D N
Sbjct: 84 KAEEYILGDFCFLRIRTKGGNTAILNREVKDHYTLIVKALEKNTNVEARTKVRVQVLDTN 143
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGD 154
D P F Y S+PE ++ RV ATDAD G N YYS + F + +G
Sbjct: 144 DLRPLFSPTSYSVSLPENTAIRTSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGV 203
Query: 155 IRTNKALDYEKQQLY 169
I LDY + +LY
Sbjct: 204 IVLTGRLDYLETKLY 218
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVY 137
+G SS A V ++V D ND +P + Y + PE G + +V ATDAD NA +
Sbjct: 3000 DGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTTPEDVLPGKLILQVSATDADIRSNAEIT 3059
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ F ++ +TG+++T+ LD E+Q +Y
Sbjct: 3060 YTLLGSGAEKFKLNPDTGELKTSTPLDREEQAVY 3093
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE 142
++ V ++V N PEF Y+ + E G V + A D DEG+N V YS+
Sbjct: 445 ASTKVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYSIAN 504
Query: 143 --DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSY 183
+PF +D TG + T++ LDYE + RV+ + A+ +
Sbjct: 505 LNHVPFAIDHFTGAVSTSENLDYE----LMPRVYTLRIRASDW 543
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 19/173 (10%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQGPIQD 78
G ++ +G +++ + TD D+G G + Y + N D+ +++ + P+
Sbjct: 723 GIQVKENQPVGSSVIFMNTTDLDTGFNGKLVYAISGGNEDSCFMIDMETGMLKILSPLDR 782
Query: 79 EG-------------GLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VG 121
E G+ A +++ V D ND PEF Y V E ++ + +
Sbjct: 783 ETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSEDKEVHSEII 842
Query: 122 RVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYLERV 173
+V ATD D G N V YS+ D F +D+ TG +R + LD E Q + ++
Sbjct: 843 QVEATDKDLGPNGHVTYSILTDTDTFSIDSVTGVVRIARPLDRELQHEHYLKI 895
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 69/160 (43%), Gaps = 24/160 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE-------------HQGPI--- 76
++Q+ A D+D K L+ + + F LDPAT HQ +
Sbjct: 1475 ILQISAVDQDE-KNKLIYTLQSSRDPLSLKKFRLDPATGSLYTSEKLDHEAVHQHTLTVM 1533
Query: 77 ---QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
QD + A + + V+D ND P F + Y+ V E G V +V A D D+G+
Sbjct: 1534 VRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVTALDKDKGK 1593
Query: 133 NAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
NA V YS+ F++D G I+T K LD Q Y
Sbjct: 1594 NAEVLYSIESGNIGNSFMIDPVLGSIKTAKELDRSNQAEY 1633
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 75/173 (43%), Gaps = 36/173 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLD--------------------- 67
G ++Q++A+D DSG G V Y L + + F ++
Sbjct: 2825 GSRVIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQ 2884
Query: 68 ---PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRV 123
A++H IQ LSSTA V++ VTD+ND P F + Y+ +V E G + +
Sbjct: 2885 IKVVASDHGEKIQ----LSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSEDDPPGGVIAIL 2940
Query: 124 HATDAD-EGQNAVVYYSVPEDIP---FVVD--ANTGDIRTNKALDYEKQQLYL 170
TDAD E N V Y + P F V+ N + K LD EK+ YL
Sbjct: 2941 STTDADSEEINRQVTYFITGGDPLGQFAVENIQNEWKVYVKKPLDREKRDNYL 2993
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 34/178 (19%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-- 70
TS+ ++Y + + + V+++Q++A D DS + Y++ N +F++ P T
Sbjct: 1139 TSEPVYYPEIMENSPK-DVSVVQIEAFDPDSSSNDKLMYKITSGNPQG--FFSIHPKTGL 1195
Query: 71 --------------EH--QGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH + + D G S+ A V +++ D ND P+F Y+ +P
Sbjct: 1196 ITTTSRKLDREQQDEHILEVTVTDNGIPPKSTIARVIVKILDENDNKPQFLQKFYKIRLP 1255
Query: 113 EGQD--------GLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNK 159
E + + RV ATD DEG NA + YS+ E F ++ TG + + +
Sbjct: 1256 EREKPDRERNARREPLYRVIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTGVVSSKR 1313
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 74/176 (42%), Gaps = 34/176 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + +G ++QV A DKD GK V Y + N + F +DP G I+
Sbjct: 1567 YKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSIESGNI--GNSFMIDPVL---GSIKT 1621
Query: 78 -------------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
D+G +S +V I VT ++ +P+F S Y + E
Sbjct: 1622 AKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASPKFTSKEYSVELSETVS 1681
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
G VG V A Q++VVY + F ++ ++G I T KALD+E +Y
Sbjct: 1682 IGSFVGMVTA----HSQSSVVYEIKDGNTGDAFDINPHSGTISTQKALDFETLPIY 1733
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 34/178 (19%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
+L Y A+ + E+G + V A D+DSG+ G V Y L +++ +F + P E
Sbjct: 2083 NLPYYAVVKVDTEVGHVVRYVTAVDRDSGRNGEVHYYLKEHH----EHFQIGPLGEISLK 2138
Query: 76 IQ-----------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
Q D G + +A V + +T +N P F+ Y + E
Sbjct: 2139 KQFELDTLNKEYLVTVVAKDGGNPAFSAEVIVPITVMNKAMPVFEKPFYSAEIAENI--- 2195
Query: 119 AVGRVHA----TDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+VH+ A+ + V+YS+ + P F ++ NTG I LD+E Y
Sbjct: 2196 ---QVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAPLDFEAHPAY 2250
Score = 39.3 bits (90), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G + V+I V DIND P F Y ++ E G +V +V ATD+D N + Y
Sbjct: 2262 GAHAEVFVDIIVEDINDNPPVFAQQSYAATLSEASVIGTSVVQVRATDSDSEPNRGISYQ 2321
Query: 140 V-----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ F VD++TG I + LDYE+ + +
Sbjct: 2322 MFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQH 2356
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 30/171 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDN---------------------NTDAASYFNLD 67
+G +M V A D+D+G+ G + Y + D + ++ S++ L
Sbjct: 1049 VGSLVMTVSAHDEDAGRDGEIRYSIRDGSGVGVFKIGEETGVIETSDRLDRESTSHYWLT 1108
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
QG + LSS + I V D+ND P+ Y + E ++V ++ A
Sbjct: 1109 VFATDQGVVP----LSSFIEIYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAF 1164
Query: 127 DADEGQNAVVYYSVPEDIP---FVVDANTGDI-RTNKALDYEKQQLYLERV 173
D D N + Y + P F + TG I T++ LD E+Q ++ V
Sbjct: 1165 DPDSSSNDKLMYKITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILEV 1215
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVY 137
+G + V I+V D ND P+F + YE +PE + ++ A D DE +N ++Y
Sbjct: 1433 DGTTTILTQVFIKVIDTNDHRPQFSTSKYEVVIPEDTAPETEILQISAVDQDE-KNKLIY 1491
Query: 138 YSVPEDIP-----FVVDANTGDIRTNKALDYE 164
P F +D TG + T++ LD+E
Sbjct: 1492 TLQSSRDPLSLKKFRLDPATGSLYTSEKLDHE 1523
>gi|348507537|ref|XP_003441312.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2
[Oreochromis niloticus]
Length = 3017
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 83/182 (45%), Gaps = 30/182 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDS-----------------------GKFGLVEYRLLD 55
Y R+ E+G ++ V+ATD D+ + G++ + L
Sbjct: 374 YKESIRENLEIGYEVLTVRATDGDAPINGNILYNILNNNGSNDVFEIDSRSGVIRTKGLV 433
Query: 56 NNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
+ + +Y L A + QG +D G S+TATV+I V D ND P+F Y VPE
Sbjct: 434 DREEVEAYMLLVEAND-QG--RDPGPRSATATVHIVVEDDNDNAPQFSEKRYVVQVPEDM 490
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
+ +V ATD D G NAVV++S+ F +DA TG + LDYE + Y
Sbjct: 491 TPNTEILQVTATDQDRGSNAVVHFSIMSGNTRGQFYIDAQTGKMDLVSHLDYEANKEYTL 550
Query: 172 RV 173
R+
Sbjct: 551 RI 552
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 78/159 (49%), Gaps = 22/159 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNT-------------DAASYFNLDPATEHQGPIQDE 79
++QV ATD+D G +V + ++ NT D S+ + + E+ I+ +
Sbjct: 496 ILQVTATDQDRGSNAVVHFSIMSGNTRGQFYIDAQTGKMDLVSHLDYEANKEYTLRIRAQ 555
Query: 80 GG----LSS-TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
G LS+ + V ++V D+ND P F S P++ +V E G ++ + A DAD G+N
Sbjct: 556 DGGRPPLSNISGLVTVQVLDVNDNAPIFVSTPFQATVLENVPLGYSIIHIQAVDADSGEN 615
Query: 134 AVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
+ + Y + E + PF ++ +TG I LD E Y
Sbjct: 616 SRLEYRLTETTPNFPFSINNSTGWIVVADELDRESVDFY 654
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPED 143
TA V + VTD N P FQS Y S+ E + G V + ATD D G+NA + Y + +
Sbjct: 773 TAKVFVNVTDANTHRPVFQSSHYTVSINEDKPVGTTVVVISATDEDTGENARITYFMDDS 832
Query: 144 IP-FVVDANTGDIRTNKALDYEKQQLY 169
IP F +D +TG + T LDYE Q Y
Sbjct: 833 IPQFDIDPDTGAVTTQMELDYEDQVSY 859
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 83/175 (47%), Gaps = 23/175 (13%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL---DNNTD---------AASYFN 65
+ GA+ D + +++QV ATD+DSG G V Y D + D +
Sbjct: 898 YVGAIMEDV-PVFTSVVQVSATDRDSGLNGRVFYTFQGGEDGDGDFIIESTSGIVRTLRR 956
Query: 66 LD----PATEHQGPIQDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQD-GL 118
LD P Q D+G + VNI+VT D+ND P F+ ++ V E GL
Sbjct: 957 LDRENVPIYTLQAFAVDKGIPALKTPVNIQVTILDVNDNPPVFEKDEFDIMVEENSPIGL 1016
Query: 119 AVGRVHATDADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
V + ATD DEG NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 1017 VVAHISATDPDEGSNAQIMYQIVEGNIPEVFQLDIFSGELTALIDLDYELRSEYV 1071
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 28/174 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEHQGPIQDEGGLSST 85
+G T++ + ATD+D+G+ + Y +D D+ F++DP A Q + E +S T
Sbjct: 805 VGTTVVVISATDEDTGENARITY-FMD---DSIPQFDIDPDTGAVTTQMELDYEDQVSYT 860
Query: 86 ATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDA 128
+ R V D+ND +P F Y ++ E +V +V ATD
Sbjct: 861 LAITARDNGIPQKSDTTYLEILVNDVNDNSPRFLRDHYVGAIMEDVPVFTSVVQVSATDR 920
Query: 129 DEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
D G N V+Y+ D F++++ +G +RT + LD E +Y + F + K
Sbjct: 921 DSGLNGRVFYTFQGGEDGDGDFIIESTSGIVRTLRRLDRENVPIYTLQAFAVDK 974
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 15/139 (10%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIND 97
A D SG VE +LD T F + A +H P + ++ AT+ I V+D ND
Sbjct: 313 AVDPSSGAVSTVE--VLDRETKDTHVFRVT-AVDHGTPRR-----TAMATLTITVSDTND 364
Query: 98 KNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV-----PEDIPFVVDAN 151
+P F+ Y+ S+ E + G V V ATD D N + Y++ D+ F +D+
Sbjct: 365 HSPVFEQQDYKESIRENLEIGYEVLTVRATDGDAPINGNILYNILNNNGSNDV-FEIDSR 423
Query: 152 TGDIRTNKALDYEKQQLYL 170
+G IRT +D E+ + Y+
Sbjct: 424 SGVIRTKGLVDREEVEAYM 442
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 35/170 (20%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNT-----------DAASYFNLD 67
LG +++ ++A D DSG+ +EYRL ++N+T ++ ++N
Sbjct: 598 LGYSIIHIQAVDADSGENSRLEYRLTETTPNFPFSINNSTGWIVVADELDRESVDFYNFG 657
Query: 68 -PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHAT 126
A +H P+ +SS+A++++ + D+ND NPEF Y + E D + V
Sbjct: 658 VEARDHGYPV-----MSSSASISMTILDVNDNNPEFTQKAYYMRLNE--DAVVGTSVVTV 710
Query: 127 DA-DEGQNAVVYYSVPED-----IPFVVDANTGDIRTNKALDYEKQQLYL 170
A D+ N+VV Y + + G I LDY+ ++ Y+
Sbjct: 711 SAVDQDINSVVTYQIASGNTRNRFSITSQSGGGLITLALPLDYKLERQYV 760
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 75/171 (43%), Gaps = 28/171 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLD 67
+ M + +G+ + + ATD D G + Y++++ N + + +LD
Sbjct: 1004 FDIMVEENSPIGLVVAHISATDPDEGSNAQIMYQIVEGNIPEVFQLDIFSGELTALIDLD 1063
Query: 68 --PATEHQGPIQDEGG-LSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQ 115
+E+ +Q L S ATV+I++ D ND P ++ F S P G
Sbjct: 1064 YELRSEYVIVVQATSAPLVSRATVHIKLVDKNDNVPVLKNFQIIFNNYVTDKSSSFPTG- 1122
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEK 165
+GR+ A D D + V ++ V ++ +TG+I+ ++ALD +
Sbjct: 1123 ---VIGRIPAYDPDVSDQLHYSFDVGNELNLVLLNQSTGEIQLSQALDNNR 1170
>gi|332820729|ref|XP_003310638.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Pan troglodytes]
Length = 4588
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 17/132 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI-- 76
L +M+VK TD DSG +G V Y ++++ Y N LD T + I
Sbjct: 2507 LHTLVMEVKTTDGDSGIYGHVTYHIVNDFAKDRFYINERGQIFTLEKLDRETPAEKVISV 2566
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEG 131
+D GG + TVN+ +TD ND P+F++ YE ++ G +V +V A+DADEG
Sbjct: 2567 RLMAKDAGGKVAFCTVNVILTDDNDNAPQFRATKYEVNIGSSAAKGTSVIKVLASDADEG 2626
Query: 132 QNAVVYYSVPED 143
NA + Y++ D
Sbjct: 2627 SNADITYAIEAD 2638
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 75/160 (46%), Gaps = 23/160 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G ++QV ATD D + Y LL + A F L+P T E Q
Sbjct: 3039 GKLILQVSATDADIRSNAEITYTLLGS---GAEKFKLNPDTGELKTSTPLDREEQAVYHL 3095
Query: 78 -----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D GG A+V + + D+ND PEF + PY +V E + G + RV ATDAD G
Sbjct: 3096 LVRATDGGGRFCQASVVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDADAG 3155
Query: 132 QNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
N + YS+ + D F ++ +G I+ K LD E Q +Y
Sbjct: 3156 LNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVY 3195
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKN 99
D+ SG+ L + LD+ T F++ QD+ + ++ V+I+V D ND +
Sbjct: 2754 DRQSGRLKL--EKSLDHETTKWYQFSILARC-----TQDDHEMVASVDVSIQVKDANDNS 2806
Query: 100 PEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI------PFVVDANT 152
P F+S PYE F V G V ++ A+DAD G N V YS+ + F ++ T
Sbjct: 2807 PVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMET 2866
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G I T K LD+EK+ Y +V
Sbjct: 2867 GWITTLKELDHEKRDNYQIKV 2887
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 25/169 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--------TDAASYF---NLD 67
YGA + +G ++QV A +D + Y ++ N + + F NLD
Sbjct: 3235 YGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLD 3294
Query: 68 PATEHQGPIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--- 118
+ H+ + E GG LS ATVN+ VTDIND P F Y + E D +
Sbjct: 3295 YESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISE--DAVLEQ 3352
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
+V V A DAD N+ ++YS+ + F +D G+++ K LD E
Sbjct: 3353 SVITVMADDADGPSNSHIHYSIIDGNQGSSFTIDPVRGEVKVTKLLDRE 3401
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 23/160 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV+ATD DS + Y++ N++ + +F++D +T
Sbjct: 2288 YAATLSEASVIGTSVVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRT 2347
Query: 71 -------EHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
+H ++ +GG LSS V + VTD+ND P F+ YE + E G
Sbjct: 2348 LDYEQSRQHTIFVRAVDGGMPPLSSDMIVTVDVTDLNDNPPFFEQQIYEARISEHAPHGH 2407
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
V V A DAD + YS+ + FV+D+ TG I
Sbjct: 2408 FVTCVKAYDADSSDIDKLQYSILSGNDHKHFVIDSATGII 2447
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 75/172 (43%), Gaps = 21/172 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + E G L +V+ATD D+G + Y L+D+ S L + + P+
Sbjct: 3130 YAITVFENTEPGTLLTRVQATDADAGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDR 3189
Query: 78 -------------DEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAV 120
D+G L++T TV + V DIND P F+ Y +V E G V
Sbjct: 3190 ELQAVYTLSLKAVDQGLPRRLTATGTVVVSVLDINDNPPVFEYREYGATVSEDILVGTEV 3249
Query: 121 GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V+A D NA + YS+ E F +D+ TG + + LDYE Y
Sbjct: 3250 LQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEY 3301
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 82/176 (46%), Gaps = 29/176 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
++ ++ DK E+ ++QV+ATDKD G G V Y +L +TD F++D T
Sbjct: 827 YFVEVSEDK-EVHSEIIQVEATDKDLGPNGHVTYSIL-TDTDT---FSIDSVTGVVRIAR 881
Query: 71 --------EHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
EH I+ +E L ST V + + D+ND P F Y V E
Sbjct: 882 PLDRELQHEHYLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTFIPPNYRVKVREDLP 941
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
+G + + A D D GQ+ V YS+ + + F D R + LD+EK+Q+Y
Sbjct: 942 EGTVIMWLEAHDPDLGQSGQVRYSLLDHGEGNFDXDKLPXAGRIVQPLDFEKKQVY 997
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 57/135 (42%), Gaps = 2/135 (1%)
Query: 37 KATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIN 96
KA + G F + R NT + D T ++ + + V ++V D N
Sbjct: 84 KAEEYILGDFCFLRIRTKGGNTAILNREVKDHYTLIVKALEKNTNVEARTKVRVQVLDTN 143
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGD 154
D P F Y S+PE ++ RV ATDAD G N YYS + F + +G
Sbjct: 144 DLRPLFSPTSYSVSLPENTAIRTSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGV 203
Query: 155 IRTNKALDYEKQQLY 169
I LDY + +LY
Sbjct: 204 IVLTGRLDYLETKLY 218
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVY 137
+G SS A V ++V D ND +P + Y + PE G + +V ATDAD NA +
Sbjct: 3000 DGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTTPEDVLPGKLILQVSATDADIRSNAEIT 3059
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ F ++ +TG+++T+ LD E+Q +Y
Sbjct: 3060 YTLLGSGAEKFKLNPDTGELKTSTPLDREEQAVY 3093
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE 142
++ V ++V N PEF Y+ + E G V + A D DEG+N V YS+
Sbjct: 445 ASTKVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYSIAN 504
Query: 143 --DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSY 183
+PF +D TG + T++ LDYE + RV+ + A+ +
Sbjct: 505 LNHVPFAIDHFTGAVSTSENLDYE----LMPRVYTLRIRASDW 543
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 19/173 (10%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQGPIQD 78
G ++ +G +++ + TD D+G G + Y + N D+ +++ + P+
Sbjct: 723 GIQVKENQPVGSSVIFMNTTDLDTGFNGKLVYAISGGNEDSCFMIDMETGMLKILSPLDR 782
Query: 79 EG-------------GLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VG 121
E G+ A +++ V D ND PEF Y V E ++ + +
Sbjct: 783 ETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSEDKEVHSEII 842
Query: 122 RVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYLERV 173
+V ATD D G N V YS+ D F +D+ TG +R + LD E Q + ++
Sbjct: 843 QVEATDKDLGPNGHVTYSILTDTDTFSIDSVTGVVRIARPLDRELQHEHYLKI 895
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 69/160 (43%), Gaps = 24/160 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE-------------HQGPI--- 76
++Q+ A D+D K L+ + + F LDPAT HQ +
Sbjct: 1475 ILQISAVDQDE-KNKLIYTLQSSRDPLSLKKFRLDPATGSLYTSEKLDHEAVHQHTLTVM 1533
Query: 77 ---QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
QD + A + + V+D ND P F + Y+ V E G V +V A D D+G+
Sbjct: 1534 VRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVTALDKDKGK 1593
Query: 133 NAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
NA V YS+ F++D G I+T K LD Q Y
Sbjct: 1594 NAEVLYSIESGNIGNSFMIDPVLGSIKTAKELDRSNQAEY 1633
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 75/173 (43%), Gaps = 36/173 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLD--------------------- 67
G ++Q++A+D DSG G V Y L + + F ++
Sbjct: 2825 GSRVIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQ 2884
Query: 68 ---PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRV 123
A++H IQ LSSTA V++ VTD+ND P F + Y+ +V E G + +
Sbjct: 2885 IKVVASDHGEKIQ----LSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSEDDPPGGVIAIL 2940
Query: 124 HATDAD-EGQNAVVYYSVPEDIP---FVVD--ANTGDIRTNKALDYEKQQLYL 170
TDAD E N V Y + P F V+ N + K LD EK+ YL
Sbjct: 2941 STTDADSEEINRQVTYFITGGDPLGQFAVENIQNEWKVYVKKPLDREKRDNYL 2993
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 34/178 (19%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-- 70
TS+ ++Y + + + V+++Q++A D DS + Y++ N +F++ P T
Sbjct: 1139 TSEPVYYPEIMENSPK-DVSVVQIEAFDPDSSSNDKLMYKITSGNPQG--FFSIHPKTGL 1195
Query: 71 --------------EH--QGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH + + D G S+ A V +++ D ND P+F Y+ +P
Sbjct: 1196 ITTTSRKLDREQQDEHILEVTVTDNGIPPKSTIARVIVKILDENDNKPQFLQKFYKIRLP 1255
Query: 113 EGQD--------GLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNK 159
E + + RV ATD DEG NA + YS+ E F ++ TG + + +
Sbjct: 1256 EREKPDRERNARREPLYRVIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTGVVSSKR 1313
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 74/176 (42%), Gaps = 34/176 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + +G ++QV A DKD GK V Y + N + F +DP G I+
Sbjct: 1567 YKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSIESGNI--GNSFMIDPVL---GSIKT 1621
Query: 78 -------------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
D+G +S +V I VT ++ +P+F S Y + E
Sbjct: 1622 AKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASPKFTSKEYSVELSETVS 1681
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
G VG V A Q++VVY + F ++ ++G I T KALD+E +Y
Sbjct: 1682 IGSFVGMVTA----HSQSSVVYEIKDGNTGDAFDINPHSGTISTQKALDFETLPIY 1733
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 34/178 (19%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
+L Y A+ + E+G + V A D+DSG+ G V Y L +++ +F + P E
Sbjct: 2083 NLPYYAVVKVDTEVGHVVRYVTAVDRDSGRNGEVHYYLKEHH----EHFQIGPLGEISLK 2138
Query: 76 IQ-----------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
Q D G + +A V + +T +N P F+ Y + E
Sbjct: 2139 KQFELDTLNKEYLVTVVAKDGGNPAFSAEVIVPITVMNKAMPVFEKPFYSAEIAENI--- 2195
Query: 119 AVGRVHA----TDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+VH+ A+ + V+YS+ + P F ++ NTG I LD+E Y
Sbjct: 2196 ---QVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAPLDFEAHPAY 2250
Score = 39.3 bits (90), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G + V+I V DIND P F Y ++ E G +V +V ATD+D N + Y
Sbjct: 2262 GAHAEVFVDIIVEDINDNPPVFAQQSYAATLSEASVIGTSVVQVRATDSDSEPNRGISYQ 2321
Query: 140 V-----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ F VD++TG I + LDYE+ + +
Sbjct: 2322 MFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQH 2356
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 30/171 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDN---------------------NTDAASYFNLD 67
+G +M V A D+D+G+ G + Y + D + ++ S++ L
Sbjct: 1049 VGSLVMTVSAHDEDAGRDGEIRYSIRDGSGVGVFKIGEETGVIETSDRLDRESTSHYWLT 1108
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
QG + LSS + I V D+ND P+ Y + E ++V ++ A
Sbjct: 1109 VFATDQGVVP----LSSFIEIYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAF 1164
Query: 127 DADEGQNAVVYYSVPEDIP---FVVDANTGDI-RTNKALDYEKQQLYLERV 173
D D N + Y + P F + TG I T++ LD E+Q ++ V
Sbjct: 1165 DPDSSSNDKLMYKITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILEV 1215
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVY 137
+G + V I+V D ND P+F + YE +PE + ++ A D DE +N ++Y
Sbjct: 1433 DGTTTILTQVFIKVIDTNDHRPQFSTSKYEVVIPEDTAPETEILQISAVDQDE-KNKLIY 1491
Query: 138 YSVPEDIP-----FVVDANTGDIRTNKALDYE 164
P F +D TG + T++ LD+E
Sbjct: 1492 TLQSSRDPLSLKKFRLDPATGSLYTSEKLDHE 1523
>gi|410267946|gb|JAA21939.1| FAT tumor suppressor homolog 1 [Pan troglodytes]
Length = 4588
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 17/132 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI-- 76
L +M+VK TD DSG +G V Y ++++ Y N LD T + I
Sbjct: 2507 LHTLVMEVKTTDGDSGIYGHVTYHIVNDFAKDRFYINERGQIFTLEKLDRETPAEKVISV 2566
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEG 131
+D GG + TVN+ +TD ND P+F++ YE ++ G +V +V A+DADEG
Sbjct: 2567 RLMAKDAGGKVAFCTVNVILTDDNDNAPQFRATKYEVNIGSSAAKGTSVIKVLASDADEG 2626
Query: 132 QNAVVYYSVPED 143
NA + Y++ D
Sbjct: 2627 SNADITYAIEAD 2638
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 75/160 (46%), Gaps = 23/160 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G ++QV ATD D + Y LL + A F L+P T E Q
Sbjct: 3039 GKLILQVSATDADIRSNAEITYTLLGS---GAEKFKLNPDTGELKTSTPLDREEQAVYHL 3095
Query: 78 -----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D GG A+V + + D+ND PEF + PY +V E + G + RV ATDAD G
Sbjct: 3096 LVRATDGGGRFCQASVVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDADAG 3155
Query: 132 QNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
N + YS+ + D F ++ +G I+ K LD E Q +Y
Sbjct: 3156 LNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVY 3195
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 29/176 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
++ ++ DK E+ ++QV+ATDKD G G V Y +L +TD F++D T
Sbjct: 827 YFVEVSEDK-EVHSEIIQVEATDKDLGPNGHVTYSIL-TDTDT---FSIDSVTGVVRIAR 881
Query: 71 --------EHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
EH I+ +E L ST V + + D+ND P F Y V E
Sbjct: 882 PLDRELQHEHYLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTFIPPNYRVKVREDLP 941
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
+G + + A D D GQ+ V YS+ + + F VD +G +R + LD+EK+Q+Y
Sbjct: 942 EGTVIMWLEAHDPDLGQSGQVRYSLLDHGEGNFDVDKLSGAVRIVQPLDFEKKQVY 997
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKN 99
D+ SG+ L + LD+ T F++ QD+ + ++ V+I+V D ND +
Sbjct: 2754 DRQSGRLKL--EKSLDHETTKWYQFSILARC-----TQDDHEMVASVDVSIQVKDANDNS 2806
Query: 100 PEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI------PFVVDANT 152
P F+S PYE F V G V ++ A+DAD G N V YS+ + F ++ T
Sbjct: 2807 PVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMET 2866
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G I T K LD+EK+ Y +V
Sbjct: 2867 GWITTLKELDHEKRDNYQIKV 2887
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 25/169 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--------TDAASYF---NLD 67
YGA + +G ++QV A +D + Y ++ N + + F NLD
Sbjct: 3235 YGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLD 3294
Query: 68 PATEHQGPIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--- 118
+ H+ + E GG LS ATVN+ VTDIND P F Y + E D +
Sbjct: 3295 YESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISE--DAVLEQ 3352
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
+V V A DAD N+ ++YS+ + F +D G+++ K LD E
Sbjct: 3353 SVITVMADDADGPSNSHIHYSIIDGNQGSSFTIDPVRGEVKVTKLLDRE 3401
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 23/160 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV+ATD DS + Y++ N++ + +F++D +T
Sbjct: 2288 YAATLSEASVIGTSVVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRT 2347
Query: 71 -------EHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
+H ++ +GG LSS V + VTD+ND P F+ YE + E G
Sbjct: 2348 LDYEQSRQHTIFVRAVDGGMPPLSSDMIVTVDVTDLNDNPPFFEQQIYEARISEHAPHGH 2407
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
V V A DAD + YS+ + FV+D+ TG I
Sbjct: 2408 FVTCVKAYDADSSDIDKLQYSILSGNDHKHFVIDSATGII 2447
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 75/172 (43%), Gaps = 21/172 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + E G L +V+ATD D+G + Y L+D+ S L + + P+
Sbjct: 3130 YAITVFENTEPGTLLTRVQATDADAGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDR 3189
Query: 78 -------------DEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAV 120
D+G L++T TV + V DIND P F+ Y +V E G V
Sbjct: 3190 ELQAVYTLSLKAVDQGLPRRLTATGTVVVSVLDINDNPPVFEYREYGATVSEDILVGTEV 3249
Query: 121 GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V+A D NA + YS+ E F +D+ TG + + LDYE Y
Sbjct: 3250 LQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEY 3301
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 57/135 (42%), Gaps = 2/135 (1%)
Query: 37 KATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIN 96
KA + G F + R NT + D T ++ + + V ++V D N
Sbjct: 84 KAEEYILGDFCFLRIRTKGGNTAILNREVKDHYTLIVKALEKNTNVEARTKVRVQVLDTN 143
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGD 154
D P F Y S+PE ++ RV ATDAD G N YYS + F + +G
Sbjct: 144 DLRPLFSPTSYSVSLPENTAIRTSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGV 203
Query: 155 IRTNKALDYEKQQLY 169
I LDY + +LY
Sbjct: 204 IVLTGRLDYLETKLY 218
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVY 137
+G SS A V ++V D ND +P + Y + PE G + +V ATDAD NA +
Sbjct: 3000 DGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTTPEDVLPGKLILQVSATDADIRSNAEIT 3059
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ F ++ +TG+++T+ LD E+Q +Y
Sbjct: 3060 YTLLGSGAEKFKLNPDTGELKTSTPLDREEQAVY 3093
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE 142
++ V ++V N PEF Y+ + E G V + A D DEG+N V YS+
Sbjct: 445 ASTKVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYSIAN 504
Query: 143 --DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSY 183
+PF +D TG + T++ LDYE + RV+ + A+ +
Sbjct: 505 LNHVPFAIDHFTGAVSTSENLDYE----LMPRVYTLRIRASDW 543
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 19/173 (10%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQGPIQD 78
G ++ +G +++ + TD D+G G + Y + N D+ +++ + P+
Sbjct: 723 GIQVKENQPVGSSVIFMNTTDLDTGFNGKLVYAISGGNEDSCFMIDMETGMLKILSPLDR 782
Query: 79 EG-------------GLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VG 121
E G+ A +++ V D ND PEF Y V E ++ + +
Sbjct: 783 ETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSEDKEVHSEII 842
Query: 122 RVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYLERV 173
+V ATD D G N V YS+ D F +D+ TG +R + LD E Q + ++
Sbjct: 843 QVEATDKDLGPNGHVTYSILTDTDTFSIDSVTGVVRIARPLDRELQHEHYLKI 895
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 69/160 (43%), Gaps = 24/160 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE-------------HQGPI--- 76
++Q+ A D+D K L+ + + F LDPAT HQ +
Sbjct: 1475 ILQISAVDQDE-KNKLIYTLQSSRDPLSLKKFRLDPATGSLYTSEKLDHEAVHQHTLTVM 1533
Query: 77 ---QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
QD + A + + V+D ND P F + Y+ V E G V +V A D D+G+
Sbjct: 1534 VRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVTALDKDKGK 1593
Query: 133 NAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
NA V YS+ F++D G I+T K LD Q Y
Sbjct: 1594 NAEVLYSIESGNIGNSFMIDPVLGSIKTAKELDRSNQAEY 1633
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 75/173 (43%), Gaps = 36/173 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLD--------------------- 67
G ++Q++A+D DSG G V Y L + + F ++
Sbjct: 2825 GSRVIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQ 2884
Query: 68 ---PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRV 123
A++H IQ LSSTA V++ VTD+ND P F + Y+ +V E G + +
Sbjct: 2885 IKVVASDHGEKIQ----LSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSEDDPPGGVIAIL 2940
Query: 124 HATDAD-EGQNAVVYYSVPEDIP---FVVD--ANTGDIRTNKALDYEKQQLYL 170
TDAD E N V Y + P F V+ N + K LD EK+ YL
Sbjct: 2941 STTDADSEEINRQVTYFITGGDPLGQFAVENIQNEWKVYVKKPLDREKRDNYL 2993
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 34/178 (19%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-- 70
TS+ ++Y + + + V+++Q++A D DS + Y++ N +F++ P T
Sbjct: 1139 TSEPVYYPEIMENSPK-DVSVVQIEAFDPDSSSNDKLMYKITSGNPQG--FFSIHPKTGL 1195
Query: 71 --------------EH--QGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH + + D G S+ A V +++ D ND P+F Y+ +P
Sbjct: 1196 ITTTSRKLDREQQDEHILEVTVTDNGIPPKSTIARVIVKILDENDNKPQFLQKFYKIRLP 1255
Query: 113 EGQD--------GLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNK 159
E + + RV ATD DEG NA + YS+ E F ++ TG + + +
Sbjct: 1256 EREKPDRERNARREPLYRVIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTGVVSSKR 1313
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 74/176 (42%), Gaps = 34/176 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + +G ++QV A DKD GK V Y + N + F +DP G I+
Sbjct: 1567 YKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSIESGNI--GNSFMIDPVL---GSIKT 1621
Query: 78 -------------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
D+G +S +V I VT ++ +P+F S Y + E
Sbjct: 1622 AKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASPKFTSKEYSVELSETVS 1681
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
G VG V A Q++VVY + F ++ ++G I T KALD+E +Y
Sbjct: 1682 IGSFVGMVTA----HSQSSVVYEIKDGNTGDAFDINPHSGTISTQKALDFETLPIY 1733
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 34/178 (19%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
+L Y A+ + E+G + V A D+DSG+ G V Y L +++ +F + P E
Sbjct: 2083 NLPYYAVVKVDTEVGHVIRYVTAVDRDSGRNGEVHYYLKEHH----EHFQIGPLGEISLK 2138
Query: 76 IQ-----------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
Q D G + +A V + +T +N P F+ Y + E
Sbjct: 2139 KQFELDTLNKEYLVTVVAKDGGNPAFSAEVIVPITVMNKAMPVFEKPFYSAEIAENI--- 2195
Query: 119 AVGRVHA----TDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+VH+ A+ + V+YS+ + P F ++ NTG I LD+E Y
Sbjct: 2196 ---QVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAPLDFEAHPAY 2250
Score = 39.3 bits (90), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G + V+I V DIND P F Y ++ E G +V +V ATD+D N + Y
Sbjct: 2262 GAHAEVFVDIIVEDINDNPPVFAQQSYAATLSEASVIGTSVVQVRATDSDSEPNRGISYQ 2321
Query: 140 V-----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ F VD++TG I + LDYE+ + +
Sbjct: 2322 MFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQH 2356
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 30/171 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDN---------------------NTDAASYFNLD 67
+G +M V A D+D+G+ G + Y + D + ++ S++ L
Sbjct: 1049 VGSLVMTVSAHDEDAGRDGEIRYSIRDGSGVGVFKIGEETGVIETSDRLDRESTSHYWLT 1108
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
QG + LSS + I V D+ND P+ Y + E ++V ++ A
Sbjct: 1109 VFATDQGVVP----LSSFIEIYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAF 1164
Query: 127 DADEGQNAVVYYSVPEDIP---FVVDANTGDI-RTNKALDYEKQQLYLERV 173
D D N + Y + P F + TG I T++ LD E+Q ++ V
Sbjct: 1165 DPDSSSNDKLMYKITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILEV 1215
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVY 137
+G + V I+V D ND P+F + YE +PE + ++ A D DE +N ++Y
Sbjct: 1433 DGTTTILTQVFIKVIDTNDHRPQFSTSKYEVVIPEDTAPETEILQISAVDQDE-KNKLIY 1491
Query: 138 YSVPEDIP-----FVVDANTGDIRTNKALDYE 164
P F +D TG + T++ LD+E
Sbjct: 1492 TLQSSRDPLSLKKFRLDPATGSLYTSEKLDHE 1523
>gi|209969726|ref|NP_001129641.1| protocadherin 1 precursor [Xenopus laevis]
gi|15022451|dbj|BAB62263.1| axial protocadherin [Xenopus laevis]
Length = 1016
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 81/165 (49%), Gaps = 28/165 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ--------------- 77
+M+V ATD DSG + Y +L + + A F+++P + G I+
Sbjct: 488 VMEVSATDADSGSNAQLHYSILPDPS-ARGVFSINPDS---GQIRVNMVLDREQREHYDF 543
Query: 78 -----DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
D+G L TA+V I V D ND +P+F Y FSV E L+ VG V DAD
Sbjct: 544 HVVAVDKGIPSLKGTASVVITVLDRNDNDPKFMLNGYNFSVMENMPRLSPVGMVTVIDAD 603
Query: 130 EGQNAVVYYSV-PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
+G+NA + SV PE FV+ TG I ++ + D E Q Y R+
Sbjct: 604 KGENAHIQLSVEPESGEFVIQNGTGTILSSISFDREHQSTYTFRL 648
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 55/102 (53%), Gaps = 5/102 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
LSST ++ ++VTD+ND P F E PE D V V ATDAD G NA ++YS+
Sbjct: 449 LSSTNSLKVQVTDVNDNAPVFSQSLMEVVFPENNDINDLVMEVSATDADSGSNAQLHYSI 508
Query: 141 PEDIP----FVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
D F ++ ++G IR N LD E+++ Y V + K
Sbjct: 509 LPDPSARGVFSINPDSGQIRVNMVLDREQREHYDFHVVAVDK 550
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 32/158 (20%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--QGP-------------------- 75
ATD+DSG G+ Y L+ +A F L A + + P
Sbjct: 155 ATDRDSGVNGVSSYELI-VGPEAQDLFGLQVAEDQDEKQPQLIVMGKLDREQRDSYDLTI 213
Query: 76 -IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+QD G +S+A + I + D ND P+F+ L YE +PE G +V +V A D+D+G
Sbjct: 214 KVQDGGTPARASSALLRISILDTNDNAPKFEKLAYEAELPENSPMGHSVLQVKANDSDQG 273
Query: 132 QNAVVYYSVPEDIPFV-----VDANTGDIRTNKALDYE 164
NA + YS + V +D +TG I +D E
Sbjct: 274 VNAEIDYSFHQASDTVRRLLHLDRSTGLITVQGPIDRE 311
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 77/194 (39%), Gaps = 41/194 (21%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---E 71
+ L Y A + +G +++QVKA D D G ++Y + +LD +T
Sbjct: 244 EKLAYEAELPENSPMGHSVLQVKANDSDQGVNAEIDYSFHQASDTVRRLLHLDRSTGLIT 303
Query: 72 HQGPI--QDEGGLS--------------STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
QGPI +D G L + V I + D ND P + F + Q
Sbjct: 304 VQGPIDREDVGTLKFSVIAKDIGANPKIARTQVTIYMRDTNDNRPVIEI--RGFGLVTHQ 361
Query: 116 DGLA-----------VGRVHATDADEGQNAVVYYSVPEDIPF----VVDANTGD-----I 155
G+A V V +D DEG NA V V D+PF V D T +
Sbjct: 362 GGVANISEDVPVETPVALVQVSDIDEGVNAAVTCVVAGDVPFQLKQVSDTGTDSKKKYFL 421
Query: 156 RTNKALDYEKQQLY 169
+T +LDYE + Y
Sbjct: 422 QTTTSLDYESVKEY 435
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Query: 83 SSTATVNIRVTDINDKNPEF---QSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYS 139
SS V I V D ND P ++ Y++ PE G V V A D D G NA + YS
Sbjct: 659 SSYVGVTINVLDENDNAPVIVVPSNISYKYLTPETHPGTQVNWVRAEDMDTGVNAELEYS 718
Query: 140 VPEDIP---FVVDANTGDIRTNKAL 161
+ P F + N G++ K +
Sbjct: 719 IASGNPFQLFQISPNNGEVTLEKTI 743
>gi|187954583|gb|AAI40920.1| DCHS2 protein [Homo sapiens]
Length = 1368
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 74/164 (45%), Gaps = 30/164 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN--NTDAASYFNLDPATEHQGPI 76
Y A + +G +QV A+D DSG +G +EY L D + +A F +DP H G I
Sbjct: 668 YNATIAEHAPVGHCFLQVTASDADSGLYGFIEYSLYDGFLSYEAPQAFRIDP---HDGQI 724
Query: 77 ---------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EG 114
+D GGLS+ A V + + D+ND P F Y S+ E
Sbjct: 725 CVSQDIDRERDPATYDLLVEAKDGGGLSAQAFVRVDLEDVNDNRPVFNPSTYVTSISDET 784
Query: 115 QDGLAVGRVHATDADEG-QNAVVYYSVPEDIP--FVVDANTGDI 155
Q G + V ATD D G V Y +P ++ F +D+ TG I
Sbjct: 785 QPGTEIINVLATDQDSGIYGTVAYELIPGNVSSLFTIDSTTGII 828
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 60/130 (46%), Gaps = 28/130 (21%)
Query: 35 QVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP------IQ 77
++ A D DSGK G + Y LL + +F ++P T EH+G +
Sbjct: 1212 KITAIDMDSGKNGQLLYFLLSD----GKFFKMNPNTGELINWVALDREHRGHHEMTVLVT 1267
Query: 78 DEGGLSSTAT--VNIRVTDINDKNPEF-QSLP---YEFSVPEGQD-GLAVGRVHATDADE 130
D G AT V + VTDIND P F Q LP V EGQ + V V A D DE
Sbjct: 1268 DRGSPPRNATMAVYVSVTDINDNRPFFPQCLPGKELHVKVLEGQPVNMLVTTVFAKDPDE 1327
Query: 131 GQNAVVYYSV 140
G NA V YSV
Sbjct: 1328 GNNAEVTYSV 1337
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 69/170 (40%), Gaps = 36/170 (21%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-------- 76
D+ + G ++ V ATD+DSG +G V Y L+ N +S F +D T G I
Sbjct: 782 DETQPGTEIINVLATDQDSGIYGTVAYELIPGNV--SSLFTIDSTT---GIIYLTLPLSH 836
Query: 77 ------------QDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEF----SVPEGQDGL 118
QD GGL++ A V I + EF+ Y F VPE
Sbjct: 837 LESTTLLLMVSAQDGGGLTAVINADVTIHIFQTTLAPAEFERPKYTFLVYEDVPEDS--- 893
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQ 166
+G V A + + Y D+ F + G IRT K LD+E Q
Sbjct: 894 PIGTVKAREPLNSSEPIFYRISSGDLGGKFSIHPRLGTIRTRKPLDHETQ 943
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 45/99 (45%), Gaps = 16/99 (16%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV-PEDI 144
+V +RV D ND P F+ Y +V E Q G V RV ATD D G N V YSV +
Sbjct: 281 SVELRVLDENDNPPVFEQDEYRAAVREDAQPGAEVCRVRATDRDLGPNGFVRYSVRARQV 340
Query: 145 P--------------FVVDANTGDIRTNKALDYEKQQLY 169
P F V+ +G +R + LD E Q +
Sbjct: 341 PGAGSGGGALGDAAYFAVEELSGVVRVWRPLDREAQAWH 379
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 51/109 (46%), Gaps = 23/109 (21%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQN------- 133
LS+ T+ +RV D+ND+ P F Y+ SV E G V V A+DADE +
Sbjct: 519 LSTEETLLLRVADLNDQPPLFSQQHYKASVSEAAAPGTVVMWVSASDADEAGSDHAWLRY 578
Query: 134 AVVYYSVPEDI---------------PFVVDANTGDIRTNKALDYEKQQ 167
VV S P ++ F +D+ +G I T +ALD E Q+
Sbjct: 579 TVVQLSAPCNLGSLESKMVHTAECGPSFAIDSESGVISTIRALDREVQE 627
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPE 142
S+ VNI V D+ND +P F E + + G A+ A D D G+N ++ YS+
Sbjct: 961 SSTEVNITVMDVNDNHPAFLRTSDEIRISQTTPPGTALYLARAEDRDSGRNGLIRYSIAS 1020
Query: 143 DIP--FVVDANTGDIRTNKALDYEKQQ 167
P F +D G + N +L +Q+
Sbjct: 1021 PQPGVFAIDRALGVLFLNGSLGAGEQR 1047
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 76 IQDEGGLSSTAT-VNIRVTDINDKNPEFQS----LPYEFS-VPEGQDGLAVGRVHATDAD 129
I ++G L + +T V +RV D ND +P F L E S VP+G +G++ A D D
Sbjct: 1164 IPEDGFLQNVSTTVIVRVWDENDNSPTFLHDVLFLKVEESPVPQG----VIGKITAIDMD 1219
Query: 130 EGQNA-VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQ 166
G+N ++Y+ + + F ++ NTG++ ALD E +
Sbjct: 1220 SGKNGQLLYFLLSDGKFFKMNPNTGELINWVALDREHR 1257
>gi|32880203|ref|NP_659422.2| cadherin-24 isoform 2 precursor [Homo sapiens]
gi|30171995|gb|AAP20590.1| cadherin-24 [Homo sapiens]
gi|37181510|gb|AAQ88566.1| CDH24 [Homo sapiens]
gi|119586594|gb|EAW66190.1| cadherin-like 24, isoform CRA_b [Homo sapiens]
gi|119586596|gb|EAW66192.1| cadherin-like 24, isoform CRA_b [Homo sapiens]
gi|225000056|gb|AAI72283.1| Cadherin-like 24 [synthetic construct]
gi|225000556|gb|AAI72574.1| Cadherin-like 24 [synthetic construct]
Length = 781
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 84/185 (45%), Gaps = 31/185 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV A D D +G +L+ D +F++DP T
Sbjct: 155 YHATVPEMSNVGTSVIQVTAHDADDPSYG-NSAKLVYTVLDGLPFFSVDPQTGVVRTAIP 213
Query: 71 --------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E IQ + GGLS + TV + ++D+ND P+F Y+FSV E
Sbjct: 214 NMDRETQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAG 273
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQL 168
G VGR+ A D D G NA++ YS+ + I + G + K LD+E Q+
Sbjct: 274 PGTLVGRLRAQDPDLGDNALMAYSILDGEGSEAFSISTDLQGRDGLLTVRKPLDFESQRS 333
Query: 169 YLERV 173
Y RV
Sbjct: 334 YSFRV 338
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 63/127 (49%), Gaps = 22/127 (17%)
Query: 50 EYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF 109
+Y LL D AS L+P +E I+V DIND P F PY
Sbjct: 114 QYVLLAQAVDRASNRPLEPPSE----------------FIIKVQDINDNPPIFPLGPYHA 157
Query: 110 SVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIPFV-VDANTGDIRTN-KALDY 163
+VPE + G +V +V A DAD+ G +A + Y+V + +PF VD TG +RT +D
Sbjct: 158 TVPEMSNVGTSVIQVTAHDADDPSYGNSAKLVYTVLDGLPFFSVDPQTGVVRTAIPNMDR 217
Query: 164 EKQQLYL 170
E Q+ +L
Sbjct: 218 ETQEEFL 224
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 11/108 (10%)
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVH 124
+DPA +GP +D A+V + V D + P F Y +VPE + G VG++
Sbjct: 345 IDPAYLRRGPFKD------VASVRVAVQDAPEP-PAFTQAAYHLTVPENKAPGTLVGQIS 397
Query: 125 ATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
A D D + + Y +P P F + G I T LD E + +
Sbjct: 398 AADLDSPASPIRYSILPHSDPERCFSIQPEEGTIHTAAPLDREARAWH 445
>gi|426346210|ref|XP_004040777.1| PREDICTED: protocadherin Fat 1 [Gorilla gorilla gorilla]
Length = 4495
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 17/132 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI-- 76
L +M+VK TD DSG +G V Y ++++ Y N LD T + I
Sbjct: 2507 LHTLVMEVKTTDGDSGIYGHVTYHIVNDFAKDRFYINERGQIFTLEKLDRETPAEKVISV 2566
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEG 131
+D GG + TVN+ +TD ND P+F++ YE ++ G +V +V A+DADEG
Sbjct: 2567 RLMAKDAGGKVAFCTVNVILTDDNDNAPQFRATKYEVNIGSSAAKGTSVIKVLASDADEG 2626
Query: 132 QNAVVYYSVPED 143
NA + Y++ D
Sbjct: 2627 SNADITYAIEAD 2638
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 87/176 (49%), Gaps = 29/176 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
++ ++ DK E+ ++QV+ATDKD G G V Y +L +TD F++D T
Sbjct: 827 YFVEVSEDK-EVHSEIIQVEATDKDLGPNGHVTYSIL-TDTDT---FSIDSVTGVVKIAR 881
Query: 71 --------EHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
EH I+ +E LSST V + + D+ND P F Y V E
Sbjct: 882 SLDRELQHEHYLKIEARDQAREEPQLSSTVVVKVSLEDVNDNPPTFIPPNYRVKVREDLP 941
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
+G + + A D D GQ+ V YS+ + + F VD +G +R + LD+EK+Q+Y
Sbjct: 942 EGTVIMWLEAHDPDLGQSGQVRYSLLDHGEGNFDVDKLSGAVRIVQQLDFEKKQVY 997
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKN 99
D+ SG+ L + LD+ T F++ QD+ + ++ V+I+V D ND +
Sbjct: 2754 DRQSGRLKL--EKSLDHETTKWYQFSILARC-----TQDDHEMVASVDVSIQVKDANDNS 2806
Query: 100 PEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI------PFVVDANT 152
P F+S PYE F V G V ++ A+DAD G N V YS+ + F ++ T
Sbjct: 2807 PVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMET 2866
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G I T K LD+EK+ Y +V
Sbjct: 2867 GWITTLKELDHEKRDNYQIKV 2887
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 23/160 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV+ATD DS + Y++ +N++ + +F++D +T
Sbjct: 2288 YAATLSEASVIGTSVVQVRATDSDSEPNRGISYQMFENHSKSHDHFHVDSSTGLISLLRT 2347
Query: 71 -------EHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
+H ++ +GG LSS V + VTD+ND P F+ YE + E G
Sbjct: 2348 LDYEQSRQHTIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPHGH 2407
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
V V A DAD + YS+ + FV+D+ TG I
Sbjct: 2408 FVTCVKAYDADSSDIDKLQYSILSGNDHKHFVIDSATGII 2447
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 54/120 (45%), Gaps = 21/120 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ ATD D + Y LL + A F L+P T E Q
Sbjct: 3039 GKLIMQISATDADIRSNAEITYTLLGS---GAEKFKLNPDTGELKTSTPLDREEQAVYHL 3095
Query: 78 -----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D GG A++ + + D+ND PEF + PY +V E + G + RV ATDAD G
Sbjct: 3096 LVRATDGGGRFCQASIVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDADAG 3155
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVY 137
+G SS A V ++V D ND +P + Y ++PE G + ++ ATDAD NA +
Sbjct: 3000 DGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPEDVLPGKLIMQISATDADIRSNAEIT 3059
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ F ++ +TG+++T+ LD E+Q +Y
Sbjct: 3060 YTLLGSGAEKFKLNPDTGELKTSTPLDREEQAVY 3093
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 81/177 (45%), Gaps = 19/177 (10%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQG 74
+L G ++ +G +++ + +TD D+G G + Y + N D+ +++ +
Sbjct: 719 TLLTGIQVKENQPVGSSVIFMNSTDLDTGFNGKLVYAISGGNEDSCFMIDMETGMLKILS 778
Query: 75 PIQDEG-------------GLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
P+ E G+ A +++ V D ND PEF Y V E ++
Sbjct: 779 PLDRETTDKYTLNITVYDLGIPQKAAWRLLHVTVVDANDNPPEFLQESYFVEVSEDKEVH 838
Query: 119 A-VGRVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ + +V ATD D G N V YS+ D F +D+ TG ++ ++LD E Q + ++
Sbjct: 839 SEIIQVEATDKDLGPNGHVTYSILTDTDTFSIDSVTGVVKIARSLDRELQHEHYLKI 895
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 57/135 (42%), Gaps = 2/135 (1%)
Query: 37 KATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIN 96
KA + G F + R NT + D T ++ + + V ++V D N
Sbjct: 84 KAEEYILGDFCFLRIRTKGGNTAILNREVKDHYTLIVKALEKNTNVEARTKVRVQVLDTN 143
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGD 154
D P F Y S+PE ++ RV ATDAD G N YYS + F + +G
Sbjct: 144 DLRPLFSPTSYSVSLPENTAIRTSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGV 203
Query: 155 IRTNKALDYEKQQLY 169
I LDY + +LY
Sbjct: 204 IVLTGRLDYLETKLY 218
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGPIQDEGGLSSTATVN 89
++Q+ A D+D K L+ + + F LDPAT G + E T TV
Sbjct: 1475 ILQISAVDQDE-KNKLIYTLQSSRDPLSLKKFRLDPATGSLYTSGKLDHEAVHQHTLTVM 1533
Query: 90 IR----------------VTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
+R V+D ND P F + Y+ V E G V +V A D D+G+
Sbjct: 1534 VRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVTALDKDKGK 1593
Query: 133 NAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
NA V YS+ F++D G I+T K LD Q Y
Sbjct: 1594 NAEVLYSIESGNIGNSFMIDPVLGSIKTAKELDRSNQAEY 1633
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE 142
++ V ++V N PEF Y+ + E G V + A D DEG+N V YS+
Sbjct: 445 ASTKVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYSIAN 504
Query: 143 --DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSY 183
+PF +D TG + T++ LDYE + RV+ + A+ +
Sbjct: 505 LNHVPFAIDHFTGAVSTSENLDYE----LMPRVYTLRIRASDW 543
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 75/173 (43%), Gaps = 36/173 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLD--------------------- 67
G ++Q++A+D DSG G V Y L + + F ++
Sbjct: 2825 GSRVIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQ 2884
Query: 68 ---PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRV 123
A++H IQ LSSTA V++ VTD+ND P F + Y+ +V E G + +
Sbjct: 2885 IKVVASDHGEKIQ----LSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSEDDPPGGVIAIL 2940
Query: 124 HATDAD-EGQNAVVYYSVPEDIP---FVVD--ANTGDIRTNKALDYEKQQLYL 170
TDAD E N V Y + P F V+ N + K LD EK+ YL
Sbjct: 2941 STTDADSEEINRQVTYFITGGDPLGQFAVENIQNEWKVYVKKPLDREKRDNYL 2993
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 77/181 (42%), Gaps = 37/181 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSG-KFGLVEYRLLDNN-----------TDAASYF-- 64
Y + E G L +V+ATD D+G G LL +A S F
Sbjct: 3130 YAITVFENTEPGTLLTRVQATDADAGISRGCSCLTLLTEILGASWENVVALQNAGSNFDF 3189
Query: 65 ---------NLDPATEHQGPIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEF 109
NLD + H+ + E GG LS A+VNI VTDIND P F Y
Sbjct: 3190 YSGAVFIIENLDYESSHEYYLTVEATDGGTPSLSDVASVNINVTDINDNTPVFSQDTYTT 3249
Query: 110 SVPEGQDGL---AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDY 163
+ E D + +V V A DAD N+ ++YS+ + F +D G+++ + LD
Sbjct: 3250 VISE--DAVLEQSVITVMADDADGPSNSHIHYSIIDGNQGSSFTIDPVRGEVKVTRLLDR 3307
Query: 164 E 164
E
Sbjct: 3308 E 3308
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 34/178 (19%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-- 70
TS+ ++Y + + + V+++Q++A D DS + Y++ N +F++ P T
Sbjct: 1139 TSEPVYYPEIMENSPK-DVSVVQIEAFDPDSSSNDKLMYKITSGNPQG--FFSIHPKTGL 1195
Query: 71 --------------EH--QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH + + D G S+ A V +++ D ND P+F Y+ +P
Sbjct: 1196 ITTTSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLP 1255
Query: 113 EGQD--------GLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNK 159
E + + RV ATD DEG NA + YS+ E F ++ TG + + +
Sbjct: 1256 EREKPDRERNARREPLYRVIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTGVVSSKR 1313
Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 11/101 (10%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR--------VHATDADEG 131
GLS+ TV + + D ND P F Y + E +V + A DAD+
Sbjct: 1743 AGLSTNTTVLVHLQDENDNAPVFMQAEYTGLISESASINSVVLTDRNVPLVIRAADADKD 1802
Query: 132 QNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
NA++ Y + E F +D++TG I T +LDYE+ ++
Sbjct: 1803 SNALLVYHIVEPSVHTYFAIDSSTGAIHTVLSLDYEETSIF 1843
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G + V+I V DIND P F Y ++ E G +V +V ATD+D N + Y
Sbjct: 2262 GAHAEVFVDIIVEDINDNPPVFAQQSYAATLSEASVIGTSVVQVRATDSDSEPNRGISYQ 2321
Query: 140 VPEDIP-----FVVDANTGDIRTNKALDYEKQQLY 169
+ E+ F VD++TG I + LDYE+ + +
Sbjct: 2322 MFENHSKSHDHFHVDSSTGLISLLRTLDYEQSRQH 2356
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 74/176 (42%), Gaps = 34/176 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + +G ++QV A DKD GK V Y + N + F +DP G I+
Sbjct: 1567 YKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSIESGNI--GNSFMIDPVL---GSIKT 1621
Query: 78 -------------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
D+G +S +V I VT ++ +P+F S Y + E
Sbjct: 1622 AKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASPKFTSKEYSVELSETVS 1681
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
G VG V A Q++VVY + F ++ ++G I T KALD+E +Y
Sbjct: 1682 IGSFVGMVTA----HSQSSVVYEIKDGNTGDAFDINPHSGTIITQKALDFETLPIY 1733
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 34/178 (19%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
+L Y A+ + E+G + V A D+DSG+ G V Y L +++ +F + P E
Sbjct: 2083 NLPYYAVVKVDTEVGHVIRYVTAVDRDSGRNGEVHYYLKEHH----EHFQIGPLGEISLK 2138
Query: 76 IQ-----------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
Q D G + +A V + +T +N P F+ Y + E
Sbjct: 2139 KQFELDTLNKEYLVTVVAKDGGNPAFSAEVIVPITVMNKAMPVFEKPFYSAEIAENI--- 2195
Query: 119 AVGRVHA----TDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+VH+ A+ + V+YS+ + P F ++ NTG I LD+E Y
Sbjct: 2196 ---QVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAPLDFEAHPAY 2250
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 30/171 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDN---------------------NTDAASYFNLD 67
+G +M V A D+D+G+ G + Y + D + ++ S++ L
Sbjct: 1049 VGSLVMTVSAHDEDAGRDGEIRYSIRDGSGVGVFKIGEETGVIETSDRLDRESTSHYWLT 1108
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
QG + LSS + I V D+ND P+ Y + E ++V ++ A
Sbjct: 1109 VFATDQGVVP----LSSFIEIYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAF 1164
Query: 127 DADEGQNAVVYYSVPEDIP---FVVDANTGDI-RTNKALDYEKQQLYLERV 173
D D N + Y + P F + TG I T++ LD E+Q ++ V
Sbjct: 1165 DPDSSSNDKLMYKITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILEV 1215
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVY 137
+G + V I+V D ND P+F + YE +PE + ++ A D DE +N ++Y
Sbjct: 1433 DGTTTILTQVFIKVIDTNDHRPQFSTSKYEVIIPEDTAPETEILQISAVDQDE-KNKLIY 1491
Query: 138 YSVPEDIP-----FVVDANTGDIRTNKALDYE 164
P F +D TG + T+ LD+E
Sbjct: 1492 TLQSSRDPLSLKKFRLDPATGSLYTSGKLDHE 1523
>gi|432107356|gb|ELK32760.1| Protocadherin-11 X-linked [Myotis davidii]
Length = 821
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 81/174 (46%), Gaps = 26/174 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
F + + G L ++ ATD D+G+ + Y L D DA S FNLD T
Sbjct: 273 FISTSVPENNSPGSQLTKISATDADTGRNAEITYLLGD---DAPSEFNLDQRTGILTAMK 329
Query: 71 ----EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE--GQD 116
E Q +D G L + TV + V D ND +P F Y F VPE +
Sbjct: 330 KLDREKQEKYYFTVLAKDNGIPPLITNVTVLVTVLDQNDNSPIFTHNEYNFYVPENLSRH 389
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLY 169
G VG + TD D G+N+ V S+ + + F +D+ TG IR N + D EKQ+ Y
Sbjct: 390 G-TVGLITVTDPDYGENSAVTLSILDVNDDFTIDSQTGVIRPNISFDREKQESY 442
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 10/98 (10%)
Query: 78 DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
++GG SSTA + I + DIND +P F E S+PE G +V ++HATDAD G+N
Sbjct: 25 EDGGFPQKSSTAILQISIADINDNHPVFTESEIEVSIPENAPVGTSVTQLHATDADIGEN 84
Query: 134 AVVYYSVPEDIP------FVVDANTGDIRTNKALDYEK 165
A +++ + F ++++TG I + LD E+
Sbjct: 85 AKIHFYFSNLVSNIAKRLFHLNSSTGLITIKEPLDREE 122
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+ ++ + I++ D ND P F SVPE G + ++ ATDAD G+NA + Y +
Sbjct: 249 LNQSSMLLIKIKDENDNAPVFTQSFISTSVPENNSPGSQLTKISATDADTGRNAEITYLL 308
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+D P F +D TG + K LD EKQ+ Y
Sbjct: 309 GDDAPSEFNLDQRTGILTAMKKLDREKQEKY 339
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 62/150 (41%), Gaps = 30/150 (20%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP---------------I 76
T+ + TD D G+ V +LD N D F +D T P +
Sbjct: 391 TVGLITVTDPDYGENSAVTLSILDVNDD----FTIDSQTGVIRPNISFDREKQESYTFYV 446
Query: 77 QDEGG----LSSTATVNIRVTDINDKNPEF----QSLPYEFSVPEGQDGLAVGRVHATDA 128
Q E G SSTA V I V D+ND P F + YE +P G V V A D
Sbjct: 447 QAEDGGRVSRSSTAKVTINVVDVNDNKPVFLVPSSNYSYELVLPSTDPGTVVFTVVAIDN 506
Query: 129 DEGQNAVVYYSVPEDIP---FVVDANTGDI 155
D G NA + YS+ F+++ TG+I
Sbjct: 507 DTGMNAELQYSIVGGNARGLFIINQTTGNI 536
>gi|158260175|dbj|BAF82265.1| unnamed protein product [Homo sapiens]
Length = 781
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 84/185 (45%), Gaps = 31/185 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV A D D +G +L+ D +F++DP T
Sbjct: 155 YHATVPEMSNVGTSVIQVTAHDADDPSYG-NSAKLVYTVLDGLPFFSVDPQTGVVRTAIP 213
Query: 71 --------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E IQ + GGLS + TV + ++D+ND P+F Y+FSV E
Sbjct: 214 NMDRETQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAG 273
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQL 168
G VGR+ A D D G NA++ YS+ + I + G + K LD+E Q+
Sbjct: 274 PGTLVGRLRAQDPDLGDNALMAYSILDGEGSEAFSISTDLQGRDGLLTVRKPLDFESQRS 333
Query: 169 YLERV 173
Y RV
Sbjct: 334 YSFRV 338
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 63/127 (49%), Gaps = 22/127 (17%)
Query: 50 EYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF 109
+Y LL D AS L+P +E I+V DIND P F PY
Sbjct: 114 QYVLLAQAVDRASNRPLEPPSE----------------FIIKVQDINDNPPIFPLGPYHA 157
Query: 110 SVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIPFV-VDANTGDIRTN-KALDY 163
+VPE + G +V +V A DAD+ G +A + Y+V + +PF VD TG +RT +D
Sbjct: 158 TVPEMSNVGTSVIQVTAHDADDPSYGNSAKLVYTVLDGLPFFSVDPQTGVVRTAIPNMDR 217
Query: 164 EKQQLYL 170
E Q+ +L
Sbjct: 218 ETQEEFL 224
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 11/108 (10%)
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVH 124
+DPA +GP +D A+V + V D + P F Y +VPE + G VG++
Sbjct: 345 IDPAYLRRGPFKD------VASVRVAVQDAPEP-PAFTQAAYHLTVPENKAPGTLVGQIS 397
Query: 125 ATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
A D D + + Y +P P + G I T LD E + +
Sbjct: 398 AADLDSPASPIRYSILPHSDPERCISIQPEEGTIHTAAPLDREARAWH 445
>gi|449500756|ref|XP_004174871.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Taeniopygia
guttata]
Length = 4576
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 82/157 (52%), Gaps = 26/157 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI-- 76
L + +VKATD+DSG G + Y ++++ Y N LD T+ + I
Sbjct: 2504 LHTLVTEVKATDEDSGTHGHITYHIVNDFAKDRFYTNERGQIFTAEKLDRETQAEKVIAI 2563
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD---GLAVGRVHATDAD 129
+D GG + TVN+ +TD ND P+F++ YE ++ G D G +V +V A+DAD
Sbjct: 2564 SLMAKDSGGKVAFCTVNVILTDDNDNAPQFRATEYEVNI--GTDVPRGTSVIKVWASDAD 2621
Query: 130 EGQNAVVYYSVPEDIPFV-----VDANTGDIRTNKAL 161
EG NA + YS+ + V +D+ +G I T ++L
Sbjct: 2622 EGTNADITYSIEAESDNVEENLEIDSLSGIITTKESL 2658
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 83/180 (46%), Gaps = 24/180 (13%)
Query: 11 EMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY------- 63
E DS F + E ++Q+ ATDKD G G V+Y LL +TD +
Sbjct: 816 EFLQDSYF--VEVSENKEPNSEIIQIGATDKDLGANGEVKYSLL-TDTDKFTINSVTGVV 872
Query: 64 ---FNLDPATEH--------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
LD +H + +E L ST + + V D+ND P+F Y +
Sbjct: 873 KVVGVLDREEQHIYFLKIEARDQPTEEPQLFSTVILKVAVEDVNDNPPKFIPSNYHVKIR 932
Query: 113 EG-QDGLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
E +G + + A D D GQ++ V YS+ + D F VD +G IR + LDYEK+QLY
Sbjct: 933 EDLPEGTIITWLEAYDPDLGQSSQVRYSLLDSGDGTFDVDKISGAIRIVQRLDYEKKQLY 992
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 8 SALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSG------------KFGLVEYRLLD 55
+A E T+D+ Y + E G L +V+ATD D+G + ++ L
Sbjct: 3118 NAPEFTTDT--YSITVFENTEPGTLLTRVQATDADAGMHSLTDILSCSQTYSIISLVLSX 3175
Query: 56 NNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG- 114
N Y AT+ P + LSST+++ + V DIND P F+ Y SV E
Sbjct: 3176 NQRQQTVYTLTLKATDEGLPRR----LSSTSSLIVSVLDINDNPPVFEQREYSASVSEDI 3231
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G V ++HA D NA + YS+ E F +D+ TG I ++LDYE Y
Sbjct: 3232 LVGTEVLQIHAASRDIEANAEITYSIVSGNEHGKFSIDSTTGAIFIIESLDYESSHEY 3289
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 78/174 (44%), Gaps = 25/174 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN---------TDAASYF--NLD 67
Y A + +G ++Q+ A +D + Y ++ N T A + +LD
Sbjct: 3223 YSASVSEDILVGTEVLQIHAASRDIEANAEITYSIVSGNEHGKFSIDSTTGAIFIIESLD 3282
Query: 68 PATEHQGPIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--- 118
+ H+ + E GG LS TVNI VTDIND +P F Y + E D +
Sbjct: 3283 YESSHEYYLTVEATDGGTPSLSDVVTVNINVTDINDNSPVFSQDTYTAVISE--DAMLEQ 3340
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V V A DAD N V+Y++ + PF +D G+I+ K LD EK Y
Sbjct: 3341 SVITVMADDADGPSNNRVHYTIIDGNQGNPFTIDPTRGEIKVTKLLDREKISGY 3394
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 61 ASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
AS+F L+ T + ++A V I+V +N PEF Y+ S E G +
Sbjct: 426 ASHFELEVVTSDR---------RASAKVLIKVLGMNSNPPEFTQTSYKASFDENVPIGTS 476
Query: 120 VGRVHATDADEGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYE 164
V RV A D DEG+N V YS+ +PFV++ +G I T++ LDYE
Sbjct: 477 VMRVSAKDPDEGENGYVTYSIANLNPLPFVINHFSGIISTSEDLDYE 523
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 19/114 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G ++ QV ATD DSG + Y L+++N+++ YF++D +T
Sbjct: 2285 YIATLSEASVIGTSVAQVSATDADSGTNRGISYHLVEDNSESHDYFHIDSSTGLILTAKT 2344
Query: 71 -------EHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
+H+ I+ +GG LSS V + VTD+ND P F L YE + E
Sbjct: 2345 LDYEQIKQHKLLIRAVDGGMLPLSSDTIVTVDVTDLNDNPPLFSQLLYEAKISE 2398
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE 142
S+ V+I+V D ND P +S PYE F V G V +V TD D G N V YS+
Sbjct: 2788 SSVEVSIQVKDANDNQPILESNPYEAFIVENTPAGTRVIQVKGTDLDSGLNGQVTYSLXS 2847
Query: 143 ----DI--PFVVDANTGDIRTNKALDYEKQQLY 169
DI F ++ TG I T K LD+EK+ Y
Sbjct: 2848 FSELDIIESFTINMETGWITTLKELDHEKRDKY 2880
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G + V+I V DIND P F Y ++ E G +V +V ATDAD G N + Y
Sbjct: 2259 GAHADVFVDIIVEDINDNPPVFTEQSYIATLSEASVIGTSVAQVSATDADSGTNRGISYH 2318
Query: 140 VPEDIP-----FVVDANTGDIRTNKALDYE--KQQLYLER 172
+ ED F +D++TG I T K LDYE KQ L R
Sbjct: 2319 LVEDNSESHDYFHIDSSTGLILTAKTLDYEQIKQHKLLIR 2358
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 74/162 (45%), Gaps = 28/162 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASY--FNLDPAT---------------EHQGP 75
++QV ATD+D K L+ + +TD S F LDPAT +H
Sbjct: 1470 ILQVSATDRDE-KNKLI--YTIQGSTDPISLKKFRLDPATGSLYTSEKLDHETMNQHILT 1526
Query: 76 I----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
I QD + A V + V+D ND P F S YE V E G AV +V A D D+
Sbjct: 1527 IMVRDQDVPVKRNYARVVVNVSDTNDHAPWFTSPAYEGRVYESAAVGSAVLQVTALDKDK 1586
Query: 131 GQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
G+NA + YS+ F++D G I+ K LD Q+ Y
Sbjct: 1587 GKNAEIVYSIESGNIGNSFLIDPILGMIKIAKELDRSNQEEY 1628
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 27/173 (15%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP-- 75
+Y A+ D E G + +V A DKD+GK G V Y L ++N +F +DP E
Sbjct: 2081 YYAAVKVDS-EAGHIIQRVTAVDKDTGKNGEVRYYLKEHN----EHFQIDPTGEISLKKK 2135
Query: 76 ---------------IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
+D G + +A V + +T ++ P F+ Y +PE Q
Sbjct: 2136 FEPDTLNKEYLVTVVAKDGGDPAFSAEVTVPITVMSKAMPVFEKPFYSSEIPENIQLHSP 2195
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
V V A ++ EGQ V+YS+ P F ++ NTG LD+E Y
Sbjct: 2196 VVHVQA-NSPEGQGLKVFYSITGGDPFNQFTINFNTGVXNVVAPLDFESHPAY 2247
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVY 137
+G ++ A V ++V D ND +P + Y SVPE G + +V ATDAD NA +
Sbjct: 2997 DGTFAAKAVVEVKVLDANDNSPVCEKTLYADSVPEDALPGKLIMQVSATDADIRSNAEIT 3056
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ F + +TG+++T ALD E+Q +Y
Sbjct: 3057 YTLHGTGAEKFRLTPDTGELKTLMALDREQQAVY 3090
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 36/168 (21%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------EHQG---- 74
V+++Q++A D DS + Y++ N +F+++P T E QG
Sbjct: 1151 VSVIQIEAFDPDSSSSEKLSYKITSGNPQG--FFSINPKTGLITTTSRKLDREQQGEHIL 1208
Query: 75 --PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG----QDGLA----VGR 122
+ D G S+ A V ++V D ND P+F Y+ +PE ++ A + R
Sbjct: 1209 EVTVTDNGTPAKSTIARVIVKVLDENDNKPQFLQKFYKIRLPERGKPERERTARREPIYR 1268
Query: 123 VHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNK---ALDYE 164
V A D DEG NA + YS+ E F ++ TG + + K A DY+
Sbjct: 1269 VIAADKDEGPNAEISYSIEDGDEHGKFFIEPKTGVVSSKKFSAARDYD 1316
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 11/101 (10%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR--------VHATDADEG 131
GLSS ATV + + D ND P F Y + E +V + A DAD+
Sbjct: 1738 AGLSSNATVLVHLQDENDNPPVFMQAEYTGLISESASINSVVLTDKNIPLVIRAADADKE 1797
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
NA++ Y + E F +D++TG IRT +LDYE+ ++
Sbjct: 1798 SNALLVYQIVEPSVRQYFAIDSSTGAIRTVMSLDYEETNIF 1838
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 76/180 (42%), Gaps = 28/180 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPAT------- 70
Y A + G ++QVK TD DSG G V Y L + D F ++ T
Sbjct: 2811 YEAFIVENTPAGTRVIQVKGTDLDSGLNGQVTYSLXSFSELDIIESFTINMETGWITTLK 2870
Query: 71 --EHQGP--------IQDEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-D 116
+H+ D G LSS A V + VTD+ND P F + Y+ +V E
Sbjct: 2871 ELDHEKRDKYKIIVVASDRGEKIQLSSMAVVEVTVTDVNDNPPRFTAEIYKGTVSEDDPP 2930
Query: 117 GLAVGRVHATDAD-EGQNAVVYYSVPEDIP---FVVD--ANTGDIRTNKALDYEKQQLYL 170
G + + TDAD E N V+Y + P F ++ N + K LD E++ YL
Sbjct: 2931 GGVIAILSTTDADTEETNRQVFYYITGGDPLGQFAIENIQNEWKVYVKKPLDREEKDNYL 2990
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 53/124 (42%), Gaps = 21/124 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG---- 74
G +MQV ATD D + Y L + A F L P T E Q
Sbjct: 3036 GKLIMQVSATDADIRSNAEITYTL---HGTGAEKFRLTPDTGELKTLMALDREQQAVYHL 3092
Query: 75 --PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D GG A + + + D+ND PEF + Y +V E + G + RV ATDAD G
Sbjct: 3093 LVKATDGGGRFCQANIILTLEDVNDNAPEFTTDTYSITVFENTEPGTLLTRVQATDADAG 3152
Query: 132 QNAV 135
+++
Sbjct: 3153 MHSL 3156
Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 30/187 (16%)
Query: 6 IPSALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN 65
+PS++E+ D +G +++ V A D D+G G + Y + N D++ +
Sbjct: 715 LPSSIEIKED-----------QPVGSSIISVNAADLDTGFNGKLVYVISAGNEDSSFIVD 763
Query: 66 LDPA-----TEHQGPIQDEGGL------------SSTATVNIRVTDINDKNPEFQSLPYE 108
++ + ++D+ L S+ ++I++ D ND PEF Y
Sbjct: 764 MEGGVLKILSPLDRELRDKYTLNITVYDLGIPQKSAWTLLDIKILDANDNPPEFLQDSYF 823
Query: 109 FSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQ 166
V E ++ + ++ ATD D G N V YS+ D F +++ TG ++ LD E+Q
Sbjct: 824 VEVSENKEPNSEIIQIGATDKDLGANGEVKYSLLTDTDKFTINSVTGVVKVVGVLDREEQ 883
Query: 167 QLYLERV 173
+Y ++
Sbjct: 884 HIYFLKI 890
Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 73/173 (42%), Gaps = 28/173 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------ATE 71
Y + +G ++QV A DKD GK + Y + N + F +DP A E
Sbjct: 1562 YEGRVYESAAVGSAVLQVTALDKDKGKNAEIVYSIESGNI--GNSFLIDPILGMIKIAKE 1619
Query: 72 HQGPIQDEGGLSSTAT------------VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
Q+E L AT V+I VT ++ +P+F + Y + E + G
Sbjct: 1620 LDRSNQEEYNLMVKATDKGHPPMSEVTSVHIFVTVSDNASPKFTAKEYSTEISESANIGS 1679
Query: 119 AVGRVHATDADEGQNAVVY--YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
VG V A Q++VVY D F ++ N+G I T K LD+E Y
Sbjct: 1680 FVGMVTAY----SQSSVVYEIKDGNTDDAFAINPNSGVIVTQKILDFETLPFY 1728
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 22/145 (15%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTAT-VNIRVTDINDK 98
D D G ++ R LD + S +NL ++ G S +T V I+V D N+
Sbjct: 1398 DVDKGTGTIIVARPLD--AEQKSNYNLT--------VEATDGTRSISTQVYIKVIDTNNH 1447
Query: 99 NPEFQSLPYEFSVPEGQDGLA---VGRVHATDADEGQNAVVYYSVPEDIP-----FVVDA 150
P+F + YE +PE D L + +V ATD DE +N ++Y P F +D
Sbjct: 1448 RPQFSASKYEVVIPE--DTLPETEILQVSATDRDE-KNKLIYTIQGSTDPISLKKFRLDP 1504
Query: 151 NTGDIRTNKALDYEKQQLYLERVFL 175
TG + T++ LD+E ++ + +
Sbjct: 1505 ATGSLYTSEKLDHETMNQHILTIMV 1529
Score = 39.3 bits (90), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 76 IQDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQ 132
+ +E S A + ++VT D+ND P F +LPY +V + + G + RV A D D G+
Sbjct: 2048 VTEENKPSVVAHIVVKVTVEDVNDNVPFFVNLPYYAAVKVDSEAGHIIQRVTAVDKDTGK 2107
Query: 133 NAVVYYSVPE-DIPFVVDANTGDIRTNKALD 162
N V Y + E + F +D TG+I K +
Sbjct: 2108 NGEVRYYLKEHNEHFQIDP-TGEISLKKKFE 2137
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 32/172 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ----------- 77
+G ++M V A D+D+G+ G + Y + D + F +D E +G I+
Sbjct: 1044 VGSSVMTVSAYDEDAGRDGEIRYSIRDGS--GIGVFRID---EEKGIIETADHLDRETTS 1098
Query: 78 ---------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHA 125
D+G LSS + I V D+ND P+ Y V E ++V ++ A
Sbjct: 1099 HYWLTVYATDQGVVPLSSFIEIYIEVGDVNDNAPQTTEPVYYPEVMENSPKDVSVIQIEA 1158
Query: 126 TDADEGQNAVVYYSVPEDIP---FVVDANTGDI-RTNKALDYEKQQLYLERV 173
D D + + Y + P F ++ TG I T++ LD E+Q ++ V
Sbjct: 1159 FDPDSSSSEKLSYKITSGNPQGFFSINPKTGLITTTSRKLDREQQGEHILEV 1210
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFS--VPEGQDGLAVGRVHATDADEGQNAVVYYSVPED 143
A V I V DIND P F YE S VP + G+ V V+ATDAD G + + YS+ E
Sbjct: 1858 ANVTIYVIDINDCPPVFSRELYETSLLVPTYK-GVKVIGVNATDADSGIFSQLIYSIIEG 1916
Query: 144 I---PFVVDANTGDI 155
F ++ TGDI
Sbjct: 1917 NIGEKFSINPKTGDI 1931
Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 73/189 (38%), Gaps = 39/189 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y A+ + L +++ V A D D V Y ++D N + F +DP +G I+
Sbjct: 3328 YTAVISEDAMLEQSVITVMADDADGPSNNRVHYTIIDGN--QGNPFTIDPT---RGEIKV 3382
Query: 78 ----DEGGLS-----------------STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
D +S +T TVNI V+D+ND P F Y + E +
Sbjct: 3383 TKLLDREKISGYTLTVQASDNGSPPKLNTTTVNIDVSDVNDNPPVFSKGNYSVIIQENKP 3442
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
G +V ++ TD D N PF+ + TG+ KA +Q + L
Sbjct: 3443 VGFSVLQLVVTDRDSSHNGP---------PFLFNILTGN--EEKAFQITQQGVLTTSAAL 3491
Query: 176 ISKFATSYL 184
K YL
Sbjct: 3492 NRKVRDHYL 3500
>gi|195496048|ref|XP_002095528.1| GE19644 [Drosophila yakuba]
gi|194181629|gb|EDW95240.1| GE19644 [Drosophila yakuba]
Length = 3884
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 72/167 (43%), Gaps = 28/167 (16%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD--------------------AASYFNLD 67
+L + +V A DKD G ++Y L+ N D S FNL
Sbjct: 2378 QLNTLITKVHAMDKDFGLNRQIKYSLMGENHDYFKISKSTGIIRLDKSLDRETISLFNLT 2437
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHAT 126
E G + L S ATV + + D+ND PEF Y + E G V +V+AT
Sbjct: 2438 VKAEDCGVPK----LHSIATVAVNILDVNDNPPEFSMRQYSCKILENATHGTEVCKVYAT 2493
Query: 127 DADEGQNAVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D G NA ++Y S E F +D+ TGD+ N LDYE + Y
Sbjct: 2494 SIDIGVNADIHYFIMSGNEQGKFKMDSTTGDLVLNATLDYEMSKFYF 2540
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVP 141
S++ + I + D+ND P Q F + E + G V +HATDAD G NA V Y++
Sbjct: 53 STSKMLPITILDVNDNRPVIQKTLATFRLTESARIGTVVHCLHATDADSGINAQVTYALS 112
Query: 142 EDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+ F V+A TG IR NK LD EKQ +Y
Sbjct: 113 VECSDFTVNATTGCIRLNKPLDREKQDIY 141
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 26/160 (16%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------------EH-- 72
V ++ +KA D D + Y ++ N YF +D T EH
Sbjct: 405 VEIITLKAYDPDIDPTKTITYNIISGN--LVGYFEIDSKTGLIKTTERKLDRENQAEHIL 462
Query: 73 QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
+ I D G LSST+ + + V DIND PEF Y+ VP ++ +VHA D+D
Sbjct: 463 EVAISDNGSPVLSSTSRIVVSVLDINDNGPEFDQRVYKVQVPSSAAVNQSIYQVHAIDSD 522
Query: 130 EGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQ 166
G+N + YS+ F +D+ G I K LD + +
Sbjct: 523 SGENGRITYSIKSGKGKNKFRIDSQRGHIHIAKPLDSDNE 562
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 73/166 (43%), Gaps = 28/166 (16%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQDE----- 79
+G + + ATD DSG V Y L + S F ++ T P+ E
Sbjct: 86 RIGTVVHCLHATDADSGINAQVTYAL----SVECSDFTVNATTGCIRLNKPLDREKQDIY 141
Query: 80 --------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATD 127
GG LSS A V + V D+ND P F Y F V E G + + A D
Sbjct: 142 ALHITAKDGGNPVLSSEALVYVLVDDVNDNAPVFGVQEYIFKVREDLPRGTVLAVIEAVD 201
Query: 128 ADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
D G NA + +S+ E+ F +D +TG IRT LDYE +Q++
Sbjct: 202 EDIGPNAEIQFSLKEETQDKELFRIDKHTGAIRTQGYLDYENKQVH 247
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--F 146
I V DIND P F Y SVPE Q + +VHA D D G N + YS+ + F
Sbjct: 2352 ITVNDINDNTPIFSMAQYRVSVPEDAQLNTLITKVHAMDKDFGLNRQIKYSLMGENHDYF 2411
Query: 147 VVDANTGDIRTNKALDYEKQQLY 169
+ +TG IR +K+LD E L+
Sbjct: 2412 KISKSTGIIRLDKSLDRETISLF 2434
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS 139
G+ + +++ + D+ND PE +S Y ++PE G + +++ATD D G NA + Y
Sbjct: 1515 GVYAEVVLSVSILDVNDCYPEIESDMYNITIPENSSFGTQILKINATDKDSGANAKLSYY 1574
Query: 140 VPEDIP-------FVVDANTGDIRTNKALDYEK 165
+ E I F +D G++ LDYE+
Sbjct: 1575 I-ESINGQNNSELFYIDVTDGNLYLKTPLDYEQ 1606
Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVY 137
+G ++ + ++V DIND P+F Y ++ E ++ + ++HATD DE + +
Sbjct: 678 DGTFTTFTNLLVQVIDINDNPPQFAKDVYHVNISENIEEESVIMQLHATDRDEDKKLFYH 737
Query: 138 YSVPED----IPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
+D F +D+ +G++ + LD+EK ++ VF+
Sbjct: 738 LHATQDPSSLALFRIDSISGNVIVTQRLDFEKTAQHILIVFV 779
Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 22/163 (13%)
Query: 33 LMQVKATDKDSGK------------FGLVEYRL--LDNNTDAASYFNLDPATEHQGPI-- 76
+MQ+ ATD+D K L +R+ + N + + +H +
Sbjct: 720 IMQLHATDRDEDKKLFYHLHATQDPSSLALFRIDSISGNVIVTQRLDFEKTAQHILIVFV 779
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
+D+G G + A + + V D ND +PEF + + VPE G + V A D D G N
Sbjct: 780 KDQGAPGKRNYAKIIVNVHDHNDHHPEFTAKIIQSKVPESAAIGSKLAEVRAIDRDSGHN 839
Query: 134 AVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
A + YS+ F +D G I L+ K Q Y+ +V
Sbjct: 840 AEIQYSIITGNVGSVFEIDPTFGVITLAGNLNINKIQEYMLQV 882
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LS+ A VNI + DIND +P+F Y +V E G + + ATD D N +V Y++
Sbjct: 2553 LSNNAYVNISILDINDNSPKFLQNLYRINVNEDIFVGSKILDIKATDEDSDVNGLVTYNI 2612
Query: 141 P--EDI-PFVVDANTGDIRTNKALDYEKQQLY 169
++I F ++ G I ++ LD E Y
Sbjct: 2613 EKGDNIGQFSIEPKNGTISVSRPLDRETISHY 2644
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 18/152 (11%)
Query: 37 KATDKDSGKFGLVEYRL----------LDNNTDAASYFNLDPATEHQGPIQD----EGGL 82
KA DKD +EY++ +D T S N+ T+ + + +G
Sbjct: 1667 KAYDKDISDTDSLEYKIVYGNELQTYSIDKLTGVISLQNMLNFTDKSSTVLNISVSDGVH 1726
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS-V 140
++ A + I + N +P+F YE VPE G + V A+D D G A +YY V
Sbjct: 1727 TTYARLKISLMPENVYSPQFDQSTYEAQVPENLLHGHNIITVKASDGDFGTYASLYYEIV 1786
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLYL 170
E++ F++D +TG I + D EK+ Y+
Sbjct: 1787 SEEMKKIFLIDQSTGVITSKVTFDREKKDEYV 1818
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG-LAVGRVHATDADEGQNAVVYYSVPEDI 144
A V I V D ND P+F + Y SV E + +++ +V ATDAD G N + Y + D
Sbjct: 2039 ADVLIDVRDENDNYPKFDNTFYSASVAENSEKVISLVKVSATDADTGPNGDIRYYLESDT 2098
Query: 145 P-----FVVDANTGDIRTNKALDYEKQQLYLERVF 174
F +D TG I +LD E Q Y +V
Sbjct: 2099 ENIQNIFDIDIYTGWITLLTSLDREVQSEYNFKVI 2133
Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 63/166 (37%), Gaps = 24/166 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
+Y ++ D + G +MQVKA D DS + G V Y L N F LD T Q
Sbjct: 1340 YYATVSIDDPK-GTIIMQVKAVDLDSAENGEVRYELKKGN---GELFKLDRKTGELSIKQ 1395
Query: 78 DEGG------------------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
G SS A + ++V D P F+ Y +V E + +
Sbjct: 1396 HVEGHNRNYELTVAAYDGAITPCSSDAPLQVKVID--RSMPVFEKQFYTVNVKEDVEMYS 1453
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEK 165
V +++Y + F +D NTG I LDYEK
Sbjct: 1454 ALSVSIEAESPLGRSLIYTISSDSQSFEIDYNTGSIFVVNELDYEK 1499
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 50/129 (38%), Gaps = 22/129 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------------ 70
+G ++ +KATD+DS GLV Y + D F+++P
Sbjct: 2588 VGSKILDIKATDEDSDVNGLVTYNI--EKGDNIGQFSIEPKNGTISVSRPLDRETISHYT 2645
Query: 71 -EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
E Q Q ++ +NI + D ND P F S Y + E + G +DA
Sbjct: 2646 LEIQACDQGNPQRCNSVPININILDTNDNAPIFSSANYSVVLQENRRLGYIFLTFKISDA 2705
Query: 129 DEGQNAVVY 137
DE N Y
Sbjct: 2706 DESPNTTPY 2714
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 20/113 (17%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------ 68
D+ FY A + E ++L++V ATD D+G G + Y L + + + F++D
Sbjct: 2056 DNTFYSASVAENSEKVISLVKVSATDADTGPNGDIRYYLESDTENIQNIFDIDIYTGWIT 2115
Query: 69 -ATEHQGPIQDEGGLSSTAT------------VNIRVTDINDKNPEFQSLPYE 108
T +Q E A V I++ D ND P F+ LP E
Sbjct: 2116 LLTSLDREVQSEYNFKVIAADNGHPKHDAKVPVTIKIVDYNDNAPVFK-LPIE 2167
Score = 37.0 bits (84), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 43/104 (41%), Gaps = 20/104 (19%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR--------------VHATDA 128
SS + I + D ND P F Y V E + A+G + DA
Sbjct: 991 SSCQNIIIHILDANDNIPYFVQNEY---VGELSESAAIGSYVLKVYDSSKDHLTLQVKDA 1047
Query: 129 DEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
D G N +V Y + +D+ F VD+ TG I + LDYE Y
Sbjct: 1048 DVGVNGMVEYHIIDDLANKFFKVDSTTGAIELLRQLDYETNAGY 1091
>gi|189527632|ref|XP_697243.3| PREDICTED: protocadherin-20-like [Danio rerio]
Length = 833
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 85/173 (49%), Gaps = 27/173 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y ++ ++ G L++V+ATD DS +FG VEYR+ + S F + T
Sbjct: 441 YETDIKENNKPGEFLLKVQATDADSHQFGKVEYRITN-----GSPFRIQEETGVILVTEP 495
Query: 71 ---EHQGP-----IQDEGGLSST---ATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
E QG + +GG S A V + V D+ND P F + + F V E L+
Sbjct: 496 LDREQQGTYILTVLAQDGGDPSQEAFAIVFVNVLDMNDNPPAFPTPHFYFFVSESLPHLS 555
Query: 120 -VGRVHATDADEGQNA-VVYYSVPED-IPFVVDANTGDIRTNKALDYEKQQLY 169
VG+V +DAD+G N +V + D PFV+D + G +R+ +D EKQ Y
Sbjct: 556 QVGKVTVSDADDGDNGRIVDLRILNDKAPFVIDMSQGMLRSTGEVDREKQDRY 608
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV 140
L + + V D+ND P+F+ YE + E + G + +V ATDAD Q V Y +
Sbjct: 416 LHGREVIKVVVQDLNDNAPKFEQTRYETDIKENNKPGEFLLKVQATDADSHQFGKVEYRI 475
Query: 141 PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
PF + TG I + LD E+Q Y+ V
Sbjct: 476 TNGSPFRIQEETGVILVTEPLDREQQGTYILTVL 509
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 76/178 (42%), Gaps = 38/178 (21%)
Query: 29 LGVT-LMQVKATDKDSGKFGLVEYRL-----------------------LDNNTDAASYF 64
+G T L+ +A DKD+ GL+ Y L LD T +
Sbjct: 131 IGTTFLLDDQAQDKDTANNGLIHYHLEGSNGFFGIRQEDYGLELIVQKELDRETQDNYFL 190
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPE-GQDGLAVGR 122
L P LS+TA +++ VTD++D PEF P + VP G G AV +
Sbjct: 191 VLVAVDRGSMP------LSATANLSVTVTDVDDNCPEFDDDSPIKAIVPGLGIKGTAVAQ 244
Query: 123 VHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLERVF 174
+ ATD D GQNA + +S I F +D +TG I + + + ++ +VF
Sbjct: 245 LKATDKDLGQNAQITFSFSRQISDRAKTLFYMDRHTGLISLAVDVHTDSPEEHMLKVF 302
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSV----PEGQDGLAVGRVHATDADEGQNAVVY 137
LS+T + + V DIND P+ S P Q G + +++A D D G N+ +
Sbjct: 622 LSTTVKMTVFVEDINDNQPQVLLPSSNLSCLTISPATQAGSMITKIYAIDEDSGMNSDIT 681
Query: 138 YSVPE-----DIPFVVDANTGDIRTNKAL---DYEKQQLYL 170
Y + PF +D ++G+I + L DY L++
Sbjct: 682 YQIIASEPALQSPFQIDQHSGNITLVQHLRGEDYGMHHLFI 722
>gi|402870674|ref|XP_003899331.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23-like [Papio anubis]
Length = 2924
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 31/184 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA-------- 69
F A ++ +G + + A D D G+ G V Y +L N + A F LD +
Sbjct: 1176 FPIAHVKEDVTVGSLVHHIIAHDPDEGRNGKVTYSILSGNENMA--FMLDESSGLLTTTC 1233
Query: 70 -------TEHQGPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
T+H + D+G LSS+ T+ I V D+ND+ P F+ YE SV E Q+ G
Sbjct: 1234 PLDYEMKTQHILIVLALDDGTPALSSSQTLTITVLDVNDEAPVFKQHLYEASVKENQNPG 1293
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLE 171
V RV A D D G N+ + + + +P F ++++TG++ T LD E Q+++
Sbjct: 1294 EFVTRVEALDRDSGVNSKLQFEI---MPGASFELFEINSDTGEVVTTTMLDREIQEVFTL 1350
Query: 172 RVFL 175
RV +
Sbjct: 1351 RVLV 1354
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 78/178 (43%), Gaps = 25/178 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA------ 69
+L+Y R+ E+G + + A DKD G G EY L D +A+ F +DP
Sbjct: 1488 TLYYQFSVREDAEVGTVVFVLSAVDKDEGLNGQTEYFLTD---EASGAFTIDPMSGTLRT 1544
Query: 70 ---------TEHQGP-----IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYE-FSVPEG 114
++H +G S+T + + VTD+ND +P + P++ F P+
Sbjct: 1545 SNTLDREARSQHTFSAVARDCSXQGSRSTTVIIKVCVTDVNDNDPVLEQNPFDVFLSPQS 1604
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLE 171
V A D D G N V +S E F +D +TG+I+ + E ++L+
Sbjct: 1605 PTNQTTVIVRADDPDLGPNGTVVFSFAETQSMFSIDKHTGEIQFQQNPSSEYFPIWLQ 1662
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 77/162 (47%), Gaps = 31/162 (19%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ---- 77
++QV ATD DSG GL+EY +L N + A F +D + EH
Sbjct: 1814 VIQVFATDLDSGLNGLIEYSILSGNQEEA--FQIDALSGVITTKGILDYEHTSSYSLIVQ 1871
Query: 78 --DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD---GLAVGRVHATDADE 130
D+G LS+T + ++VTDIND P F LP E +V +D G+ V V D D
Sbjct: 1872 ATDKGMPRLSNTTIIKVQVTDINDNAPAF--LPSE-AVEIAEDSLPGVVVTHVSVHDVDL 1928
Query: 131 GQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+A ++ E P F +D NTG + K LD+E+ Y
Sbjct: 1929 -NSAFIFSFAKESNPGTKFAIDQNTGVVVLVKTLDFEEVTEY 1969
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 57/115 (49%), Gaps = 16/115 (13%)
Query: 71 EHQGPIQ------DEGGLSSTAT--VNIRVTDINDKNPEF-QSLP---YEFSVPEGQD-G 117
EH+G Q D G AT V + VTDIND P F Q LP V EGQ
Sbjct: 808 EHRGHHQMTVLVTDRGSPPRNATMAVYVSVTDINDNRPFFPQCLPGKELHVKVLEGQPVK 867
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ V V A D DEG NA V YSV + F +DAN+G+IRT L Y+ + Y
Sbjct: 868 MLVTTVFAKDPDEGNNAEVIYSVSSEDSSEHFKIDANSGEIRTTTVLSYDYRPSY 922
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 69/156 (44%), Gaps = 30/156 (19%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------------- 82
V A+D D+G VEY ++D NTD YF ++ E G + L
Sbjct: 1403 VLASDMDAGNNRAVEYHIIDGNTD--EYFAIN---EMSGELSTTRALDREQVSNFTLAIL 1457
Query: 83 ---------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQ 132
SS + +RV D ND F +L Y+FSV E + G V + A D DEG
Sbjct: 1458 CSDLGDPPRSSVIHLQVRVLDANDHTASFPTLYYQFSVREDAEVGTVVFVLSAVDKDEGL 1517
Query: 133 NAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQ 166
N Y + ++ F +D +G +RT+ LD E +
Sbjct: 1518 NGQTEYFLTDEASGAFTIDPMSGTLRTSNTLDREAR 1553
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 25/168 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNN--TDAASY----FNLDPATE--HQGPI---- 76
+ T+ + A D D+G +G + Y ++ T SY F +DP T H I
Sbjct: 2337 ISSTICSISALDFDAGPYGELTYSIISPCFLTHGMSYDHDLFLIDPLTGDIHAKQILDYE 2396
Query: 77 -----------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVH 124
+D+G +++ V + + I++ P F Y F++PE +D +GRV
Sbjct: 2397 NGNKYCLTVQAKDKGDATASLVVWVDIEGIDEFEPIFTQDQYFFTLPEKNKDRQLIGRVE 2456
Query: 125 ATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEKQQLYLE 171
A+DAD G + V+ YS+ PF V+ G+I +AL K QL E
Sbjct: 2457 ASDADAGIDGVILYSLGTSSPFFSVNKTNGNIYLIRALPLIKSQLNKE 2504
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 69/158 (43%), Gaps = 42/158 (26%)
Query: 35 QVKATDKDSGKFGLVEYRLLDN--NTDAASYFNLDPATEHQGPI---QD----------- 78
+V A+D DSG +G +EY L D + +A F +DP H G I QD
Sbjct: 76 EVTASDADSGLYGFIEYSLYDGFLSYEAPQAFRIDP---HDGRICVSQDIDRERDPATYD 132
Query: 79 -------------------EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGL 118
+GGLS+ A V + + D+ND +P F Y S+ E Q G
Sbjct: 133 LLVKAKDGDEQRMTHLVLVKGGLSAQAFVRVDLEDVNDNHPVFNPSTYVTSISGETQPGT 192
Query: 119 AVGRVHATDADEG-QNAVVYYSVPEDIP--FVVDANTG 153
+ V ATD D G V Y +P D+ F +D+ TG
Sbjct: 193 EIINVLATDRDSGIYGTVAYELIPGDVSSLFTIDSTTG 230
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSG-----KFGLV---EYRLLDNNTDAASYFN---L 66
Y A ++ G + +V+A D+DSG +F ++ + L + N+D L
Sbjct: 1281 LYEASVKENQNPGEFVTRVEALDRDSGVNSKLQFEIMPGASFELFEINSDTGEVVTTTML 1340
Query: 67 DPATEH----QGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
D + + ++D G LSST T+ V D ND PEF Y+ V E Q+ V
Sbjct: 1341 DREIQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEFIVSSYDIEVLENQEPEVV 1400
Query: 121 GRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEK 165
V A+D D G N V Y + + D F ++ +G++ T +ALD E+
Sbjct: 1401 YTVLASDMDAGNNRAVEYHIIDGNTDEYFAINEMSGELSTTRALDREQ 1448
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 76/172 (44%), Gaps = 21/172 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA---------------S 62
Y + + E G +++ VKA DS + L +Y + N D
Sbjct: 1696 LYKGLVTENCEAGTSIVTVKAFAPDSVQDSL-KYSIFSGNEDGVLSLCSKSGQLTVKEPK 1754
Query: 63 YFNLDPATEHQGPIQDEG-GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-V 120
+ + + E Q I E G + V + + D ND +P F+ Y+ SV EG+ A V
Sbjct: 1755 FLDFEVRNEVQLIILAESSGHRAYCKVAVLIQDENDNSPRFEQSVYQASVSEGEFYNAHV 1814
Query: 121 GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ATD D G N ++ YS+ ++ F +DA +G I T LDYE Y
Sbjct: 1815 IQVFATDLDSGLNGLIEYSILSGNQEEAFQIDALSGVITTKGILDYEHTSSY 1866
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
LSSTA ++I+V D+ND P F SL Y V E G + V A D D G +A + Y +
Sbjct: 2198 LSSTAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGSHITVVSANDRDTGSHAEIIYHI 2257
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEK 165
E F ++ NTG + K LDYE+
Sbjct: 2258 ISGNEKGHFYLEENTGVLYLVKPLDYEE 2285
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---PED 143
T I + D+ND NP F S P + G V + A D DEG+N V YS+ E+
Sbjct: 1158 TAQIVILDVNDHNPTFMSFPIAHVKEDVTVGSLVHHIIAHDPDEGRNGKVTYSILSGNEN 1217
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLYL 170
+ F++D ++G + T LDYE + ++
Sbjct: 1218 MAFMLDESSGLLTTTCPLDYEMKTQHI 1244
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 67/183 (36%), Gaps = 30/183 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQ-G 74
SL Y ++ LG + V A D+D+G + Y ++ N Y + +
Sbjct: 2220 SLSYHTHVKESTPLGSHITVVSANDRDTGSHAEIIYHIISGNEKGHFYLEENTGVLYLVK 2279
Query: 75 PIQDEGGLSSTATVN---------------IRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
P+ E T TV + V D ND P+F + VPE
Sbjct: 2280 PLDYEEMAKFTLTVQASDAEKKHFSFAVVFVNVLDDNDHAPQFMFSSFNCIVPENLPISS 2339
Query: 119 AVGRVHATDADEGQNAVVYYSV------------PEDIPFVVDANTGDIRTNKALDYEKQ 166
+ + A D D G + YS+ D+ F++D TGDI + LDYE
Sbjct: 2340 TICSISALDFDAGPYGELTYSIISPCFLTHGMSYDHDL-FLIDPLTGDIHAKQILDYENG 2398
Query: 167 QLY 169
Y
Sbjct: 2399 NKY 2401
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV-- 140
S+ VNI V D+ND +P F E + + G A+ A D D G+N ++ YS+
Sbjct: 461 SSTEVNITVLDVNDNHPAFLRTSDEIRISQTTPPGTALYLARAEDRDSGRNGLLRYSITS 520
Query: 141 PEDIPFVVDANTGDIRTNKAL 161
P+ F +D G + N++L
Sbjct: 521 PQPGVFAIDRALGVLFLNRSL 541
>gi|345308451|ref|XP_003428695.1| PREDICTED: protocadherin Fat 4-like, partial [Ornithorhynchus
anatinus]
Length = 563
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 73/157 (46%), Gaps = 20/157 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI--------------QD 78
+ + +ATD DSG VEY L A +D GP+ D
Sbjct: 95 VFRAEATDADSGPNSYVEYSLAGEGAPAFRVGTVDGEVRLVGPLDREEAAELAVTVVATD 154
Query: 79 EGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+GG LS++A V + V D+ND +P F YE V EG G + RV A+DADEG N
Sbjct: 155 KGGPALSASAEVRVVVLDVNDNDPVFSRGAYEVEVEEGALAGTDLLRVSASDADEGPNGE 214
Query: 136 VYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y++ D F +D+ TG + LD E++ Y
Sbjct: 215 VRYALVAGAADREFRLDSVTGVLSVGGPLDREEKAEY 251
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 81/165 (49%), Gaps = 27/165 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQG 74
G L++V A+D D G G V Y L+ D F LD T E++
Sbjct: 196 GTDLLRVSASDADEGPNGEVRYALVAGAAD--REFRLDSVTGVLSVGGPLDREEKAEYRL 253
Query: 75 PIQ--DEGGLSSTAT--VNIRVTDINDKNPEFQSLPYEFSVPE-GQDG-LAVGRVHATDA 128
+Q D GG TAT V + + D+ND P F PY VPE G+D V +V A D
Sbjct: 254 TVQASDRGGSPRTATALVAVLLGDVNDFAPVFDPSPYSLDVPENGRDSPRTVLQVVARDD 313
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
D+G N+ + YS+ ED F + +++G++R ++LD E + ++
Sbjct: 314 DQGVNSQLTYSLAGGNEDTAFTL-SSSGELRLVRSLDRETKDRFV 357
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG-LAVGRVHATDADEGQNAVVYYSV 140
L+++A V++ + D+ND P F S P VPE V R ATDAD G N+ V YS+
Sbjct: 57 LTASAQVSVVLLDVNDNPPRFVS-PNLTYVPENTPADTVVFRAEATDADSGPNSYVEYSL 115
Query: 141 P-EDIP-FVVDANTGDIRTNKALDYEK 165
E P F V G++R LD E+
Sbjct: 116 AGEGAPAFRVGTVDGEVRLVGPLDREE 142
>gi|405977655|gb|EKC42094.1| Protein dachsous [Crassostrea gigas]
Length = 2755
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 83/172 (48%), Gaps = 35/172 (20%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-----------------------A 69
+ QV A D D+G + Y ++ N +A F +DP A
Sbjct: 1202 IHQVVAKDLDTGDNARLSYTIISGNVGSA--FTIDPETGQLSCKSLDRETVSSYNLTIRA 1259
Query: 70 TEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
++H P ++ + V ++V D ND P+F +L Y ++ E G V +V A+D
Sbjct: 1260 SDHGSPQRN-----TMCRVFVKVLDKNDNYPQFSALEYAHTIKENVVVGTFVLQVSASDI 1314
Query: 129 DEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
DEG+NA + YS+ D F VD+ +G+I TN DYEK+ Y+ F+++K
Sbjct: 1315 DEGENAHITYSLGNDTDGLFQVDSQSGNITTNGLFDYEKKTSYV--FFVVAK 1364
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE 142
+TA VNI +TD+ND +P+FQ+ + V E +D + HATD D G N V+ YS+
Sbjct: 318 ATAQVNISITDVNDNSPQFQTSSLQIPVWEDEDLSTTLYTAHATDPDSGSNGVILYSMAG 377
Query: 143 DIP--FVVDANTGDIRTNKALDYEKQQLY 169
D F +++ +G+I ++LDYE+ QLY
Sbjct: 378 DSSNTFKLNSTSGEITLLRSLDYEQVQLY 406
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 73/157 (46%), Gaps = 24/157 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNN----------TDAASY-----FNLDPATEHQGPI 76
+ +QV ATD D G ++Y + N T A S + + T+H+ +
Sbjct: 2036 SFLQVHATDDDEGVNAEIQYTITSGNDQGLFIVHGRTGAVSITPNATLDYETTTQHKLIV 2095
Query: 77 Q--DEGGLSST-------ATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATD 127
+ D G +ST AT+ I VTD+N+ P F Y SV EG G V + HA D
Sbjct: 2096 RATDCLGCNSTQIRFSAFATIVINVTDVNEYPPVFPVPFYYASVNEGPTGTKVFQAHAND 2155
Query: 128 ADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYE 164
D G V+ Y + + F +D+ TG + TN ++YE
Sbjct: 2156 KDGGPYGVLSYQIKNTVVFKIDSVTGWVSTNMNINYE 2192
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 77/163 (47%), Gaps = 21/163 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNN-------TDAASYFNLD---PATEHQGPIQ- 77
+G T+++V+A D D+G G ++Y + N ++ NL P E ++
Sbjct: 142 VGTTIVRVQAQDPDTGSAGSIQYSITAGNDRGFFSIITSSGRINLVSPLPLEEKIYKLEV 201
Query: 78 ---DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT-DADE 130
D GL+S A V I +T N P F L Y FSVPE G VG +HAT
Sbjct: 202 TATDGEGLTSIIPAHVYISITGQNSHPPVFDHLTYSFSVPEDTVHGTTVGTIHATVQPVN 261
Query: 131 GQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
G VV YS+ ++ F ++ TG I + K+LD+E Q L
Sbjct: 262 GVTPVVRYSIASGDKNGLFAINDRTGVISSTKSLDHETQAFVL 304
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 83/182 (45%), Gaps = 23/182 (12%)
Query: 10 LEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN------------ 57
L + D Y M R+ G + V+AT SG G + Y L+++N
Sbjct: 1496 LSLRFDQASYHVMIRENPSRGTPVTTVRATFVGSGS-GPITYSLVNSNDQQVFSLGASTG 1554
Query: 58 ---TDAASYFNLDPATE-HQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
+ + + + A E H + GGLS+ + +++TDIND P+F Y S E
Sbjct: 1555 TITINNGATLDFEVAQEVHVMVVATSGGLSTYTRLVVQLTDINDNAPKFAQNVYYSSTWE 1614
Query: 114 GQDG--LAVGRVHATDADEGQNAVVYYSV---PEDIPF-VVDANTGDIRTNKALDYEKQQ 167
G++G + V +V A DAD NA + Y++ E F + ++G + T LDYE Q
Sbjct: 1615 GEEGDQVYVTQVLAVDADSNSNADIMYNIIGGNEGFTFQIYPPHSGIVVTTLPLDYEIQD 1674
Query: 168 LY 169
Y
Sbjct: 1675 SY 1676
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 68/148 (45%), Gaps = 22/148 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-------LDNNTDAAS------YFNL----DPATEH 72
G + Q A DKD G +G++ Y++ +D+ T S Y NL DP
Sbjct: 2145 GTKVFQAHANDKDGGPYGVLSYQIKNTVVFKIDSVTGWVSTNMNINYENLPYLSDPGQNQ 2204
Query: 73 QG---PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDA 128
+ D GL T V + + D+++ P F Y F VP + G A+G+V ATD
Sbjct: 2205 YRFDLTVTDPMGLEDTKPVIVTINDVDEFAPVFTQKKYAFEVPGNAKQGHAIGKVSATDQ 2264
Query: 129 DEGQNAVVYYSVPEDIP-FVVDANTGDI 155
D G +V+Y + + F V+ TG++
Sbjct: 2265 DGGLAGMVFYVIKNPVDYFDVNITTGEV 2292
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVY 137
+G SS+ V I V D ND +P F+ Y F + E G VG+ ATD D G+NA +
Sbjct: 519 KGYRSSSVPVTINVLDANDHSPVFKQSFYTFYILENMAAGTIVGQTTATDKDTGENAYLR 578
Query: 138 YSVPEDIPFV-VDANTGDIRTNKALDYEKQQLY 169
Y + P + +D++TG I T +LD E++ Y
Sbjct: 579 YQFEQPEPHLKIDSDTGVITTTVSLDREEKNFY 611
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 67/159 (42%), Gaps = 23/159 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL-------------DPATEHQGPI 76
G + +V+A D DSG+ G V Y ++ N N+ + A+ H +
Sbjct: 770 GSIVGKVEAKDWDSGENGRVSYSIIGGNVFDVFAVNVSNGNIYCIRNVDYEEASSHSLAV 829
Query: 77 QDEGG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADE 130
+ SST V + V D+ND P F+ P S E G V ATD D
Sbjct: 830 KAVDNSPYNPKSSTINVIVEVVDVNDNPPVFEKDPVLISRKENLPTGYTVHTFTATDKDS 889
Query: 131 GQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEK 165
G N V YS+ P F +D +GD++ LDYE+
Sbjct: 890 GVNGSVRYSIQSQTPDRALFTIDPISGDLKVASVLDYEE 928
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 74/157 (47%), Gaps = 21/157 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRL----------LDNNT-DAASYFNLDPATEHQ----GPIQ 77
++QV+ATD D G G + Y L LD+ T ++ +LD + ++
Sbjct: 1098 VLQVQATDLDIGVNGKLSYYLPPGVGGDKFVLDSTTGQLSTTASLDREAQASYTLTAYVR 1157
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAV 135
D G S+AT+ +RVTD+ND P F S+PE + A+ +V A D D G NA
Sbjct: 1158 DFGYPERYSSATIVVRVTDVNDNLPVFVKDEVSLSIPENTEQRAIHQVVAKDLDTGDNAR 1217
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
+ Y++ F +D TG + K+LD E Y
Sbjct: 1218 LSYTIISGNVGSAFTIDPETGQLSC-KSLDRETVSSY 1253
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYS-- 139
S+ + + V D ND +P F Y+ +PE G+ + V ATDAD G N+V+ Y+
Sbjct: 1791 SAQTILEVNVEDENDNHPVFSQQSYQADIPEFTGSGVKILTVTATDADSGINSVLTYNLI 1850
Query: 140 VPEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V F +D NTG++ TNK ++ + Q + V
Sbjct: 1851 VNPTGGFYIDPNTGELFTNKTVELRQDQQVITLV 1884
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 76/173 (43%), Gaps = 29/173 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA-------------S 62
+L Y ++ +G ++QV A+D D G+ + Y L N+TD
Sbjct: 1289 ALEYAHTIKENVVVGTFVLQVSASDIDEGENAHITYSL-GNDTDGLFQVDSQSGNITTNG 1347
Query: 63 YFNLDPATEHQG-PIQDEGGL----SSTATVNIRVTDINDKNPEFQSLPYE--FSVPEGQ 115
F+ + T + + +GG + T V I ++D+ND P F + Y SV
Sbjct: 1348 LFDYEKKTSYVFFVVAKDGGQKDIKNKTVQVRINLSDVNDNAPVFTEMAYHKNLSVNTAS 1407
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE---DIP----FVVDANTGDIRTNKAL 161
D L V RV A D D G N V YS+ D+ F +DA TGD+ T + L
Sbjct: 1408 DTLVV-RVKADDRDSGINGEVRYSLSNSGTDLATYNMFRIDAVTGDLYTKQTL 1459
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVP 141
++T V++ V D+ND+ P FQ Y +PE + +VHATD DEG NA + Y++
Sbjct: 1999 TNTLVVSVEVRDVNDQRPVFQPTMYFKELPENTAHSNSFLQVHATDDDEGVNAEIQYTIT 2058
Query: 142 ---EDIPFVVDANTG--DIRTNKALDYE 164
+ F+V TG I N LDYE
Sbjct: 2059 SGNDQGLFIVHGRTGAVSITPNATLDYE 2086
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 23/127 (18%)
Query: 35 QVKATDKDS-GKF-GLVEYRLLDNNTDAASYFNLDPAT---------------EHQGPI- 76
+V A D D G+ LV Y L +N+ A+ F +DP + H+ +
Sbjct: 42 EVSANDPDCQGRTQNLVRYHL--DNSTASRPFTVDPTSGQICVSKALDFETKQSHEFTVF 99
Query: 77 -QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV--PEGQDGLAVGRVHATDADEGQN 133
+D G L S A V + ++D+ND +PEF Y +V E G + RV A D D G
Sbjct: 100 ARDAGDLESNAVVKVTLSDVNDNHPEFYPQNYSVNVDLSEANVGTTIVRVQAQDPDTGSA 159
Query: 134 AVVYYSV 140
+ YS+
Sbjct: 160 GSIQYSI 166
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 78/170 (45%), Gaps = 26/170 (15%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL-DNNTDAASYFNLDPAT--------- 70
A + G +++ + A D D+ + G + Y L+ + + + YF + P T
Sbjct: 653 ATVNENEPKGTSVLNISAKDDDALENGTISYSLIAEGDVNVLKYFAIHPKTGLVTTLEVL 712
Query: 71 --EHQ-----GPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
E + G I + G SS++++ + V D ND P F S V E + G
Sbjct: 713 DFEQKNRYALGVIAKDHGNPARSSSSSLVVHVKDENDGRPIFSSQNLTIQVVENIKTGSI 772
Query: 120 VGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEK 165
VG+V A D D G+N V YS+ D+ F V+ + G+I + +DYE+
Sbjct: 773 VGKVEAKDWDSGENGRVSYSIIGGNVFDV-FAVNVSNGNIYCIRNVDYEE 821
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 68/167 (40%), Gaps = 34/167 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH----------------- 72
G T+ ATDKDSG G V Y + D A F +DP +
Sbjct: 876 GYTVHTFTATDKDSGVNGSVRYSIQSQTPDRA-LFTIDPISGDLKVASVLDYEEVKQVSL 934
Query: 73 --QGPIQDEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPE----GQDGLAVGRVH 124
Q Q G AT+ + V D+ND P F+ +SV E G G V +
Sbjct: 935 VIQAKDQCHAGCQQKATITAWLSVLDVNDNTPVFKG-NSSYSVFENETVGPQGFPVTHII 993
Query: 125 ATDA----DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
ATDA DE N V+ +S+ E+ F +D ++G + LD E
Sbjct: 994 ATDADSNVDESGNGVLAFSIVDGNEEGHFAIDRSSGLLSIQTTLDRE 1040
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 33/180 (18%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL--------LDNNT----------- 58
FY + G + Q ATDKD+G+ + Y+ +D++T
Sbjct: 546 FYTFYILENMAAGTIVGQTTATDKDTGENAYLRYQFEQPEPHLKIDSDTGVITTTVSLDR 605
Query: 59 DAASYFNLD-PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQ- 115
+ +++NL A++H P + + V I V D+ND +P+F S P E +V E +
Sbjct: 606 EEKNFYNLTVVASDHGDPKKFD-----YTNVKIFVGDLNDNSPKFLNSQPIEATVNENEP 660
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV--PEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
G +V + A D D +N + YS+ D+ F + TG + T + LD+E++ Y
Sbjct: 661 KGTSVLNISAKDDDALENGTISYSLIAEGDVNVLKYFAIHPKTGLVTTLEVLDFEQKNRY 720
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 71/159 (44%), Gaps = 29/159 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------EHQGPI- 76
GV ++ V ATD DSG ++ Y L+ N T F +DP T + Q I
Sbjct: 1826 GVKILTVTATDADSGINSVLTYNLIVNPTGG---FYIDPNTGELFTNKTVELRQDQQVIT 1882
Query: 77 -----QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDA 128
QD G LS+ +N++V +N PEF +F E + G + V ATD
Sbjct: 1883 LVVTAQDGGRPRLSAVVAINLQVIPVNHYAPEFPPQQSKFIFAEDIKKGENLWSVTATDR 1942
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYE 164
D Q +YYS+ + F +D +G + N+ LD E
Sbjct: 1943 DMKQE--IYYSIKAGNQHNTFGIDRQSGLVFLNENLDRE 1979
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
LSST T+NI V DIND+ P+F P ++ E D G V + A D D ++Y
Sbjct: 1690 LSSTCTLNIAVVDINDQRPKFPD-PMPVNLSEAADVGSLVRLITANDRDRNP-TLLYDFT 1747
Query: 141 PEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
P P F +D +G I K LD+E ++ Y
Sbjct: 1748 PNGNPGNTFTIDRFSGRITLAKPLDHEVRKHY 1779
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 35/168 (20%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI----------- 76
+L TL ATD DSG G++ Y + D+++ F L+ + G I
Sbjct: 350 DLSTTLYTAHATDPDSGSNGVILYSMAG---DSSNTFKLNSTS---GEITLLRSLDYEQV 403
Query: 77 ---------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVH 124
+D+G +ST ++ I V ++ND +P F + Y F+V E + + +V
Sbjct: 404 QLYKLYIEARDQGNPPRTSTLSLTISVLNVNDNSPVFSASSYVFNVSESALVQSNIDQVQ 463
Query: 125 ATDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLY 169
ATD D V YS + + F + +++G I + L+ E++ Y
Sbjct: 464 ATDRDGDH---VSYSFRDSMYLNLFGIGSSSGFIYIKQELNREEKDKY 508
>gi|345798946|ref|XP_003434509.1| PREDICTED: cadherin-12 isoform 1 [Canis lupus familiaris]
Length = 754
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 56/102 (54%), Gaps = 8/102 (7%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY 138
GGL+ T VNI +TD+ND P F + VPE G A+GR+ A D D GQNA + Y
Sbjct: 207 GGLAGTTVVNITLTDVNDNPPRFPKSIFHLKVPESSPIGSAIGRIRAVDPDFGQNAEIEY 266
Query: 139 S-VPED----IPFVVDANT--GDIRTNKALDYEKQQLYLERV 173
+ VP D V D +T G I+ K LD+E ++ Y +V
Sbjct: 267 NIVPGDGGNLFDIVTDEDTQEGVIKLKKPLDFETKKAYTFKV 308
Score = 43.5 bits (101), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 66/173 (38%), Gaps = 33/173 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL---------------------------LDNNTDAA 61
+G + +++A D D G+ +EY + LD T A
Sbjct: 244 IGSAIGRIRAVDPDFGQNAEIEYNIVPGDGGNLFDIVTDEDTQEGVIKLKKPLDFETKKA 303
Query: 62 SYFNLDPATEH-QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
F ++ + H G TATV I V D+ ++ P F Y V E G
Sbjct: 304 YTFKVEASNLHLDHRFHSAGPFKDTATVKISVLDV-EEPPVFSKPLYTMEVYEDTPVGTI 362
Query: 120 VGRVHATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+G V A D D G +AV Y + D F +D G I TN+ LD E Y
Sbjct: 363 IGAVTAQDLDVGSSAVRYFIDWKSDGDSYFTIDGTEGTIATNELLDRESTAQY 415
>gi|338729307|ref|XP_001500396.3| PREDICTED: protocadherin-11 X-linked-like isoform 1 [Equus
caballus]
Length = 1296
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 78/162 (48%), Gaps = 26/162 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G L ++ ATD DSG+ + Y L DA S FNLD T E Q
Sbjct: 482 GTQLTKISATDADSGRNAEISYLL---GIDAPSEFNLDRRTGILTAVKKLDREKQEKYSF 538
Query: 76 ---IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--QDGLAVGRVHATDA 128
+D G L++ ATV + V D ND +P F Y F VPE + G VG + TD
Sbjct: 539 TVLAKDNGIPPLTTNATVLVTVLDQNDNSPIFTHNEYNFYVPENLPRHG-TVGLITVTDP 597
Query: 129 DEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLY 169
D G+N+ V S+ + + F +D TG I+ N + D EKQ+ Y
Sbjct: 598 DYGENSAVTLSILDVNDDFTIDPQTGVIQPNISFDREKQESY 639
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+ ++ + ++V D ND P F SVPE G + ++ ATDAD G+NA + Y +
Sbjct: 446 LNQSSMLLVKVKDENDNAPVFTQPFISLSVPENNSPGTQLTKISATDADSGRNAEISYLL 505
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
D P F +D TG + K LD EKQ+ Y
Sbjct: 506 GIDAPSEFNLDRRTGILTAVKKLDREKQEKY 536
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 65/153 (42%), Gaps = 36/153 (23%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ-------------- 77
T+ + TD D G+ V +LD N D F +DP T G IQ
Sbjct: 588 TVGLITVTDPDYGENSAVTLSILDVNDD----FTIDPQT---GVIQPNISFDREKQESYT 640
Query: 78 -----DEGGL---SSTATVNIRVTDINDKNPEF----QSLPYEFSVPEGQDGLAVGRVHA 125
++GG SSTA V I V D+ND P F + YE +P G V V A
Sbjct: 641 FYVKAEDGGRVSRSSTAKVTINVVDVNDNKPVFVVPSSNYSYELVLPSTNPGTVVFTVVA 700
Query: 126 TDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
D D G NA + YS+ F++D TG+I
Sbjct: 701 VDNDTGMNAELRYSIVGGNTKGLFIIDQTTGNI 733
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 10/98 (10%)
Query: 78 DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
++GG SSTA + + V D ND P F+ E S+PE G +V ++HATDAD G+N
Sbjct: 222 EDGGFPQRSSTAILQVSVADTNDNRPVFKENEIEVSIPENAPVGTSVTQLHATDADIGEN 281
Query: 134 AVV--YYS-VPEDIP---FVVDANTGDIRTNKALDYEK 165
A + Y+S + +I F ++ TG I + LD E+
Sbjct: 282 AKIQFYFSNLVSNIAKRLFHLNTTTGLITIKEPLDREE 319
>gi|119625351|gb|EAX04946.1| dachsous 2 (Drosophila), isoform CRA_d [Homo sapiens]
Length = 1366
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 74/164 (45%), Gaps = 30/164 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN--NTDAASYFNLDPATEHQGPI 76
Y A + +G +QV A+D DSG +G +EY L D + +A F +DP H G I
Sbjct: 668 YNATIAEHAPVGHCFLQVTASDADSGLYGFIEYSLYDGFLSYEAPQAFRIDP---HDGQI 724
Query: 77 ---------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EG 114
+D GGLS+ A V + + D+ND P F Y S+ E
Sbjct: 725 CVSQDIDRERDPATYDLLVEAKDGGGLSAQAFVRVDLEDVNDNRPVFNPSTYVTSISDET 784
Query: 115 QDGLAVGRVHATDADEG-QNAVVYYSVPEDIP--FVVDANTGDI 155
Q G + V ATD D G V Y +P ++ F +D+ TG I
Sbjct: 785 QPGTEIINVLATDQDSGIYGTVAYELIPGNVSSLFTIDSTTGII 828
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 60/130 (46%), Gaps = 28/130 (21%)
Query: 35 QVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP------IQ 77
++ A D DSGK G + Y LL + +F ++P T EH+G +
Sbjct: 1212 KITAIDMDSGKNGQLLYFLLSD----GKFFKMNPNTGELINWVALDREHRGHHEMTVLVT 1267
Query: 78 DEGGLSSTAT--VNIRVTDINDKNPEF-QSLP---YEFSVPEGQD-GLAVGRVHATDADE 130
D G AT V + VTDIND P F Q LP V EGQ + V V A D DE
Sbjct: 1268 DRGSPPRNATMAVYVSVTDINDNRPFFPQCLPGKELHVKVLEGQPVNMLVTTVFAKDPDE 1327
Query: 131 GQNAVVYYSV 140
G NA V YSV
Sbjct: 1328 GNNAEVTYSV 1337
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 69/170 (40%), Gaps = 36/170 (21%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-------- 76
D+ + G ++ V ATD+DSG +G V Y L+ N +S F +D T G I
Sbjct: 782 DETQPGTEIINVLATDQDSGIYGTVAYELIPGNV--SSLFTIDSTT---GIIYLTLPLSH 836
Query: 77 ------------QDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEF----SVPEGQDGL 118
QD GGL++ A V I + EF+ Y F VPE
Sbjct: 837 LESTTLLLMVSAQDGGGLTAVINADVTIHIFQTTLAPAEFERPKYTFLVYEDVPEDS--- 893
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQ 166
+G V A + + Y D+ F + G IRT K LD+E Q
Sbjct: 894 PIGTVKAREPLNSSEPIFYRISSGDLGGKFSIHPRLGTIRTRKPLDHETQ 943
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 45/99 (45%), Gaps = 16/99 (16%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV-PEDI 144
+V +RV D ND P F+ Y +V E Q G V RV ATD D G N V YSV +
Sbjct: 281 SVELRVLDENDNPPVFEQDEYRAAVREDAQPGAEVCRVRATDRDLGPNGFVRYSVRARQV 340
Query: 145 P--------------FVVDANTGDIRTNKALDYEKQQLY 169
P F V+ +G +R + LD E Q +
Sbjct: 341 PGAGSGGGALGDAAYFAVEELSGVVRVWRPLDREAQAWH 379
Score = 42.4 bits (98), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 23/109 (21%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQN------- 133
LS+ T+ +RV D+ND+ P F Y+ SV E G V V A+DADE +
Sbjct: 519 LSTEETLLLRVADLNDQPPLFSQQHYKASVSEAAAPGTVVMWVSASDADEAGSDHAWLRY 578
Query: 134 AVVYYSVPEDI---------------PFVVDANTGDIRTNKALDYEKQQ 167
VV S P ++ F +D+ +G I T + LD E Q+
Sbjct: 579 TVVQLSAPCNLGSLQSKMVHTAECGPSFAIDSESGAISTIRTLDREVQE 627
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPE 142
S+ VNI V D+ND +P F E + + G A+ A D D G+N ++ YS+
Sbjct: 961 SSTEVNITVMDVNDNHPAFLRTSDEIRISQTTPPGTALYLARAEDRDSGRNGLIRYSIAS 1020
Query: 143 DIP--FVVDANTGDIRTNKALDYEKQQ 167
P F +D G + N +L +Q+
Sbjct: 1021 PQPGVFAIDRALGVLFLNGSLGAGEQR 1047
Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 76 IQDEGGLSSTAT-VNIRVTDINDKNPEFQS----LPYEFS-VPEGQDGLAVGRVHATDAD 129
I ++G L + +T V +RV D ND +P F L E S VP+G +G++ A D D
Sbjct: 1164 IPEDGFLQNVSTTVIVRVWDENDNSPTFLHDVLFLKVEESPVPQG----VIGKITAIDMD 1219
Query: 130 EGQNA-VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQ 166
G+N ++Y+ + + F ++ NTG++ ALD E +
Sbjct: 1220 SGKNGQLLYFLLSDGKFFKMNPNTGELINWVALDREHR 1257
>gi|281339742|gb|EFB15326.1| hypothetical protein PANDA_009494 [Ailuropoda melanoleuca]
Length = 4593
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 74/160 (46%), Gaps = 23/160 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG---- 74
G ++QV ATD D + Y LL A F L+P T E QG
Sbjct: 3044 GQLILQVSATDADIRSNAEITYTLLG---PGAEKFTLNPDTGELRTLAPLDREEQGVYNL 3100
Query: 75 --PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D GG S A + + + D+ND PEF + PY +V E + G + RV ATD D G
Sbjct: 3101 LVKATDGGGRSCQANLVLTLEDVNDNAPEFSADPYTITVFENTEPGTLLTRVQATDRDSG 3160
Query: 132 QNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
N + YS+ + F ++ +G I+ K LD E+Q +Y
Sbjct: 3161 LNRKISYSLVNSVDGQFSINELSGIIQLEKPLDREQQAVY 3200
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI-- 76
L +++VKA D DSG +G + Y ++++ Y N LD T + I
Sbjct: 2512 LHTLVIEVKAADGDSGIYGHITYHIVNDFAKDRFYTNERGQIFTLEKLDRETPVEKVISV 2571
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEG 131
+D GG + T+N+ +TD ND P+F++ YE + G +V +V A+DADEG
Sbjct: 2572 RLMAKDAGGKVAFCTINVILTDDNDNAPQFRATRYEVDIGSNAPKGTSVIKVLASDADEG 2631
Query: 132 QNAVVYYSVPED 143
NA V Y++ D
Sbjct: 2632 SNADVTYAIEAD 2643
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 87/176 (49%), Gaps = 29/176 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
++ ++ DK E+ ++QV+ATDKD G G V Y +L +TD F++D T
Sbjct: 826 YFVEVSEDK-EINSEIIQVEATDKDLGPNGHVTYSVL-TDTDK---FSIDGVTGVVKVMR 880
Query: 71 --------------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
E + ++E L ST + + + D+ND P+F Y V E
Sbjct: 881 PLDREAQHVHYLKIEARDQAREEPQLLSTVLLKVSLEDVNDNPPKFVPPNYRVKVREDLP 940
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
+G + + A D D GQ++ V YS+ + + F VD +G +R + LD+EK+Q+Y
Sbjct: 941 EGTIIMWLEAYDPDLGQSSQVRYSLLDHGEGHFDVDKLSGAVRIVQHLDFEKKQVY 996
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 76/171 (44%), Gaps = 29/171 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
YGA + +G ++QV A +D + Y ++ N F++D T I++
Sbjct: 3240 YGATVSEDVLIGTEVLQVYAVSRDIEANAEITYSIMSGNEHGK--FSIDSRTGAIFVIEN 3297
Query: 79 ----------------EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL- 118
+GG LS ATV+I VTDIND +P F Y V E D L
Sbjct: 3298 LDYESSREYYLTIEAMDGGTPSLSDVATVSINVTDINDNSPVFSQDTYTAVVSE--DALL 3355
Query: 119 --AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
+V V A DAD N+ + YS+ + PF VD G+++ K LD E
Sbjct: 3356 EQSVITVMADDADGPSNSHIRYSIIDGNQGSPFTVDPTRGEVKVTKLLDRE 3406
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 19/173 (10%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQGPIQD 78
G ++ H +G +++ + ATD D+G G + Y + N D+ +++ + P+
Sbjct: 722 GIEVKENHPVGSSIIFMNATDLDTGFNGKLVYAISGGNEDSCFIIDMETGMLKILSPLDR 781
Query: 79 EG-------------GLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
E G+ A +++RV D ND PEF Y V E ++ +
Sbjct: 782 ETTDKYTLNVTVSDLGIPQKAAWRLLDVRVLDANDNPPEFLQESYFVEVSEDKEINSEII 841
Query: 122 RVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYLERV 173
+V ATD D G N V YSV D F +D TG ++ + LD E Q ++ ++
Sbjct: 842 QVEATDKDLGPNGHVTYSVLTDTDKFSIDGVTGVVKVMRPLDREAQHVHYLKI 894
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVY 137
+G SS A V ++V D ND +P + Y +VPE G + +V ATDAD NA +
Sbjct: 3005 DGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTVPEDASPGQLILQVSATDADIRSNAEIT 3064
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ P F ++ +TG++RT LD E+Q +Y
Sbjct: 3065 YTLLGPGAEKFTLNPDTGELRTLAPLDREEQGVY 3098
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 75/163 (46%), Gaps = 21/163 (12%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ---------- 77
E G L +V+ATD+DSG + Y L+++ S L + + P+
Sbjct: 3144 EPGTLLTRVQATDRDSGLNRKISYSLVNSVDGQFSINELSGIIQLEKPLDREQQAVYSLT 3203
Query: 78 ----DEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
D+G L++T TV + V DIND P F+ Y +V E G V +V+A D
Sbjct: 3204 LKAVDQGLPRRLTATGTVVVSVLDINDNPPVFEYRDYGATVSEDVLIGTEVLQVYAVSRD 3263
Query: 130 EGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
NA + YS+ E F +D+ TG I + LDYE + Y
Sbjct: 3264 IEANAEITYSIMSGNEHGKFSIDSRTGAIFVIENLDYESSREY 3306
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 14/137 (10%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKN 99
D+ SG+ L + LD+ F++ H D+ + ++ V+I+V D ND +
Sbjct: 2759 DRQSGRLKL--EKSLDHEITKWYQFSILARCTH-----DDYEVVASVDVSIQVKDANDNS 2811
Query: 100 PEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI------PFVVDANT 152
P +S PYE F V G V +V A+D D G N V YS+ + F ++ T
Sbjct: 2812 PVLESNPYEAFIVENLPAGSRVIQVRASDLDSGTNGQVTYSLDQSQSMEVIESFAINVET 2871
Query: 153 GDIRTNKALDYEKQQLY 169
G I T K LD+EK+ Y
Sbjct: 2872 GWITTLKELDHEKRDSY 2888
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 72/168 (42%), Gaps = 34/168 (20%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASY--FNLDPATE-------------HQGPI- 76
++Q+ A DKD K L+ L + D S F LDPAT HQ +
Sbjct: 1474 ILQISAVDKDE-KNKLI--YTLQGSVDPLSVRKFRLDPATGSLFTSETLDHEAVHQHILT 1530
Query: 77 -----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
QD + A + + V+D ND P F S YE V E G V +V A D D+
Sbjct: 1531 VMVRDQDVPVKRNFARIIVNVSDTNDHAPWFTSSSYEGRVYESAAVGSVVLQVTALDKDK 1590
Query: 131 GQNAVVYYSVPEDI---------PFVVDANTGDIRTNKALDYEKQQLY 169
G+NA V YS+ I F +D G I+T K LD E Q Y
Sbjct: 1591 GKNAEVLYSIESGIFGALRNIGNSFTIDPILGSIKTAKELDRESQVEY 1638
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 2/144 (1%)
Query: 37 KATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIN 96
KA + G F + R NT + D T ++ + A V ++V D N
Sbjct: 83 KAEEYILGDFCFLRIRTKGGNTAILNREVKDHYTLIVKAVEKNTNAEARAKVRVQVLDTN 142
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGD 154
D P F Y S+PE +V RV ATDAD G N YYS + F + +G
Sbjct: 143 DLRPLFSPTSYSVSLPENTAMRTSVARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGA 202
Query: 155 IRTNKALDYEKQQLYLERVFLISK 178
+ LDY + +LY + + +
Sbjct: 203 VVLTGRLDYAETKLYELEILAVDR 226
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 16/126 (12%)
Query: 61 ASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
AS+F L+ T + ++ V ++V N PEF Y+ S E G
Sbjct: 430 ASHFELEVTTSDR---------RASTRVLVKVLSANSNPPEFTQSAYKASFDENVPIGTT 480
Query: 120 VGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
V V A D DEG+N V YS+ +PFV++ TG + T++ LDYE + RV+ +
Sbjct: 481 VMSVSAVDPDEGENGYVTYSIANLNHVPFVINHFTGAVSTSEDLDYE----LMPRVYTLR 536
Query: 178 KFATSY 183
A+ +
Sbjct: 537 IRASDW 542
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 23/160 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + +G +++QV+ATD DS + Y + N++ + +F++D +T
Sbjct: 2293 YATTLSEASVIGTSVVQVRATDSDSEPNRGISYHMFGNHSKSHDHFHIDSSTGLISLVRT 2352
Query: 71 -------EHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
+H+ ++ +GG LSS V + VTD+ND P F YE + E G
Sbjct: 2353 LDYEQFQQHKIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFDQHIYEARISEHAIHGH 2412
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
V V A DAD + YS+ + FV+D TG I
Sbjct: 2413 FVTCVKAYDADSSDVDKLDYSILSGNDHKNFVIDRVTGII 2452
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 76/182 (41%), Gaps = 29/182 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y R+ G +M ++A D D G+ V Y LLD+ +F++D + +Q
Sbjct: 931 YRVKVREDLPEGTIIMWLEAYDPDLGQSSQVRYSLLDH---GEGHFDVDKLSGAVRIVQH 987
Query: 78 ----------------DEG---GLSSTATVNIRVTDINDK--NPEFQSLPYEFSVPEGQD 116
D+G LSST V + V D+N+ P F S + V E
Sbjct: 988 LDFEKKQVYNLTVRAKDKGKPVSLSSTCYVEVEVIDVNENLHPPVFSSFVEKGVVKEDVP 1047
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLER 172
G ++ V A D D G++ V YS+ + F +D TG + T + LD E Y
Sbjct: 1048 VGFSIMTVSAHDEDTGRDGEVRYSIRDGSGVGVFRIDEETGVVETAERLDRESTPHYWLT 1107
Query: 173 VF 174
V+
Sbjct: 1108 VY 1109
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 11/101 (10%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR--------VHATDADEG 131
GLSS TV + + D ND P F Y + E +V + ATDAD
Sbjct: 1748 AGLSSNTTVVVHLQDENDNLPVFTQAEYTGLISESASINSVVLTDKNVPLVIRATDADRE 1807
Query: 132 QNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
NA++ Y + E F +D++TG I T +LDYE+ + +
Sbjct: 1808 SNALLVYHIVEPSLHKYFAIDSSTGAIHTVLSLDYEETRTF 1848
Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 73/174 (41%), Gaps = 26/174 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
+L Y A+ + +G + V A D+DSG+ G V Y L +++ +F + A E
Sbjct: 2088 NLPYYAVVKVDTVVGHVIRYVTAVDRDSGRNGEVHYYLKEHH----EHFQIGSAGEISLK 2143
Query: 76 IQ-----------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
Q D G + +A V + +T +N P F+ Y VPE L
Sbjct: 2144 KQFESDTLNKEYLITVVAKDGGNPAFSAEVMVPITVMNKAMPVFEKPFYSAEVPENVQ-L 2202
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
VH AD + V+YS+ + P F V+ NTG I LD+E Y
Sbjct: 2203 HSPVVH-IQADSPEGFKVFYSITDGDPFSQFTVNFNTGVISVIAPLDFESHPAY 2255
Score = 42.7 bits (99), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 28/166 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA----ASYFNLDP-------ATEHQGPIQ 77
+G ++QV A DKD GK V Y + A + F +DP A E Q
Sbjct: 1576 VGSVVLQVTALDKDKGKNAEVLYSIESGIFGALRNIGNSFTIDPILGSIKTAKELDRESQ 1635
Query: 78 ----------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHA 125
D+G +S A+V + +T ++ +P+F S Y + E + +G
Sbjct: 1636 VEYDLMVKATDQGNPPMSEIASVRVFITVADNASPKFTSKEYSVEISE---TVGIGSFVG 1692
Query: 126 TDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
T Q++VVY +I F ++ ++G I T KALD+E +Y
Sbjct: 1693 TVTAHSQSSVVYEIKDGNIGDAFDINPHSGSIITQKALDFETVPVY 1738
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 32/172 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ----------- 77
+G ++M V A D+D+G+ G V Y + D + F +D E G ++
Sbjct: 1048 VGFSIMTVSAHDEDTGRDGEVRYSIRDGS--GVGVFRID---EETGVVETAERLDRESTP 1102
Query: 78 ---------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHA 125
D G LSS + I V D+ND P+ Y + E ++V + A
Sbjct: 1103 HYWLTVYATDRGVVPLSSFVEIYIEVEDVNDNAPQTSEPVYYPEIIENSPKDVSVVHIEA 1162
Query: 126 TDADEGQNAVVYYSVPEDIP---FVVDANTGDI-RTNKALDYEKQQLYLERV 173
D D N + Y + P F V TG I T++ LD E+Q ++ V
Sbjct: 1163 FDPDSSSNDKLMYKITSGNPQGFFSVHPKTGLITTTSRKLDREQQDEHILEV 1214
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFS--VPEGQDGLAVGRVHATDADEGQNAVVYYSVPE 142
A V IRV DIND P F YE S +P + G+ V V+ATDAD + V YS+ E
Sbjct: 1868 ANVTIRVIDINDCPPVFSKSLYEASLLLPTYR-GVKVITVNATDADSSAFSQVMYSITE 1925
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVY 137
+G + V I+V D ND P+F + YE +PE + ++ A D DE +N ++Y
Sbjct: 1432 DGTTAVLTQVFIKVIDTNDHRPQFSASKYEVVIPEDTVPETEILQISAVDKDE-KNKLIY 1490
Query: 138 YSVPEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERVFL 175
P F +D TG + T++ LD+E ++ V +
Sbjct: 1491 TLQGSVDPLSVRKFRLDPATGSLFTSETLDHEAVHQHILTVMV 1533
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 34/178 (19%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-- 70
TS+ ++Y + + + V+++ ++A D DS + Y++ N +F++ P T
Sbjct: 1138 TSEPVYYPEIIENSPK-DVSVVHIEAFDPDSSSNDKLMYKITSGNPQG--FFSVHPKTGL 1194
Query: 71 --------------EH--QGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH + + D G S+ A V +++ D ND P+F Y+ +P
Sbjct: 1195 ITTTSRKLDREQQDEHILEVTVTDNGIPPKSTIARVIVKILDENDNKPQFLQKFYKIRLP 1254
Query: 113 EGQDGLA--------VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNK 159
E + + RV ATD DEG NA + YS+ E F ++ TG + + K
Sbjct: 1255 ERERPERERNAKREPLYRVIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTGVVSSKK 1312
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 89 NIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV-----PE 142
+I V DIND P F Y ++ E G +V +V ATD+D N + Y +
Sbjct: 2275 DIIVEDINDSPPVFVHQSYATTLSEASVIGTSVVQVRATDSDSEPNRGISYHMFGNHSKS 2334
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
F +D++TG I + LDYE+ Q + ++F+
Sbjct: 2335 HDHFHIDSSTGLISLVRTLDYEQFQQH--KIFV 2365
Score = 35.4 bits (80), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 39/189 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y A+ + L +++ V A D D + Y ++D N S F +DP +G ++
Sbjct: 3345 YTAVVSEDALLEQSVITVMADDADGPSNSHIRYSIIDGN--QGSPFTVDPT---RGEVKV 3399
Query: 78 ----DEGGLS-----------------STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
D +S +T TVNI V+D+ND P F Y + E +
Sbjct: 3400 TKLLDRETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSKGNYSVIIQENKP 3459
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
G +V ++ +D D N PF +G+ ++A + +Q + L +
Sbjct: 3460 VGFSVLQLVVSDKDSSHNGP---------PFFFSVVSGN--DDRAFEVNQQGVLLTSAAI 3508
Query: 176 ISKFATSYL 184
K YL
Sbjct: 3509 KRKVKDHYL 3517
>gi|417407147|gb|JAA50198.1| Putative cadherin egf lag seven-pass g-type receptor [Desmodus
rotundus]
Length = 4593
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 86/172 (50%), Gaps = 21/172 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL--------DNNTDAASYFN-LDP 68
++ ++ DK E+ ++QV+ATD+D G G V Y LL D+ T + LDP
Sbjct: 825 YFVEVSEDK-EVNSEIIQVEATDRDLGPNGQVTYSLLTDTDTFSIDSVTGVVTVVRPLDP 883
Query: 69 ATEHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
+H ++ +E L ST + + V D+ND P F Y V E +G
Sbjct: 884 EVQHVHYLKVEARDQATEEPQLFSTVLLKVSVEDVNDNPPRFIPPNYRVKVREDLPEGTI 943
Query: 120 VGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ + A D D GQ++ V YS+ P + F VD +G +R + LD+EK+Q+Y
Sbjct: 944 IMWLEAYDPDLGQSSQVRYSLLDPGEGNFDVDKLSGAVRIVQQLDFEKKQVY 995
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 72/160 (45%), Gaps = 23/160 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG---- 74
G +MQV ATD D + Y L A F L+P T E Q
Sbjct: 3037 GKLIMQVSATDADIRSNAEITYTLFG---PGAEKFKLNPDTGELKTLAPLDREEQAVYHL 3093
Query: 75 --PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D GG A + + + D+ND PEF + PY +V E + G + RV ATD D G
Sbjct: 3094 VVKATDGGGRFCQANIVLTLDDVNDNAPEFSADPYTMTVFENTEPGTLLTRVQATDPDAG 3153
Query: 132 QNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
N + YS+P+ D F + ++G I+ K LD E Q +Y
Sbjct: 3154 LNRKIVYSLPDSADGQFSISESSGIIQLEKPLDRELQAVY 3193
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI-- 76
L +++V ATD DSG +G + Y ++++ Y N LD + I
Sbjct: 2505 LHTLVVEVPATDGDSGVYGDITYHIVNDFAKDRFYTNERGQIFTLEKLDREIPAEKVIAV 2564
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEG 131
+D GG + T+N+ +TD ND P+F++ YE ++ G +V +V A+DADEG
Sbjct: 2565 RLMAKDAGGKVAFCTINVILTDDNDNAPQFRATKYEVNIGSNAPKGTSVIKVLASDADEG 2624
Query: 132 QNAVVYYSVPED 143
NA V Y++ D
Sbjct: 2625 SNADVTYAIEAD 2636
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 76/171 (44%), Gaps = 29/171 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G ++QV A +D + Y ++ N F++DP T
Sbjct: 3233 YSASVSEDTLIGTEVLQVYAASRDIEANAEITYSIISGNEHGK--FSIDPRTGAIFLIES 3290
Query: 71 -----EHQGPIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL- 118
H+ + E GG LS ATVN+ VTDIND P F PY + E D +
Sbjct: 3291 LDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDPYTAVISE--DAVL 3348
Query: 119 --AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
V V A DAD N+ ++YS+ + PF +D G+++ K LD E
Sbjct: 3349 EQPVITVMADDADGPLNSHIHYSIIDGNQGSPFTIDPARGEVKVTKLLDRE 3399
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 72/141 (51%), Gaps = 14/141 (9%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKN 99
D+ SGK L + LD+ T F++ P DE + ++ V+I+V D ND +
Sbjct: 2752 DRQSGKLKL--EKALDHETTKWYQFSI---LARCTPEDDE--VVASVDVSIQVKDANDNS 2804
Query: 100 PEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV----PEDI--PFVVDANT 152
P +S PYE + E Q G + V +V A+D D G N V YS+ DI F ++ T
Sbjct: 2805 PVLESNPYEAFIVENQPGGSRVIQVRASDLDSGTNGQVMYSLDPSQSVDITESFAINMET 2864
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G I T K LD+EK+ Y +V
Sbjct: 2865 GWITTLKELDHEKRDNYQIKV 2885
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE 142
++ V ++V N PEF Y+ S E G V V A D DEG+N V YS+
Sbjct: 443 ASTRVLVKVLSANSNAPEFTQTAYKASFDENVPIGTTVMSVSAADPDEGENGYVTYSIAN 502
Query: 143 --DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSY 183
+PFV+D TG +RT+ LDYE + RV+ + A+ +
Sbjct: 503 LNPVPFVIDHFTGAVRTSAVLDYE----LMPRVYTLRIRASDW 541
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 73/160 (45%), Gaps = 23/160 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------- 71
Y A + +G +++QV+ATD DS V Y + N++ + +F++D +T
Sbjct: 2286 YAATLSEASVIGTSVVQVRATDSDSEPNRGVSYHMFGNHSKSYDHFHVDSSTGLISLVRT 2345
Query: 72 ------HQGPI---QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
HQ I +GG LSS V + VTD+ND P F YE + E G
Sbjct: 2346 LDYEQVHQHKIFVRAIDGGMPPLSSDVIVTVDVTDLNDNPPLFDQQIYEARISEHAMHGH 2405
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
V V A DAD + YS+ + FV+D+ TG I
Sbjct: 2406 FVTCVKAYDADSSDVDKLEYSILSGNDHKNFVMDSETGII 2445
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 76/169 (44%), Gaps = 33/169 (19%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ---------- 77
E G L +V+ATD D+G + Y L D+ A F++ +E G IQ
Sbjct: 3137 EPGTLLTRVQATDPDAGLNRKIVYSLPDS---ADGQFSI---SESSGIIQLEKPLDRELQ 3190
Query: 78 ----------DEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRV 123
D+G L++T+TV + V DIND P F+ Y SV E G V +V
Sbjct: 3191 AVYTLTLKATDQGLPRRLTATSTVVVSVLDINDNPPVFEYREYSASVSEDTLIGTEVLQV 3250
Query: 124 HATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+A D NA + YS+ E F +D TG I ++LDYE Y
Sbjct: 3251 YAASRDIEANAEITYSIISGNEHGKFSIDPRTGAIFLIESLDYESSHEY 3299
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVY 137
+G +S A V ++V D ND +P + Y ++PE G + +V ATDAD NA +
Sbjct: 2998 DGTFASKAIVEVKVLDANDNSPVCEKTLYSDTIPEDAFPGKLIMQVSATDADIRSNAEIT 3057
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ P F ++ +TG+++T LD E+Q +Y
Sbjct: 3058 YTLFGPGAEKFKLNPDTGELKTLAPLDREEQAVY 3091
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 19/177 (10%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQG 74
+L G ++ +G +++ V ATD D+G G + Y + N D+ ++D +
Sbjct: 717 TLPAGIEVKENRPVGSSIVLVNATDLDTGFNGKLVYAISGGNEDSCFLIDMDTGMLKILS 776
Query: 75 PIQDEG-------------GLSSTATVN---IRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
P+ E G+ A + +RV D ND PEF Y V E ++
Sbjct: 777 PLDRETTDKYTLNITVSDLGIPQKAAWHLLAVRVLDANDNPPEFFQESYFVEVSEDKEVN 836
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ +V ATD D G N V YS+ D F +D+ TG + + LD E Q ++ +V
Sbjct: 837 SEIIQVEATDRDLGPNGQVTYSLLTDTDTFSIDSVTGVVTVVRPLDPEVQHVHYLKV 893
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 70/162 (43%), Gaps = 28/162 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASY--FNLDPATE-------------HQGPI- 76
++Q+ A DKD K L+ L ++ D S F LDPAT HQ +
Sbjct: 1473 ILQISAVDKDE-KNKLI--YTLQSSIDPLSLKKFRLDPATGSLYTAEALDHEAVHQHVLT 1529
Query: 77 -----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE 130
QD + + + V+D ND P F S YE V E G V +V A D D+
Sbjct: 1530 VMVRDQDVPVKRNFVRIVVNVSDTNDHAPWFTSSSYEGRVYESAATGSVVLQVTALDKDK 1589
Query: 131 GQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
G+NA V YS+ F +D G I+T K LD Q Y
Sbjct: 1590 GRNAEVVYSIESGNIGNSFTIDPILGSIKTAKELDRSNQVEY 1631
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 34/178 (19%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-- 70
TS+ ++Y + + + V+++Q+ A D DS + Y++ N +F++ P T
Sbjct: 1137 TSEPVYYPEVMENSPK-DVSVVQIDALDPDSSSSDKLTYKITSGNPQG--FFSIHPRTGL 1193
Query: 71 --------------EH--QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH + + D G S+ A V +++ D ND P+F Y+ +P
Sbjct: 1194 ITTTSRRLDREQQDEHILEVTVTDNGSPPRSTVARVIVKILDENDNKPQFLQKFYKIRLP 1253
Query: 113 EGQD--------GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNK 159
E + + RV ATD DEG NA + YS+ E F ++ TG + + K
Sbjct: 1254 EREKPERERTTKREPIYRVIATDKDEGPNAEISYSIEEGNEHGRFFIEPKTGLVSSKK 1311
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 77/184 (41%), Gaps = 36/184 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLD---------- 67
Y A + G ++QV+A+D DSG G V Y L + D F ++
Sbjct: 2812 YEAFIVENQPGGSRVIQVRASDLDSGTNGQVMYSLDPSQSVDITESFAINMETGWITTLK 2871
Query: 68 --------------PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
A++H +Q LSSTA V++ VTD+ND P F + Y+ +V E
Sbjct: 2872 ELDHEKRDNYQIKVVASDHGEKVQ----LSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSE 2927
Query: 114 GQ-DGLAVGRVHATDAD--EGQNAVVYYSVPEDI--PFVVD--ANTGDIRTNKALDYEKQ 166
G + + TDAD E V YY D F V+ + + + LD E+Q
Sbjct: 2928 DDPPGGVIAILSTTDADSEEINRQVTYYITGGDPLGQFAVENVQSEWKVYVKEPLDRERQ 2987
Query: 167 QLYL 170
YL
Sbjct: 2988 DSYL 2991
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 57/144 (39%), Gaps = 2/144 (1%)
Query: 37 KATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIN 96
KA + G F + R NT + D T ++ + V ++V D N
Sbjct: 82 KAEEYLLGDFCFLRIRTKGGNTAILNREVKDHYTLIVKALEKNSNAEARTVVRVQVLDTN 141
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGD 154
D P F Y S+PE ++ RV ATDAD G N YYS + F + +G
Sbjct: 142 DLRPLFSPTSYSVSLPENTAIRTSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGT 201
Query: 155 IRTNKALDYEKQQLYLERVFLISK 178
I LD+ + Y + + +
Sbjct: 202 IVLTGRLDHAETPRYEMEILAVDR 225
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 11/101 (10%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR--------VHATDADEG 131
GLS+ +TV + + D ND P F Y + E +V + ATDAD
Sbjct: 1741 AGLSTNSTVLVHLQDENDNAPVFTQAEYTGRISESASINSVVLTDKNVPLVIRATDADRE 1800
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
NA++ Y + E F +D++TG I T +LDYE+ +
Sbjct: 1801 SNALLVYHIVEPSVHKYFAIDSSTGAIHTVLSLDYEETSTF 1841
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 75/178 (42%), Gaps = 34/178 (19%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
+L Y A+ + +G + V A D+DSGK G V Y L +++ +F + P+ E
Sbjct: 2081 NLPYYAVVKVDAAVGHIIRHVTAVDRDSGKNGEVHYYLKEHH----EHFEIGPSGEISLK 2136
Query: 76 IQ-----------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
Q D G + +A V + +T +N P F+ Y +PE
Sbjct: 2137 KQFEPDTLNKQYLVTVVAKDGGNPAFSAEVLVPITVMNRAMPVFEKPFYSAEIPENI--- 2193
Query: 119 AVGRVHA----TDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+VH+ A+ + V+YS+ + P F ++ NTG I LD+E Y
Sbjct: 2194 ---QVHSPVVHIQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAPLDFESHPAY 2248
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 74/183 (40%), Gaps = 31/183 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD---NNTDA--------------- 60
Y R+ G +M ++A D D G+ V Y LLD N D
Sbjct: 930 YRVKVREDLPEGTIIMWLEAYDPDLGQSSQVRYSLLDPGEGNFDVDKLSGAVRIVQQLDF 989
Query: 61 --ASYFNLDPATEHQG-PIQDEGGLSSTATVNIRVTDINDK--NPEFQSLPYEFSVPEGQ 115
+NL + +G P+ LSST V + V D+N+ P F S + V E
Sbjct: 990 EKKQVYNLTVRAKDKGKPV----SLSSTCYVEVEVIDVNENLHPPVFPSFVEKAVVKEDV 1045
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
G +V V A D D G++ + YS+ + F +D TG I T+ LD E Y
Sbjct: 1046 PIGSSVMTVSAHDEDTGRDGEIRYSIRDGSGVGVFKIDEETGVIETSDRLDRESAPHYWL 1105
Query: 172 RVF 174
V+
Sbjct: 1106 TVY 1108
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 26/161 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------ATEHQGPIQ----- 77
G ++QV A DKD G+ V Y + N + F +DP A E Q
Sbjct: 1576 GSVVLQVTALDKDKGRNAEVVYSIESGNI--GNSFTIDPILGSIKTAKELDRSNQVEYDL 1633
Query: 78 -----DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADE 130
D+G +S +V++ VT ++ +P+F S Y + E + +G
Sbjct: 1634 IVKATDKGSPPMSEITSVHVFVTIADNASPKFTSKEYSVEISET---IGIGSFVGMVTAH 1690
Query: 131 GQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
Q++VVY ++ F ++ ++G I T KALD+E +Y
Sbjct: 1691 SQSSVVYEIKDGNVADAFDINPHSGSIITQKALDFEALPVY 1731
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 76/182 (41%), Gaps = 33/182 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y A+ + L ++ V A D D + Y ++D N S F +DPA +G ++
Sbjct: 3338 YTAVISEDAVLEQPVITVMADDADGPLNSHIHYSIIDGN--QGSPFTIDPA---RGEVKV 3392
Query: 78 -------------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
D G ++T TVNI V+D+ND P F Y + E +
Sbjct: 3393 TKLLDRETISGYTLTVQASDNGSPPRANTTTVNIDVSDVNDNAPVFSRENYSVIIQENKP 3452
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLYLE 171
G +V ++ TD D N ++ E D F V+ G + T+ A+D + YL
Sbjct: 3453 VGFSVLQLLVTDRDSSHNGPPFFFTIESGNDDSAFEVNQR-GVLLTSAAMDRRVKDHYLL 3511
Query: 172 RV 173
RV
Sbjct: 3512 RV 3513
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G + V+I V D+ND P F Y ++ E G +V +V ATD+D N V Y
Sbjct: 2260 GAHAEVFVDIVVEDVNDNPPVFVQQSYAATLSEASVIGTSVVQVRATDSDSEPNRGVSYH 2319
Query: 140 VPEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERVFL 175
+ + F VD++TG I + LDYE Q++ ++F+
Sbjct: 2320 MFGNHSKSYDHFHVDSSTGLISLVRTLDYE--QVHQHKIFV 2358
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V I+V D ND P+F + YE +PE + ++ A D DE +N ++Y P
Sbjct: 1440 VFIKVIDTNDHRPQFSTSKYEVVIPEDTAPETEILQISAVDKDE-KNKLIYTLQSSIDPL 1498
Query: 146 ----FVVDANTGDIRTNKALDYEKQQLYLERVFL 175
F +D TG + T +ALD+E ++ V +
Sbjct: 1499 SLKKFRLDPATGSLYTAEALDHEAVHQHVLTVMV 1532
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 77/185 (41%), Gaps = 32/185 (17%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
S A+ ++ +G ++M V A D+D+G+ G + Y + D + F +D E G
Sbjct: 1034 SFVEKAVVKEDVPIGSSVMTVSAHDEDTGRDGEIRYSIRDGS--GVGVFKID---EETGV 1088
Query: 76 IQ--------------------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
I+ D+G LSS + + V D+ND P Y V E
Sbjct: 1089 IETSDRLDRESAPHYWLTVYATDQGVVPLSSFVEIYVEVEDVNDNAPRTSEPVYYPEVME 1148
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDI-RTNKALDYEKQQL 168
++V ++ A D D + + Y + P F + TG I T++ LD E+Q
Sbjct: 1149 NSPKDVSVVQIDALDPDSSSSDKLTYKITSGNPQGFFSIHPRTGLITTTSRRLDREQQDE 1208
Query: 169 YLERV 173
++ V
Sbjct: 1209 HILEV 1213
Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 58/137 (42%), Gaps = 27/137 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--------------TDAASYF 64
Y A + +G T+M V A D D G+ G V Y + + N T A +
Sbjct: 466 YKASFDENVPIGTTVMSVSAADPDEGENGYVTYSIANLNPVPFVIDHFTGAVRTSAVLDY 525
Query: 65 NLDP--------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
L P A++ P + E + +T T+N ++ND P F+ + E ++P
Sbjct: 526 ELMPRVYTLRIRASDWGLPYRREVEVLATLTLN----NLNDNRPLFEKINCEGTIPRDLG 581
Query: 117 -GLAVGRVHATDADEGQ 132
G + V A DADE Q
Sbjct: 582 VGEQITTVSAIDADELQ 598
>gi|124487065|ref|NP_001074855.1| cadherin-19 precursor [Mus musculus]
Length = 770
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 29/179 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------E 71
Y A+ + G +++V A D D G R+L N YF+++P T +
Sbjct: 151 YEAIVPEMSPEGTFVIKVTANDADDPSTGY-HARILYNLERGQPYFSVEPTTGVIRISSK 209
Query: 72 HQGPIQDE--------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD- 116
+QD G LS T TV+I+++DIND P F+ Y F++ E
Sbjct: 210 MDRELQDTYCVIIQAKDMLGQPGALSGTTTVSIKLSDINDNKPIFKESFYRFTISESAPI 269
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPED----IPFVVDANT--GDIRTNKALDYEKQQLY 169
G ++G++ A D D G+NA + YS+ +D ++D +T G + K +D+E+Q Y
Sbjct: 270 GTSIGKIMAYDDDIGENAEMEYSIEDDDSKIFDIIIDNDTQEGIVILKKKVDFEQQSYY 328
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
IRV DIND P F PYE VPE +G V +V A DAD+ G +A + Y++ P
Sbjct: 134 IRVLDINDNEPRFLDEPYEAIVPEMSPEGTFVIKVTANDADDPSTGYHARILYNLERGQP 193
Query: 146 -FVVDANTGDIRTNKALDYEKQQLYL 170
F V+ TG IR + +D E Q Y
Sbjct: 194 YFSVEPTTGVIRISSKMDRELQDTYC 219
Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
+ST + ++V D D+ P F Y +PEG+ G VG V ATD D Q+ + YY
Sbjct: 350 ASTTYIKVQVED-EDEPPVFLLPYYILEIPEGKPYGTIVGTVSATDPDRRQSPMRYYLTG 408
Query: 142 EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ F ++ N G I T LD E Y
Sbjct: 409 SKM-FDINDN-GTIITTNMLDREVSAWY 434
>gi|449475315|ref|XP_002186680.2| PREDICTED: protocadherin-1 [Taeniopygia guttata]
Length = 1193
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 80/162 (49%), Gaps = 22/162 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQGP 75
+M+V ATD DSG + Y L+ + + S F +DP + E
Sbjct: 657 VMEVSATDADSGSNAKLVYSLVTDPSSKGS-FTIDPDSGEIRVKAVLDREQRERYEFLVV 715
Query: 76 IQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQ 132
+D+G S TA+V I V D ND +P+F Y FSV E L+ VG V DAD+G+
Sbjct: 716 AEDKGSPSKQGTASVAINVMDRNDNDPKFMLSGYNFSVMENMPPLSPVGMVTVIDADKGE 775
Query: 133 NAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYLERV 173
NA + SV +D FV+ TG I ++ + D E+Q Y R+
Sbjct: 776 NARIQLSVEQDNGDFVIQNGTGTILSSISFDREQQSTYTFRL 817
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
LSST ++ ++V D+ND P F E + PE + V V ATDAD G NA + YS+
Sbjct: 618 LSSTNSLKVQVMDVNDNAPVFSQSFTEVAFPENNEPDELVMEVSATDADSGSNAKLVYSL 677
Query: 141 PEDI----PFVVDANTGDIRTNKALDYEKQQLY 169
D F +D ++G+IR LD E+++ Y
Sbjct: 678 VTDPSSKGSFTIDPDSGEIRVKAVLDREQRERY 710
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 78/191 (40%), Gaps = 41/191 (21%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQG 74
Y A + +G +++QVKA D D G ++Y + LD AT QG
Sbjct: 416 LYEAELSENSPVGHSVLQVKANDSDQGANAEIDYSFHQASDMVRRLLRLDRATGLITVQG 475
Query: 75 PI--------------QDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQDGL 118
PI +D+G +A + VT D+ND P + + QDG+
Sbjct: 476 PIDREDIGTLKFSVMAKDKGANPKSARTQVVVTIKDMNDNAPSIEI--RGIGLVTHQDGM 533
Query: 119 A-----------VGRVHATDADEGQNAVVYYSVPEDIPFVVD--ANTGD-------IRTN 158
A V V +D DEG+NAVV V D+PF + + TG ++T
Sbjct: 534 ANISEDVPVETAVALVQVSDRDEGENAVVTCVVAGDVPFQLRQASETGSDSKKKYFLQTT 593
Query: 159 KALDYEKQQLY 169
LDYE + Y
Sbjct: 594 TPLDYESVKEY 604
Score = 42.7 bits (99), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 68/158 (43%), Gaps = 32/158 (20%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--QGP-------------------- 75
A D+DSG G+ Y L+ +A F L A + + P
Sbjct: 324 AMDRDSGPNGVASYELM-AGPEAQELFGLQVAEDQDEKQPQLIVMGNLDREQWDSYDLTI 382
Query: 76 -IQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+QD G +S+A + I + D+ND P+F+ YE + E G +V +V A D+D+G
Sbjct: 383 KVQDGGNPPRASSALLRITILDMNDNAPKFEKALYEAELSENSPVGHSVLQVKANDSDQG 442
Query: 132 QNAVVYYSVPEDIPFV-----VDANTGDIRTNKALDYE 164
NA + YS + V +D TG I +D E
Sbjct: 443 ANAEIDYSFHQASDMVRRLLRLDRATGLITVQGPIDRE 480
Score = 35.8 bits (81), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLP----YEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
S+ V I V D ND P F + P Y+ +P G V +V A D D G NA + Y
Sbjct: 828 SAYVGVTINVLDENDNAP-FITSPSNATYKHILPHTSPGQQVSKVKAEDIDSGINAELIY 886
Query: 139 SVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
S+ P F + +GDI K + + L+
Sbjct: 887 SITGGNPFELFQISPQSGDITLEKEILRKHHGLH 920
>gi|345313200|ref|XP_003429354.1| PREDICTED: protocadherin-1 [Ornithorhynchus anatinus]
Length = 681
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 77/165 (46%), Gaps = 22/165 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-----------------ATEH 72
G + QV ATD D+G V Y L + A F++ P A E
Sbjct: 124 GELVAQVAATDADAGSNAEVVYSL-EPEPAARDLFSITPDSGQIRVLASLDREQREAYEL 182
Query: 73 QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
+ D G L TATV ++V D ND +P+F Y FSV E L+ VG V DAD
Sbjct: 183 KVLAADRGSPSLQGTATVAVKVLDRNDNDPKFMLNGYNFSVMENMPALSPVGMVTVLDAD 242
Query: 130 EGQNAVVYYSV-PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
EG NA V SV P+ F+V TG I ++ + D E+Q Y R+
Sbjct: 243 EGANAHVRLSVEPDSGDFIVQNGTGTILSSLSFDREQQSTYTFRL 287
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LSST ++ ++V D+ND P F E ++PE G V +V ATDAD G NA V YS+
Sbjct: 88 LSSTNSLKVQVVDVNDNAPVFAQALTEVAIPENNVPGELVAQVAATDADAGSNAEVVYSL 147
Query: 141 -PEDIP---FVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATS 182
PE F + ++G IR +LD E+++ Y +V + + S
Sbjct: 148 EPEPAARDLFSITPDSGQIRVLASLDREQREAYELKVLAADRGSPS 193
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 88 VNIRVTDINDKNPEFQSLP----YEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPED 143
V I V D ND P F + P + P+ + G VG+V A D D G NA + +S+
Sbjct: 303 VTINVLDENDNAP-FVTAPSNASHRLLAPQTRPGQTVGQVAAEDIDAGSNAELAFSIAGG 361
Query: 144 IP---FVVDANTGDIRTNKALDYEKQQLY 169
P F + A +G I K L L+
Sbjct: 362 NPYGLFRIGAQSGAITLEKELGRRHHGLH 390
>gi|301770611|ref|XP_002920723.1| PREDICTED: protocadherin Fat 1-like [Ailuropoda melanoleuca]
Length = 4587
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 74/160 (46%), Gaps = 23/160 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG---- 74
G ++QV ATD D + Y LL A F L+P T E QG
Sbjct: 3038 GQLILQVSATDADIRSNAEITYTLLG---PGAEKFTLNPDTGELRTLAPLDREEQGVYNL 3094
Query: 75 --PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D GG S A + + + D+ND PEF + PY +V E + G + RV ATD D G
Sbjct: 3095 LVKATDGGGRSCQANLVLTLEDVNDNAPEFSADPYTITVFENTEPGTLLTRVQATDRDSG 3154
Query: 132 QNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
N + YS+ + F ++ +G I+ K LD E+Q +Y
Sbjct: 3155 LNRKISYSLVNSVDGQFSINELSGIIQLEKPLDREQQAVY 3194
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI-- 76
L +++VKA D DSG +G + Y ++++ Y N LD T + I
Sbjct: 2506 LHTLVIEVKAADGDSGIYGHITYHIVNDFAKDRFYTNERGQIFTLEKLDRETPVEKVISV 2565
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEG 131
+D GG + T+N+ +TD ND P+F++ YE + G +V +V A+DADEG
Sbjct: 2566 RLMAKDAGGKVAFCTINVILTDDNDNAPQFRATRYEVDIGSNAPKGTSVIKVLASDADEG 2625
Query: 132 QNAVVYYSVPED 143
NA V Y++ D
Sbjct: 2626 SNADVTYAIEAD 2637
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 87/176 (49%), Gaps = 29/176 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
++ ++ DK E+ ++QV+ATDKD G G V Y +L +TD F++D T
Sbjct: 826 YFVEVSEDK-EINSEIIQVEATDKDLGPNGHVTYSVL-TDTDK---FSIDGVTGVVKVMR 880
Query: 71 --------------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
E + ++E L ST + + + D+ND P+F Y V E
Sbjct: 881 PLDREAQHVHYLKIEARDQAREEPQLLSTVLLKVSLEDVNDNPPKFVPPNYRVKVREDLP 940
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
+G + + A D D GQ++ V YS+ + + F VD +G +R + LD+EK+Q+Y
Sbjct: 941 EGTIIMWLEAYDPDLGQSSQVRYSLLDHGEGHFDVDKLSGAVRIVQHLDFEKKQVY 996
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 76/171 (44%), Gaps = 29/171 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
YGA + +G ++QV A +D + Y ++ N F++D T I++
Sbjct: 3234 YGATVSEDVLIGTEVLQVYAVSRDIEANAEITYSIMSGNEHGK--FSIDSRTGAIFVIEN 3291
Query: 79 ----------------EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL- 118
+GG LS ATV+I VTDIND +P F Y V E D L
Sbjct: 3292 LDYESSREYYLTIEAMDGGTPSLSDVATVSINVTDINDNSPVFSQDTYTAVVSE--DALL 3349
Query: 119 --AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
+V V A DAD N+ + YS+ + PF VD G+++ K LD E
Sbjct: 3350 EQSVITVMADDADGPSNSHIRYSIIDGNQGSPFTVDPTRGEVKVTKLLDRE 3400
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 19/173 (10%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQGPIQD 78
G ++ H +G +++ + ATD D+G G + Y + N D+ +++ + P+
Sbjct: 722 GIEVKENHPVGSSIIFMNATDLDTGFNGKLVYAISGGNEDSCFIIDMETGMLKILSPLDR 781
Query: 79 EG-------------GLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
E G+ A +++RV D ND PEF Y V E ++ +
Sbjct: 782 ETTDKYTLNVTVSDLGIPQKAAWRLLDVRVLDANDNPPEFLQESYFVEVSEDKEINSEII 841
Query: 122 RVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYLERV 173
+V ATD D G N V YSV D F +D TG ++ + LD E Q ++ ++
Sbjct: 842 QVEATDKDLGPNGHVTYSVLTDTDKFSIDGVTGVVKVMRPLDREAQHVHYLKI 894
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVY 137
+G SS A V ++V D ND +P + Y +VPE G + +V ATDAD NA +
Sbjct: 2999 DGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTVPEDASPGQLILQVSATDADIRSNAEIT 3058
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ P F ++ +TG++RT LD E+Q +Y
Sbjct: 3059 YTLLGPGAEKFTLNPDTGELRTLAPLDREEQGVY 3092
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 75/163 (46%), Gaps = 21/163 (12%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ---------- 77
E G L +V+ATD+DSG + Y L+++ S L + + P+
Sbjct: 3138 EPGTLLTRVQATDRDSGLNRKISYSLVNSVDGQFSINELSGIIQLEKPLDREQQAVYSLT 3197
Query: 78 ----DEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
D+G L++T TV + V DIND P F+ Y +V E G V +V+A D
Sbjct: 3198 LKAVDQGLPRRLTATGTVVVSVLDINDNPPVFEYRDYGATVSEDVLIGTEVLQVYAVSRD 3257
Query: 130 EGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
NA + YS+ E F +D+ TG I + LDYE + Y
Sbjct: 3258 IEANAEITYSIMSGNEHGKFSIDSRTGAIFVIENLDYESSREY 3300
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 14/137 (10%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKN 99
D+ SG+ L + LD+ F++ H D+ + ++ V+I+V D ND +
Sbjct: 2753 DRQSGRLKL--EKSLDHEITKWYQFSILARCTH-----DDYEVVASVDVSIQVKDANDNS 2805
Query: 100 PEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI------PFVVDANT 152
P +S PYE F V G V +V A+D D G N V YS+ + F ++ T
Sbjct: 2806 PVLESNPYEAFIVENLPAGSRVIQVRASDLDSGTNGQVTYSLDQSQSMEVIESFAINVET 2865
Query: 153 GDIRTNKALDYEKQQLY 169
G I T K LD+EK+ Y
Sbjct: 2866 GWITTLKELDHEKRDSY 2882
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 71/162 (43%), Gaps = 28/162 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASY--FNLDPATE-------------HQGPI- 76
++Q+ A DKD K L+ L + D S F LDPAT HQ +
Sbjct: 1474 ILQISAVDKDE-KNKLI--YTLQGSVDPLSVRKFRLDPATGSLFTSETLDHEAVHQHILT 1530
Query: 77 -----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
QD + A + + V+D ND P F S YE V E G V +V A D D+
Sbjct: 1531 VMVRDQDVPVKRNFARIIVNVSDTNDHAPWFTSSSYEGRVYESAAVGSVVLQVTALDKDK 1590
Query: 131 GQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
G+NA V YS+ F +D G I+T K LD E Q Y
Sbjct: 1591 GKNAEVLYSIESGNIGNSFTIDPILGSIKTAKELDRESQVEY 1632
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 60/144 (41%), Gaps = 2/144 (1%)
Query: 37 KATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIN 96
KA + G F + R NT + D T ++ + A V ++V D N
Sbjct: 83 KAEEYILGDFCFLRIRTKGGNTAILNREVKDHYTLIVKAVEKNTNAEARAKVRVQVLDTN 142
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGD 154
D P F Y S+PE +V RV ATDAD G N YYS + F + +G
Sbjct: 143 DLRPLFSPTSYSVSLPENTAMRTSVARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGA 202
Query: 155 IRTNKALDYEKQQLYLERVFLISK 178
+ LDY + +LY + + +
Sbjct: 203 VVLTGRLDYAETKLYELEILAVDR 226
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 16/126 (12%)
Query: 61 ASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
AS+F L+ T + ++ V ++V N PEF Y+ S E G
Sbjct: 430 ASHFELEVTTSDR---------RASTRVLVKVLSANSNPPEFTQSAYKASFDENVPIGTT 480
Query: 120 VGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
V V A D DEG+N V YS+ +PFV++ TG + T++ LDYE + RV+ +
Sbjct: 481 VMSVSAVDPDEGENGYVTYSIANLNHVPFVINHFTGAVSTSEDLDYE----LMPRVYTLR 536
Query: 178 KFATSY 183
A+ +
Sbjct: 537 IRASDW 542
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 23/160 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + +G +++QV+ATD DS + Y + N++ + +F++D +T
Sbjct: 2287 YATTLSEASVIGTSVVQVRATDSDSEPNRGISYHMFGNHSKSHDHFHIDSSTGLISLVRT 2346
Query: 71 -------EHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
+H+ ++ +GG LSS V + VTD+ND P F YE + E G
Sbjct: 2347 LDYEQFQQHKIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFDQHIYEARISEHAIHGH 2406
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
V V A DAD + YS+ + FV+D TG I
Sbjct: 2407 FVTCVKAYDADSSDVDKLDYSILSGNDHKNFVIDRVTGII 2446
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 26/162 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------ATEHQGPIQ---- 77
+G ++QV A DKD GK V Y + N + F +DP A E Q
Sbjct: 1576 VGSVVLQVTALDKDKGKNAEVLYSIESGNI--GNSFTIDPILGSIKTAKELDRESQVEYD 1633
Query: 78 ------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDAD 129
D+G +S A+V + +T ++ +P+F S Y + E + +G T
Sbjct: 1634 LMVKATDQGNPPMSEIASVRVFITVADNASPKFTSKEYSVEISE---TVGIGSFVGTVTA 1690
Query: 130 EGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
Q++VVY +I F ++ ++G I T KALD+E +Y
Sbjct: 1691 HSQSSVVYEIKDGNIGDAFDINPHSGSIITQKALDFETVPVY 1732
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 76/182 (41%), Gaps = 29/182 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y R+ G +M ++A D D G+ V Y LLD+ +F++D + +Q
Sbjct: 931 YRVKVREDLPEGTIIMWLEAYDPDLGQSSQVRYSLLDH---GEGHFDVDKLSGAVRIVQH 987
Query: 78 ----------------DEG---GLSSTATVNIRVTDINDK--NPEFQSLPYEFSVPEGQD 116
D+G LSST V + V D+N+ P F S + V E
Sbjct: 988 LDFEKKQVYNLTVRAKDKGKPVSLSSTCYVEVEVIDVNENLHPPVFSSFVEKGVVKEDVP 1047
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLER 172
G ++ V A D D G++ V YS+ + F +D TG + T + LD E Y
Sbjct: 1048 VGFSIMTVSAHDEDTGRDGEVRYSIRDGSGVGVFRIDEETGVVETAERLDRESTPHYWLT 1107
Query: 173 VF 174
V+
Sbjct: 1108 VY 1109
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 11/101 (10%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR--------VHATDADEG 131
GLSS TV + + D ND P F Y + E +V + ATDAD
Sbjct: 1742 AGLSSNTTVVVHLQDENDNLPVFTQAEYTGLISESASINSVVLTDKNVPLVIRATDADRE 1801
Query: 132 QNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
NA++ Y + E F +D++TG I T +LDYE+ + +
Sbjct: 1802 SNALLVYHIVEPSLHKYFAIDSSTGAIHTVLSLDYEETRTF 1842
Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 73/174 (41%), Gaps = 26/174 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
+L Y A+ + +G + V A D+DSG+ G V Y L +++ +F + A E
Sbjct: 2082 NLPYYAVVKVDTVVGHVIRYVTAVDRDSGRNGEVHYYLKEHH----EHFQIGSAGEISLK 2137
Query: 76 IQ-----------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
Q D G + +A V + +T +N P F+ Y VPE L
Sbjct: 2138 KQFESDTLNKEYLITVVAKDGGNPAFSAEVMVPITVMNKAMPVFEKPFYSAEVPENVQ-L 2196
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
VH AD + V+YS+ + P F V+ NTG I LD+E Y
Sbjct: 2197 HSPVVH-IQADSPEGFKVFYSITDGDPFSQFTVNFNTGVISVIAPLDFESHPAY 2249
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 32/172 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ----------- 77
+G ++M V A D+D+G+ G V Y + D + F +D E G ++
Sbjct: 1048 VGFSIMTVSAHDEDTGRDGEVRYSIRDGS--GVGVFRID---EETGVVETAERLDRESTP 1102
Query: 78 ---------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHA 125
D G LSS + I V D+ND P+ Y + E ++V + A
Sbjct: 1103 HYWLTVYATDRGVVPLSSFVEIYIEVEDVNDNAPQTSEPVYYPEIIENSPKDVSVVHIEA 1162
Query: 126 TDADEGQNAVVYYSVPEDIP---FVVDANTGDI-RTNKALDYEKQQLYLERV 173
D D N + Y + P F V TG I T++ LD E+Q ++ V
Sbjct: 1163 FDPDSSSNDKLMYKITSGNPQGFFSVHPKTGLITTTSRKLDREQQDEHILEV 1214
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFS--VPEGQDGLAVGRVHATDADEGQNAVVYYSVPE 142
A V IRV DIND P F YE S +P + G+ V V+ATDAD + V YS+ E
Sbjct: 1862 ANVTIRVIDINDCPPVFSKSLYEASLLLPTYR-GVKVITVNATDADSSAFSQVMYSITE 1919
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVY 137
+G + V I+V D ND P+F + YE +PE + ++ A D DE +N ++Y
Sbjct: 1432 DGTTAVLTQVFIKVIDTNDHRPQFSASKYEVVIPEDTVPETEILQISAVDKDE-KNKLIY 1490
Query: 138 YSVPEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERVFL 175
P F +D TG + T++ LD+E ++ V +
Sbjct: 1491 TLQGSVDPLSVRKFRLDPATGSLFTSETLDHEAVHQHILTVMV 1533
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 34/178 (19%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-- 70
TS+ ++Y + + + V+++ ++A D DS + Y++ N +F++ P T
Sbjct: 1138 TSEPVYYPEIIENSPK-DVSVVHIEAFDPDSSSNDKLMYKITSGNPQG--FFSVHPKTGL 1194
Query: 71 --------------EH--QGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH + + D G S+ A V +++ D ND P+F Y+ +P
Sbjct: 1195 ITTTSRKLDREQQDEHILEVTVTDNGIPPKSTIARVIVKILDENDNKPQFLQKFYKIRLP 1254
Query: 113 EGQDGLA--------VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNK 159
E + + RV ATD DEG NA + YS+ E F ++ TG + + K
Sbjct: 1255 ERERPERERNAKREPLYRVIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTGVVSSKK 1312
Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 89 NIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV-----PE 142
+I V DIND P F Y ++ E G +V +V ATD+D N + Y +
Sbjct: 2269 DIIVEDINDSPPVFVHQSYATTLSEASVIGTSVVQVRATDSDSEPNRGISYHMFGNHSKS 2328
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
F +D++TG I + LDYE+ Q + ++F+
Sbjct: 2329 HDHFHIDSSTGLISLVRTLDYEQFQQH--KIFV 2359
Score = 35.4 bits (80), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 39/189 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y A+ + L +++ V A D D + Y ++D N S F +DP +G ++
Sbjct: 3339 YTAVVSEDALLEQSVITVMADDADGPSNSHIRYSIIDGN--QGSPFTVDPT---RGEVKV 3393
Query: 78 ----DEGGLS-----------------STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
D +S +T TVNI V+D+ND P F Y + E +
Sbjct: 3394 TKLLDRETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSKGNYSVIIQENKP 3453
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
G +V ++ +D D N PF +G+ ++A + +Q + L +
Sbjct: 3454 VGFSVLQLVVSDKDSSHNGP---------PFFFSVVSGN--DDRAFEVNQQGVLLTSAAI 3502
Query: 176 ISKFATSYL 184
K YL
Sbjct: 3503 KRKVKDHYL 3511
>gi|292628237|ref|XP_001920772.2| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Danio
rerio]
Length = 3006
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 22/156 (14%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNT-------------DAASYFNLDPATEHQGPIQDEGG- 81
VKATDKD+G V Y +++ N D S + + E+ ++ + G
Sbjct: 477 VKATDKDAGNNAKVHYSIINGNIKGQFYIHSPTGVIDVVSPLDYEMIREYTLRVKAQDGG 536
Query: 82 ----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVV 136
++ T V I+V D+ND P F S P++ SV E G +V + A DAD G NA +
Sbjct: 537 RPPLINGTGMVVIQVVDVNDNAPMFVSTPFQASVLENVPIGYSVIHIQAIDADSGDNAHL 596
Query: 137 YYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
Y + + PFV++ +TG + + LD E + Y
Sbjct: 597 EYKLTDTSPGFPFVINNSTGWVTVSAELDRETTEFY 632
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 80/180 (44%), Gaps = 26/180 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA--------- 69
Y R+ E+G +M ++ATD D+ + Y+++ N+ + S F +DP
Sbjct: 352 YRVNVRENVEVGFEVMTIRATDGDAPSNANMIYKIV-NDDEVNSCFEIDPRNGLVRTKVR 410
Query: 70 ------------TEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QD 116
E ++ G ++TATV+I + D ND P+F Y V E
Sbjct: 411 PDREVKSQYKLFVEANDQGREPGPRTATATVHIFIEDENDNYPQFSEKRYVVQVSENIAV 470
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
V V ATD D G NA V+YS+ +I F + + TG I LDYE + Y RV
Sbjct: 471 NTQVAVVKATDKDAGNNAKVHYSIINGNIKGQFYIHSPTGVIDVVSPLDYEMIREYTLRV 530
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 73/159 (45%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQGP 75
+G +++ V A D+D +V Y++ NT + LD E Q
Sbjct: 681 VGTSVLTVSAVDRDVNS--VVTYQISSGNTRNRFAISSQSGGGLITLALPLDYKQERQYL 738
Query: 76 IQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+ +G T V I VTD N P FQS Y+ V E + G V + ATD D G
Sbjct: 739 LTITASDGTRHDTTQVFINVTDANTHRPVFQSANYQVLVSEDRPVGSTVVVISATDEDTG 798
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + +++P F +D +TG I T +DYE Q Y
Sbjct: 799 ENARITYVMEDNVPQFRIDPDTGAITTQIEIDYEDQASY 837
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 30/165 (18%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ-------------- 77
+++QV A+D+DSG G + Y + +F ++P + G I+
Sbjct: 889 SVLQVSASDRDSGSNGRLSYTFQGGDDGEGDFF-IEP---YSGIIRTARKLDRENVALYT 944
Query: 78 ------DEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
D+G A V+I+V+ DIND P F+ V E G + RV ATD
Sbjct: 945 LKAFAVDKGVPPLKAAVDIQVSVLDINDNAPVFEKDELYIYVEENSAVGSTLARVSATDP 1004
Query: 129 DEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
DEG NA + Y + E + P F +D +GD+ LDYE + Y+
Sbjct: 1005 DEGTNAQILYQIVEGNFPEVFQLDIFSGDLIALTDLDYETKMEYV 1049
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 81/184 (44%), Gaps = 28/184 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + + +G T++ + ATD+D+G+ + Y + DN F +DP T
Sbjct: 773 YQVLVSEDRPVGSTVVVISATDEDTGENARITYVMEDN----VPQFRIDPDTGAITTQIE 828
Query: 71 ---EHQGP-----IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL- 118
E Q I + G+ S T V I V D ND P+F Y+ +V E
Sbjct: 829 IDYEDQASYTLAIIARDNGIPQKSDTTYVEIIVLDANDNVPQFLRDIYQGTVFEDAPVYT 888
Query: 119 AVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
+V +V A+D D G N + Y+ + F ++ +G IRT + LD E LY + F
Sbjct: 889 SVLQVSASDRDSGSNGRLSYTFQGGDDGEGDFFIEPYSGIIRTARKLDRENVALYTLKAF 948
Query: 175 LISK 178
+ K
Sbjct: 949 AVDK 952
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 72/167 (43%), Gaps = 29/167 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEY---RLLDNNTDAASYFNLDPATEHQGPIQ--------- 77
G ++ +KA D D G G+V Y L D+ ++ + F ++P T +Q
Sbjct: 255 GTRVITLKAFDADDGDAGVVVYDMEALFDSRSN--NLFQINPETGGITTLQPLDREVKDT 312
Query: 78 --------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
D+G S+ A + I V+D ND +P F+ Y +V E + G V + AT
Sbjct: 313 HVFKVTATDKGIPKRSAIAYLTITVSDTNDHSPVFEQNEYRVNVRENVEVGFEVMTIRAT 372
Query: 127 DADEGQNAVVYYSVPED----IPFVVDANTGDIRTNKALDYEKQQLY 169
D D NA + Y + D F +D G +RT D E + Y
Sbjct: 373 DGDAPSNANMIYKIVNDDEVNSCFEIDPRNGLVRTKVRPDREVKSQY 419
Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 25/165 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNN-------TDAASYFNLDPATEHQGP------ 75
+G +++ ++A D DSG +EY+L D + ++ + + + +
Sbjct: 576 IGYSVIHIQAIDADSGDNAHLEYKLTDTSPGFPFVINNSTGWVTVSAELDRETTEFYSFG 635
Query: 76 --IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE 130
+D G +SS+A+V++ + D+ND P F Y V E G +V V A D D
Sbjct: 636 VEARDHGVPTMSSSASVSVTILDVNDNVPTFTQHLYNLKVNEDAVVGTSVLTVSAVDRD- 694
Query: 131 GQNAVVYYSVPEDIP---FVVDANTGD--IRTNKALDYEKQQLYL 170
N+VV Y + F + + +G I LDY++++ YL
Sbjct: 695 -VNSVVTYQISSGNTRNRFAISSQSGGGLITLALPLDYKQERQYL 738
Score = 42.7 bits (99), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 28/169 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNN-----------TDAASYFNLDPATEHQGPI- 76
+G TL +V ATD D G + Y++++ N D + +LD T+ + I
Sbjct: 992 VGSTLARVSATDPDEGTNAQILYQIVEGNFPEVFQLDIFSGDLIALTDLDYETKMEYVIV 1051
Query: 77 --QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRVHA 125
L S ATV++ + D+ND +P Q F S P G +G+V A
Sbjct: 1052 VQATSAPLVSRATVHVLLVDVNDNDPVLQDFEIIFNNYITNKSSSFPNG----VIGKVPA 1107
Query: 126 TDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLERV 173
D D + + ++ +++ +TG+++ +K LD + L RV
Sbjct: 1108 RDPDVSDKLIYTFVEGNELGLLILNQDTGELKLSKDLDNNRPLEALMRV 1156
Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 100 PEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVP------EDIPFVVDANT 152
P+FQ Y+ SVPE + G V + A DAD+G VV Y + + F ++ T
Sbjct: 237 PQFQLPNYQVSVPENEPSGTRVITLKAFDADDGDAGVVVYDMEALFDSRSNNLFQINPET 296
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G I T + LD E + ++ +V
Sbjct: 297 GGITTLQPLDREVKDTHVFKV 317
>gi|148664769|gb|EDK97185.1| mCG140834 [Mus musculus]
Length = 796
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 19/147 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGG---LSSTATVN 89
+ V+ +D+ S LV + LD DA L + +GG L+ T +
Sbjct: 179 FLDVQTSDELSQSLFLVLGKSLDREEDAEVKLLL---------VATDGGKPELTGTVQIL 229
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP--- 145
I+V D+ND P F Y+ + E +G V +++A+DADEG N+ + YS+ D+
Sbjct: 230 IKVLDVNDNEPTFPQSVYKVQLLENTANGTLVMKLNASDADEGSNSEIVYSLGSDVSSTT 289
Query: 146 ---FVVDANTGDIRTNKALDYEKQQLY 169
F +D N+G++RT LDYE++ Y
Sbjct: 290 RTKFQIDPNSGEVRTKGELDYEERTSY 316
Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 28/167 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVE--------YRLLDNNTDAASYFNLDPATEHQGP----- 75
LG + + +D+DSG G V ++L+ + S LD A + +
Sbjct: 365 LGAVIALISVSDRDSGVNGQVTCSLSPHVPFKLVSTFKNYYSLV-LDSALDREATADYKV 423
Query: 76 --IQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
+GG L +TA+V++ V D+ND P F Y V E G + V A DAD
Sbjct: 424 MVTARDGGSPSLRATASVSVEVADVNDNAPVFAQPEYTVFVKENNPPGAHIFTVSAMDAD 483
Query: 130 EGQNAVVYYSVPED-------IPFV-VDANTGDIRTNKALDYEKQQL 168
+NA+V YS+ E +V V A +G + + LD+E+ +L
Sbjct: 484 AQENALVSYSLVERRVGERLLSSYVSVHAESGKVFALQPLDHEELEL 530
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 60/141 (42%), Gaps = 27/141 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLDPAT-----------------E 71
G +M++ A+D D G + Y L D ++ + F +DP + E
Sbjct: 258 GTLVMKLNASDADEGSNSEIVYSLGSDVSSTTRTKFQIDPNSGEVRTKGELDYEERTSYE 317
Query: 72 HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQ----SLPYEFSVPEGQDGLAVGRVHA 125
Q D+G +S +++++ DIND PE SLP + + P G + +
Sbjct: 318 IQVIASDKGTPAMSGHCKISVKLVDINDNTPEVSITSLSLPVQENAPLGA---VIALISV 374
Query: 126 TDADEGQNAVVYYSVPEDIPF 146
+D D G N V S+ +PF
Sbjct: 375 SDRDSGVNGQVTCSLSPHVPF 395
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 70/186 (37%), Gaps = 50/186 (26%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------------NTDAASYFN 65
Y ++ + G + V A D D+ + LV Y L++ + ++ F
Sbjct: 460 YTVFVKENNPPGAHIFTVSAMDADAQENALVSYSLVERRVGERLLSSYVSVHAESGKVFA 519
Query: 66 LDPA-------TEHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
L P + Q +D G L S T+ + V D ND P +P+G
Sbjct: 520 LQPLDHEELELLQFQVTARDAGVPALGSNVTLQVFVLDENDNAP--------LLLPQGAV 571
Query: 117 GLA----------------VGRVHATDADEGQNAVVYYSVPEDIP----FVVDANTGDIR 156
G+ V +V A DAD G NA + Y + + F V TG+I
Sbjct: 572 GVGGSVSELVPRSVGSGHVVTKVRAVDADSGYNAWLSYELQSTVGMRSLFRVGLYTGEIS 631
Query: 157 TNKALD 162
T +ALD
Sbjct: 632 TTRALD 637
>gi|187957174|gb|AAI57928.1| Cadherin 19, type 2 [Mus musculus]
Length = 770
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 29/179 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------E 71
Y A+ + G +++V A D D G R+L N YF+++P T +
Sbjct: 151 YEAIVPEMSPEGTFVIKVTANDADDPSTGY-HARILYNLERGQPYFSVEPTTGVIRISSK 209
Query: 72 HQGPIQDE--------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD- 116
+QD G LS T TV+I+++DIND P F+ Y F++ E
Sbjct: 210 MDRELQDTYCVIIQAKDMLGQPGALSGTTTVSIKLSDINDNKPIFKESFYRFTISESAPI 269
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPED----IPFVVDANT--GDIRTNKALDYEKQQLY 169
G ++G++ A D D G+NA + YS+ +D ++D +T G + K +D+E+Q Y
Sbjct: 270 GTSIGKIMAYDDDIGENAEMEYSIEDDDSKIFDIIIDNDTQEGIVILKKKVDFEQQSYY 328
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
IRV DIND P F PYE VPE +G V +V A DAD+ G +A + Y++ P
Sbjct: 134 IRVLDINDNEPRFLDEPYEAIVPEMSPEGTFVIKVTANDADDPSTGYHARILYNLERGQP 193
Query: 146 -FVVDANTGDIRTNKALDYEKQQLYL 170
F V+ TG IR + +D E Q Y
Sbjct: 194 YFSVEPTTGVIRISSKMDRELQDTYC 219
Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
+ST + ++V D D+ P F Y +PEG+ G VG V ATD D Q+ + YY
Sbjct: 350 ASTTYIKVQVED-EDEPPVFLLPYYILEIPEGKPYGTIVGTVSATDPDRRQSPMRYYLTG 408
Query: 142 EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ F ++ N G I T LD E Y
Sbjct: 409 SKM-FDINDN-GTIITTNMLDREVSAWY 434
>gi|355749714|gb|EHH54113.1| hypothetical protein EGM_14874 [Macaca fascicularis]
Length = 4591
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 68/132 (51%), Gaps = 17/132 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI-- 76
L +M+VK TD DSG +G V Y ++++ Y N LD T + I
Sbjct: 2510 LHTLVMEVKTTDGDSGIYGDVTYHIVNDFAKDRFYINERGQILTLEKLDRETPAEKVISV 2569
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEG 131
+D GG + TVN+ +TD ND P+F++ YE ++ G +V +V A+DADEG
Sbjct: 2570 RLMAKDAGGKVAFCTVNVILTDDNDNAPQFRATKYEVNIGSSAAKGTSVIKVLASDADEG 2629
Query: 132 QNAVVYYSVPED 143
NA V Y++ D
Sbjct: 2630 SNADVTYAIEAD 2641
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 75/160 (46%), Gaps = 23/160 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI---------- 76
G +MQ+ A D D + Y LL + A F L+P T + P+
Sbjct: 3042 GKLIMQISAADADIRSNAEITYTLLGS---GAEKFQLNPDTGELKTSAPLDREEQAVYHL 3098
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D GG A++ + + D+ND PEF + PY +V E + G + RV ATDAD G
Sbjct: 3099 LVRATDRGGRFCQASIVLALEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDADSG 3158
Query: 132 QNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
N + YS+ + D F ++ +G I+ K LD E Q +Y
Sbjct: 3159 LNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVY 3198
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 29/176 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
++ ++ DK E+ ++QV+ATDKD G G V Y +L +TD F++D AT
Sbjct: 827 YFVEVSEDK-EVHSEIIQVEATDKDLGPNGHVTYSIL-TDTDK---FSIDSATGVVKITH 881
Query: 71 --------EHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
EH I+ +E L ST + + + D+ND P+F Y V E
Sbjct: 882 PLDRELQHEHYLKIEARDQAREEPQLFSTVVLKVSLEDVNDNPPKFIPPNYRVKVREDLP 941
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
+G + + A D D GQ+ V YS+ + + F VD +G +R + LD+EK+Q+Y
Sbjct: 942 EGTVIMWLEAHDPDLGQSGQVRYSLMDHGEGNFDVDKLSGAVRIVQQLDFEKKQVY 997
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 7/104 (6%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAV 135
QD+ + ++ V+I+V D ND +P F+S PYE F V G V ++ A+DAD G N+
Sbjct: 2787 QDDREMVASVDVSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNSQ 2846
Query: 136 VYYSVPEDI------PFVVDANTGDIRTNKALDYEKQQLYLERV 173
V YS+ + F ++ TG I T K LD+E++ Y +V
Sbjct: 2847 VMYSLDQSQSVEVIESFAINMETGWITTLKELDHEERDNYQIKV 2890
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 25/169 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--------TDAASYF---NLD 67
YGA + +G ++QV A +D + Y ++ N + + F NLD
Sbjct: 3238 YGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLD 3297
Query: 68 PATEHQGPIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--- 118
+ H+ + E GG LS ATVN+ VTD+ND P F Y V E D +
Sbjct: 3298 YESSHEYYLTIEATDGGTPSLSDVATVNVNVTDVNDNAPVFSQDTYTAVVSE--DAVLEQ 3355
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
+V V A DAD N+ ++YS+ + PF +D G+++ K LD E
Sbjct: 3356 SVITVLADDADGPSNSHIHYSIIDGNQGGPFTIDPVRGEVKVTKLLDRE 3404
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 75/172 (43%), Gaps = 21/172 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + E G L +V+ATD DSG + Y L+D+ S L + + P+
Sbjct: 3133 YAITVFENTEPGTLLTRVQATDADSGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDR 3192
Query: 78 -------------DEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAV 120
D+G L++T TV + V DIND P F+ Y +V E G V
Sbjct: 3193 ELQAVYTLSLKAVDQGLPRRLTATGTVVVSVLDINDNPPVFEYREYGATVSEDILVGTEV 3252
Query: 121 GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V+A D NA + YS+ E F +D+ TG + + LDYE Y
Sbjct: 3253 LQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEY 3304
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 2/144 (1%)
Query: 37 KATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIN 96
KA + G F + R NT + D T ++ + + V ++V D N
Sbjct: 84 KAEEYVLGDFCFLRIRTKGGNTAILNREVKDHYTLIVKAVEKNTNMEARTKVRVQVLDTN 143
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGD 154
D P F Y S+PE ++ RV ATDAD G N YYS + F + +G
Sbjct: 144 DLRPLFSPTSYSVSLPENTAIRTSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGV 203
Query: 155 IRTNKALDYEKQQLYLERVFLISK 178
I LDY + +LY + + +
Sbjct: 204 IVLTGRLDYLETKLYEMEILAVDR 227
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 23/160 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV+ATD DS + Y+L N + + +F++D +T
Sbjct: 2291 YAATLSEASVIGTSVVQVRATDADSEPNRGISYQLSGNLSKSHDHFHVDSSTGLISLLRT 2350
Query: 71 -------EHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
H ++ +GG LSS V + VTD+ND P F+ YE + E G
Sbjct: 2351 LDYEQSQRHTIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPHGH 2410
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
V V A DAD + YS+ + F++D+ TG I
Sbjct: 2411 FVTCVKAYDADSSDIDKLQYSILSGNDHKHFIIDSATGII 2450
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE 142
++ V ++V N PEF Y+ + E G V + A D DEG+N V YS+
Sbjct: 445 ASTKVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYSITN 504
Query: 143 --DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSY 183
+PFV+D TG + T++ LDYE + RV+ + A+ +
Sbjct: 505 LNHVPFVIDHFTGAVSTSENLDYE----LMPRVYTLRIRASDW 543
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVY 137
+G SS A V ++V D ND +P + Y ++PE G + ++ A DAD NA +
Sbjct: 3003 DGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPEDVLPGKLIMQISAADADIRSNAEIT 3062
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ F ++ +TG+++T+ LD E+Q +Y
Sbjct: 3063 YTLLGSGAEKFQLNPDTGELKTSAPLDREEQAVY 3096
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI 144
A + + V+D ND P F + Y+ V E G V +V A D D+G+NA V YS+ I
Sbjct: 1546 ARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSIESGI 1605
Query: 145 ------PFVVDANTGDIRTNKALDYEKQQLY 169
F++D G I+T K LD Q Y
Sbjct: 1606 FGNIGNSFMIDPVLGSIKTAKELDRSNQVEY 1636
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 19/173 (10%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQGPIQD 78
G ++ +G +++ + +TD D+G G + Y + N D+ +++ + P+
Sbjct: 723 GIQVKENQPVGSSVIFMNSTDLDTGFNGKLVYAISGGNEDSCFMIDMETGMLKILSPLDR 782
Query: 79 EG-------------GLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VG 121
E G+ A +++ V D ND PEF Y V E ++ + +
Sbjct: 783 ETTDKYTLNITVYDLGIPQKAAWRLLDVVVVDANDNPPEFLQESYFVEVSEDKEVHSEII 842
Query: 122 RVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYLERV 173
+V ATD D G N V YS+ D F +D+ TG ++ LD E Q + ++
Sbjct: 843 QVEATDKDLGPNGHVTYSILTDTDKFSIDSATGVVKITHPLDRELQHEHYLKI 895
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G + V+I V DIND P F Y ++ E G +V +V ATDAD N + Y
Sbjct: 2265 GAHAEVFVDIIVEDINDNAPVFAQQSYAATLSEASVIGTSVVQVRATDADSEPNRGISYQ 2324
Query: 140 VPEDIP-----FVVDANTGDIRTNKALDYEKQQLY 169
+ ++ F VD++TG I + LDYE+ Q +
Sbjct: 2325 LSGNLSKSHDHFHVDSSTGLISLLRTLDYEQSQRH 2359
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 11/101 (10%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR--------VHATDADEG 131
GLS+ TV++++ D ND +P F Y + E +V + A DAD+
Sbjct: 1746 AGLSTNTTVSVQLQDENDNSPVFMQAEYTGLISESASINSVVLTDRNVPLVIRAADADKD 1805
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
NA++ Y + E F +D++TG I T +LDYE+ +
Sbjct: 1806 SNALLVYHIVEPSVHKYFAIDSSTGAIHTVLSLDYEETSTF 1846
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 74/178 (41%), Gaps = 34/178 (19%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
+L Y A+ + E+G + V A D+DSG+ G V Y L +++ YF + P E
Sbjct: 2086 NLPYYAVVKVDTEVGRVIRHVTAVDRDSGRNGEVHYYLKEHH----EYFQIGPLGEISLK 2141
Query: 76 IQ-----------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
Q D G + +A V + +T +N P F+ Y + E
Sbjct: 2142 KQFEPDTLNKEYLVTVVAKDGGNPAFSAEVMVPITVMNKAMPVFEKPFYSAEIAENV--- 2198
Query: 119 AVGRVHA----TDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+VH+ A+ + V+YS+ + P F ++ NTG I LD+E Y
Sbjct: 2199 ---QVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAPLDFEAHPAY 2253
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 74/173 (42%), Gaps = 36/173 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLD--------------------- 67
G ++Q++A+D DSG V Y L + + F ++
Sbjct: 2828 GSRVIQIRASDADSGTNSQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEERDNYQ 2887
Query: 68 ---PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRV 123
A++H IQ LSSTA V++ VTD+ND P F + Y+ +V E G + +
Sbjct: 2888 IKVVASDHGEKIQ----LSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSEDDPPGGVIAIL 2943
Query: 124 HATDAD-EGQNAVVYYSVPEDIP---FVVD--ANTGDIRTNKALDYEKQQLYL 170
TDAD E N V Y + P F V+ N + K LD EK+ YL
Sbjct: 2944 STTDADSEEINRQVTYFITGGDPLGQFAVENIQNEWKVYVKKPLDREKRDNYL 2996
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 34/178 (19%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-- 70
TS+ ++Y + + + V+++Q++A D D + YR+ N +F + P T
Sbjct: 1139 TSEPVYYPEILENSPK-DVSVVQIEAFDPDLSSNDKLVYRITSGNPQG--FFAVHPKTGL 1195
Query: 71 --------------EH--QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH + + D G S+ A V +++ D ND P+F Y+ +P
Sbjct: 1196 ITTTSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLP 1255
Query: 113 EGQD--------GLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNK 159
E + + RV ATD DEG NA + YS+ E F ++ TG + + K
Sbjct: 1256 EREKPDRERNARREPLYRVIATDKDEGPNAEISYSIEEGNEHGKFFIEPKTGVVSSKK 1313
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 31/180 (17%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN---------------------NT 58
GA+ D +G +M V A D+D+G+ G + Y + D +
Sbjct: 1041 GAVKEDA-PVGSLVMTVSAHDEDAGRDGEIRYSIRDGSGVGVFKIGEETGIIETSDRLDR 1099
Query: 59 DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DG 117
++ S++ L QG + LSS + I V D+ND P+ Y + E
Sbjct: 1100 ESTSHYWLTVFATDQGVVP----LSSFIEIYIEVEDVNDNAPQTSEPVYYPEILENSPKD 1155
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDI-RTNKALDYEKQQLYLERV 173
++V ++ A D D N + Y + P F V TG I T++ LD E+Q ++ V
Sbjct: 1156 VSVVQIEAFDPDLSSNDKLVYRITSGNPQGFFAVHPKTGLITTTSRKLDREQQDEHILEV 1215
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 69/175 (39%), Gaps = 39/175 (22%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y A+ + L +++ V A D D + Y ++D N F +DP +G ++
Sbjct: 3343 YTAVVSEDAVLEQSVITVLADDADGPSNSHIHYSIIDGNQGGP--FTIDPV---RGEVKV 3397
Query: 78 ----DEGGLS-----------------STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
D +S +T TVNI V+D+ND P F Y + E +
Sbjct: 3398 TKLLDRETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQENKP 3457
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
G +V R+ TD D N PFV TG+ KA + +Q + L
Sbjct: 3458 VGFSVLRLVVTDEDSSHNGP---------PFVFTIVTGN--DEKAFEVNQQGVLL 3501
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 74/177 (41%), Gaps = 33/177 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN-TDAASYFNLDPATEHQGPIQ 77
Y + +G ++QV A DKD GK V Y + + + F +DP G I+
Sbjct: 1567 YKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSIESGIFGNIGNSFMIDPVL---GSIK 1623
Query: 78 --------------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
D+G +S +V+I VT ++ P+F S Y + E
Sbjct: 1624 TAKELDRSNQVEYDLIVKATDKGSPPMSEVTSVHIFVTVADNAPPKFTSKDYSVEISETV 1683
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
G VG V A Q++VVY + F ++ ++G I T KALD+E +Y
Sbjct: 1684 SIGSFVGMVTA----HSQSSVVYEIKDGNTGDAFDINPHSGSIITQKALDFETLPVY 1736
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVY 137
+G + V I+V D ND P+F + YE +PE + + A D DE +N ++Y
Sbjct: 1433 DGTTTILTQVFIKVIDTNDHRPQFSTSKYEVVIPEDTVPETEILHISAVDQDE-KNRLIY 1491
Query: 138 YSVPEDIP-----FVVDANTGDIRTNKALDYE 164
P F +D TG + T++ LD+E
Sbjct: 1492 TLQGSRDPLSLKKFRLDPATGSLYTSEKLDHE 1523
Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 27/137 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYF-NLD- 67
Y A + +G T+M + A D D G+ G V Y + +D+ T A S NLD
Sbjct: 468 YKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYSITNLNHVPFVIDHFTGAVSTSENLDY 527
Query: 68 -----------PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
A++ P + E + +T T+N ++ND P F+ + E ++P
Sbjct: 528 ELMPRVYTLRIRASDWGLPYRREAEVLATITLN----NLNDNTPLFEKINCEGTIPRDLG 583
Query: 117 -GLAVGRVHATDADEGQ 132
G + V A DADE Q
Sbjct: 584 VGEQITTVSAIDADELQ 600
>gi|345328407|ref|XP_001512164.2| PREDICTED: protocadherin-11 X-linked-like [Ornithorhynchus
anatinus]
Length = 1088
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 74/165 (44%), Gaps = 24/165 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G L ++ ATD D G+ + Y L +DA FNLD T E Q
Sbjct: 470 GTQLTKISATDADGGRNAEISYML---GSDAPPIFNLDRRTGVLTAVRRLDREKQDRYSF 526
Query: 76 ---IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
+D G L + ATV + V D ND +P F Y F VPE VG + TDAD
Sbjct: 527 TVLARDNGIPPLQANATVTVSVLDQNDNSPAFTHNEYNFYVPENLPMYGTVGLITVTDAD 586
Query: 130 EGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYLERV 173
G+NA V S+ F++D TG IR N D E+Q Y +V
Sbjct: 587 AGENAAVTLSILNGRDHFIIDPLTGVIRPNITFDREQQGSYTFQV 631
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
SSTA + + VTD+ND P F+ E S+PE G +V ++HATDAD G NA + +S
Sbjct: 218 SSTAILQVTVTDVNDNRPVFKENDIEVSIPENAPVGTSVSQLHATDADLGANAQIRFSFS 277
Query: 142 EDIP------FVVDANTGDIRTNKALDYEK 165
I F +D TG I T LD E+
Sbjct: 278 NQISSLAKRLFAIDNATGLITTKDVLDREE 307
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 78/169 (46%), Gaps = 20/169 (11%)
Query: 21 AMARDKHELGVTLMQVKATDKDS---GKFGL-----VEYRL---LDNN--TDAASYFNLD 67
+ +K + + + TDKD+ GK V +RL DN + A+Y + +
Sbjct: 356 VLLSEKAPINTKIALITVTDKDADLNGKVTCFTDHDVPFRLKPVFDNQFLLETATYLDYE 415
Query: 68 PATEHQGPI--QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
E+ I D G L+ +A + I++ D ND P F S+PE G + +
Sbjct: 416 ATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPVIGLSIPENNAPGTQLTK 475
Query: 123 VHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+ ATDAD G+NA + Y + D P F +D TG + + LD EKQ Y
Sbjct: 476 ISATDADGGRNAEISYMLGSDAPPIFNLDRRTGVLTAVRRLDREKQDRY 524
Score = 42.7 bits (99), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 55/132 (41%), Gaps = 27/132 (20%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ--- 77
T+ + TD D+G+ V +L+ +F +DP T E QG
Sbjct: 576 TVGLITVTDADAGENAAVTLSILN----GRDHFIIDPLTGVIRPNITFDREQQGSYTFQV 631
Query: 78 ---DEGGL--SSTATVNIRVTDINDKNPEF----QSLPYEFSVPEGQDGLAVGRVHATDA 128
D G L SSTA V I V D+ND P F + Y+ G V +V A D
Sbjct: 632 KAVDAGRLQRSSTAKVTINVVDVNDNRPVFVVPSSNYSYDLVPTTAGPGSVVTKVFAVDN 691
Query: 129 DEGQNAVVYYSV 140
D G NA + YS+
Sbjct: 692 DTGMNAELRYSI 703
>gi|380790103|gb|AFE66927.1| protocadherin Fat 1 precursor [Macaca mulatta]
Length = 4588
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 68/132 (51%), Gaps = 17/132 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI-- 76
L +M+VK TD DSG +G V Y ++++ Y N LD T + I
Sbjct: 2507 LHTLVMEVKTTDGDSGIYGDVTYHIVNDFAKDRFYINERGQIFTLEKLDRETPAEKVISV 2566
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEG 131
+D GG + TVN+ +TD ND P+F++ YE ++ G +V +V A+DADEG
Sbjct: 2567 RLMAKDAGGKVAFCTVNVILTDDNDNAPQFRATKYEVNIGSSAAKGTSVIKVLASDADEG 2626
Query: 132 QNAVVYYSVPED 143
NA V Y++ D
Sbjct: 2627 SNADVTYAIEAD 2638
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 74/160 (46%), Gaps = 23/160 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI---------- 76
G +MQ+ A D D + Y L + A F L+P T + P+
Sbjct: 3039 GKLIMQISAADADIRSNAEITYTL---SGSGAEKFQLNPDTGELKTSAPLDREEQAVYHL 3095
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D GG A++ + + D+ND PEF + PY +V E + G + RV ATDAD G
Sbjct: 3096 LVRATDRGGRFCQASIVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDADSG 3155
Query: 132 QNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
N + YS+ + D F ++ +G I+ K LD E Q +Y
Sbjct: 3156 LNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVY 3195
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 87/176 (49%), Gaps = 29/176 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
++ ++ DK E+ ++QV+ATDKD G G V Y +L +TD F++D AT
Sbjct: 827 YFVEVSEDK-EVHSEIIQVEATDKDLGPNGHVTYSIL-TDTDK---FSIDSATGVVKIMH 881
Query: 71 --------EHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
EH I+ +E L ST + + + D+ND P+F Y V E
Sbjct: 882 PLDRELQHEHYLKIEARDQAREEPQLFSTVVLKVSLEDVNDNPPKFIPPNYRVKVREDLP 941
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
+G + + A D D Q+ V YS+ + + F VD +G +R + LD+EK+Q+Y
Sbjct: 942 EGTVIMWLEAHDPDLAQSGQVRYSLMDHGEGNFDVDKLSGAVRIVQQLDFEKKQVY 997
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 7/104 (6%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAV 135
QD+ + ++ V+I+V D ND +P F+S PYE F V G V ++ A+DAD G N+
Sbjct: 2784 QDDREMVASVDVSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNSQ 2843
Query: 136 VYYSVPEDI------PFVVDANTGDIRTNKALDYEKQQLYLERV 173
V YS+ + F ++ TG I T K LD+E++ Y +V
Sbjct: 2844 VMYSLDQSQSVEVIESFAINMETGWITTLKELDHEERDNYQIKV 2887
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 25/169 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--------TDAASYF---NLD 67
YGA + +G ++QV A +D + Y ++ N + + F NLD
Sbjct: 3235 YGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLD 3294
Query: 68 PATEHQGPIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--- 118
+ H+ + E GG LS ATVN+ VTD+ND P F Y V E D +
Sbjct: 3295 YESSHEYYLTIEATDGGTPSLSDVATVNVNVTDVNDNAPVFSQDTYTAVVSE--DAVLEQ 3352
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
+V V A DAD N+ ++YS+ + PF +D G+++ K LD E
Sbjct: 3353 SVITVLADDADGPSNSHIHYSIIDGNQGGPFTIDPVRGEVKVTKLLDRE 3401
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 75/172 (43%), Gaps = 21/172 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + E G L +V+ATD DSG + Y L+D+ S L + + P+
Sbjct: 3130 YAITVFENTEPGTLLTRVQATDADSGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDR 3189
Query: 78 -------------DEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAV 120
D+G L++T TV + V DIND P F+ Y +V E G V
Sbjct: 3190 ELQAVYTLSLKAVDQGLPRRLTATGTVVVSVLDINDNPPVFEYREYGATVSEDILVGTEV 3249
Query: 121 GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V+A D NA + YS+ E F +D+ TG + + LDYE Y
Sbjct: 3250 LQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEY 3301
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 2/144 (1%)
Query: 37 KATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIN 96
KA + G F + R NT + D T ++ + + V ++V D N
Sbjct: 84 KAEEYVLGDFCFLRIRTKGGNTAILNREVKDHYTLIVKAVEKNTNMEARTKVRVQVLDTN 143
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGD 154
D P F Y S+PE ++ RV ATDAD G N YYS + F + +G
Sbjct: 144 DLRPLFSPTSYSVSLPENTAIRTSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGV 203
Query: 155 IRTNKALDYEKQQLYLERVFLISK 178
I LDY + +LY + + +
Sbjct: 204 IVLTGRLDYLETKLYEMEILAVDR 227
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 23/160 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV+ATD DS + Y+L N + + +F++D +T
Sbjct: 2288 YAATLSEASVIGTSVVQVRATDSDSEPNRGISYQLSGNLSKSHDHFHVDSSTGLISLLRT 2347
Query: 71 -------EHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
H ++ +GG LSS V + VTD+ND P F+ YE + E G
Sbjct: 2348 LDYEQSQRHTIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPHGH 2407
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
V V A DAD + YS+ + F++D+ TG I
Sbjct: 2408 FVTCVKAYDADSSDIDKLQYSILSGNDHKHFIIDSATGII 2447
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE 142
++ V ++V N PEF Y+ + E G V + A D DEG+N V YS+
Sbjct: 445 ASTKVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYSITN 504
Query: 143 --DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSY 183
+PFV+D TG + T++ LDYE + RV+ + A+ +
Sbjct: 505 LNHVPFVIDHFTGAVSTSENLDYE----LMPRVYTLRIRASDW 543
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVY 137
+G SS A V ++V D ND +P + Y ++PE G + ++ A DAD NA +
Sbjct: 3000 DGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPEDVLPGKLIMQISAADADIRSNAEIT 3059
Query: 138 YSVPED--IPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ F ++ +TG+++T+ LD E+Q +Y
Sbjct: 3060 YTLSGSGAEKFQLNPDTGELKTSAPLDREEQAVY 3093
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 19/173 (10%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQGPIQD 78
G ++ +G +++ + +TD D+G G + Y + N D+ +++ + P+
Sbjct: 723 GIQVKENQPVGSSVIFMNSTDLDTGFNGKLVYAISGGNEDSCFMIDMETGMLKILSPLDR 782
Query: 79 EG-------------GLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VG 121
E G+ A +++ V D ND PEF Y V E ++ + +
Sbjct: 783 ETTDKYTLNITVYDLGIPQKAAWRLLDVVVVDANDNPPEFLQESYFVEVSEDKEVHSEII 842
Query: 122 RVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYLERV 173
+V ATD D G N V YS+ D F +D+ TG ++ LD E Q + ++
Sbjct: 843 QVEATDKDLGPNGHVTYSILTDTDKFSIDSATGVVKIMHPLDRELQHEHYLKI 895
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 11/101 (10%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR--------VHATDADEG 131
GLS+ TV++++ D ND +P F Y + E +V + A DAD+
Sbjct: 1743 AGLSTNTTVSVQLQDENDNSPVFMQAEYTGLISESASINSVVLTDRNVPLVIRAADADKD 1802
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
NA++ Y + E F +D++TG I T +LDYE+ +
Sbjct: 1803 SNALLVYHIVEPSVHKYFAIDSSTGAIHTVLSLDYEETSTF 1843
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G + V+I V DIND P F Y ++ E G +V +V ATD+D N + Y
Sbjct: 2262 GAHAEVFVDIIVEDINDNAPVFAQQSYAATLSEASVIGTSVVQVRATDSDSEPNRGISYQ 2321
Query: 140 VPEDIP-----FVVDANTGDIRTNKALDYEKQQLY 169
+ ++ F VD++TG I + LDYE+ Q +
Sbjct: 2322 LSGNLSKSHDHFHVDSSTGLISLLRTLDYEQSQRH 2356
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE-- 142
A + + V+D ND P F + Y+ V E G V +V A D D+G+NA V YS+
Sbjct: 1546 ARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSIESGN 1605
Query: 143 -DIPFVVDANTGDIRTNKALDYEKQQLY 169
F++D G I+T K LD Q Y
Sbjct: 1606 IGNSFMIDPVLGSIKTAKELDRSNQVEY 1633
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 74/173 (42%), Gaps = 36/173 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLD--------------------- 67
G ++Q++A+D DSG V Y L + + F ++
Sbjct: 2825 GSRVIQIRASDADSGTNSQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEERDNYQ 2884
Query: 68 ---PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRV 123
A++H IQ LSSTA V++ VTD+ND P F + Y+ +V E G + +
Sbjct: 2885 IKVVASDHGEKIQ----LSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSEDDPPGGVIAIL 2940
Query: 124 HATDAD-EGQNAVVYYSVPEDIP---FVVD--ANTGDIRTNKALDYEKQQLYL 170
TDAD E N V Y + P F V+ N + K LD EK+ YL
Sbjct: 2941 STTDADSEEINRQVTYFITGGDPLGQFAVENIQNEWKVYVKKPLDREKRDNYL 2993
Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 74/178 (41%), Gaps = 34/178 (19%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
+L Y A+ + E+G + V A D+DSG+ G V Y L +++ YF + P E
Sbjct: 2083 NLPYYAVVKVDTEVGRVIRHVTAVDRDSGRNGDVHYYLKEHH----EYFQIGPLGEISLK 2138
Query: 76 IQ-----------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
Q D G + +A V + +T +N P F+ Y + E
Sbjct: 2139 KQFELDTLNKEYLVTVVAKDGGNPAFSAEVMVPITVMNKAMPVFEKPFYSAEIAENV--- 2195
Query: 119 AVGRVHA----TDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+VH+ A+ + V+YS+ + P F ++ NTG I LD+E Y
Sbjct: 2196 ---QVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAPLDFEAHPAY 2250
Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 34/178 (19%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-- 70
TS+ ++Y + + + V+++Q++A D D + YR+ N +F + P T
Sbjct: 1139 TSEPVYYPEILENSPK-DVSVVQIEAFDPDLSSNDKLVYRITSGNPQG--FFAVHPKTGL 1195
Query: 71 --------------EH--QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH + + D G S+ A V +++ D ND P+F Y+ +P
Sbjct: 1196 ITTTSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLP 1255
Query: 113 EGQD--------GLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNK 159
E + + RV ATD DEG NA + YS+ E F ++ TG + + K
Sbjct: 1256 EREKPDRERNARREPLYRVIATDKDEGPNAEISYSIEEGNEHGKFFIEPKTGVVSSKK 1313
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 74/176 (42%), Gaps = 34/176 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + +G ++QV A DKD GK V Y + N + F +DP G I+
Sbjct: 1567 YKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSIESGNI--GNSFMIDPVL---GSIKT 1621
Query: 78 -------------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
D+G +S +V+I VT ++ P+F S Y + E
Sbjct: 1622 AKELDRSNQVEYDLIVKATDKGSPPMSEVTSVHIFVTVADNAPPKFTSKDYSVEISETVS 1681
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
G VG V A Q++VVY + F ++ ++G I T KALD+E +Y
Sbjct: 1682 IGSFVGMVTA----HSQSSVVYEIKDGNTGDAFDINPHSGSIITQKALDFETLPVY 1733
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 31/180 (17%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN---------------------NT 58
GA+ D +G +M V A D+D+G+ G + Y + D +
Sbjct: 1041 GAVKEDT-PVGSLVMTVSAHDEDAGRDGEIRYSIRDGSGVGVFKIGEETGIIETSDRLDR 1099
Query: 59 DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DG 117
++ S++ L QG + LSS + I V D+ND P+ Y + E
Sbjct: 1100 ESTSHYWLTVFATDQGVVP----LSSFIEIYIEVEDVNDNAPQTSEPVYYPEILENSPKD 1155
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDI-RTNKALDYEKQQLYLERV 173
++V ++ A D D N + Y + P F V TG I T++ LD E+Q ++ V
Sbjct: 1156 VSVVQIEAFDPDLSSNDKLVYRITSGNPQGFFAVHPKTGLITTTSRKLDREQQDEHILEV 1215
Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVY 137
+G + V I+V D ND P+F + YE +PE + + A D DE +N ++Y
Sbjct: 1433 DGTTTILTQVFIKVIDTNDHRPQFSTSKYEVVIPEDTVPETEILHISAVDQDE-KNRLIY 1491
Query: 138 YSVPEDIP-----FVVDANTGDIRTNKALDYE 164
P F +D TG + T++ LD+E
Sbjct: 1492 TLQGSRDPLSLKKFRLDPATGSLYTSEKLDHE 1523
Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 27/137 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYF-NLD- 67
Y A + +G T+M + A D D G+ G V Y + +D+ T A S NLD
Sbjct: 468 YKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYSITNLNHVPFVIDHFTGAVSTSENLDY 527
Query: 68 -----------PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
A++ P E + +T T+N ++ND P F+ + E ++P
Sbjct: 528 ELMPRVYTLRIRASDWGLPYHREAEVLATITLN----NLNDNTPLFEKINCEGTIPRDLG 583
Query: 117 -GLAVGRVHATDADEGQ 132
G + V A DADE Q
Sbjct: 584 VGEQITTVSAIDADELQ 600
Score = 35.8 bits (81), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 68/175 (38%), Gaps = 39/175 (22%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y A+ + L +++ V A D D + Y ++D N F +DP +G ++
Sbjct: 3340 YTAVVSEDAVLEQSVITVLADDADGPSNSHIHYSIIDGNQGGP--FTIDPV---RGEVKV 3394
Query: 78 ----DEGGLS-----------------STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
D +S +T VNI V+D+ND P F Y + E +
Sbjct: 3395 TKLLDRETISGYTLTVQASDNGSPPRVNTTAVNIDVSDVNDNAPVFSRGNYSVIIQENKP 3454
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
G +V R+ TD D N PFV TG+ KA + +Q + L
Sbjct: 3455 VGFSVLRLVVTDEDSSHNGP---------PFVFTIVTGN--DEKAFEVNQQGVLL 3498
>gi|167516998|ref|XP_001742840.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779464|gb|EDQ93078.1| predicted protein [Monosiga brevicollis MX1]
Length = 7042
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 77/165 (46%), Gaps = 32/165 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLL--DNNTDAASYFNLDPAT-----------EHQGPI 76
G + QV A D+D+G G+V Y L DN T ++F +DP T E Q
Sbjct: 4556 GAVVAQVVAFDRDTGSGGVVRYALTAADNCT---AFFTVDPVTGVLETVTRLDRERQETF 4612
Query: 77 Q------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE---GQDGLAVGRVHA 125
D+G LSST TV+I V D ND P F+ Y F V E GQ V A
Sbjct: 4613 TCVVLAADQGSPSLSSTTTVDIVVLDRNDNEPSFEQTAYAFDVAELFLGQ----FASVSA 4668
Query: 126 TDADEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLY 169
TDAD N + + + E F +D +G + T ALD E +++Y
Sbjct: 4669 TDADTPANTNISFGLLEPSAAFGIDPLSGSLFTKIALDRETREMY 4713
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 79/175 (45%), Gaps = 27/175 (15%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
SL Y + + T++QV+A D D +EY L A SYFNL+ T
Sbjct: 3107 SLAYYEQVGELTPVNTTVLQVEAVDADINDNAAIEYLLFGA---AGSYFNLNSTTGTLAV 3163
Query: 71 ----------------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
+ PI + ATV I++ + N+ P FQS + SV E
Sbjct: 3164 QQSLLPLVGTTVTLEIMARHPIVTSSRSARNATVVIQILNENENAPVFQS-SADISVLEN 3222
Query: 115 -QDGLAVGRVHATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEKQQ 167
G +G++ ATDADEG N V YS+ + FV +DA TG + LDYE +Q
Sbjct: 3223 VTTGTVIGQMVATDADEGANGEVRYSLTQGGSFVSIDAITGVLTLRSGLDYETRQ 3277
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 78/163 (47%), Gaps = 26/163 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ 77
+G + QV A+D DSG V + + T S F +D + E + IQ
Sbjct: 5384 VGTPVAQVNASDADSGVNAEVRFSV----TMGGSIFAIDAVSGVLSVSGTLDFESEETIQ 5439
Query: 78 ------DEG--GLSSTATVNIRVTDINDKNPEFQS-LPYEFSVPEGQDGLAVGRVHATDA 128
D+G L++TATV +++TD ND P F S LP V E +G A+D
Sbjct: 5440 VQIMATDQGTPALTATATVLVQLTDFNDNAPRFVSNLPTSIMVAEDTTPSNLGVWAASDL 5499
Query: 129 DEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
D G NAV+ YS+ D F + + TG + ++LDYE +Q Y
Sbjct: 5500 DSGINAVLSYSLQNDFSGLFALQSTTGLLSLEQSLDYEMRQAY 5542
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
Query: 76 IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA--VGRVHATDADEG 131
+QD G L+S+A+V++ + D++D P F + Y FS+PEG + VG+V AT +D G
Sbjct: 2071 VQDAGTPSLNSSASVHVNIIDVSDNAPVFANNTYTFSLPEGTYATSSVVGQVTATSSDSG 2130
Query: 132 QNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQL 168
NA V YSV F ++A+TG I T + ++++ +
Sbjct: 2131 ANADVAYSVSPTTRFRINASTGVISTQPNMTFDRETI 2167
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 79/172 (45%), Gaps = 25/172 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
+ A + G + +V TD D+G GL+++ L D T S F L P T
Sbjct: 4136 FEATVLENQPAGTIVARVPFTDADAGANGLLQFYLFDAAT-VGSNFLLQPLTGEIVTSRI 4194
Query: 71 ---EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
E QG QD G LSST V I + D+ND P F S + +VPE +
Sbjct: 4195 FDREVQGRYEFRVIAQDSGTPSLSSTMNVTIIIGDLNDNRPRFTSTEFTAAVPEDINATV 4254
Query: 120 VGRV-HATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQL 168
V +ATDAD G NA++ +++ + VDA TG I + DYE Q +
Sbjct: 4255 PALVLNATDADIGVNALLNFTLLSSDWADLFVDAGTGAIFLSA--DYETQTV 4304
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 78/174 (44%), Gaps = 24/174 (13%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKD-----------SGKFGLVEYRLLDNNTDAASYFN 65
LF+ + +G +L + ATD D S +F L L N + F+
Sbjct: 570 LFF----NENSSVGTSLAMLPATDADLHAALVYSLSSSSQFALDS---LTANLTSLVVFD 622
Query: 66 LDPATEHQGPIQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVG 121
DP +Q +G SS+A V + + D+ND P F + Y+ +VPE G +
Sbjct: 623 ADPVALSPISLQMTASDGTFSSSAAVTVVILDVNDNAPVFDQVQYQVTVPESTATGTQLA 682
Query: 122 RVHATDADEGQ-NAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEKQQLYLERV 173
RV ATDAD N + Y++ V V A+TG I ALDYE Q ++ V
Sbjct: 683 RVQATDADRALVNRQLKYTLLNATDIVRVAASTGAITLIGALDYESQTSFVVAV 736
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 74/174 (42%), Gaps = 23/174 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGK-----FGLVEYRLLDNNTDAASYFNLDP----- 68
Y + +G T++Q+ A+D D G+ F V N T A + + P
Sbjct: 1488 YSVSVSEALSVGTTVLQLTASDADVGENAAFFFERVSGSASFNTTLAGAIQVIAPLDYET 1547
Query: 69 ATEHQGPIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHAT 126
T H + DE G + TV I + D ND +P F +L G ++ +V AT
Sbjct: 1548 QTFHTLTVAVLDESGSGALRTVQIYIVDENDNSPVFGALSKVVITEATSPGTSIEQVFAT 1607
Query: 127 DADEGQNAVVYYSVPEDIP-----------FVVDANTGDIRTNKALDYEKQQLY 169
DAD G NA + YS+ +P F + TG + T LD+EK + Y
Sbjct: 1608 DADSGMNAALTYSIVSVVPSVTGETPSSQLFAMAPTTGVVTTTAPLDFEKVKAY 1661
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE---GQDGLAVGRV-HATDAD-EG 131
+D+GGL TA V + V D+ND +P+F S Y +VPE +A+ V ATDAD E
Sbjct: 5751 EDQGGLVGTALVYVTVLDVNDNHPQFASSAYAGAVPENAAANTAIAMSSVFEATDADLEV 5810
Query: 132 QNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
N V Y F ++A TG + T LD E Q++Y
Sbjct: 5811 GNVVSYALENSSALFRIEAETGILYTTAPLDAEVQRVY 5848
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 10/137 (7%)
Query: 42 DSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPE 101
+S LV +D T AASY AT+ + GL++T ++ +++ D+ND PE
Sbjct: 814 NSQSGALVLSIAVDYETAAASYAFEIVATDA------DNGLTATQSIQVQLLDVNDNAPE 867
Query: 102 FQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRT 157
F EF V E + R+ DAD G N V S+ D V+ TG +
Sbjct: 868 FVGSTTEFDVLESASVETVIARIEVRDADSGANGNVTLSIDATFSDAVVVIHPTTGVVSL 927
Query: 158 NKALDYEKQQLYLERVF 174
+LDYE+ Q Y RV
Sbjct: 928 TSSLDYEQDQEYFFRVL 944
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEG--QNAV 135
D G ++TA V + +TD+ND P F Y S+ EGQ G A+ V ATDADEG A
Sbjct: 5021 DVVGNNATARVELTITDVNDNAPVFDLTSYSTSISEGQTG-ALLSVSATDADEGLAGTAG 5079
Query: 136 VYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
+ + + P ++ VDA +G I A+DYE
Sbjct: 5080 IRFRLVDNPNNLSLTVDATSGLITLTAAIDYE 5111
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 85/189 (44%), Gaps = 37/189 (19%)
Query: 5 PIPSALEMTSDSLFYGAMARD-KHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY 63
PIP+A S+ Y A D EL + + TD D G ++ Y + N+ A +
Sbjct: 4437 PIPTA------SVLYLEAAEDFVGELAI----ITGTDADEGANAVISYYIA--NSTAMAR 4484
Query: 64 FNLDPAT--------EHQGPIQD----------EGGLSSTATVNIRVTDINDKNPEFQSL 105
F +D T +++ I++ G S T+N+ VTD+ND+ P F S
Sbjct: 4485 FAIDSVTGNLTCADLDYEESIREMIIVGLTDGLPGSNDSFVTINVNVTDVNDEAPVFDST 4544
Query: 106 PYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKA 160
Y + V E + DG V +V A D D G VV Y++ F VD TG + T
Sbjct: 4545 TY-YDVFENEFDGAVVAQVVAFDRDTGSGGVVRYALTAADNCTAFFTVDPVTGVLETVTR 4603
Query: 161 LDYEKQQLY 169
LD E+Q+ +
Sbjct: 4604 LDRERQETF 4612
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 68/156 (43%), Gaps = 26/156 (16%)
Query: 36 VKATDKDSGKFGLV-------------------EYRLLDNNTDAASYFNLDPATEHQGPI 76
V ATD DSG +G Y L +N D Y P
Sbjct: 3634 VSATDADSGMYGTAGLQYSIVPSSGSHLFYLVGNYLYLRDNVDREVY----PILNIMVQA 3689
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAV 135
+D G L++TA+V + + D+ND P F + + E + G VG +A+D DEG NA+
Sbjct: 3690 RDGGNLTATASVTVSMIDLNDNPPSFPNPNISLGIMENRPVGSFVGLANASDPDEGVNAL 3749
Query: 136 VYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ Y + + F ++ +TG I T D E ++ Y
Sbjct: 3750 IRYEMTGADAGLFAINTSTGAITTAAVFDREAREHY 3785
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 74/188 (39%), Gaps = 47/188 (25%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------- 76
R+ + TL V A+D+D+G + + L +N PAT P
Sbjct: 3831 REDAAVNTTLFGVVASDRDTGANAALRFEL----------WNCAPATLMTCPFGFSGQQL 3880
Query: 77 ------------------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
D G L+ TA+V + + D+ND +P F Y FSV
Sbjct: 3881 LLIAPVDRETIDRYNLTVAVLDAAADAGPLNDTASVTVVIGDVNDNSPIFVQGVYNFSVA 3940
Query: 113 EGQDGLAVGRVHATDADEGQNAVVYY-SVPEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
E +G V ATDAD G NA++ Y S I V + G + LDYE+ +E
Sbjct: 3941 ENTAPGVIGNVAATDADLGINALIRYESANASIASV--GSDGTVYLVGHLDYEQA---VE 3995
Query: 172 RVFLISKF 179
F + F
Sbjct: 3996 VSFYVWAF 4003
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 57/132 (43%), Gaps = 31/132 (23%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL--------- 82
T++Q+ TD D G V Y LL N S F +D H G + G L
Sbjct: 4761 TVLQLIVTDADIGLNAEVNYTLLGN----VSLFEMD----HTGRLYTLGPLDRELQASYF 4812
Query: 83 -------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
S+TATV++ V DIND P F + P S+PE GL + TD+
Sbjct: 4813 LSVLVQNTAPPYFSTTATVSVTVLDINDNAPIFVAPPMSVSIPENAPLGLLPVELEVTDS 4872
Query: 129 DEGQNAVVYYSV 140
D G NA V SV
Sbjct: 4873 DVGTNAQVTLSV 4884
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 32/160 (20%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASY-FNLDPATE----------HQGP----- 75
+L V ATD DSG G + Y +L + +Y F +D +T P
Sbjct: 3427 SLGYVTATDADSGVNGQLTYSIL-----SPTYGFTVDASTGLVTGTVPLDFETRPHLTLT 3481
Query: 76 -IQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE--GQDGLAVGRVHATDAD 129
+ +GG LSS+ VN++V D ND +P F + ++ E D L V +V ATD D
Sbjct: 3482 IVATDGGSPALSSSVLVNVQVQDTNDHSPNFNASSITVTIDENVASDTLVV-QVVATDLD 3540
Query: 130 EGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQ 167
N+++ Y + F +DA++G+I T+ LDYE++Q
Sbjct: 3541 --ANSILTYQLDAIGAALFNIDASSGEIFTDAPLDYEERQ 3578
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 29/186 (15%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLD--------------NNTDAASYFNLDPAT 70
+ +G + QV D D + G + + LL+ N T A Y
Sbjct: 1384 ENQAVGTVVGQVWVEDADLDENGAITFALLNATSFFSIAKGARVGNTTSATLYSQYRFDR 1443
Query: 71 EHQGPI-----QDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
E Q +GG S+T T+ +++ D+ND P+F Y SV E G V
Sbjct: 1444 EAQATYLVALRASDGGADTKSATVTITVQIGDLNDNPPQFDQGSYSVSVSEALSVGTTVL 1503
Query: 122 RVHATDADEGQNAVVYYSVPEDIPFVVDANT---GDIRTNKALDYEKQQLYLERVFLISK 178
++ A+DAD G+NA ++ E + NT G I+ LDYE Q + V ++ +
Sbjct: 1504 QLTASDADVGENAAFFF---ERVSGSASFNTTLAGAIQVIAPLDYETQTFHTLTVAVLDE 1560
Query: 179 FATSYL 184
+ L
Sbjct: 1561 SGSGAL 1566
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
LS++ ++ I V+D+ND P F V E + G A+ ++ ATDAD G NA V SV
Sbjct: 2359 LSNSTSIMITVSDVNDNAPAFADSDISIGVAEDEAIGFALVQLVATDADSGINAAVTLSV 2418
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
F +D N G +R ++ LDYE ++ Y
Sbjct: 2419 DAVSAERFHID-NDGYLRLSQRLDYEVRRAY 2448
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 9/88 (10%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVG----RVHATDADEGQNAVVY 137
LS+ T+ I V D+ND P F+ L YE+ VPE LA+G VHAT++D N
Sbjct: 4927 LSTNITIMINVEDVNDNAPVFEQLVYEYDVPE---DLALGPMGLYVHATESD--LNETTT 4981
Query: 138 YSVPEDIPFVVDANTGDIRTNKALDYEK 165
Y+V ++ V++++G++ ALD E
Sbjct: 4982 YAVEDNNYLGVNSSSGELILLAALDRES 5009
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 16/129 (12%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNT-----DAASYFNLDPATEHQG--------PI 76
G +++ V A D DSG + Y L + + + LD A + + +
Sbjct: 1085 GTSVLTVTALDLDSGVNAALRYTLASDESFLTIGSVSGILTLDSALDFESLSSFSVNVTV 1144
Query: 77 QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNA 134
D G LS+TA + + V D+ND +P F + +V E G ++ ATDAD G N
Sbjct: 1145 TDMGSPALSTTAILQVMVLDVNDNSPVFPNQTLSETVDENTAG-SIAFSGATDADAGDNG 1203
Query: 135 VVYYSVPED 143
V Y++ D
Sbjct: 1204 AVTYALVND 1212
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVY 137
+G S+ +++ V D+ND P F LP ++ E G +V V A D D G NA +
Sbjct: 1046 DGRFVSSMLLSLTVLDVNDNRPIFDGLPSSITLAEDLVTGTSVLTVTALDLDSGVNAALR 1105
Query: 138 YSVPEDIPFV-VDANTGDIRTNKALDYEK 165
Y++ D F+ + + +G + + ALD+E
Sbjct: 1106 YTLASDESFLTIGSVSGILTLDSALDFES 1134
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 21/152 (13%)
Query: 35 QVKATDKDSGKFGLVEYRL-------LDNNTDAASY-----FNLDPATEHQGPIQDEGG- 81
QV AT DSG V Y + ++ +T S F+ + H + G
Sbjct: 2121 QVTATSSDSGANADVAYSVSPTTRFRINASTGVISTQPNMTFDRETIASHTLTVSAVSGP 2180
Query: 82 ----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVV 136
L + V + + DIND P + P ++ E G + ATDAD G NA +
Sbjct: 2181 ENKPLVAQVAVTVAIADINDNTPVLMAAPASLTLSEATAVGTTLHTFEATDADAGVNAAL 2240
Query: 137 YYSVPE--DIPFVVDANTGDIRTNKALDYEKQ 166
+S+ + + F ++ N G+++ +A D+E Q
Sbjct: 2241 TWSLQDTNNGRFSINEN-GELKLERAFDFEAQ 2271
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 8/100 (8%)
Query: 71 EHQGPIQ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHAT 126
EH+ +Q G SS V + VTD+ND P Y FS+PE VG + AT
Sbjct: 2551 EHEVSVQVTNQATGLASSVFVVEVDVTDVNDNAPICSESSYAFSIPENVANGVVGVITAT 2610
Query: 127 DADE-GQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEK 165
DAD G + + V F VD+ G +RT ALD +
Sbjct: 2611 DADSLGLSNASF--VLNSSAFTVDSE-GVVRTAMALDADN 2647
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 78/185 (42%), Gaps = 33/185 (17%)
Query: 15 DSLFYGAMAR----DKHELGVTLMQVKATDKDSGKFGLVEYRLLD------NNTDAASYF 64
+S +GA+++ + G ++ QV ATD DSG + Y ++ T ++ F
Sbjct: 1579 NSPVFGALSKVVITEATSPGTSIEQVFATDADSGMNAALTYSIVSVVPSVTGETPSSQLF 1638
Query: 65 NLDPAT---EHQGPIQDE-------------GGL---SSTATVNIRVTDINDKNPEFQS- 104
+ P T P+ E G+ ++T+ + +TD+ND P +
Sbjct: 1639 AMAPTTGVVTTTAPLDFEKVKAYNITVQATDAGVPPRATTSVFTVELTDVNDNAPALSAG 1698
Query: 105 --LPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALD 162
L Y S + TDAD G NA + +++ F ++A+TG + +D
Sbjct: 1699 FALAYNVSEDSAVGLTLFAAMPVTDADSGLNAALSFTLSSPY-FAINASTGGVTLAAPID 1757
Query: 163 YEKQQ 167
YE+ Q
Sbjct: 1758 YEQVQ 1762
Score = 42.4 bits (98), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 69/165 (41%), Gaps = 26/165 (15%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYFNLDPATEHQ-- 73
+ +G L+Q+ ATD DSG V + +DN+ Y L +++
Sbjct: 2390 EDEAIGFALVQLVATDADSGINAAVTLSVDAVSAERFHIDND----GYLRLSQRLDYEVR 2445
Query: 74 -----GPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHA 125
+GG LSSTA V + VTD++D + V +H
Sbjct: 2446 RAYNVTITATDGGFPALSSTALVRVHVTDVDDNAAVIVDPGVAIMAEDAPVQATVAILHF 2505
Query: 126 TDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQ 167
TDAD G NA +S+ F ++A++G + KALD+E Q
Sbjct: 2506 TDADTGINAQGTWSITAQTSAGQFGINASSGRLVLLKALDFEMLQ 2550
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 76/170 (44%), Gaps = 33/170 (19%)
Query: 32 TLMQVKATDKDSG---KFGL------VEYRLLD--NNTDAASYFNLDP-----------A 69
+L V TD DSG +F L EY +++ N T S +D A
Sbjct: 4045 SLASVVVTDADSGLNQQFDLSVTGEGAEYVVIERENATVRISVLAIDREEYSALNVSLLA 4104
Query: 70 TEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDA 128
T+ P Q S+ ++I VTD+ND P + +E +V E Q G V RV TDA
Sbjct: 4105 TDQGTPSQ-----MSSLPISITVTDVNDNAPTGPA-TFEATVLENQPAGTIVARVPFTDA 4158
Query: 129 DEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLYLERVF 174
D G N ++ + + + F++ TG+I T++ D E Q Y RV
Sbjct: 4159 DAGANGLLQFYLFDAATVGSNFLLQPLTGEIVTSRIFDREVQGRYEFRVI 4208
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 55/114 (48%), Gaps = 11/114 (9%)
Query: 54 LDNNTDAASYFNLDPA-TEHQGPIQDEGGLSST-ATVNIRVTDINDKNPEFQSLPYEFSV 111
LD + ++ YF+L T+HQ P G LSS V I V D+ND P + S F V
Sbjct: 2643 LDADNASSQYFSLSVIITDHQYP----GPLSSVPCPVEITVVDVNDNAPLYTS-SLSFVV 2697
Query: 112 PE-GQDGLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYE 164
E + G +G + TDAD G N VV + + F V N + ALDYE
Sbjct: 2698 AESAETGAVLGPLIFTDADSGNNGVVNVQL-NNSHFAVSNN--QLVLQAALDYE 2748
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 94 DINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV-PEDIPFVVDANT 152
D ND P F +V EG ++G V ATDAD G N + YS+ F VDA+T
Sbjct: 3402 DENDNAPTFPQAVVNSTVREGDTLPSLGYVTATDADSGVNGQLTYSILSPTYGFTVDAST 3461
Query: 153 GDIRTNKALDYEKQ 166
G + LD+E +
Sbjct: 3462 GLVTGTVPLDFETR 3475
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 11/110 (10%)
Query: 35 QVKATDKDSGKFGLVEYR-----LLDNNTDAASYF----NLDPATEHQGPIQ--DEGGLS 83
V ATD D G L+ Y + +D Y + + A E + D G LS
Sbjct: 3950 NVAATDADLGINALIRYESANASIASVGSDGTVYLVGHLDYEQAVEVSFYVWAFDSGNLS 4009
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQN 133
+ V+I V D+ND P F + +PE ++ ++ V TDAD G N
Sbjct: 4010 GSTLVHIMVQDVNDNAPVFSVPRIDIVLPENENRSSLASVVVTDADSGLN 4059
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 59/143 (41%), Gaps = 33/143 (23%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EH 72
G + Q+ ATD D G G V Y L T S+ ++D T E
Sbjct: 3226 GTVIGQMVATDADEGANGEVRYSL----TQGGSFVSIDAITGVLTLRSGLDYETRQRVEV 3281
Query: 73 QGPIQDEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADE 130
+D+G + SS+ T + + D+ND P+F FSV E +G + TDAD
Sbjct: 3282 TVVARDQGAIFQSSSVTFALIIVDVNDNGPQFAGTTATFSVLENTRATFMG-LQVTDAD- 3339
Query: 131 GQNAVVYYSVPEDIPFVVDANTG 153
SVP+ +VD TG
Sbjct: 3340 --------SVPDFSLAIVDDITG 3354
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 18/106 (16%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEF---------QSLPYEFSVPEGQDGLAVGRVHATDAD 129
+G LSSTAT I VTD+ND P +++P+ +V + + TDAD
Sbjct: 4721 DGQLSSTATALITVTDVNDNGPVVAGGTNGAVTENMPFNETVLQ---------LIVTDAD 4771
Query: 130 EGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
G NA V Y++ ++ +TG + T LD E Q Y V +
Sbjct: 4772 IGLNAEVNYTLLGNVSLFEMDHTGRLYTLGPLDRELQASYFLSVLV 4817
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 24/134 (17%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------- 77
++ +G TL + TD D+G + Y +LD + S ++ T ++
Sbjct: 3013 EELSVGTTLSLLNVTDADAGANSQITYSILD----SGSRLGINSTTGELRVLRRLNREST 3068
Query: 78 ---------DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVH 124
+GG S++ T+ I++TDIND P F SL Y V E V +V
Sbjct: 3069 DALVIIVTATDGGAPPRSTSQTITIQLTDINDNVPTFLSLAYYEQVGELTPVNTTVLQVE 3128
Query: 125 ATDADEGQNAVVYY 138
A DAD NA + Y
Sbjct: 3129 AVDADINDNAAIEY 3142
Score = 39.3 bits (90), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 74/166 (44%), Gaps = 21/166 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN-----TDA---ASYFNLDPA 69
F A+ D + V + + ATD D G L+ + LL ++ DA A + + D
Sbjct: 4242 FTAAVPEDINAT-VPALVLNATDADIGVNALLNFTLLSSDWADLFVDAGTGAIFLSADYE 4300
Query: 70 TEH--QGPIQDEGGLSST-----ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVG 121
T+ G ++ E ++ AT I + D+ND P ++P SV E + + +G
Sbjct: 4301 TQTVITGTVKVENVNTTVSTYDVATFTINILDVNDVAPTV-TVPTNVSVYENTLEAVILG 4359
Query: 122 RVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRT--NKALDYEK 165
V TD D G V+ YS F ++A TG + T N LD E
Sbjct: 4360 SVTGTDPDTGLGGVITYSTNSSF-FAINATTGVVTTIPNAPLDREA 4404
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 21/129 (16%)
Query: 37 KATDKDSGKFGLVEYRL---------LDNNTDA---ASYFNLDPATEHQGPI---QDEGG 81
A+D D G L+ Y + ++ +T A A+ F+ + A EH I +D G
Sbjct: 3738 NASDPDEGVNALIRYEMTGADAGLFAINTSTGAITTAAVFDRE-AREHYQVIVTARDAGN 3796
Query: 82 LSS----TATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
L+S TATV I + D ND P+ + +P F+V E + V A+D D G NA +
Sbjct: 3797 LASVFFDTATVEITILDENDNAPQIEQVPTAFTVREDAAVNTTLFGVVASDRDTGANAAL 3856
Query: 137 YYSVPEDIP 145
+ + P
Sbjct: 3857 RFELWNCAP 3865
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 23/117 (19%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------EHQGPIQ--- 77
++QV ATD D+ ++ Y+L + A+ FN+D ++ E Q I
Sbjct: 3531 VVQVVATDLDANS--ILTYQL---DAIGAALFNIDASSGEIFTDAPLDYEERQQVIMVVT 3585
Query: 78 --DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEG 131
DE S + TV + + D+ND P F Y +V E Q V V ATDAD G
Sbjct: 3586 AYDEDSRSDSITVVLNIRDLNDNVPVFSPSSYSTTVVETLQSDYLVAVVSATDADSG 3642
Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 76 IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQN 133
+QD G LS++ + I V ++ND P F + V E + + + V ATDAD +
Sbjct: 5548 VQDSGTPSLSTSMVLRINVGNVNDNAPVFVPVSQTLEVEENAEFVTLVTVQATDAD--GD 5605
Query: 134 AVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQ 167
+ Y P + F + A +G + ALDYE Q
Sbjct: 5606 VLRYRLQPTEHADAFGLQATSGVLVLRDALDYEAVQ 5641
>gi|1107687|emb|CAA60685.1| homologue of Drosophila Fat protein [Homo sapiens]
Length = 4590
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 75/160 (46%), Gaps = 23/160 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ- 77
G +MQ+ ATD D + Y LL + A F L+P T E Q
Sbjct: 3041 GKLIMQISATDADIRSNAEITYTLLGS---GAEKFKLNPDTGELKTSTPLDREEQAVYHL 3097
Query: 78 -----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D GG A++ + + D+ND PEF + PY +V E + G + RV ATDAD G
Sbjct: 3098 LVRATDGGGRFCQASIVVTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDADAG 3157
Query: 132 QNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
N + YS+ + D F ++ +G I+ K LD E Q +Y
Sbjct: 3158 LNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVY 3197
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 86/176 (48%), Gaps = 29/176 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
++ ++ DK E+ ++QV+ATDKD G G V Y +L +TD F++D T
Sbjct: 827 YFVEVSEDK-EVHSEIIQVEATDKDLGPNGHVTYSIL-TDTDT---FSIDSVTGVVNIAR 881
Query: 71 --------EHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
EH I+ +E L ST V + + D+ND P F Y V E
Sbjct: 882 PLDRELQHEHSLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTFIPPNYRVKVREDLP 941
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
+G + + A D D GQ+ V YS+ + + F VD +G +R + LD+EK+Q+Y
Sbjct: 942 EGTVIMWLEAHDPDLGQSGQVRYSLLDHGEGNFDVDKLSGAVRIVQQLDFEKKQVY 997
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 18/132 (13%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI-- 76
L +M+VK TD DSG +G V Y ++++ Y N LD T + I
Sbjct: 2510 LHTLVMEVKTTDGDSGIYGHVTYHIVNDFAKDRFYINERGQIFTLEKLDRETPAEKVISV 2569
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEG 131
+D GG + TVN+ +TD ND P+F++ YE ++ G +V + A+DADEG
Sbjct: 2570 RLMAKDAGGKVAFCTVNVILTDDNDNAPQFRATKYEVNIGSSAAKGTSVVK-SASDADEG 2628
Query: 132 QNAVVYYSVPED 143
NA + Y++ D
Sbjct: 2629 SNADITYAIEAD 2640
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKN 99
D+ SG+ L + LD+ T F++ QD+ + ++ V+I+V D ND +
Sbjct: 2756 DRQSGRLKL--EKSLDHETTKWYQFSILARC-----TQDDHEMVASVDVSIQVKDANDNS 2808
Query: 100 PEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI------PFVVDANT 152
P F+S PYE F V G V ++ A+DAD G N V YS+ + F ++ T
Sbjct: 2809 PVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMET 2868
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G I T K LD+EK+ Y +V
Sbjct: 2869 GWITTLKELDHEKRDNYQIKV 2889
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 25/169 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--------TDAASYF---NLD 67
YGA + +G ++QV A +D + Y ++ N + + F NLD
Sbjct: 3237 YGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLD 3296
Query: 68 PATEHQGPIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--- 118
+ H+ + E GG LS ATVN+ VTDIND P F Y + E D +
Sbjct: 3297 YESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISE--DAVLEQ 3354
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
+V V A DAD N+ ++YS+ + F +D G+++ K LD E
Sbjct: 3355 SVITVMADDADGPSNSHIHYSIIDGNQGSSFTIDPVRGEVKVTKLLDRE 3403
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 75/172 (43%), Gaps = 21/172 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + E G L +V+ATD D+G + Y L+D+ S L + + P+
Sbjct: 3132 YAITVFENTEPGTLLTRVQATDADAGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDR 3191
Query: 78 -------------DEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAV 120
D+G L++T TV + V DIND P F+ Y +V E G V
Sbjct: 3192 ELQAVYTLSLKAVDQGLPRRLTATGTVIVSVLDINDNPPVFEYREYGATVSEDILVGTEV 3251
Query: 121 GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V+A D NA + YS+ E F +D+ TG + + LDYE Y
Sbjct: 3252 LQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEY 3303
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVY 137
+G SS A V ++V D ND +P + Y ++PE G + ++ ATDAD NA +
Sbjct: 3002 DGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPEDVLPGKLIMQISATDADIRSNAEIT 3061
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ F ++ +TG+++T+ LD E+Q +Y
Sbjct: 3062 YTLLGSGAEKFKLNPDTGELKTSTPLDREEQAVY 3095
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 23/160 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + +G +++QV+ATD DS + Y++ N++ + +F++D +T
Sbjct: 2291 YAVTLSEASVIGTSVVQVRATDSDSEPNRGISYQMFGNHSKSHDHFHVDSSTGLISLLRT 2350
Query: 71 -------EHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
+H ++ +GG LSS V + VTD+N P F+ YE + E G
Sbjct: 2351 LDYEQSRQHTIFVRAVDGGMPTLSSDVIVTVDVTDLNGNPPLFEQQIYEARISEHAPHGH 2410
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
V V A DAD + YS+ + FV+D+ TG I
Sbjct: 2411 FVTCVKAYDADSSDIDKLQYSILSGNDHKHFVIDSATGII 2450
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 57/135 (42%), Gaps = 2/135 (1%)
Query: 37 KATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIN 96
KA + G F + R NT + D T ++ + + V ++V D N
Sbjct: 84 KAEEYILGDFCFLRIRTKGGNTAILNREVKDHYTLIVKALEKNTNVEARTKVRVQVLDTN 143
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGD 154
D P F Y S+PE ++ RV ATDAD G N YYS + F + +G
Sbjct: 144 DLRPLFSPTSYSVSLPENTAIRTSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGV 203
Query: 155 IRTNKALDYEKQQLY 169
I LDY + +LY
Sbjct: 204 IVLTGRLDYLETKLY 218
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 75/173 (43%), Gaps = 36/173 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLD--------------------- 67
G ++Q++A+D DSG G V Y L + + F ++
Sbjct: 2827 GSRVIQIRASDADSGTNGQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEKRDNYQ 2886
Query: 68 ---PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRV 123
A++H IQ LSSTA V++ VTD+ND P F + Y+ +V E G + +
Sbjct: 2887 IKVVASDHGEKIQ----LSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSEDDPQGGVIAIL 2942
Query: 124 HATDAD-EGQNAVVYYSVPEDIP---FVVDA--NTGDIRTNKALDYEKQQLYL 170
TDAD E N V Y + P F V+ N + K LD EK+ YL
Sbjct: 2943 STTDADSEEINRQVTYFITGGDPLGQFAVETIQNEWKVYVKKPLDREKRDNYL 2995
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE 142
++ V ++V N PEF Y+ + E G + + A D DEG+N V YS+
Sbjct: 445 ASTKVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTIMSLSAVDPDEGENGYVTYSIAN 504
Query: 143 --DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSY 183
+PF +D TG + T++ LDYE + RV+ + A+ +
Sbjct: 505 LNHVPFAIDHFTGAVSTSENLDYE----LMPRVYTLRIRASDW 543
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 34/178 (19%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-- 70
TS+ ++Y + + + V+++Q++A D DS + Y++ N +F++ P T
Sbjct: 1139 TSEPVYYPEIMENSPK-DVSVVQIEAFDPDSSSNDKLMYKITSGNPQG--FFSIHPKTGL 1195
Query: 71 --------------EH--QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH + + D G S+ A V +++ D ND P+F Y+ +P
Sbjct: 1196 ITTTSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLP 1255
Query: 113 EGQD--------GLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNK 159
E + + RV ATD DEG NA + YS+ E F ++ TG + + +
Sbjct: 1256 EREKPDRERNARREPLYRVIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTGVVSSKR 1313
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 68/163 (41%), Gaps = 27/163 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPI----- 76
++Q+ A D+D K L+ + + F LDPAT E P
Sbjct: 1475 ILQISAVDQDE-KNKLIYTLQSSRDPLSLKKFRLDPATGSLYTSEKLDHEAVSPAHLTVM 1533
Query: 77 ---QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
QD + A + + V+D ND P F + Y+ V E G V +V A D D+G+
Sbjct: 1534 VRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVTALDKDKGK 1593
Query: 133 NAVVYYSVPE------DIPFVVDANTGDIRTNKALDYEKQQLY 169
NA V YS+ F++D G I+T K LD Q Y
Sbjct: 1594 NAEVLYSIESGNIGNIGNSFMIDPVLGSIKTAKELDRSNQAEY 1636
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 19/167 (11%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQGPIQD 78
G ++ +G +++ + +TD D+G G + Y + N D+ +++ + P+
Sbjct: 723 GIQVKENQPVGSSVIFMNSTDLDTGFNGKLVYAVSGGNEDSCFMIDMETGMLKILSPLDR 782
Query: 79 EG-------------GLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VG 121
E G+ A +++ V D ND PEF Y V E ++ + +
Sbjct: 783 ETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFLQESYFVEVSEDKEVHSEII 842
Query: 122 RVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQ 167
+V ATD D G N V YS+ D F +D+ TG + + LD E Q
Sbjct: 843 QVEATDKDLGPNGHVTYSILTDTDTFSIDSVTGVVNIARPLDRELQH 889
Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 11/101 (10%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR--------VHATDADEG 131
GLS+ TV + + D ND P F Y + E +V + A DAD+
Sbjct: 1746 AGLSTNTTVLVHLQDENDNAPVFMQAEYTGLISESASINSVVLTDRNVPLVIRAADADKD 1805
Query: 132 QNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
NA++ Y + E F +D++TG I T +LDYE+ ++
Sbjct: 1806 SNALLVYHIVEPSVHTYFAIDSSTGAIHTVLSLDYEETSIF 1846
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 75/177 (42%), Gaps = 33/177 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYFNLDPATEHQGPIQ 77
Y + +G ++QV A DKD GK V Y + N + + F +DP G I+
Sbjct: 1567 YKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSIESGNIGNIGNSFMIDPVL---GSIK 1623
Query: 78 --------------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
D+G +S +V I VT ++ +P+F S Y + E
Sbjct: 1624 TAKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASPKFTSKEYSVELSETV 1683
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
G VG V A Q++VVY + F ++ ++G I T KALD+E +Y
Sbjct: 1684 SIGSFVGMVTA----HSQSSVVYEIKDGNTGDAFDINPHSGTIITQKALDFETLPIY 1736
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 34/178 (19%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
+L Y A+ + E+G + V A D+DSG+ G V Y L +++ +F + P E
Sbjct: 2086 NLPYYAVVKVDTEVGHVIRYVTAVDRDSGRNGEVHYYLKEHH----EHFQIGPLGEISLK 2141
Query: 76 IQ-----------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
Q D G + +A V + +T +N P F+ Y + E
Sbjct: 2142 KQFELDTLNKEYLVTVVAKDGGNPAFSAEVIVPITVMNKAMPVFEKPFYSAEIAESI--- 2198
Query: 119 AVGRVHA----TDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+VH+ A+ + V+YS+ + P F ++ NTG I LD+E Y
Sbjct: 2199 ---QVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAPLDFEAHPAY 2253
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G + V+I V DIND P F Y ++ E G +V +V ATD+D N + Y
Sbjct: 2265 GAHAEVFVDIIVDDINDNPPVFAQQSYAVTLSEASVIGTSVVQVRATDSDSEPNRGISYQ 2324
Query: 140 V-----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ F VD++TG I + LDYE+ + +
Sbjct: 2325 MFGNHSKSHDHFHVDSSTGLISLLRTLDYEQSRQH 2359
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 30/171 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDN---------------------NTDAASYFNLD 67
+G +M V A D+D+G+ G + Y + D + ++ S++ L
Sbjct: 1049 VGSLVMTVSAHDEDAGRDGEIRYSIRDGSGVGVFKIGEETGVIETSDRLDRESTSHYWLT 1108
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
QG + LSS + I V D+ND P+ Y + E ++V ++ A
Sbjct: 1109 VFATDQGVVP----LSSFIEIYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAF 1164
Query: 127 DADEGQNAVVYYSVPEDIP---FVVDANTGDI-RTNKALDYEKQQLYLERV 173
D D N + Y + P F + TG I T++ LD E+Q ++ V
Sbjct: 1165 DPDSSSNDKLMYKITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILEV 1215
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 7/92 (7%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVY 137
+G + V I+V D ND P+F + YE +PE + ++ A D DE +N ++Y
Sbjct: 1433 DGTTTILTQVFIKVIDTNDHRPQFSTSKYEVVIPEDTAPETEILQISAVDQDE-KNKLIY 1491
Query: 138 YSVPEDIP-----FVVDANTGDIRTNKALDYE 164
P F +D TG + T++ LD+E
Sbjct: 1492 TLQSSRDPLSLKKFRLDPATGSLYTSEKLDHE 1523
Score = 36.2 bits (82), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 32/169 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYF-NLD- 67
Y A + +G T+M + A D D G+ G V Y + +D+ T A S NLD
Sbjct: 468 YKAAFDENVPIGTTIMSLSAVDPDEGENGYVTYSIANLNHVPFAIDHFTGAVSTSENLDY 527
Query: 68 -----------PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
A++ P + E + +T T+N ++ND P F+ + E ++P
Sbjct: 528 ELMPRVYTLRIRASDWGLPYRREVEVLATITLN----NLNDNTPLFEKINCEGTIPRDLG 583
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKAL 161
G + V A DADE Q +V Y + E F ++ N+G + ++L
Sbjct: 584 VGEQITTVSAIDADELQ--LVQYQIEAGNELDLFSLNPNSGVLSLKRSL 630
>gi|410956743|ref|XP_003984998.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23-like [Felis catus]
Length = 2968
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 88/184 (47%), Gaps = 31/184 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA-------- 69
F A ++ +G + + A D D G+ G V Y +L N + A F LD +
Sbjct: 1222 FPMAHIKEDATVGSLVHHITAQDPDEGRNGRVTYSILSGNENMA--FMLDESSGLLTTTC 1279
Query: 70 -------TEHQGPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
T+H + D+G LSS+ T+ I V D+ND+ P FQ YE SV E Q+ G
Sbjct: 1280 PLDYEIKTQHILTLLALDDGIPVLSSSQTLTITVLDVNDEAPVFQQNLYEASVKENQNPG 1339
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLE 171
V RV A D D G N+ + + +P F ++ +TG++ T LD E Q+++
Sbjct: 1340 EFVIRVEAMDRDSGINSKFQFEI---MPGASSGLFKINPDTGEVVTTTTLDREVQEVFTL 1396
Query: 172 RVFL 175
RV +
Sbjct: 1397 RVLV 1400
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 69/162 (42%), Gaps = 30/162 (18%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------------- 82
+ A+D D+G G V Y ++D NTD YF ++ E G + L
Sbjct: 1449 ILASDMDAGDNGAVRYHIIDGNTD--EYFAIN---ETSGDLSTTRALDREQVSNFTLVIL 1503
Query: 83 ---------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQ 132
SS + +RV D ND P F +L Y+ SV E + G V + A D DEG
Sbjct: 1504 CSDLGDPPRSSLVQLQVRVLDDNDHGPSFPTLHYQASVREDAEVGTVVLVLSAVDKDEGL 1563
Query: 133 NAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLER 172
N Y + + F +D+ G +RT LD E + + R
Sbjct: 1564 NGQTEYFLEGETSGTFTIDSVAGALRTRHTLDREARSQHTFR 1605
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 57/109 (52%), Gaps = 13/109 (11%)
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEF-QSLP---YEFSVPEGQD-GLAVGRV 123
T+H P ++ ++ V + VTDIND P F Q LP V EGQ + V V
Sbjct: 865 VTDHGSPPRN-----ASMVVYVSVTDINDNRPYFPQCLPGKELHVKVLEGQPVNMLVTTV 919
Query: 124 HATDADEGQNAVVYYSV-PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
A D DEG NA V YSV PE F +DAN+G+IRT L ++ + Y
Sbjct: 920 FAKDFDEGNNAEVVYSVSPEGSSDHFKIDANSGEIRTTTILSHDYRPSY 968
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 61/122 (50%), Gaps = 10/122 (8%)
Query: 48 LVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPY 107
LV R LD AAS+ + A++H P LSSTA V+I V D+ND P+F SL Y
Sbjct: 2216 LVLLRSLDREV-AASHNLVIVASDHGCP-----PLSSTAIVSIEVLDVNDNPPKFSSLKY 2269
Query: 108 EFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDY 163
V E G + V A D D G +A + Y + E F ++ TG + K LDY
Sbjct: 2270 HAHVKESTPLGSHITVVSANDRDVGPHAEIIYHIISGNERGHFHLEEKTGVLYLIKPLDY 2329
Query: 164 EK 165
E+
Sbjct: 2330 EE 2331
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 72/163 (44%), Gaps = 33/163 (20%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI---------------Q 77
++QV ATD DSG GL+EY +L N A + ++ I
Sbjct: 1860 IIQVFATDLDSGLNGLIEYSILSGNQGDAFHMDVLSGVVTANAILDYEFTNSYSLIVQAT 1919
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPY------EFSVPEGQDGLAVGRVHATDAD 129
D+G LS T+ + I+VTD ND P F LP E S+P G+ V ++ D D
Sbjct: 1920 DKGMPSLSGTSVITIQVTDTNDNAPAF--LPSGAVEIAENSLP----GVIVTQISVHDVD 1973
Query: 130 EGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
A ++ E P F +D NTG + K LD+E+ Y
Sbjct: 1974 LDP-AFIFNFAKESNPGTKFAIDRNTGAVMLVKTLDFEEATEY 2015
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 21/177 (11%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDA-ASYFN 65
+L Y A R+ E+G ++ + A DKD G G EY L +D+ A +
Sbjct: 1534 TLHYQASVREDAEVGTVVLVLSAVDKDEGLNGQTEYFLEGETSGTFTIDSVAGALRTRHT 1593
Query: 66 LDPATEHQGPIQD-------EGGLSSTATVNIRVTDINDKNPEFQSLPYE-FSVPEGQDG 117
LD Q + +G S+T + + V D+ND +P ++ P+E F +
Sbjct: 1594 LDREARSQHTFRAVARDCSVQGSRSTTVIIKVHVMDVNDNDPVWEQNPFEIFLSAQSPPN 1653
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDI--RTNKALDYEKQQLYLE 171
+ A+D D G N V +S E F +D TG++ R N + +Y L L+
Sbjct: 1654 QTTAILTASDPDLGPNGTVMFSFAETQSMFSIDKYTGEVQLRHNPSSEYFPIWLQLK 1710
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 75/188 (39%), Gaps = 32/188 (17%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------- 68
SL Y A ++ LG + V A D+D G + Y ++ N +F+L+
Sbjct: 2266 SLKYHAHVKESTPLGSHITVVSANDRDVGPHAEIIYHIISGNERG--HFHLEEKTGVLYL 2323
Query: 69 --------ATEHQGPIQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG 117
T+ IQ +E S A I V D ND P+F VPE
Sbjct: 2324 IKPLDYEETTKFTLTIQASDEERKHFSFAVAFINVLDDNDHAPQFMFSNLNCVVPENVPV 2383
Query: 118 LA-VGRVHATDADEGQNAVVYYSV----------PEDI-PFVVDANTGDIRTNKALDYEK 165
+ V V+A D D G + YS+ P D PF++D TGDI T + LDYE
Sbjct: 2384 FSTVCSVNALDFDAGPYGELTYSILSPCSTTHGMPRDHHPFLIDPLTGDIHTKQVLDYEN 2443
Query: 166 QQLYLERV 173
Y V
Sbjct: 2444 DSKYCLTV 2451
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 24/170 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------AT 70
Y A ++ G +++V+A D+DSG ++ ++ ++ F ++P T
Sbjct: 1327 LYEASVKENQNPGEFVIRVEAMDRDSGINSKFQFEIMPGA--SSGLFKINPDTGEVVTTT 1384
Query: 71 EHQGPIQD---------EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
+Q+ +GG LS T T+ V D ND PE + V E Q+
Sbjct: 1385 TLDREVQEVFTLRVLVRDGGVPSLSGTTTILCTVEDENDHAPEIIVPSHSIEVLENQEPG 1444
Query: 119 AVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEK 165
+ A+D D G N V Y + + D F ++ +GD+ T +ALD E+
Sbjct: 1445 VAYTILASDMDAGDNGAVRYHIIDGNTDEYFAINETSGDLSTTRALDREQ 1494
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---PEDIPF 146
+ + D+ND +P F S P + G V + A D DEG+N V YS+ E++ F
Sbjct: 1207 VVILDVNDHSPTFMSFPMAHIKEDATVGSLVHHITAQDPDEGRNGRVTYSILSGNENMAF 1266
Query: 147 VVDANTGDIRTNKALDYEKQQLYL 170
++D ++G + T LDYE + ++
Sbjct: 1267 MLDESSGLLTTTCPLDYEIKTQHI 1290
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 21/172 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA---------------S 62
Y + + G +++ VKA D + ++Y + N D
Sbjct: 1742 LYKGTVTENCDAGTSIVTVKAVAPDPIQDS-IKYSIFSGNEDGVFSLCSNSGELTVKEPK 1800
Query: 63 YFNLDPATEHQGPIQDEG-GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-V 120
+ + + E Q I E G + + V + + D+ND P F+ Y+ SVPEGQ A +
Sbjct: 1801 FLDFEVRNEVQLIILAESRGHRAFSKVAVLIQDVNDNLPCFEQSVYQVSVPEGQFYNARI 1860
Query: 121 GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ATD D G N ++ YS+ + F +D +G + N LDYE Y
Sbjct: 1861 IQVFATDLDSGLNGLIEYSILSGNQGDAFHMDVLSGVVTANAILDYEFTNSY 1912
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 68/162 (41%), Gaps = 30/162 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G ++ V ATD+DSG +G V Y L+ D +S F +D T G I
Sbjct: 348 GTEIINVLATDRDSGIYGTVTYELIPG--DLSSLFTIDSTT---GIIYLTSTLSHLESTT 402
Query: 77 -------QDEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHAT 126
+D GGL+S A + I V EF+ Y FSV E + VG V A
Sbjct: 403 LLLMVCARDGGGLTSVINADITIHVLQTMLAPAEFERPKYTFSVYEDVLEDSPVGTVKAK 462
Query: 127 DADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQ 166
++ V Y D+ F + G IRT K LD+E Q
Sbjct: 463 ESLNSSEPVSYRISSGDLDRKFSIHPWLGVIRTQKPLDHETQ 504
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 25/162 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASY------FNLDPATE--HQGPI------- 76
T+ V A D D+G +G + Y +L + F +DP T H +
Sbjct: 2386 TVCSVNALDFDAGPYGELTYSILSPCSTTHGMPRDHHPFLIDPLTGDIHTKQVLDYENDS 2445
Query: 77 --------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
+D+G +++ V + + I++ P F Y F++PE + VG+V A+D
Sbjct: 2446 KYCLTVQAKDKGDSAASLMVWLDIEGIDEFEPIFTQDQYFFNLPEKNKIRQLVGKVEASD 2505
Query: 128 ADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQL 168
AD G + V+ YS+ P F+V+ G+I +AL + Q+
Sbjct: 2506 ADAGIDGVILYSLETPSPFFLVNKTNGNIYLTRALPLIRSQV 2547
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEGQNAVVYYS- 139
LS+ A V + + D+ND P F Y S+ + Q G + V ATD D G V Y
Sbjct: 312 LSAQAFVRVEIEDVNDNAPVFNPSTYVMSISSQTQPGTEIINVLATDRDSGIYGTVTYEL 371
Query: 140 VPEDIP--FVVDANTGDIRTNKALDY 163
+P D+ F +D+ TG I L +
Sbjct: 372 IPGDLSSLFTIDSTTGIIYLTSTLSH 397
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 7/118 (5%)
Query: 54 LDNNTDAA---SYFNLDPATEHQGPIQDEGGLSST-ATVNIRVTDINDKNPEFQSLPYEF 109
+D NT A + + ATE++ IQ + T T+ +RV D+ND P F Y+
Sbjct: 1994 IDRNTGAVMLVKTLDFEEATEYELLIQISDTVHHTEGTLMVRVLDVNDNPPVFSQDSYQA 2053
Query: 110 SVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRT-NKALDYEK 165
+VPE G +V V ATD + +N + Y + F +D G I T N L +K
Sbjct: 2054 TVPESVPVGYSVLTVGATDVESNEN-ISYRILSSSKEFSIDPMNGTIFTINPVLPLDK 2110
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPE 142
S+ VNI V D+ND +P F E + + G A+ A D D QN + Y++
Sbjct: 522 SSTEVNITVIDVNDNHPVFPKASDEVKISQTTLPGTALYLARAQDKDSEQNGFIRYTIAS 581
Query: 143 DIP--FVVDANTGDIRTNKAL 161
P F +D+ G + N++L
Sbjct: 582 QNPSIFSIDSGLGVVYLNESL 602
Score = 35.4 bits (80), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR-VHATDADEGQ----NAVV 136
L+ST +NI V D ND +P FQ E V ++ + +G VH +A +G N+ +
Sbjct: 1089 LNSTVFLNIDVEDQNDHSPSFQE---ELIVISVEENVPIGTLVHVFNAKDGDGSFLNSRI 1145
Query: 137 YYSV----PEDIPFVVDANTGDIRTNKALDYEK 165
Y + P PF++ + G + T LD E+
Sbjct: 1146 QYFIESHHPGMSPFLIHPSFGTLVTASPLDRER 1178
>gi|444705648|gb|ELW47051.1| Protocadherin Fat 1 [Tupaia chinensis]
Length = 4584
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 17/132 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI-- 76
L +++VKATD DSG +G + YR++++ Y N LD T + I
Sbjct: 2501 LHTLVIEVKATDGDSGIYGRLTYRIVNDFAKDRFYTNERGQIFTSEKLDRETPAEKVIAV 2560
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEG 131
+D GG + TVN+ +TD ND P+F++ YE ++ G +V +V A+D DEG
Sbjct: 2561 RLMAKDAGGRVAFCTVNVILTDDNDNAPQFRATKYEVNIGASAAKGTSVVKVLASDTDEG 2620
Query: 132 QNAVVYYSVPED 143
NA V Y++ D
Sbjct: 2621 SNADVTYAIEAD 2632
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 72/160 (45%), Gaps = 23/160 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG---- 74
G +MQV ATD D + Y L + A F L+P T E Q
Sbjct: 3033 GKLIMQVSATDADIRSNAEITYTLYGS---GAEKFKLNPDTGELKTLAPLDREEQAIYNL 3089
Query: 75 --PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D GG A + + + D+ND PEF + PY +V E + G + RV ATDAD G
Sbjct: 3090 VVKATDGGGRFCQANIVLTLEDVNDNAPEFSADPYTITVFENTEPGTLLTRVQATDADAG 3149
Query: 132 QNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
N + YS+ + F ++ +G I+ K LD E Q +Y
Sbjct: 3150 LNRKISYSLINSAEGQFSINELSGIIQLEKPLDRELQAVY 3189
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 86/176 (48%), Gaps = 29/176 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
++ ++ DK EL ++QV+ATDKD G G V Y +L +TD F++D T
Sbjct: 823 YFVEVSEDK-ELSSEIIQVEATDKDLGPNGHVTYSIL-TDTDR---FSIDSVTGVVKIAR 877
Query: 71 --------------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
E + ++E L ST + + + D+ND P F Y V E
Sbjct: 878 PLDREVQHVHYLKIEARDQAKEEPQLFSTVLLKVSLEDVNDNPPMFIPPNYRVKVREDLP 937
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
+G + + A D D GQ++ V YS+ + + F VD +G IR + LD+EK+Q+Y
Sbjct: 938 EGTIIMWLEAYDPDLGQSSQVRYSLMDHGEGNFDVDKLSGAIRIVQQLDFEKKQVY 993
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 23/160 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV+ATD DS + Y++ N++ + YF++D +T
Sbjct: 2282 YAATLSEASVIGTSVIQVRATDSDSEPNRGISYQMFGNHSKSQDYFHIDSSTGLISLVRT 2341
Query: 71 -------EHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
+H+ ++ +GG LSS + + VTD+ND P F YE + E G
Sbjct: 2342 LDYEQFQQHRISVRAVDGGMPPLSSDVIITVDVTDLNDNPPLFDQQIYEARISEHAPHGH 2401
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
V V A DAD + YS+ + FV+D+ TG I
Sbjct: 2402 FVTCVKACDADSSDVDKLEYSILSGNDHKNFVIDSETGII 2441
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 14/141 (9%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKN 99
D+ SG+ L E RL T + L T +D+ + ++ V+I+V D ND +
Sbjct: 2748 DRQSGRLKL-EKRLDHETTKWYQFSILARCT------RDDYEVVASVEVSIQVKDANDNS 2800
Query: 100 PEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE----DI--PFVVDANT 152
P +S PYE F V G V ++ A+D D G N V YS+ + D+ F ++ T
Sbjct: 2801 PLLESNPYEAFIVENLPAGSRVIQIRASDLDSGTNGQVMYSLDQSQSVDVIESFAINMET 2860
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G I T K LD+EK+ Y +V
Sbjct: 2861 GWITTLKELDHEKRDSYQIKV 2881
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 19/170 (11%)
Query: 23 ARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQGPIQDEG- 80
++ H +G ++ + ATD D+G G + Y + N D+ +++ + P+ E
Sbjct: 722 VKENHPVGSDIIFMNATDLDTGFNGKLVYSISGGNEDSCFVIDMETGMLKILSPLDRETT 781
Query: 81 ------------GLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVH 124
G+ A ++IRV D ND PEF Y V E ++ + +V
Sbjct: 782 DKYTLNVTVYDLGVPQKAAWHLLDIRVLDANDNAPEFLQESYFVEVSEDKELSSEIIQVE 841
Query: 125 ATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYLERV 173
ATD D G N V YS+ D F +D+ TG ++ + LD E Q ++ ++
Sbjct: 842 ATDKDLGPNGHVTYSILTDTDRFSIDSVTGVVKIARPLDREVQHVHYLKI 891
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 16/126 (12%)
Query: 61 ASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
AS+F L+ T + ++ V ++V N PEF Y+ S E G
Sbjct: 427 ASHFELEVTTSDR---------KASTRVLVKVLGTNSNPPEFTQTAYKASFDENVPIGTT 477
Query: 120 VGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
V V A D DEG+N V YS+ +PFV+D TG + T++ LDYE + RV+ +
Sbjct: 478 VMSVSAVDPDEGENGYVTYSIANLNHVPFVIDHFTGAVSTSENLDYE----LMPRVYTLR 533
Query: 178 KFATSY 183
A+ +
Sbjct: 534 IRASDW 539
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 71/162 (43%), Gaps = 28/162 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASY--FNLDPATE-------------HQGPI- 76
++Q+ A DKD K L+ L ++ D S F LDPAT HQ +
Sbjct: 1469 ILQISAVDKDE-KNKLI--YTLQSSIDPLSLKKFRLDPATGSLYTSEKLDHEAIHQHVLT 1525
Query: 77 -----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
QD + A + + V+D ND P F S YE V E G V +V A D D+
Sbjct: 1526 VMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTSSSYEGRVYESSAVGSVVLQVTALDKDK 1585
Query: 131 GQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
GQNA V YS+ F +D G I+T K LD Q Y
Sbjct: 1586 GQNAEVLYSIESGNIGNSFTIDPILGSIKTAKELDRSNQVEY 1627
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDA------------ASYF-- 64
YGA + +G ++QV A +D + Y ++ N S F
Sbjct: 3229 YGATVSEDILIGTEVLQVYAASRDIEANADITYSIISGNEHGKFSIDSKTGNLRGSIFII 3288
Query: 65 -NLDPATEHQGPIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG 117
+LD + H+ + E GG LS ATV+I VTDIND P F + S +D
Sbjct: 3289 ESLDYESSHEYYLTVEATDGGTPSLSDVATVSINVTDINDNTPVFSQDTFVVS----EDA 3344
Query: 118 L---AVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYE 164
+ +V V A DAD N+ ++YS+ + PF +D G+++ K LD E
Sbjct: 3345 VLEQSVITVMADDADGPSNSHIHYSITDGNQGSPFTIDPVKGEVKVTKLLDRE 3397
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 59/144 (40%), Gaps = 2/144 (1%)
Query: 37 KATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIN 96
KA + G F + R NT + D T ++ + V +RV D N
Sbjct: 80 KAEEYVLGDFCFLRIRTKGGNTAILNREVKDHYTLIVKAVEKNTNAEARTKVRVRVLDTN 139
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGD 154
D P F Y S+PE ++ RV ATDAD G N YYS + F + +G
Sbjct: 140 DLRPLFSPTSYSVSLPENTAVRTSIARVSATDADIGTNGEFYYSFRDRTDMFAIHPTSGV 199
Query: 155 IRTNKALDYEKQQLYLERVFLISK 178
+ LDY + +LY + + +
Sbjct: 200 VVLTGRLDYMEAKLYEMEILAVDR 223
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVY 137
+G SS A V ++V D ND +P + Y ++PE G + +V ATDAD NA +
Sbjct: 2994 DGTFSSKAIVEVKVLDANDNSPVCEKTLYADTIPEDAPPGKLIMQVSATDADIRSNAEIT 3053
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ F ++ +TG+++T LD E+Q +Y
Sbjct: 3054 YTLYGSGAEKFKLNPDTGELKTLAPLDREEQAIY 3087
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 32/176 (18%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-- 70
TS+ ++Y + + + V+++Q++A D DS + Y++ N +F++ P T
Sbjct: 1135 TSEPVYYPEVMENSPK-DVSVVQIEAFDPDSSSDDKLMYKITSGNPQG--FFSIHPKTGL 1191
Query: 71 --------------EH--QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH + + D G S+ A V +++ D ND P+F Y+ +P
Sbjct: 1192 ITTTSRKLDREQQDEHILEVTVTDNGSPPRSTIARVIVKILDENDNKPQFLQKFYKIRLP 1251
Query: 113 EGQD------GLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNK 159
E + + RV ATD DEG NA + YS+ E F ++ TG + + K
Sbjct: 1252 EREKPERNSKREPLYRVVATDKDEGPNAEISYSIEEGNEHGKFFIEPKTGMVSSKK 1307
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 77/184 (41%), Gaps = 36/184 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLD---------- 67
Y A + G ++Q++A+D DSG G V Y L + D F ++
Sbjct: 2808 YEAFIVENLPAGSRVIQIRASDLDSGTNGQVMYSLDQSQSVDVIESFAINMETGWITTLK 2867
Query: 68 --------------PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
A++H +Q LSSTA V++ VTD+ND P F + Y+ +V E
Sbjct: 2868 ELDHEKRDSYQIKVVASDHGEKVQ----LSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSE 2923
Query: 114 GQ-DGLAVGRVHATDAD--EGQNAVVYYSVPEDI--PFVVD--ANTGDIRTNKALDYEKQ 166
G + + TDAD E V Y+ D F ++ N + K LD EK+
Sbjct: 2924 DDPPGGVIAILSTTDADSEEINRQVTYFITGGDALGQFAIENVQNEWKVYVKKPLDREKR 2983
Query: 167 QLYL 170
YL
Sbjct: 2984 DNYL 2987
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 77/175 (44%), Gaps = 28/175 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
+L Y A+ + E+G + V A D+DSG+ G V Y L +++ +F + PA E
Sbjct: 2077 NLPYYAVVKVDTEVGHVIRSVTAVDRDSGRNGEVHYYLKEHH----EHFQIGPAGEISLI 2132
Query: 76 IQ-----------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
Q D G + +A V + VT +N P F+ Y +PE Q
Sbjct: 2133 KQFELDTLNKEYLVTVVAKDGGNPAFSAEVIVPVTVMNKAMPVFEKPFYSAEIPENIQIH 2192
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
V V A ++ EG V+YS+ + P F ++ NTG I LD+E Y
Sbjct: 2193 SPVVHVQA-NSPEGLK--VFYSITDGDPFSQFTINFNTGVINVIAPLDFEAHPAY 2244
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 25/167 (14%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ---------- 77
E G L +V+ATD D+G + Y L+++ S L + + P+
Sbjct: 3133 EPGTLLTRVQATDADAGLNRKISYSLINSAEGQFSINELSGIIQLEKPLDRELQAVYTLT 3192
Query: 78 ----DEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
D+G L++T+ V + V DIND P F+ Y +V E G V +V+A D
Sbjct: 3193 LKAVDQGLPRRLTATSVVVVSVLDINDNPPVFEYREYGATVSEDILIGTEVLQVYAASRD 3252
Query: 130 EGQNAVVYYSV---PEDIPFVVDANTGDIRTN----KALDYEKQQLY 169
NA + YS+ E F +D+ TG++R + ++LDYE Y
Sbjct: 3253 IEANADITYSIISGNEHGKFSIDSKTGNLRGSIFIIESLDYESSHEY 3299
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 26/172 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------ATE 71
Y + +G ++QV A DKD G+ V Y + N + F +DP A E
Sbjct: 1561 YEGRVYESSAVGSVVLQVTALDKDKGQNAEVLYSIESGNI--GNSFTIDPILGSIKTAKE 1618
Query: 72 HQGPIQ----------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
Q D+G +S +V+I VT ++ P+F S Y + E ++
Sbjct: 1619 LDRSNQVEYDLMVKATDKGNPPMSEITSVHIFVTVADNAAPKFTSREYSVEISE---AIS 1675
Query: 120 VGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
+G Q++VVY +I F ++ ++G I T KALD+E +Y
Sbjct: 1676 IGSFVGMVTAHSQSSVVYEIKDGNIADAFDINPHSGSIFTQKALDFETLPVY 1727
Score = 42.7 bits (99), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 75/183 (40%), Gaps = 31/183 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN--------------------NT 58
Y R+ G +M ++A D D G+ V Y L+D+ +
Sbjct: 928 YRVKVREDLPEGTIIMWLEAYDPDLGQSSQVRYSLMDHGEGNFDVDKLSGAIRIVQQLDF 987
Query: 59 DAASYFNLDPATEHQG-PIQDEGGLSSTATVNIRVTDINDK--NPEFQSLPYEFSVPEGQ 115
+ +NL + +G PI LSST V + V D+N+ P F S + V E
Sbjct: 988 EKKQVYNLTVRAKDKGKPI----SLSSTCYVEVEVIDVNENLHPPVFSSFVEKGIVKEDV 1043
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
G +V V A D D G++ + YS+ + F +D TG I T+ LD E Y
Sbjct: 1044 PIGSSVMTVSAHDEDPGRDGEIRYSIRDGSGVGVFRIDEETGVIETSDRLDRESTPHYWL 1103
Query: 172 RVF 174
V+
Sbjct: 1104 TVY 1106
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 11/101 (10%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR--------VHATDADEG 131
GLS+ T+ + + D ND P F Y + E +V + ATDAD+
Sbjct: 1737 AGLSTNTTLLVHLQDENDNQPVFMQTEYTGLISESASINSVVLTDRNVPLVIRATDADKE 1796
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
NA++ Y + E F +D +TG +R LDYE+ +
Sbjct: 1797 SNALLVYHIVEPSGRKYFAIDPSTGAVRAVLRLDYEETSTF 1837
Score = 39.3 bits (90), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 8/96 (8%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYY- 138
G + V+I V DIND P F Y ++ E G +V +V ATD+D N + Y
Sbjct: 2256 GAHADVFVDIIVEDINDNAPVFVQQSYAATLSEASVIGTSVIQVRATDSDSEPNRGISYQ 2315
Query: 139 -----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
S +D F +D++TG I + LDYE+ Q +
Sbjct: 2316 MFGNHSKSQDY-FHIDSSTGLISLVRTLDYEQFQQH 2350
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 32/169 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYF-NLD- 67
Y A + +G T+M V A D D G+ G V Y + +D+ T A S NLD
Sbjct: 464 YKASFDENVPIGTTVMSVSAVDPDEGENGYVTYSIANLNHVPFVIDHFTGAVSTSENLDY 523
Query: 68 -----------PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
A++ P + E + +T T+N ++ND P F+ + E +VP
Sbjct: 524 ELMPRVYTLRIRASDWGLPYRREVEVLATITLN----NLNDNTPLFEKINCEGTVPRDLG 579
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKAL 161
G + V A DADE Q +V Y + E F ++ N+G + K+L
Sbjct: 580 VGEQITTVSAIDADELQ--LVRYQIEAGNELELFSLNPNSGVLSLKKSL 626
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 29/148 (19%)
Query: 34 MQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EHQGPI 76
+ ++ATD D L+ Y +++ + YF +DP+T +
Sbjct: 1786 LVIRATDADKESNALLVYHIVEPS--GRKYFAIDPSTGAVRAVLRLDYEETSTFHFTVQV 1843
Query: 77 QDEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFS--VPEGQDGLAVGRVHATDADE 130
D G A V I V DIND P F YE S +P + G+ V V+ATDAD
Sbjct: 1844 HDMGVPRLFAEYAANVTIHVIDINDCPPVFSRSLYEASLLLPTYK-GVRVLTVNATDADS 1902
Query: 131 GQNAVVYYSVPEDI---PFVVDANTGDI 155
++ + YS+ E F +D TG I
Sbjct: 1903 NTSSQLMYSITEGNIGEKFSMDYKTGTI 1930
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 76/185 (41%), Gaps = 32/185 (17%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
S + ++ +G ++M V A D+D G+ G + Y + D + F +D E G
Sbjct: 1032 SFVEKGIVKEDVPIGSSVMTVSAHDEDPGRDGEIRYSIRDGS--GVGVFRID---EETGV 1086
Query: 76 IQ--------------------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
I+ D+G LSS + I V D+ND P+ Y V E
Sbjct: 1087 IETSDRLDRESTPHYWLTVYATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPEVME 1146
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDI-RTNKALDYEKQQL 168
++V ++ A D D + + Y + P F + TG I T++ LD E+Q
Sbjct: 1147 NSPKDVSVVQIEAFDPDSSSDDKLMYKITSGNPQGFFSIHPKTGLITTTSRKLDREQQDE 1206
Query: 169 YLERV 173
++ V
Sbjct: 1207 HILEV 1211
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVY 137
+G + V I+V D ND P+F + YE +PE + ++ A D DE +N ++Y
Sbjct: 1427 DGTTTILTQVFIKVIDTNDHRPQFSTSKYEVVIPEDTVPETEILQISAVDKDE-KNKLIY 1485
Query: 138 YSVPEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERVFL 175
P F +D TG + T++ LD+E ++ V +
Sbjct: 1486 TLQSSIDPLSLKKFRLDPATGSLYTSEKLDHEAIHQHVLTVMV 1528
>gi|54013442|dbj|BAD60810.1| protocadherin2-gamma-v5-sCP1-2 [Danio rerio]
Length = 850
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 18/146 (12%)
Query: 23 ARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------E 71
R+ G + V A D D G G V Y N + FN++ T E
Sbjct: 262 VRENSPAGTVMGTVSAADADEGVNGHVSYYFALANKEERELFNINSETGEVTLLAHLDYE 321
Query: 72 HQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVH 124
Q Q D+GGLS T + I VTD ND P Q + + ++ E G V ++
Sbjct: 322 SQNSYQLNINARDKGGLSDTCKIVIDVTDENDNPPTIQLMSFSNTIAENSPVGTTVAVIN 381
Query: 125 ATDADEGQNAVVYYSVPEDIPFVVDA 150
DAD G+N +V++S+ ++IPF +++
Sbjct: 382 VEDADSGKNGLVHFSINQNIPFKIES 407
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 79/163 (48%), Gaps = 26/163 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDN-----NTDAASYFNL--------DPATEHQGP 75
+G T+ + D DSGK GLV + + N + + Y++L + TE+
Sbjct: 373 VGTTVAVINVEDADSGKNGLVHFSINQNIPFKIESTFSEYYSLITDDMLDRETVTEYNIT 432
Query: 76 I--QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
I D+G S T+N++++D+ND P+F S Y+ V E G+ + V A DAD
Sbjct: 433 ILVSDQGSPARHSNKTLNVKISDVNDNPPKFGSDEYKTFVNENNSPGVTILTVKANDADW 492
Query: 131 GQNA-VVYYSVPEDIP-------FVVDANTGDIRTNKALDYEK 165
G NA + Y+ EDI VDA TG + K+ D+E+
Sbjct: 493 GPNAQLSYFLKDEDIRGAPLSSLVSVDALTGTVHAVKSFDFEQ 535
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 75/186 (40%), Gaps = 37/186 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + + GVT++ VKA D D G + Y L D + A +L G +
Sbjct: 468 YKTFVNENNSPGVTILTVKANDADWGPNAQLSYFLKDEDIRGAPLSSLVSVDALTGTVHA 527
Query: 78 ------------------DEGG---LSSTATVNIRVTDINDKNPEF-------QSLPYEF 109
+GG LSS T+ I + D ND P+ S+ E
Sbjct: 528 VKSFDFEQLKSFSFNVTARDGGSPPLSSEVTITINIQDQNDNAPQVLYPVQTGASVVAEI 587
Query: 110 SVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL---D 162
VP D G V +V A D D GQNA + Y + P+ F V G+IRT + + D
Sbjct: 588 -VPRAVDVGYLVTKVVAVDVDSGQNAWLSYKLQKAPDRALFEVGLQNGEIRTVRQVTDKD 646
Query: 163 YEKQQL 168
KQ+L
Sbjct: 647 AVKQKL 652
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 67/168 (39%), Gaps = 27/168 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYFNLDPATEHQGPIQDE 79
LG +A D D G G+ Y+L + + TD Y + E +DE
Sbjct: 159 LGARFPLDRAMDTDVGLNGIQSYKLHPTDNFKLEVHSLTDGNKYIEMILQRELDREERDE 218
Query: 80 ----------GGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
G + TV I VT D ND P + ++ V E G +G V A
Sbjct: 219 IKLVLLATDGGSPQKSGTVKIHVTILDANDNAPVCKQSVFKTEVRENSPAGTVMGTVSAA 278
Query: 127 DADEGQNAVVYY-----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
DADEG N V Y + E F +++ TG++ LDYE Q Y
Sbjct: 279 DADEGVNGHVSYYFALANKEERELFNINSETGEVTLLAHLDYESQNSY 326
>gi|348577159|ref|XP_003474352.1| PREDICTED: cadherin-24 [Cavia porcellus]
Length = 781
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 85/185 (45%), Gaps = 31/185 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV A D D +G +L+ D +F++DP T
Sbjct: 155 YHATVPEMSNVGTSVIQVTAHDADDPSYG-NSAKLVYTVLDGLPFFSVDPQTGVVRTAIP 213
Query: 71 --------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E IQ + GGLS + TV + ++D+ND P+F Y+FSV E +
Sbjct: 214 NMDRETQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAE 273
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV-----PEDIPFVVDANTGD--IRTNKALDYEKQQL 168
G VGR+ A D D G NA++ YS+ E D+ D + K LD+E ++
Sbjct: 274 PGTLVGRLQAQDPDLGDNALMAYSILDGEGSEAFSISTDSQGRDGLLTVRKPLDFEARRS 333
Query: 169 YLERV 173
Y RV
Sbjct: 334 YSFRV 338
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 63/127 (49%), Gaps = 22/127 (17%)
Query: 50 EYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF 109
+Y LL D AS L+P +E I+V DIND P F PY
Sbjct: 114 QYVLLAQAVDRASNRPLEPPSEFI----------------IKVQDINDNPPVFPLGPYHA 157
Query: 110 SVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIPFV-VDANTGDIRTN-KALDY 163
+VPE + G +V +V A DAD+ G +A + Y+V + +PF VD TG +RT +D
Sbjct: 158 TVPEMSNVGTSVIQVTAHDADDPSYGNSAKLVYTVLDGLPFFSVDPQTGVVRTAIPNMDR 217
Query: 164 EKQQLYL 170
E Q+ +L
Sbjct: 218 ETQEEFL 224
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 11/105 (10%)
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVH 124
+DPA +GP +D A+V + V D + P F Y +V E + G VG++
Sbjct: 345 IDPAYLRRGPFKD------VASVRVAVQDAPEP-PAFSQATYHLAVLENKAPGTLVGQIS 397
Query: 125 ATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQ 166
A D D + + Y +P P F ++ G IRT +LD E +
Sbjct: 398 AMDLDSPASPIRYSILPHSDPEYCFSIEPEDGTIRTAVSLDREAR 442
>gi|340373144|ref|XP_003385102.1| PREDICTED: cadherin-23-like [Amphimedon queenslandica]
Length = 1794
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 89/188 (47%), Gaps = 32/188 (17%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN---------TDAASYFN 65
D+ Y + + V L+ V ATD D+ + ++ Y LL ++ D+ S
Sbjct: 544 DNRAYSTNVSEFTQSNVPLLLVSATDADTAPYAVITYHLLSSSPGLGHDLFKIDSTSGLI 603
Query: 66 L-------------DPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
L D E + P DE L+ ATV+I +TD N ++P+F Y FS+
Sbjct: 604 LTKSYLSETSKGCYDLLIEARNP--DEPLLNDNATVDICITDQN-QSPQFSQSFYNFSIN 660
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP-----FVVDANTGDIRTNKALDYEKQ 166
E G +G + ATD DEG N+VV Y++ D P F +++NTG + T LD E Q
Sbjct: 661 ENTPAGHVLGVISATDPDEGSNSVVSYTLITD-PNDNGLFAINSNTGVLSTLSPLDREDQ 719
Query: 167 QLYLERVF 174
L++ V
Sbjct: 720 SLHILTVI 727
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 33/175 (18%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------EHQGP 75
+ +G L Q+ ATD D+G V Y + N + F++DP T +++ P
Sbjct: 1091 ESETVGAILGQLVATDADTGSNAQVSYAIKSQN---GNKFSIDPVTGLITLTDGLDYETP 1147
Query: 76 ---------IQDEG--GLSSTATVNIRVTDINDKNPEFQS--LPYEFSVPE-GQDGLAVG 121
+ D G LS+TA+V + VTDIND P + ++ +PE G +
Sbjct: 1148 PNQYEIIITVTDHGVPPLSATASVRVNVTDINDNPPTIDPPIIVKDYYIPENATHGHFIL 1207
Query: 122 RVHATDADEGQNAVVYY------SVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
V+ATD D G V+ Y S D P F +D+ TGDI +LDYE +Y
Sbjct: 1208 DVNATDPDTGLGGVLSYEFSNGFSTYGDPPLFAIDSVTGDIILVGSLDYESTIIY 1262
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 76/188 (40%), Gaps = 36/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP----ATEHQG 74
Y + + +G + Q+ A+DKD G V +L+ + T YF +DP T Q
Sbjct: 331 YSGTVNENYTVGGDIAQITASDKDEG----VNSQLVFSLTGGEGYFQVDPNNGSVTLSQT 386
Query: 75 PIQ-------------DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ--- 115
I ++GG S+ + +I V+D+ND P F P F+ E
Sbjct: 387 LIHIERRSDFIVTVRVNDGGNPSYSTHVSFHISVSDVNDNTPVFTHAPASFTKQENSPYP 446
Query: 116 ------DGLAVGRVHATDADEGQNAV--VYYSVPEDIPFVVDANTGDIRTNKALDYEKQQ 167
GL V TDAD G NA + S F D TG + LDYE +
Sbjct: 447 VILPLTPGLWTPNV-VTDADLGLNAQFNFFLSANSSPVFSFDNYTGILTLISPLDYESKT 505
Query: 168 LYLERVFL 175
LY +++
Sbjct: 506 LYTALIYV 513
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS 139
+ TA V I +TD ND P + S+ E + G +G++ ATDAD G NA V Y+
Sbjct: 1059 AFNDTALVTITITDANDNPPVLDVNFLDISLLESETVGAILGQLVATDADTGSNAQVSYA 1118
Query: 140 VPED--IPFVVDANTGDIRTNKALDYE 164
+ F +D TG I LDYE
Sbjct: 1119 IKSQNGNKFSIDPVTGLITLTDGLDYE 1145
Score = 39.3 bits (90), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP-ED 143
AT+ + V+DIND +P F S Y +V E G + ++ A+D DEG N+ + +S+ +
Sbjct: 310 ATIVLTVSDINDNSPTFFSGTYSGTVNENYTVGGDIAQITASDKDEGVNSQLVFSLTGGE 369
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLYLER 172
F VD N G + ++ L +++ER
Sbjct: 370 GYFQVDPNNGSVTLSQTL------IHIER 392
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPED 143
T ++ + VTD ND+ P F + Y +V E Q + + V ATDAD AV+ Y +
Sbjct: 526 TLSIRLSVTDANDQPPVFDNRAYSTNVSEFTQSNVPLLLVSATDADTAPYAVITYHLLSS 585
Query: 144 IP------FVVDANTGDIRTNKALDYEKQQLY 169
P F +D+ +G I T L + Y
Sbjct: 586 SPGLGHDLFKIDSTSGLILTKSYLSETSKGCY 617
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 67/162 (41%), Gaps = 37/162 (22%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGG---------- 81
T+ ++A+D D G L + +++ D S F + + G +Q EGG
Sbjct: 778 TIATIQASDVDVGNVNL--FNIIN---DPRSLFKIG---HNTGLLQTEGGPEDFDRETFS 829
Query: 82 ---------------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHA 125
+S A++ +TD+ND P F + + E GL +G A
Sbjct: 830 SYTIIIQVYNADNVQRNSNASITFILTDVNDNTPYFTHTLNDTCIYENSPTGLVIGTYTA 889
Query: 126 TDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYE 164
D D G N+ V++ + + F ++A G ++ LDYE
Sbjct: 890 HDIDIGINSKVFFQITDGNDGDAFSIEALDGSLKVLNQLDYE 931
>gi|395830697|ref|XP_003788455.1| PREDICTED: cadherin-19 [Otolemur garnettii]
Length = 772
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 81/176 (46%), Gaps = 45/176 (25%)
Query: 30 GVTLMQVKATDKD---SGKFGLVEYRLLDNNTDAASYFNLDPAT-------EHQGPIQDE 79
G ++QV A D D SG + Y LL YF+++P T + +QDE
Sbjct: 163 GTLVIQVTARDADDPSSGNHARLLYSLLQ----GQPYFSIEPTTGVIRISSKMDRELQDE 218
Query: 80 --------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVH 124
G LS T +V I+++D+ND P F+ Y +V E G ++GR+
Sbjct: 219 YWVIVQAKDMIGQPGALSGTTSVLIKLSDVNDNKPIFKESLYRLTVSESAPTGTSIGRIT 278
Query: 125 ATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTN-----------KALDYEKQQLY 169
A D D G+NA + YS+ ED D+ T DI TN K +D+E+Q Y
Sbjct: 279 AHDDDTGENAEMDYSIEED-----DSQTFDIITNNETQEGIVILKKNVDFEQQNNY 329
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
IRV+DIND P+F PYE +VPE +G V +V A DAD+ G +A + YS+ + P
Sbjct: 135 IRVSDINDNEPKFLDEPYEATVPEMSPEGTLVIQVTARDADDPSSGNHARLLYSLLQGQP 194
Query: 146 -FVVDANTGDIRTNKALDYEKQQLYL 170
F ++ TG IR + +D E Q Y
Sbjct: 195 YFSIEPTTGVIRISSKMDRELQDEYW 220
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 108 EFSVPEGQDGLA-VGRVHATDADEGQNAVVY--YSVPEDIPFVVDANTGDIRTNKALDYE 164
+FSVPE + +GR+ + D D G N+ Y V + F +D TGD+ + LD E
Sbjct: 49 QFSVPEEMNTTHHIGRLRS-DLDNGNNSFQYKLLGVGAENIFTIDGRTGDLYAKQKLDRE 107
Query: 165 KQQLYLERVFLI 176
+Q LY+ R +I
Sbjct: 108 EQSLYILRAQVI 119
>gi|355687770|gb|EHH26354.1| hypothetical protein EGK_16302 [Macaca mulatta]
Length = 4591
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 68/132 (51%), Gaps = 17/132 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI-- 76
L +M+VK TD DSG +G V Y ++++ Y N LD T + I
Sbjct: 2510 LHTLVMEVKTTDGDSGIYGDVTYHIVNDFAKDRFYINERGQIFTLEKLDRETPAEKVISV 2569
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEG 131
+D GG + TVN+ +TD ND P+F++ YE ++ G +V +V A+DADEG
Sbjct: 2570 RLMAKDAGGKVAFCTVNVILTDDNDNAPQFRATKYEVNIGSSAAKGTSVIKVLASDADEG 2629
Query: 132 QNAVVYYSVPED 143
NA V Y++ D
Sbjct: 2630 SNADVTYAIEAD 2641
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 74/160 (46%), Gaps = 23/160 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI---------- 76
G +MQ+ A D D + Y L + A F L+P T + P+
Sbjct: 3042 GKLIMQISAADADIRSNAEITYTL---SGSGAEKFQLNPDTGELKTSAPLDREEQAVYHL 3098
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D GG A++ + + D+ND PEF + PY +V E + G + RV ATDAD G
Sbjct: 3099 LVRATDRGGRFCQASIVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDADSG 3158
Query: 132 QNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
N + YS+ + D F ++ +G I+ K LD E Q +Y
Sbjct: 3159 LNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVY 3198
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 87/176 (49%), Gaps = 29/176 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
++ ++ DK E+ ++QV+ATDKD G G V Y +L +TD F++D AT
Sbjct: 827 YFVEVSEDK-EVHSEIIQVEATDKDLGPNGHVTYSIL-TDTDK---FSIDSATGVVKIMH 881
Query: 71 --------EHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
EH I+ +E L ST + + + D+ND P+F Y V E
Sbjct: 882 PLDRELQHEHYLKIEARDQAREEPQLFSTVVLKVSLEDVNDNPPKFIPPNYRVKVREDLP 941
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
+G + + A D D Q+ V YS+ + + F VD +G +R + LD+EK+Q+Y
Sbjct: 942 EGTVIMWLEAHDPDLAQSGQVRYSLMDHGEGNFDVDKLSGAVRIVQQLDFEKKQVY 997
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 7/104 (6%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAV 135
QD+ + ++ V+I+V D ND +P F+S PYE F V G V ++ A+DAD G N+
Sbjct: 2787 QDDREMVASVDVSIQVKDANDNSPVFESSPYEAFIVENLPGGSRVIQIRASDADSGTNSQ 2846
Query: 136 VYYSVPEDI------PFVVDANTGDIRTNKALDYEKQQLYLERV 173
V YS+ + F ++ TG I T K LD+E++ Y +V
Sbjct: 2847 VMYSLDQSQSVEVIESFAINMETGWITTLKELDHEERDNYQIKV 2890
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 25/169 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--------TDAASYF---NLD 67
YGA + +G ++QV A +D + Y ++ N + + F NLD
Sbjct: 3238 YGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLD 3297
Query: 68 PATEHQGPIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--- 118
+ H+ + E GG LS ATVN+ VTD+ND P F Y V E D +
Sbjct: 3298 YESSHEYYLTIEATDGGTPSLSDVATVNVNVTDVNDNAPVFSQDTYTAVVSE--DAVLEQ 3355
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
+V V A DAD N+ ++YS+ + PF +D G+++ K LD E
Sbjct: 3356 SVITVLADDADGPSNSHIHYSIIDGNQGGPFTIDPVRGEVKVTKLLDRE 3404
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 75/172 (43%), Gaps = 21/172 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + E G L +V+ATD DSG + Y L+D+ S L + + P+
Sbjct: 3133 YAITVFENTEPGTLLTRVQATDADSGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDR 3192
Query: 78 -------------DEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAV 120
D+G L++T TV + V DIND P F+ Y +V E G V
Sbjct: 3193 ELQAVYTLSLKAVDQGLPRRLTATGTVVVSVLDINDNPPVFEYREYGATVSEDILVGTEV 3252
Query: 121 GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V+A D NA + YS+ E F +D+ TG + + LDYE Y
Sbjct: 3253 LQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEY 3304
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 23/160 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV+ATD DS + Y+L N + + +F++D +T
Sbjct: 2291 YAATLSEASVIGTSVVQVRATDSDSEPNRGISYQLFGNLSKSHDHFHVDSSTGLISLLRT 2350
Query: 71 -------EHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
H ++ +GG LSS V + VTD+ND P F+ YE + E G
Sbjct: 2351 LDYEQSQRHTIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPHGH 2410
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
V V A DAD + YS+ + F++D+ TG I
Sbjct: 2411 FVTCVKAYDADSSDIDKLQYSILSGNDHKHFIIDSATGII 2450
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 2/144 (1%)
Query: 37 KATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIN 96
KA + G F + R NT + D T ++ + + V ++V D N
Sbjct: 84 KAEEYVLGDFCFLRIRTKGGNTAILNREVKDHYTLIVKAVEKNTNMEARTKVRVQVLDTN 143
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGD 154
D P F Y S+PE ++ RV ATDAD G N YYS + F + +G
Sbjct: 144 DLRPLFSPTSYSVSLPENTAIRTSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGV 203
Query: 155 IRTNKALDYEKQQLYLERVFLISK 178
I LDY + +LY + + +
Sbjct: 204 IVLTGRLDYLETKLYEMEILAVDR 227
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE 142
++ V ++V N PEF Y+ + E G V + A D DEG+N V YS+
Sbjct: 445 ASTKVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYSITN 504
Query: 143 --DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSY 183
+PFV+D TG + T++ LDYE + RV+ + A+ +
Sbjct: 505 LNHVPFVIDHFTGAVSTSENLDYE----LMPRVYTLRIRASDW 543
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVY 137
+G SS A V ++V D ND +P + Y ++PE G + ++ A DAD NA +
Sbjct: 3003 DGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPEDVLPGKLIMQISAADADIRSNAEIT 3062
Query: 138 YSVPED--IPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ F ++ +TG+++T+ LD E+Q +Y
Sbjct: 3063 YTLSGSGAEKFQLNPDTGELKTSAPLDREEQAVY 3096
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI 144
A + + V+D ND P F + Y+ V E G V +V A D D+G+NA V YS+ I
Sbjct: 1546 ARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSIESGI 1605
Query: 145 ------PFVVDANTGDIRTNKALDYEKQQLY 169
F++D G I+T K LD Q Y
Sbjct: 1606 FGNIGNSFMIDPVLGSIKTAKELDRSNQVEY 1636
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 19/173 (10%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQGPIQD 78
G ++ +G +++ + +TD D+G G + Y + N D+ +++ + P+
Sbjct: 723 GIQVKENQPVGSSVIFMNSTDLDTGFNGKLVYAISGGNEDSCFMIDMETGMLKILSPLDR 782
Query: 79 EG-------------GLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VG 121
E G+ A +++ V D ND PEF Y V E ++ + +
Sbjct: 783 ETTDKYTLNITVYDLGIPQKAAWRLLDVVVVDANDNPPEFLQESYFVEVSEDKEVHSEII 842
Query: 122 RVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYLERV 173
+V ATD D G N V YS+ D F +D+ TG ++ LD E Q + ++
Sbjct: 843 QVEATDKDLGPNGHVTYSILTDTDKFSIDSATGVVKIMHPLDRELQHEHYLKI 895
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 11/101 (10%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR--------VHATDADEG 131
GLS+ TV++++ D ND +P F Y + E +V + A DAD+
Sbjct: 1746 AGLSTNTTVSVQLQDENDNSPVFMQAEYTGLISESASINSVVLTDRNVPLVIRAADADKD 1805
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
NA++ Y + E F +D++TG I T +LDYE+ +
Sbjct: 1806 SNALLVYHIVEPSVHKYFAIDSSTGAIHTVLSLDYEETSTF 1846
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 74/173 (42%), Gaps = 36/173 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLD--------------------- 67
G ++Q++A+D DSG V Y L + + F ++
Sbjct: 2828 GSRVIQIRASDADSGTNSQVMYSLDQSQSVEVIESFAINMETGWITTLKELDHEERDNYQ 2887
Query: 68 ---PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRV 123
A++H IQ LSSTA V++ VTD+ND P F + Y+ +V E G + +
Sbjct: 2888 IKVVASDHGEKIQ----LSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSEDDPPGGVIAIL 2943
Query: 124 HATDAD-EGQNAVVYYSVPEDIP---FVVD--ANTGDIRTNKALDYEKQQLYL 170
TDAD E N V Y + P F V+ N + K LD EK+ YL
Sbjct: 2944 STTDADSEEINRQVTYFITGGDPLGQFAVENIQNEWKVYVKKPLDREKRDNYL 2996
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 34/178 (19%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-- 70
TS+ ++Y + + + V+++Q++A D D + YR+ N +F + P T
Sbjct: 1139 TSEPVYYPEILENSPK-DVSVVQIEAFDPDLSSNDKLVYRITSGNPQG--FFAVHPKTGL 1195
Query: 71 --------------EH--QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH + + D G S+ A V +++ D ND P+F Y+ +P
Sbjct: 1196 ITTTSRKLDREQQDEHILEVTVTDNGSPPKSTIARVIVKILDENDNKPQFLQKFYKIRLP 1255
Query: 113 EGQD--------GLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNK 159
E + + RV ATD DEG NA + YS+ E F ++ TG + + K
Sbjct: 1256 EREKPDRERNARREPLYRVIATDKDEGPNAEISYSIEEGNEHGKFFIEPKTGVVSSKK 1313
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G + V+I V DIND P F Y ++ E G +V +V ATD+D N + Y
Sbjct: 2265 GAHAEVFVDIIVEDINDNAPVFAQQSYAATLSEASVIGTSVVQVRATDSDSEPNRGISYQ 2324
Query: 140 VPEDIP-----FVVDANTGDIRTNKALDYEKQQLY 169
+ ++ F VD++TG I + LDYE+ Q +
Sbjct: 2325 LFGNLSKSHDHFHVDSSTGLISLLRTLDYEQSQRH 2359
Score = 42.7 bits (99), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 34/178 (19%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
+L Y A+ + E+G + V A D+D+G+ G V Y L +++ YF + P E
Sbjct: 2086 NLPYYAVVKVDTEVGRVIRHVTAVDRDTGRNGDVHYYLKEHH----EYFQIGPLGEISLK 2141
Query: 76 IQ-----------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
Q D G + +A V + +T +N P F+ Y + E
Sbjct: 2142 KQFEPDTLNKEYLVTVVAKDGGNPAFSAEVMVPITVMNKAMPVFEKPFYSAEIAENV--- 2198
Query: 119 AVGRVHA----TDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+VH+ A+ + V+YS+ + P F ++ NTG I LD+E Y
Sbjct: 2199 ---QVHSPVVHVQANSPEGLKVFYSITDGDPFSQFTINFNTGVINVIAPLDFEAHPAY 2253
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 31/180 (17%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN---------------------NT 58
GA+ D +G +M V A D+D+G+ G + Y + D +
Sbjct: 1041 GAVKEDA-PVGSLVMTVSAHDEDAGRDGEIRYSIRDGSGVGVFKIGEETGIIETSDRLDR 1099
Query: 59 DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DG 117
++ S++ L QG + LSS + I V D+ND P+ Y + E
Sbjct: 1100 ESTSHYWLTVFATDQGVVP----LSSFIEIYIEVEDVNDNAPQTSEPVYYPEILENSPKD 1155
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDI-RTNKALDYEKQQLYLERV 173
++V ++ A D D N + Y + P F V TG I T++ LD E+Q ++ V
Sbjct: 1156 VSVVQIEAFDPDLSSNDKLVYRITSGNPQGFFAVHPKTGLITTTSRKLDREQQDEHILEV 1215
Score = 37.7 bits (86), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 69/175 (39%), Gaps = 39/175 (22%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y A+ + L +++ V A D D + Y ++D N F +DP +G ++
Sbjct: 3343 YTAVVSEDAVLEQSVITVLADDADGPSNSHIHYSIIDGNQGGP--FTIDPV---RGEVKV 3397
Query: 78 ----DEGGLS-----------------STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
D +S +T TVNI V+D+ND P F Y + E +
Sbjct: 3398 TKLLDRETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVIIQENKP 3457
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
G +V R+ TD D N PFV TG+ KA + +Q + L
Sbjct: 3458 VGFSVLRLVVTDEDSSHNGP---------PFVFTIVTGN--DEKAFEVNQQGVLL 3501
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 74/177 (41%), Gaps = 33/177 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN-TDAASYFNLDPATEHQGPIQ 77
Y + +G ++QV A DKD GK V Y + + + F +DP G I+
Sbjct: 1567 YKGRVYESAAVGSVVLQVTALDKDKGKNAEVLYSIESGIFGNIGNSFMIDPVL---GSIK 1623
Query: 78 --------------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
D+G +S +V+I VT ++ P+F S Y + E
Sbjct: 1624 TAKELDRSNQVEYDLIVKATDKGSPPMSEVTSVHIFVTVADNAPPKFTSKDYSVEISETV 1683
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
G VG V A Q++VVY + F ++ ++G I T KALD+E +Y
Sbjct: 1684 SIGSFVGMVTA----HSQSSVVYEIKDGNTGDAFDINPHSGSIITQKALDFETLPVY 1736
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVY 137
+G + V I+V D ND P+F + YE +PE + + A D DE +N ++Y
Sbjct: 1433 DGTTTILTQVFIKVIDTNDHRPQFSTSKYEVVIPEDTVPETEILHISAVDQDE-KNRLIY 1491
Query: 138 YSVPEDIP-----FVVDANTGDIRTNKALDYE 164
P F +D TG + T++ LD+E
Sbjct: 1492 TLQGSRDPLSLKKFRLDPATGSLYTSEKLDHE 1523
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 27/137 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYF-NLD- 67
Y A + +G T+M + A D D G+ G V Y + +D+ T A S NLD
Sbjct: 468 YKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYSITNLNHVPFVIDHFTGAVSTSENLDY 527
Query: 68 -----------PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
A++ P + E + +T T+N ++ND P F+ + E ++P
Sbjct: 528 ELMPRVYTLRIRASDWGLPYRREAEVLATITLN----NLNDNTPLFEKINCEGTIPRDLG 583
Query: 117 -GLAVGRVHATDADEGQ 132
G + V A DADE Q
Sbjct: 584 VGEQITTVSAIDADELQ 600
>gi|449498435|ref|XP_002191035.2| PREDICTED: protocadherin-11 X-linked-like [Taeniopygia guttata]
Length = 1231
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 74/165 (44%), Gaps = 24/165 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G L ++ ATD DSG+ + Y L +DA FNLD T E Q
Sbjct: 482 GTQLTKISATDADSGRNAEISYIL---GSDAPPIFNLDRRTGILTAVRKLDREKQDRYSF 538
Query: 76 ---IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
+D G L + ATV + V D ND +P F Y F VPE VG + TDAD
Sbjct: 539 TVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLPMYGTVGLITVTDAD 598
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLERV 173
G NA V S+ F++D TG IR N D E+Q Y +V
Sbjct: 599 AGDNAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQV 643
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
SSTA + + VTD+ND P F+ E SVPE G +V ++HATDAD G NA +++
Sbjct: 230 SSTAILQVTVTDVNDNRPVFKENDVEVSVPENAPVGTSVSQLHATDADLGSNAQIHFYFS 289
Query: 142 EDIP------FVVDANTGDIRTNKALDYEKQQLY 169
I F +D TG I + LD E+ ++
Sbjct: 290 NQISSLAKRLFAIDNTTGLITIREPLDREESPVH 323
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 20/169 (11%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVE--------YRL---LDNN--TDAASYFNLD 67
+ +K L + + DKD+ + G V +RL DN + A++ + +
Sbjct: 368 VLLSEKAPLNTKIALITVMDKDADQNGKVTCFTDHDVPFRLKPVFDNQFLLETATFLDYE 427
Query: 68 PATEHQGPI--QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
E+ I D G L+ +A + I++ D ND P F S+PE G + +
Sbjct: 428 ATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPENNAPGTQLTK 487
Query: 123 VHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+ ATDAD G+NA + Y + D P F +D TG + + LD EKQ Y
Sbjct: 488 ISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTAVRKLDREKQDRY 536
Score = 42.7 bits (99), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 54/132 (40%), Gaps = 27/132 (20%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ--- 77
T+ + TD D+G V +L+ + F +DP T E QG
Sbjct: 588 TVGLITVTDADAGDNAAVTLSILNGRDN----FIIDPLTGVIRPNITFDREQQGSYTFQV 643
Query: 78 ---DEGGL--SSTATVNIRVTDINDKNPEF----QSLPYEFSVPEGQDGLAVGRVHATDA 128
D G L SSTA V I V D+ND P F + YE G V +V A D
Sbjct: 644 KAVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSASPGSVVTKVFAVDN 703
Query: 129 DEGQNAVVYYSV 140
D G NA + YS+
Sbjct: 704 DTGMNAELRYSI 715
>gi|351707763|gb|EHB10682.1| Protocadherin Fat 2 [Heterocephalus glaber]
Length = 4349
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 73/143 (51%), Gaps = 22/143 (15%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA------- 69
++ +A + E G ++++ A DKDSG +G VEY ++ N A F+++P+
Sbjct: 2483 IYEAELAENAKE-GTKVIELLAIDKDSGPYGTVEYTII--NKLAGEKFSINPSGQITTLQ 2539
Query: 70 -------TEHQGPIQ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
TE I+ D GG + TV I +TD ND P+F++ Y S+P
Sbjct: 2540 KLDRENSTERVIAIKVMARDGGGKVAFCTVKIILTDENDNAPQFKASRYTLSIPSNVSKD 2599
Query: 118 LAVGRVHATDADEGQNAVVYYSV 140
V +V A DADEGQNA V YSV
Sbjct: 2600 FPVIQVLAYDADEGQNADVTYSV 2622
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 5/107 (4%)
Query: 71 EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+Q ++ GL+ST TV I + D N+ P F YE +V E G +V V ATD D
Sbjct: 425 HYQLHVRTSPGLAST-TVLIDIVDCNNHAPIFHRSSYEGTVDENIPPGTSVLTVTATDWD 483
Query: 130 EGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYE-KQQLYLERV 173
G+N V YS+ P+ +PF +D G I T+K +DYE +++Y RV
Sbjct: 484 LGENGYVTYSITGPKAVPFSIDPFLGVISTSKPMDYELMRRIYTFRV 530
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG-LAVGRVHATDADEGQNAVVYYS 139
G S ATV + V D+ND P F L Y SV EG V ++ A+D D GQN V Y
Sbjct: 2248 GSFSEATVEVLVEDVNDNPPTFSQLVYTTSVSEGLPAHTPVIQLLASDQDSGQNRDVSYQ 2307
Query: 140 VPED-----IPFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ ED F ++ +TG+I T + LDYE QQ + +V
Sbjct: 2308 IVEDGSDVSTFFQINGSTGEIFTLQELDYEAQQHFHVKV 2346
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI 144
A V + V DIND PEF LPY + +G + G + +V ATD D G N V Y+ ED
Sbjct: 2051 ALVRVSVEDINDNPPEFHHLPYYTIIQDGTEPGDVLFQVSATDKDLGANGTVTYAFTEDY 2110
Query: 145 P-FVVDANTGDIRTNKALDYEKQQLYLERVF 174
F +D GDI K DY+ Y +V
Sbjct: 2111 TYFRIDPYVGDISLKKPFDYQALNKYRLKVI 2141
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 73/158 (46%), Gaps = 27/158 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE----------HQGPIQDE 79
GV L++V+ATD+D GK GL+ + +AS F LDP+T GP Q
Sbjct: 1461 GVELLRVQATDQDKGK-GLIYTIQGSQDPGSASLFQLDPSTGILVTVGKLDLGSGPSQHT 1519
Query: 80 GGL----------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDA 128
+ + V IRV D N P F L YE VP+ G V +V A DA
Sbjct: 1520 LTVMVRDQEMPIKRNFVWVTIRVKDGNLHPPRFTQLHYEARVPDTIVPGSEVLQVRAVDA 1579
Query: 129 DEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALD 162
D G NA V+YS+ ED+ F +D G I + L+
Sbjct: 1580 DRGANAEVHYSLLKGNSEDL-FNIDILQGIITVAQKLN 1616
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVY 137
+G ++ V I V D+ND +P+ L Y V E G + +V ATD+D NA +
Sbjct: 2988 DGKFQTSVPVEISVLDVNDNSPQCTQLLYISRVREDVSPGAFILKVSATDSDADTNAQIM 3047
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
YS+ P F +D +TG++ T ALD E++ +Y
Sbjct: 3048 YSLHGPGAHEFKLDPHTGELTTLTALDRERKDMY 3081
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 76/172 (44%), Gaps = 27/172 (15%)
Query: 14 SDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT--- 70
S +FY + R+ LG +++Q+ A D DS G + + + N F + P T
Sbjct: 1135 SRPVFYPCI-REDAPLGTSVLQLDAWDPDSSSRGKLTFNITSGN--HMGMFVIHPVTGLL 1191
Query: 71 ------------EH--QGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
EH + + D G L ST+ V + + DIND P F + +PE
Sbjct: 1192 STARQLDRESKDEHILEVTVLDNGEPSLKSTSRVVVCILDINDNAPVFSHKLFSVRLPER 1251
Query: 115 QDGL---AVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKAL 161
+ AV R+ A+D D+G N + YS+ E + F +D TG + ++
Sbjct: 1252 PSPVSPGAVYRLVASDPDDGLNGSITYSIEESDEEGFSIDPVTGVVSSSSTF 1303
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 72/170 (42%), Gaps = 26/170 (15%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------ 70
L Y + +D E G L QV ATDKD G G V Y ++ T YF +DP
Sbjct: 2070 LPYYTIIQDGTEPGDVLFQVSATDKDLGANGTVTYAFTEDYT----YFRIDPYVGDISLK 2125
Query: 71 ---EHQG-------PIQDEGGLSSTAT-VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
++Q I +GG T + VT N NP FQS Y+ VPE L
Sbjct: 2126 KPFDYQALNKYRLKVIARDGGTPPLQTEAEVLVTVRNKSNPLFQSPYYKVRVPENI-ALY 2184
Query: 120 VGRVHATDADEGQNAVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQ 166
+H T A + + Y++ E+ + F D TG + LDYE +
Sbjct: 2185 TPILH-TQARSPEGLRLIYNIVEEESLMLFTTDFKTGVLTVTGPLDYESK 2233
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 81/198 (40%), Gaps = 39/198 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLDPAT------- 70
Y A + G T++QV A D+D+G G V YRL ++ ++ F +D T
Sbjct: 2802 YKAFLTENMPGGTTVIQVTANDEDTGNDGQVSYRLSMEQGSNVHELFAIDSETGWITTLK 2861
Query: 71 -----------------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
+H IQ L+S A V + V D ND P+F S Y SV E
Sbjct: 2862 ELDCETYQTYRFHVVAYDHGQTIQ----LASRALVEVSVIDENDNAPQFVSEDYTGSVVE 2917
Query: 114 GQD-GLAVGRVHATDAD-EGQNAVVYYSVPEDIP---FVVDANTGD---IRTNKALDYEK 165
+ G V + DAD QN V + E P F + GD I + K LD E
Sbjct: 2918 NSEPGELVATLKILDADISEQNRQVTCYITEGDPLGQFGIH-QAGDEWRISSRKTLDREH 2976
Query: 166 QQLYLERVFLI-SKFATS 182
YL R+ KF TS
Sbjct: 2977 TAKYLLRITASDGKFQTS 2994
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
L + +V+I+V D+ND P F++ PY+ + E G V +V A D D G + V Y +
Sbjct: 2777 LVALVSVHIQVKDVNDNRPIFEADPYKAFLTENMPGGTTVIQVTANDEDTGNDGQVSYRL 2836
Query: 141 PEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
+ F +D+ TG I T K LD E Q Y
Sbjct: 2837 SMEQGSNVHELFAIDSETGWITTLKELDCETYQTY 2871
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 68/166 (40%), Gaps = 28/166 (16%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGPIQDEG---- 80
E+G T+ ++K D DS G V Y LL F+L P T GP+ E
Sbjct: 831 EVGTTIAELKTKDADSEDNGRVRYTLL----SPTEKFSLHPLTGELVVTGPLDRESEPRY 886
Query: 81 --------------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHA 125
L S + I + D ND +P+ + VPE G + + A
Sbjct: 887 VLKVEARDQPKKGHQLFSVTDLIITLEDANDNSPQCITELSSLRVPEDLPPGTTLTFLDA 946
Query: 126 TDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
D D G V Y + +D+ F VD+ TG + K LD+E++ Y
Sbjct: 947 YDPDLGPAGEVQYVLSDDLHGTFQVDSGTGALSLEKELDFERRAGY 992
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 66/172 (38%), Gaps = 33/172 (19%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI 76
L Y + R+ G +++V ATD D+ + Y L + A F LDP T +
Sbjct: 3014 LLYISRVREDVSPGAFILKVSATDSDADTNAQIMYSL---HGPGAHEFKLDPHTGELTTL 3070
Query: 77 Q-----------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL- 118
D GG S A V + V D+ND P F P FS +
Sbjct: 3071 TALDRERKDMYSFVAKATDGGGRSCQADVTVHVEDVNDNAPRF--FP-GFSRSHCTVAVF 3127
Query: 119 -------AVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKAL 161
V V A D D+G NA V YS+ + F + TG IR K L
Sbjct: 3128 DNTTVKTPVAVVFARDPDQGANAQVAYSLADSAGGQFSIAPATGVIRLEKPL 3179
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 77/188 (40%), Gaps = 33/188 (17%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
S Y ++ G +MQV A D DSG G ++Y L + AA F++DP T G
Sbjct: 1031 SFVYQGQVQEDSPPGTQVMQVTAHDDDSGLDGELQYFLRAGTSLAA--FSIDPDT---GM 1085
Query: 76 IQDEGG----------------------LSSTATVNIRVTDINDKNPEFQSLP--YEFSV 111
IQ + LSS V I + D+ND NP S P Y
Sbjct: 1086 IQTQAALDRESIPYYWLTVLAVDRGSVPLSSVTEVYIEIMDVND-NPPRMSRPVFYPCIR 1144
Query: 112 PEGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
+ G +V ++ A D D + +++ FV+ TG + T + LD E +
Sbjct: 1145 EDAPLGTSVLQLDAWDPDSSSRGKLTFNITSGNHMGMFVIHPVTGLLSTARQLDRESKDE 1204
Query: 169 YLERVFLI 176
++ V ++
Sbjct: 1205 HILEVTVL 1212
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 73/183 (39%), Gaps = 36/183 (19%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI 76
L Y A D G ++QV+A D D G V Y LL N++ FN+D QG I
Sbjct: 1555 LHYEARVPDTIVPGSEVLQVRAVDADRGANAEVHYSLLKGNSE--DLFNIDIL---QGII 1609
Query: 77 --------------------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
+D+G ATV + V + P F S Y VPE
Sbjct: 1610 TVAQKLNQANHIQHTLIVKAEDQGSPRRHDLATVVVHVCPSDSSVPMFSSTEYFVEVPES 1669
Query: 115 QD-GLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
G + V AT E V Y + E D F +++ +G I T K LD+EK Y
Sbjct: 1670 IPIGSPIFLVSATTRSE-----VTYELREGNKDGVFSMNSYSGLISTQKNLDHEKISSYQ 1724
Query: 171 ERV 173
++
Sbjct: 1725 LKI 1727
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSV 140
L + V +R+ D ND P F Y ++ E + + +V ATDAD GQNA +YY+
Sbjct: 128 LEALTRVVVRILDQNDLKPLFSPPSYRVTISEDMPLKSPICKVTATDADLGQNAGLYYTF 187
Query: 141 -PEDIPFVVDANTGDIRTNKALD------YEKQQLYLERVFLISK 178
F V +G + L+ YE Q L ++R+ IS+
Sbjct: 188 NTRSKIFAVHPTSGVVTVAGKLNVTWRGKYELQVLAVDRMRKISE 232
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 68/166 (40%), Gaps = 29/166 (17%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNT---------------------DAASYFNLDPAT 70
+L ++ ATD D+G G + Y + D N + S++ L+
Sbjct: 730 SLARLAATDPDAGFNGKLVYVIADGNEAGCFDIELETGLLTVAAPLDYETTSFYLLNVTV 789
Query: 71 EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
G Q LSS + + V D ND P F Y+ ++ E + G + + DAD
Sbjct: 790 YDLGTPQ----LSSWKLLTVNVKDWNDNAPRFPPGGYQLTISEDTEVGTTIAELKTKDAD 845
Query: 130 EGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
N V Y++ P + F + TG++ LD E + Y+ +V
Sbjct: 846 SEDNGRVRYTLLSPTE-KFSLHPLTGELVVTGPLDRESEPRYVLKV 890
Score = 38.9 bits (89), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
LS TV + +TD+N+ P+F Y V E G + V ATD D N+ + YS+
Sbjct: 3305 LSDVTTVVVNITDVNEHRPQFPKDLYSTRVLENAIVGDVILTVTATDEDGPLNSAITYSL 3364
Query: 141 P---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ F V G ++ KALD+E+ Y
Sbjct: 3365 VGGNQLGHFAVHPEKGALQVAKALDWEQTPSY 3396
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 68/175 (38%), Gaps = 29/175 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----EHQGPIQDEGGLS- 83
G TL + A D D G G V+Y L D D F +D T E + + G +
Sbjct: 938 GTTLTFLDAYDPDLGPAGEVQYVLSD---DLHGTFQVDSGTGALSLEKELDFERRAGYNL 994
Query: 84 --------------STATVNIRVTDINDK--NPEFQSLPYEFSVPE-GQDGLAVGRVHAT 126
+ V + V D+N+ P F S Y+ V E G V +V A
Sbjct: 995 SLWVSDSGRPLPRRTLCRVEVIVLDVNENLHPPRFASFVYQGQVQEDSPPGTQVMQVTAH 1054
Query: 127 DADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
D D G + + Y + F +D +TG I+T ALD E Y V + +
Sbjct: 1055 DDDSGLDGELQYFLRAGTSLAAFSIDPDTGMIQTQAALDRESIPYYWLTVLAVDR 1109
Score = 35.4 bits (80), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 77/187 (41%), Gaps = 38/187 (20%)
Query: 3 PCPIPSALEMTSDSLFYG--AMARD--KHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT 58
P P PS++ + D + Y M D H +GV ++ G+ GL + + +
Sbjct: 1335 PQPRPSSIPLAFDEMPYSFTVMETDPVNHMVGVLSVE--------GRPGLFWFHITGGDK 1386
Query: 59 DAASYFNLDPATEH---QGPIQDEGGLSSTATVNIR--------------VTDINDKNPE 101
D F+++ T P+ G S TV + + ++N P+
Sbjct: 1387 DMD--FDIEKTTGSIVIARPLDTRTGSSYNLTVEVTDGFHTIATQVYIFLIANVNRHRPQ 1444
Query: 102 FQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDIP-----FVVDANTGDI 155
F YE SVP+ G+ + RV ATD D+G+ + +D P F +D +TG +
Sbjct: 1445 FLEAHYEVSVPQDTLPGVELLRVQATDQDKGKGLIYTIQGSQD-PGSASLFQLDPSTGIL 1503
Query: 156 RTNKALD 162
T LD
Sbjct: 1504 VTVGKLD 1510
>gi|221040610|dbj|BAH11982.1| unnamed protein product [Homo sapiens]
Length = 754
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 56/102 (54%), Gaps = 8/102 (7%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY 138
GGL+ T VNI +TD+ND P F + VPE G A+GR+ A D D GQNA + Y
Sbjct: 207 GGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPESSPIGSAIGRIRAVDPDFGQNAEIEY 266
Query: 139 S-VPED----IPFVVDANT--GDIRTNKALDYEKQQLYLERV 173
+ VP D V D +T G I+ K LD+E ++ Y +V
Sbjct: 267 NIVPGDGGNLFDIVTDEDTQEGVIKLKKPLDFETKKAYTFKV 308
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 60/137 (43%), Gaps = 6/137 (4%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH-QGPIQDEGGLSSTATVNIRVTDIN 96
TD+D+ + + + LD T A F ++ + H G TATV I V D+
Sbjct: 280 VTDEDTQEGVIKLKKPLDFETKKAYTFKVEASNLHLDHRFHSAGPFKDTATVKISVLDV- 338
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY---YSVPEDIPFVVDANT 152
D+ P F Y V E G +G V A D D G +AV Y + D F +D N
Sbjct: 339 DEPPVFSKPLYTMEVYEDTPVGTIIGAVTAQDLDVGSSAVRYFIDWKSDGDSYFTIDGNE 398
Query: 153 GDIRTNKALDYEKQQLY 169
G I TN+ LD E Y
Sbjct: 399 GTIATNELLDRESTAQY 415
>gi|149017317|gb|EDL76368.1| rCG49295, isoform CRA_d [Rattus norvegicus]
Length = 869
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 70/139 (50%), Gaps = 15/139 (10%)
Query: 39 TDKDSGKFG-LVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIND 97
T D K+ LV R LD +A + L A++ P++ SST + ++V D+ND
Sbjct: 184 TGADGNKYPELVLERALDREEEAVHHLVL-VASDRGKPVR-----SSTCRIRVKVLDVND 237
Query: 98 KNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDA 150
P F Y SVPE G + V ATD DEG NA V Y + E +P F + +
Sbjct: 238 NAPVFTQPEYRVSVPENMPVGTRILTVTATDTDEGYNAQVTYFL-ERVPGESTDAFELKS 296
Query: 151 NTGDIRTNKALDYEKQQLY 169
+GDI K+LDYEK + +
Sbjct: 297 TSGDITITKSLDYEKAKFH 315
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 74/162 (45%), Gaps = 21/162 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEY---RLLDNNTDA------------ASYFNLDPATEHQ 73
+G ++ V ATD D G V Y R+ +TDA + + A H+
Sbjct: 257 VGTRILTVTATDTDEGYNAQVTYFLERVPGESTDAFELKSTSGDITITKSLDYEKAKFHE 316
Query: 74 GPI--QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
I QD GL + V + V D+ND PEF SVPE G + + D D
Sbjct: 317 IDIEAQDGPGLLTRTKVIVTVLDVNDNAPEFYMTSATASVPEDAPLGTVIALFNVHDRDS 376
Query: 131 GQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
GQNAVV S+PE +PF ++ + + + T +ALD E+ Y
Sbjct: 377 GQNAVVTCSLPEMLPFKLERSVDNYYRLVTTRALDREQFSFY 418
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 15/131 (11%)
Query: 46 FGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSL 105
+ LV R LD + S++N+ + QG LS+ A + ++V DIND P F
Sbjct: 402 YRLVTTRALDR--EQFSFYNITLRAKDQG----SPSLSTDAHLLLQVADINDNPPSFSRG 455
Query: 106 PYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDI----PF----VVDANTGDIR 156
Y +PE G ++ V A D D NA V YS+ ED P ++++TG +
Sbjct: 456 AYSAYIPENNPRGTSIFSVLAYDPDSNDNAHVTYSLAEDTFQGAPLSSYISINSDTGVLY 515
Query: 157 TNKALDYEKQQ 167
++ DYE+ Q
Sbjct: 516 ALRSFDYEQFQ 526
Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 81/188 (43%), Gaps = 36/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA---SYFNLDPAT----- 70
Y A + + G ++ V A D DS V Y L ++ A SY +++ T
Sbjct: 457 YSAYIPENNPRGTSIFSVLAYDPDSNDNAHVTYSLAEDTFQGAPLSSYISINSDTGVLYA 516
Query: 71 ------EHQGPIQ------DEGG--LSSTATVNIRVTDINDKNPE--FQSLP------YE 108
E +Q D G LSS ++++ + D ND PE + +LP E
Sbjct: 517 LRSFDYEQFQDLQLWVIAVDSGKPPLSSNVSLSLFLVDQNDNMPEILYPALPTDGSTGVE 576
Query: 109 FSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL---D 162
+ + G V +V A D D GQNA + Y + E F V +TG++RT +AL D
Sbjct: 577 LAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRD 636
Query: 163 YEKQQLYL 170
KQ L +
Sbjct: 637 ALKQSLVV 644
Score = 35.8 bits (81), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP 145
+V + V D+ND P F E + E G + A DAD G+N + Y + +
Sbjct: 118 SVEVEVIDVNDNAPRFGVEEPELKISETTTPGFRIPLKSAHDADVGENTLQKYKLNSNDH 177
Query: 146 FVVDANTG-------DIRTNKALDYEKQQLY 169
F +D TG ++ +ALD E++ ++
Sbjct: 178 FSLDVRTGADGNKYPELVLERALDREEEAVH 208
>gi|397464861|ref|XP_003804273.1| PREDICTED: cadherin-12 [Pan paniscus]
Length = 570
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 56/102 (54%), Gaps = 8/102 (7%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY 138
GGL+ T VNI +TD+ND P F + VPE G A+GR+ A D D GQNA + Y
Sbjct: 23 GGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPESSPIGSAIGRIRAVDPDFGQNAEIEY 82
Query: 139 S-VPED----IPFVVDANT--GDIRTNKALDYEKQQLYLERV 173
+ VP D V D +T G I+ K LD+E ++ Y +V
Sbjct: 83 NIVPGDGGNLFDIVTDEDTQEGVIKLKKPLDFETKKAYTFKV 124
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 60/137 (43%), Gaps = 6/137 (4%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH-QGPIQDEGGLSSTATVNIRVTDIN 96
TD+D+ + + + LD T A F ++ + H G TATV I V D+
Sbjct: 96 VTDEDTQEGVIKLKKPLDFETKKAYTFKVEASNLHLDHRFHSAGPFKDTATVKISVLDV- 154
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY---YSVPEDIPFVVDANT 152
D+ P F Y V E G +G V A D D G +AV Y + D F +D N
Sbjct: 155 DEPPVFSKPLYTMEVYEDTPVGTIIGAVTAQDLDVGSSAVRYFIDWKSDGDSYFTIDGNE 214
Query: 153 GDIRTNKALDYEKQQLY 169
G I TN+ LD E Y
Sbjct: 215 GTIATNELLDRESTAQY 231
>gi|14039430|gb|AAK53221.1|AF326296_1 protocadherin-betaC [Mus musculus]
Length = 784
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 72/175 (41%), Gaps = 26/175 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
Y +K +G + V A+D D+G FG + Y + + F L+ +T G IQ
Sbjct: 246 LYEVQILEKSPIGSVITTVSASDLDTGNFGAISYVFFHASEEILETFRLNSST---GNIQ 302
Query: 78 --------------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG 117
D GGLS TV +++ D+ND PE +PE
Sbjct: 303 LLKGLDYEAINTYEVDVEAKDGGGLSGKCTVIVQILDVNDNPPELTLSSVNSLIPENSAE 362
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
V +D D G N V S+ D+PF++ + + I + +ALD E + Y
Sbjct: 363 TVVAVFSVSDLDSGDNGRVTCSIQNDLPFILKPSVENFYTIASERALDRESRAEY 417
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS- 139
L++ T+ ++V+DIND P F Y SV E L +G + ATD+D G NA + YS
Sbjct: 431 LTTQHTITVQVSDINDNAPAFTQTSYIMSVRENNSPALHIGTISATDSDSGSNAHITYSL 490
Query: 140 -VPEDIPFVVD------ANTGDIRTNKALDYEKQQLY 169
+P D +D A+ G + +ALDYE Q +
Sbjct: 491 LLPHDPQLALDSLISINADNGQLFALRALDYEALQAF 527
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAV---VYY 138
S T V+I V D ND PEF YE + E G + V A+D D G V++
Sbjct: 223 SGTTQVHILVLDTNDNAPEFTQSLYEVQILEKSPIGSVITTVSASDLDTGNFGAISYVFF 282
Query: 139 SVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
E+I F ++++TG+I+ K LDYE Y
Sbjct: 283 HASEEILETFRLNSSTGNIQLLKGLDYEAINTY 315
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 68/175 (38%), Gaps = 32/175 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL-------------DNNTDAASYFN 65
Y R+ + + + + ATD DSG + Y LL N D F
Sbjct: 456 YIMSVRENNSPALHIGTISATDSDSGSNAHITYSLLLPHDPQLALDSLISINADNGQLFA 515
Query: 66 LDP-------ATEHQGPIQDEG--GLSSTATVNIRVTDINDKNP------EFQSLPYEFS 110
L A E D G LSS A V + V D ND P + S P
Sbjct: 516 LRALDYEALQAFEFHVGATDGGSPALSSQALVRVVVLDDNDNAPFVLYPLQNASTPCTEL 575
Query: 111 VPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKAL 161
+P + G V +V A D D GQNA + + + + F V A+ G++RT + L
Sbjct: 576 LPRAAEPGYLVTKVVAVDRDSGQNAWLSFQLLKSTEPGLFSVWAHNGEVRTARLL 630
>gi|119631140|gb|EAX10735.1| cadherin 12, type 2 (N-cadherin 2), isoform CRA_b [Homo sapiens]
Length = 570
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 56/102 (54%), Gaps = 8/102 (7%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY 138
GGL+ T VNI +TD+ND P F + VPE G A+GR+ A D D GQNA + Y
Sbjct: 23 GGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPESSPIGSAIGRIRAVDPDFGQNAEIEY 82
Query: 139 S-VPED----IPFVVDANT--GDIRTNKALDYEKQQLYLERV 173
+ VP D V D +T G I+ K LD+E ++ Y +V
Sbjct: 83 NIVPGDGGNLFDIVTDEDTQEGVIKLKKPLDFETKKAYTFKV 124
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 60/137 (43%), Gaps = 6/137 (4%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH-QGPIQDEGGLSSTATVNIRVTDIN 96
TD+D+ + + + LD T A F ++ + H G TATV I V D+
Sbjct: 96 VTDEDTQEGVIKLKKPLDFETKKAYTFKVEASNLHLDHRFHSAGPFKDTATVKISVLDV- 154
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY---YSVPEDIPFVVDANT 152
D+ P F Y V E G +G V A D D G +AV Y + D F +D N
Sbjct: 155 DEPPVFSKPLYTMEVYEDTPVGTIIGAVTAQDLDVGSSAVRYFIDWKSDGDSYFTIDGNE 214
Query: 153 GDIRTNKALDYEKQQLY 169
G I TN+ LD E Y
Sbjct: 215 GTIATNELLDRESTAQY 231
>gi|47220937|emb|CAG03470.1| unnamed protein product [Tetraodon nigroviridis]
Length = 675
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 88/184 (47%), Gaps = 29/184 (15%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------- 68
Y A + ++G T++ + ATD D +G +L+ + YF++D
Sbjct: 111 IYFASVPEMSDVGTTVVTITATDADDQTYG-NSAKLVYSILQGQPYFSVDSENGTIKTAL 169
Query: 69 ------ATEH-QGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
EH Q IQ + GGLS T TV+I ++D+ND P F + + + PE
Sbjct: 170 PGMDREVKEHYQVVIQAKDMAGQMGGLSGTTTVSITLSDVNDSPPRFANHSFRVTTPEST 229
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSV--PEDI-PFVVDANT--GDIRTNKALDYEKQQLY 169
+ G A+GR+ A D D G+NA + YS+ DI + D T G I K LDYE ++ Y
Sbjct: 230 EVGGAIGRIKADDPDVGRNAEMEYSIVGGHDIFNIITDQKTQEGVIVIKKTLDYETKKDY 289
Query: 170 LERV 173
RV
Sbjct: 290 EFRV 293
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 67/139 (48%), Gaps = 26/139 (18%)
Query: 37 KATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIN 96
K D++ + ++LD NT+A L+P TE NI++ DIN
Sbjct: 62 KRLDREEKAMYTLNAKVLDRNTNA----ELEPDTEF----------------NIKIHDIN 101
Query: 97 DKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP-FVVDAN 151
D P+F Y SVPE D G V + ATDAD+ G +A + YS+ + P F VD+
Sbjct: 102 DNAPKFVKEIYFASVPEMSDVGTTVVTITATDADDQTYGNSAKLVYSILQGQPYFSVDSE 161
Query: 152 TGDIRTN-KALDYEKQQLY 169
G I+T +D E ++ Y
Sbjct: 162 NGTIKTALPGMDREVKEHY 180
>gi|441619416|ref|XP_003257906.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23-like [Nomascus
leucogenys]
Length = 2917
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 90/184 (48%), Gaps = 31/184 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA-------- 69
F A ++ +G + + A D D G+ G V Y +L N + A F LD +
Sbjct: 1169 FPIAHVKEDVTVGSLVHHITAHDPDEGRNGKVTYSILSGNENMA--FMLDESSGLLTTTC 1226
Query: 70 -------TEHQGPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
T+H + D+G LSS+ T+ I V D+ND+ P F+ YE SV E ++ G
Sbjct: 1227 PLDYEMKTQHILTVLALDDGTPALSSSQTLTITVLDVNDEAPVFKQHLYEASVKENRNPG 1286
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLE 171
V RV A D D G N+ + + + +P F ++++TG++ T LD E Q+++
Sbjct: 1287 EFVTRVEALDRDSGVNSKLQFEI---MPGASFESFQINSDTGEVVTTTILDREIQEVFTL 1343
Query: 172 RVFL 175
RV +
Sbjct: 1344 RVLV 1347
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 59/115 (51%), Gaps = 16/115 (13%)
Query: 71 EHQGPIQ------DEGGLSSTAT--VNIRVTDINDKNPEF-QSLP---YEFSVPEGQD-G 117
EH+G Q D G AT V + VTDIND P F Q LP V EGQ
Sbjct: 801 EHRGHHQMTVLVTDRGSPPRNATMAVYVSVTDINDNRPFFPQCLPGKELHVKVLEGQPVN 860
Query: 118 LAVGRVHATDADEGQNAVVYYSVP-EDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+ V V A D DEG NA V YSV ED P F +DAN+G+IRT L Y+ + Y
Sbjct: 861 MLVTTVFAKDPDEGNNAEVIYSVSSEDSPDHFKIDANSGEIRTTTILSYDYRPSY 915
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 29/180 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------- 68
+L+Y + R+ E+G ++ + A DKD G G EY L D +A+ F +DP
Sbjct: 1481 TLYYQSSMREDAEVGTVVLVLSAVDKDEGLNGQTEYFLTD---EASGAFTIDPMSGTLRT 1537
Query: 69 ---------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYE-FSVP 112
A IQD S+T + + VTD+ND +P + P++ F P
Sbjct: 1538 SNTLNREARSQHTFSAVARDCSIQD--SRSTTVIIKVYVTDVNDNDPVLEQNPFDVFLSP 1595
Query: 113 EGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLE 171
+ V A D D G N V +S E F +D TG+I+ + E ++L+
Sbjct: 1596 QSPTNQTTVIVRADDPDLGPNGTVVFSFAETQSMFSIDKYTGEIQFQQNPSSEYFPIWLQ 1655
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 25/178 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--TDAASY----FNLDPATE- 71
Y + + + T+ + A D D+G +G + Y ++ T SY F +DP T
Sbjct: 2320 YSCIVPENLPISSTICSINALDFDAGPYGELTYSIVSPCFLTHGMSYDHDLFLIDPLTGD 2379
Query: 72 -HQGPI---------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-G 114
H I +D+G +++ V + + I++ P F Y F++PE
Sbjct: 2380 IHAKQILDYENGNKYCLTIQAKDKGDATASLVVWVDIEGIDEFEPVFTQDQYFFTLPEKN 2439
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEKQQLYLE 171
+D +GRV A+DAD G + V+ YS+ PF V+ G+I +AL K QL E
Sbjct: 2440 KDRQLIGRVEASDADAGIDGVILYSLGTSSPFFSVNKTNGNIYLIRALPLIKSQLNKE 2497
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 79/178 (44%), Gaps = 45/178 (25%)
Query: 18 FYGAM---ARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN--NTDAASYFNLDPATEH 72
+GA+ +++++ V +V A+D DSG +G +EY L D + +A F +DP H
Sbjct: 58 LWGAIVFRSQEENTKPVKETEVTASDADSGLYGFIEYSLYDGFLSYEAPQAFRIDP---H 114
Query: 73 QGPI---QD------------------------------EGGLSSTATVNIRVTDINDKN 99
G I QD +GGLS+ A V + + D+ND +
Sbjct: 115 DGQICVSQDIDRERDPATYDLLVKAKDGDEQRMTHLALVKGGLSAQAFVRVDLEDVNDNH 174
Query: 100 PEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNAVVYYS-VPEDIP--FVVDANTG 153
P F Y S+ E Q G + V ATD D G V Y +P D+ F +D+ TG
Sbjct: 175 PMFNPSTYVTSISGETQPGTEIINVLATDQDSGIYGTVAYELIPGDVSSLFTIDSTTG 232
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 75/168 (44%), Gaps = 20/168 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
Y A ++ G + +V+A D+DSG +++ ++ + + N D I
Sbjct: 1274 LYEASVKENRNPGEFVTRVEALDRDSGVNSKLQFEIMPGASFESFQINSDTGEVVTTTIL 1333
Query: 78 D--------------EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
D +GG LSST T+ V D ND PEF Y+ + E Q+ V
Sbjct: 1334 DREIQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEFIVSSYDIEILENQEPEVV 1393
Query: 121 GRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEK 165
V A+D D G N V Y + + D F ++ +G++ T +ALD E+
Sbjct: 1394 YTVLASDMDAGNNRAVEYHIIDGNTDEYFAINEMSGELSTTRALDREQ 1441
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 76/171 (44%), Gaps = 21/171 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA-------------SYFN 65
Y A + ++QV ATD DSG GL+EY +L N + A + +
Sbjct: 1793 YQAAVSEGQLYNAHVIQVFATDLDSGLNGLIEYSILSGNQEEAFQIDALSGVITTKAMLD 1852
Query: 66 LDPATEHQGPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVG 121
+ + + +Q D+G LS+T + ++VTDIND P F + + G+ V
Sbjct: 1853 YELTSTYSLIVQATDKGIPRLSNTTIIKVQVTDINDNAPAFLTSEAVEIAEDSLPGVIVT 1912
Query: 122 RVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
V D D +A ++ E P F +D NTG + K LD+E+ Y
Sbjct: 1913 HVSVHDVDL-NSAFIFSFAKESNPGTKFAIDQNTGVVVLVKTLDFEEMTEY 1962
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 30/156 (19%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------------- 82
V A+D D+G VEY ++D NTD YF ++ E G + L
Sbjct: 1396 VLASDMDAGNNRAVEYHIIDGNTD--EYFAIN---EMSGELSTTRALDREQVSNFTLAIL 1450
Query: 83 ---------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQ 132
SS + +RV D ND +P F +L Y+ S+ E + G V + A D DEG
Sbjct: 1451 CSDLGDPPRSSVIHLQVRVLDANDHSPSFPTLYYQSSMREDAEVGTVVLVLSAVDKDEGL 1510
Query: 133 NAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQ 166
N Y + ++ F +D +G +RT+ L+ E +
Sbjct: 1511 NGQTEYFLTDEASGAFTIDPMSGTLRTSNTLNREAR 1546
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
LSSTA ++I+V D+ND P F SL Y V E G + V A D D G +A + Y++
Sbjct: 2191 LSSTAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGSHITVVSANDRDTGSHAEIIYNI 2250
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEK 165
E F ++ NTG + K LDYE+
Sbjct: 2251 ISGNEKGHFYLEENTGVLYLIKPLDYEE 2278
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---PED 143
T I + D+ND NP F S P + G V + A D DEG+N V YS+ E+
Sbjct: 1151 TAQIVILDVNDHNPTFMSFPIAHVKEDVTVGSLVHHITAHDPDEGRNGKVTYSILSGNEN 1210
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
+ F++D ++G + T LDYE + ++ V +
Sbjct: 1211 MAFMLDESSGLLTTTCPLDYEMKTQHILTVLAL 1243
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 76 IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNA 134
+ + G + V + + D ND +P F+ Y+ +V EGQ A V +V ATD D G N
Sbjct: 1762 LAESSGHRAYCKVAVLIQDENDNSPCFEQSVYQAAVSEGQLYNAHVIQVFATDLDSGLNG 1821
Query: 135 VVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++ YS+ ++ F +DA +G I T LDYE Y
Sbjct: 1822 LIEYSILSGNQEEAFQIDALSGVITTKAMLDYELTSTY 1859
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 70/183 (38%), Gaps = 30/183 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF----------- 64
SL Y ++ LG + V A D+D+G + Y ++ N Y
Sbjct: 2213 SLSYHTHVKESTPLGSHITVVSANDRDTGSHAEIIYNIISGNEKGHFYLEENTGVLYLIK 2272
Query: 65 --NLDPATEHQGPIQD---EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
+ + T+ IQ E S A V + V D ND P+F Y VPE
Sbjct: 2273 PLDYEEMTKFTLTIQASDAEKKHISFAVVFVNVLDDNDHAPQFMFSSYSCIVPENLPISS 2332
Query: 119 AVGRVHATDADEGQNAVVYYSV------------PEDIPFVVDANTGDIRTNKALDYEKQ 166
+ ++A D D G + YS+ D+ F++D TGDI + LDYE
Sbjct: 2333 TICSINALDFDAGPYGELTYSIVSPCFLTHGMSYDHDL-FLIDPLTGDIHAKQILDYENG 2391
Query: 167 QLY 169
Y
Sbjct: 2392 NKY 2394
Score = 40.0 bits (92), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV-- 140
S+ VNI V D+ND +P F E + + G A+ A D D G+N ++ YS+
Sbjct: 463 SSTEVNITVVDVNDNHPAFLRTSDEIRISQTTPPGTALYLARAEDRDSGRNGLIRYSIAG 522
Query: 141 PEDIPFVVDANTGDIRTNKAL 161
P+ F +D G + N +L
Sbjct: 523 PQPGVFAIDRALGVLFLNGSL 543
>gi|383855810|ref|XP_003703403.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog
[Megachile rotundata]
Length = 4739
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 78/176 (44%), Gaps = 28/176 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN--------------------NT 58
Y A + E+G + +V ATD D G + Y +D+ +
Sbjct: 3177 YSATLPEDVEVGTLVTKVHATDDDIGINRKIRYEFIDSADGQFLIAADSGIVTLGKSLDR 3236
Query: 59 DAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+ + +N+ QG Q L+S ++ + V DIND PEF S Y VPE G
Sbjct: 3237 ETKAMYNVTIQALDQGTPQ----LTSVTSLIVNVQDINDNPPEFASKVYFSKVPEIYAVG 3292
Query: 118 LAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
V RV AT D G NA VYYS+ E F +DA +G I + LDYE+ + Y
Sbjct: 3293 TEVARVLATSKDTGVNADVYYSIVGGNEHKKFQIDARSGVITIAEQLDYERARDYF 3348
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 22/157 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG---------------PIQ 77
++++K TD D GK LV ++ N + N + +
Sbjct: 422 VIRLKVTDADEGKNALVFLEIVGGNEGGEFFVNAETGVLYTAMNLDAEKKAFYTLTVSAV 481
Query: 78 DEGGL----SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQ 132
D+G S+A V I V D ND +P F+ + + E + G +V ++ A D D G+
Sbjct: 482 DQGNAGTRKQSSAKVKINVVDTNDNDPTFEQSEMDVWIDENEPAGTSVVKITAKDRDSGE 541
Query: 133 NAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQ 167
NA + YS+ + +PF +D +G +RT + LDYE +
Sbjct: 542 NAYISYSIDNIQKVPFEIDPFSGIVRTKQVLDYETMK 578
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 70/142 (49%), Gaps = 14/142 (9%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVT-- 93
V + D D G +V Y LD ++ + N+ + D G +A+ + VT
Sbjct: 821 VFSIDPDKGNLNVVGY--LDRERESEYFLNIS--------VYDLGKPQKSASRMLPVTVL 870
Query: 94 DINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYS-VPEDIPFVVDAN 151
D+ND P+F+ F + E +G V R +ATDAD G+NA V YS V E F VD
Sbjct: 871 DVNDNAPKFEKSLASFRISETALNGTNVWRANATDADTGENARVTYSLVTETNDFRVDPV 930
Query: 152 TGDIRTNKALDYEKQQLYLERV 173
TG + LD E+Q++Y R+
Sbjct: 931 TGVLSVFGRLDRERQEIYELRI 952
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 63/131 (48%), Gaps = 9/131 (6%)
Query: 43 SGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEF 102
SG++ + LLD T AA +NL +G Q S V + + D+ND P F
Sbjct: 349 SGEYNIEVLHLLDRET-AAQGYNLTLRAMDRGVPQK----FSYKFVPVHLADLNDNAPVF 403
Query: 103 QSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTN 158
YE VPE V R+ TDADEG+NA+V+ + E F V+A TG + T
Sbjct: 404 NREIYEVKVPETAPINTPVIRLKVTDADEGKNALVFLEIVGGNEGGEFFVNAETGVLYTA 463
Query: 159 KALDYEKQQLY 169
LD EK+ Y
Sbjct: 464 MNLDAEKKAFY 474
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 73/169 (43%), Gaps = 33/169 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EH 72
G + + ATD D+G+ V Y L+ D F +DP T E
Sbjct: 895 GTNVWRANATDADTGENARVTYSLVTETND----FRVDPVTGVLSVFGRLDRERQEIYEL 950
Query: 73 QGPIQDEGG-------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVH 124
+ +D GG L S A V + V D+ND P F Y + E V V
Sbjct: 951 RIRARDNGGKGTDTPPLYSDALVRVTVDDVNDNAPTFALSSYTVKIREDVPIWTVVAVVD 1010
Query: 125 ATDADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQLY 169
ATD DEG V Y + + + F VD +G IRT ++LD+E++Q++
Sbjct: 1011 ATDPDEGAGGDVEYFLSDAMESEGFFKVDKVSGTIRTVQSLDFEERQVH 1059
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV 140
L++ A + ++V D ND P+F+S PY + E ++G ++ ++ A D D G N V YS
Sbjct: 2840 LTALAEITLQVLDENDHAPKFESNPYGIILAENIEEGTSILKIIAHDDDLGSNGEVRYSF 2899
Query: 141 PEDIP-----FVVDANTGDIRTNKALDYEKQQLY 169
DI F VDA TG I T LD EKQ Y
Sbjct: 2900 GTDIGELANVFTVDAYTGWISTLVQLDKEKQPEY 2933
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 25/162 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPI-- 76
G ++ V ATD D + + L +N D F+LD T E Q
Sbjct: 3084 GTYVLTVLATDYDDEPNAKLRFYLTGDNNDK---FSLDKETGVLKTVGQLDRESQAKYSL 3140
Query: 77 ------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
+D+ ++ + I ++D+ND P+F Y ++PE + G V +VHATD D
Sbjct: 3141 TAHVQDRDKPSWECSSQLEILISDLNDNPPKFTMQTYSATLPEDVEVGTLVTKVHATDDD 3200
Query: 130 EGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
G N + Y + D F++ A++G + K+LD E + +Y
Sbjct: 3201 IGINRKIRYEFIDSADGQFLIAADSGIVTLGKSLDRETKAMY 3242
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 78/176 (44%), Gaps = 21/176 (11%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN------TDA-------AS 62
S Y + + + +G + +V AT KD+G V Y ++ N DA A
Sbjct: 3278 SKVYFSKVPEIYAVGTEVARVLATSKDTGVNADVYYSIVGGNEHKKFQIDARSGVITIAE 3337
Query: 63 YFNLDPATEHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDG 117
+ + A ++ IQ +GG LS+ ATVNI V D ND P F + Y SV E + G
Sbjct: 3338 QLDYERARDYFLTIQAIDGGIPPLSNHATVNITVIDSNDNAPIFSEVSYRASVREDAKIG 3397
Query: 118 LAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
V +V A D D +N V Y + F +D TG I LD E+ Y+
Sbjct: 3398 EKVTQVFANDLDSEENGNVSYYIERGDRQKQFSIDQKTGQITVAAPLDREEIASYV 3453
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 85/195 (43%), Gaps = 24/195 (12%)
Query: 11 EMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA- 69
E T DS Y + G ++++V + D D+G V Y + ++ ++ F++DP
Sbjct: 2340 EFTQDS--YNISVSEAAPFGTSVLKVSSRDNDTGINQQVRYAIQNDTENSTDLFHIDPEE 2397
Query: 70 ---------------TEHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
+ H I + G LSSTA V + V D+ND P+F+ Y S+
Sbjct: 2398 GVIFLKRSLDHEAHESHHFTVIAIDRGVPSLSSTAHVWVTVIDMNDNPPKFEQPSYTCSL 2457
Query: 112 PE-GQDGLAVGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQL 168
E + G V V A+D D + Y V E + +D +TG I ++ +++L
Sbjct: 2458 SEHAERGQFVTVVSASDPDYVDEKLTYTIVGGNEQQTYNIDQSTGVITLINMQNFGEKKL 2517
Query: 169 YLERVFLISKFATSY 183
+ V + TS+
Sbjct: 2518 TMLNVSVTDNVYTSF 2532
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR-----------VHATDA 128
G + V + V D ND P+F Y + EG ++G + A DA
Sbjct: 1797 AGAKAQCNVIVHVLDRNDNAPKFLQATYTGEISEGA---SIGSLVLTNTSSPLVIKAEDA 1853
Query: 129 DEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
D NA++ Y + ED+P F +D++TG IRT LD+E
Sbjct: 1854 DSELNALLNYDIVEDLPRKYFHIDSSTGAIRTVMVLDHE 1892
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
VN+ + DIND P F +LPY V + Q G + +VHA D D G N V Y + +
Sbjct: 2124 VNVTILDINDNCPMFVNLPYYAVVSVDAQKGDVITKVHAVDMDSGDNGEVRYELKKGHGE 2183
Query: 146 -FVVDANTGDIRTNKALDYEKQQLYL 170
F V TG+I + L+ ++ L
Sbjct: 2184 LFKVCRKTGEISLKQNLEGHNREYQL 2209
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L + T+ + V D ND NP F YE ++ E ++ RV A DAD G+N +YYS
Sbjct: 165 LEADTTIVVTVLDTNDLNPLFYPTEYEANITEDTSLHRSILRVMAEDADLGRNGEIYYSF 224
Query: 141 PEDI-PFVVDANTGDIRTNKALDYEKQQLY 169
E+ F V +G I + L Y ++ ++
Sbjct: 225 AEETDQFAVHPVSGVITLTRPLRYSERAIH 254
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVP 141
+S V I + N NP+F + E +V E Q G V V A D D G V Y++
Sbjct: 2530 TSFTRVKIEILPANRHNPKFPNPVVEVTVLENQLPGRLVTSVIANDEDFGDYGTVIYTIA 2589
Query: 142 EDIP---FVVDANTGDIRTNKALDYEKQQLY 169
D+ F ++ TG+I T K LD E+Q+LY
Sbjct: 2590 SDLMKEIFDINRLTGEIVTRKKLDREEQKLY 2620
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS 139
G+ + V+I V D+ND PEF Y SV E G +V +V + D D G N V Y+
Sbjct: 2320 GVYAEVLVSILVLDVNDCPPEFTQDSYNISVSEAAPFGTSVLKVSSRDNDTGINQQVRYA 2379
Query: 140 VPEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
+ D F +D G I ++LD+E + + V I +
Sbjct: 2380 IQNDTENSTDLFHIDPEEGVIFLKRSLDHEAHESHHFTVIAIDR 2423
Score = 43.1 bits (100), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 18/129 (13%)
Query: 30 GVTLMQVKATDKDSG----KFGLVE-----YRLLDNNT----DAASYFNLDPATEH--QG 74
GV+++Q++A D+D F + Y L+++ T + + + EH +
Sbjct: 1216 GVSVLQIRAFDRDVSPQQFTFSITSGNPEGYFLINSTTGLITTSGRKLDRENQAEHVLEV 1275
Query: 75 PIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEG 131
++D+G LSST V I V DIND PEF+ Y +P + +V A D D G
Sbjct: 1276 TVRDDGRPSLSSTTRVVIAVADINDHGPEFEQKFYTVQIPASPSTDKPLFQVLANDKDIG 1335
Query: 132 QNAVVYYSV 140
N + YS+
Sbjct: 1336 DNGKIQYSI 1344
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 67/166 (40%), Gaps = 34/166 (20%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------------------- 68
+G ++QV A D+D G + Y + N + F++DP
Sbjct: 1631 VGAAVVQVWAIDRDRGDNAKITYSITSGN--VGNMFSIDPELGVIRVARELDLSISSEYI 1688
Query: 69 ----ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRV 123
AT+H P L++T V++ VT ++ P F + E Q G V V
Sbjct: 1689 LLVKATDHGSP-----ALTNTVPVHVMVTMADNAPPRFIQKELSAEIYENQQLGTYVKHV 1743
Query: 124 HATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A Q +V + +D F V+ +TG I LDYEK++ Y
Sbjct: 1744 EARSTSSLQFEIVDGN--KDDTFFVNPSTGIIVIKNELDYEKRKFY 1787
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 74/181 (40%), Gaps = 26/181 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y R+ + + V ATD D G G VEY L + ++ +F +D + +Q
Sbjct: 992 YTVKIREDVPIWTVVAVVDATDPDEGAGGDVEY-FLSDAMESEGFFKVDKVSGTIRTVQS 1050
Query: 79 -------------------EGGLSSTATVNIRVTDINDK--NPEFQSLPYEFSVPEGQD- 116
E LSS V I V D+N+ P F SV E Q
Sbjct: 1051 LDFEERQVHTLTVVARDRGEPSLSSETMVIIEVVDVNENLHAPVFDDFVVSASVFENQPI 1110
Query: 117 GLAVGRVHATDADE-GQNAVVYYSVP--EDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
G V V A DAD G ++ + Y++ + I + G+I+T ALD E ++ Y V
Sbjct: 1111 GTLVTTVRAKDADPLGGDSRIGYTIRGGDGIGIFSIDDEGNIKTKAALDVESKRGYWLTV 1170
Query: 174 F 174
+
Sbjct: 1171 Y 1171
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 11/94 (11%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPE------ 142
+ V DIND PEF Y + E + G + ++HATD DE + V+YS+
Sbjct: 1498 VTVIDINDHRPEFTEHTYRVDISENVEKGEVILQLHATDEDEDKK--VFYSLHAAQNQAS 1555
Query: 143 -DIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
+I F VD+ TG + N+ LD E + ++ V +
Sbjct: 1556 LEI-FHVDSVTGAVTLNEVLDRETIEEHVLTVMV 1588
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 70/167 (41%), Gaps = 26/167 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLDPAT---------------E 71
E G ++Q+ ATD+D K V Y L N + F++D T E
Sbjct: 1524 EKGEVILQLHATDEDEDK--KVFYSLHAAQNQASLEIFHVDSVTGAVTLNEVLDRETIEE 1581
Query: 72 H--QGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
H ++D+G + A V + V D ND PEF S + V E G AV +V A
Sbjct: 1582 HVLTVMVKDQGTPAKRNYARVIVTVHDHNDHAPEFISEIIQGKVFETSPVGAAVVQVWAI 1641
Query: 127 DADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYL 170
D D G NA + YS+ F +D G IR + LD Y+
Sbjct: 1642 DRDRGDNAKITYSITSGNVGNMFSIDPELGVIRVARELDLSISSEYI 1688
Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 69/173 (39%), Gaps = 22/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------- 67
YG + + E G +++++ A D D G G V Y + + A+ F +D
Sbjct: 2865 YGIILAENIEEGTSILKIIAHDDDLGSNGEVRYSFGTDIGELANVFTVDAYTGWISTLVQ 2924
Query: 68 ------PATEHQGPIQDEGGLSSTA--TVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
P + Q D G A +V++++ D ND P F YE +V E G
Sbjct: 2925 LDKEKQPEYKFQVVATDNGNPKHFARTSVHVKLKDYNDNPPAFVDDRYEAAVNEDALPGT 2984
Query: 119 AVGRVHATDADEGQNAVV--YYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V ++ D D N + Y + + +TG++ KALD E Y
Sbjct: 2985 VVVKLITVDKDSDVNTPIEFYITSGDSRSQFQIRSTGEVYVAKALDRETVDRY 3037
>gi|54013440|dbj|BAD60809.1| protocadherin2-gamma-v5-sCP2 [Danio rerio]
Length = 832
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 18/146 (12%)
Query: 23 ARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------E 71
R+ G + V A D D G G V Y N + FN++ T E
Sbjct: 262 VRENSPAGTVMGTVSAADADEGVNGHVSYYFALANKEERELFNINSETGEVTLLAHLDYE 321
Query: 72 HQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVH 124
Q Q D+GGLS T + I VTD ND P Q + + ++ E G V ++
Sbjct: 322 SQNSYQLNINARDKGGLSDTCKIVIDVTDENDNPPTIQLMSFSNTIAENSPVGTTVAVIN 381
Query: 125 ATDADEGQNAVVYYSVPEDIPFVVDA 150
DAD G+N +V++S+ ++IPF +++
Sbjct: 382 VEDADSGKNGLVHFSINQNIPFKIES 407
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 79/163 (48%), Gaps = 26/163 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDN-----NTDAASYFNL--------DPATEHQGP 75
+G T+ + D DSGK GLV + + N + + Y++L + TE+
Sbjct: 373 VGTTVAVINVEDADSGKNGLVHFSINQNIPFKIESTFSEYYSLITDDMLDRETVTEYNIT 432
Query: 76 I--QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
I D+G S T+N++++D+ND P+F S Y+ V E G+ + V A DAD
Sbjct: 433 ILVSDQGSPARHSNKTLNVKISDVNDNPPKFGSDEYKTFVNENNSPGVTILTVKANDADW 492
Query: 131 GQNA-VVYYSVPEDIP-------FVVDANTGDIRTNKALDYEK 165
G NA + Y+ EDI VDA TG + K+ D+E+
Sbjct: 493 GPNAQLSYFLKDEDIRGAPLSSLVSVDALTGTVHAVKSFDFEQ 535
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 75/186 (40%), Gaps = 37/186 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + + GVT++ VKA D D G + Y L D + A +L G +
Sbjct: 468 YKTFVNENNSPGVTILTVKANDADWGPNAQLSYFLKDEDIRGAPLSSLVSVDALTGTVHA 527
Query: 78 ------------------DEGG---LSSTATVNIRVTDINDKNPEF-------QSLPYEF 109
+GG LSS T+ I + D ND P+ S+ E
Sbjct: 528 VKSFDFEQLKSFSFNVTARDGGSPPLSSEVTITINIQDQNDNAPQVLYPVQTGASVVAEI 587
Query: 110 SVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL---D 162
VP D G V +V A D D GQNA + Y + P+ F V G+IRT + + D
Sbjct: 588 -VPRAVDVGYLVTKVVAVDVDSGQNAWLSYKLQKAPDRALFEVGLQNGEIRTVRQVTDKD 646
Query: 163 YEKQQL 168
KQ+L
Sbjct: 647 AVKQKL 652
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 67/168 (39%), Gaps = 27/168 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYFNLDPATEHQGPIQDE 79
LG +A D D G G+ Y+L + + TD Y + E +DE
Sbjct: 159 LGARFPLDRAMDTDVGLNGIQSYKLHPTDNFKLEVHSLTDGNKYIEMILQRELDREERDE 218
Query: 80 GGL------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
L S T +++ + D ND P + ++ V E G +G V A
Sbjct: 219 IKLVLLATDGGSPQKSGTVKIHVTILDANDNAPVCKQSVFKTEVRENSPAGTVMGTVSAA 278
Query: 127 DADEGQNAVVYY-----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
DADEG N V Y + E F +++ TG++ LDYE Q Y
Sbjct: 279 DADEGVNGHVSYYFALANKEERELFNINSETGEVTLLAHLDYESQNSY 326
>gi|116283803|gb|AAH30897.1| Pcdha6 protein [Mus musculus]
Length = 926
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 19/147 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGG---LSSTATVN 89
+ V+ +D+ S LV + LD DA L + +GG L+ T +
Sbjct: 179 FLDVQTSDELSQSLFLVLGKSLDREEDAEVKLLL---------VATDGGKPELTGTVQIL 229
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPEDI---- 144
I+V D+ND P F Y+ + E +G V +++A+DADEG N+ + YS+ D+
Sbjct: 230 IKVLDVNDNEPTFPQSVYKVQLLENTANGTLVMKLNASDADEGSNSEIVYSLGSDVSSTT 289
Query: 145 --PFVVDANTGDIRTNKALDYEKQQLY 169
F +D N+G++RT LDYE++ Y
Sbjct: 290 RTKFQIDPNSGEVRTKGELDYEERTSY 316
Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 28/167 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVE--------YRLLDNNTDAASYFNLDPATEHQGP----- 75
LG + + +D+DSG G V ++L+ + S LD A + +
Sbjct: 365 LGAVIALISVSDRDSGVNGQVTCSLSPHVPFKLVSTFKNYYSLV-LDSALDREATADYKV 423
Query: 76 --IQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
+GG L +TA+V++ V D+ND P F Y V E G + V A DAD
Sbjct: 424 MVTARDGGSPSLRATASVSVEVADVNDNAPVFAQPEYTVFVKENNPPGAHIFTVSAMDAD 483
Query: 130 EGQNAVVYYSVPED-------IPFV-VDANTGDIRTNKALDYEKQQL 168
+NA+V YS+ E +V V A +G + + LD+E+ +L
Sbjct: 484 AQENALVSYSLVERRVGERLLSSYVSVHAESGKVFALQPLDHEELEL 530
Score = 42.4 bits (98), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 60/141 (42%), Gaps = 27/141 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLDPAT-----------------E 71
G +M++ A+D D G + Y L D ++ + F +DP + E
Sbjct: 258 GTLVMKLNASDADEGSNSEIVYSLGSDVSSTTRTKFQIDPNSGEVRTKGELDYEERTSYE 317
Query: 72 HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQ----SLPYEFSVPEGQDGLAVGRVHA 125
Q D+G +S +++++ DIND PE SLP + + P G + +
Sbjct: 318 IQVIASDKGTPAMSGHCKISVKLVDINDNTPEVSITSLSLPVQENAPLGA---VIALISV 374
Query: 126 TDADEGQNAVVYYSVPEDIPF 146
+D D G N V S+ +PF
Sbjct: 375 SDRDSGVNGQVTCSLSPHVPF 395
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 70/186 (37%), Gaps = 50/186 (26%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------------NTDAASYFN 65
Y ++ + G + V A D D+ + LV Y L++ + ++ F
Sbjct: 460 YTVFVKENNPPGAHIFTVSAMDADAQENALVSYSLVERRVGERLLSSYVSVHAESGKVFA 519
Query: 66 LDPA-------TEHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
L P + Q +D G L S T+ + V D ND P +P+G
Sbjct: 520 LQPLDHEELELLQFQVTARDAGVPALGSNVTLQVFVLDENDNAP--------LLLPQGAV 571
Query: 117 GLA----------------VGRVHATDADEGQNAVVYYSVPEDIP----FVVDANTGDIR 156
G+ V +V A DAD G NA + Y + + F V TG+I
Sbjct: 572 GVGGSVSELVPRSVGSGHVVTKVRAVDADSGYNAWLSYELQSTVGMRSLFRVGLYTGEIS 631
Query: 157 TNKALD 162
T +ALD
Sbjct: 632 TTRALD 637
>gi|47212432|emb|CAF94182.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3085
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 76/168 (45%), Gaps = 23/168 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL----------LDNN---TDAASYFN 65
Y A ++ +G ++QVKATD D G FG V Y +D N T A
Sbjct: 2546 YEAQVKENSVVGTRVVQVKATDSDPGVFGRVTYSFVNDVGRERFSIDANGQITTAEKLDR 2605
Query: 66 LDPATEH---QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVG 121
DP+ ++ QD GG S ATV + + D ND P F + Y SV +G +
Sbjct: 2606 EDPSNQYVVVSVAAQDAGGHVSYATVQVSLVDENDNAPHFWATEYRASVRSSVAEGFLLT 2665
Query: 122 RVHATDADEGQNAVVYYSVPED--IPFV----VDANTGDIRTNKALDY 163
+V A+D D G NA + YS+ D +P +D + G I T A +
Sbjct: 2666 QVQASDPDAGTNARITYSIYSDSHVPVTDILEIDPDNGWIVTKGAFGH 2713
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR--------VHATDADEG 131
G++S AT I++ D ND P FQ L Y S+ E +V + ATDAD
Sbjct: 1793 AGMASNATAIIQLKDENDNPPVFQQLRYHGSISEAAAVNSVVLNPDDSPLVIKATDADRN 1852
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERVFL 175
+NA++ Y + ED+ F VD+ TG IRT +LD+E ++ VF+
Sbjct: 1853 ENALLVYQIVEDVAKMFFAVDSGTGSIRTIASLDHETLAIFHFHVFV 1899
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 72/150 (48%), Gaps = 28/150 (18%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLD--NNTDAASYFNLDPAT---------EHQ---- 73
+G + V ATDKDS K ++ Y++ NNTD YF++D ++ +H+
Sbjct: 2348 IGTPALHVSATDKDSDKNNVIHYQIFSDHNNTD---YFHIDSSSGLILTARMLDHELVQK 2404
Query: 74 ---GPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHAT 126
I + G LSS +V + V+DIND P F L YE V E G V V A+
Sbjct: 2405 FDFVVIATDNGFPPLSSEVSVTVMVSDINDNPPVFNQLLYEAYVDELAPRGHFVTCVQAS 2464
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTG 153
DAD + YS+ E + F++D TG
Sbjct: 2465 DADSSDYEKLEYSILSGNEKLVFMLDKMTG 2494
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 72/173 (41%), Gaps = 24/173 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-------NNTDAASYF--NLDP- 68
Y + + +G ++QV ATD+D+G G V Y LL N+T Y LD
Sbjct: 822 YTVVLPENTAIGTDVIQVGATDRDAGPNGEVAYSLLTATANFGINSTSGVVYVAGQLDRE 881
Query: 69 -------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD---GL 118
E + + S T+ + + D+ND P F +P + +D G
Sbjct: 882 LVSVFYLKVEARDKAEQGSQRFSVTTLKVVLEDVNDCPPVF--IPSVYKTRALEDLPVGT 939
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
+ + D D G V YS+ D F VD +G IR K LDYE QQ Y
Sbjct: 940 VLAWLETQDPDLGPGGQVQYSLANDYNGWFEVDRTSGAIRLMKELDYETQQFY 992
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 77/169 (45%), Gaps = 21/169 (12%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--------------TDA 60
+ L Y A + G + V+A+D DS + +EY +L N T +
Sbjct: 2440 NQLLYEAYVDELAPRGHFVTCVQASDADSSDYEKLEYSILSGNEKLVFMLDKMTGIVTLS 2499
Query: 61 ASYFN-LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGL 118
+ Y ++PA + D G +STA V+I+V+ N P F+ YE V E G
Sbjct: 2500 SRYKQRMEPAYSLNISVSD-GVFTSTAQVHIKVSQGNLYAPVFEQNVYEAQVKENSVVGT 2558
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYE 164
V +V ATD+D G V YS D+ F +DAN G I T + LD E
Sbjct: 2559 RVVQVKATDSDPGVFGRVTYSFVNDVGRERFSIDAN-GQITTAEKLDRE 2606
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE-- 142
A V + + D ND P F YE V E G +V V A D D+G+N + YS+
Sbjct: 442 AQVQVAIQDANDNTPTFHQSSYEILVNESVPVGTSVLTVSAQDGDDGENGYITYSISSLG 501
Query: 143 DIPFVVDANTGDIRTNKALDYE 164
+PF ++ +G I T + LD++
Sbjct: 502 ALPFQINQFSGVITTTEPLDFD 523
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 26/171 (15%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LDPA 69
A ++ +G TL+QV A D D G+ G ++Y + D + N LD
Sbjct: 1036 ATVKENARIGTTLLQVAAQDDDVGRDGEIQYSIRDGSGLGRFAINEETGVIYTTDTLDRE 1095
Query: 70 TEHQGPI----QDEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
T+ + D G + AT+ ++V D+ND P Y+ SV E +G++V +
Sbjct: 1096 TKDSYWLTVYATDRGVVPQFATIAVFVQVEDVNDNAPLTSEAMYDSSVQENSPEGVSVVQ 1155
Query: 123 VHATDADE---GQNAVVYYSV---PEDIPFVVDANTGDI-RTNKALDYEKQ 166
+ A D DE + ++ V P+++ F ++++TG I T++ LD E+Q
Sbjct: 1156 IQAQDPDETPLTAEKLSFHIVSGNPQNL-FAINSHTGLITTTSRKLDREQQ 1205
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 75/169 (44%), Gaps = 29/169 (17%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
SL GAM + + GV +++ KD+G L + LD+ YF +
Sbjct: 2791 SLVNGAMEKYNQD-GVFVVE-----KDTGLIRL--NKPLDHELIKEYYFKATATVQ---- 2838
Query: 76 IQDEGGLSSTATVNI--RVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
+ L S A+V++ +V D ND PEF + +E +V EG + +V A DAD G
Sbjct: 2839 ---QAKLDSVASVDVQVKVLDRNDNKPEFVTESFEAAVMEGVPLATRILQVRALDADSGA 2895
Query: 133 NAVVYYSVPEDI-----------PFVVDANTGDIRTNKALDYEKQQLYL 170
N V YS+ I F +D+ +G I T LD+E Y+
Sbjct: 2896 NGQVRYSLGGLIQSESQQETLFNTFSIDSQSGWISTLTNLDHETSSSYV 2944
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNA-VVYYSVPEDIP 145
V ++V D+ND P F LPY +V + + G A+ RV A D D+G N V YY + +
Sbjct: 2116 VKVQVEDVNDNVPVFVGLPYYAAVQVDAEPGTAIFRVMAIDQDKGINGHVSYYLLDDHGH 2175
Query: 146 FVVDANTGDIRTNKALD 162
F ++ TG + KA +
Sbjct: 2176 FEINKLTGILSLKKAFE 2192
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
A V I V D+ND P F YE SV E G AV +V A D D+G+NA V YS+
Sbjct: 1596 ARVLIEVKDVNDHVPIFTRSTYEGSVCESSAVGSAVVQVSALDKDKGENADVQYSI 1651
Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ---DGLAVGRVHATDADEGQNAVVYYSV 140
S V +RV D ND P F Y+ + E + + RV A D D+G N+ + YS+
Sbjct: 1247 SVVWVTVRVLDDNDNKPIFPEKVYQVKLAERERRKKAEPIYRVFAYDGDQGPNSDLSYSI 1306
Query: 141 P---EDIPFVVDANTGDIRTNKAL 161
ED F +D T + + KA
Sbjct: 1307 ADGNEDAKFFIDPKTAVLSSRKAF 1330
Score = 38.9 bits (89), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 70/162 (43%), Gaps = 26/162 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-----ATEHQGPIQ------ 77
+G ++QV A DKD G+ V+Y + N + F+++P H +
Sbjct: 1627 VGSAVVQVSALDKDKGENADVQYSIESGN--KGNTFHIEPILGIITISHDLNLSSIGHYV 1684
Query: 78 ------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDAD 129
D+G LS+T V+I VT ++ P+F Y + E +AVG T +
Sbjct: 1685 LTVRATDKGSPPLSTTTMVHISVTLSDNAAPKFPQEEYLAVITEN---VAVGTSIITVSA 1741
Query: 130 EGQNAVVY--YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Q + Y D F ++ +G I T KALDYEK Y
Sbjct: 1742 VSQTTLTYDIKQGDADGVFQINQYSGVITTRKALDYEKTASY 1783
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 18/155 (11%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE----HQGPIQDE------ 79
GV ++QVKATD D + Y L + +F ++P + Q +E
Sbjct: 1945 GVEVLQVKATDPDEDVSRNLTYSLTNG---VLEHFAIEPLSGTIVVKQSNFSNERFLFGV 2001
Query: 80 ----GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAV 135
G SSTA VN+ V + D F Y ++ E + G+ V ++ +
Sbjct: 2002 RVSDGQFSSTALVNVLVREALDSGLSFSQSLYSSTIQENESGITQVAVVNALGNQANEPI 2061
Query: 136 VYYSVPEDIPFVVDANTGDIRTNK-ALDYEKQQLY 169
VY + + F + +G I+T A D E+Q+ Y
Sbjct: 2062 VYTLLNGGMYFKIRPTSGVIQTTGVAFDREEQESY 2096
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 73/172 (42%), Gaps = 24/172 (13%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------- 70
R+ +G ++ QV A D D+G G + Y + D N D F +D T
Sbjct: 721 REDLGVGSSVFQVSAYDGDTGFNGQILYSISDGNPDDC--FTMDTDTGLISVLLPLDREK 778
Query: 71 -EH---QGPIQDEGGLSSTAT--VNIRVTDINDKNPEF-QSLPYEFSVPEGQD-GLAVGR 122
+H I D G +A + + + D ND P+F Q Y +PE G V +
Sbjct: 779 KDHYLLNLTIYDLGRPPKSAWHLLTVFIEDANDNAPQFLQEGGYTVVLPENTAIGTDVIQ 838
Query: 123 VHATDADEGQNAVVYYS-VPEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V ATD D G N V YS + F +++ +G + LD E ++ +V
Sbjct: 839 VGATDRDAGPNGEVAYSLLTATANFGINSTSGVVYVAGQLDRELVSVFYLKV 890
Score = 36.6 bits (83), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 71/173 (41%), Gaps = 28/173 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
+Y A+ D E G + +V A D+D G G V Y LLD++ +F ++ T
Sbjct: 2135 YYAAVQVDA-EPGTAIFRVMAIDQDKGINGHVSYYLLDDH----GHFEINKLTGILSLKK 2189
Query: 71 ---------EHQGPI--QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
E+Q I +D G + ++T +T +N P F Y SV E D
Sbjct: 2190 AFESDLSNVEYQMVIYARDHGSIPLSSTTEFPITVVNKAMPVFDKPFYSISVNE--DVAV 2247
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
V +A + + Y++ + P F + +TG I LD+E Y
Sbjct: 2248 HTPVLGINATSPKGQSIIYTIVDGDPSLQFDIGFDTGVIAVIHPLDHETAARY 2300
Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Query: 73 QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+ ++ + L + V+++V D+ND P F Y ++ E ++ +V ATDAD G
Sbjct: 118 KASVKGDALLETWTKVSVQVLDMNDLRPLFSPTTYSVTIMESTPLRTSIAQVTATDADIG 177
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQ 166
N YY + + F V +G + + L+ +++
Sbjct: 178 SNGEFYYFLKNKMDLFAVHPTSGVVLLSGKLNVDER 213
>gi|403285083|ref|XP_003933869.1| PREDICTED: protocadherin Fat 1 [Saimiri boliviensis boliviensis]
Length = 4589
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 76/160 (47%), Gaps = 23/160 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQDE------- 79
G +MQV ATD D + Y LL + A F L+P T + P+ E
Sbjct: 3039 GKLIMQVSATDADIRSNAEITYTLLGS---GAEKFKLNPDTGELKTSAPLDREEQAVYHL 3095
Query: 80 -------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
GG A++ + + D+ND PEF + PY +V E + G + RV ATDAD G
Sbjct: 3096 LVRATDGGGRFCEASIVLTLEDVNDNAPEFSADPYAITVFENTEPGTLLTRVQATDADAG 3155
Query: 132 QNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
N + YS+ + D F ++ +G I+ K LD E Q +Y
Sbjct: 3156 LNRKISYSLIDSADGQFSINELSGIIQLEKPLDRELQAVY 3195
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDPATEHQGPI-- 76
L + +VK D DSG +G V Y ++++ Y N LD T + I
Sbjct: 2507 LHTLVTEVKTVDGDSGIYGRVTYHIVNDFAKDRFYINERGQIFTLEKLDRETPAEKVISV 2566
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEG 131
+D GG + TVN+ +TD ND P+F++ YE ++ G G +V +V A+DADEG
Sbjct: 2567 RLMAKDAGGKVAFCTVNVILTDDNDNAPQFRATRYEVNIGSGAAKGTSVIKVLASDADEG 2626
Query: 132 QNAVVYYSVPED 143
NA V Y++ D
Sbjct: 2627 SNADVTYAIESD 2638
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 21/172 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN------NTDAASYFNLDPATE 71
++ ++ DK E+ ++QV+ATDKD G G V Y +L + ++ A L P
Sbjct: 827 YFVEVSEDK-EVHSEIIQVEATDKDLGPNGRVTYSVLTDTDMFSIDSTAGVVKILQPLDR 885
Query: 72 HQGPI-----------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLA 119
P+ ++E L ST + + + D+ND P+F Y V E +G
Sbjct: 886 EVQPVHYLKIEARDQAREEPQLFSTVVLKVSLEDVNDNPPKFIPPNYRVKVREDLPEGTV 945
Query: 120 VGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
+ + A D D GQ+ V YS+ + + F VD +G +R + LD+EK+Q+Y
Sbjct: 946 IMWLEAYDPDLGQSGQVRYSLVDHGEGNFDVDKLSGAVRIVQQLDFEKKQVY 997
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 69/142 (48%), Gaps = 16/142 (11%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFN-LDPATEHQGPIQDEGGLSSTATVNIRVTDINDK 98
D+ SG+ L + LD+ T F+ L TE ++ + S+ V+I+V D ND
Sbjct: 2754 DRQSGRLKL--EKSLDHETTKWHQFSILARCTE------EDYEMVSSVEVSIQVKDANDN 2805
Query: 99 NPEFQSLPYE-FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI------PFVVDAN 151
+P F+S PYE F V G V ++ A+D D G N V Y + + F V
Sbjct: 2806 SPVFESSPYEAFIVENLPAGSRVIQIRASDVDSGANGQVVYRLDQSQSTEVIESFAVHTE 2865
Query: 152 TGDIRTNKALDYEKQQLYLERV 173
TG I T K LD+EK+ Y +V
Sbjct: 2866 TGWITTLKELDHEKRGNYQIKV 2887
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 77/169 (45%), Gaps = 25/169 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--------TDAASYF---NLD 67
YGA + +G ++QV A +D + Y ++ N + + F NLD
Sbjct: 3235 YGATVSEDILVGTEVLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLD 3294
Query: 68 PATEHQGPIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--- 118
+ H+ + E GG LS ATV+I VTDIND P F Y + E D +
Sbjct: 3295 YESSHEYYLTVEATDGGTPSLSDVATVSINVTDINDNTPVFSQDTYTAVISE--DAVLEQ 3352
Query: 119 AVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYE 164
+V V A DAD N+ ++YS+ + F +D GD++ K LD E
Sbjct: 3353 SVITVMADDADGPLNSHIHYSIIDGNRGSSFTIDPVRGDVKVTKVLDRE 3401
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 23/158 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV+ATD DS + Y++ N + + +F++D +T
Sbjct: 2288 YAATLSEASVIGTSVVQVRATDSDSEPNRGISYQMFGNLSKSQDHFHIDSSTGLISLLRT 2347
Query: 71 -------EHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
+H ++ +GG LSS V + VTD+ND P F+ YE + E G
Sbjct: 2348 LDYERSRQHTILVRAVDGGMPPLSSEVIVTVDVTDLNDNLPLFEQQIYEARISEHAPHGH 2407
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTG 153
V V A DAD + YS+ + FV+D TG
Sbjct: 2408 FVTCVKAYDADSSDVGKLQYSILSGNDHKHFVIDGATG 2445
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVY 137
+G SS A V ++V D ND +P + Y ++PE G + +V ATDAD NA +
Sbjct: 3000 DGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPEDTLPGKLIMQVSATDADIRSNAEIT 3059
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ F ++ +TG+++T+ LD E+Q +Y
Sbjct: 3060 YTLLGSGAEKFKLNPDTGELKTSAPLDREEQAVY 3093
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE 142
++ V ++V N PEF Y+ + E G V + A D DEG+N V YS+
Sbjct: 445 ASTKVLVKVLGANSNPPEFTQTAYKAAFDENVPIGTTVMSLSAVDPDEGENGYVTYSIAN 504
Query: 143 --DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSY 183
+PFV+D TG + T++ LDYE + RV+ + A+ +
Sbjct: 505 VNHVPFVIDHFTGAVSTSENLDYE----LMPRVYTLRIRASDW 543
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 34/178 (19%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-- 70
TS+ ++Y + + + V+++Q++A D DS + YR+ N +F++ P T
Sbjct: 1139 TSEPVYYPEIMENSPK-DVSVVQIEAFDPDSSSDDKLTYRITSGNPQG--FFSIHPKTGL 1195
Query: 71 --------------EH--QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH + + D G S+ A + +++ D ND P+F Y+ +P
Sbjct: 1196 ITTTSRKLDREQQDEHILEVTVTDNGSPPKSTIARIIVKILDENDNKPQFLQKFYKIRLP 1255
Query: 113 EGQD--------GLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNK 159
E + V RV ATD DEG NA + YS+ E F ++ TG + + K
Sbjct: 1256 EREKPDRERNARREPVYRVIATDRDEGPNAEISYSIEDGNEHGRFFIEPKTGVVSSKK 1313
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 76 IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNA 134
++ + + V ++V D ND P F Y S+PE +V RV ATDAD G N
Sbjct: 123 VEKNTNVEARTKVRVQVLDTNDLRPLFSPTSYSVSLPENTAIRTSVARVSATDADIGTNG 182
Query: 135 VVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
YYS + F + ++G + LD+ + +LY + + +
Sbjct: 183 EFYYSFKDRTDMFAIHPSSGVVVLTGRLDFLETRLYEMEILAVDR 227
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 19/173 (10%)
Query: 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQGPIQD 78
G ++ +G +++ + ATD D+G G + Y + N D+ +++ + P+
Sbjct: 723 GIRVKENQPVGSSVILMNATDLDTGFNGKLVYAVSGGNEDSCFIIDMETGMLKILSPLDR 782
Query: 79 EG-------------GLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VG 121
E G+ A +++ V D ND PEF Y V E ++ + +
Sbjct: 783 ETTDKYTLNITVYDLGIPQKAAWRLLDVVVIDANDNPPEFLQESYFVEVSEDKEVHSEII 842
Query: 122 RVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLERV 173
+V ATD D G N V YSV D F +D+ G ++ + LD E Q ++ ++
Sbjct: 843 QVEATDKDLGPNGRVTYSVLTDTDMFSIDSTAGVVKILQPLDREVQPVHYLKI 895
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 72/174 (41%), Gaps = 25/174 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y + E G L +V+ATD D+G + Y L+D+ S L + + P+
Sbjct: 3130 YAITVFENTEPGTLLTRVQATDADAGLNRKISYSLIDSADGQFSINELSGIIQLEKPLDR 3189
Query: 79 EGGLSSTATVNIRVT-------------------DINDKNPEFQSLPYEFSVPEG-QDGL 118
E L + T++++ DIND P F+ Y +V E G
Sbjct: 3190 E--LQAVYTLSLKAVDHGLPRRLTTTGTVVVSVLDINDNPPVFEYREYGATVSEDILVGT 3247
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V +V+A D NA + YS+ E F +D+ TG + + LDYE Y
Sbjct: 3248 EVLQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDYESSHEY 3301
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 77/178 (43%), Gaps = 34/178 (19%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE--HQ 73
+L Y A+ + E+G + V A D+DSGK G V Y L +++ +F + P E +
Sbjct: 2083 NLPYYAVVKVDAEVGHIIRYVTAVDRDSGKNGEVHYYLKEHH----EHFQIGPLGEISLK 2138
Query: 74 GPIQ---------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
P + D G + +A V + +T +N P F+ Y +PE
Sbjct: 2139 KPFELDTLNKEYLVTVVAKDGGNPAFSAEVIVPITVMNKAMPVFEKPFYSAEIPENI--- 2195
Query: 119 AVGRVHA----TDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+VH+ A+ + V+YS+ + P F V+ NTG + LD+E Y
Sbjct: 2196 ---QVHSPVVHVQANSPEGLKVFYSIADGDPFSQFTVNFNTGVVSVVAPLDFEAHPAY 2250
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 32/175 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + +G ++QV A DKD GK V Y + N + F +DP G I+
Sbjct: 1567 YKGRVYESAAIGSVVLQVTALDKDKGKNAEVLYSIESGNI--GNSFMIDPVL---GSIKT 1621
Query: 78 -------------------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
D+G +S +V+I VT ++ +P+F S E+SV E +
Sbjct: 1622 AKELDRNNQVEYDLMVKATDKGSPPMSEITSVHIFVTIADNASPKFTS--KEYSV-EMSE 1678
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
+++G Q++VVY +I F ++ ++G I T +ALD+E +Y
Sbjct: 1679 TVSIGSFVGMVTAHSQSSVVYEIKDGNIGEAFDINPHSGSIITQRALDFETLPIY 1733
Score = 42.4 bits (98), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR--------VHATDADEG 131
GLS+ TV + + D ND +P F Y + E +V + A DAD+
Sbjct: 1743 AGLSANTTVVVHLQDENDNSPVFVQAEYTGLISESASVNSVVLTDRNVPLVIGAADADKD 1802
Query: 132 QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
NA++ Y + E F +D++T I T ++LDYE+ ++
Sbjct: 1803 SNALLVYHIVEPAMHSYFAIDSSTAAIHTVRSLDYEETSIF 1843
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G + V+I V DIND P F Y ++ E G +V +V ATD+D N + Y
Sbjct: 2262 GAHAEVFVDIIVEDINDNPPVFAQQSYAATLSEASVIGTSVVQVRATDSDSEPNRGISYQ 2321
Query: 140 VPEDIP-----FVVDANTGDIRTNKALDYEKQQLY 169
+ ++ F +D++TG I + LDYE+ + +
Sbjct: 2322 MFGNLSKSQDHFHIDSSTGLISLLRTLDYERSRQH 2356
Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVY 137
+G + V I+V D ND P+F + YE +PE + ++ ATD DE +N ++Y
Sbjct: 1433 DGTTTILTQVFIKVIDTNDHRPQFSTSKYEVVIPEDTVPETEILQISATDQDE-KNKLIY 1491
Query: 138 YSVPEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERVFL 175
P F +D TG + T++ LD+E ++ V +
Sbjct: 1492 TLQSSTDPLSLKKFRLDPATGSLYTSEKLDHEAIHQHVLTVMV 1534
Score = 35.8 bits (81), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 30/171 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDN---------------------NTDAASYFNLD 67
+G +M V A D+D+G+ G + Y + D + ++ S++ L
Sbjct: 1049 VGSLVMTVAAQDEDAGRDGEIRYSIRDGSGVGVFRIGEETGVIETSDRLDRESTSHYWLT 1108
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
QG + LSS + I V D+ND P+ Y + E ++V ++ A
Sbjct: 1109 VFATDQGVVP----LSSFIEIYIEVEDVNDNAPQTSEPVYYPEIMENSPKDVSVVQIEAF 1164
Query: 127 DADEGQNAVVYYSVPEDIP---FVVDANTGDI-RTNKALDYEKQQLYLERV 173
D D + + Y + P F + TG I T++ LD E+Q ++ V
Sbjct: 1165 DPDSSSDDKLTYRITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILEV 1215
>gi|432915291|ref|XP_004079163.1| PREDICTED: uncharacterized protein LOC101164185 [Oryzias latipes]
Length = 1625
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 83/186 (44%), Gaps = 43/186 (23%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV ATD D +G +L+ YF++DP T
Sbjct: 593 YSATVPEMANIGTSIIQVTATDADDPTYG-NSAKLVYTLVQGQPYFSVDPQTGILRTAVP 651
Query: 71 EHQGPIQDE--------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
+ QD+ GGLS T TV +++TD+ND P F + FSV E
Sbjct: 652 DMDRETQDQYLVVLQAKDMGGQLGGLSGTTTVTVQLTDVNDNPPRFTQSIWSFSVSELAI 711
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD------------IRTNKALDY 163
G +GR+ A+DAD +NA + Y+ +++ +GD I NK +DY
Sbjct: 712 PGAEIGRISASDADLFENARMEYA-------ILEGESGDTFNITGLNHEAVIILNKGVDY 764
Query: 164 EKQQLY 169
E + Y
Sbjct: 765 ESRSSY 770
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 63/127 (49%), Gaps = 22/127 (17%)
Query: 50 EYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF 109
EYRL+ D + L+P+++ IRV DIND P F PY
Sbjct: 552 EYRLIATAIDRQTDRALEPSSQFL----------------IRVQDINDNPPVFDEGPYSA 595
Query: 110 SVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP-FVVDANTGDIRTNKA-LDY 163
+VPE + G ++ +V ATDAD+ G +A + Y++ + P F VD TG +RT +D
Sbjct: 596 TVPEMANIGTSIIQVTATDADDPTYGNSAKLVYTLVQGQPYFSVDPQTGILRTAVPDMDR 655
Query: 164 EKQQLYL 170
E Q YL
Sbjct: 656 ETQDQYL 662
>gi|74184732|dbj|BAE27968.1| unnamed protein product [Mus musculus]
Length = 801
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 72/174 (41%), Gaps = 26/174 (14%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG 74
D +FY + LG L+ A D DSG G V Y + D F ++ EH G
Sbjct: 243 DHMFYEVTVPENSMLGSLLITASAWDLDSGINGEVSYAFSHASEDIRKTFAIN---EHSG 299
Query: 75 PIQ--------------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
I+ D GGL +TV I+V D+ND PE + +PE
Sbjct: 300 EIRLKGYLDFETTESYSIIIKATDRGGLFGKSTVRIQVMDVNDNFPEIIVSSFISPIPEN 359
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDA---NTGDIRTNKALDYEK 165
V D D G+N + ++PE +PFV+ + N + T+ ALD E
Sbjct: 360 TAETLVMIFSIRDKDSGENGKMVCTIPEGLPFVLKSSIENYYHLETDGALDRES 413
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS-- 139
S TA V + V DIND +PEF + YE +VPE G + A D D G N V Y+
Sbjct: 223 SGTALVRVEVIDINDNSPEFDHMFYEVTVPENSMLGSLLITASAWDLDSGINGEVSYAFS 282
Query: 140 -VPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
EDI F ++ ++G+IR LD+E + Y
Sbjct: 283 HASEDIRKTFAINEHSGEIRLKGYLDFETTESY 315
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L++ T+ ++V DIND P F Y E L +G + ATD+D G NA + YS+
Sbjct: 431 LTTQHTIIVQVADINDNAPTFTQTSYTMFFHENNSPALHIGTISATDSDAGSNAHITYSL 490
Query: 141 --PEDIPFV------VDANTGDIRTNKALDYEKQQLY 169
+D+ ++A+ G + +ALDYE Q +
Sbjct: 491 MSAQDLQMALSSLISINADNGQLFALRALDYEVLQAF 527
Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 68/170 (40%), Gaps = 35/170 (20%)
Query: 36 VKATDKDSGKFGLVEYRLLDN-------------NTDAASYFNLDP-------ATEHQGP 75
+ ATD D+G + Y L+ N D F L A E Q
Sbjct: 473 ISATDSDAGSNAHITYSLMSAQDLQMALSSLISINADNGQLFALRALDYEVLQAFEFQVG 532
Query: 76 IQDEG--GLSSTATVNIRVTDINDKNP------EFQSLPYEFSVPEGQD-GLAVGRVHAT 126
D G LSS A V + V D ND P + S P +P + G V +V A
Sbjct: 533 ATDRGSPALSSQALVRVVVLDDNDNAPFVLYPMQNASAPCTELLPRAAEPGYLVTKVVAV 592
Query: 127 DADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL---DYEKQQLYL 170
D D GQNA + + + E F V A+ G++RT + L D K +L L
Sbjct: 593 DRDSGQNAWLSFQLLKATEPGLFSVWAHNGEVRTTRLLSERDAPKHRLLL 642
Score = 38.9 bits (89), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVH-ATDADEGQNAVVYYSVPEDIPFVV 148
++VTD+ND +P F +PE AV + A D D G NAV Y + ++ F V
Sbjct: 121 LQVTDVNDNSPVFLEKEMVLEIPENSPVGAVFLLESAIDLDVGINAVKSYEISQNSHFHV 180
Query: 149 DANTG-------DIRTNKALDYEKQQ 167
++ +KALDYE+Q
Sbjct: 181 TMRVNPDGRKYPELVLDKALDYEEQH 206
>gi|405968293|gb|EKC33375.1| Neural-cadherin [Crassostrea gigas]
Length = 2658
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 78/165 (47%), Gaps = 28/165 (16%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNN----TDAASYFNLDPAT------------- 70
E G +M V+A D D G+ G V Y L +N S F +D T
Sbjct: 1231 EKGKIVMTVRAVDYDLGENGTVYYTLGNNRPADPQTGDSLFVIDGKTGLVISNTRTLDRE 1290
Query: 71 ---EHQGPI-QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRV 123
++ P+ +GG LSSTAT+ I+VTD ND+ P F Y ++PE Q + V
Sbjct: 1291 KVDQYLLPVVATDGGKVPLSSTATLTIQVTDKNDERPRFNKKIYRATLPESQKSGLIITV 1350
Query: 124 HATDADEGQNAVVYYSVPEDIPFV----VDANTGDIRTNKALDYE 164
ATD D G N+ + YS+ D+ F + +N G + K +DYE
Sbjct: 1351 AATDDDIGNNSKIAYSLKSDLNFFSISSLPSNKGALNVYKPVDYE 1395
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 75/175 (42%), Gaps = 37/175 (21%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE----HQGPIQD------- 78
G+ L+QV ATDKD+ + Y L NT+ F ++ T H+ +D
Sbjct: 1125 GLFLIQVSATDKDTSRQTFFRYSL---NTEYGDTFQINSRTGVITLHKSLDRDLPYGHAE 1181
Query: 79 -------------EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHA 125
EG L A V ++ DINDK PEF F + G V V A
Sbjct: 1182 YQFNVLVVDEPGTEGALVGYAYVKVKPQDINDKTPEFTQALTGFVPENSEKGKIVMTVRA 1241
Query: 126 TDADEGQNAVVYYSVPEDIP---------FVVDANTGDIRTN-KALDYEKQQLYL 170
D D G+N VYY++ + P FV+D TG + +N + LD EK YL
Sbjct: 1242 VDYDLGENGTVYYTLGNNRPADPQTGDSLFVIDGKTGLVISNTRTLDREKVDQYL 1296
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LSS++ V I + DIN+ NP F S Y SV E Q G V V ATD D G+N + YSV
Sbjct: 529 LSSSSFVIIMIMDINNNNPTFPSCTYAPSVLENQPPGTRVVDVTATDPDRGENGKITYSV 588
Query: 141 ----PEDIPFVVDANTGDIRTNKALDYEKQ 166
++ F V+A G + T K D E +
Sbjct: 589 VTPNNQEQNFQVNAENGTVYTKKMFDRESE 618
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 13/101 (12%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSL------PYEFSVPEGQD-GLAVGRVHATDAD--EGQ 132
LS+ + ++V D+N+K P+F+ L Y SVPE +D G +V V A D D E
Sbjct: 859 LSNEIRITVKVLDMNNKQPQFEGLDPTLSNSYRGSVPENEDAGQSVITVKAVDPDLQEPN 918
Query: 133 NAVVYYSVPEDI----PFVVDANTGDIRTNKALDYEKQQLY 169
N V Y VP+ F +D G I TN D E ++Y
Sbjct: 919 NVVSYSLVPDKYGAYQKFQIDPQRGLISTNYTFDRETLKVY 959
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 77/166 (46%), Gaps = 32/166 (19%)
Query: 30 GVTLM-QVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE-------------HQGP 75
G TL+ Q KA S K G+V+Y+L D++ +S F+++ E H
Sbjct: 238 GTTLIVQAKAFQSKSEK-GVVDYQLTDSSGYISSVFSINSDGEIEALQSLDYETSPHSYS 296
Query: 76 IQDEG-----GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ--DGLAVGRVHATDA 128
++ G GLSS + + + + D ND P F+ Y EG + L V ATD
Sbjct: 297 LKLVGTEKSTGLSSASQLIVYLEDDNDNAPVFELSTYTNVTSEGTLVNSLLFS-VTATDK 355
Query: 129 DEGQNAVVYYSVPEDIPFVVDAN--------TGDIRTNKALDYEKQ 166
D G NA + Y+V +D FV++ GD+R K LDY+ +
Sbjct: 356 DSGSNAELTYTVSDD-NFVIETRRDNITGKYIGDLRVAKKLDYDSR 400
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPY-------EFSVPEGQDGLAVGRVHATDADE 130
++G S+ V IRV DIND PEF Y E+ P G GL + +V ATD D
Sbjct: 1081 NDGYHSNYTEVKIRVRDINDNTPEFSQSEYIVTSIVEEYQPPPG--GLFLIQVSATDKDT 1138
Query: 131 GQNAVVYYSVPEDI--PFVVDANTGDIRTNKALD 162
+ YS+ + F +++ TG I +K+LD
Sbjct: 1139 SRQTFFRYSLNTEYGDTFQINSRTGVITLHKSLD 1172
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 76/185 (41%), Gaps = 27/185 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASYFNLDPATEHQG 74
S Y + G ++ V ATD D G+ G + Y ++ NN + N + T +
Sbjct: 551 SCTYAPSVLENQPPGTRVVDVTATDPDRGENGKITYSVVTPNNQEQNFQVNAENGTVYTK 610
Query: 75 PIQD---EGG------------------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
+ D E G L++ T +++ D+ND +P F + Y +V
Sbjct: 611 KMFDRESEAGLRGYSVTIKAEDHGESQQLNTLCTFWVKIKDLNDNSPLFDTESYMQTVLR 670
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYL 170
+ V A D D+ NA V YS+ ++ F VD +TG + K+L Y
Sbjct: 671 STSVNKRIMGVLAVDKDKEINAEVQYSLVDNPGEYFRVDTDTGGLYLQKSLSTVPH--YQ 728
Query: 171 ERVFL 175
E++ L
Sbjct: 729 EKIML 733
>gi|109506460|ref|XP_001054930.1| PREDICTED: protocadherin beta-1 [Rattus norvegicus]
gi|109507165|ref|XP_001064318.1| PREDICTED: protocadherin beta-1 [Rattus norvegicus]
Length = 818
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 74/173 (42%), Gaps = 37/173 (21%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP------------- 75
LG A D D G GL Y L A +YF+L GP
Sbjct: 148 LGSRFPLQSAQDLDVGLNGLQNYTL-----SANTYFHLHTRFRSHGPKYAELVLDNPLDR 202
Query: 76 -IQDEGGLSSTA----------TVNIRVT--DINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
Q E L+ TA T NIRV D+ND P+F L Y VPE D G V
Sbjct: 203 EAQPEVNLTITAVDGGSPPKSGTANIRVVVLDVNDHVPQFSRLVYRAQVPENSDNGSLVV 262
Query: 122 RVHATDADEGQNAVVYYSV---PEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
V ATD DEG N + YS+ PE + F+VD TG++R LD+E + Y
Sbjct: 263 VVTATDLDEGTNKQITYSLAENPEAVLRTFLVDPQTGEVRLRGPLDFETIETY 315
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 72/141 (51%), Gaps = 17/141 (12%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDI 95
VK T ++S + LV R+LD + S +N+ GP LS+ + + ++DI
Sbjct: 394 VKHTFRNS--YSLVTDRILDR--EDVSNYNITLVAMDTGP----PSLSTETVIEVVISDI 445
Query: 96 NDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV--PE--DIPFV--- 147
ND +P FQ Y +V E + +G+VHA D D G+NA V YS+ P+ D+
Sbjct: 446 NDNSPVFQEDSYVLTVRENNSPAVFIGKVHAEDLDLGENAQVTYSLLPPKSGDLSVFAYI 505
Query: 148 -VDANTGDIRTNKALDYEKQQ 167
++++ G + + +DYE Q
Sbjct: 506 SINSDNGKLYALRTMDYEAIQ 526
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 72/173 (41%), Gaps = 29/173 (16%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQ 73
L Y A + + G ++ V ATD D G + Y L +N F +DP T +
Sbjct: 245 LVYRAQVPENSDNGSLVVVVTATDLDEGTNKQITYSLAENPEAVLRTFLVDPQTGEVRLR 304
Query: 74 GPI--------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG-- 117
GP+ D GGLS+ + V + V D+ND PE S P +D
Sbjct: 305 GPLDFETIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVTI--SSVSSPLAEDSPL 362
Query: 118 ---LAVGRVHATDADEGQNAVVYYSVPEDIPFVVD---ANTGDIRTNKALDYE 164
+A+ + D G + + ED+PFVV N+ + T++ LD E
Sbjct: 363 QTVVALFTIRDRDVRVGGKITCF--LKEDLPFVVKHTFRNSYSLVTDRILDRE 413
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 76/190 (40%), Gaps = 33/190 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP--- 75
Y R+ + V + +V A D D G+ V Y LL + S F G
Sbjct: 457 YVLTVRENNSPAVFIGKVHAEDLDLGENAQVTYSLLPPKSGDLSVFAYISINSDNGKLYA 516
Query: 76 --------IQD--------EGG---LSSTATVNIRVTDINDKNP------EFQSLPYEFS 110
IQD +GG LSS TV + V D ND P + +LP
Sbjct: 517 LRTMDYEAIQDFQFVVKATDGGFLSLSSQVTVRVVVLDDNDNRPMILYPLQNGTLPCNDL 576
Query: 111 VPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQ 166
VP + G V +V A D D GQN+ + Y + + F V G+IRT + + E+
Sbjct: 577 VPRSAEAGYLVTKVVAVDGDSGQNSWLSYHLLKATDLGLFSVQRQNGEIRTLRQIS-ERD 635
Query: 167 QLYLERVFLI 176
+ + V L+
Sbjct: 636 PMMQKLVILV 645
>gi|443731650|gb|ELU16692.1| hypothetical protein CAPTEDRAFT_199156 [Capitella teleta]
Length = 2939
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI 144
T+ I +TD ND +P+F + + F+VPE + A+G++ A D D G N VV Y + +++
Sbjct: 1745 CTMIINITDTNDCSPKFVNNTWTFTVPENEAVNTAIGQIIAIDDDAGDNGVVLYRITDNV 1804
Query: 145 PFVVDANTGDIRTNKALDYEKQQLYLERV 173
PF +++ TGDI+T ++ + E Q ++ V
Sbjct: 1805 PFSIESVTGDIQTLQSFNAEDQSSFIFSV 1833
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ--DGLAVGRVHATDADEGQNAVVYY 138
G SS +NI + D+ND P FQ +PY + V EG ++G + ATD D+G + + Y
Sbjct: 2035 GHSSFCAINIELIDVNDNAPAFQGIPYNWDVLEGNYSTWHSIGFIQATDRDQGTSLGLRY 2094
Query: 139 SV--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
+ P++ F ++ +G I +++ +LE ++S
Sbjct: 2095 LLDQPDNTMFRIEEYSGQILIRGMVEWSLGMSFLEINAMVS 2135
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDG-----LAVGRVHATDADEGQNAVV 136
S T+TV + + D+ND P F Y V E Q G + G VHATDAD G N +
Sbjct: 1528 SITSTVKVEILDLNDNAPVFSESHYYAIVEENSQPGKTYLYMLNGNVHATDADVGANGKL 1587
Query: 137 YYSVPED--IPFVVDANTGDIRTNKALDYEKQQLY 169
YS+ + F +D +T D++ LD E+Q Y
Sbjct: 1588 TYSIHGNGSALFEIDEDTADVQVIGRLDREEQDRY 1622
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 70/180 (38%), Gaps = 32/180 (17%)
Query: 19 YGAMARDKHELGVTLM-----QVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQ 73
Y A+ + + G T + V ATD D G G + Y + N ++ F +D T
Sbjct: 1552 YYAIVEENSQPGKTYLYMLNGNVHATDADVGANGKLTYSIHGN---GSALFEIDEDTADV 1608
Query: 74 GPI-------QDE--------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
I QD G LS+T+ + I + D ND P F E S+P
Sbjct: 1609 QVIGRLDREEQDRYDLMVVARDLSGAPGALSATSILTIHIKDTNDMRPVFVESNVEVSIP 1668
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
E G V + D D N + + + D+ F V+ TG++ T LD E Y
Sbjct: 1669 EDLPVGSFVVALVTDDEDLVPNKITQFELVADLGNGFTVNKITGEVFTLGELDRETTGQY 1728
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHAT-DADEGQNAV 135
+D G ST + I + D+ND +P F PY F EG L++ V D DE +N
Sbjct: 1205 EDTAGHKSTIDLTIWIEDLNDNDPYFVGEPYIFYTLEGNASLSLQMVITVGDQDESRNGT 1264
Query: 136 VYYSV----PEDIPFVVDAN----TGDIRTNKALDYEKQQLYLE 171
S+ + F V + G I+ ALD+E+ L ++
Sbjct: 1265 TKLSMEGSNADIFHFEVSIDEHRSVGMIQPKLALDHEEPSLEID 1308
Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNA 134
V I VTD ND PEF S F VP E G VG + D D G N+
Sbjct: 2437 VIINVTDTNDNPPEFLSSTLVFGVPTEAHYGFLVGTLEVHDIDTGYNS 2484
>gi|14039478|gb|AAK53237.1|AF326312_1 protocadherin-betaS [Mus musculus]
Length = 801
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 72/173 (41%), Gaps = 26/173 (15%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG 74
D +FY + LG L+ A D DSG G V Y + D F ++ EH G
Sbjct: 243 DHMFYEVTVPENSMLGSLLITASAWDLDSGINGEVSYAFSHASEDIRKTFAIN---EHSG 299
Query: 75 PIQ--------------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
I+ D GGL +TV I+V D+ND PE + +PE
Sbjct: 300 EIRLKGYLDFETTESYSIIIKATDRGGLFGKSTVRIQVMDVNDNFPEIIVSSFISPIPEN 359
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDA---NTGDIRTNKALDYE 164
V D D G+N + ++PE +PFV+ + N + T+ ALD E
Sbjct: 360 TAETLVMIFSIRDKDSGENGKMVCTIPEGLPFVLKSSIENYYHLETDGALDRE 412
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS-- 139
S TA V + V DIND +PEF + YE +VPE G + A D D G N V Y+
Sbjct: 223 SGTALVRVEVIDINDNSPEFDHMFYEVTVPENSMLGSLLITASAWDLDSGINGEVSYAFS 282
Query: 140 -VPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
EDI F ++ ++G+IR LD+E + Y
Sbjct: 283 HASEDIRKTFAINEHSGEIRLKGYLDFETTESY 315
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L++ T+ ++V DIND P F Y E L +G + ATD+D G NA + YS+
Sbjct: 431 LTTQHTIIVQVADINDNAPAFTQTSYTMFFHENNSPALHIGTISATDSDAGSNAHITYSL 490
Query: 141 --PEDIPFV------VDANTGDIRTNKALDYEKQQLY 169
+D+ ++A+ G + +ALDYE Q +
Sbjct: 491 MSAQDLQMALSSLISINADNGQLFALRALDYEVLQAF 527
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 79/197 (40%), Gaps = 39/197 (19%)
Query: 9 ALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN------------ 56
A TS ++F+ + + + + + ATD D+G + Y L+
Sbjct: 450 AFTQTSYTMFF----HENNSPALHIGTISATDSDAGSNAHITYSLMSAQDLQMALSSLIS 505
Query: 57 -NTDAASYFNLDP-------ATEHQGPIQDEG--GLSSTATVNIRVTDINDKNP------ 100
N D F L A E Q D G LSS A V + V D ND P
Sbjct: 506 INADNGQLFALRALDYEVLQAFEFQVGATDRGSPALSSQALVRVVVLDDNDNAPFVLYPM 565
Query: 101 EFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIR 156
+ S P +P + G V +V A D D GQNA + + + E F V A+ G++R
Sbjct: 566 QNASAPCTELLPRAAEPGYLVTKVVAVDRDSGQNAWLSFQLLKATEPGLFSVWAHNGEVR 625
Query: 157 TNKAL---DYEKQQLYL 170
T + L D K +L L
Sbjct: 626 TTRLLSERDAPKHRLLL 642
Score = 39.3 bits (90), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVH-ATDADEGQNAVVYYSVPEDIPFVV 148
++VTD+ND +P F +PE AV + A D D G NAV Y + ++ F V
Sbjct: 121 LQVTDVNDNSPVFLEKEMVLEIPENSPVGAVFLLESAIDLDVGINAVKSYEISQNSHFHV 180
Query: 149 DANTG-------DIRTNKALDYEKQQ 167
++ +KALDYE+Q+
Sbjct: 181 TMRVNPDGRKYPELVLDKALDYEEQR 206
>gi|89363034|ref|NP_444374.2| protocadherin beta 19 precursor [Mus musculus]
gi|13876298|gb|AAK26069.1| protocadherin beta 19 [Mus musculus]
gi|74141278|dbj|BAE35943.1| unnamed protein product [Mus musculus]
gi|148678205|gb|EDL10152.1| mCG141286 [Mus musculus]
gi|187954771|gb|AAI41292.1| Protocadherin beta 19 [Mus musculus]
gi|187954935|gb|AAI41291.1| Protocadherin beta 19 [Mus musculus]
Length = 801
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 72/174 (41%), Gaps = 26/174 (14%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG 74
D +FY + LG L+ A D DSG G V Y + D F ++ EH G
Sbjct: 243 DHMFYEVTVPENSMLGSLLITASAWDLDSGINGEVSYAFSHASEDIRKTFAIN---EHSG 299
Query: 75 PIQ--------------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
I+ D GGL +TV I+V D+ND PE + +PE
Sbjct: 300 EIRLKGYLDFETTESYSIIIKATDRGGLFGKSTVRIQVMDVNDNFPEIIVSSFISPIPEN 359
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDA---NTGDIRTNKALDYEK 165
V D D G+N + ++PE +PFV+ + N + T+ ALD E
Sbjct: 360 TAETLVMIFSIRDKDSGENGKMVCTIPEGLPFVLKSSIENYYHLETDGALDRES 413
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS-- 139
S TA V + V DIND +PEF + YE +VPE G + A D D G N V Y+
Sbjct: 223 SGTALVRVEVIDINDNSPEFDHMFYEVTVPENSMLGSLLITASAWDLDSGINGEVSYAFS 282
Query: 140 -VPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
EDI F ++ ++G+IR LD+E + Y
Sbjct: 283 HASEDIRKTFAINEHSGEIRLKGYLDFETTESY 315
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L++ T+ ++V DIND P F Y E L +G + ATD+D G NA + YS+
Sbjct: 431 LTTQHTIIVQVADINDNAPAFTQTSYTMFFHENNSPALHIGTISATDSDAGSNAHITYSL 490
Query: 141 --PEDIPFV------VDANTGDIRTNKALDYEKQQLY 169
+D+ ++A+ G + +ALDYE Q +
Sbjct: 491 MSAQDLQMALSSLISINADNGQLFALRALDYEVLQAF 527
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 79/197 (40%), Gaps = 39/197 (19%)
Query: 9 ALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN------------ 56
A TS ++F+ + + + + + ATD D+G + Y L+
Sbjct: 450 AFTQTSYTMFF----HENNSPALHIGTISATDSDAGSNAHITYSLMSAQDLQMALSSLIS 505
Query: 57 -NTDAASYFNLDP-------ATEHQGPIQDEG--GLSSTATVNIRVTDINDKNP------ 100
N D F L A E Q D G LSS A V + V D ND P
Sbjct: 506 INADNGQLFALRALDYEVLQAFEFQVGATDRGSPALSSQALVRVVVLDDNDNAPFVLYPM 565
Query: 101 EFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIR 156
+ S P +P + G V +V A D D GQNA + + + E F V A+ G++R
Sbjct: 566 QNASAPCTELLPRAAEPGYLVTKVVAVDRDSGQNAWLSFQLLKATEPGLFSVWAHNGEVR 625
Query: 157 TNKAL---DYEKQQLYL 170
T + L D K +L L
Sbjct: 626 TTRLLSERDAPKHRLLL 642
Score = 38.9 bits (89), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVH-ATDADEGQNAVVYYSVPEDIPFVV 148
++VTD+ND +P F +PE AV + A D D G NAV Y + ++ F V
Sbjct: 121 LQVTDVNDNSPVFLEKEMVLEIPENSPVGAVFLLESAIDLDVGINAVKSYEISQNSHFHV 180
Query: 149 DANTG-------DIRTNKALDYEKQQ 167
++ +KALDYE+Q
Sbjct: 181 TMRVNPDGRKYPELVLDKALDYEEQH 206
>gi|386118331|gb|AFI99113.1| dachsous protocadherin [Clytia hemisphaerica]
Length = 3438
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 69/142 (48%), Gaps = 19/142 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG----PIQ 77
++ VKA DKD+ K V+Y L++ + D A +F +D E Q ++
Sbjct: 1867 VLNVKAVDKDTPKNAFVKYALVNPSRDVADHFEVDVEKGAIYLIKSLDYEQQRSYTFKVK 1926
Query: 78 DEGGLSST---ATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADE-GQN 133
EG + TV I+V D ND P F Y FS+PE + G +G V ATD D+ GQ
Sbjct: 1927 AEGKKVDSFDQTTVQIQVQDENDNKPVFTQSVYNFSLPEIKVGAVIGTVRATDRDQDGQQ 1986
Query: 134 AVVYYSVPEDIPFVVDANTGDI 155
V Y P D F ++ TG++
Sbjct: 1987 QVRYRFDPPDWNFQINPETGEV 2008
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 68/154 (44%), Gaps = 18/154 (11%)
Query: 33 LMQVKATDKDSGKFGLVEYRL--------LDNNTD---AASYFNLDPATEHQGPI----- 76
+++V ATD D G+FG V+Y+L ++ +T A F L P I
Sbjct: 2391 IIKVDATDPDQGEFGFVQYKLGTALDPFTIEQDTGKIYANKPFQLTPGIAKLTVIAYDSK 2450
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAV 135
+G SSTA V I V+ ++ NP F+ Y FS+ E DG+ +G V AT G
Sbjct: 2451 NGQGSRSSTALVEIHVSQLHQPNPYFKQSTYRFSIEEHTPDGVPIGHVEAT-VQNGYKEF 2509
Query: 136 VYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y + V G I T K LD E + Y
Sbjct: 2510 NYRIAEGNFGGVFTMEKGQITTYKNLDRETKAHY 2543
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 19/124 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYF-----------NLDPATEH----QGPIQ 77
++ + A+D D G G +RLL N D+ S+ +LD T+ + +Q
Sbjct: 997 ILTLNASDADVGNNGQFFFRLLPNE-DSKSFRMSRNGNLYVTKSLDRETKSTYSLKARVQ 1055
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNA 134
D G S A + I V D+ND++P+F+ L Y F V E Q G VG + A DAD G+N
Sbjct: 1056 DLGIPPQHSEAAITINVDDLNDESPKFERLHYNFEVSEELQPGTIVGEIIAVDADTGENG 1115
Query: 135 VVYY 138
Y
Sbjct: 1116 KFTY 1119
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 79/186 (42%), Gaps = 32/186 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKD--------------SGKFGLVEYRLLDNNTDAASYF 64
Y ++ +G L+QVKATD D SG+ R+ N TD
Sbjct: 2586 YHVTQKEDVTVGTKLLQVKATDADDPRQANGKLVYSIHSGQEATEWLRI--NETDGWIET 2643
Query: 65 NLDPATEHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
+ E IQ + G+ + ++N+ V D+ND P F F+V + ++
Sbjct: 2644 REELDRETTDTIQLTIRVADIEGAGMEAFTSLNVTVLDVNDNEPSFNYDLIRFNVIKIKE 2703
Query: 117 GL----AVGRVHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQL 168
+ V R ATD D G+N V Y + E D ++ ++ G + T ++LDYEK
Sbjct: 2704 NMPPHSVVFRAGATDKDIGENGRVSYRILESGGRDYFYMNESIPGWVYTKRSLDYEKNSS 2763
Query: 169 YLERVF 174
Y RV
Sbjct: 2764 YTLRVL 2769
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 67/150 (44%), Gaps = 21/150 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN------------LDPATEHQGPIQ--- 77
+ + ATDKD G+ G V YR+L++ Y N LD ++
Sbjct: 2711 VFRAGATDKDIGENGRVSYRILESGGRDYFYMNESIPGWVYTKRSLDYEKNSSYTLRVLA 2770
Query: 78 -DEGGLSSTATVN--IRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEGQN 133
D G S A+V+ I V D+++ P F Y F + + + G +G V ATD D G
Sbjct: 2771 YDHGKPSQQASVDFEIAVEDVDEFKPLFNEKRYSFEMYGDMEIGSVIGNVSATDKDGGSA 2830
Query: 134 AVVYYSV--PEDIPFVVDANTGDIRTNKAL 161
+YYS+ P F + NTG I NK L
Sbjct: 2831 GQIYYSIHPPSIDKFRIHINTGIIVVNKDL 2860
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG--QNAVVYY 138
LS+T T I + D+ND P+F S E V E + G+ V VHA D D G + + Y
Sbjct: 1503 LSNTLTAAIHIIDVNDCPPKFDS-KSEVKVREDERVGVIVSHVHAVDPDAGDTKTNIEYA 1561
Query: 139 SVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
V +I F ++ TG+++T+K L K+Q Y
Sbjct: 1562 IVSGNIENTFQLNRKTGELKTSKTLSINKRQTY 1594
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 72/173 (41%), Gaps = 26/173 (15%)
Query: 23 ARDKHELGVTLMQVKATDKDSGKFGL-VEYRLLDNNTDAASYFN---------------- 65
R+ +GV + V A D D+G +EY ++ N + N
Sbjct: 1531 VREDERVGVIVSHVHAVDPDAGDTKTNIEYAIVSGNIENTFQLNRKTGELKTSKTLSINK 1590
Query: 66 ------LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
+ A E + + L+ST + +R+ D+ND+ P F ++ V E Q G
Sbjct: 1591 RQTYNLMIMAMEKRDSSSNIKSLNSTFDLKVRLLDVNDQKPRFVKTEFQAKVRENQPIGT 1650
Query: 119 AVGRVHATDAD--EGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V ++ + D D V Y + ++ F +D+ +G IRT+ LD E + Y
Sbjct: 1651 EVVQLQSIDDDLLPEYKEVTYKILEKNSGFYIDSKSGMIRTSIPLDRENRDKY 1703
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 25/163 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------------- 70
+LG ++QVKA+D D+G + Y + + +F ++ +T
Sbjct: 474 KLGSFVLQVKASDLDAGINSRISYSITSKHD--HRWFYIEESTGRIMLNDYVDREKTDSV 531
Query: 71 EHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
E Q +D G L++ A V +++ D ND +P F F++ E +G++ +D
Sbjct: 532 EIQVSARDHGISPLTNKAIVKVKILDANDNDPYFVVSNMNFTLEENNKVNKFIGKMEVSD 591
Query: 128 AD-EGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D G NA+ Y D F V +T +I NK D E++ Y
Sbjct: 592 PDIIGSNALTCYIDHPD--FRVQPSTCEIYANKKFDRERKSHY 632
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 82 LSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS 139
L S V+I VTD+ND +P F +SLP F + E + + +V +DAD G+N V +
Sbjct: 217 LCSYLKVDITVTDVNDNSPIFDKSLPTSFEIYENVSLSVPIFQVKVSDADSGKNGEVEFE 276
Query: 140 VPEDIPFVVDANTGDI--RTNKALDYEKQQL 168
+ F +D +G+I TNK LD E + +
Sbjct: 277 MFNQNDFRIDKTSGEIFVATNK-LDAETKDV 306
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 9/127 (7%)
Query: 45 KFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQS 104
K + Y+ LD T A ++ L E +D+ L+++ TV+I + DIND P F+
Sbjct: 2526 KGQITTYKNLDRETKA--HYTLTIVAEVISISRDKSPLTASCTVHIEIKDINDNQPVFEK 2583
Query: 105 LPYEFSVPEGQD-GLAVGRVHATDADEGQNA---VVY--YSVPEDIPFV-VDANTGDIRT 157
Y + E G + +V ATDAD+ + A +VY +S E ++ ++ G I T
Sbjct: 2584 QAYHVTQKEDVTVGTKLLQVKATDADDPRQANGKLVYSIHSGQEATEWLRINETDGWIET 2643
Query: 158 NKALDYE 164
+ LD E
Sbjct: 2644 REELDRE 2650
Score = 37.7 bits (86), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 11/98 (11%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHAT----DADEGQNAVVY 137
+S+ V I + D+ND P F + + +V +G+ VG + T D D G N +
Sbjct: 855 VSNITRVVINIRDLNDNTPRFIN---QNNVVAANEGVGVGHLLYTCVTEDLDSGINGEMT 911
Query: 138 YSVPEDI-PFVVDANTGDIRTNKALDYEKQQ---LYLE 171
Y + F + G++RTN +LD+E + +Y+E
Sbjct: 912 YRIKHTTGHFQIHPTRGEVRTNGSLDFETSEGHVIYVE 949
Score = 36.2 bits (82), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFS---VPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDI 144
+ I V D+ND +P F Y P ++ + +V ATD D+G+ V Y + +
Sbjct: 2357 LQINVEDVNDHSPRFSKSIYTVKNVYTPLRKNQFII-KVDATDPDQGEFGFVQYKLGTAL 2415
Query: 145 -PFVVDANTGDIRTNK 159
PF ++ +TG I NK
Sbjct: 2416 DPFTIEQDTGKIYANK 2431
Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 5/91 (5%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY-----SVPE 142
+N V D+ND P + F + V +VHA D D+ + + Y S P
Sbjct: 2254 INFNVEDLNDNKPILDKMQPVFISEAAKVDTLVTQVHAVDNDKTKTDIKYSIETKGSSPN 2313
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
F +D +G I LDYE + R+
Sbjct: 2314 TSMFSIDEYSGKIFLQHTLDYETNHSFKLRI 2344
>gi|344268920|ref|XP_003406304.1| PREDICTED: cadherin-19 [Loxodonta africana]
Length = 771
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 85/188 (45%), Gaps = 46/188 (24%)
Query: 19 YGAMARDKHELGVTLMQVKATDKD---SGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
Y A+ + G ++QV A D D SG + Y LL YF+++P T
Sbjct: 153 YEAIVPEMSPEGTLVIQVTARDADDPSSGNHARLLYSLLL----GQPYFSIEPTTGVIRI 208
Query: 71 ----------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
EH+ IQ + GGL+ T +V IR++DIND P F+ Y SV E
Sbjct: 209 FSEMDRELQEEHRVIIQAKDMIGQPGGLTGTTSVLIRLSDINDNKPIFKKTFYRLSVSES 268
Query: 115 QD-GLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTN-----------KALD 162
G ++G + A D D G+NA + YS+ + D+ T DI TN K +D
Sbjct: 269 APIGTSIGTIKAHDNDIGENAEMEYSIED------DSQTFDIITNNETQEGIVILKKKVD 322
Query: 163 YEKQQLYL 170
+E Q Y+
Sbjct: 323 FEHQNHYV 330
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
IRV+DIND P+F PYE VPE +G V +V A DAD+ G +A + YS+ P
Sbjct: 136 IRVSDINDNEPKFLDEPYEAIVPEMSPEGTLVIQVTARDADDPSSGNHARLLYSLLLGQP 195
Query: 146 -FVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
F ++ TG IR +D E Q+ + RV + +K
Sbjct: 196 YFSIEPTTGVIRIFSEMDRELQEEH--RVIIQAK 227
>gi|326668409|ref|XP_001343511.3| PREDICTED: protocadherin-9, partial [Danio rerio]
Length = 1079
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 80/158 (50%), Gaps = 25/158 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPI----- 76
L + ATD+DSG+ + Y+L N AS+F+LD T E Q
Sbjct: 487 LTTISATDEDSGRNAEIVYQLGPN----ASFFDLDRKTGVLTASRVFDREEQERFLFTVT 542
Query: 77 -QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQ 132
+D G L S A V + + D ND +P+F ++F V E + VG + TDAD G+
Sbjct: 543 ARDNGTRALQSQAAVIVTILDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGE 602
Query: 133 NAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
NAVV S+ D F++D ++G I++N + D E+Q Y
Sbjct: 603 NAVVRLSILNDNENFILDPDSGVIKSNVSFDREQQSSY 640
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 70/165 (42%), Gaps = 37/165 (22%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG----------------------- 74
ATD D+G + +Y LL+ S F LD +G
Sbjct: 165 ATDPDTGPNSVHKYELLN----GQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMK 220
Query: 75 -PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
++D G SSTA + + VTD+ND P F+ E +PE G +V ++ ATDAD
Sbjct: 221 VKVEDGGNPQKSSTAILQVTVTDVNDNRPVFKESQIEVHIPENSPVGTSVVQLQATDADV 280
Query: 131 GQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
G NA + Y + F ++ TG I + LD E+ ++
Sbjct: 281 GANAEIKYMFGAQVSPATRRLFALNTTTGLITVQRPLDREETAIH 325
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
L+ TA V +R+ D ND P F E +V E + + + ATD D G+NA + Y
Sbjct: 447 SLNQTALVRVRLEDENDNPPIFTQPVIELAVMENNLRDMFLTTISATDEDSGRNAEIVYQ 506
Query: 140 V-PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ P F +D TG + ++ D E+Q+ +L
Sbjct: 507 LGPNASFFDLDRKTGVLTASRVFDREEQERFL 538
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 71/174 (40%), Gaps = 30/174 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEY-----------RLLDNNTDAASYFNLDPATEHQGPIQ 77
+G +++Q++ATD D G ++Y RL NT P + I
Sbjct: 266 VGTSVVQLQATDADVGANAEIKYMFGAQVSPATRRLFALNTTTGLITVQRPLDREETAIH 325
Query: 78 DEGGLSS-------TATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA--------VGR 122
L+S AT+ I VTD+ND P L Y S G L+ +
Sbjct: 326 KLTVLASDGSSSPARATITINVTDVNDNAPNID-LRYIISPTNGTVMLSEKDPINTKIAL 384
Query: 123 VHATDADEGQNAVVYYSVPEDIPFVVDA---NTGDIRTNKALDYEKQQLYLERV 173
+ +D D N V + +D+PF + A N + T+ LDYE + Y+ ++
Sbjct: 385 ITVSDKDTDVNGKVICFIEKDVPFHLKAVYDNQYLLETSALLDYEGTKEYIFKI 438
Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 57/137 (41%), Gaps = 37/137 (27%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ--- 77
T+ + TD D+G+ +V +L++N + F LDP + E Q
Sbjct: 589 TVGVITVTDADAGENAVVRLSILNDNEN----FILDPDSGVIKSNVSFDREQQSSYTFDV 644
Query: 78 ---DEGG--LSSTATVNIRVTDINDKNP---------EFQSLPYEFSVPEGQDGLAVGRV 123
D G SS A V I V D+ND P F+ +P ++P G V V
Sbjct: 645 RAVDNGSPPCSSAAKVTINVIDVNDNTPIVIYPPSNTSFKLVPLS-AIP----GSVVAEV 699
Query: 124 HATDADEGQNAVVYYSV 140
A D D G NA + Y++
Sbjct: 700 FAVDGDTGMNAELKYTI 716
>gi|405953973|gb|EKC21529.1| Protocadherin Fat 4 [Crassostrea gigas]
Length = 4768
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 88/194 (45%), Gaps = 31/194 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--------TDAASYF---NLD 67
Y + +G ++ V+ATD DSG G ++Y LL+ N TD + + NLD
Sbjct: 1772 YAGQVLENAAVGTVVLTVQATDIDSGINGQLKYSLLEGNSSSDFGIGTDNGTIYTLQNLD 1831
Query: 68 P-----------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
AT+ P + S+T V I + D+ND +PEF + P + V E
Sbjct: 1832 RETRSVYSLVVIATDQAEPSSSQK--STTTEVIITILDVNDNSPEFVT-PSQIWVKENSS 1888
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVF- 174
G V V A D DEG NA V YS+ F + +TG I + L+ E Q Y +V
Sbjct: 1889 VGSIVYTVSAVDIDEGVNAKVMYSLASHPVFSISPSTGQISLSSQLNRELIQNYTLQVIA 1948
Query: 175 ----LISKFATSYL 184
L S+F+T L
Sbjct: 1949 TDQGLESRFSTQKL 1962
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 82/171 (47%), Gaps = 30/171 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL---------- 82
+ +V ATD D + + Y ++D NTD FN++P T G I G L
Sbjct: 1224 VYKVTATDLDVDENAALTYDIIDGNTD--DMFNINPGT---GQISLNGNLDTETQDLYSL 1278
Query: 83 -------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDA 128
+++A V I V D+ND P F YE ++ E + G + +V A D
Sbjct: 1279 QIQAADNGKSTTFTASAMVIISVLDVNDNTPLFHLTVYEVNIREDAKLGEKLIQVTADDT 1338
Query: 129 DEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
D G NA + YS+ E D FV+D++ G++ K +DYE +++Y +V K
Sbjct: 1339 DLGINAEIEYSLSESDGTFVLDSHNGNLYLAKLVDYETRKVYSLKVIATDK 1389
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 82/179 (45%), Gaps = 34/179 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-- 76
Y R+ +LG L+QV A D D G +EY L +++ F LD H G +
Sbjct: 1316 YEVNIREDAKLGEKLIQVTADDTDLGINAEIEYSL----SESDGTFVLD---SHNGNLYL 1368
Query: 77 ------------------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
D+G LSS A +N+R+ D+ND +PEF + S+ E +
Sbjct: 1369 AKLVDYETRKVYSLKVIATDKGDPRLSSEADLNVRIIDVNDNSPEFTNDFSVLSISESTE 1428
Query: 117 GL-AVGRVHATDADEG-QNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYL 170
++G++ A D D G V Y+ V +D P F +D NTG +R +D E+ Y+
Sbjct: 1429 RFSSIGQILANDKDSGLYGQVEYHIVSQDPPGKNFYIDKNTGRLRLETLVDREEVASYM 1487
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY 137
+G ++ ATV + +TDIND P F ++ Y F VPE G + V A DAD+G N V
Sbjct: 1639 DGTNTAVATVKVNITDINDNAPVFTNVFYSFDVPEDTPIGTTIALVEAVDADQGLNGEVV 1698
Query: 138 YSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
Y++ F +D G IR K +DYE+ L+
Sbjct: 1699 YTLVSTWGQSIFHLDPQMGTIRLIKNVDYEQNHLF 1733
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 88/187 (47%), Gaps = 33/187 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL--DNNTDAASYFNLDPAT------ 70
Y R+ ++G TL+QV ATD DSG G+V + + D+N D F++DP++
Sbjct: 1981 YSKTVREDVKIGTTLLQVTATDSDSGLNGVVRFFITSGDDNAD----FSMDPSSGVLRVQ 2036
Query: 71 ---------EHQGPIQDEG-GLS---STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG 117
++ IQ E G+S S A+V I + D+ND P FQ+ P+ V E
Sbjct: 2037 KNLDYERVNKYTLTIQAEDMGVSPRYSVASVTITIQDVNDFQPVFQNSPFYALVRENMAS 2096
Query: 118 ---LAVGRVHATDADEGQNAVVYYSVPEDIP-----FVVDANTGDIRTNKALDYEKQQLY 169
+ V + A D D N+ + Y + E F +++ +G+I N+ LD E+ Y
Sbjct: 2097 SPPVPVITLSAVDLDSAPNSQLTYVLREGDKGVTSLFQINSVSGEITCNQTLDREQVPQY 2156
Query: 170 LERVFLI 176
V I
Sbjct: 2157 KVLVVAI 2163
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 70/164 (42%), Gaps = 22/164 (13%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRL-----------LDNNTDAASYF---NLDPATEHQ 73
+LG ++ + A D DSG G V Y L + N + LD T Q
Sbjct: 594 QLGTEVISLTAADSDSGLNGSVIYSLHPEVQEMYPDTFNVNIQSGRVITLKQLDRETLSQ 653
Query: 74 GPI------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHAT 126
+ Q LSSTAT+ + V D ND P F Y +V G V +V+A
Sbjct: 654 YVLKVIARDQSVLPLSSTATIYLTVDDENDNVPVFYPQKYYTNVLKSATSGTKVVKVNAV 713
Query: 127 DADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
D D G +YYS P D P FV+D NTG I T + QQ Y
Sbjct: 714 DPDLGDGGRIYYSFPNDYPQFVLDTNTGWISTTYEFERSSQQEY 757
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 25/158 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTD--AASYFNLDPAT---------EHQGPIQ--- 77
++++V+A D D+G +EY + ++ +D A + F ++ T +++ I+
Sbjct: 3055 SIIKVQARDIDTGDNARIEYYISESGSDQLALTLFKINKDTGTLMTKGILDYENQIKYSM 3114
Query: 78 -------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDAD 129
+ + +T V + VT +N+ PEF Y FS E +G +G+V ATD D
Sbjct: 3115 VVIARNPNNVNMRNTVKVTVHVTSVNEYYPEFVQKTYAFSTKESAANGSVIGKVSATDRD 3174
Query: 130 EGQNAVVYYSV--PEDIP-FVVDANTGDIRTNKALDYE 164
+G + VVYY + ++ F V+ TGDI + DYE
Sbjct: 3175 KGIDGVVYYYLIGSSNVKGFSVNYKTGDIFVSGKPDYE 3212
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 77 QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQN 133
QD G SS V I + D ND P F + Y F V E G +G V A DAD G+N
Sbjct: 1069 QDHGAPARSSEVNVTIHILDSNDNRPRFLNQTYSFYVSENVPPGQKIGAVKAVDADIGRN 1128
Query: 134 AVVYYSVPEDI-PFVVDANTGDIRTNKALDYE 164
A + + +PED F +D TG+I T ++ D E
Sbjct: 1129 AELAFLLPEDQDDFAIDFQTGEITTLRSYDRE 1160
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 76/182 (41%), Gaps = 35/182 (19%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------- 68
++FY + +G T+ V+A D D G G V Y L+ +T S F+LDP
Sbjct: 1664 NVFYSFDVPEDTPIGTTIALVEAVDADQGLNGEVVYTLV--STWGQSIFHLDPQMGTIRL 1721
Query: 69 -----------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
A++ P Q S++ V + V D+ND P+F Y V
Sbjct: 1722 IKNVDYEQNHLFSLTILASDKGSPSQ-----STSVLVYLNVKDVNDNEPQFNHQSYAGQV 1776
Query: 112 PEGQD-GLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQ 167
E G V V ATD D G N + YS+ E F + + G I T + LD E +
Sbjct: 1777 LENAAVGTVVLTVQATDIDSGINGQLKYSLLEGNSSSDFGIGTDNGTIYTLQNLDRETRS 1836
Query: 168 LY 169
+Y
Sbjct: 1837 VY 1838
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 82/197 (41%), Gaps = 31/197 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD-NNTDAASY-------------- 63
Y A + +G + + A DKDSG + Y++L NN D
Sbjct: 480 YVANVLETLPVGSFIANLVAEDKDSGINAKLTYKILSGNNNDWFEINSETGLVTLKKQLK 539
Query: 64 FNLDPATEHQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAV 120
+NL P +QD L + + +R++D ND P F Y+ + EG Q G V
Sbjct: 540 YNLAPEVVMNISVQDGASVPLFNYTKLTVRISDENDVTPTFSQSSYQVHLLEGLQLGTEV 599
Query: 121 GRVHATDADEGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEKQQLYL---- 170
+ A D+D G N V YS+ ++ F V+ +G + T K LD E Y+
Sbjct: 600 ISLTAADSDSGLNGSVIYSLHPEVQEMYPDTFNVNIQSGRVITLKQLDRETLSQYVLKVI 659
Query: 171 ---ERVFLISKFATSYL 184
+ V +S AT YL
Sbjct: 660 ARDQSVLPLSSTATIYL 676
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 27/168 (16%)
Query: 29 LGVTLMQVKATDKDS-GKFGLVEYRLLDNNTDAASYFN-------LDPATEHQGPI---- 76
+G ++ +V ATD+DS G G V Y +L N N + A ++ P
Sbjct: 2945 IGQSVARVTATDQDSPGPNGKVSYYILGGNPGGVFQINSENGVISVAKALDYDSPTNIYL 3004
Query: 77 -----QDEGGLSSTATV--NIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDA 128
+D ATV +++TD+ND P F +E VPE ++ +V A D
Sbjct: 3005 LNVSARDSALHYKEATVILTVQLTDVNDNPPLFTQSHFEGFVPENSPSDTSIIKVQARDI 3064
Query: 129 DEGQNAVVYYSVPED-------IPFVVDANTGDIRTNKALDYEKQQLY 169
D G NA + Y + E F ++ +TG + T LDYE Q Y
Sbjct: 3065 DTGDNARIEYYISESGSDQLALTLFKINKDTGTLMTKGILDYENQIKY 3112
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEF-QSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYS 139
L+ T T+ I V D+ND P F +S Y V E Q G + V ATD D G NA + YS
Sbjct: 2170 LTGTGTIYIEVEDVNDNAPMFDRSSTYVGHVQENQPGPTDILTVTATDNDSGPNAQISYS 2229
Query: 140 VPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
+ +D+ F ++ +G + + K LD E LY
Sbjct: 2230 LLDDVDGRFAINTTSGILTSQKLLDREDTALY 2261
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 70/161 (43%), Gaps = 29/161 (18%)
Query: 25 DKHELGVTLMQVKATDKDSGKFG-LVEYRLLDNNTDAASYFNL-DPATEHQ--------- 73
+K +G + ATD D GK G + Y+++ N D + + DP+ Q
Sbjct: 146 EKANIGYKIRLDTATDNDIGKNGNVTNYQIIKRNDDGRKFRTVFDPSKFGQVLYLELIDI 205
Query: 74 --------------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ--DG 117
Q E L+ V I+V+D ND P F Y +V E D
Sbjct: 206 LDREEKDSYELTIRAADQGEYPLTGELVVQIQVSDANDNPPIFSLSQYTSTVNESSPVDT 265
Query: 118 LAVGRVHATDADEGQNAVVYYSVP-EDIPFVVDANTGDIRT 157
L + RV ATD D G+N ++Y++ E F +D TG+IRT
Sbjct: 266 LVI-RVDATDDDIGENGNIFYTMTDESKQFKIDERTGEIRT 305
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 67/157 (42%), Gaps = 32/157 (20%)
Query: 38 ATDKDSGKFGLVEYRLLDN--------NTDAASY-----------FNLDPATEHQGPIQD 78
A D DSG+ GL+ Y L N NT + FNL P +
Sbjct: 913 AVDDDSGQNGLLSYALTTNTNFVQINQNTGMITMSKPYQRVYGNKFNLTVTASDSSPSPN 972
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVH---ATDADEGQNAV 135
S++ V + + D+ND NP F Y ++ E L + H ATDAD G+NA
Sbjct: 973 ----SASMVVQVHIVDVNDHNPVFPKTDYAITLEEST--LVNTQFHTLTATDADVGRNAA 1026
Query: 136 VYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ Y++ +D F + N G + K LD E + LY
Sbjct: 1027 LVYNITKGNDDGKFGIFPN-GKLYIAKQLDRETRDLY 1062
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 28/171 (16%)
Query: 22 MARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--------- 72
++ +G + V A D D G V Y L + F++ P+T
Sbjct: 1882 WVKENSSVGSIVYTVSAVDIDEGVNAKVMYSLA-----SHPVFSISPSTGQISLSSQLNR 1936
Query: 73 --------QGPIQDEGGLS--STATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVG 121
Q D+G S ST + I V D+ND P F Y +V E + G +
Sbjct: 1937 ELIQNYTLQVIATDQGLESRFSTQKLVIMVEDVNDNPPVFVPSVYSKTVREDVKIGTTLL 1996
Query: 122 RVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ATD+D G N VV + + ++ F +D ++G +R K LDYE+ Y
Sbjct: 1997 QVTATDSDSGLNGVVRFFITSGDDNADFSMDPSSGVLRVQKNLDYERVNKY 2047
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 72/159 (45%), Gaps = 25/159 (15%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------------ATEHQGP--- 75
++QV +TDKD G Y + D + ++ FN+D A Q
Sbjct: 2628 IIQVTSTDKDIGINAKAHYSI-DTTANYSNLFNIDADSGNITLKSSIDREALRTQRITIP 2686
Query: 76 -IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD-EGQ 132
I D+G S+ +++ VTD+ND P+ Q P F+ E Q G VG++ A D D
Sbjct: 2687 LIVDDGSFSTRGYLHLFVTDVNDNAPQIQP-PVTFNFLELQPVGSTVGKLTALDNDVTSP 2745
Query: 133 NAVVYYS--VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
N V Y+S +P F +D TG I + + L Y + Y
Sbjct: 2746 NNVSYFSFKLPSS-EFAIDDTTGVITSKETLTYIYHKSY 2783
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 40/188 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-AASYFNLDPATEHQGPIQ 77
Y R+ + + V ATD DSG G V Y L N D FN+DP T G IQ
Sbjct: 2507 YITSIRENVPVSSKVYTVNATDADSGDNGKVVYVLAGGNVDNIQGTFNVDPVT---GVIQ 2563
Query: 78 DEGGL----------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
+ L + T TV + + D+ND +P F ++ + ++PE
Sbjct: 2564 TKVALDRETQDFYNLIIEAHDMGLIRRTGTTTVRVTLIDVNDNSPTFSTI-FSVTIPE-- 2620
Query: 116 DGLAVG----RVHATDADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQ 167
L V +V +TD D G NA +YS+ F +DA++G+I ++D ++
Sbjct: 2621 -DLPVNSFIIQVTSTDKDIGINAKAHYSIDTTANYSNLFNIDADSGNITLKSSID--REA 2677
Query: 168 LYLERVFL 175
L +R+ +
Sbjct: 2678 LRTQRITI 2685
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
LS+ V I + D ND P FQ Y S+ E V V+ATDAD G N V Y +
Sbjct: 2482 LSAYKEVVINIVDENDNTPRFQEGVYITSIRENVPVSSKVYTVNATDADSGDNGKVVYVL 2541
Query: 141 P----EDI--PFVVDANTGDIRTNKALDYEKQQLY 169
++I F VD TG I+T ALD E Q Y
Sbjct: 2542 AGGNVDNIQGTFNVDPVTGVIQTKVALDRETQDFY 2576
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR----VHATDADEGQNAVVYY 138
+S V + V D ND PEF+ YEF E Q+ AVG A D D GQN ++ Y
Sbjct: 870 TSEVKVIVTVLDANDNKPEFK---YEFLDVELQENSAVGHEVYYAFAVDDDSGQNGLLSY 926
Query: 139 SVPEDIPFV-VDANTGDIRTNK 159
++ + FV ++ NTG I +K
Sbjct: 927 ALTTNTNFVQINQNTGMITMSK 948
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSVPE- 142
+ T I V D ND P F Y SV E + V +V ATD D +NA + Y + +
Sbjct: 1188 SVTARIYVLDQNDNPPHFDRDIYRTSVKENLAKYSFVYKVTATDLDVDENAALTYDIIDG 1247
Query: 143 --DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F ++ TG I N LD E Q LY
Sbjct: 1248 NTDDMFNINPGTGQISLNGNLDTETQDLY 1276
Score = 39.7 bits (91), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 53/125 (42%), Gaps = 21/125 (16%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL--------------DPATEHQGPI-Q 77
++ V ATD DSG + Y LLD + D N D A H + +
Sbjct: 2210 ILTVTATDNDSGPNAQISYSLLD-DVDGRFAINTTSGILTSQKLLDREDTALYHLTVVAK 2268
Query: 78 DEGGLSSTATVNIR--VTDINDKNPEFQSLPYEFSV--PEGQDGLAVGRVHATDADEGQN 133
D G L+ +A NI V D+ND P+F+ Y ++ P VG V A D D G N
Sbjct: 2269 DHGNLAKSAEANITVYVDDVNDNVPQFEKQTYNKTLNNPTSLGQFVVG-VTAVDRDVGPN 2327
Query: 134 AVVYY 138
V Y
Sbjct: 2328 GRVTY 2332
>gi|223461503|gb|AAI41391.1| Pcdha2 protein [Mus musculus]
Length = 902
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 19/147 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGG---LSSTATVN 89
+ V+ +D+ S LV + LD DA L + +GG L+ T +
Sbjct: 179 FLDVQTSDELSQSLFLVLGKSLDREEDAEVKLLL---------VATDGGKPELTGTVQIL 229
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPEDI---- 144
I+V D+ND P F Y+ + E +G V +++A+DADEG N+ + YS+ D+
Sbjct: 230 IKVLDVNDNEPTFPQSVYKVQLLENTANGTLVMKLNASDADEGSNSEIVYSLGSDVSSTT 289
Query: 145 --PFVVDANTGDIRTNKALDYEKQQLY 169
F +D N+G++RT LDYE++ Y
Sbjct: 290 RTKFQIDPNSGEVRTKGELDYEERTSY 316
Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 28/167 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVE--------YRLLDNNTDAASYFNLDPATEHQGP----- 75
LG + + +D+DSG G V ++L+ + S LD A + +
Sbjct: 365 LGAVIALISVSDRDSGVNGQVTCSLSPHVPFKLVSTFKNYYSLV-LDSALDREATADYKV 423
Query: 76 --IQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
+GG L +TA+V++ V D+ND P F Y V E G + V A DAD
Sbjct: 424 MVTARDGGSPSLRATASVSVEVADVNDNAPVFAQPEYTVFVKENNPPGAHIFTVSAMDAD 483
Query: 130 EGQNAVVYYSVPED-------IPFV-VDANTGDIRTNKALDYEKQQL 168
+NA+V YS+ E +V V A +G + + LD+E+ +L
Sbjct: 484 AQENALVSYSLVERRVGERLLSSYVSVHAESGKVFALQPLDHEELEL 530
Score = 42.4 bits (98), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 60/141 (42%), Gaps = 27/141 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLDPAT-----------------E 71
G +M++ A+D D G + Y L D ++ + F +DP + E
Sbjct: 258 GTLVMKLNASDADEGSNSEIVYSLGSDVSSTTRTKFQIDPNSGEVRTKGELDYEERTSYE 317
Query: 72 HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQ----SLPYEFSVPEGQDGLAVGRVHA 125
Q D+G +S +++++ DIND PE SLP + + P G + +
Sbjct: 318 IQVIASDKGTPAMSGHCKISVKLVDINDNTPEVSITSLSLPVQENAPLGA---VIALISV 374
Query: 126 TDADEGQNAVVYYSVPEDIPF 146
+D D G N V S+ +PF
Sbjct: 375 SDRDSGVNGQVTCSLSPHVPF 395
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 70/186 (37%), Gaps = 50/186 (26%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------------NTDAASYFN 65
Y ++ + G + V A D D+ + LV Y L++ + ++ F
Sbjct: 460 YTVFVKENNPPGAHIFTVSAMDADAQENALVSYSLVERRVGERLLSSYVSVHAESGKVFA 519
Query: 66 LDPA-------TEHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
L P + Q +D G L S T+ + V D ND P +P+G
Sbjct: 520 LQPLDHEELELLQFQVTARDAGVPALGSNVTLQVFVLDENDNAP--------LLLPQGAV 571
Query: 117 GLA----------------VGRVHATDADEGQNAVVYYSVPEDIP----FVVDANTGDIR 156
G+ V +V A DAD G NA + Y + + F V TG+I
Sbjct: 572 GVGGSVSELVPRSVGSGHVVTKVRAVDADSGYNAWLSYELQSTVGMRSLFRVGLYTGEIS 631
Query: 157 TNKALD 162
T +ALD
Sbjct: 632 TTRALD 637
>gi|326673644|ref|XP_002664482.2| PREDICTED: protocadherin-11 X-linked [Danio rerio]
Length = 1098
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 72/161 (44%), Gaps = 24/161 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G L+++ ATD DSG L+ Y L DA FN+D + E Q
Sbjct: 482 GTQLIKISATDADSGSNALIIYSL---GPDAPDGFNIDSRSGILSVVKRLDREKQEKYSF 538
Query: 76 ---IQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD 129
+D G L S TV + V D ND +P F Y F VPE VG + TDAD
Sbjct: 539 TVIARDNGTTPLQSNVTVKLIVQDQNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDAD 598
Query: 130 EGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
G NAVV S+ F++D TG I+ N D E+Q Y
Sbjct: 599 AGDNAVVTLSIINGKDNFIIDPKTGVIKPNITFDREQQSSY 639
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+++A V I++ D ND P F + S+PE D G + ++ ATDAD G NA++ YS+
Sbjct: 446 LNTSAMVLIKIKDENDNVPVFPQPEIQLSIPENNDPGTQLIKISATDADSGSNALIIYSL 505
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
D P F +D+ +G + K LD EKQ+ Y
Sbjct: 506 GPDAPDGFNIDSRSGILSVVKRLDREKQEKY 536
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 22/171 (12%)
Query: 5 PIPSALE--MTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAAS 62
P+PSA + + + + + + + E G+ +++ DK L+ + LD T
Sbjct: 159 PVPSAFDPDIGINGIQHYELVKSVSEFGLDIIETPEGDKWPQ---LIVQQSLDRETKDTF 215
Query: 63 YFNLDPATEHQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
+ ++D G SSTA + + V+D+ND P F+ E +VPE G +
Sbjct: 216 VMKIK--------VEDGGNPPKSSTAILQVTVSDVNDNRPVFKDSEVEVNVPENAPMGTS 267
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYE 164
V +HATDAD G NA +++S I F +D+ TG I + LD E
Sbjct: 268 VTHLHATDADLGSNAQIHFSFSNQISPSTKRHFAIDSTTGLITVKQPLDRE 318
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 65/164 (39%), Gaps = 30/164 (18%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPIQ--- 77
T+ + TD D+G +V +++ + F +DP T E Q
Sbjct: 588 TVGLITVTDADAGDNAVVTLSIINGKDN----FIIDPKTGVIKPNITFDREQQSSYTFVV 643
Query: 78 ---DEGGLSST--ATVNIRVTDINDKNPEF----QSLPYEFSVPEGQDGLAVGRVHATDA 128
D G + +T A V I V D+ND P F + Y+ G V RV A D
Sbjct: 644 KAVDAGLMQTTSYAKVTINVVDVNDNRPVFVIPSSNYSYDLVPSNTSPGSVVTRVFAIDN 703
Query: 129 DEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLY 169
D G NA + YS+ F +D TG+I + + Q L+
Sbjct: 704 DTGMNAELQYSIIGGSLRGLFTIDKTTGNITLQEKIVAADQGLH 747
>gi|54013436|dbj|BAD60807.1| protocadherin2-gamma-v5-A [Danio rerio]
Length = 951
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 18/146 (12%)
Query: 23 ARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------E 71
R+ G + V A D D G G V Y N + FN++ T E
Sbjct: 262 VRENSPAGTVMGTVSAADADEGVNGHVSYYFALANKEERELFNINSETGEVTLLAHLDYE 321
Query: 72 HQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVH 124
Q Q D+GGLS T + I VTD ND P Q + + ++ E G V ++
Sbjct: 322 SQNSYQLNINARDKGGLSDTCKIVIDVTDENDNPPTIQLMSFSNTIAENSPVGTTVAVIN 381
Query: 125 ATDADEGQNAVVYYSVPEDIPFVVDA 150
DAD G+N +V++S+ ++IPF +++
Sbjct: 382 VEDADSGKNGLVHFSINQNIPFKIES 407
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 26/163 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDN-----NTDAASYFNL--------DPATEHQGP 75
+G T+ + D DSGK GLV + + N + + Y++L + TE+
Sbjct: 373 VGTTVAVINVEDADSGKNGLVHFSINQNIPFKIESTFSEYYSLITDDMLDRETVTEYNIT 432
Query: 76 I--QDEGGLS--STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
I D+G + S T+N++++D+ND P+F S Y+ V E G+ + V A DAD
Sbjct: 433 ILVSDQGSPARHSNKTLNVKISDVNDNPPKFGSDEYKTFVNENNSPGVTILTVKANDADW 492
Query: 131 GQNA-VVYYSVPEDI---PF----VVDANTGDIRTNKALDYEK 165
G NA + Y+ EDI P VDA TG + K+ D+E+
Sbjct: 493 GPNAQLSYFLKDEDIRGAPLSSLVSVDALTGTVHAVKSFDFEQ 535
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 75/186 (40%), Gaps = 37/186 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + + GVT++ VKA D D G + Y L D + A +L G +
Sbjct: 468 YKTFVNENNSPGVTILTVKANDADWGPNAQLSYFLKDEDIRGAPLSSLVSVDALTGTVHA 527
Query: 78 ------------------DEGG---LSSTATVNIRVTDINDKNPEF-------QSLPYEF 109
+GG LSS T+ I + D ND P+ S+ E
Sbjct: 528 VKSFDFEQLKSFSFNVTARDGGSPPLSSEVTITINIQDQNDNAPQVLYPVQTGASVVAEI 587
Query: 110 SVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL---D 162
VP D G V +V A D D GQNA + Y + P+ F V G+IRT + + D
Sbjct: 588 -VPRAVDVGYLVTKVVAVDVDSGQNAWLSYKLQKAPDRALFEVGLQNGEIRTVRQVTDKD 646
Query: 163 YEKQQL 168
KQ+L
Sbjct: 647 AVKQKL 652
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 67/168 (39%), Gaps = 27/168 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYFNLDPATEHQGPIQDE 79
LG +A D D G G+ Y+L + + TD Y + E +DE
Sbjct: 159 LGARFPLDRAMDTDVGLNGIQSYKLHPTDNFKLEVHSLTDGNKYIEMILQRELDREERDE 218
Query: 80 ----------GGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
G + TV I VT D ND P + ++ V E G +G V A
Sbjct: 219 IKLVLLATDGGSPQKSGTVKIHVTILDANDNAPVCKQSVFKTEVRENSPAGTVMGTVSAA 278
Query: 127 DADEGQNAVVYY-----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
DADEG N V Y + E F +++ TG++ LDYE Q Y
Sbjct: 279 DADEGVNGHVSYYFALANKEERELFNINSETGEVTLLAHLDYESQNSY 326
>gi|405951684|gb|EKC19577.1| Protocadherin-1 [Crassostrea gigas]
Length = 1027
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 21/175 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-----------AASYFNLD 67
Y A + +E G ++ + A+DKD + Y + N D A F+ +
Sbjct: 465 YFASIVENNEPGKQIVSLLASDKDLDNNSRIRYYIQGKNLDFAIDSRSGALKAKRSFDRE 524
Query: 68 PATEHQGPI--QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGR 122
A+E++ I D G L++T TV + V D+ND P F+ ++F V E G+ VG+
Sbjct: 525 HASEYEVTIVATDSGFPPLTATTTVFVSVIDVNDNAPSFKVSHFQFFVLENMPAGMKVGQ 584
Query: 123 VHATDADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ ATD D G N + +SV E IPF+V + G I+T++ LD E++ Y+ +V
Sbjct: 585 LSATDKDVGVNGNLLFSVTEGYKNTIPFIVFQD-GSIKTSETLDREEKDRYVFQV 638
Score = 44.3 bits (103), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNA-VVYYS 139
LSST ++ + V D+ND P F Y S+ E + G + + A+D D N+ + YY
Sbjct: 440 LSSTVSITVLVQDVNDNAPVFSKKSYFASIVENNEPGKQIVSLLASDKDLDNNSRIRYYI 499
Query: 140 VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+++ F +D+ +G ++ ++ D E Y
Sbjct: 500 QGKNLDFAIDSRSGALKAKRSFDREHASEY 529
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
SS ++I VTD+ND P+F Y SV E G V V A+D D N V Y +
Sbjct: 219 SSDINIDITVTDVNDNYPQFGQPSYNISVQENATIGTIVLTVTASDEDVRDNGRVTYGIS 278
Query: 142 EDIP-----FVVDANTGDI 155
+ F++D TGDI
Sbjct: 279 GETTFFSLFFMIDKYTGDI 297
>gi|41054976|ref|NP_955764.1| cadherin-24 precursor [Mus musculus]
gi|81911451|sp|Q6PFX6.1|CAD24_MOUSE RecName: Full=Cadherin-24; Flags: Precursor
gi|34784506|gb|AAH57373.1| Cadherin-like 24 [Mus musculus]
Length = 781
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 84/185 (45%), Gaps = 31/185 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV A D D +G +L+ D +F++DP T
Sbjct: 155 YHATVPEMSNVGTSVIQVTAHDADDPSYG-NSAKLVYTVLDGLPFFSVDPQTGVVRTAIP 213
Query: 71 --------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E IQ + GGLS + TV + ++D+ND P+F Y+FSV E
Sbjct: 214 NMDRETQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAG 273
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV-----PEDIPFVVDANTGD--IRTNKALDYEKQQL 168
G VGR+ A D D G NA+V YS+ E D+ D + K LD+E ++
Sbjct: 274 PGTLVGRLKAQDPDLGDNALVAYSILNGEGSEVFSISTDSQGQDGLLTVRKPLDFETRRS 333
Query: 169 YLERV 173
Y RV
Sbjct: 334 YTFRV 338
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 63/127 (49%), Gaps = 22/127 (17%)
Query: 50 EYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF 109
+Y LL D AS L+P +E I+V DIND P F PY
Sbjct: 114 QYVLLAQAVDRASNRPLEPPSEFI----------------IKVQDINDNPPVFPLGPYHA 157
Query: 110 SVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIPFV-VDANTGDIRTN-KALDY 163
+VPE + G +V +V A DAD+ G +A + Y+V + +PF VD TG +RT +D
Sbjct: 158 TVPEMSNVGTSVIQVTAHDADDPSYGNSAKLVYTVLDGLPFFSVDPQTGVVRTAIPNMDR 217
Query: 164 EKQQLYL 170
E Q+ +L
Sbjct: 218 ETQEEFL 224
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 11/108 (10%)
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVH 124
+DPA +GP +D A+V + V D + P F Y +VPE + G VG++
Sbjct: 345 IDPAYLRRGPFKD------VASVRVTVQDAPEP-PAFTQATYHLAVPENKAPGTLVGQIS 397
Query: 125 ATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
A+D D + + Y +P P F ++ G IRT LD E + +
Sbjct: 398 ASDLDSPASPIRYSILPHSDPERCFSIEPEDGTIRTAVRLDREARVWH 445
>gi|54013438|dbj|BAD60808.1| protocadherin2-gamma-v5-sCP1 [Danio rerio]
Length = 969
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 18/146 (12%)
Query: 23 ARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------E 71
R+ G + V A D D G G V Y N + FN++ T E
Sbjct: 262 VRENSPAGTVMGTVSAADADEGVNGHVSYYFALANKEERELFNINSETGEVTLLAHLDYE 321
Query: 72 HQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVH 124
Q Q D+GGLS T + I VTD ND P Q + + ++ E G V ++
Sbjct: 322 SQNSYQLNINARDKGGLSDTCKIVIDVTDENDNPPTIQLMSFSNTIAENSPVGTTVAVIN 381
Query: 125 ATDADEGQNAVVYYSVPEDIPFVVDA 150
DAD G+N +V++S+ ++IPF +++
Sbjct: 382 VEDADSGKNGLVHFSINQNIPFKIES 407
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 26/163 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDN-----NTDAASYFNL--------DPATEHQGP 75
+G T+ + D DSGK GLV + + N + + Y++L + TE+
Sbjct: 373 VGTTVAVINVEDADSGKNGLVHFSINQNIPFKIESTFSEYYSLITDDMLDRETVTEYNIT 432
Query: 76 I--QDEGGLS--STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
I D+G + S T+N++++D+ND P+F S Y+ V E G+ + V A DAD
Sbjct: 433 ILVSDQGSPARHSNKTLNVKISDVNDNPPKFGSDEYKTFVNENNSPGVTILTVKANDADW 492
Query: 131 GQNA-VVYYSVPEDI---PF----VVDANTGDIRTNKALDYEK 165
G NA + Y+ EDI P VDA TG + K+ D+E+
Sbjct: 493 GPNAQLSYFLKDEDIRGAPLSSLVSVDALTGTVHAVKSFDFEQ 535
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 75/186 (40%), Gaps = 37/186 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ- 77
Y + + GVT++ VKA D D G + Y L D + A +L G +
Sbjct: 468 YKTFVNENNSPGVTILTVKANDADWGPNAQLSYFLKDEDIRGAPLSSLVSVDALTGTVHA 527
Query: 78 ------------------DEGG---LSSTATVNIRVTDINDKNPEF-------QSLPYEF 109
+GG LSS T+ I + D ND P+ S+ E
Sbjct: 528 VKSFDFEQLKSFSFNVTARDGGSPPLSSEVTITINIQDQNDNAPQVLYPVQTGASVVAEI 587
Query: 110 SVPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL---D 162
VP D G V +V A D D GQNA + Y + P+ F V G+IRT + + D
Sbjct: 588 -VPRAVDVGYLVTKVVAVDVDSGQNAWLSYKLQKAPDRALFEVGLQNGEIRTVRQVTDKD 646
Query: 163 YEKQQL 168
KQ+L
Sbjct: 647 AVKQKL 652
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 67/168 (39%), Gaps = 27/168 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYFNLDPATEHQGPIQDE 79
LG +A D D G G+ Y+L + + TD Y + E +DE
Sbjct: 159 LGARFPLDRAMDTDVGLNGIQSYKLHPTDNFKLEVHSLTDGNKYIEMILQRELDREERDE 218
Query: 80 ----------GGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
G + TV I VT D ND P + ++ V E G +G V A
Sbjct: 219 IKLVLLATDGGSPQKSGTVKIHVTILDANDNAPVCKQSVFKTEVRENSPAGTVMGTVSAA 278
Query: 127 DADEGQNAVVYY-----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
DADEG N V Y + E F +++ TG++ LDYE Q Y
Sbjct: 279 DADEGVNGHVSYYFALANKEERELFNINSETGEVTLLAHLDYESQNSY 326
>gi|291387494|ref|XP_002710307.1| PREDICTED: protocadherin beta 14 [Oryctolagus cuniculus]
Length = 809
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 73/172 (42%), Gaps = 20/172 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG--- 74
Y + ++G ++ + A D D+G FG + Y L + D F ++P T G
Sbjct: 246 LYEVQVPEDTDVGSRIITLSAKDIDAGSFGKISYTLFHASEDVRKTFEINPVTGEVGLKS 305
Query: 75 -----PIQ---------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
IQ D GGLS T+ I+V D+ND PE S+PE V
Sbjct: 306 HLDFEVIQSYTITTQATDGGGLSGKCTLVIKVLDVNDNPPEVTISSITNSIPENTPETLV 365
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVD---ANTGDIRTNKALDYEKQQLY 169
D D G N + S+ +D+PF++ N + T+ ALD E + Y
Sbjct: 366 AIFSVRDPDSGDNGRMVCSIQDDLPFLLKPTFKNFYTLVTDGALDREARAEY 417
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L++ V ++V+D+ND P F Y V E GL +G V A+D D G NA V YS+
Sbjct: 431 LTTRHHVAVQVSDVNDNAPAFSQAAYTLLVRENNSPGLLIGSVSASDRDAGANAQVTYSL 490
Query: 141 --PEDIPFV-----VDANTGDIRTNKALDYEKQQLY 169
P P V V A++G + +ALDYE + +
Sbjct: 491 LPPPQQPDVAALVSVHADSGQLYALRALDYEALRAF 526
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
LS T V I+V DIND +PEF YE VPE D G + + A D D G + Y++
Sbjct: 222 LSGTTLVLIKVLDINDNSPEFAENLYEVQVPEDTDVGSRIITLSAKDIDAGSFGKISYTL 281
Query: 141 ---PEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
ED+ F ++ TG++ LD+E Q Y
Sbjct: 282 FHASEDVRKTFEINPVTGEVGLKSHLDFEVIQSY 315
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 79/186 (42%), Gaps = 34/186 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL------------DNNTDAASYFNL 66
Y + R+ + G+ + V A+D+D+G V Y LL + D+ + L
Sbjct: 456 YTLLVRENNSPGLLIGSVSASDRDAGANAQVTYSLLPPPQQPDVAALVSVHADSGQLYAL 515
Query: 67 DP-------ATEHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFS------V 111
A E D G LSS A V +++ D ND P P S V
Sbjct: 516 RALDYEALRAFEFGVRAADRGSPALSSEARVRVQLLDANDHAPAVLYPPANGSAACPELV 575
Query: 112 PEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL---DYE 164
P D G V +V A D D GQNA + + + E F V A++G++RT + L D
Sbjct: 576 PRAADAGYLVTKVVAVDGDAGQNAWLSFELLKATEPGLFGVWAHSGEVRTARPLSERDAP 635
Query: 165 KQQLYL 170
+Q+L +
Sbjct: 636 RQRLLV 641
>gi|355778438|gb|EHH63474.1| hypothetical protein EGM_16447 [Macaca fascicularis]
Length = 798
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 84/185 (45%), Gaps = 31/185 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV A D D +G +L+ D +F++DP T
Sbjct: 155 YHATVPEMSNVGTSVIQVTAHDADDPSYG-NSAKLVYTVLDGLPFFSVDPQTGVVRTAIP 213
Query: 71 --------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E IQ + GGLS + TV + ++D+ND P+F Y+FSV E
Sbjct: 214 NMDRETQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAG 273
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV-----PEDIPFVVDANTGD--IRTNKALDYEKQQL 168
G VGR+ A D D G NA++ YS+ E D+ D + K LD+E ++
Sbjct: 274 PGTLVGRLRAQDPDLGDNALMAYSILDGEGSEAFSISTDSQGRDGLLTVRKPLDFESRRS 333
Query: 169 YLERV 173
Y RV
Sbjct: 334 YTFRV 338
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 63/127 (49%), Gaps = 22/127 (17%)
Query: 50 EYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF 109
+Y LL D AS L+P +E I+V DIND P F PY
Sbjct: 114 QYVLLAQAVDRASNRPLEPPSEF----------------IIKVQDINDNPPIFPLGPYHA 157
Query: 110 SVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIPFV-VDANTGDIRTN-KALDY 163
+VPE + G +V +V A DAD+ G +A + Y+V + +PF VD TG +RT +D
Sbjct: 158 TVPEMSNVGTSVIQVTAHDADDPSYGNSAKLVYTVLDGLPFFSVDPQTGVVRTAIPNMDR 217
Query: 164 EKQQLYL 170
E Q+ +L
Sbjct: 218 ETQEEFL 224
Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 12/122 (9%)
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVH 124
+DPA +GP +D A+V + V D + P F Y +VPE + G VG++
Sbjct: 345 IDPAYLRRGPFKD------VASVRVVVQDAPEP-PAFTQAAYHLTVPENKAPGTLVGQIS 397
Query: 125 ATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERVFLISKFAT 181
A D D + + Y +P P F + G I T LD E +++ L ++
Sbjct: 398 AADLDSPASPIRYSILPHSDPERCFSIQPEEGTIHTAAPLDREA-RVWHNLTVLATELGW 456
Query: 182 SY 183
S+
Sbjct: 457 SW 458
>gi|14196462|ref|NP_114398.1| protocadherin gamma-A2 isoform 2 precursor [Homo sapiens]
gi|5457065|gb|AAD43769.1|AF152508_1 protocadherin gamma A2 short form protein [Homo sapiens]
gi|62740017|gb|AAH93871.1| Protocadherin gamma subfamily A, 2, isoform 2 precursor [Homo
sapiens]
gi|85397826|gb|AAI04951.1| Protocadherin gamma subfamily A, 2, isoform 2 precursor [Homo
sapiens]
gi|119582345|gb|EAW61941.1| hCG1982215, isoform CRA_t [Homo sapiens]
Length = 823
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 75/162 (46%), Gaps = 21/162 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL---------------DPATEHQ 73
+G ++ V ATD D G + V Y L + + + F L + AT H+
Sbjct: 257 VGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGELTIIKDLDYEDATFHE 316
Query: 74 GPI--QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADE 130
I QD GL + A V + V D+ND PEF SV E G +G + D D
Sbjct: 317 IDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLFNVHDRDS 376
Query: 131 GQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
GQNA S+PED+PF ++ + + + T +ALD E+ Y
Sbjct: 377 GQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFY 418
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 69 ATEHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVH 124
A H + +GG LS T+ + ++V D ND P F Y S+PE G + V
Sbjct: 206 AVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRISIPENTLVGTRILTVT 265
Query: 125 ATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYE 164
ATDADEG A V Y + E P F + + +G++ K LDYE
Sbjct: 266 ATDADEGYYAQVVYFL-EKSPGETSEVFELKSTSGELTIIKDLDYE 310
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 67/142 (47%), Gaps = 17/142 (11%)
Query: 46 FGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSL 105
+ LV R LD + S++N+ + G LS+ A + ++V DIND P F
Sbjct: 402 YRLVTTRALDR--EQFSFYNITLTAKDGG----NPSLSTDAHILLQVADINDNAPAFSRT 455
Query: 106 PYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDIP--------FVVDANTGDIR 156
Y +PE G +V V A D D NA V YS ED ++++TG +
Sbjct: 456 SYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLY 515
Query: 157 TNKALDYEKQQLYLERVFLISK 178
++ DYE QL +V++I++
Sbjct: 516 ALRSFDYE--QLRDLQVWVIAR 535
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 74/175 (42%), Gaps = 36/175 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA---SYFNLDPAT-----------EHQGP 75
G ++ V A D DS V Y ++ A SY +++ T E
Sbjct: 468 GASVFSVTAHDPDSNDNAHVTYSFAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRD 527
Query: 76 IQ------DEGG--LSSTATVNIRVTDINDKNPE--FQSLP------YEFSVPEGQDGLA 119
+Q D G LSS ++++ V D ND PE + + P E + + G
Sbjct: 528 LQVWVIARDSGNPPLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYL 587
Query: 120 VGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL---DYEKQQL 168
V +V A D D GQNA + Y + E F V +TG++RT +AL D KQ L
Sbjct: 588 VTKVVAVDRDSGQNAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSL 642
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP 145
+V + +TDIND P F E + E G + +A DAD G+NA+ Y++ +
Sbjct: 118 SVEVEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDH 177
Query: 146 FVVDANTG-------DIRTNKALDYEKQQLY 169
F +D G ++ ++LD E++ ++
Sbjct: 178 FSLDVRRGADGNKYPELVLERSLDREEEAVH 208
>gi|344245256|gb|EGW01360.1| Protocadherin alpha-4 [Cricetulus griseus]
Length = 2770
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 19/147 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGG---LSSTATVN 89
+ V+ D+ S LV + LD +A L + +GG L+ T +
Sbjct: 485 FLDVQTNDELSQSLFLVLGKSLDREENAEVKLLL---------VATDGGKPELTGTVQIL 535
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDI---- 144
I+V D+ND P F Y+ + E +G V +++A+DADEG N+ + YS+ D+
Sbjct: 536 IKVLDVNDNEPTFPQSVYKVQLLENTANGTLVVKLNASDADEGSNSEIVYSLSSDVSSTT 595
Query: 145 --PFVVDANTGDIRTNKALDYEKQQLY 169
F +D +G+IRTN LDYE++ Y
Sbjct: 596 RTKFQIDPTSGEIRTNGGLDYEERTAY 622
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYY-- 138
L+ T + I V D ND PEF Y + E + V +++A+DADEG N + Y
Sbjct: 2086 LTGTVQLLIDVLDANDNAPEFDQSVYNVRLLESTPNETLVIKLNASDADEGMNKEILYFF 2145
Query: 139 --SVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
V ED+ F +D+ +G+I+ ALDYE ++LY
Sbjct: 2146 SNLVLEDVKSKFTIDSTSGEIKVKGALDYEDRKLY 2180
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 74/180 (41%), Gaps = 35/180 (19%)
Query: 11 EMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL----------------- 53
EM SLF ++ +LG + + +D+DSG G V L
Sbjct: 2213 EMAITSLFLPI--KEDAQLGTVIALISVSDRDSGVNGQVTCSLTPHVPFKLVSTFKNYYS 2270
Query: 54 --LDNNTD---AASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYE 108
LD+ D A+Y + A + P L +TA+V++ V D+ND P F Y
Sbjct: 2271 LVLDSALDRETVANYHVVVTARDGGSP-----SLWATASVSVEVADVNDNAPAFAQPEYT 2325
Query: 109 FSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDI-----PFVVDANTGDIRTNKALD 162
V E G + V A DAD G NA + Y + PF V TG+I T + LD
Sbjct: 2326 VFVKENNPPGAHIFTVRAVDADSGYNAWLSYELQPAAGGVRSPFRVGLYTGEISTTRVLD 2385
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
L T + I V D+ND P F Y + E +G V ++A+DADEG N V +S
Sbjct: 204 LEGTVRLQITVLDVNDNAPLFDQAVYRAQLVESTANGTLVTTLNASDADEGVNGEVVFSF 263
Query: 141 PEDI------PFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
D+ F VD+ G+IR LDYEK + Y +V + K
Sbjct: 264 GNDVSADIQEKFKVDSILGEIRVIGDLDYEKIKSYEIQVKAVDK 307
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV 140
L+ T + I V D ND +P F Y +PE +G V +V+A+D DEG N V YS
Sbjct: 1282 LTGTVQLLITVLDANDNSPVFDRSLYTVKLPENVPNGTLVVKVNASDLDEGLNGDVMYSF 1341
Query: 141 PEDI------PFVVDANTGDIRTNKALDYEKQQLY 169
DI F +D TG I +D+E+ + Y
Sbjct: 1342 STDISPDVKRKFYIDPVTGQITVKGYIDFEECKSY 1376
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 26/166 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNN-----TDAASYFNL--------DPATEHQGP 75
+G + + +D+DSG G V L N + +Y++L + T+++
Sbjct: 1425 VGTVIALISVSDRDSGANGQVTCSLTPNVPFKLVSTFKNYYSLVLDSTLDRETTTDYKVV 1484
Query: 76 IQDEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADE 130
+ G L +TA+V++ V D+ND P F Y V E G + V ATDAD
Sbjct: 1485 VTARDGGSPSLWTTASVSVEVADVNDNAPAFAQPEYTVFVKENNPPGAHIFTVSATDADA 1544
Query: 131 GQNAVVYYSVPED-------IPFV-VDANTGDIRTNKALDYEKQQL 168
+NA+V YS+ E FV V A +G + + LD+E+ +L
Sbjct: 1545 QENALVSYSLVERRVGERLLSSFVSVHAESGKVFALQPLDHEELEL 1590
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 26/166 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNN-----TDAASYFNL--DPATEHQ-------- 73
LG + + +D+DSG G V L + + +Y++L D A + +
Sbjct: 672 LGTVIALISVSDRDSGANGQVTCSLTPHVPFKLVSTFKNYYSLVLDSALDRETTADYKVV 731
Query: 74 --GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADE 130
P + L +TA++++ V D+ND P F Y V E G + V ATDAD
Sbjct: 732 VTAPPRGSPSLWATASMSVEVADVNDNAPAFAHPEYTVFVKENNPPGAHIFTVSATDADA 791
Query: 131 GQNAVVYYSVPED-------IPFV-VDANTGDIRTNKALDYEKQQL 168
+NA+V YS+ E FV V A +G + + LD+E+ +L
Sbjct: 792 QENALVSYSLVEQRLGERLLSSFVSVHAESGKVFALQPLDHEELEL 837
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 71/181 (39%), Gaps = 39/181 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------------NTDAASYFN 65
Y ++ + G + V ATD D+ + LV Y L++ + ++ F
Sbjct: 1520 YTVFVKENNPPGAHIFTVSATDADAQENALVSYSLVERRVGERLLSSFVSVHAESGKVFA 1579
Query: 66 LDP-------ATEHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-- 114
L P + Q +D G L S T+ + V D ND P L E SV G
Sbjct: 1580 LQPLDHEELELLQFQVSARDAGVPALGSNVTLQVFVLDENDNAPLL--LEPEGSVSGGVV 1637
Query: 115 --------QDGLAVGRVHATDADEGQNAVVYYSVPED-----IPFVVDANTGDIRTNKAL 161
G V +V A DAD G NA + Y + IPF V TG+I T + L
Sbjct: 1638 SRLVSRSVGAGHVVAKVRAVDADSGYNAWLSYELQSSAGNSRIPFRVGLYTGEITTTRIL 1697
Query: 162 D 162
D
Sbjct: 1698 D 1698
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 30/143 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLL-DNNTDAASYFNLDPATEHQGPIQDEGGL------ 82
G ++++ A+D D G + Y L D ++ + F +DP + G I+ GGL
Sbjct: 564 GTLVVKLNASDADEGSNSEIVYSLSSDVSSTTRTKFQIDPTS---GEIRTNGGLDYEERT 620
Query: 83 ----------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD---GLAVGRV 123
S +++++ DIND PE S+ S P +D G + +
Sbjct: 621 AYEIQVIASDKGTPSMSGHCKISVKLVDINDNTPEV-SITSFLSDPVKEDALLGTVIALI 679
Query: 124 HATDADEGQNAVVYYSVPEDIPF 146
+D D G N V S+ +PF
Sbjct: 680 SVSDRDSGANGQVTCSLTPHVPF 702
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 68/179 (37%), Gaps = 35/179 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------------NTDAASYFN 65
Y ++ + G + V ATD D+ + LV Y L++ + ++ F
Sbjct: 767 YTVFVKENNPPGAHIFTVSATDADAQENALVSYSLVEQRLGERLLSSFVSVHAESGKVFA 826
Query: 66 LDP-------ATEHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQS--------LPYE 108
L P + Q +D G L S T+ + V D ND P S +
Sbjct: 827 LQPLDHEELELLQFQVSARDAGVPALGSNVTLQVFVLDENDNAPVLLSHGAVGAGGTVSQ 886
Query: 109 FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP-----FVVDANTGDIRTNKALD 162
F G V +V A DAD G NA + Y + F V TG+I T ++LD
Sbjct: 887 FVSRSVVSGHVVAKVRAIDADSGYNAWLSYELQSSAGNSRSLFRVGLYTGEISTTRSLD 945
>gi|326935583|ref|XP_003213849.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like,
partial [Meleagris gallopavo]
Length = 976
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 66/139 (47%), Gaps = 25/139 (17%)
Query: 60 AASYFNLDPAT---EHQGPI------------------QDEGGLSSTATVNIRVTDINDK 98
AA F +DP + +GP+ Q+ G S+TATV I V D ND
Sbjct: 12 AACVFEIDPRSGVIRTRGPVDREAVEAFELLVEAADQGQEPGPRSATATVRIAVEDDNDN 71
Query: 99 NPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGD 154
+P+F Y VPE AV RV ATD D+G NAVV+YS+ F +DA TG
Sbjct: 72 SPQFSEKRYVVQVPEDVLPNTAVLRVTATDRDKGSNAVVHYSIVSGNTRGHFYIDAQTGA 131
Query: 155 IRTNKALDYEKQQLYLERV 173
+ LDYE + + R+
Sbjct: 132 LDVVTPLDYEASKEFTLRI 150
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 74/164 (45%), Gaps = 32/164 (19%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNT---------------------DAASYFNLDPATE 71
+++V ATD+D G +V Y ++ NT +A+ F L +
Sbjct: 94 VLRVTATDRDKGSNAVVHYSIVSGNTRGHFYIDAQTGALDVVTPLDYEASKEFTLRIRAQ 153
Query: 72 HQG--PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
G P+ + GL V ++V D+ND P F S P++ +V E G +V V A DA
Sbjct: 154 DGGRPPLSNISGL-----VTVQVLDVNDNAPIFVSTPFQATVLENVPVGYSVIHVQAIDA 208
Query: 129 DEGQNAVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLY 169
D G NA + YS+ E PF ++ +TG I LD E Y
Sbjct: 209 DSGDNARLAYSLLETGAGFPFAINNSTGWIVVASELDREAVDFY 252
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 28/187 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---ATEH 72
S Y + +G T++ + ATD+D+G+ + Y + D+ F + P A
Sbjct: 390 SSHYTVNVNEDRPVGTTVVVISATDEDTGENARITYLM----EDSIPQFRIAPDTGAVTT 445
Query: 73 QGPIQDEGGLSSTATVNIR----------------VTDINDKNPEFQSLPYEFSVPEGQD 116
Q + E +S T + R V+D+ND P+F Y+ SV E
Sbjct: 446 QMELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVSDVNDNAPQFLRDSYQGSVYEDVP 505
Query: 117 GL-AVGRVHATDADEGQNAVVYYS----VPEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
+V +V ATD D G N V+Y+ D F++++ +G +RT + LD E LY
Sbjct: 506 AFTSVLQVSATDRDSGLNGRVFYTFQGGDDGDGDFIIESTSGIVRTLRRLDRENVPLYAL 565
Query: 172 RVFLISK 178
R + + K
Sbjct: 566 RAYAVDK 572
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 75/169 (44%), Gaps = 20/169 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------------AASYFN 65
Y A + +G +++ V A D+D+ ++ Y++ NT +
Sbjct: 291 YSARLNEDAAVGTSVLTVSAVDRDANS--VITYQISSGNTRNRFSITSQSGGGLLSLALP 348
Query: 66 LDPATEHQGPIQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
LD E + +G TA V + VTD N P FQS Y +V E + G V
Sbjct: 349 LDYKLERHYLLTVAASDGTRQDTAQVVVNVTDANTHRPVFQSSHYTVNVNEDRPVGTTVV 408
Query: 122 RVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+ ATD D G+NA + Y + + IP F + +TG + T LDYE Q Y
Sbjct: 409 VISATDEDTGENARITYLMEDSIPQFRIAPDTGAVTTQMELDYEDQVSY 457
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLD----PATEHQGP 75
+++QV ATD+DSG G V Y + + LD P +
Sbjct: 509 SVLQVSATDRDSGLNGRVFYTFQGGDDGDGDFIIESTSGIVRTLRRLDRENVPLYALRAY 568
Query: 76 IQDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D+G + V I+VT D+ND P F+ ++ V E GL V R+ ATD DEG
Sbjct: 569 AVDKGVPARRTPVEIQVTVLDVNDNPPVFERDEFDIFVEENSPIGLVVARITATDPDEGP 628
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
NA + Y + E +IP F +D +G++ LDYE + Y+
Sbjct: 629 NAQIMYQIVEGNIPEVFQLDIFSGELTALADLDYEAKAEYV 669
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 28/169 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT-------------DAASYFNLDPATEHQGP 75
+G+ + ++ ATD D G + Y++++ N A + + + E+
Sbjct: 612 IGLVVARITATDPDEGPNAQIMYQIVEGNIPEVFQLDIFSGELTALADLDYEAKAEYVMV 671
Query: 76 IQDEGG-LSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRVHA 125
+Q L S ATV++R+ D ND +P+ ++ F S P G +GR+ A
Sbjct: 672 VQATSAPLVSRATVHVRLRDANDNSPQLRNFEIVFNNYITNRSGSFPGG----VIGRIPA 727
Query: 126 TDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEKQQLYLERV 173
D D + + ++ V +D +TGD+R + ALD + + RV
Sbjct: 728 RDPDVSDSLTYSFEQGNELNLVLLDPHTGDLRLSPALDNNRPLEAIMRV 776
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 20/130 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLD---------NNTDA----ASYFNLDPATEHQGP 75
+G +++ V+A D DSG + Y LL+ NN+ AS + + +
Sbjct: 196 VGYSVIHVQAIDADSGDNARLAYSLLETGAGFPFAINNSTGWIVVASELDREAVDFYSFG 255
Query: 76 I--QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE 130
+ QD+G ++S+A+V++ V D+ND +PEF Y + E G +V V A D D
Sbjct: 256 VEAQDQGSPPMASSASVSVTVLDVNDNSPEFTQREYSARLNEDAAVGTSVLTVSAVDRD- 314
Query: 131 GQNAVVYYSV 140
N+V+ Y +
Sbjct: 315 -ANSVITYQI 323
>gi|80751169|ref|NP_001032216.1| protocadherin gamma-A2 precursor [Rattus norvegicus]
gi|50512398|gb|AAT77594.1| protocadherin gamma a2 [Rattus norvegicus]
gi|149017316|gb|EDL76367.1| rCG49295, isoform CRA_c [Rattus norvegicus]
Length = 931
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 70/139 (50%), Gaps = 15/139 (10%)
Query: 39 TDKDSGKFG-LVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIND 97
T D K+ LV R LD +A + L A++ P++ SST + ++V D+ND
Sbjct: 184 TGADGNKYPELVLERALDREEEAVHHLVL-VASDRGKPVR-----SSTCRIRVKVLDVND 237
Query: 98 KNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDA 150
P F Y SVPE G + V ATD DEG NA V Y + E +P F + +
Sbjct: 238 NAPVFTQPEYRVSVPENMPVGTRILTVTATDTDEGYNAQVTYFL-ERVPGESTDAFELKS 296
Query: 151 NTGDIRTNKALDYEKQQLY 169
+GDI K+LDYEK + +
Sbjct: 297 TSGDITITKSLDYEKAKFH 315
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 74/162 (45%), Gaps = 21/162 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEY---RLLDNNTDA------------ASYFNLDPATEHQ 73
+G ++ V ATD D G V Y R+ +TDA + + A H+
Sbjct: 257 VGTRILTVTATDTDEGYNAQVTYFLERVPGESTDAFELKSTSGDITITKSLDYEKAKFHE 316
Query: 74 GPI--QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
I QD GL + V + V D+ND PEF SVPE G + + D D
Sbjct: 317 IDIEAQDGPGLLTRTKVIVTVLDVNDNAPEFYMTSATASVPEDAPLGTVIALFNVHDRDS 376
Query: 131 GQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
GQNAVV S+PE +PF ++ + + + T +ALD E+ Y
Sbjct: 377 GQNAVVTCSLPEMLPFKLERSVDNYYRLVTTRALDREQFSFY 418
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 15/131 (11%)
Query: 46 FGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSL 105
+ LV R LD + S++N+ + QG LS+ A + ++V DIND P F
Sbjct: 402 YRLVTTRALDR--EQFSFYNITLRAKDQG----SPSLSTDAHLLLQVADINDNPPSFSRG 455
Query: 106 PYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDI----PF----VVDANTGDIR 156
Y +PE G ++ V A D D NA V YS+ ED P ++++TG +
Sbjct: 456 AYSAYIPENNPRGTSIFSVLAYDPDSNDNAHVTYSLAEDTFQGAPLSSYISINSDTGVLY 515
Query: 157 TNKALDYEKQQ 167
++ DYE+ Q
Sbjct: 516 ALRSFDYEQFQ 526
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 81/188 (43%), Gaps = 36/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA---SYFNLDPAT----- 70
Y A + + G ++ V A D DS V Y L ++ A SY +++ T
Sbjct: 457 YSAYIPENNPRGTSIFSVLAYDPDSNDNAHVTYSLAEDTFQGAPLSSYISINSDTGVLYA 516
Query: 71 ------EHQGPIQ------DEGG--LSSTATVNIRVTDINDKNPE--FQSLP------YE 108
E +Q D G LSS ++++ + D ND PE + +LP E
Sbjct: 517 LRSFDYEQFQDLQLWVIAVDSGKPPLSSNVSLSLFLVDQNDNMPEILYPALPTDGSTGVE 576
Query: 109 FSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL---D 162
+ + G V +V A D D GQNA + Y + E F V +TG++RT +AL D
Sbjct: 577 LAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRD 636
Query: 163 YEKQQLYL 170
KQ L +
Sbjct: 637 ALKQSLVV 644
Score = 35.4 bits (80), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP 145
+V + V D+ND P F E + E G + A DAD G+N + Y + +
Sbjct: 118 SVEVEVIDVNDNAPRFGVEEPELKISETTTPGFRIPLKSAHDADVGENTLQKYKLNSNDH 177
Query: 146 FVVDANTG-------DIRTNKALDYEKQQLY 169
F +D TG ++ +ALD E++ ++
Sbjct: 178 FSLDVRTGADGNKYPELVLERALDREEEAVH 208
>gi|402910719|ref|XP_003918004.1| PREDICTED: protocadherin-11 X-linked-like [Papio anubis]
Length = 1054
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 75/162 (46%), Gaps = 26/162 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------------ 77
G+ L +V ATD D+G + Y L DA F+LD T ++
Sbjct: 511 GIQLTKVSATDADTGPNAEINYLL---GPDAPPEFSLDRRTGMLTVVKKLDREKEEKYFF 567
Query: 78 -----DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--QDGLAVGRVHATDA 128
D G L+S TV + V D ND P F Y F VPE + G VG + TD
Sbjct: 568 TVLAKDNGVPPLTSNVTVFVSVIDQNDNTPTFTHNEYNFYVPENLPKHG-TVGLITVTDP 626
Query: 129 DEGQNAVVYYSV-PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D G+N+ V S+ E+ F +D+ TG IR N + D EKQ+ Y
Sbjct: 627 DYGENSAVTLSILDENDGFTIDSQTGVIRPNISFDREKQESY 668
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 10/98 (10%)
Query: 78 DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
++GG SSTA + + VTD ND +P F+ E S+PE G +V ++HATDAD G+N
Sbjct: 251 EDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGTSVTQLHATDADIGEN 310
Query: 134 AVVYYSVPEDIP------FVVDANTGDIRTNKALDYEK 165
A +++S + F ++ TG I + LD E+
Sbjct: 311 ARIHFSFSNLVSNIAKRLFHLNTTTGLITIKEPLDREE 348
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+ +A + I+V D ND P F S+PE G+ + +V ATDAD G NA + Y +
Sbjct: 475 LNQSAMLFIKVKDENDNAPVFTQSLVTVSIPENNSPGIQLTKVSATDADTGPNAEINYLL 534
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLYLERVF 174
D P F +D TG + K LD EK++ Y V
Sbjct: 535 GPDAPPEFSLDRRTGMLTVVKKLDREKEEKYFFTVL 570
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 48/101 (47%), Gaps = 11/101 (10%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLP----YEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
SS+A V I V D+ND P F P YE +P G V +V A D D G NA V Y
Sbjct: 683 SSSAKVTINVVDVNDNKPVFIVPPSNYSYELVLPSTDPGTVVFQVIAVDNDTGMNAEVRY 742
Query: 139 SV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
S+ D+ F ++ TG+I + D L L RV +
Sbjct: 743 SIVGENTRDL-FEINETTGNIIMKEKCDV--TDLGLHRVLV 780
>gi|358413182|ref|XP_596806.4| PREDICTED: protocadherin beta-8 [Bos taurus]
gi|359067547|ref|XP_002689300.2| PREDICTED: protocadherin beta-8 [Bos taurus]
Length = 788
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV- 140
S TA + I V DIND PEF+ Y +PE G V +V ATD D G N + YS+
Sbjct: 223 SGTAHIYIEVVDINDNAPEFEQPFYRVKIPEDSPKGFLVVKVSATDVDTGVNGEISYSLS 282
Query: 141 --PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
EDI F ++A TG+IR K LD+E Q Y
Sbjct: 283 QASEDISKTFEINAMTGEIRLKKQLDFETTQSY 315
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 71/175 (40%), Gaps = 26/175 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
FY + G +++V ATD D+G G + Y L + D + F ++ T G I+
Sbjct: 246 FYRVKIPEDSPKGFLVVKVSATDVDTGVNGEISYSLSQASEDISKTFEINAMT---GEIR 302
Query: 78 --------------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG 117
D G LS TV I+V D+ND PE +PE
Sbjct: 303 LKKQLDFETTQSYEVNIEAIDTGSLSGKCTVLIQVVDVNDNAPEVTMSALTGQIPENSPE 362
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIPFVVDA---NTGDIRTNKALDYEKQQLY 169
V +D D +N V SV D+PF++ + N + T + LD E + Y
Sbjct: 363 TVVAVFSVSDLDSEENGKVSCSVQYDLPFLLKSSMENFYTLVTERPLDRETRAEY 417
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 75/187 (40%), Gaps = 35/187 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR-------------LLDNNTDAASYFN 65
Y R+ + + + V ATD D+G V Y L+ N D F
Sbjct: 456 YTLWVRENNSPALHIGSVSATDTDAGANAQVTYSLLPPPDPLVPLASLVSINPDNGHLFA 515
Query: 66 LDP-------ATEHQGPIQDEG--GLSSTATVNIRVTDINDKNP------EFQSLPYEFS 110
L A E + D G LSS A V + V D ND P + S P
Sbjct: 516 LTSLDYEALRAFEFRVGATDRGSPALSSQALVRVLVADANDNAPFVLYPLQNASAPCTEL 575
Query: 111 VPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL---DY 163
VP + G V +V A D D GQNA + Y + E F V A+ G++RT + L D
Sbjct: 576 VPRAAEPGYLVTKVVAVDGDAGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDT 635
Query: 164 EKQQLYL 170
KQ+L +
Sbjct: 636 PKQRLVV 642
Score = 42.7 bits (99), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 46 FGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSL 105
+ LV R LD T A +N+ A G + L + + + V+D+ND P F
Sbjct: 401 YTLVTERPLDRETRAE--YNIIIAVTDLGTPK----LKTEHNITVLVSDVNDNAPTFTQT 454
Query: 106 PYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS 139
Y V E L +G V ATD D G NA V YS
Sbjct: 455 SYTLWVRENNSPALHIGSVSATDTDAGANAQVTYS 489
>gi|57043447|ref|XP_544296.1| PREDICTED: protocadherin beta-1 [Canis lupus familiaris]
Length = 818
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 73/173 (42%), Gaps = 37/173 (21%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------ 76
LG A D D G GL Y L N +YF+L QGP
Sbjct: 148 LGSRFPLQSAQDLDVGLNGLQNYTLSPN-----AYFHLHTRFRSQGPKYAELVLDKPLDR 202
Query: 77 --QDEGGLSSTAT------------VNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVG 121
Q E L+ TA + + V D+ND P+F L Y VPE +G V
Sbjct: 203 EEQPEVNLTITAVDGGSPPKSGIAHIRVEVLDVNDHVPQFSRLVYRVQVPENSANGSLVA 262
Query: 122 RVHATDADEGQNAVVYYSV---PEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
V ATD DEG N + YS+ PE I F +D+ TG++R LD+E + Y
Sbjct: 263 TVSATDLDEGSNKEITYSLAQNPETILQTFQIDSQTGEVRLRGPLDFEAIETY 315
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 17/141 (12%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDI 95
VK T ++S + LV R LD + S +N+ GP L + + + ++DI
Sbjct: 394 VKPTFRNS--YSLVTDRGLDR--EEVSGYNVTVVAMDTGP----PSLFTETVIEVLISDI 445
Query: 96 NDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV--PEDIPFVV---- 148
ND P FQ Y +V E + +G+VHA D D G+NA V Y++ P+ V
Sbjct: 446 NDNPPVFQEDSYILTVRENNSPAIFIGKVHAEDLDLGENAQVTYTLLPPKSGDLAVFAYI 505
Query: 149 --DANTGDIRTNKALDYEKQQ 167
+++ G + + +DYE Q
Sbjct: 506 SINSDNGKLYALRTIDYEAIQ 526
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 68/176 (38%), Gaps = 25/176 (14%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQ 73
L Y + G + V ATD D G + Y L N F +D T +
Sbjct: 245 LVYRVQVPENSANGSLVATVSATDLDEGSNKEITYSLAQNPETILQTFQIDSQTGEVRLR 304
Query: 74 GPI--------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG---QD 116
GP+ D GGLS+ + V + V D+ND PE +PE Q
Sbjct: 305 GPLDFEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVTVSSVSSPLPEDSPLQT 364
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDA---NTGDIRTNKALDYEKQQLY 169
+A+ + D G + + ED+PF V N+ + T++ LD E+ Y
Sbjct: 365 VVALFSIRDRDIQVGGKIICFLR--EDLPFAVKPTFRNSYSLVTDRGLDREEVSGY 418
Score = 35.8 bits (81), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 68/175 (38%), Gaps = 32/175 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP--- 75
Y R+ + + + +V A D D G+ V Y LL + + F G
Sbjct: 457 YILTVRENNSPAIFIGKVHAEDLDLGENAQVTYTLLPPKSGDLAVFAYISINSDNGKLYA 516
Query: 76 --------IQD--------EGG---LSSTATVNIRVTDINDKNP------EFQSLPYEFS 110
IQD +GG LSS TV + V D ND P + + P
Sbjct: 517 LRTIDYEAIQDFQFVVKATDGGFLSLSSQVTVRVVVLDDNDNRPMILYPLQNGTSPCNDL 576
Query: 111 VPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKAL 161
VP D G V +V A D D G+N+ + Y + + F V G+IRT + +
Sbjct: 577 VPRSADVGYLVTKVVAVDGDSGRNSWLSYHLLKATDPGLFSVQQQNGEIRTLRQI 631
>gi|296485264|tpg|DAA27379.1| TPA: protocadherin beta 16-like [Bos taurus]
Length = 1591
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV- 140
S TA + I V DIND PEF+ Y +PE G V +V ATD D G N + YS+
Sbjct: 223 SGTAHIYIEVVDINDNAPEFEQPFYRVKIPEDSPKGFLVVKVSATDVDTGVNGEISYSLS 282
Query: 141 --PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
EDI F ++A TG+IR K LD+E Q Y
Sbjct: 283 QASEDISKTFEINAMTGEIRLKKQLDFETTQSY 315
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 73/176 (41%), Gaps = 25/176 (14%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------ 70
L Y + +G ++ V A+D DSG +G + Y + D + ++P T
Sbjct: 1036 LLYKVHIPENSPVGSLVVTVSASDVDSGLYGKISYTFFQPSEDISKTLEVNPKTGEIRLR 1095
Query: 71 -----------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ---D 116
E D GGLS T+ ++V D+ND PE +PE
Sbjct: 1096 KQVDFETVFSYEVDVKATDGGGLSGKCTLLLQVVDVNDNPPEVTVSALTSPIPENSPEIT 1155
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
LAV R+ D D G+N +P+ +PF++ + + + T ALD E Q Y
Sbjct: 1156 ALAVFRIK--DRDSGENGKTVCFIPDHLPFLLKPSVENFYILMTEGALDRESQAEY 1209
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 71/175 (40%), Gaps = 26/175 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
FY + G +++V ATD D+G G + Y L + D + F ++ T G I+
Sbjct: 246 FYRVKIPEDSPKGFLVVKVSATDVDTGVNGEISYSLSQASEDISKTFEINAMT---GEIR 302
Query: 78 --------------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG 117
D G LS TV I+V D+ND PE +PE
Sbjct: 303 LKKQLDFETTQSYEVNIEAIDTGSLSGKCTVLIQVVDVNDNAPEVTMSALTGQIPENSPE 362
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIPFVVDA---NTGDIRTNKALDYEKQQLY 169
V +D D +N V SV D+PF++ + N + T + LD E + Y
Sbjct: 363 TVVAVFSVSDLDSEENGKVSCSVQYDLPFLLKSSMENFYTLVTERPLDRETRAEY 417
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 85 TATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV--- 140
TA V I V DIND P+FQ L Y+ +PE G V V A+D D G + Y+
Sbjct: 1016 TAQVRIEVVDINDNAPQFQQLLYKVHIPENSPVGSLVVTVSASDVDSGLYGKISYTFFQP 1075
Query: 141 PEDIPFVVDAN--TGDIRTNKALDYE 164
EDI ++ N TG+IR K +D+E
Sbjct: 1076 SEDISKTLEVNPKTGEIRLRKQVDFE 1101
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 75/187 (40%), Gaps = 35/187 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR-------------LLDNNTDAASYFN 65
Y R+ + + + V ATD D+G V Y L+ N D F
Sbjct: 456 YTLWVRENNSPALHIGSVSATDTDAGANAQVTYSLLPPPDPLVPLASLVSINPDNGHLFA 515
Query: 66 LDP-------ATEHQGPIQDEG--GLSSTATVNIRVTDINDKNP------EFQSLPYEFS 110
L A E + D G LSS A V + V D ND P + S P
Sbjct: 516 LTSLDYEALRAFEFRVGATDRGSPALSSQALVRVLVADANDNAPFVLYPLQNASAPCTEL 575
Query: 111 VPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL---DY 163
VP + G V +V A D D GQNA + Y + E F V A+ G++RT + L D
Sbjct: 576 VPRAAEPGYLVTKVVAVDGDAGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDT 635
Query: 164 EKQQLYL 170
KQ+L +
Sbjct: 636 PKQRLVV 642
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 75/187 (40%), Gaps = 35/187 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR-------------LLDNNTDAASYFN 65
Y R+ + + + V ATD D+G V Y L+ N D F
Sbjct: 1248 YTLWVRENNSPALHIGSVSATDTDAGANAQVTYSLLPPPDPLVPLASLVSINPDNGHLFA 1307
Query: 66 LDP-------ATEHQGPIQDEG--GLSSTATVNIRVTDINDKNP------EFQSLPYEFS 110
L A E + D G LSS A V + V D ND P + S P
Sbjct: 1308 LTSLDYEALRAFEFRVGATDRGSPALSSQALVRVLVADANDNAPFVLYPLQNASAPCTEL 1367
Query: 111 VPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL---DY 163
VP + G V +V A D D GQNA + Y + E F V A+ G++RT + L D
Sbjct: 1368 VPRAAEPGYLVTKVVAVDGDAGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDA 1427
Query: 164 EKQQLYL 170
KQ+L +
Sbjct: 1428 PKQRLVV 1434
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 46 FGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSL 105
+ LV R LD T A +N+ A G + L + + + V+D+ND P F
Sbjct: 401 YTLVTERPLDRETRAE--YNIIIAVTDLGTPK----LKTEHNITVLVSDVNDNAPTFTQT 454
Query: 106 PYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS 139
Y V E L +G V ATD D G NA V YS
Sbjct: 455 SYTLWVRENNSPALHIGSVSATDTDAGANAQVTYS 489
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS 139
L + + + V+D+ND P F Y V E L +G V ATD D G NA V YS
Sbjct: 1223 LKTEHNITVLVSDVNDNAPAFTQTSYTLWVRENNSPALHIGSVSATDTDAGANAQVTYS 1281
>gi|242024529|ref|XP_002432680.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518150|gb|EEB19942.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 1860
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 74/167 (44%), Gaps = 34/167 (20%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDA--------------------------ASYFNL 66
+M+V+A D D G+ G + Y N TD + Y L
Sbjct: 1238 VMKVRANDADEGENGRITYHFKVNETDVQETDEFFIHPDTGDLRTKIILDREVKSKYELL 1297
Query: 67 DPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHA 125
A +H P E T + D ND +PEF+S Y+FSV E G+ +G+V A
Sbjct: 1298 LVAKDHGSPTWFETLRLLTVLL----VDTNDNDPEFESERYDFSVSENLPVGVTIGQVVA 1353
Query: 126 TDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D DEG++A +YYS+ E+ F +D TG I N + D E Q Y
Sbjct: 1354 VDKDEGKHARIYYSIISGNEENCFTIDRTTGKILANVSFDREFQDQY 1400
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 80/175 (45%), Gaps = 34/175 (19%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE--------HQGPI-------- 76
++QV A D D G +G V Y ++ N D F +D T H P
Sbjct: 1132 IVQVHAMDPDDGSYGTVSYSIVGGNLD--DVFRIDSETGILYPKKSLHGQPRHFHLVVEG 1189
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEF---QSLPYEFSVPEGQDGLA---VGRVHATDADE 130
+D G L+ ATV+I + ++N P F SL VPE GLA V +V A DADE
Sbjct: 1190 RDAGDLTDRATVDIDILNVNQNKPTFIMPASLNATVEVPENA-GLADYLVMKVRANDADE 1248
Query: 131 GQNAVVYYS-------VPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G+N + Y V E F + +TGD+RT LD E + Y + L++K
Sbjct: 1249 GENGRITYHFKVNETDVQETDEFFIHPDTGDLRTKIILDREVKSKY--ELLLVAK 1301
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 69/160 (43%), Gaps = 32/160 (20%)
Query: 37 KATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ------------------- 77
K T D + +EY ++ N + + F+LDP H G I
Sbjct: 588 KITAHDKDETSQIEYYIVTGNVN--NLFSLDP---HSGEITVTDKKNGLNMTGVSNNVIE 642
Query: 78 -----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEG 131
+G SS ATV+I V D+N+ P FQ Y ++ E V V A D+D G
Sbjct: 643 LVVQATDGKYSSNATVSITVNDVNNNAPVFQESQYHATILENSMRNTEVQSVIAHDSDSG 702
Query: 132 QNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLY 169
NA V Y + + F ++ +TG + ++ LDY++ Y
Sbjct: 703 SNAEVKYQILKGGFGDFHINEDTGVVYVSQKLDYDRHSNY 742
Score = 42.4 bits (98), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYY 138
+G ++TA I+V D+ + P F S + G V VHA D D G + Y
Sbjct: 197 DGKHNATAVTEIKVVDVQNTPPVFDSSFVGVVQENAEIGTLVLTVHARDGDIGNPREIVY 256
Query: 139 SV---PEDIPFVVDANTGDIRTNKALDYE 164
+ P+D F++D TG++RT K LD E
Sbjct: 257 ELVTNPQDY-FLLDGKTGELRTAKPLDKE 284
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 77/181 (42%), Gaps = 32/181 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNL----------DP 68
Y A + +G + +V ATD D+ +G V Y L+ +++ F L +P
Sbjct: 1008 YKASVPENSFIGTLITKVTATDADAESYGQVTYSLVGEHSND---FTLGLENGELRVANP 1064
Query: 69 ATEHQGPIQD-------------EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
A + ++ + + + V+I + D+ND P F Y+ ++ E
Sbjct: 1065 AILDREDVKKITVEIVASDGAPPDTRRAVSVPVHITILDVNDNAPSFVHKNYKATIVENI 1124
Query: 116 D---GLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D + +VHA D D+G V YS+ D F +D+ TG + K+L + + +
Sbjct: 1125 DLNPPAKIVQVHAMDPDDGSYGTVSYSIVGGNLDDVFRIDSETGILYPKKSLHGQPRHFH 1184
Query: 170 L 170
L
Sbjct: 1185 L 1185
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 11/90 (12%)
Query: 86 ATVNIRVTDINDKNPEF------QSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYY 138
T+ I + D+ND P F ++ Y+ + EGQ + V A DAD + + YY
Sbjct: 881 GTLTITIIDVNDHYPTFDEPWTVENPRYQIDLIEGQNEDTVVATFTAEDAD---STIAYY 937
Query: 139 SVPEDIPFV-VDANTGDIRTNKALDYEKQQ 167
+ + PF +D +G +R K +DYE+++
Sbjct: 938 DIKPESPFFKIDNTSGVVRLKKEVDYEREK 967
Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
SS+A V + V ++ND +P F Y+ SVPE G + +V ATDAD V YS+
Sbjct: 983 FSSSAEVIVNVINVNDNDPVFSQTEYKASVPENSFIGTLITKVTATDADAESYGQVTYSL 1042
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 49/112 (43%), Gaps = 18/112 (16%)
Query: 76 IQDEGGLSSTATVNIRVTDINDKNPEFQSL-----PYEFSVPE-GQDGLAVGRVHATDAD 129
I D SSTATV + +TD+ND P F+++ Y +V E G V + A D D
Sbjct: 422 ISDVPERSSTATVTVAITDVNDNAPYFENVDPRTGSYSATVSETASPGELVTSILAKDKD 481
Query: 130 EGQ---NAVVY---------YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G +VY +SV VV A + + LDYE + +Y
Sbjct: 482 SGSYGVKGIVYQLEGNGSEKFSVNSKTGVVVVAKCENPGKPQCLDYETKNIY 533
Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 61/153 (39%), Gaps = 36/153 (23%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH-- 72
DS F G + ++ E+G ++ V A D D G + Y L+ N D YF LD T
Sbjct: 221 DSSFVGVV-QENAEIGTLVLTVHARDGDIGNPREIVYELVTNPQD---YFLLDGKTGELR 276
Query: 73 ------QGPIQDEGGL---------------------SSTATVNIRVTDINDKNPEFQSL 105
+ ++D G+ +T I + DIND+ P F
Sbjct: 277 TAKPLDKESLEDSTGVLTLKIRAHEVENGIVLNDSLSVTTKQATITIKDINDEPPRFNER 336
Query: 106 PYEFSVPEG-QDGLAVGRVH--ATDADEGQNAV 135
Y +PE Q + R++ TD D G N++
Sbjct: 337 EYFVEIPENFQSNTPLPRLNMSVTDPDVGNNSL 369
>gi|51092277|ref|NP_932785.1| protocadherin alpha 2 precursor [Mus musculus]
gi|13876258|gb|AAK26049.1| protocadherin alpha 2 [Mus musculus]
gi|162318310|gb|AAI56387.1| Protocadherin alpha 2 [synthetic construct]
gi|225000988|gb|AAI72669.1| Protocadherin alpha 2 [synthetic construct]
Length = 948
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 19/147 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGG---LSSTATVN 89
+ V+ +D+ S LV + LD DA L + +GG L+ T +
Sbjct: 179 FLDVQTSDELSQSLFLVLGKSLDREEDAEVKLLL---------VATDGGKPELTGTVQIL 229
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVPEDIP--- 145
I+V D+ND P F Y+ + E +G V +++A+DADEG N+ + YS+ D+
Sbjct: 230 IKVLDVNDNEPTFPQSVYKVQLLENTANGTLVMKLNASDADEGSNSEIVYSLGSDVSSTT 289
Query: 146 ---FVVDANTGDIRTNKALDYEKQQLY 169
F +D N+G++RT LDYE++ Y
Sbjct: 290 RTKFQIDPNSGEVRTKGELDYEERTSY 316
Score = 42.7 bits (99), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 28/167 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVE--------YRLLDNNTDAASYFNLDPATEHQGP----- 75
LG + + +D+DSG G V ++L+ + S LD A + +
Sbjct: 365 LGAVIALISVSDRDSGVNGQVTCSLSPHVPFKLVSTFKNYYSLV-LDSALDREATADYKV 423
Query: 76 --IQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
+GG L +TA+V++ V D+ND P F Y V E G + V A DAD
Sbjct: 424 MVTARDGGSPSLRATASVSVEVADVNDNAPVFAQPEYTVFVKENNPPGAHIFTVSAMDAD 483
Query: 130 EGQNAVVYYSVPED-------IPFV-VDANTGDIRTNKALDYEKQQL 168
+NA+V YS+ E +V V A +G + + LD+E+ +L
Sbjct: 484 AQENALVSYSLVERRVGERLLSSYVSVHAESGKVFALQPLDHEELEL 530
Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 60/141 (42%), Gaps = 27/141 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLDPAT-----------------E 71
G +M++ A+D D G + Y L D ++ + F +DP + E
Sbjct: 258 GTLVMKLNASDADEGSNSEIVYSLGSDVSSTTRTKFQIDPNSGEVRTKGELDYEERTSYE 317
Query: 72 HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQ----SLPYEFSVPEGQDGLAVGRVHA 125
Q D+G +S +++++ DIND PE SLP + + P G + +
Sbjct: 318 IQVIASDKGTPAMSGHCKISVKLVDINDNTPEVSITSLSLPVQENAPLGA---VIALISV 374
Query: 126 TDADEGQNAVVYYSVPEDIPF 146
+D D G N V S+ +PF
Sbjct: 375 SDRDSGVNGQVTCSLSPHVPF 395
Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 70/186 (37%), Gaps = 50/186 (26%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------------NTDAASYFN 65
Y ++ + G + V A D D+ + LV Y L++ + ++ F
Sbjct: 460 YTVFVKENNPPGAHIFTVSAMDADAQENALVSYSLVERRVGERLLSSYVSVHAESGKVFA 519
Query: 66 LDPA-------TEHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
L P + Q +D G L S T+ + V D ND P +P+G
Sbjct: 520 LQPLDHEELELLQFQVTARDAGVPALGSNVTLQVFVLDENDNAP--------LLLPQGAV 571
Query: 117 GLA----------------VGRVHATDADEGQNAVVYYSVPEDIP----FVVDANTGDIR 156
G+ V +V A DAD G NA + Y + + F V TG+I
Sbjct: 572 GVGGSVSELVPRSVGSGHVVTKVRAVDADSGYNAWLSYELQSTVGMRSLFRVGLYTGEIS 631
Query: 157 TNKALD 162
T +ALD
Sbjct: 632 TTRALD 637
>gi|74203863|dbj|BAE28530.1| unnamed protein product [Mus musculus]
Length = 459
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 29/179 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------E 71
Y A+ + G +++V A D D G R+L N YF+++P T +
Sbjct: 151 YEAIVPEMSPEGTFVIKVTANDADDPSTGY-HARILYNLERGQPYFSVEPTTGVIRISSK 209
Query: 72 HQGPIQDE--------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD- 116
+QD G LS T TV+I+++DIND P F+ Y F++ E
Sbjct: 210 MDRELQDTYCVIIQAKDMLGQPGALSGTTTVSIKLSDINDNKPIFKESFYRFTISESAPI 269
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPED----IPFVVDANT--GDIRTNKALDYEKQQLY 169
G ++G++ A D D G+NA + YS+ +D ++D +T G + K +D+E+Q Y
Sbjct: 270 GKSIGKIMAYDDDIGENAEMEYSIEDDDSKIFDIIIDNDTQEGIVILKKKVDFEQQSYY 328
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
IRV DIND P F PYE VPE +G V +V A DAD+ G +A + Y++ P
Sbjct: 134 IRVLDINDNEPRFLDEPYEAIVPEMSPEGTFVIKVTANDADDPSTGYHARILYNLERGQP 193
Query: 146 -FVVDANTGDIRTNKALDYEKQQLY 169
F V+ TG IR + +D E Q Y
Sbjct: 194 YFSVEPTTGVIRISSKMDRELQDTY 218
Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
+ST + ++V D D+ P F Y +PEG+ G VG V ATD D Q+ + YY
Sbjct: 350 ASTTYIKVQVED-EDEPPVFLLPYYILEIPEGKPYGTIVGTVSATDPDRRQSPMRYYLTG 408
Query: 142 EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ F ++ N G I T LD E Y
Sbjct: 409 SKM-FDINDN-GTIITTNMLDREVSAWY 434
>gi|281347880|gb|EFB23464.1| hypothetical protein PANDA_011223 [Ailuropoda melanoleuca]
Length = 577
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 53/98 (54%), Gaps = 8/98 (8%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYY 138
GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG++ A DAD G NA + Y
Sbjct: 33 GGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVGKIKANDADTGSNADMTY 92
Query: 139 SVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
S+ I + G + K L+YEK++ Y
Sbjct: 93 SIINGDGIGIFSISTDKETREGILSLKKPLNYEKKKSY 130
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 140 HLDFRFSHLGPFKD------ATMLKIIVGDV-DEPPLFSMPSYVMEVYENAKIGTVVGTV 192
Query: 124 HATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D + V Y YS +D F +DANTG IRT K LD E+ Y
Sbjct: 193 LAQDPDSANSLVRYFIDYSAEDDRCFNIDANTGTIRTTKVLDREETPWY 241
Score = 35.4 bits (80), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 53/127 (41%), Gaps = 23/127 (18%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPI- 76
++G + V A D DS LV Y +D + + FN+D T + P
Sbjct: 184 KIGTVVGTVLAQDPDSAN-SLVRY-FIDYSAEDDRCFNIDANTGTIRTTKVLDREETPWY 241
Query: 77 --------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
D GL S TV IR+ D+ND PE + Y+ V E + G + + ATD
Sbjct: 242 NITVAASENDNPGLLSHVTVGIRILDVNDNPPEL-AREYDIVVCENSKPGQVIHTISATD 300
Query: 128 ADEGQNA 134
D+ N
Sbjct: 301 KDDFANG 307
>gi|312078374|ref|XP_003141710.1| hypothetical protein LOAG_06126 [Loa loa]
Length = 2498
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 86/165 (52%), Gaps = 29/165 (17%)
Query: 33 LMQVKATDKD--SGKFGL--VEYRLLDNNTDAASYFNLDPAT-----------------E 71
+++V+A DKD S ++G+ V ++++ N S+F +D T E
Sbjct: 984 IIKVEAEDKDDLSNRYGITNVHFKIISGN--PQSFFAIDSKTGYIVTRGKRRLDHETQKE 1041
Query: 72 HQGPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATD 127
H ++ D+G L +T V I +TD+ND P F+ Y F+VP G G + R+ A D
Sbjct: 1042 HVIVVEFCDQGDPKLCTTVPVVITITDLNDNPPSFKQTTYNFNVPAGDIG-ELCRIFAID 1100
Query: 128 ADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLE 171
ADEGQNA++ Y+ E P F +D++ I ++ + E QL ++
Sbjct: 1101 ADEGQNALLLYNFTEADPRFSIDSDGRIITSDPLKENESYQLTVK 1145
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDADEGQNAV 135
+D L +T VN+ VTD ND P F+ Y V + + +V A+DAD N+
Sbjct: 66 KDATNLETTVMVNLFVTDQNDAGPIFEKDEYRAEVKQNVPPFTTILQVQASDADVALNSQ 125
Query: 136 VYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYL 170
+YYS+ E + F+VD +G IR ++L +L L
Sbjct: 126 IYYSLVEWSLDFMVDPISGAIRNLRSLQSGTYELTL 161
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 73 QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEG 131
Q + G + + V I++ D ND P F LPYE ++P + G V V A DADEG
Sbjct: 1879 QARLLSGGNNRAQSIVTIKIEDRNDCQPHFIGLPYEPTIPRDVKPGYKVISVKAIDADEG 1938
Query: 132 QNAVVYYSV 140
N + Y +
Sbjct: 1939 FNGAIRYKL 1947
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY-Y 138
G+ + + V IRV DI+D P F L Y SV E G + +V A D D N + Y
Sbjct: 2090 GVRAESYVVIRVHDISDTAPHFTQLLYTISVSESTAVGSELLKVEAIDPDIDDNYISYGI 2149
Query: 139 SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ P +D G I K LDYE ++L+
Sbjct: 2150 TGPNASVLSMDPRNGAISLMKPLDYETERLF 2180
Score = 38.9 bits (89), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 66/167 (39%), Gaps = 40/167 (23%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLL----------------------DNNTDAASYFNLD 67
G ++ VKA D D G G + Y+L D N D+ S L+
Sbjct: 1924 GYKVISVKAIDADEGFNGAIRYKLKTSTNYFDINKYDGKIVISQSFEDANFDSVS---LE 1980
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTD-----INDKNPEFQSLPYEFSVPEGQDGLAVGR 122
E QG E LSS+ V I + D I ++ E L E + P G +V
Sbjct: 1981 VIAEDQG----EPSLSSSTHVVIHIVDRSIPIIGNRYQEAHIL--ENAAP----GSSVTN 2030
Query: 123 VHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
VHA G+ S +D F +D +TG I +KALD E Y
Sbjct: 2031 VHAISVVGGRIGYAIKSGNDDNRFKIDFDTGMISVHKALDREIHAFY 2077
Score = 35.4 bits (80), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 52/132 (39%), Gaps = 24/132 (18%)
Query: 19 YGAMARDKHELGVTLMQVKAT--------------DKDSGKFGLVEY--RLLDNNTDAAS 62
Y R+ GVTLM V+A D SG + E R+ +N
Sbjct: 2328 YSTSIRENRPTGVTLMTVRAQSGIPPLRYSFNGCYDNCSGVLNIDETTGRIYTSNP---- 2383
Query: 63 YFNLDPATEHQGPIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLA 119
FN + HQ I D G + T+ + V D ND P F S E SVP + G +
Sbjct: 2384 -FNYETQHVHQFVIMVTDAGNRCAFTTLMLNVIDENDNIPHFISSNIETSVPVASRPGES 2442
Query: 120 VGRVHATDADEG 131
V V A D D G
Sbjct: 2443 VLMVFAFDCDVG 2454
>gi|313226181|emb|CBY21324.1| unnamed protein product [Oikopleura dioica]
Length = 2431
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 34/179 (18%)
Query: 25 DKHELGVTLMQ----------VKATDKDSGKFGLVEYRLLDNNTDAASYFNLD------- 67
+K E+ VT+ + V A D D G G + Y+L + + A YF +D
Sbjct: 503 EKREIKVTIAEDSAVNSIITTVIAQDADEGPNGAISYQLSRVDPNEAGYFLIDTYDGTIR 562
Query: 68 ----------PATEHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
P E + +D G L + ATV I V D+ND P F+S + V E +
Sbjct: 563 LGKPLDRETTPCYELEIEARDHGTPSLYAKATVMITVLDVNDNAPHFESSKKRYYVREDK 622
Query: 116 D-GLAVGRVHATDADEGQNA-VVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D G + ++ A D D G NA + Y+ +P + F +D+ TG++ +ALD+EK++ Y
Sbjct: 623 DPGTIIAKIEADDRDIGDNANLEYFLLPNRETNNMFYLDSATGELELRQALDFEKKRNY 681
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 19/141 (13%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIND 97
A DK++G+ LV ++LD L + Q D GGLS + + + D+ND
Sbjct: 338 AIDKNTGRITLV--KILDRE--------LIDHYKFQVKATDGGGLSDIVDIVVNLIDVND 387
Query: 98 KNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV------PEDIP--FVV 148
P+F Y V E + G +G++ ATD+D G NA V Y++ PE++ F +
Sbjct: 388 SPPKFSQSSYSVKVAEDSRPGQIIGKIAATDSDSGDNARVSYTIGEGTIAPEEVNKLFKL 447
Query: 149 DANTGDIRTNKALDYEKQQLY 169
+ TG I + LD E+++ Y
Sbjct: 448 NEETGVISLAENLDNEQKKYY 468
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Query: 48 LVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPY 107
++ +R LD ASY A + Q PI S A V + + D ND P F
Sbjct: 137 IMTHRELDRE-QIASYKFYVIAKDSQSPIH-----QSQAKVEVSILDDNDSPPVFAKDEL 190
Query: 108 EFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEK 165
E + EG G V V ATDADEG+N V Y++ D F VDA +G+I + LD+E
Sbjct: 191 EVHLSEGTKIGTKVISVKATDADEGENGKVTYALMNDKDTFAVDATSGNISLIRDLDFEV 250
Query: 166 QQLYLERV 173
+ + RV
Sbjct: 251 NRKFELRV 258
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 72/157 (45%), Gaps = 20/157 (12%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNN----TDAASY---------FNLDPATEHQG 74
++G ++ VKATD D G+ G V Y L+++ DA S F ++ E +
Sbjct: 199 KIGTKVISVKATDADEGENGKVTYALMNDKDTFAVDATSGNISLIRDLDFEVNRKFELRV 258
Query: 75 PIQDEGGL--SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE- 130
QD G S TV + + D+ND P F P V E + G V A+D D+
Sbjct: 259 RAQDHGRRRQESIVTVTVVIVDLNDNAPHFNINPLVARVKEDAKIGHTVTFAIASDKDDP 318
Query: 131 -GQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYE 164
N + Y++ P +PF +D NTG I K LD E
Sbjct: 319 NSPNGRLSYTLISPNLLPFAIDKNTGRITLVKILDRE 355
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 62/168 (36%), Gaps = 28/168 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G + ++ ATD DSG V Y + + L E G I
Sbjct: 408 GQIIGKIAATDSDSGDNARVSYTIGEGTIAPEEVNKLFKLNEETGVISLAENLDNEQKKY 467
Query: 77 -------QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
+D G S A V I V D+ND P F+ + ++ E + V A
Sbjct: 468 YSFEIIAKDHGIPQKSDRAKVEINVMDVNDNPPVFEKREIKVTIAEDSAVNSIITTVIAQ 527
Query: 127 DADEGQNAVVYYSVPEDIP-----FVVDANTGDIRTNKALDYEKQQLY 169
DADEG N + Y + P F++D G IR K LD E Y
Sbjct: 528 DADEGPNGAISYQLSRVDPNEAGYFLIDTYDGTIRLGKPLDRETTPCY 575
Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 16/100 (16%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV-------- 140
I V D+ND P F Y+F V E VG V TD D A + S+
Sbjct: 64 IHVNDVNDNEPVFGQTEYKFEVHESTPVRTIVGSVDVTDKDLMDQANLRLSLIEQGTKSP 123
Query: 141 --PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
P+D F +D N G I T++ LD E+ Y + ++I+K
Sbjct: 124 KSPDD--FTIDKN-GRIMTHRELDREQIASY--KFYVIAK 158
>gi|66773334|ref|NP_001018872.1| protocadherin 1 gamma 2 precursor [Danio rerio]
gi|50881524|gb|AAT85342.1| protocadherin cluster 1 gamma 2 [Danio rerio]
Length = 938
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 74/161 (45%), Gaps = 21/161 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGPI---------- 76
G +++V ATD D G G V Y + A F++D T +G I
Sbjct: 256 GTEIIRVSATDADEGPNGEVTYEFSRISDKTAKLFSIDKTTGQILVKGEIDYESEKNYEL 315
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+D GL+S A V I +TD+ND P +PE + G VG ++ D D G
Sbjct: 316 GIQAKDASGLASIAKVIIDITDVNDNPPRIILKSLNNPIPENSEPGAEVGIINVQDKDSG 375
Query: 132 QNAVVYYSVPEDIPFVVD---ANTGDIRTNKALDYEKQQLY 169
+N + SV +++PF ++ N + T KALD EK+ Y
Sbjct: 376 ENRQIRCSVQQNVPFKLNPSVKNYFSLVTTKALDREKESDY 416
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Query: 79 EGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNA 134
+GGL S T ++I V D ND P F Y+ ++ E G + RV ATDADEG N
Sbjct: 214 DGGLPQRSGTTVIHITVLDANDNVPVFDQPVYKVTLAENTPSGTEIIRVSATDADEGPNG 273
Query: 135 VVYY-----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y S F +D TG I +DYE ++ Y
Sbjct: 274 EVTYEFSRISDKTAKLFSIDKTTGQILVKGEIDYESEKNY 313
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 26/167 (15%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-----NTDAASYFNL------DPATEHQ 73
+ E G + + DKDSG+ + + N N +YF+L D E
Sbjct: 356 ENSEPGAEVGIINVQDKDSGENRQIRCSVQQNVPFKLNPSVKNYFSLVTTKALDREKESD 415
Query: 74 GPIQ---DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG-LAVGRVHAT 126
I +GG LS++ T+++ V+D+ND P F+ Y + E +V V A
Sbjct: 416 YNITITATDGGSPPLSTSMTIHLFVSDVNDNPPLFEQQVYSAYINENNKADTSVCSVSAN 475
Query: 127 DADEGQNAVVYYS-VPEDIPFV-------VDANTGDIRTNKALDYEK 165
D D QN V YS VP ++ V ++ +TG I ++ DYE+
Sbjct: 476 DPDWRQNGTVLYSLVPSEVSGVPVSSFLSINGDTGVIHAVRSFDYEQ 522
Score = 43.1 bits (100), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 23/107 (21%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ------------DGLAVGRVHATDAD 129
LSS TV + +TD ND +P+ + VP+G+ G V +V A DAD
Sbjct: 540 LSSNVTVKVFITDENDNSPQIL-----YPVPDGKTLMTEMVPKATLSGSLVSKVIAVDAD 594
Query: 130 EGQNAVVYYSVPEDIP---FVVDANTGDIRTNKAL---DYEKQQLYL 170
GQNA + Y + + F + ++G+I+T + + D KQ L +
Sbjct: 595 SGQNAWLSYQILKSTDPGLFTIGLHSGEIKTQRDISESDNMKQNLVI 641
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 91 RVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRV-HATDADEGQNAVVYYSVPEDIPFVVD 149
++ DIND P F + F + E D R+ A D+D G+N++ YS+ ++ FV+
Sbjct: 121 QIQDINDNTPRFPNERINFEITESADKGQRFRLDEAHDSDIGKNSINDYSLEKNEHFVLT 180
Query: 150 ANTGD------IRTNKALDYEKQQ 167
+T D + K LD E+Q+
Sbjct: 181 VHTADEEKYAELVLEKELDREQQK 204
>gi|194668971|ref|XP_873159.3| PREDICTED: protocadherin alpha-7 [Bos taurus]
gi|296485260|tpg|DAA27375.1| TPA: protocadherin alpha 10-like [Bos taurus]
Length = 798
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 83/174 (47%), Gaps = 38/174 (21%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT--EHQGPIQ------------------ 77
A+D D + L+ YRL+ N YF+L+ + E + P++
Sbjct: 157 ASDADIRENALLTYRLIPNE-----YFSLEVPSNDEQEKPLELVLKKRLDREVASELLLV 211
Query: 78 ---DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE 130
+GG L+ T +NI V D ND P F + + E ++G + R++A+D DE
Sbjct: 212 LKATDGGKPELTGTVKINITVLDANDNAPVFDKAVHRIKLLENARNGTLIIRLNASDLDE 271
Query: 131 GQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N + YS D+ F +D+N+G+IR N +D+E+ +L+ ++ + K
Sbjct: 272 GSNGHILYSFATDVSSNTEASFRIDSNSGEIRVNGKIDFEETKLWKLQIEAVDK 325
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 11/103 (10%)
Query: 77 QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQN 133
+D G LS+TA+V++ V D+ND P F Y V E G + V A DAD +N
Sbjct: 428 KDRGSPSLSTTASVSVEVADVNDNAPVFAQPEYTVFVKENNPPGCHIFTVSARDADAQEN 487
Query: 134 AVVYYSVPED-------IPFV-VDANTGDIRTNKALDYEKQQL 168
A+V YS+ E +V V A +G + + LD+E+ +L
Sbjct: 488 ALVSYSLVERRVGERAMSSYVSVHAESGKVYALQPLDHEELEL 530
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 69/169 (40%), Gaps = 34/169 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---LDNNTDAASYFNLDPATEHQGPIQDEGGLS--- 83
G ++++ A+D D G G + Y + +NT+A+ F +D + G I+ G +
Sbjct: 258 GTLIIRLNASDLDEGSNGHILYSFATDVSSNTEAS--FRID---SNSGEIRVNGKIDFEE 312
Query: 84 -------------------STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRV 123
TV I V DIND PE S+PE G + +
Sbjct: 313 TKLWKLQIEAVDKGNPPMFGHCTVLIEVLDINDNAPELLVTSLLLSIPEDAPLGTVITLI 372
Query: 124 HATDADEGQNAVVYYSVPEDIPFVVDA---NTGDIRTNKALDYEKQQLY 169
TD D G NA V S+ +PF + + N + + +LD EK Y
Sbjct: 373 SITDRDVGSNAQVTCSLTPHVPFKLVSTFKNYYSLVLDSSLDREKVSEY 421
>gi|291230328|ref|XP_002735121.1| PREDICTED: GA26057-like [Saccoglossus kowalevskii]
Length = 3460
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 55/102 (53%), Gaps = 6/102 (5%)
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATD 127
A ++ P+Q S+TATV I VTD+ND NP Y F++ E + + V V A+D
Sbjct: 1283 AKDNGDPVQ-----SATATVIIHVTDVNDNNPRLLHESYHFTINENEIAYSYVDTVSASD 1337
Query: 128 ADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D+G N + YS+ D F +D TG I TN LD E +Y
Sbjct: 1338 RDQGTNGEIVYSIQPDDTFSIDEQTGMISTNMMLDREANFMY 1379
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 78/170 (45%), Gaps = 27/170 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN--------LDPATEHQGPIQDEG 80
LG +M + A D D G G V Y ++D N + +DP Q +D
Sbjct: 1757 LGYPIMHINALDPDFGDNGRVVYNIVDGNEEGKFTIEHSTGILSLVDPLDREQ---RDAY 1813
Query: 81 GLSSTAT------------VNIRVTDINDKNPEFQSLPYEFSVPEGQDG-LAVGRVHATD 127
GL+ +A+ + I + D+ND P F S + V E QD + +G V+ATD
Sbjct: 1814 GLNISASDHGVLPRVAFQYLIIYLEDVNDNAPVFTSDMFVMDVQENQDAFIYLGSVNATD 1873
Query: 128 ADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERVF 174
AD N V YS+P I F ++A++G I TN ALD E Y V+
Sbjct: 1874 ADIDVNGQVLYSIPNGIANDMFWINADSGAIYTNGALDRETLGSYAVTVY 1923
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 76/170 (44%), Gaps = 38/170 (22%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP--------------------- 68
GV+++ V ATD+DSG + Y + + + F +DP
Sbjct: 2495 GVSILTVNATDRDSGLNARIIYSI---DVNPGIGFTIDPHTGILFTNDTIRVQSNPHVVH 2551
Query: 69 ----ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRV 123
AT+H P LSS +V I VTD+ND +P F YE SV E G V RV
Sbjct: 2552 LGISATDHGEP-----ALSSLVSVRIEVTDVNDNSPMFIPSVYEASVSEAVTKGHNVTRV 2606
Query: 124 HATDAD-EGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
HATDAD +N V YS+ D F + A++G I LD E LY
Sbjct: 2607 HATDADYSRENNQVDYSIISGNIDNMFEISASSGQIAVLGDLDRETLALY 2656
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 84/181 (46%), Gaps = 23/181 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKD-SGKFGLVEYRLLDNNTD-----------AASYFNL 66
Y A + G + +V ATD D S + V+Y ++ N D A +L
Sbjct: 2589 YEASVSEAVTKGHNVTRVHATDADYSRENNQVDYSIISGNIDNMFEISASSGQIAVLGDL 2648
Query: 67 DPATEH------QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
D T Q + E S+ ATVNI V D ND PEF YE +V EG G
Sbjct: 2649 DRETLALYTLIVQAADRGEPQQSNVATVNIEVEDFNDHTPEFNEEEYEGTVSEGVPVGTT 2708
Query: 120 VGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
+ VHATD D G NA++ Y + E F +D +TG I + LD++ QQ + R+ +I
Sbjct: 2709 ILTVHATDRDIGLNAMIRYDISSGNELDLFKIDQSTGVITSKSRLDHDTQQ-SVHRLSII 2767
Query: 177 S 177
+
Sbjct: 2768 A 2768
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 74/162 (45%), Gaps = 22/162 (13%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPIQ---- 77
L V ATD D+G + Y + N + ++ LD T+H ++
Sbjct: 1970 LHVVVATDADTGTNAEIRYSITGGNEGNRFVIDPITGEFSTQITLDRETKHHYELEITAE 2029
Query: 78 --DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE--GQDGLAVGRVHATDADEGQN 133
L+ T + + V D+ND P F++LPY S+PE +G V V ATDAD G N
Sbjct: 2030 DMATNPLTGTMNITVDVVDLNDNAPLFENLPYTVSIPEDFAVNG-TVLTVVATDADLGTN 2088
Query: 134 AVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
A V Y++ + F +D TGD+ + + D E Q Y V
Sbjct: 2089 AGVNYTLENLMERVFRIDCKTGDVTSVRRFDRESQAEYFFHV 2130
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 35 QVKATDKDSGKFGLVEYRLLDN-------------NTDAASYFNLDPATEHQGPIQDE-- 79
QV A D+D+G G V Y ++D N Y + + A H I
Sbjct: 1549 QVIAADRDAGNNGAVRYYIIDGDIYGTFEINHTTGNIFTVKYVDYELAASHVLTILASDM 1608
Query: 80 ---GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRV----HATDADEGQ 132
LS+T TV+I +TD+ND PEF + P F + E +A+G V A DAD G
Sbjct: 1609 NILHPLSTTTTVHIYITDLNDNAPEFANDPIIFPLRE---NVAIGHVAYTFSAVDADSGW 1665
Query: 133 NAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
N + Y++ + I F + TG+++T DY ++ Y E +I
Sbjct: 1666 NGKIRYNISGHSGKHIMFEIHPETGELKTT---DYINREEYSEYTLVI 1710
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 22/174 (12%)
Query: 14 SDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQ 73
S +L Y ++ +G + A D D G++G++ Y L D + +YF +D +
Sbjct: 2797 SPALMYVKTLAEEEPIGTYVFTAHAVDNDGGRYGVLTYTLED--SPGRNYFEIDAESGEV 2854
Query: 74 GPIQ------------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EG 114
++ D GG T I +T +++ PEF S Y F VP
Sbjct: 2855 TSLKKFDYETDQWEYLLSIKASDIGGKYVTVQARIEITGVDEFAPEFSSSDYSFLVPANA 2914
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQ 167
+ G VG+V A D D G + +V Y +++ F ++ G I +L+ + Q+
Sbjct: 2915 EPGYTVGQVSAIDKDAGLDGLVLYYFDKELDMFTINETHGYITVKDSLEVKTQR 2968
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 43/171 (25%)
Query: 37 KATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD------------------ 78
+A D D G F Y ++ N D+A F LD G ++D
Sbjct: 356 EARDADEGIFATQTYEIVSGNVDSA--FRLD--FREGGGVRDRVLYLDLVVNNYLDRETI 411
Query: 79 ----------EGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVH 124
+GG+ + + +N+ +TD ND P F Y + E G ++ +VH
Sbjct: 412 PRYELVIHAIDGGVPAKTGSTLLNVTITDANDNQPVFNQSRYSARIAETASVGRSILQVH 471
Query: 125 ATDADEGQNAVVYYSV------PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
ATD DEG N V Y + PE+ F V++ TG + NK L+YE + ++
Sbjct: 472 ATDIDEGSNGAVSYDINRRQSDPEEY-FRVNSQTGVLYLNKELNYEDKSVH 521
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 72/156 (46%), Gaps = 33/156 (21%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ-------------------- 77
ATD+DSG G VEYRL+D+N + ++ L + G IQ
Sbjct: 1121 ATDRDSGDNGKVEYRLVDSN-NMNNFDGLFSINKLTGQIQIHRTVEYSEMSEYELIIEAY 1179
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR----VHATDADEG 131
D+G LSS T+ + + D+N+ P+F YE V E L VG V ATD D G
Sbjct: 1180 DKGHPSLSSVMTLKVYIQDMNNNGPQFYPTSYEVDVAE---SLVVGERIVTVSATDGDLG 1236
Query: 132 QNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYE 164
NA + Y++ F + +TG + T K LD E
Sbjct: 1237 NNARITYTLRASQYAGNFGIFPDTGVLYTKKMLDRE 1272
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 63/159 (39%), Gaps = 20/159 (12%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSS------ 84
+ L V ATD D G V Y + + + + N D + D L S
Sbjct: 1864 IYLGSVNATDADIDVNGQVLYSIPNGIANDMFWINADSGAIYTNGALDRETLGSYAVTVY 1923
Query: 85 -----------TATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQN 133
T V + V D+ND P F Y SVPE + V ATDAD G N
Sbjct: 1924 ANDQAFPSLFDTTLVLVNVLDMNDHAPVFAMSTYSISVPENGQTTRLHVVVATDADTGTN 1983
Query: 134 AVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
A + YS+ E FV+D TG+ T LD E + Y
Sbjct: 1984 AEIRYSITGGNEGNRFVIDPITGEFSTQITLDRETKHHY 2022
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 78/182 (42%), Gaps = 42/182 (23%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL------------------------- 53
Y A R+ ++QV A D DSG G+V Y L
Sbjct: 1419 YVANVREDEPPNSAVIQVTAKDPDSGSNGVVSYDLVAGELGYLSGIFNNQVMFTIDETNG 1478
Query: 54 -------LDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLP 106
LD + ++ + + A +H P ++ + A V + V D ND +P+F +
Sbjct: 1479 MIRTRAVLDRESKSSYHLTV-MARDHGNPPKE-----AVAFVRVEVKDENDNSPKFMNST 1532
Query: 107 YEFSVPEGQ-DGLAVGRVHATDADEGQN-AVVYYSVPEDI--PFVVDANTGDIRTNKALD 162
Y F+V E +G+V A D D G N AV YY + DI F ++ TG+I T K +D
Sbjct: 1533 YAFTVQENTPPSTNIGQVIAADRDAGNNGAVRYYIIDGDIYGTFEINHTTGNIFTVKYVD 1592
Query: 163 YE 164
YE
Sbjct: 1593 YE 1594
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 85/189 (44%), Gaps = 32/189 (16%)
Query: 11 EMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-NTDAASYFNLDPA 69
E + D+ FY A + ++QV ATD D+ +FG + Y + + F++ P
Sbjct: 769 EPSFDNSFYNASVFEDVSTDYCVLQVAATDPDADEFGRITYSMGHVFGISPPAEFSIRPE 828
Query: 70 T----------EHQG------PIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
T +G P+Q D GGL S VNI + D+ND P F P+ ++V
Sbjct: 829 TGWICATMSLDRDRGTTSFLFPVQATDGGGLHSVTMVNINILDVNDNKPIF--YPHIYAV 886
Query: 112 PEGQD---GLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGD-----IRTNKA 160
+D G V V ATD D G ++ Y + E+ F +++ +G IR +
Sbjct: 887 DLSEDSAVGTEVISVAATDRDAGAYGLITYQITSGNENNIFTINSRSGKLFSRMIRLQLS 946
Query: 161 LDYEKQQLY 169
L+ + Q L+
Sbjct: 947 LNRQLQSLH 955
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 41/172 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL-----------------------LDNNTDAA---- 61
+G T++ V ATD+D G ++ Y + LD++T +
Sbjct: 2705 VGTTILTVHATDRDIGLNAMIRYDISSGNELDLFKIDQSTGVITSKSRLDHDTQQSVHRL 2764
Query: 62 SYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAV 120
S +D +HQ L + +V I VTD ND P +L Y ++ E + G V
Sbjct: 2765 SIIAMDSGIDHQ--------LQAVTSVIIHVTDENDHAPFSPALMYVKTLAEEEPIGTYV 2816
Query: 121 GRVHATDADEGQNAVVYYSVPEDIP----FVVDANTGDIRTNKALDYEKQQL 168
HA D D G+ V+ Y++ ED P F +DA +G++ + K DYE Q
Sbjct: 2817 FTAHAVDNDGGRYGVLTYTL-EDSPGRNYFEIDAESGEVTSLKKFDYETDQW 2867
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 74/171 (43%), Gaps = 29/171 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD--------AASYF----------NLDPAT 70
+G ++ V ATD+D+G +GL+ Y++ N + + F N +
Sbjct: 894 VGTEVISVAATDRDAGAYGLITYQITSGNENNIFTINSRSGKLFSRMIRLQLSLNRQLQS 953
Query: 71 EHQGPIQ--DEGGLSST--ATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHA 125
HQ I D GGL S A V+I V D P F Y +SV E ++ VHA
Sbjct: 954 LHQLTISATDGGGLQSLIDADVSISVISSEDSPPIFDHPIYSYSVSEDSPRFQSISTVHA 1013
Query: 126 TDADEGQ----NAVVY--YSVPEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
AD G+ +++ Y +S D F + TG + N ALDYE L
Sbjct: 1014 AHADPGKTNNRDSITYTIHSGDPDGYFSLHPTTGVLSINSALDYESHVYVL 1064
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV----PE 142
+ I + DIND P F Y V E + V +V ATDAD G NAV+ YS+ P+
Sbjct: 2347 LKIILDDINDNPPIFIHERYSAQVWENELRNTYVTQVIATDADIGDNAVITYSITKSEPD 2406
Query: 143 DIPFVVDANTGDIRTNKALDYEKQQLY 169
+ F++D+ +G I T LD+E + Y
Sbjct: 2407 EQDFIIDSGSGVILTRFILDWEIHKTY 2433
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 71/176 (40%), Gaps = 33/176 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY------------FNL 66
Y A + + QV ATD D G ++ Y + + D + F L
Sbjct: 2366 YSAQVWENELRNTYVTQVIATDADIGDNAVITYSITKSEPDEQDFIIDSGSGVILTRFIL 2425
Query: 67 DPATEHQGPI-------QDEGGLSSTATVNIRVTDINDKNPEF-----------QSLPYE 108
D + L+S+ V ++V D ND +P F + +
Sbjct: 2426 DWEIHKTYKLTIKAVDGSGSNALTSSCVVRVKVIDTNDNSPTFAEHNGVKIKEGKYYIFN 2485
Query: 109 FSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKAL 161
+VPE G+++ V+ATD D G NA + YS+ + I F +D +TG + TN +
Sbjct: 2486 VAVPELTPTGVSILTVNATDRDSGLNARIIYSIDVNPGIGFTIDPHTGILFTNDTI 2541
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 58/132 (43%), Gaps = 28/132 (21%)
Query: 32 TLMQVKATDKDSGKFGLVEY----------------------RLLDNNTDAASYFNLDPA 69
T++ V ATD D G V Y R D + A +F+++
Sbjct: 2074 TVLTVVATDADLGTNAGVNYTLENLMERVFRIDCKTGDVTSVRRFDRESQAEYFFHVNAT 2133
Query: 70 TEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
E LSS A ++I +TDIND PEF P+ ++ +V ++ ++D+
Sbjct: 2134 DESVS-----NPLSSQAPIHIIITDINDNAPEFTQEPFTANISNDLPVDSSVLQISSSDS 2188
Query: 129 DEGQNAVVYYSV 140
DEG NA V YS+
Sbjct: 2189 DEGVNAEVTYSL 2200
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 61/142 (42%), Gaps = 32/142 (22%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE------- 71
Y A + +G +++QV ATD D G G V Y + +D YF ++ T
Sbjct: 453 YSARIAETASVGRSILQVHATDIDEGSNGAVSYDINRRQSDPEEYFRVNSQTGVLYLNKE 512
Query: 72 --------HQGPIQ--DEGGL--SSTATVNIRVTDINDKNPEFQ-------SLPY--EFS 110
H+ I+ D G STA V + VT++N+ P + LPY E +
Sbjct: 513 LNYEDKSVHELIIEARDNGTYPERSTAFVTVHVTNVNENPPNVEILFLGNGGLPYVSENA 572
Query: 111 VPEGQDGLAVGRVHATDADEGQ 132
+P G + R+ D DEG+
Sbjct: 573 IP----GDYIARITVIDPDEGE 590
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 69/170 (40%), Gaps = 24/170 (14%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--------------TDAASYFNLDPA 69
R+ +G A D DSG G + Y + ++ Y N +
Sbjct: 1644 RENVAIGHVAYTFSAVDADSGWNGKIRYNISGHSGKHIMFEIHPETGELKTTDYINREEY 1703
Query: 70 TEHQG-------PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR 122
+E+ P++ + L T T I + D ND +P F S Y + + + G +
Sbjct: 1704 SEYTLVIEAMDLPLEPQQPLIGTTTARIIIEDENDNSPLFVSRSYTYVMEDEPLGYPIMH 1763
Query: 123 VHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
++A D D G N V Y++ E+ F ++ +TG + LD E++ Y
Sbjct: 1764 INALDPDFGDNGRVVYNIVDGNEEGKFTIEHSTGILSLVDPLDREQRDAY 1813
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 42/99 (42%), Gaps = 14/99 (14%)
Query: 85 TATVNIRVTDINDKNPEF-QSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV-- 140
T+ V I V D ND PEF Y +V E + AV +V A D D G N VV Y +
Sbjct: 1396 TSVVYINVLDENDNPPEFNHKGDYVANVREDEPPNSAVIQVTAKDPDSGSNGVVSYDLVA 1455
Query: 141 ----------PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ F +D G IRT LD E + Y
Sbjct: 1456 GELGYLSGIFNNQVMFTIDETNGMIRTRAVLDRESKSSY 1494
>gi|380024251|ref|XP_003695917.1| PREDICTED: cadherin-89D-like [Apis florea]
Length = 1936
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 63/134 (47%), Gaps = 22/134 (16%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLL------DNNTDAASYFNLDP-----------ATE 71
+G ++++ A DKD G+ + Y L D+ T+ YF+LDP A E
Sbjct: 973 IGAPIIRLLAEDKDEGRNAAITYSLGNETVSGDDTTNQRRYFHLDPRSAEISVARGLAAE 1032
Query: 72 HQGPI----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
+ +D GGL T+ I V D+ND +P F Y F V EG G +G V A
Sbjct: 1033 SNVRLLVLAKDPGGLFDNITIRIHVADVNDHSPAFDKSWYTFDVAEGSYAGYTLGTVRAV 1092
Query: 127 DADEGQNAVVYYSV 140
DAD G NA V Y +
Sbjct: 1093 DADHGGNANVTYEL 1106
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 29/181 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD--NNTDAASYFNLDPATE---- 71
Y +AR ++G L QV A D D G G+V YRL N+T F +D T
Sbjct: 492 LYELVARSDSKVGTVLGQVHAVDDDLGPNGMVRYRLQKPGNSTARTPPFTVDEVTGTIAV 551
Query: 72 HQGPIQD-----------------EGGLS-STATVNIRVTDINDK-NPEFQSLPYEFSVP 112
+ PI + E LS + TV++ +D + P+F PYEF V
Sbjct: 552 FESPILEGRHAIFVEAADQPANPSERRLSLAVVTVDVFRSDGPESLEPDFVGAPYEFWVG 611
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQL 168
G +VG++ DA + + ++Y +S E +PF V+ +G I + ++ + +
Sbjct: 612 ANVPVGTSVGQIRLNDAVKTNDLLIYDLLHSYEEGVPFAVEERSGTITVVEEIERFDRSI 671
Query: 169 Y 169
Y
Sbjct: 672 Y 672
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYS-V 140
S A V + V D+ND PEF+ Y S+ E +G +V +V A D D+G+N Y V
Sbjct: 357 SGAARVEVEVLDLNDNLPEFEVDLYNISIVENLPNGFSVLQVIARDRDQGENGQFDYELV 416
Query: 141 PEDIPFVVDANTG--DIRTNKALDYEKQQLYLERVFLISK 178
F VDA +G +R LD E++ RV + +
Sbjct: 417 DPSGAFSVDARSGWLTVRDQSVLDRERRDRLKMRVVAVER 456
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 86 ATVNIRVTDINDKNPEFQS--LPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV-- 140
A V +RV D+ND P F+S P ++P G V +V A D DEG NA + Y +
Sbjct: 1418 ARVVVRVKDVNDNAPRFKSKGRPILAAIPTTAHYGYEVVKVEAEDPDEGANAEIRYQILG 1477
Query: 141 PEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
ED P F +D +G +R+ + + +++
Sbjct: 1478 REDAPRFAIDPLSGQVRSVASFGRDAGRVF 1507
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 36/160 (22%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNN----TDAASYF-----------------NLDP 68
G +++QV A D+D G+ G +Y L+D + DA S + +
Sbjct: 392 GFSVLQVIARDRDQGENGQFDYELVDPSGAFSVDARSGWLTVRDQSVLDRERRDRLKMRV 451
Query: 69 ATEHQGP--IQDEGGLSSTATVNIRVTDINDKNPEFQSLP---YEF-SVPEGQDGLAVGR 122
+ P + G SS+ V++ + D ND NP F +P YE + + + G +G+
Sbjct: 452 VAVERRPSVVPRNGSSSSSVDVDVTLLDANDNNPIF--VPGNLYELVARSDSKVGTVLGQ 509
Query: 123 VHATDADEGQNAVVYY-------SVPEDIPFVVDANTGDI 155
VHA D D G N +V Y S PF VD TG I
Sbjct: 510 VHAVDDDLGPNGMVRYRLQKPGNSTARTPPFTVDEVTGTI 549
>gi|355693141|gb|EHH27744.1| hypothetical protein EGK_18015, partial [Macaca mulatta]
Length = 726
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 84/185 (45%), Gaps = 31/185 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV A D D +G +L+ D +F++DP T
Sbjct: 155 YHATVPEMSNVGTSVIQVTAHDADDPSYG-NSAKLVYTVLDGLPFFSVDPQTGVVRTAIP 213
Query: 71 --------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E IQ + GGLS + TV + ++D+ND P+F Y+FSV E
Sbjct: 214 NMDRETQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAG 273
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV-----PEDIPFVVDANTGD--IRTNKALDYEKQQL 168
G VGR+ A D D G NA++ YS+ E D+ D + K LD+E ++
Sbjct: 274 PGTLVGRLRAQDPDLGDNALMAYSILDGEGSEAFSISTDSQGRDGLLTVRKPLDFESRRS 333
Query: 169 YLERV 173
Y RV
Sbjct: 334 YAFRV 338
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 63/127 (49%), Gaps = 22/127 (17%)
Query: 50 EYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF 109
+Y LL D AS L+P +E I+V DIND P F PY
Sbjct: 114 QYVLLAQAVDRASNRPLEPPSEFI----------------IKVQDINDNPPIFPLGPYHA 157
Query: 110 SVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIPFV-VDANTGDIRTN-KALDY 163
+VPE + G +V +V A DAD+ G +A + Y+V + +PF VD TG +RT +D
Sbjct: 158 TVPEMSNVGTSVIQVTAHDADDPSYGNSAKLVYTVLDGLPFFSVDPQTGVVRTAIPNMDR 217
Query: 164 EKQQLYL 170
E Q+ +L
Sbjct: 218 ETQEEFL 224
Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 12/122 (9%)
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVH 124
+DPA +GP +D A+V + V D + P F Y +VPE + G VG++
Sbjct: 345 IDPAYLRRGPFKD------VASVRVVVQDAPEP-PAFTQAAYHLTVPENKAPGTLVGQIS 397
Query: 125 ATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERVFLISKFAT 181
A D D + + Y +P P F + G I T LD E +++ L ++
Sbjct: 398 AADLDSPASPIRYSILPHSDPERYFSIQPEEGTIHTAAPLDREA-RVWHNLTVLATELGW 456
Query: 182 SY 183
S+
Sbjct: 457 SW 458
>gi|345479135|ref|XP_001602595.2| PREDICTED: cadherin-related tumor suppressor-like [Nasonia
vitripennis]
Length = 4967
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 88/186 (47%), Gaps = 26/186 (13%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------AT 70
+ + E+G ++++ ++D+D G V Y N ++ F +DP A
Sbjct: 2790 LFSVNVTENSEIGAFVIRITSSDQDIGANANVSYSFTGNPSNK---FAIDPLSGNVTVAG 2846
Query: 71 EHQGPIQDE---------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-V 120
+QDE G + + I + D ND PEF+ Y F PE Q +A V
Sbjct: 2847 HLDREVQDEYLLKVTVGDGAWGAETPLTITIQDQNDNPPEFEEETYHFHFPELQGRMAHV 2906
Query: 121 GRVHATDAD-EGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYE--KQQLYLERVFL 175
G+V ATD D +G N+V+ YS+ P D+ F VD +GDI + + L Y+ K+ E V+
Sbjct: 2907 GQVVATDRDKQGPNSVISYSLLQPSDL-FTVDPASGDIFSKRTLRYKHTKRPTSPENVYS 2965
Query: 176 ISKFAT 181
+ AT
Sbjct: 2966 LYVVAT 2971
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 74/162 (45%), Gaps = 21/162 (12%)
Query: 33 LMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLDPATEHQGPI--------------- 76
+M VKA DKD G+ G VEY L + + S +D GP+
Sbjct: 2067 VMAVKAVDKDEGRNGYVEYALEFGHGSLPFSLGAVDGVLRVAGPLDREQRANYTLRLIAK 2126
Query: 77 -QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNA 134
+ E S+ TV + V D ND +P F Y SV E G +V +V A D DEG N
Sbjct: 2127 DRGEPARSTLQTVQLLVLDENDNSPIFDPRQYSASVAENASIGASVLQVSALDRDEGANG 2186
Query: 135 VVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V YS+ ++ F + + G IR K L++E++ Y +V
Sbjct: 2187 RVRYSIAAGDDNRDFTISEDAGVIRVAKNLNFERKARYRLQV 2228
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
L V++ ++D+ND P+F+ LPY V E G + RV+ +DADEG N V+YS+
Sbjct: 1162 LKDRVKVSVYISDVNDNTPQFKRLPYRVQVSEAALVGTQLLRVYTSDADEGLNGDVFYSL 1221
Query: 141 P---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D TG I + LD E + Y
Sbjct: 1222 ENEQHDGQFTIDEATGQISLARELDRETRDNY 1253
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVP 141
SSTATV + + D+ND P F Y F+VP+ G +G+V ATDAD +NA V YS+
Sbjct: 634 SSTATVLLTLEDVNDNPPVFYPTNYFFTVPQDATPGTLIGKVFATDADAKENAQVRYSLE 693
Query: 142 E--DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F VD TGD+ AL + L+
Sbjct: 694 SGGDGFFSVDERTGDVFLQGALRQAHKILF 723
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 79/161 (49%), Gaps = 25/161 (15%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQGP 75
VTL+ KA D DS G ++Y ++ ++ S F LD +T +
Sbjct: 1753 VTLL--KAHDPDS--IGTLKYSIVTPPKNSPSPFKLDSSTGQLRLAEALDREAKESYVLR 1808
Query: 76 IQDEGGLSST-ATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADE-GQ 132
++ + GL T T++I VTD ND P FQ+ Y F V E G VG+V A DAD G
Sbjct: 1809 VRADDGLQHTDVTLSILVTDTNDNAPSFQATAYSFDVLENVPRGSRVGQVVANDADAPGP 1868
Query: 133 NAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYL 170
N+ + Y++ D F ++ +TG +LDYE+ Q Y+
Sbjct: 1869 NSQISYALISDWANDVFSLNPSTGVFTLTASLDYEQVQHYI 1909
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Query: 61 ASYFNLDPATEHQGPIQ----DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ- 115
AS F+ + A ++ ++ E L S + + VTD ND P S Y SVPE +
Sbjct: 2638 ASGFDYETAPHYEAWVEVRDSGEPSLRSVIQLLVNVTDANDNAPVMDSAVYNASVPEEEY 2697
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
L V ++ A DAD G N V Y + D FV+D +G+I TN LD E+ Y
Sbjct: 2698 PPLFVTKISAKDADSGSNGEVTYHLMNDFDETFVIDEESGEISTNAKLDREEISSY 2753
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 77/160 (48%), Gaps = 20/160 (12%)
Query: 30 GVTLMQVKATDKDSGKFG-LVEYRLLDNNTD-------AASYFNLDP-----ATEHQGPI 76
G +MQVKA D D+ + V Y L + +TD F L P +E+ +
Sbjct: 2280 GGFVMQVKAYDADTPPYNDQVRYFLKEGDTDLFRINASTGDIFLLRPLDRELVSEYVLTL 2339
Query: 77 --QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEG 131
D G L+ + V + V D+ND +PEF Y SV E G V A+D DEG
Sbjct: 2340 VAMDTGSPPLTGSGIVRVVVLDVNDHSPEFNRQEYRASVTENLPAGAWVANPLASDKDEG 2399
Query: 132 QNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
NA + YS+ D F V+++TG+I T + LD E+ +Y
Sbjct: 2400 LNARIRYSLLGDKAERFHVNSSTGEIVTLERLDREQTAVY 2439
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 73/175 (41%), Gaps = 30/175 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEY----------------------RLLDNNTDAASYFNL 66
+G ++ A+D DSG G V Y RLLD + L
Sbjct: 1957 IGSVVLSASASDLDSGDNGHVVYSIISGDEAEDFGIANNGTLYTRRLLDRENKSVYNLVL 2016
Query: 67 DPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHAT 126
+ A + P L+ST V I + D+ND++PEF S + V V A
Sbjct: 2017 EAADSPRPPTTP---LASTIQVTISLLDVNDQSPEFVSSNQTSILENAAINSVVMAVKAV 2073
Query: 127 DADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
D DEG+N V Y++ +PF + A G +R LD E++ Y R LI+K
Sbjct: 2074 DKDEGRNGYVEYALEFGHGSLPFSLGAVDGVLRVAGPLDREQRANYTLR--LIAK 2126
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 81/185 (43%), Gaps = 34/185 (18%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG 74
DS Y A ++ + + ++ A D DSG G V Y L++ D F +D E G
Sbjct: 2684 DSAVYNASVPEEEYPPLFVTKISAKDADSGSNGEVTYHLMN---DFDETFVID---EESG 2737
Query: 75 PI--------------------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
I +D G L+ TATV + V D ND P F L + +V
Sbjct: 2738 EISTNAKLDREEISSYELIVEARDRGTPQLTGTATVLVTVLDKNDNPPRFTRL-FSVNVT 2796
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQL 168
E + G V R+ ++D D G NA V YS P + F +D +G++ LD E Q
Sbjct: 2797 ENSEIGAFVIRITSSDQDIGANANVSYSFTGNPSN-KFAIDPLSGNVTVAGHLDREVQDE 2855
Query: 169 YLERV 173
YL +V
Sbjct: 2856 YLLKV 2860
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 75/177 (42%), Gaps = 26/177 (14%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE----- 71
L Y + +G L++V +D D G G V Y L + D F +D AT
Sbjct: 1185 LPYRVQVSEAALVGTQLLRVYTSDADEGLNGDVFYSLENEQHDGQ--FTIDEATGQISLA 1242
Query: 72 -----------HQGPIQDEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
H + + G LSS+ATV+I V D ND P F SV E
Sbjct: 1243 RELDRETRDNYHLTVVAHDAGIESRLSSSATVHIEVLDENDNTPRFVDNKPRISVLETAP 1302
Query: 117 -GLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ + R ATD+D G N+ + +++ F VD TG + K LDYE ++Y
Sbjct: 1303 VNVELLRFRATDSDLGANSELTFAISAGNRRDAFHVDPATGALYLRKPLDYEDIEVY 1359
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYY--- 138
S+TA + I V D+ND P FQ Y + E G V + ATDAD G NA +YY
Sbjct: 421 SATAYLVIHVNDVNDHEPVFQQSEYSAVLSELSPIGSFVASISATDADSGLNARIYYDFE 480
Query: 139 SVPEDIPFVVDANTGDIRTNKALDYEKQ 166
S E F +D +TG + T LD E Q
Sbjct: 481 SGNEQNWFAIDQDTGLVTTVATLDREIQ 508
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 74/175 (42%), Gaps = 36/175 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVE-YRLLDNNTDA---------------------------- 60
G L+ ATDKD+ + G+ + Y +++ NTDA
Sbjct: 114 GTKLLLDAATDKDTPENGVTDDYFIVNGNTDAKFRLSVTGNPIGETSYLHLETTGKLDRE 173
Query: 61 -ASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
Y++L+ +G G L VN+ V D+ND P FQ Y ++ E G
Sbjct: 174 QVEYYHLNVCARDKGRPPKLGCL----MVNVTVLDVNDNPPIFQQSDYVVTLNESAAVGT 229
Query: 119 AVGRVHATDADEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLER 172
V V A D D NA + Y +P+ + F +D +TG I T + LD +Q + R
Sbjct: 230 HVLTVRAVDKDTDDNAQLTYYLPDNERQFTIDPDTGAIVTAEVLDCPQQSCTVAR 284
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 80/182 (43%), Gaps = 33/182 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL--DNNTD-----------AASYFN 65
Y A + +G +++QV A D+D G G V Y + D+N D A N
Sbjct: 2158 YSASVAENASIGASVLQVSALDRDEGANGRVRYSIAAGDDNRDFTISEDAGVIRVAKNLN 2217
Query: 66 LDPATEHQGPIQDE------GG--LSSTATVNIRVTDINDKNPEFQSLPY-----EFSVP 112
+ ++ +Q E GG L A V I + DIND P F PY E +P
Sbjct: 2218 FERKARYRLQVQAEDCAPELGGEALVDAAEVVINLLDINDNAPVFLDSPYLAHVMENMLP 2277
Query: 113 EGQDGLAVGRVHATDADEGQ-NAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQL 168
G G V +V A DAD N V Y + E D+ F ++A+TGDI + LD E
Sbjct: 2278 PG--GGFVMQVKAYDADTPPYNDQVRYFLKEGDTDL-FRINASTGDIFLLRPLDRELVSE 2334
Query: 169 YL 170
Y+
Sbjct: 2335 YV 2336
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 81/186 (43%), Gaps = 30/186 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A+ + +G + + ATD DSG + Y N ++F +D T
Sbjct: 445 YSAVLSELSPIGSFVASISATDADSGLNARIYYDFESGNEQ--NWFAIDQDTGLVTTVAT 502
Query: 71 ---EHQGPIQ------DEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQDGLA 119
E QG ++ D G + ++RVT D ND+ P+F E ++ E +
Sbjct: 503 LDREIQGSVELKVLARDGGPNPKYVSTHLRVTILDENDEAPKFSQNIVEVTLSENTPANS 562
Query: 120 -VGRVHATDADEGQNAVVYYS----VPEDIP--FVVDANTGDIRTNKALDYEKQQLYLER 172
V + A D D+G N V YS V D P F +DA TG + T LD E + Y R
Sbjct: 563 LVATLSAVDNDQGTNGSVAYSLHPNVLRDYPKTFALDALTGQLMTKITLDRESVEEY--R 620
Query: 173 VFLISK 178
V +I++
Sbjct: 621 VLVIAR 626
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 25/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF-----------NLDPATEHQGPI 76
E+G ++ V+ATD+D+G G V Y + ++ D LD T+++ +
Sbjct: 3296 EVGTSVGLVQATDQDAGVDGKVFYLFVGSSNDRGFSIGPETGIISVSRRLDRETQNRAIL 3355
Query: 77 ----QDEGGL----SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
++ GG+ + A V I + D ND PEF YE SV EG+ G + V A D
Sbjct: 3356 TVMAKNTGGIRGNDTDEAQVIISIQDGNDP-PEFLQTLYEASVSEGESVGSRIVTVRAID 3414
Query: 128 AD-EGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D QN YS+ F VD +GDI T K LD E Y
Sbjct: 3415 KDVRPQNNQFSYSIIGGNVGQAFKVDPQSGDIETAKFLDRESVPSY 3460
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS 139
LSST TV V D+ND P F++ P + E G V A+D D G N V YS
Sbjct: 1921 ALSSTVTVYCNVVDLNDNTPIFEAGPRSAELMENATIGSVVLSASASDLDSGDNGHVVYS 1980
Query: 140 V-----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ ED AN G + T + LD E + +Y
Sbjct: 1981 IISGDEAEDFGI---ANNGTLYTRRLLDRENKSVY 2012
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG-LAVGRVHATDADEGQNAVVYYSVP 141
SST V + + D ND P+F + + F + E + VG++ A+D D G+NA + +S+P
Sbjct: 1054 SSTVPVVVHIIDENDNAPQFSNSSFTFHLRENEPADTFVGKLLASDRDVGRNADLTFSLP 1113
Query: 142 EDIP-FVVDANTGDIRTNKALDYEKQQLYL 170
FVVD G I++ D ++QL L
Sbjct: 1114 SSQQDFVVDPRNGFIKSMHPFD--REQLVL 1141
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 10/102 (9%)
Query: 80 GGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVV 136
GG ST++ +RV+ D ND P + S P++F + E V + A D D +
Sbjct: 1710 GGKPSTSSTKVRVSVLDKNDVAPSWGSGPWKFEISEEAPPNTIVTLLKAHDPD--SIGTL 1767
Query: 137 YYSV---PEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
YS+ P++ P F +D++TG +R +ALD E ++ Y+ RV
Sbjct: 1768 KYSIVTPPKNSPSPFKLDSSTGQLRLAEALDREAKESYVLRV 1809
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 71/166 (42%), Gaps = 34/166 (20%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE----------------H 72
+ V L++ +ATD D G + + + N A F++DPAT H
Sbjct: 1303 VNVELLRFRATDSDLGANSELTFAISAGNRRDA--FHVDPATGALYLRKPLDYEDIEVYH 1360
Query: 73 QGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR----VHA 125
+ G LSS T+ + V D ND P F P V + +G+ V R V A
Sbjct: 1361 LNVTCSDAGHPRLSSVITLRVDVIDTNDNPPVF---PNTAIVRQIVEGIPVHRPVVTVTA 1417
Query: 126 TDADEGQNAVVYYSV----PEDIP--FVVDANTGDIRTNKALDYEK 165
D D G N V+ YS+ PED F ++ TG I T +D E+
Sbjct: 1418 VDPDSGDNGVLSYSIASQDPEDQKRRFGINPTTGVIHTLLPIDREE 1463
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 68/172 (39%), Gaps = 22/172 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPATE 71
Y A + G + A+DKD G + Y LL + N+ L+
Sbjct: 2374 YRASVTENLPAGAWVANPLASDKDEGLNARIRYSLLGDKAERFHVNSSTGEIVTLERLDR 2433
Query: 72 HQGPI-------QDEGGLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPE--GQDGLA 119
Q + QD A + I VTD+ND P F S Y VP+ G+
Sbjct: 2434 EQTAVYHLTLVAQDSSPTEPKAAAVNLTITVTDLNDNAPRFASPRYTAYVPDSTGKGDFV 2493
Query: 120 VGRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G ATD D+G N+ + Y + + F VD ++G IR + L + +Y
Sbjct: 2494 FG-AKATDDDDGDNSRIVYRLHGKDSHRFAVDPHSGVIRALEKLASGGRSMY 2544
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 68/159 (42%), Gaps = 36/159 (22%)
Query: 35 QVKATDKDS-GKFGLVEYRLLDNNTDAASYFNLDPAT-----------EH-QGPIQDEG- 80
QV ATD+D G ++ Y LL + F +DPA+ +H + P E
Sbjct: 2908 QVVATDRDKQGPNSVISYSLLQ----PSDLFTVDPASGDIFSKRTLRYKHTKRPTSPENV 2963
Query: 81 -------------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHAT 126
LSS V + + D N+ P F+ Y + VPEG + +VHA+
Sbjct: 2964 YSLYVVATDNGRPPLSSKTLVYVSIVDSNNHAPRFEQRAYLYPVPEGYPTNKKIAQVHAS 3023
Query: 127 -DADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKAL 161
D D G NA + Y+V F V+ +G + NK+L
Sbjct: 3024 DDEDFGVNAEIEYTVAAGNGSEYFFVEPESGWLYVNKSL 3062
Score = 39.3 bits (90), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 17/127 (13%)
Query: 48 LVEYRLLDNNTDAASYFNLD-PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLP 106
LVE+R+ S F+L AT+ P Q S + VT N P F ++
Sbjct: 3062 LVEFRI-------GSAFSLKIRATDKGVPPQ-----SDEVWATLVVTGENRHAPTFVAVS 3109
Query: 107 YEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALD 162
Y+ VPE + + V+A D+D+G N +V Y + E F + TG + ALD
Sbjct: 3110 YQVRVPENEPVNTTILTVNAVDSDDGPNGMVRYEISAGNERHEFSIHPITGAVTILDALD 3169
Query: 163 YEKQQLY 169
Y+ Q Y
Sbjct: 3170 YDTVQEY 3176
>gi|327269958|ref|XP_003219759.1| PREDICTED: cadherin-7-like [Anolis carolinensis]
Length = 785
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 82/188 (43%), Gaps = 37/188 (19%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----- 70
Y A + +G +++QV ATD D +G V Y +L YF+++P T
Sbjct: 158 YTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQ----PYFSVEPKTGIIKT 213
Query: 71 -----------------EHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
+ + + GGLS T +V + +TD+ND P F Y+++VPE
Sbjct: 214 ALPNMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQYNVPE 273
Query: 114 GQD-GLAVGRVHATDADEGQNAVVYYSVPED-----IPFVVDANT--GDIRTNKALDYEK 165
V R+ A DAD G NA + Y + + +VD T G I K LDYE
Sbjct: 274 SLPVASVVARLKAADADMGPNAEMEYKIVDGDGLGVFKVLVDKETQEGIITIQKELDYEA 333
Query: 166 QQLYLERV 173
+ Y R+
Sbjct: 334 KASYTLRI 341
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIP 145
I++ DIND P+F PY VPE G +V +V ATDAD+ G +A V YS+ + P
Sbjct: 141 IKIQDINDNEPKFLDGPYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQP 200
Query: 146 -FVVDANTGDIRTN-KALDYEKQQLYL 170
F V+ TG I+T +D E + YL
Sbjct: 201 YFSVEPKTGIIKTALPNMDREAKDQYL 227
Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 114 GQDGLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLE 171
G D L VG++H +D D+G ++ Y E F++D NTGDI K LD E+Q Y
Sbjct: 62 GTDPLYVGKLH-SDVDKGDGSIKYILSGEGASSIFIIDENTGDIHATKRLDREEQAYYTL 120
Query: 172 R 172
R
Sbjct: 121 R 121
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 57/140 (40%), Gaps = 33/140 (23%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------- 68
S Y + + ++G + V A D D+ V Y + D NTD YFN+D
Sbjct: 379 SRLYTMVVSEAAKVGTVIGTVAAHDPDASN-SPVRYSI-DRNTDLERYFNIDANSGVITT 436
Query: 69 -----------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
A E Q P Q G V I + DIND PEF ++ YE +V
Sbjct: 437 AKPLDRETNAVHNITVLAMESQNPSQIGRGY-----VAITILDINDNAPEF-AMDYETTV 490
Query: 112 PE-GQDGLAVGRVHATDADE 130
E + G + R+ A D D+
Sbjct: 491 CENAEPGQVIQRISAVDKDD 510
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 8/136 (5%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP-IQDEGGLSSTATVNIRVTDINDK 98
DK++ + + + LD A+ ++ A + P G S TV I V D+ D+
Sbjct: 315 DKETQEGIITIQKELDYEAKASYTLRIEAANKQVDPRFLSLGPFSDMTTVKIIVEDV-DE 373
Query: 99 NPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP----FVVDANTG 153
P F S Y V E G +G V A D D N+ V YS+ + F +DAN+G
Sbjct: 374 PPVFTSRLYTMVVSEAAKVGTVIGTVAAHDPD-ASNSPVRYSIDRNTDLERYFNIDANSG 432
Query: 154 DIRTNKALDYEKQQLY 169
I T K LD E ++
Sbjct: 433 VITTAKPLDRETNAVH 448
>gi|190336809|gb|AAI62581.1| Protocadherin 1 gamma 2 [Danio rerio]
Length = 938
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 74/161 (45%), Gaps = 21/161 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGPI---------- 76
G +++V ATD D G G V Y + A F++D T +G I
Sbjct: 256 GTEIIRVSATDADEGPNGEVTYEFSRISDKTAKLFSIDKTTGQILVKGEIDYESEKNYEL 315
Query: 77 ----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+D GL+S A V I +TD+ND P +PE + G VG ++ D D G
Sbjct: 316 GIQAKDASGLASIAKVIIDITDVNDNPPRIILKSLNNPIPENSEPGAEVGIINVQDKDSG 375
Query: 132 QNAVVYYSVPEDIPFVVD---ANTGDIRTNKALDYEKQQLY 169
+N + SV +++PF ++ N + T KALD EK+ Y
Sbjct: 376 ENRQIRCSVQQNVPFKLNPSVKNYFSLVTTKALDREKESDY 416
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 79 EGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNA 134
+GGL S TA ++I V D ND P F Y+ ++ E G + RV ATDADEG N
Sbjct: 214 DGGLPQRSGTAVIHITVLDANDNVPVFDQPVYKVTLAENTPSGTEIIRVSATDADEGPNG 273
Query: 135 VVYY-----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y S F +D TG I +DYE ++ Y
Sbjct: 274 EVTYEFSRISDKTAKLFSIDKTTGQILVKGEIDYESEKNY 313
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 26/167 (15%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-----NTDAASYFNL------DPATEHQ 73
+ E G + + DKDSG+ + + N N +YF+L D E
Sbjct: 356 ENSEPGAEVGIINVQDKDSGENRQIRCSVQQNVPFKLNPSVKNYFSLVTTKALDREKESD 415
Query: 74 GPIQ---DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG-LAVGRVHAT 126
I +GG LS++ T+++ V+D+ND P F+ Y + E +V V A
Sbjct: 416 YNITITATDGGSPPLSTSMTIHLFVSDVNDNPPLFEQQVYSAYINENNKADTSVCSVSAN 475
Query: 127 DADEGQNAVVYYS-VPEDIPFV-------VDANTGDIRTNKALDYEK 165
D D QN V YS VP ++ V ++ +TG I ++ DYE+
Sbjct: 476 DPDWRQNGTVLYSLVPSEVSGVPVSSFLSINGDTGVIHAVRSFDYEQ 522
Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 23/107 (21%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ------------DGLAVGRVHATDAD 129
LSS TV + +TD ND +P+ + VP+G+ G V +V A DAD
Sbjct: 540 LSSNVTVKVFITDENDNSPQIL-----YPVPDGKTLMTEMVPKATLSGSLVSKVIAVDAD 594
Query: 130 EGQNAVVYYSVPEDIP---FVVDANTGDIRTNKAL---DYEKQQLYL 170
GQNA + Y + + F + ++G+I+T + + D KQ L +
Sbjct: 595 SGQNAWLSYQILKSTDPGLFTIGLHSGEIKTQRDISESDNMKQNLVI 641
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 91 RVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRV-HATDADEGQNAVVYYSVPEDIPFVVD 149
++ DIND P F + F + E D R+ A D+D G+N++ YS+ ++ FV+
Sbjct: 121 QIQDINDNTPRFPNERINFEITESADKGQRFRLDEAHDSDIGKNSINDYSLEKNEHFVLT 180
Query: 150 ANTGD------IRTNKALDYEKQQ 167
+T D + K LD E+Q+
Sbjct: 181 VHTADEEKYAELVLEKELDREQQK 204
>gi|363729524|ref|XP_417264.3| PREDICTED: protocadherin-16 [Gallus gallus]
Length = 3258
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 75/161 (46%), Gaps = 24/161 (14%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP--------------- 75
V L ++ATD D + G +EYR+ D D F LDP +
Sbjct: 1730 VALYTLRATDPDGDENGRLEYRVADG--DPEQDFILDPVSGVLSTARALDREQVAFYSLT 1787
Query: 76 --IQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
+QD G S+T TVN+RV D+ND P F Y VPE G V ++ A D DE
Sbjct: 1788 VVVQDHGTPPRSATMTVNVRVLDLNDNAPGFAQASYVVEVPEDLPVGSLVLQLEAEDPDE 1847
Query: 131 GQNA-VVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
G N V YY E + F ++ +G IR+ + LD E+Q Y
Sbjct: 1848 GTNGQVTYYLGNESLGMFQIEPQSGRIRSAQELDRERQPSY 1888
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 2/89 (2%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNA-VVYYSV 140
+ T+TV I +TD ND +P Y F+VPE Q G +VGRV A+D D GQN+ + Y +
Sbjct: 1064 TGTSTVRISITDENDNSPRLSEERYFFTVPENQAPGSSVGRVMASDRDAGQNSRLTYRLL 1123
Query: 141 PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D F++ TG++ T +LD E Q Y
Sbjct: 1124 QHDSNFLIHTQTGELSTKHSLDRELQSSY 1152
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 78/160 (48%), Gaps = 25/160 (15%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN----------------NTDAASY- 63
A R+ G + ++A D D+G FG ++Y +L+ N+ +
Sbjct: 2666 ASMRENLPPGTLVTTLRAIDTDTGVFGELQYAVLEQPAGGPGVAEGRDAFAINSSSGELR 2725
Query: 64 ----FNLDPATEHQGPIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QD 116
F+ + A Q ++ D G S+T TV + VT ++ +P F S + F VPEG
Sbjct: 2726 SRLTFDYERAKAFQLLVRATDAGNASATVTVRVLVTGEDEYDPIFLSPSFSFEVPEGAHK 2785
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDI 155
G ++GRV ATD DEG + VV YS+ + P F ++ TG I
Sbjct: 2786 GQSIGRVLATDEDEGADGVVLYSLAKPSPYFAINQTTGTI 2825
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 64/145 (44%), Gaps = 20/145 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-NTDAASYFNLDPATEHQG 74
S FY ++ +G +QV ATD DSG FG + Y L + + F++D T H
Sbjct: 557 SNFYNVSLKENTPVGTCFLQVTATDADSGLFGSLSYSLGSGIGSVVPTQFSIDKHTGHLC 616
Query: 75 PIQ------------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQ 115
Q D GGL+S V + + DIND P F L Y S+ +
Sbjct: 617 TTQPLDRDEGTSAYDFTITAVDGGGLNSMVYVKVFLEDINDNRPVFYPLDYAASISTQSM 676
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV 140
G AV RV A D DEG + V Y +
Sbjct: 677 PGTAVLRVTAHDKDEGMHGKVTYRI 701
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 78/162 (48%), Gaps = 26/162 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPI---------- 76
G ++QV A DKD G G V+Y ++ ++ +S+F +DPAT P+
Sbjct: 464 GSFVLQVTARDKDQGPNGEVQYSIVHSHDTHSSWFAIDPATGIITTAAPLDYEKDPQPQL 523
Query: 77 ----QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
D G LSS+A V + + D+ND P F+S Y S+ E G +V ATDAD
Sbjct: 524 TVLATDRGTPALSSSAVVLVALQDVNDNEPVFRSNFYNVSLKENTPVGTCFLQVTATDAD 583
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEK 165
G + YS+ I F +D +TG + T + LD ++
Sbjct: 584 SGLFGSLSYSLGSGIGSVVPTQFSIDKHTGHLCTTQPLDRDE 625
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 78/175 (44%), Gaps = 31/175 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-----ATEHQ 73
Y A + G ++QV ATD+D G G V Y L + F++ P T H
Sbjct: 1617 YEAHVMENLPAGSPVLQVLATDRDLGANGQVTYGGL-----SGGPFSIHPQTGLIVTTH- 1670
Query: 74 GPIQDE-------------GGLS---STATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG 117
P+ E GGL S ATV I V D ND P+ +S VPE Q
Sbjct: 1671 -PLDREEQEQHVLMVYAQDGGLPPNLSKATVRITVGDENDHTPQLESESCSVEVPENQSR 1729
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+A+ + ATD D +N + Y V + P F++D +G + T +ALD E+ Y
Sbjct: 1730 VALYTLRATDPDGDENGRLEYRVADGDPEQDFILDPVSGVLSTARALDREQVAFY 1784
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 79/175 (45%), Gaps = 22/175 (12%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA------- 69
L Y A + G +++V A DKD G G V YR++ N+ N D
Sbjct: 665 LDYAASISTQSMPGTAVLRVTAHDKDEGMHGKVTYRIVLGNSPPLFSLNKDTGVISLSWS 724
Query: 70 ------TEHQGPI--QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGL 118
T Q I +D GGL + A VNI V + P F+ Y F+VPE G
Sbjct: 725 LSGKANTLVQLVISAEDGGGLQAQPNARVNISVVEGTVSPPVFEQAQYFFTVPEDMLQGA 784
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYL 170
+VG V A + G ++YS+ P F +D++TG + T+ LD+E Q + +
Sbjct: 785 SVGAVRAQNP-PGHTDDIFYSISSGDPHGYFSIDSDTGQLHTSLPLDHESQAVLI 838
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQG 74
G + V A D D G+ G V Y L N D F+L+P+T +H
Sbjct: 1523 GFVALHVVAQDNDLGENGRVSYSLRAGNGDG--RFHLNPSTGALSVVRALNREEVVQHNL 1580
Query: 75 PI--QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
+ D G S+T ++I V D+ND+ P F+ YE V E G V +V ATD D
Sbjct: 1581 TVVAADHGFPRRSATQLLSILVLDVNDEAPTFEKPEYEAHVMENLPAGSPVLQVLATDRD 1640
Query: 130 EGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
G N V Y PF + TG I T LD E+Q+ ++ V+
Sbjct: 1641 LGANGQVTYGGLSGGPFSIHPQTGLIVTTHPLDREEQEQHVLMVY 1685
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVP 141
SS T+++ + DIND P F Y + E + G ++ +V A+DADEG N V Y +
Sbjct: 212 SSQMTLDVSIQDINDNAPAFNQSRYHTLISENLKPGSSILQVFASDADEGDNGDVIYEIN 271
Query: 142 E-----DIPFVVDANTGDIRTNKALDYEKQQLY 169
D F +D+ TG I+ NK LDYE ++++
Sbjct: 272 RRQSDPDQYFTIDSRTGVIKLNKGLDYEVRKVH 304
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 28/166 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNT---------DAASYFNLDPATEHQGP----- 75
G ++ +V A+D+D+G+ + YRLL +++ + ++ +LD E Q
Sbjct: 1099 GSSVGRVMASDRDAGQNSRLTYRLLQHDSNFLIHTQTGELSTKHSLD--RELQSSYQLLV 1156
Query: 76 -IQDEGG--LSSTATVNIRVTDINDKNPEF------QSLPYEFSVPEGQDGLAVGRVHAT 126
+QD G S+T T+ + V D ND P F Q LP + + E GL V + A
Sbjct: 1157 IVQDGGAPPRSATGTIYVTVLDENDNAPVFLHITGGQELPVQV-LEEKPSGLLVASLQAK 1215
Query: 127 DADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYL 170
D DEG+N + YS+ F + TG++RT L + Y+
Sbjct: 1216 DPDEGENGTITYSLTGAWAERFTLHTATGELRTATVLRRADRAEYV 1261
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 69/155 (44%), Gaps = 25/155 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA------SYFNL----- 66
FY + G L+ + ATD DSG G + + L + D A + F +
Sbjct: 2339 FYQVTLPEHTPAGSILLTMSATDMDSGSNGDITFHLAVPSLDVAIDPSNGTLFTIRPVEF 2398
Query: 67 ---DPATEHQGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAV 120
P E +D G LSS ATV ++V D+ND +P FQ Y SVPE + G V
Sbjct: 2399 DANQPTLELVVEARDRGSPSLSSWATVQLQVLDVNDHSPIFQVPHYNASVPEDLRPGTTV 2458
Query: 121 GRVHATDAD-EGQNAVVYYSVPEDIPFVVDANTGD 154
+ A DAD +NA Y+ +V N+G+
Sbjct: 2459 LTLDAGDADLSRENAGFDYT-------IVSGNSGN 2486
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSV 140
L + +T ++V DIND P F Y+ S+PE G V +V A D D+G N V YS+
Sbjct: 428 LRAESTFVLQVIDINDNPPLFDQQEYKQSIPEVVYPGSFVLQVTARDKDQGPNGEVQYSI 487
Query: 141 -----PEDIPFVVDANTGDIRTNKALDYEK 165
F +D TG I T LDYEK
Sbjct: 488 VHSHDTHSSWFAIDPATGIITTAAPLDYEK 517
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE-GQNAVVYYSV----P 141
V I V D ND+ P F P VPE Q G +V A D D G N+ V Y++ P
Sbjct: 1384 VQILVQDCNDQAPTFPEDPITIVVPENAQAGSSVFTFQALDGDGVGPNSQVRYALLRQEP 1443
Query: 142 EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
PF +D+ +G + +++LD E +L
Sbjct: 1444 PGAPFHLDSRSGLLSLHQSLDREAVASFL 1472
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIPF 146
+N+ + D+ND P FQ Y + E Q V +V A D D+G N V Y++ + +P
Sbjct: 2115 INLNLQDVNDNLPRFQLQNYVAFIWESQSYDSPVIQVLADDLDQGMNGQVTYAINQSLPM 2174
Query: 147 V----VDANTGDIRTNKALDYE 164
+D TG I T LD E
Sbjct: 2175 TGLYHIDPQTGTITTAAILDRE 2196
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE 142
S V I V+D+ND P F S +PE + G V + A D D G N V + +
Sbjct: 852 SNTRVKISVSDVNDNAPTFPSPSDSILLPEATEPGTTVYTLQAEDRDNGANGQVNFELVS 911
Query: 143 --DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
D F V+ ++G +R L YE Y R+ ++++
Sbjct: 912 GGDGTFSVERSSGAVRLVGVLQYEASAAY--RLSIVAR 947
Score = 39.7 bits (91), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 32/170 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQG 74
G L+++ A D DSG G V Y + ++ D F + +T H
Sbjct: 2571 GTELLRLTAHDADSGPRGHVHYSI--SSGDQHGLFQIHESTGALCLARPLDRETQASHAL 2628
Query: 75 PIQDE---GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADE 130
+Q GG + V I V D+ND P F S+ E G V + A D D
Sbjct: 2629 VVQATDVPGGHFALVPVAIEVKDVNDNKPYFPVEVLSASMRENLPPGTLVTTLRAIDTDT 2688
Query: 131 GQNAVVYYSV---PEDIP--------FVVDANTGDIRTNKALDYEKQQLY 169
G + Y+V P P F +++++G++R+ DYE+ + +
Sbjct: 2689 GVFGELQYAVLEQPAGGPGVAEGRDAFAINSSSGELRSRLTFDYERAKAF 2738
Score = 39.3 bits (90), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVP 141
S+T V I V D+ND P F Y +V E G + R+ A DAD G V+YS+
Sbjct: 2536 STTVPVLITVQDVNDNPPVFARAEYRTAVSESTPPGTELLRLTAHDADSGPRGHVHYSIS 2595
Query: 142 ---EDIPFVVDANTGDIRTNKALDYEKQ 166
+ F + +TG + + LD E Q
Sbjct: 2596 SGDQHGLFQIHESTGALCLARPLDRETQ 2623
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVP 141
SS T + VTD+ND P F S P SV E + G V A D D G+N V YS+
Sbjct: 1489 SSAVTARVFVTDVNDNAPVFLS-PAAVSVTEDRPTGFVALHVVAQDNDLGENGRVSYSLR 1547
Query: 142 E---DIPFVVDANTGDIRTNKALDYEK 165
D F ++ +TG + +AL+ E+
Sbjct: 1548 AGNGDGRFHLNPSTGALSVVRALNREE 1574
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 56/141 (39%), Gaps = 30/141 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y + + + G +++QV A+D D G G V Y + +D YF +D T G I+
Sbjct: 236 YHTLISENLKPGSSILQVFASDADEGDNGDVIYEINRRQSDPDQYFTIDSRT---GVIKL 292
Query: 79 EGGLS----------------------STATVNIRVTDINDKNPE----FQSLPYEFSVP 112
GL +TA V I V D ND P F S +
Sbjct: 293 NKGLDYEVRKVHELVVQARDRAVHPEVTTAFVTIHVRDYNDNQPTMTIIFLSEDGSPQIS 352
Query: 113 EG-QDGLAVGRVHATDADEGQ 132
EG Q G V R+ +D D G+
Sbjct: 353 EGAQPGQYVARISVSDPDYGE 373
Score = 36.2 bits (82), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNA-VVYYSVPED 143
A + + V D+ND P F Y+ ++PE G + + ATD D G N + ++
Sbjct: 2319 ANLTVIVEDMNDNAPAFSQPFYQVTLPEHTPAGSILLTMSATDMDSGSNGDITFHLAVPS 2378
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ +D + G + T + ++++ Q LE V
Sbjct: 2379 LDVAIDPSNGTLFTIRPVEFDANQPTLELV 2408
Score = 35.8 bits (81), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 66/169 (39%), Gaps = 25/169 (14%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGG------ 81
E G T+ ++A D+D+G G V + L+ S A G +Q E
Sbjct: 884 EPGTTVYTLQAEDRDNGANGQVNFELVSGGDGTFSVERSSGAVRLVGVLQYEASAAYRLS 943
Query: 82 ----------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG---QDGLAVGRVHATDA 128
LSST T+ + V +D P F +L Y V EG R A DA
Sbjct: 944 IVARDSGVPQLSSTFTLLVHVQAEHDNGPIFDTLTYRVEVREGVPVSTRFLQVRALARDA 1003
Query: 129 DEGQNAVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
++ + Y + D F + + +G + ALD E + LY+ V
Sbjct: 1004 ---EDVTLTYHLRADGDAASFGIMSESGWLYVKSALDRETRDLYVLTVL 1049
>gi|351708145|gb|EHB11064.1| Cadherin-12 [Heterocephalus glaber]
Length = 600
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 65/134 (48%), Gaps = 30/134 (22%)
Query: 33 LMQVKATDKDSGKFG---LVEYRLLDNNTDAASYFNLDPAT----------------EHQ 73
++QVKATD D +G V Y +L YF++DP T ++Q
Sbjct: 6 VLQVKATDADDPTYGNSARVVYSILQGQ----PYFSIDPKTGVIRTALPNMDREVKEQYQ 61
Query: 74 GPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
IQ + GGL+ T VNI +TD+ND P F + VPE G A+GR+ A
Sbjct: 62 VLIQAKDMGGQLGGLAGTTIVNITLTDVNDNPPRFPKSIFHLKVPESSSIGSAIGRIRAV 121
Query: 127 DADEGQNAVVYYSV 140
D D G+NA + Y++
Sbjct: 122 DPDFGKNAEIEYNI 135
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 67/153 (43%), Gaps = 17/153 (11%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL-- 82
+ +G + +++A D D GK +EY ++ D + F++ + Q EG +
Sbjct: 107 ESSSIGSAIGRIRAVDPDFGKNAEIEYNIVPG--DGGNLFDIVTDEDTQ-----EGVIKL 159
Query: 83 -SSTATVNIRVTDINDKNPEFQSLP-YEFSVPEGQD-GLAVGRVHATDADEGQNAVVY-- 137
TA V I V D+ + P S P Y V E G +G V A D D G +A+ Y
Sbjct: 160 KKDTARVKISVLDVEE--PLVFSKPLYTMEVFEDTPVGTIIGAVTAQDLDVGSSAIRYFI 217
Query: 138 -YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ D F VD G I TN+ LD E Y
Sbjct: 218 DWKSDGDRYFTVDGTGGTIATNELLDRESTAQY 250
>gi|156365971|ref|XP_001626915.1| predicted protein [Nematostella vectensis]
gi|156213808|gb|EDO34815.1| predicted protein [Nematostella vectensis]
Length = 850
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 19/156 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL------LDNNTDAASYFN-LDPATEHQGPI----Q 77
+G ++ ATD D G + Y + +++NT + + LD T+ +
Sbjct: 453 VGSVIVNATATDPDQGSNAAITYSMSYPGFAINSNTGSVTITRPLDRETKQAYSFTVHAR 512
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV----PEGQDGLAVGRVHATDADEGQN 133
D GGL S VN+ + D ND +P+F ++ Y+ V P G LA V+A D D G N
Sbjct: 513 DGGGLESNVAVNVEIGDENDNSPQFPTVQYQTDVIDRTPVGTIVLA---VNAEDRDVGNN 569
Query: 134 AVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V Y++ +PF++ +TG+I T+ LD E+Q LY
Sbjct: 570 GHVTYAILI-LPFIIVPDTGNINTSSKLDREQQSLY 604
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 64/134 (47%), Gaps = 23/134 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTD---AASYFNLDPAT---------EHQGPIQ 77
GV + VKATD D G G V+Y ++D N + S F LDP T E Q
Sbjct: 20 GVLIATVKATDSDDGANGDVDYSIVDGNVGDPRSNSDFTLDPNTGMIKTARNLERQQTFS 79
Query: 78 --------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
D G S+T V+I V D+ND NP F Y +V E G ++ V AT
Sbjct: 80 YNLTIGAADHGLPSFSATTRVSIVVGDLNDNNPVFNPTNYSTTVFENSPVGTSLLDVTAT 139
Query: 127 DADEGQNAVVYYSV 140
DAD GQNA V YSV
Sbjct: 140 DADSGQNAYVTYSV 153
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 82/189 (43%), Gaps = 27/189 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH---QGP 75
Y A + +G + V A D+DSG + Y L T F+++P+T Q
Sbjct: 648 YSATVLENMPVGTKVTMVTARDEDSGINSQIMYSL----TGGDGVFSIEPSTGQIRLQKA 703
Query: 76 IQDEGG----------------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ--DG 117
I E LSS A V++ V D+ND P F S YE ++ EG G
Sbjct: 704 INREAKENYHVTITASDRGTPVLSSDAKVHVHVLDVNDNPPVFTSRVYERTMSEGNAAAG 763
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
V +V+ATDAD +N V Y++ F ++ TG IRT L+ E + Y V
Sbjct: 764 EFVVQVNATDADVERNGHVTYTIMHGALGMFTINETTGVIRTQGVLNRESKDFYTLIVMA 823
Query: 176 ISKFATSYL 184
+ A Y+
Sbjct: 824 RDQGAVPYM 832
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 28/169 (16%)
Query: 25 DKHELGVTLMQVKATDKDSGKFGLVEYRLL---------DNNTDAAS------------- 62
D+ +G ++ V A D+D G G V Y +L N + +S
Sbjct: 548 DRTPVGTIVLAVNAEDRDVGNNGHVTYAILILPFIIVPDTGNINTSSKLDREQQSLYTLV 607
Query: 63 YFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
++ L+ + G Q +S A +NI VTD ND P+F Y +V E G V
Sbjct: 608 HYVLNLSVTDHGVTQ----FTSFALLNISVTDFNDNQPQFNQSEYSATVLENMPVGTKVT 663
Query: 122 RVHATDADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLY 169
V A D D G N+ + YS+ D F ++ +TG IR KA++ E ++ Y
Sbjct: 664 MVTARDEDSGINSQIMYSLTGGDGVFSIEPSTGQIRLQKAINREAKENY 712
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 80/194 (41%), Gaps = 45/194 (23%)
Query: 2 TPCPIPSALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL-------- 53
TP IPS+++ T + +G ++ +V A D DSG G + + +
Sbjct: 331 TPRFIPSSIQST---------ISEAASIGQSVARVTANDPDSGLNGRIFFSINSGSEGKF 381
Query: 54 --------------LDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKN 99
LD A N+ P + G TV + + D+ND
Sbjct: 382 EIGRSDGVVRVSGSLDREAKAVYVLNVSAIDGSYSPREGYG------TVTVTLQDVNDNT 435
Query: 100 PEFQSLPYEFSVPEGQDGLAVGRV----HATDADEGQNAVVYYSVPEDIPFVVDANTGDI 155
P+F + V E G+AVG V ATD D+G NA + YS+ F +++NTG +
Sbjct: 436 PKFTKPAFNVDVSE---GVAVGSVIVNATATDPDQGSNAAITYSMSYP-GFAINSNTGSV 491
Query: 156 RTNKALDYEKQQLY 169
+ LD E +Q Y
Sbjct: 492 TITRPLDRETKQAY 505
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS 139
G S A V I V D ND P F + ++ E G +V RV A D D G N +++S
Sbjct: 313 GHESLAEVVIHVLDANDNTPRFIPSSIQSTISEAASIGQSVARVTANDPDSGLNGRIFFS 372
Query: 140 V--PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
+ + F + + G +R + +LD E + +Y+ V I
Sbjct: 373 INSGSEGKFEIGRSDGVVRVSGSLDREAKAVYVLNVSAI 411
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 76/198 (38%), Gaps = 35/198 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y + +G +L+ V ATD DSG+ V Y + D+ F + G I+
Sbjct: 119 YSTTVFENSPVGTSLLDVTATDADSGQNAYVTYSVTAG--DSHGLFRAVTKVSNHGTIEV 176
Query: 79 EGGL-----------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
G L ++ A +R+ D ND P+F Y S+ E
Sbjct: 177 AGNLDREVNDFYNLTITATDGGVPISRTAIAIALVRILDRNDNVPKFSHARYTGSIQENS 236
Query: 116 D-GLAV---GRVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTN----KALDYEK 165
G+ V + ATD D NA V Y + + I F V+ TG I T +LD+E+
Sbjct: 237 GPGVPVQMASSIMATDRDIESNADVRYRLNGSDSIQFAVNPRTGVITTRVSPPPSLDHER 296
Query: 166 QQLYLERVFLISKFATSY 183
Y V + T +
Sbjct: 297 TTNYTFHVIAADQAGTGH 314
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 12/80 (15%)
Query: 100 PEFQSLPYEFSVPEGQD--GLAVGRVHATDADEGQNAVVYYSVPE--------DIPFVVD 149
P F Y + EG G+ + V ATD+D+G N V YS+ + + F +D
Sbjct: 1 PVFTPASYNATFTEGSSTRGVLIATVKATDSDDGANGDVDYSIVDGNVGDPRSNSDFTLD 60
Query: 150 ANTGDIRTNKALDYEKQQLY 169
NTG I+T + L E+QQ +
Sbjct: 61 PNTGMIKTARNL--ERQQTF 78
>gi|403304764|ref|XP_003942959.1| PREDICTED: cadherin-18-like [Saimiri boliviensis boliviensis]
Length = 567
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 53/98 (54%), Gaps = 8/98 (8%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYY 138
GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG++ A DAD G NA + Y
Sbjct: 23 GGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVGKIKANDADTGSNADMTY 82
Query: 139 SVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
S+ I + G + K L+YEK++ Y
Sbjct: 83 SIINGDGMGVFSISTDKETREGILSLKKPLNYEKKKSY 120
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 130 HLDFRFSHLGPFKD------ATMLKIIVGDV-DEPPLFSMPSYIMEVYENAKIGTVVGTV 182
Query: 124 HATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D + V Y Y+ +D F +DANTG I+T K LD E+ Y
Sbjct: 183 LAQDPDSANSLVRYFINYNAEDDRFFNIDANTGTIKTTKVLDREETPWY 231
>gi|393908503|gb|EJD75084.1| cadherin domain-containing protein [Loa loa]
Length = 4394
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 86/165 (52%), Gaps = 29/165 (17%)
Query: 33 LMQVKATDKD--SGKFGL--VEYRLLDNNTDAASYFNLDPAT-----------------E 71
+++V+A DKD S ++G+ V ++++ N S+F +D T E
Sbjct: 984 IIKVEAEDKDDLSNRYGITNVHFKIISGN--PQSFFAIDSKTGYIVTRGKRRLDHETQKE 1041
Query: 72 HQGPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATD 127
H ++ D+G L +T V I +TD+ND P F+ Y F+VP G G + R+ A D
Sbjct: 1042 HVIVVEFCDQGDPKLCTTVPVVITITDLNDNPPSFKQTTYNFNVPAGDIG-ELCRIFAID 1100
Query: 128 ADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLE 171
ADEGQNA++ Y+ E P F +D++ I ++ + E QL ++
Sbjct: 1101 ADEGQNALLLYNFTEADPRFSIDSDGRIITSDPLKENESYQLTVK 1145
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL-AVGRVHATDADEGQNAV 135
+D L +T VN+ VTD ND P F+ Y V + + +V A+DAD N+
Sbjct: 66 KDATNLETTVMVNLFVTDQNDAGPIFEKDEYRAEVKQNVPPFTTILQVQASDADVALNSQ 125
Query: 136 VYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYL 170
+YYS+ E + F+VD +G IR ++L +L L
Sbjct: 126 IYYSLVEWSLDFMVDPISGAIRNLRSLQSGTYELTL 161
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 64/164 (39%), Gaps = 29/164 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ----------- 77
G L+Q+KA D + + + + D D A Y ++D H G ++
Sbjct: 3056 FGKELLQLKAYGGDDKEVIIYQMQASD---DVAKYLSIDA---HSGLLKLASTLDFEKLE 3109
Query: 78 -----------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHA 125
E LSST +N+ + D+ND P F Y +V E Q G V +V A
Sbjct: 3110 KFAVTIIATDSGEPPLSSTCEINVEILDVNDNPPRFIQSIYRATVLENMQRGTKVVQVLA 3169
Query: 126 TDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
D D V Y + D+ G I T + LD E + Y
Sbjct: 3170 NDPDSEHFGRVSYLITNDVAAFTIGEDGWITTTEMLDREAKSTY 3213
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 73 QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEG 131
Q + G + + V I++ D ND P F LPYE ++P + G V V A DADEG
Sbjct: 1879 QARLLSGGNNRAQSIVTIKIEDRNDCQPHFIGLPYEPTIPRDVKPGYKVISVKAIDADEG 1938
Query: 132 QNAVVYYSV 140
N + Y +
Sbjct: 1939 FNGAIRYKL 1947
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVY-Y 138
G+ + + V IRV DI+D P F L Y SV E G + +V A D D N + Y
Sbjct: 2090 GVRAESYVVIRVHDISDTAPHFTQLLYTISVSESTAVGSELLKVEAIDPDIDDNYISYGI 2149
Query: 139 SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+ P +D G I K LDYE ++L+
Sbjct: 2150 TGPNASVLSMDPRNGAISLMKPLDYETERLF 2180
Score = 38.9 bits (89), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 66/167 (39%), Gaps = 40/167 (23%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLL----------------------DNNTDAASYFNLD 67
G ++ VKA D D G G + Y+L D N D+ S L+
Sbjct: 1924 GYKVISVKAIDADEGFNGAIRYKLKTSTNYFDINKYDGKIVISQSFEDANFDSVS---LE 1980
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTD-----INDKNPEFQSLPYEFSVPEGQDGLAVGR 122
E QG E LSS+ V I + D I ++ E L E + P G +V
Sbjct: 1981 VIAEDQG----EPSLSSSTHVVIHIVDRSIPIIGNRYQEAHIL--ENAAP----GSSVTN 2030
Query: 123 VHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
VHA G+ S +D F +D +TG I +KALD E Y
Sbjct: 2031 VHAISVVGGRIGYAIKSGNDDNRFKIDFDTGMISVHKALDREIHAFY 2077
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 76/178 (42%), Gaps = 27/178 (15%)
Query: 17 LFYGAM-----ARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT- 70
+FYG + A + +L T ++V D + G V ++ +N+ F++D T
Sbjct: 2936 VFYGIIQENSNATREEKLFATRLKVAVGDLEG--IGRVTFKYANNSNQYWDLFDIDNETG 2993
Query: 71 --EHQGPIQDE--------------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
P+ E G S+ A V I V D+ND P F+ Y +PE
Sbjct: 2994 IITAISPLDREVKDQYNFSVIAITATGNSAEAKVIIDVGDVNDNAPIFEQNIYHLRIPED 3053
Query: 115 QD-GLAVGRVHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
+ G + ++ A D+ + + +D+ +DA++G ++ LD+EK + +
Sbjct: 3054 ETFGKELLQLKAYGGDDKEVIIYQMQASDDVAKYLSIDAHSGLLKLASTLDFEKLEKF 3111
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 74/176 (42%), Gaps = 39/176 (22%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA---TEHQGPIQDEGGLSSTA 86
G +++ V A D D G ++Y ++DN + YF + P + P+ D G
Sbjct: 2440 GESVLMVFAFDCDVGD--ELKYSIVDNGELRSKYFAIHPKQGLISVKEPLNDLVG--EQL 2495
Query: 87 TVNIRVTDINDKNPEFQS-------------LP------YEFSVPE-GQDGLAVGRVHAT 126
++ IRVTD NP QS LP + FSVPE G VG H
Sbjct: 2496 SLFIRVTD--SANPPHQSETSVTLNISPIVHLPKFSTHHFLFSVPEDASIGTVVG--HLQ 2551
Query: 127 DADEGQNAVVYYSVP-----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
+ + V++S+ D PF + G I + LDYEK + E FL+S
Sbjct: 2552 QDSQLELPDVFFSLVTVDHLSDFPFTLKQENGQIVVSSMLDYEKTR---EIRFLVS 2604
>gi|47215506|emb|CAG01168.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1122
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 81/180 (45%), Gaps = 26/180 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD----------- 67
Y R+ E+G +M ++ATD D+ + Y+++ N+ S F +D
Sbjct: 338 YRVSIRENVEVGFEVMTIRATDGDAPSNANMVYKIV-NDDGVNSVFEIDSRNGLVRIRER 396
Query: 68 PATEHQGPIQ----------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QD 116
P E + Q D G S+TATVNI V D ND P+F Y VPE
Sbjct: 397 PDRETKDRYQLIVEANDQGKDPGPRSATATVNISVEDENDNYPQFSKKRYVVQVPENVAV 456
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ +V ATD DEG NA V+YS+ F + + TG I LDYE + Y R+
Sbjct: 457 NTKIIQVEATDQDEGNNAKVHYSIISGNIRGQFYIHSPTGVIDIINPLDYEMIREYSLRI 516
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 76/170 (44%), Gaps = 20/170 (11%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN--------- 65
D Y + +G +++ V A D+D +V Y++ NT
Sbjct: 611 DQKVYSLKINEDAIVGTSVLTVTAVDRDVN--SVVTYQISSGNTRNRFAITSQSGGGLIT 668
Query: 66 ----LDPATEHQGPIQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
LD E Q + +G TA V I VTD N P FQS Y+ ++ E + G
Sbjct: 669 LALPLDYKQERQYVLTITASDGTRYDTAQVFINVTDANTHRPVFQSANYQVTLSEDRPVG 728
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQ 166
V + ATD D G+NA + Y + +++P F +D +TG I T +DYE Q
Sbjct: 729 TTVMAISATDEDTGENARITYVMEDNVPQFKIDPDTGTITTQMEIDYEDQ 778
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 29/167 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYR---LLDNNTDAASYFNLDPATEH-------------- 72
G ++ VKATD D G+ G +EY +LD+ ++A +F +D T
Sbjct: 241 GTRVITVKATDPDDGEAGRLEYSMEAMLDSRSNA--FFEIDLRTGSITTSRPLDREFKDT 298
Query: 73 ---QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
+ + D G S+T+ + + V+D ND +P F+ Y S+ E + G V + AT
Sbjct: 299 HVFKVTVTDNGSPKRSATSYLTVTVSDTNDHSPVFEQNEYRVSIRENVEVGFEVMTIRAT 358
Query: 127 DADEGQNAVVYYSVPED----IPFVVDANTGDIRTNKALDYEKQQLY 169
D D NA + Y + D F +D+ G +R + D E + Y
Sbjct: 359 DGDAPSNANMVYKIVNDDGVNSVFEIDSRNGLVRIRERPDRETKDRY 405
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 70/160 (43%), Gaps = 22/160 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF------------NLD----PATEHQGP 75
+++Q+ A+D+DS G V Y + + LD P +
Sbjct: 833 SVLQISASDRDSSTNGRVSYTFQGGDDGEGDFIIETYSGIIRIARKLDRENVPVYNLKAF 892
Query: 76 IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQ 132
D G L + +++ V DIND P F+ V E G V R+ ATD DEG
Sbjct: 893 AVDRGVPPLKAAVPIHVVVQDINDNAPVFEKDVLFIDVEENSPVGSVVARITATDPDEGS 952
Query: 133 NAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLY 169
NA + Y + E +IP F +D GD+ + LDYE ++ Y
Sbjct: 953 NAQIMYQIVEGNIPEVFQLDIFNGDLVSLTDLDYETRKEY 992
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 28/184 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + +G T+M + ATD+D+G+ + Y + DN F +DP T
Sbjct: 717 YQVTLSEDRPVGTTVMAISATDEDTGENARITYVMEDN----VPQFKIDPDTGTITTQME 772
Query: 71 ---EHQGP-----IQDEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL- 118
E Q I + G+ S TA V I + D ND P+F Y+ +V E
Sbjct: 773 IDYEDQASFTLAIIAKDNGIPQKSDTAYVEIIILDANDNAPQFLRDMYQGTVLEDAPVFT 832
Query: 119 AVGRVHATDADEGQNAVVYYSVP----EDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174
+V ++ A+D D N V Y+ + F+++ +G IR + LD E +Y + F
Sbjct: 833 SVLQISASDRDSSTNGRVSYTFQGGDDGEGDFIIETYSGIIRIARKLDRENVPVYNLKAF 892
Query: 175 LISK 178
+ +
Sbjct: 893 AVDR 896
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 12/100 (12%)
Query: 97 DKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVP------EDIPFVVD 149
+ NP+FQ Y+ SVPE + G V V ATD D+G+ + YS+ + F +D
Sbjct: 220 NTNPQFQLPNYQVSVPENEPKGTRVITVKATDPDDGEAGRLEYSMEAMLDSRSNAFFEID 279
Query: 150 ANTGDIRTNKALDYEKQQLYLERVFLI-----SKFATSYL 184
TG I T++ LD E + ++ +V + + ATSYL
Sbjct: 280 LRTGSITTSRPLDREFKDTHVFKVTVTDNGSPKRSATSYL 319
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 83/174 (47%), Gaps = 25/174 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN--------LDP-----ATEHQGPIQDE 79
++QV+ATD+D G V Y ++ N Y + ++P E+ I+ +
Sbjct: 460 IIQVEATDQDEGNNAKVHYSIISGNIRGQFYIHSPTGVIDIINPLDYEMIREYSLRIKAQ 519
Query: 80 GG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
G ++ T V ++V D+ND P F S P++ +V E G +V + A D D G+N
Sbjct: 520 DGGRPPLINGTGMVVVQVVDVNDNTPMFVSTPFQATVLENVPVGYSVIHIQAIDGDSGEN 579
Query: 134 AVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSYL 184
A + Y + + PF ++ +TG I + LD Q++Y ++ + TS L
Sbjct: 580 ARLEYRLIDTTPGFPFTINNSTGWITVSDELD---QKVYSLKINEDAIVGTSVL 630
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 32/163 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----------DAASYFNLDPATEHQGPI- 76
+G + ++ ATD D G + Y++++ N D S +LD T + I
Sbjct: 936 VGSVVARITATDPDEGSNAQIMYQIVEGNIPEVFQLDIFNGDLVSLTDLDYETRKEYTIV 995
Query: 77 --QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF---------SVPEGQDGLAVGRVHA 125
L S ATV+IR+ D ND P Q F S P G +G+V A
Sbjct: 996 VQATSAPLVSRATVHIRLVDCNDNPPVLQDFEIIFNNYITNKSNSFPAG----IIGKVPA 1051
Query: 126 TDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEK 165
D D ++Y E +++ +TG++R +K LD +
Sbjct: 1052 RDPDVSDK--LHYKFETGNELSLLLLNEDTGELRLSKDLDNNR 1092
>gi|395526460|ref|XP_003765381.1| PREDICTED: protocadherin-16 [Sarcophilus harrisii]
Length = 3095
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 72/158 (45%), Gaps = 22/158 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQG 74
G + V A D D G+ + Y+L N+D +F+L P+T EH
Sbjct: 1350 GSVALYVVARDPDLGEAARLSYQLAGGNSDG--HFHLHPSTGALSITRPLDREQRAEHLL 1407
Query: 75 PI--QDEGGLSSTAT--VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
+ D G +AT + + V D+ND+ P F Y VPE + G V +HATD D
Sbjct: 1408 TVVAADHGSPPRSATQLLTVSVVDVNDEAPTFPQAAYHVHVPENRPPGTTVLTLHATDPD 1467
Query: 130 EGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQ 167
G N V Y F +D NTG + T + LD E+QQ
Sbjct: 1468 LGVNGQVTYGGVSGDTFSLDPNTGVLTTRQVLDREEQQ 1505
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 63/143 (44%), Gaps = 20/143 (13%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-NTDAASYFNLDPAT------ 70
FY A + G +QV ATD DSG FGL+ Y L ++ F +DP T
Sbjct: 368 FYNASLPEGTAPGTCFLQVTATDADSGPFGLLSYSLGAGLSSTGPPPFQIDPHTGEVCTS 427
Query: 71 ----EHQGPIQ--------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDG 117
QGP D GGL S V + V+D ND PEF Y SV + G
Sbjct: 428 RSLDRDQGPPSFDFTVTAVDGGGLKSLVYVKVFVSDENDNRPEFYPRIYAASVSTQSPPG 487
Query: 118 LAVGRVHATDADEGQNAVVYYSV 140
A+ RV A D D+G + + Y +
Sbjct: 488 TAILRVSAHDPDQGPHGTLTYRI 510
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 79/162 (48%), Gaps = 28/162 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQDE------- 79
G + +V A D D G G V Y ++ A +F +D +T P+ E
Sbjct: 275 GSFVARVTARDPDQGPNGNVAYSIVPGTH--AHWFAIDASTGVITTAAPLDYELEPRPQL 332
Query: 80 ------GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
GG LSSTA V++ + D+ND P F+ Y S+PEG G +V ATDAD
Sbjct: 333 TVLATDGGQPALSSTAVVHVVLQDVNDNEPVFKRTFYNASLPEGTAPGTCFLQVTATDAD 392
Query: 130 EGQNAVVYYSVPEDI------PFVVDANTGDIRTNKALDYEK 165
G ++ YS+ + PF +D +TG++ T+++LD ++
Sbjct: 393 SGPFGLLSYSLGAGLSSTGPPPFQIDPHTGEVCTSRSLDRDQ 434
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 75/159 (47%), Gaps = 27/159 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGPI-- 76
G T++ + ATD D G G V Y + +T F+LDP T E Q I
Sbjct: 1455 GTTVLTLHATDPDLGVNGQVTYGGVSGDT-----FSLDPNTGVLTTRQVLDREEQQEINL 1509
Query: 77 ----QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADE 130
QD G L S +V++ V D ND P F S VPEGQD + + A+D D
Sbjct: 1510 TVYAQDGGSPPLLSHVSVHVTVEDENDHAPAFGSSHLSLEVPEGQDPQTLTVLRASDPDI 1569
Query: 131 GQNAVVYYSVPE-DI--PFVVDANTGDIRTNKALDYEKQ 166
G N + Y + D+ F++DA +G + T ++LD E +
Sbjct: 1570 GPNGQINYQILNGDVSGAFILDAVSGTLGTARSLDREAE 1608
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 24/160 (15%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD------------- 78
TL ++A+D D G G + Y++L N D + F LD + G +
Sbjct: 1558 TLTVLRASDPDIGPNGQINYQIL--NGDVSGAFILDAVSGTLGTARSLDREAEPSFQLLV 1615
Query: 79 ---EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEG 131
+GG LS+T V + V D ND P F + Y VPE G + ++ A D D G
Sbjct: 1616 AARDGGQPALSATMLVTVAVLDANDHAPTFTAPSYTVEVPEDAPPGTLLLQLEAHDPDAG 1675
Query: 132 QNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
N V Y + E F+++ +G++RT LD E+Q Y
Sbjct: 1676 ANGRVAYYLGEGAGGAFLLEPGSGELRTAVPLDRERQARY 1715
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 25/151 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTD---AASYFNLDPATEHQGPIQ--------- 77
G + + A DKD+G FG + Y LL+ A+++++ G ++
Sbjct: 2510 GTLITTLHALDKDTGAFGQLHYTLLEPGLGQGLGATHWDMFALNGSSGELRARVPFDYEH 2569
Query: 78 -----------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHA 125
D G LS++ T+++ VT ++ +P F + + F VPEG + G ++G V A
Sbjct: 2570 TRSFRLLVGAADAGNLSASVTLSVLVTGEDEYDPVFLAPSFHFQVPEGARRGYSLGHVLA 2629
Query: 126 TDADEGQNAVVYYSVPEDIP-FVVDANTGDI 155
TD D G + VV YS+ P F ++ TG +
Sbjct: 2630 TDEDGGADGVVLYSLSAPSPYFGINQTTGAL 2660
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVY 137
+G L+ TATV + + D ND P P +V E Q G GR+ ATD D G N +
Sbjct: 873 QGSLTGTATVRVSIQDRNDHGPRLTEEPTFLAVAENQPPGTTAGRITATDRDSGPNGHLT 932
Query: 138 YSV----PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y + E F + TG++ T ++LD E+Q Y
Sbjct: 933 YHLLQPPDESGAFHIHPQTGEVTTRRSLDREQQSSY 968
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 78/169 (46%), Gaps = 29/169 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G T ++ ATD+DSG G + Y LL D + F++ P T E Q
Sbjct: 912 GTTAGRITATDRDSGPNGHLTYHLL-QPPDESGAFHIHPQTGEVTTRRSLDREQQSSYQL 970
Query: 76 ---IQDEGG--LSSTATVNIRVTDINDKNPEF------QSLPYEFSVPEG-QDGLAVGRV 123
+QD G S+T TV++ V D+ND +P F + V EG G V R+
Sbjct: 971 LVQVQDGGAPPRSTTGTVHVMVLDLNDNSPTFLHTLGAAGGGFPVQVLEGIPPGSLVTRL 1030
Query: 124 HATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
A D DEG+N + YS+ P F++ ++G++ T L ++ Y+
Sbjct: 1031 QAKDPDEGENGTILYSMTGPGSELFLLHPHSGELSTAGPLSRLERPHYV 1079
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 34/172 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EHQ 73
+G L++V A+D D G GLV + + ++ D A F LD ++ +HQ
Sbjct: 2405 VGTELLRVAASDADPGPHGLVYFTI--SSGDPAHLFELDESSGALRLARQLDREAQAQHQ 2462
Query: 74 GPIQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDAD 129
++ G + V + V D+N+ P F L S+PE Q G + +HA D D
Sbjct: 2463 LVVEAADPPGAHFALVPVTVEVQDVNEHGPAFPLLTLSASLPENQPPGTLITTLHALDKD 2522
Query: 130 EGQNAVVYYSVPE------------DIPFVVDANTGDIRTNKALDYEKQQLY 169
G ++Y++ E D+ F ++ ++G++R DYE + +
Sbjct: 2523 TGAFGQLHYTLLEPGLGQGLGATHWDM-FALNGSSGELRARVPFDYEHTRSF 2573
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
S++ V I V D+ND P F Y +VPE G + RV A+DAD G + +VY+++
Sbjct: 2371 STSVLVVITVQDVNDNPPVFAQPHYRVAVPEDTPVGTELLRVAASDADPGPHGLVYFTIS 2430
Query: 142 EDIP---FVVDANTGDIRTNKALDYEKQ---QLYLE 171
P F +D ++G +R + LD E Q QL +E
Sbjct: 2431 SGDPAHLFELDESSGALRLARQLDREAQAQHQLVVE 2466
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 48/91 (52%), Gaps = 11/91 (12%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFS-VPE-GQDGLAVGRVHATDADEGQNAVVYYS 139
L + A + + VTD+ND P F L Y+ +PE G V RV A D D+G N V YS
Sbjct: 238 LRAEAALVLLVTDVNDNAPAFDRLLYQPEPLPEVVLPGSFVARVTARDPDQGPNGNVAYS 297
Query: 140 VPEDIP------FVVDANTGDIRTNKALDYE 164
+ +P F +DA+TG I T LDYE
Sbjct: 298 I---VPGTHAHWFAIDASTGVITTAAPLDYE 325
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 68/176 (38%), Gaps = 31/176 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI-- 76
Y A + L L++V+A D D G G V Y L ++ F++DPA G I
Sbjct: 1969 YAAFVPESRPLSGPLLKVEADDLDQGPGGQVTYSLAPSHA-TRGLFHIDPA---MGTITT 2024
Query: 77 ------------------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
D G L +AT+ + V D ND P P+E VPE
Sbjct: 2025 TAILDREIWAETRLVVMATDRGSPPLVGSATLTVLVIDANDNRPTIPQ-PWEIQVPEDAL 2083
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
G + RV D D G A+ Y P PF V G I + LD+E Y
Sbjct: 2084 LGSEIARVTGNDVDSGP-ALWYVLNPPGTQGPFSVGRYGGRISLTEPLDFEHMDCY 2138
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 66/160 (41%), Gaps = 33/160 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQGPIQDE------- 79
G L+Q++A D D+G G V Y L + A F L+P + P+ E
Sbjct: 1661 GTLLLQLEAHDPDAGANGRVAYYLGEG---AGGAFLLEPGSGELRTAVPLDRERQARYGF 1717
Query: 80 ----------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR------- 122
G LS++ +V I V D+ND P F + P + + L G
Sbjct: 1718 VVHAVDGAAAGPLSASVSVTITVRDVNDHAPAFPASPLRLRLRPTRTALGQGSSGPHFLA 1777
Query: 123 -VHATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNK 159
+ A D D G NA + Y + P VD+ TG+IR +
Sbjct: 1778 TLRAEDRDAGANASILYRLAGPAPPGASVDSYTGEIRLPR 1817
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 27/134 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH----QGPIQDEGGL--- 82
G ++ + ATD DSG G V Y L+ + A F++DP+ Q Q GGL
Sbjct: 2185 GSAILTISATDLDSGDNGRVSYHLVSS----AEGFDIDPSNGTLFMIQAASQSLGGLGTV 2240
Query: 83 --------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATD 127
++ ATV+I++ D ND P F Y +V E G V + ATD
Sbjct: 2241 DMVLEARDHGVPRRTAQATVHIQLQDENDYTPSFVQPYYHITVAEDLPPGSTVLILEATD 2300
Query: 128 ADEGQ-NAVVYYSV 140
AD+ + +A + Y++
Sbjct: 2301 ADQSRPHATLDYAI 2314
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 6/140 (4%)
Query: 5 PIPSALEMTSDSLFYGAMAR---DKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA 61
P P +++ D+L +AR + + G L V G F + Y + T+
Sbjct: 2071 PQPWEIQVPEDALLGSEIARVTGNDVDSGPALWYVLNPPGTQGPFSVGRYGGRISLTEPL 2130
Query: 62 SYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAV 120
+ ++D H + +G +A + I+V D+ND P F Y+ ++ E G A+
Sbjct: 2131 DFEHMDCYQLHL--LARDGQHEGSANLTIQVEDVNDNVPTFSQSLYQVTLAEHTTPGSAI 2188
Query: 121 GRVHATDADEGQNAVVYYSV 140
+ ATD D G N V Y +
Sbjct: 2189 LTISATDLDSGDNGRVSYHL 2208
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYE--FSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE- 142
A V + + D+ND P F S P + + P+ G V + ATD D G N V +++
Sbjct: 664 ARVRVLLEDVNDNAPAFPS-PTDTVWLPPDAGPGTPVYTLRATDPDSGSNGHVTFTLVAG 722
Query: 143 -DIPFVVDANTGDIRTNKALDYEKQQLYLE 171
F VD TG ++ + L Q+L LE
Sbjct: 723 GKGAFAVDPATGHVQLVRPLGGLAQELELE 752
Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 53/128 (41%), Gaps = 22/128 (17%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD---------- 67
Y A + G +++V A D D G G + YR+L N+ F LD
Sbjct: 475 IYAASVSTQSPPGTAILRVSAHDPDQGPHGTLTYRILAGNS--PPLFALDKDSGLVSVAW 532
Query: 68 PAT-------EHQGPIQDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDG 117
P T + + +QD GGL + A VNI + P F+ Y FS+ E G
Sbjct: 533 PLTGRADAVQQLEIGVQDAGGLRAEPNAHVNISIISGPLMPPVFEQAQYVFSMLEDVPPG 592
Query: 118 LAVGRVHA 125
+VG + A
Sbjct: 593 TSVGTIRA 600
>gi|345793728|ref|XP_544301.2| PREDICTED: protocadherin beta-6 [Canis lupus familiaris]
Length = 796
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 75/172 (43%), Gaps = 21/172 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y + LG ++ V A D D+G FG V Y L + D F + T
Sbjct: 247 LYETQIPENSTLGSLIITVSARDLDAGPFGEVSYALFQVD-DVNQPFEIHAITGEIRLRK 305
Query: 71 -----EHQG-----PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
E Q D GGLS ++ I+V D+ND P+ + ++PE + V
Sbjct: 306 TLDFEEFQSYHVDIEATDGGGLSGKCSLVIKVLDVNDNTPQLTMSSFTSAIPENLPEIIV 365
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
+DAD GQN V S+ +++PF++ + + + TN ALD E Q Y
Sbjct: 366 AVFSVSDADSGQNQQVICSIDDNLPFLLRPSVENFYTLVTNGALDRESQAEY 417
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
S T + I V DIND PEF YE +PE G + V A D D G V Y++
Sbjct: 224 SGTVEIQILVLDINDNAPEFAQELYETQIPENSTLGSLIITVSARDLDAGPFGEVSYALF 283
Query: 142 E----DIPFVVDANTGDIRTNKALDYEKQQLY 169
+ + PF + A TG+IR K LD+E+ Q Y
Sbjct: 284 QVDDVNQPFEIHAITGEIRLRKTLDFEEFQSY 315
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L + + + V+D+ND P F Y V E L +G V ATD D G NA V YS+
Sbjct: 431 LKTQHNITVTVSDVNDNAPAFSQTTYTLRVRENNSPALHIGTVSATDRDAGANAQVTYSL 490
Query: 141 --PED--IPFV----VDANTGDIRTNKALDYEKQQLYLERV 173
P D +P ++A+ G + ++LDYE Q + RV
Sbjct: 491 LRPRDPHLPLASLVSINADNGQLFALRSLDYEALQAFEVRV 531
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 70/175 (40%), Gaps = 32/175 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL-------------DNNTDAASYFN 65
Y R+ + + + V ATD+D+G V Y LL N D F
Sbjct: 456 YTLRVRENNSPALHIGTVSATDRDAGANAQVTYSLLRPRDPHLPLASLVSINADNGQLFA 515
Query: 66 LDP-------ATEHQGPIQDEG--GLSSTATVNIRVTDINDKNP------EFQSLPYEFS 110
L A E + D G LSS A V + V D ND P + S P
Sbjct: 516 LRSLDYEALQAFEVRVGAADRGSPALSSQALVRVLVLDDNDNAPFVLYPLQNGSAPCTEL 575
Query: 111 VPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL 161
VP + G V +V A D D GQNA + + + E F V A+ G++RT + L
Sbjct: 576 VPRAAEAGYLVTKVVAVDGDSGQNAWLSFQLLKATEPGLFGVWAHNGEVRTARLL 630
>gi|307194559|gb|EFN76851.1| Cadherin-related tumor suppressor [Harpegnathos saltator]
Length = 1801
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
L A V I +TD+ND P+FQ LPY SV EG G + RV+ TDADEG N V+YS+
Sbjct: 1222 LRDRAKVTIYITDVNDNVPQFQRLPYRVSVSEGAIIGTQLLRVYTTDADEGLNGDVFYSL 1281
Query: 141 P---EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ F++D TG I K LD E Y+
Sbjct: 1282 ENGNQHGHFMIDEATGQISLVKELDRETFDSYV 1314
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVP 141
S+TA + I V D+ND P FQ Y + E G V + ATDAD G NA ++Y
Sbjct: 480 STTAYLVIHVNDVNDHEPVFQRSEYSAVLSELSPIGSFVASISATDADSGVNAKIHYEFA 539
Query: 142 ---EDIPFVVDANTGDIRTNKALDYE 164
E F +D NTG + T LD E
Sbjct: 540 KGNEQHWFAIDGNTGLVTTVATLDRE 565
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 73/175 (41%), Gaps = 36/175 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVE-YRLLDNNTDA---------------------------- 60
G L+ A DKD+ + G+++ Y ++D NTD
Sbjct: 172 GTKLLLDAAMDKDTPENGVLDDYYIVDGNTDGKFRLQVTDNPTGETSYLHLETTGKLDRE 231
Query: 61 -ASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
Y++L+ +G G L VN+ V D+ND P FQ Y S+ E G
Sbjct: 232 QVEYYSLNICARDRGQPPRLGYL----LVNVTVLDVNDNPPVFQQSDYVVSLNESAPIGT 287
Query: 119 AVGRVHATDADEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLYLER 172
V VHATD D N+ + Y +P+ + F +D TG I T + L +Q + R
Sbjct: 288 KVLAVHATDKDSEDNSKLTYYLPDNERKFTIDPETGTITTAEPLKCPEQVCTVSR 342
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 73/160 (45%), Gaps = 28/160 (17%)
Query: 18 FYGAMARD---KHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG 74
F+ ++ARD L V Q+ T D + + EYR+L D QG
Sbjct: 643 FHPSVARDYPNTFALDVLTGQL-TTKTDLDRETIAEYRILVIARD-------------QG 688
Query: 75 -PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVGRVHATDADEGQ 132
P+Q SSTATV + V D+ND +P F Y + P+ G +G+V A DAD +
Sbjct: 689 IPVQ-----SSTATVVLTVDDVNDNSPIFYPWRYLMPIPPDAAPGTVLGKVTANDADARK 743
Query: 133 NAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
NA V Y + E + F VD TG+I + + LY
Sbjct: 744 NAQVKYFLQYGGEGL-FAVDERTGEIILQSSFRLVHKILY 782
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 71/165 (43%), Gaps = 26/165 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD---------- 78
+G L++V TD D G G V Y L N + +F +D AT +++
Sbjct: 1257 IGTQLLRVYTTDADEGLNGDVFYSL--ENGNQHGHFMIDEATGQISLVKELDRETFDSYV 1314
Query: 79 ----------EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
E LSS+ATV++ V D ND P F + +V E + R ATD
Sbjct: 1315 LTVVAHDAGLETRLSSSATVHVEVLDENDNVPRFVDNRPKIAVLETAPINTELLRFKATD 1374
Query: 128 ADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
D G N+ + +++ F +D +G + K LDYE+ Y
Sbjct: 1375 NDLGLNSELSFAISAGNRKDTFYIDPLSGTLYLRKPLDYEELMRY 1419
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 76/186 (40%), Gaps = 30/186 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A+ + +G + + ATD DSG + Y N +F +D T
Sbjct: 504 YSAVLSELSPIGSFVASISATDADSGVNAKIHYEFAKGN--EQHWFAIDGNTGLVTTVAT 561
Query: 71 ---EHQGPIQ------DEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQ-DGL 118
E +G I+ D G A +++VT D ND+ P F ++PE
Sbjct: 562 LDREVKGSIELHVSAWDGGPNPKYAHTHLKVTILDENDEAPSFSQSMINVTLPENTPPNS 621
Query: 119 AVGRVHATDADEGQNAVVYY----SVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLER 172
V V A D D+G N + Y SV D P F +D TG + T LD E Y R
Sbjct: 622 LVATVTAVDNDQGTNGSIAYSFHPSVARDYPNTFALDVLTGQLTTKTDLDRETIAEY--R 679
Query: 173 VFLISK 178
+ +I++
Sbjct: 680 ILVIAR 685
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 22/152 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------------------ATEHQG 74
+ A D D G G V Y + D N A F + P A E
Sbjct: 1048 FFSLTAIDSDFGANGQVFYSVTDGN--AEGRFGIFPDGKLYVKQELDREQQDYYALEVTA 1105
Query: 75 PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
Q + SS + + + D ND PEF + + F + E + VG++ ATD D G+N
Sbjct: 1106 SDQGQPPRSSVVPMVVHIIDENDNAPEFINSSFSFHLRENEPPDTFVGKLLATDRDVGRN 1165
Query: 134 AVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
A + +S+P F+VD G I++ + D E
Sbjct: 1166 ADLIFSLPSSQQDFIVDPKNGFIKSLRVFDRE 1197
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 73/184 (39%), Gaps = 43/184 (23%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLD 67
D +F A E+ +T +A D DSG + Y L N N ++ +
Sbjct: 930 DEIFLNENAAVGQEVCLT----RARDWDSGVNARIVYSLTHNPGKQFRVNENSGIIYLGK 985
Query: 68 PATEHQGPI-------QDEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEG---- 114
P G + D G L +A +RVT D+ND P F+ YE S+PE
Sbjct: 986 PIKAPPGTVLHLEVTATDTGRLPLSAQYQVRVTIQDVNDHTPVFKLTSYETSLPESTPVN 1045
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANT---------GDIRTNKALDYEK 165
+D ++ A D+D G N V+YS V D N G + + LD E+
Sbjct: 1046 EDFFSLT---AIDSDFGANGQVFYS-------VTDGNAEGRFGIFPDGKLYVKQELDREQ 1095
Query: 166 QQLY 169
Q Y
Sbjct: 1096 QDYY 1099
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 70/184 (38%), Gaps = 42/184 (22%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNN-TDAASYFNLDPAT---EHQGPIQDE--------- 79
++ + A D DSG+ G+V Y +L + D F ++P+T PI E
Sbjct: 1472 IVTITAEDPDSGENGVVSYSILSQDPEDEVRRFGINPSTGVIHTLQPIDREEVDAFKLMV 1531
Query: 80 ----------GGLSSTATVNIRVTDINDKNPEFQSL--------------PYEFSVPEGQ 115
LS+ V + V DIND P F S+ P + +
Sbjct: 1532 VATDQAEPPSARLSAEKQVIVIVEDINDNAPIFVSMSAVVLPKYVGNPKYPQHYLQHQSS 1591
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP-----FVVDANTGDIRTNKALDYEKQQLYL 170
+ + V R+ A D D N +V Y + F + N+GD+ + K +
Sbjct: 1592 EEIMVTRLFARDLDSSTNGLVTYELLRSSGNYSDMFRIHRNSGDLIMRPPYSFGKIAHHP 1651
Query: 171 ERVF 174
ERVF
Sbjct: 1652 ERVF 1655
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 13/94 (13%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVG----RVHATDADEGQNAVVY 137
LSS ++ + V D ND P F P V + ++G+ V + A D D G+N VV
Sbjct: 1433 LSSVTSLIVEVIDANDNPPVF---PNTAIVRQIREGILVRTPIVTITAEDPDSGENGVVS 1489
Query: 138 YSV----PED--IPFVVDANTGDIRTNKALDYEK 165
YS+ PED F ++ +TG I T + +D E+
Sbjct: 1490 YSILSQDPEDEVRRFGINPSTGVIHTLQPIDREE 1523
>gi|443684188|gb|ELT88197.1| hypothetical protein CAPTEDRAFT_144547 [Capitella teleta]
Length = 654
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 83/179 (46%), Gaps = 36/179 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + +G + QV ATDKD+G ++Y L + D AS+F++
Sbjct: 353 YSATLIENSYIGAFVTQVNATDKDAGPNADIKYSL---SGDHASFFSISDTGRVTARRSM 409
Query: 69 -------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ 115
AT+H P + SS+A V I + D+ND+ P F + FS+ E +
Sbjct: 410 DHEEHENFQLYVNATDHGSPRR-----SSSALVVISIEDVNDETPTFTESLFSFSIEENK 464
Query: 116 -DGLAVGRVHATDADEGQNAVVYYS----VPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G VG+V A D D N ++ V D F++D TG +++ +LD EKQ +Y
Sbjct: 465 PSGEYVGQVAAEDRDSPPNNSFLFTMRPGVGVDEAFLLDPLTGSLKSRTSLDREKQSVY 523
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 67/144 (46%), Gaps = 15/144 (10%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYF--NLDPATEHQGPIQ----DEGGLSSTATVNIRVT 93
D KF L + LD +TD +LD E IQ D GG + + V + V
Sbjct: 64 DTPKSKFALRVTKKLDGSTDVRLVLKRSLDREQESSFSIQIVAFDGGGETGSLEVKVTVL 123
Query: 94 DINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYY-------SVPEDIP 145
D ND +P F + YE S+ E + + RVHATD D G+N V Y S DI
Sbjct: 124 DSNDHDPVFVNATYEVSISEKTPAKSMIMRVHATDQDIGENGEVIYGFSSQTESTYGDI- 182
Query: 146 FVVDANTGDIRTNKALDYEKQQLY 169
F +D +G+I K LD+E +Y
Sbjct: 183 FGIDQESGEIYIKKELDHETSPVY 206
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 21/171 (12%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDP-- 68
++ R+ + + V D D+G G V L DN+ A ++ LD
Sbjct: 251 SLIREDSPVDTFVAHVTVNDPDAGNNGRVNCTLNDNSFKLARRYDNEYQVLTAKVLDREM 310
Query: 69 -ATEHQGPIQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRV 123
A + I +GG L + + + + D+ND +P F Y ++ E G V +V
Sbjct: 311 IAKYNLALICKDGGSDPLIAIQHLQVNIDDVNDNSPIFGQTSYSATLIENSYIGAFVTQV 370
Query: 124 HATDADEGQNAVVYYSVPED-IPFVVDANTGDIRTNKALDYEKQ---QLYL 170
+ATD D G NA + YS+ D F ++TG + +++D+E+ QLY+
Sbjct: 371 NATDKDAGPNADIKYSLSGDHASFFSISDTGRVTARRSMDHEEHENFQLYV 421
>gi|358412578|ref|XP_600703.6| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Bos
taurus]
Length = 2760
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 76/159 (47%), Gaps = 20/159 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-------------LDPATEHQ-- 73
+G +++ ++A D+D+ ++ Y+L NT + LD E Q
Sbjct: 444 VGSSVLTLRALDRDANS--VITYQLTGGNTRNRFALSSQSGGGLITLALPLDYKQERQYV 501
Query: 74 -GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
+G S TA V I VTD N P FQS Y SV E + G ++ + ATD D G
Sbjct: 502 LAVTASDGMRSHTAQVFINVTDANTHRPVFQSSHYTVSVSEDRPVGTSIATISATDEDTG 561
Query: 132 QNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+NA + Y + + +P F +D +TG + T LDYE Q Y
Sbjct: 562 ENARITYVLEDPVPQFRIDPDTGTVYTMTELDYEDQAAY 600
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 35/168 (20%)
Query: 32 TLMQVKATDKDSGKFGLVEY------------------------RLLDNNTDAASYFNLD 67
+++QV ATD+DSG G + Y R LD A +NL
Sbjct: 652 SVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRENVAV--YNLR 709
Query: 68 P-ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHA 125
A + P+ LS++ + + V DIND P F+ E V E G V R+ A
Sbjct: 710 ALAVDRGSPVS----LSASVEIQVTVLDINDNPPVFEKDELELFVEENSPVGSVVARIRA 765
Query: 126 TDADEGQNAVVYYSVPE-DIP--FVVDANTGDIRTNKALDYEKQQLYL 170
+D DEG NA + Y + E ++P F +D +GD+R LD+E +Q Y+
Sbjct: 766 SDPDEGPNAQIMYQIVEGNVPEVFQLDLLSGDLRALVELDFEARQEYV 813
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 77/187 (41%), Gaps = 28/187 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y + +G ++ + ATD+D+G+ + Y L D F +DP T
Sbjct: 533 SSHYTVSVSEDRPVGTSIATISATDEDTGENARITYVL----EDPVPQFRIDPDTGTVYT 588
Query: 71 ------EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E Q +D G S T ++ I + D ND P F Y+ SV E
Sbjct: 589 MTELDYEDQAAYTLAITARDNGIPQKSDTTSLEILILDANDNAPRFLRDFYQGSVFEDAP 648
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV----PEDIPFVVDANTGDIRTNKALDYEKQQLYLE 171
+V +V ATD D G N + Y+ D F ++ +G IRT + LD E +Y
Sbjct: 649 PSTSVLQVSATDRDSGPNGRLLYTFQGGDDGDGDFYIEPTSGVIRTQRRLDRENVAVYNL 708
Query: 172 RVFLISK 178
R + +
Sbjct: 709 RALAVDR 715
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 21/109 (19%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
++S+ V+++V D+ND P F S P++ +V E G +V + A DAD G+NA + Y +
Sbjct: 287 INSSGLVSVQVLDVNDNAPIFVSSPFQAAVLENVPLGHSVLHIQAVDADAGENARLRYRL 346
Query: 141 PE--------------------DIPFVVDANTGDIRTNKALDYEKQQLY 169
+ D PF + ++G I LD E+ + Y
Sbjct: 347 VDTASASVGGGGAAPAAPAPAADFPFQIHNSSGWITVCAELDREEVEHY 395
>gi|351697094|gb|EHB00013.1| Cadherin-24 [Heterocephalus glaber]
Length = 814
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 86/185 (46%), Gaps = 31/185 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV A D D +G +L+ D +F++DP T
Sbjct: 155 YHATVPEMSNVGTSVIQVTAHDADDPSYG-NSAKLVYTVLDGLPFFSVDPQTGVVRTAIP 213
Query: 71 --------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E IQ + GGLS + TV + ++D+ND P+F Y+FSV E +
Sbjct: 214 NMDRETQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQGLYQFSVVETAE 273
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV-----PEDIPFVVDANTGD--IRTNKALDYEKQQL 168
G+ VGR+ A D D G NA++ YS+ E D+ D + K LD+E ++
Sbjct: 274 PGVLVGRLQAQDPDLGDNALMAYSILDGEGSEAFSIGTDSQGRDGLLTVRKPLDFETRRS 333
Query: 169 YLERV 173
Y RV
Sbjct: 334 YSFRV 338
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 63/127 (49%), Gaps = 22/127 (17%)
Query: 50 EYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF 109
+Y LL D AS L+P +E I+V DIND P F PY
Sbjct: 114 QYVLLAQAVDRASNRPLEPPSEF----------------IIKVQDINDNPPVFPLGPYHA 157
Query: 110 SVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIPFV-VDANTGDIRTN-KALDY 163
+VPE + G +V +V A DAD+ G +A + Y+V + +PF VD TG +RT +D
Sbjct: 158 TVPEMSNVGTSVIQVTAHDADDPSYGNSAKLVYTVLDGLPFFSVDPQTGVVRTAIPNMDR 217
Query: 164 EKQQLYL 170
E Q+ +L
Sbjct: 218 ETQEEFL 224
>gi|16716425|ref|NP_444356.1| protocadherin beta 1 precursor [Mus musculus]
gi|13876278|gb|AAK26059.1| protocadherin beta 1 [Mus musculus]
gi|124297699|gb|AAI32113.1| Protocadherin beta 1 [Mus musculus]
gi|124375642|gb|AAI32297.1| Protocadherin beta 1 [Mus musculus]
Length = 818
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 74/173 (42%), Gaps = 37/173 (21%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP------------- 75
LG A D D G GL Y L A +YF+L GP
Sbjct: 148 LGSRFPLQSAQDLDVGLNGLQNYTL-----SANTYFHLHTRFRSHGPKYAELVLDNPLDR 202
Query: 76 -IQDEGGLSSTA----------TVNIRVT--DINDKNPEFQSLPYEFSVPEGQD-GLAVG 121
Q E L+ TA T NIRV D+ND P+F L Y VPE D G V
Sbjct: 203 EAQPEVNLTITAVDGGSPPKSGTANIRVVVLDVNDHVPQFSRLVYRAQVPENSDNGSLVV 262
Query: 122 RVHATDADEGQNAVVYYSV---PEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
V ATD DEG N + YS+ PE + F+VD TG++R LD+E + Y
Sbjct: 263 VVTATDLDEGTNKQITYSLAENPEAVLRTFLVDPQTGEVRLRGPLDFEMIETY 315
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 71/141 (50%), Gaps = 17/141 (12%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDI 95
VK T ++S + LV R LD D +SY N+ GP LS+ + + + D+
Sbjct: 394 VKHTFRNS--YSLVTDRSLDRE-DVSSY-NITLVAMDTGP----PNLSTETVIEVVIADV 445
Query: 96 NDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV--PE--DIPFV--- 147
ND +P FQ Y +V E + +G+VHA D D G+NA V YS+ P+ D+
Sbjct: 446 NDNSPVFQEDSYVLTVRENNSPAVFIGKVHAEDLDLGENAQVTYSLLPPKSGDLSVFAYI 505
Query: 148 -VDANTGDIRTNKALDYEKQQ 167
++++ G + + +DYE Q
Sbjct: 506 SINSDNGKLYALRTMDYEAIQ 526
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 74/176 (42%), Gaps = 25/176 (14%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---EHQ 73
L Y A + + G ++ V ATD D G + Y L +N F +DP T +
Sbjct: 245 LVYRAQVPENSDNGSLVVVVTATDLDEGTNKQITYSLAENPEAVLRTFLVDPQTGEVRLR 304
Query: 74 GPI--------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG---QD 116
GP+ D GGLS+ + V + V D+ND PE +PE Q
Sbjct: 305 GPLDFEMIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVTISSVSSPLPEDSALQT 364
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPEDIPFVVD---ANTGDIRTNKALDYEKQQLY 169
+A+ + D G + + ED+PFVV N+ + T+++LD E Y
Sbjct: 365 VVALFTIRDRDVRVGGKITCF--LKEDLPFVVKHTFRNSYSLVTDRSLDREDVSSY 418
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 76/190 (40%), Gaps = 33/190 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP--- 75
Y R+ + V + +V A D D G+ V Y LL + S F G
Sbjct: 457 YVLTVRENNSPAVFIGKVHAEDLDLGENAQVTYSLLPPKSGDLSVFAYISINSDNGKLYA 516
Query: 76 --------IQD--------EGG---LSSTATVNIRVTDINDKNP------EFQSLPYEFS 110
IQD +GG LSS TV + V D ND P + +LP
Sbjct: 517 LRTMDYEAIQDFQFVVKATDGGFLSLSSEVTVRVVVLDDNDNRPMILYPLQNGTLPCNDL 576
Query: 111 VPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQ 166
VP + G V +V A D D GQN+ + Y + + F V G+IRT + + E+
Sbjct: 577 VPRSAEAGYLVTKVVAVDGDSGQNSWLSYHLLKATDLGLFSVQRQNGEIRTLRQIS-ERD 635
Query: 167 QLYLERVFLI 176
+ + V L+
Sbjct: 636 PMMQKLVILV 645
>gi|440902794|gb|ELR53536.1| Cadherin-18, partial [Bos grunniens mutus]
Length = 577
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 53/98 (54%), Gaps = 8/98 (8%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYY 138
GGLS + TVNI +TD+ND P F Y+ VPE Q G AVG++ A DAD G NA + Y
Sbjct: 33 GGLSGSTTVNITLTDVNDNPPRFPQKHYQLYVPESAQVGSAVGKIKANDADTGSNADMTY 92
Query: 139 SVPE-------DIPFVVDANTGDIRTNKALDYEKQQLY 169
S+ I + G + K L+YEK++ Y
Sbjct: 93 SIINGDGVGIFSISTDKETREGILSLKKPLNYEKKKSY 130
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 51/109 (46%), Gaps = 11/109 (10%)
Query: 65 NLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRV 123
+LD H GP +D + I V D+ D+ P F Y V E + G VG V
Sbjct: 140 HLDFRFSHLGPFKD------ATMLKIIVGDV-DEPPLFSMPSYVMEVYENAKIGTVVGTV 192
Query: 124 HATDADEGQNAVVY---YSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A D D + V Y Y+ +D F +DANTG I+T K LD E+ Y
Sbjct: 193 LAQDPDSANSLVRYFIDYNAEDDRFFNIDANTGTIKTTKVLDREETPWY 241
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 53/127 (41%), Gaps = 23/127 (18%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPI- 76
++G + V A D DS LV Y +D N + +FN+D T + P
Sbjct: 184 KIGTVVGTVLAQDPDSAN-SLVRY-FIDYNAEDDRFFNIDANTGTIKTTKVLDREETPWY 241
Query: 77 --------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
D L S TV IRV D+ND PE + Y+ V E + G + + ATD
Sbjct: 242 NITVAASENDNPSLLSHVTVGIRVLDVNDNPPEL-AREYDIVVCENSKPGQVIHTISATD 300
Query: 128 ADEGQNA 134
D+ N
Sbjct: 301 KDDFANG 307
>gi|195437460|ref|XP_002066658.1| GK24450 [Drosophila willistoni]
gi|194162743|gb|EDW77644.1| GK24450 [Drosophila willistoni]
Length = 5118
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 85/170 (50%), Gaps = 18/170 (10%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDN------------NTDAASYFNLDPATEH-QG 74
ELG +++V ++D D G Y +N N A + + + E+
Sbjct: 2908 ELGSFVIRVTSSDLDLGANANASYTFSENPGNKFKIEPQSGNITVAGHLDREQQDEYILK 2967
Query: 75 PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD-EGQ 132
+ +G + + I + D ND PEF+ Y FS PE Q +A VG++ ATD D +G
Sbjct: 2968 VVASDGAWRAETPITITIQDQNDNAPEFEHSFYSFSFPELQHAVAFVGQIIATDRDKQGP 3027
Query: 133 NAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLERVFLISKFAT 181
N+V+ YS+ + P F +D TG+I + K ++Y++ + E ++ ++ AT
Sbjct: 3028 NSVISYSLQQPSPMFSIDPGTGEIFSKKRIEYKRS--HEENIYALTILAT 3075
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 78/172 (45%), Gaps = 34/172 (19%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--------FNLDPATEHQGPI---- 76
+ +M VKA D D G+ G ++Y L NTD A+ F+L+P +
Sbjct: 2170 INTVVMAVKAVDYDEGRNGYIDYSL---NTDQANADSNDNDLPFSLNPTDGLLRVVNALD 2226
Query: 77 -------------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAV 120
QD G S+T + IR+ D ND +P F Y SV E G V
Sbjct: 2227 RELCSSYVLNITAQDRGEPPQSTTTRLLIRILDENDNSPVFDPKQYSASVAENASIGAMV 2286
Query: 121 GRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
+V ATD DEG N + YS+ ++ F + +TG +R K L+YE++ Y
Sbjct: 2287 LQVSATDVDEGANGRIRYSILTGDQNHDFSIGEDTGVVRVAKNLNYERKARY 2338
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 75/163 (46%), Gaps = 25/163 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EH 72
E+G T+ ++A D D+ G + + L+ + F L+P T ++
Sbjct: 1818 EIGHTIATIRAQDPDT--LGSITFSLVSGHNGK---FLLEPTTGNLILNDTLDRETKSKY 1872
Query: 73 QGPIQDEGGLSSTAT-VNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADE 130
I+ G+ T T + I V D ND P F Y F +PE G VG+V ATD D
Sbjct: 1873 DVRIRVSDGVQYTETNIIIEVNDTNDNPPMFDETVYSFDIPENAPKGFQVGQVVATDNDL 1932
Query: 131 GQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYL 170
GQN +V Y+V D F ++ TG + LDYE+ Q Y+
Sbjct: 1933 GQNGLVSYTVVSDWANDVFSLNPQTGMLTLTARLDYEEVQHYI 1975
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 70/164 (42%), Gaps = 26/164 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE---------------HQG 74
G ++ + D D G G V Y L N +FNLD AT H
Sbjct: 1279 GTHIIHIFTQDADEGLNGDVYYSLFSGN--EGGHFNLDSATGQLSLARHLDRESQDLHVL 1336
Query: 75 PIQDEGG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
I LSS T+ I V D ND PEF E SVPE G + R A+DA
Sbjct: 1337 TIVARDAALVQPLSSNTTITIVVLDENDNAPEFTQSSSEVSVPETSPIGTELMRFRASDA 1396
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
D+G N+ V +S+ F +D+ +G + +K+LDYE Y
Sbjct: 1397 DQGLNSQVVFSITAGNRRDTFHIDSISGSLYLHKSLDYEDITRY 1440
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 77/163 (47%), Gaps = 26/163 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------EHQGPI- 76
G + QV ATD D G+ GLV Y ++ + A F+L+P T E Q I
Sbjct: 1919 GFQVGQVVATDNDLGQNGLVSYTVVSDW--ANDVFSLNPQTGMLTLTARLDYEEVQHYIL 1976
Query: 77 ----QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
QD G LS+T TV V D+ND P F + Y + E G+ V V A D D
Sbjct: 1977 LVQAQDNGQPSLSNTITVYCNVLDLNDNAPIFDPMSYSSEIFENVPIGMEVVTVSAKDID 2036
Query: 130 EGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
G N ++ Y++ + F + +N G IRT + LD E++ Y
Sbjct: 2037 SGNNGLIEYTITAGDDKNEFDISSN-GTIRTRRQLDREQRGSY 2078
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV---PED 143
V + +TD+ND PEF PY ++ EG +G + + DADEG N VYYS+ E
Sbjct: 1249 VKVIITDVNDNAPEFLRGPYHVTLSEGSPEGTHIIHIFTQDADEGLNGDVYYSLFSGNEG 1308
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLYL 170
F +D+ TG + + LD E Q L++
Sbjct: 1309 GHFNLDSATGQLSLARHLDRESQDLHV 1335
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 80/170 (47%), Gaps = 22/170 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD--------------AASY 63
++ +A +K G + Q ATDKDS K +++Y L + TD +A+
Sbjct: 3320 YHSYIAENK-PTGTFVFQAHATDKDSPKNAIIQYAFLPSGTDRHFFSVNSTTGIISSAAI 3378
Query: 64 FNLDPATEHQGPIQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
F+ + + ++ + + S AT+ I + +N+ P F + F V E G +
Sbjct: 3379 FDYEERRTYTLQLKAKNPDSTMESYATLYIHILGVNEFYPHFLQPVFHFDVSETSPIGSS 3438
Query: 120 VGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQ 166
VG V ATD D G++ VYY + D F ++ NTG + ++ LD E Q
Sbjct: 3439 VGAVQATDKDMGEDGRVYYLLVGSSNDKGFGINTNTGVLFVSRHLDRETQ 3488
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 76/177 (42%), Gaps = 26/177 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL--DNNTD-----------AASYFN 65
Y A + +G ++QV ATD D G G + Y +L D N D A N
Sbjct: 2272 YSASVAENASIGAMVLQVSATDVDEGANGRIRYSILTGDQNHDFSIGEDTGVVRVAKNLN 2331
Query: 66 LDPATEHQGPIQD-----EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ---DG 117
+ + ++ E S A + I + DIND P F PY V E +G
Sbjct: 2332 YERKARYTLTVRAEDCAIENSASDVAELTISILDINDNRPTFLDSPYLARVMENTVPPNG 2391
Query: 118 LAVGRVHATDADEGQ-NAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
V V A DAD N+ V Y + E D+ F ++A+TG+I K LD E Q Y+
Sbjct: 2392 GYVLTVKAYDADTPPLNSQVRYFLKEGNSDL-FRINASTGEISLLKPLDRESQSEYI 2447
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 77/165 (46%), Gaps = 22/165 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDA-----ASYFNL 66
Y A + +G ++Q KATDKD G + + LL NTD A+ +
Sbjct: 2485 YHASIEENLPVGTVVLQPKATDKDEGLNAKLRFNLLGEHMTRFHINTDTGEITTAALLDR 2544
Query: 67 DPATEHQGPI--QDEGGLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPE--GQDGLA 119
+ ++ + QD AT + I+V D+ND P+F S Y+ +VP+ G D
Sbjct: 2545 EETDTYRLTLMAQDSSITEPRATSVNLTIKVVDVNDNVPQFDSSNYKIAVPDKMGPDRFV 2604
Query: 120 VGRVHATDADEGQNAVVYYSVP--EDIPFVVDANTGDIRTNKALD 162
G A D DEG NA V Y + ++ F+V+ TG I+T L+
Sbjct: 2605 FG-AKALDLDEGVNARVQYKLKGQDEQYFIVNEKTGVIKTKMQLE 2648
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 20/179 (11%)
Query: 14 SDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNL 66
++ L Y ++ ++ +KA+D+DSG G + YRL ++ N D+ +
Sbjct: 2791 TEKLIYNVEVLEEESPPQMIVVIKASDRDSGDNGEISYRLKNDYEGTFEINEDSGEIYTT 2850
Query: 67 ---------DPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD- 116
D A + Q L+ TA+V I + D ND P+F L + +V E +
Sbjct: 2851 MRLDREELADYALVVEAVDQGVPQLTGTASVMIHLLDKNDNPPKFTRL-FSLNVTENAEL 2909
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERV 173
G V RV ++D D G NA Y+ E+ F ++ +G+I LD E+Q Y+ +V
Sbjct: 2910 GSFVIRVTSSDLDLGANANASYTFSENPGNKFKIEPQSGNITVAGHLDREQQDEYILKV 2968
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 22/173 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN---------------TDAASY 63
Y + + +G T++ V ATD D G G++ + + N A
Sbjct: 3215 YQVIVPENVPIGSTIITVVATDPDLGPNGILRFGISGGNERQDFSVNEQTGAIIIQHALD 3274
Query: 64 FNLDPATEHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAV 120
++L ++D G L+ TA + I +TD+ND P F Y + E + G V
Sbjct: 3275 YDLIQEYHLNITVRDLGFKSLTDTAILTIILTDVNDNPPVFNQTEYHSYIAENKPTGTFV 3334
Query: 121 GRVHATDADEGQNAVVYYS-VPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ HATD D +NA++ Y+ +P F V++ TG I + DYE+++ Y
Sbjct: 3335 FQAHATDKDSPKNAIIQYAFLPSGTDRHFFSVNSTTGIISSAAIFDYEERRTY 3387
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 28/152 (18%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAA--------------------SYFNLDPATEHQG- 74
+ A+D D G+ + Y +++ N D Y+ L A E G
Sbjct: 1059 LAASDSDVGENARISYSIIEGNGDKVFGIFPDGYLFVRSPLDREERDYYALTVACEDAGY 1118
Query: 75 PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG-LAVGRVHATDADEGQN 133
P + SS V I V D ND P+F + + FS+PE VG++ A D D G+N
Sbjct: 1119 PSR-----SSQVPVVIHVLDENDNAPQFTNSTFTFSIPENAPADTFVGKLTAVDKDIGRN 1173
Query: 134 A-VVYYSVPEDIPFVVDANTGDIRTNKALDYE 164
A + +Y + F +D G I+T ++ D E
Sbjct: 1174 AELSFYLATQTQDFTIDTRNGFIKTLRSFDRE 1205
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 77/187 (41%), Gaps = 40/187 (21%)
Query: 30 GVTLMQVKATDKDSGKFGLV-EYRLLDNNTD----------------------------- 59
G L+ ATD D+G+ G+ +Y ++D N D
Sbjct: 182 GTRLLLDAATDADTGENGVTDQYEIVDGNVDHKFRLVTTTNPSGDTSYLHLETTGNLDRE 241
Query: 60 AASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGL 118
+ Y+NL+ + G G L VN+ + D+ND P F Y ++ E Q G
Sbjct: 242 SRGYYNLNISARDGGSPPRMGYLQ----VNVTILDVNDNPPIFDHSDYSVNLNETVQPGT 297
Query: 119 AVGRVHATDADEGQNA-VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQ----LYLERV 173
V V A+D+D G N + YY + F VD TG I T + L+ + L +++
Sbjct: 298 PVLTVMASDSDMGDNGKLTYYLAETEHQFTVDPETGVISTTEHLNCPRTSQTSGLKIQKS 357
Query: 174 FLISKFA 180
+ + FA
Sbjct: 358 CVFTVFA 364
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 71/169 (42%), Gaps = 34/169 (20%)
Query: 30 GVTLMQVKATD--KDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ---------- 77
G +++V ATD KDSG ++Y L+ N A YF ++ +H G I
Sbjct: 3118 GQRIVRVHATDNKKDSGSNNEIDYALVSANQSA--YFGIN---KHDGWITLAKPLLDVLP 3172
Query: 78 -----------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRV 123
D G S V I VT N PEF + Y+ VPE G + V
Sbjct: 3173 NSRFELTVKAIDRGVPPKSDQTRVVIIVTGENRHTPEFSARRYQVIVPENVPIGSTIITV 3232
Query: 124 HATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
ATD D G N ++ + + E F V+ TG I ALDY+ Q Y
Sbjct: 3233 VATDPDLGPNGILRFGISGGNERQDFSVNEQTGAIIIQHALDYDLIQEY 3281
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 70/156 (44%), Gaps = 40/156 (25%)
Query: 32 TLMQVKATDKDSGKFGLVEYRL--------------------------LDNNTDAASYFN 65
TLM ATD D G G V Y+L LD T A+Y
Sbjct: 631 TLM---ATDHDQGTNGSVSYQLAPNMERLYPQQFAIDSITGQLTTRHTLDRET-MANYEI 686
Query: 66 LDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD---GLAVGR 122
L A + PI S+TATV + V DIND +PEF Y +++ G D G ++
Sbjct: 687 LVIARDQGAPIPQ----SATATVYLSVADINDNSPEFYPKHYIYTLSSGSDSERGKSLLN 742
Query: 123 VHATDADEGQNAVVYY--SVPEDIPFVVDANTGDIR 156
V ATD D + ++ Y S E + F VDA+TG ++
Sbjct: 743 VTATDLDNDKESIAYTLESGGEGL-FHVDASTGSVQ 777
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 79 EGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNA 134
+GG+ S+TA + I V D+ND P F+ Y + E G V + ATD D G NA
Sbjct: 478 DGGIPARSATAHLIIDVNDVNDHEPVFEKSEYTAVLSELAPKGSFVASIAATDEDTGVNA 537
Query: 135 VVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQ 166
++Y + E F +D+ TG I T++ LD E Q
Sbjct: 538 QIHYEILSGNELKWFTMDSATGLIVTSEPLDREVQ 572
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 11/103 (10%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRV----HATDADEGQNAVVY 137
L+ + V + V DIND P F+ Y S+ E L VG V ATD DEG NA +
Sbjct: 2460 LTGSGIVRVEVQDINDNGPVFELNSYHASIEE---NLPVGTVVLQPKATDKDEGLNAKLR 2516
Query: 138 YSVPED--IPFVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
+++ + F ++ +TG+I T LD E+ Y R+ L+++
Sbjct: 2517 FNLLGEHMTRFHINTDTGEITTAALLDREETDTY--RLTLMAQ 2557
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN-----------LDPATEHQ---- 73
+G ++ V+ATDKD G+ G V Y L+ ++ D N LD T+++
Sbjct: 3435 IGSSVGAVQATDKDMGEDGRVYYLLVGSSNDKGFGINTNTGVLFVSRHLDRETQNRVVLT 3494
Query: 74 ------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
G I+ G + A +NI + D ND PEF Y S+ E G V V A
Sbjct: 3495 VIAKNYGSIR--GNDTDEAQINISIQDGNDP-PEFIKRFYTASISEATPIGSKVTTVKAI 3551
Query: 127 DAD-EGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D D QN YS+ + F +DA++G+I+T LD E Y
Sbjct: 3552 DKDVRLQNNQFSYSIINGNLNQSFRIDAHSGEIKTAALLDRESIAHY 3598
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 49/105 (46%), Gaps = 12/105 (11%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAV 135
Q + LSST V I + D+ND+ P F S E SV E V V A D DEG+N
Sbjct: 2131 QKQQRLSSTVQVTILIKDVNDEAPVFVS-ANETSVMENVSINTVVMAVKAVDYDEGRNGY 2189
Query: 136 VYYSV----------PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ YS+ D+PF ++ G +R ALD E Y+
Sbjct: 2190 IDYSLNTDQANADSNDNDLPFSLNPTDGLLRVVNALDRELCSSYV 2234
Score = 42.4 bits (98), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Query: 80 GGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVV 136
GG TA ++VT D ND PEF +P+ F+V E + G + + A D D +
Sbjct: 1780 GGQPRTAHTKVKVTILDKNDSPPEFLDMPFAFNVSEDLEIGHTIATIRAQDPDTLGSITF 1839
Query: 137 YYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ F+++ TG++ N LD E + Y R+
Sbjct: 1840 SLVSGHNGKFLLEPTTGNLILNDTLDRETKSKYDVRI 1876
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 80/189 (42%), Gaps = 35/189 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------E 71
Y A+ + G + + ATD+D+G + Y +L N +F +D AT
Sbjct: 509 YTAVLSELAPKGSFVASIAATDEDTGVNAQIHYEILSGN--ELKWFTMDSATGLIVTSEP 566
Query: 72 HQGPIQDEGGLSSTA------------TVNIRVTDINDKNPEFQSLPY-EFSVPEGQDG- 117
+QD LS +A + + + D ND+ P+F P+ + +V +D
Sbjct: 567 LDREVQDSVELSISARDGGPNPKYAYTQLKVTILDENDEAPQFG--PHQQINVTLSEDAP 624
Query: 118 --LAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
+ + ATD D+G N V Y + ++ F +D+ TG + T LD E Y
Sbjct: 625 PQSVITTLMATDHDQGTNGSVSYQLAPNMERLYPQQFAIDSITGQLTTRHTLDRETMANY 684
Query: 170 LERVFLISK 178
+ +I++
Sbjct: 685 --EILVIAR 691
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 27/128 (21%)
Query: 37 KATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDE-------------GG-- 81
+ D+D+G + Y L N + ++ Q PI+ E GG
Sbjct: 956 RVRDRDTGNNNRITYNLTHNPNELFRISSVTGVLYLQRPIRSEPNSILSVELMATDGGSP 1015
Query: 82 -LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD------GLAVGRVHATDADEGQNA 134
L +++I + D+ND P F YE S+ E GLA A+D+D G+NA
Sbjct: 1016 PLFGKLSLSIAIVDVNDHTPVFDHTSYETSLLESTKVNARFFGLA-----ASDSDVGENA 1070
Query: 135 VVYYSVPE 142
+ YS+ E
Sbjct: 1071 RISYSIIE 1078
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 71/177 (40%), Gaps = 35/177 (19%)
Query: 19 YGAMARDKHEL------GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-- 70
Y MA+ + L G + +V AT S K G + Y + N A N+DP +
Sbjct: 2686 YSYMAKTQFTLSEDVPPGKMIAKVSAT---SPKKGAMRYAIAGGNLGNA--VNVDPTSGA 2740
Query: 71 ------------EHQGPIQDEGG-------LSSTATVNIRVTDINDKNPEFQSLPYEFSV 111
HQ I E L S ++ I V+D ND P + L Y V
Sbjct: 2741 LTVGKDGLDYELAHQYEIWVEASDSDIKPSLRSVMSLTINVSDANDNPPITEKLIYNVEV 2800
Query: 112 PEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEK 165
E + + + A+D D G N + Y + D F ++ ++G+I T LD E+
Sbjct: 2801 LEEESPPQMIVVIKASDRDSGDNGEISYRLKNDYEGTFEINEDSGEIYTTMRLDREE 2857
>gi|397504069|ref|XP_003822631.1| PREDICTED: protocadherin-23-like [Pan paniscus]
Length = 2770
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 89/184 (48%), Gaps = 31/184 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPA-------- 69
F A ++ +G + + A D D G+ G V Y +L N + F LD +
Sbjct: 1022 FPIAHVKEDVTVGSLVHHITAHDPDEGRNGKVTYSILSGNENMT--FMLDESSGLLTTTC 1079
Query: 70 -------TEHQGPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
T+H + D+G LSS+ T+ + V D+ND+ P F+ YE SV E Q+ G
Sbjct: 1080 PLDYEMKTQHILTVLALDDGTPALSSSQTLTVTVLDVNDEAPVFKQHLYEASVKENQNPG 1139
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLE 171
V RV A D D G N+ + + + +P F ++++TG++ T LD E Q+++
Sbjct: 1140 EFVTRVEALDRDSGVNSKLQFEI---MPGASFESFKINSDTGEVVTTTILDREIQEVFTL 1196
Query: 172 RVFL 175
RV +
Sbjct: 1197 RVLV 1200
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 29/180 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP------- 68
+L+Y + R+ E+G ++ + A DKD G G EY L D +A+ F +DP
Sbjct: 1334 TLYYQSSVREDAEVGTVVLVLSAVDKDEGLNGQTEYFLTD---EASGAFTIDPMSGTLKT 1390
Query: 69 ---------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYE-FSVP 112
A IQ G S+T + + VTD+ND +P + P++ F P
Sbjct: 1391 SNTLDREARSQHTFSAVARDCSIQ--GSRSTTVIIKVYVTDVNDNDPVLEQNPFDVFLFP 1448
Query: 113 EGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLE 171
+ V A D D G N V +S E F +D TG+I+ + E ++L+
Sbjct: 1449 QSPTNQTTVIVRADDLDLGPNGTVVFSFAETQSMFSIDKYTGEIQFQQNPSSEYFPIWLQ 1508
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 57/115 (49%), Gaps = 16/115 (13%)
Query: 71 EHQGPIQ------DEGGLSSTAT--VNIRVTDINDKNPEF-QSLP---YEFSVPEGQD-G 117
EH+G Q D G AT V + VTDIND P F Q LP V EGQ
Sbjct: 654 EHRGHHQMTVLVTDRGSPPRNATMAVYVSVTDINDNRPFFPQCLPGKELHVKVLEGQPVN 713
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ V V A D DEG NA V YSV + F +DAN+G+IRT L Y+ + Y
Sbjct: 714 MLVTTVFAKDPDEGNNAEVTYSVSSEDSSDHFKIDANSGEIRTTTILSYDYRPSY 768
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 81/174 (46%), Gaps = 27/174 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA-------------SYFN 65
Y A + ++QV ATD DSG GL+EY +L N + A + +
Sbjct: 1646 YQASVSESQLYNAHVIQVFATDLDSGLNGLIEYSILSGNQEEAFQIDALSGVITTKAILD 1705
Query: 66 LDPATEHQGPIQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD---GL 118
+ + + +Q D+G LS+T + ++VTDIND P F LP E +V +D G+
Sbjct: 1706 YELTSSYSLIVQATDKGMPRLSNTTVIKVQVTDINDNAPAF--LPSE-AVEITEDSLPGV 1762
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
V V D D +A ++ E P F +D NTG + K LD+E+ Y
Sbjct: 1763 IVTHVSVHDVDL-NSAFIFSFAKESNPGTKFAIDQNTGVVVLVKTLDFEEMTEY 1815
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 20/168 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ 77
Y A ++ G + +V+A D+DSG +++ ++ + + N D I
Sbjct: 1127 LYEASVKENQNPGEFVTRVEALDRDSGVNSKLQFEIMPGASFESFKINSDTGEVVTTTIL 1186
Query: 78 D--------------EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
D +GG LSST T+ V D ND PEF Y+ V E Q+ V
Sbjct: 1187 DREIQEVFTLRVLVRDGGFPSLSSTTTILCTVEDENDHAPEFIVSSYDIEVLENQEPEVV 1246
Query: 121 GRVHATDADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEK 165
V A+D D G N V Y + + D F ++ +G++ T +ALD E+
Sbjct: 1247 YTVLASDMDAGNNRAVEYHIIDGNTDECFAINEMSGELSTTRALDREQ 1294
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 25/178 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--TDAASY----FNLDPATE- 71
+ + + + T+ + A D D+G +G + Y ++ T SY F +DP T
Sbjct: 2173 FSCIVPENLPISSTICSINALDFDAGPYGELTYSIVSPCFLTHGMSYDHDLFLIDPLTGD 2232
Query: 72 -HQGPI---------------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-G 114
H I +D+G +++ V + + I++ P F Y F++PE
Sbjct: 2233 IHAKQILDYENGNKYCLTVQAKDKGDATASLVVWVDIEGIDEFEPIFTQDQYFFTLPEKN 2292
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSVPEDIPFV-VDANTGDIRTNKALDYEKQQLYLE 171
+D +GRV A+DAD G + V+ YS+ PF V+ G+I +AL K QL E
Sbjct: 2293 KDRQLIGRVEASDADAGIDGVILYSLGTSSPFFSVNKTNGNIYLIRALPLIKSQLNKE 2350
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 30/156 (19%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL------------- 82
V A+D D+G VEY ++D NTD N E G + L
Sbjct: 1249 VLASDMDAGNNRAVEYHIIDGNTDECFAIN-----EMSGELSTTRALDREQISNFTLAIL 1303
Query: 83 ---------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQ 132
SS + +RV D ND +P F +L Y+ SV E + G V + A D DEG
Sbjct: 1304 CSDLGDPPRSSVIHLQVRVLDANDHSPSFPTLYYQSSVREDAEVGTVVLVLSAVDKDEGL 1363
Query: 133 NAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQ 166
N Y + ++ F +D +G ++T+ LD E +
Sbjct: 1364 NGQTEYFLTDEASGAFTIDPMSGTLKTSNTLDREAR 1399
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
LSSTA ++I+V D+ND P F SL Y V E G + V A D D G +A + Y++
Sbjct: 2044 LSSTAVISIQVLDVNDNPPNFSSLSYHTHVKESTPLGSHITVVSANDRDTGSHAEIIYNI 2103
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEK 165
E F ++ NTG + K LDYE+
Sbjct: 2104 ISGNEKGHFYLEENTGVLYLIKPLDYEE 2131
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 87 TVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---PED 143
T I + D+ND NP F S P + G V + A D DEG+N V YS+ E+
Sbjct: 1004 TAQIVILDVNDHNPTFMSFPIAHVKEDVTVGSLVHHITAHDPDEGRNGKVTYSILSGNEN 1063
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
+ F++D ++G + T LDYE + ++ V +
Sbjct: 1064 MTFMLDESSGLLTTTCPLDYEMKTQHILTVLAL 1096
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNAVVY 137
+GGLS+ A V + + D+ND +P F Y S+ E Q G + V ATD D G V
Sbjct: 8 KGGLSAQAFVRVDLEDVNDNHPVFNPSTYVTSISDETQPGTEIINVLATDQDSGIYGTVA 67
Query: 138 YS-VPEDIP--FVVDANTG 153
Y +P D+ F +D+ TG
Sbjct: 68 YELIPGDLSSLFTIDSTTG 86
Score = 43.5 bits (101), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 70/183 (38%), Gaps = 30/183 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF----------- 64
SL Y ++ LG + V A D+D+G + Y ++ N Y
Sbjct: 2066 SLSYHTHVKESTPLGSHITVVSANDRDTGSHAEIIYNIISGNEKGHFYLEENTGVLYLIK 2125
Query: 65 --NLDPATEHQGPIQD---EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
+ + T+ +Q E S A V + V D ND P+F + VPE
Sbjct: 2126 PLDYEEMTKFTLTVQASDAEKKHFSFAVVFVNVLDDNDHAPQFMFSSFSCIVPENLPISS 2185
Query: 119 AVGRVHATDADEGQNAVVYYSV------------PEDIPFVVDANTGDIRTNKALDYEKQ 166
+ ++A D D G + YS+ D+ F++D TGDI + LDYE
Sbjct: 2186 TICSINALDFDAGPYGELTYSIVSPCFLTHGMSYDHDL-FLIDPLTGDIHAKQILDYENG 2244
Query: 167 QLY 169
Y
Sbjct: 2245 NKY 2247
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 84 STATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPE 142
S+ VNI V D+ND +P F E + + G A+ A D D G+N ++ YS+
Sbjct: 316 SSTEVNITVMDVNDNHPAFLRTSDEIRISQTTPPGTALYLARAEDRDSGRNGLIRYSIAS 375
Query: 143 DIP--FVVDANTGDIRTNKALDYEKQQ 167
P F +D G + N +L +Q+
Sbjct: 376 PQPGVFAIDRALGVLFLNGSLGAGEQR 402
Score = 35.8 bits (81), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 69/170 (40%), Gaps = 27/170 (15%)
Query: 3 PCPIPS-ALEMTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR--------- 52
P +PS A+E+T DSL GV + V D D + +
Sbjct: 1744 PAFLPSEAVEITEDSL-----------PGVIVTHVSVHDVDLNSAFIFSFAKESNPGTKF 1792
Query: 53 LLDNNTDAA---SYFNLDPATEHQGPIQDEGGLSST-ATVNIRVTDINDKNPEFQSLPYE 108
+D NT + + TE++ IQ + T + +RV D+ND P F Y+
Sbjct: 1793 AIDQNTGVVVLVKTLDFEEMTEYELLIQISDSVHHTEGALVVRVLDVNDNPPVFSQDFYQ 1852
Query: 109 FSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRT 157
+VPE G +V + ATD + +N + Y + F +D G I T
Sbjct: 1853 VTVPESIPVGYSVLTLSATDLESNEN-ISYRILSSSKEFSIDPKNGTIFT 1901
>gi|326927331|ref|XP_003209846.1| PREDICTED: neural-cadherin-like [Meleagris gallopavo]
Length = 2531
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 82/185 (44%), Gaps = 31/185 (16%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----- 70
S Y A + ++G ++QV ATD D G+ G + Y +L +++ + F LD T
Sbjct: 743 SSIYEASVTEGADIGTFVIQVSATDLDLGQNGEITYSMLHDHSGDYTCFRLDSQTGSIYT 802
Query: 71 ------EHQG----------------PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYE 108
E +G P + S TA V + +TD+ND P F YE
Sbjct: 803 TSVFDREKKGSYLLEVESVDGSESARPGKHGRPNSDTAYVRVFITDVNDNKPVFTQSVYE 862
Query: 109 FSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYE 164
+V E QD G V V+A D DEG NA + Y + V TG I + LDYE
Sbjct: 863 VNVDEDQDVGSTVITVNANDEDEGTNAKLRYQITAGNTGGVLGVQPETGAIFIAQPLDYE 922
Query: 165 KQQLY 169
+ ++Y
Sbjct: 923 ETKIY 927
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L++ T+ I VTD+ND P F S YE SV EG D G V +V ATD D GQN + YS+
Sbjct: 721 LAAFTTIYINVTDVNDNVPFFTSSIYEASVTEGADIGTFVIQVSATDLDLGQNGEITYSM 780
Query: 141 PED-----IPFVVDANTGDIRTNKALDYEKQQLYLERV 173
D F +D+ TG I T D EK+ YL V
Sbjct: 781 LHDHSGDYTCFRLDSQTGSIYTTSVFDREKKGSYLLEV 818
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 54/96 (56%), Gaps = 8/96 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPY---EFSVPEGQD-GLAVGRVHATDADEGQNAVVY 137
L+STA V +++ D+N+ P FQ Y SV E Q G AV +V ATDADEG N +V
Sbjct: 400 LTSTAQVIVKIDDVNNNKPVFQKCHYYREHASVLENQPLGTAVLQVEATDADEGANGIVK 459
Query: 138 YSVPED---IP-FVVDANTGDIRTNKALDYEKQQLY 169
Y + +P F + +TG + T + D EKQ+ Y
Sbjct: 460 YGLMHRDGVLPAFRIHPDTGVLTTVQVFDREKQREY 495
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 21/140 (15%)
Query: 21 AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI---- 76
A + LG ++QV+ATD D G G+V+Y L+ + F + P T +
Sbjct: 430 ASVLENQPLGTAVLQVEATDADEGANGIVKYGLMHRD-GVLPAFRIHPDTGVLTTVQVFD 488
Query: 77 ---QDEGGLSSTAT------------VNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAV 120
Q E ++ TAT +N+ + D ND +P F++ YE+ + E + G +
Sbjct: 489 REKQREYPVTVTATDQAAEPLIGMCQINVLILDQNDNDPRFENTRYEYFLREDTRVGTSF 548
Query: 121 GRVHATDADEGQNAVVYYSV 140
RV A D D NAV+ YS+
Sbjct: 549 LRVTAHDDDYSSNAVITYSI 568
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 40/176 (22%)
Query: 33 LMQVKATDKDSGKFGL---VEYRLLDN--NTDAASYFNLDPATEHQGPIQDEGGL----- 82
+M++ A D+D GL + Y + +N N + FN++P T G I+ GG+
Sbjct: 1086 VMEMSAVDRDDPNVGLNAVLTYTITENVKNELGSDMFNINPNT---GTIRVAGGVIDRER 1142
Query: 83 ----------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHA 125
+ T T I + D+ND P F ++ ++PE + RV A
Sbjct: 1143 TAIYFLTVEARDGGGLTGTGTATIWIADVNDHVPNFTKEMWQAAIPENSAINSEILRVSA 1202
Query: 126 TDADEGQNAVVYYSVPEDIP---FVVDAN----TGDIRTNKALDYEKQQLYLERVF 174
TDAD G+NA + +S+ P F ++ + IR K LD+EK ER F
Sbjct: 1203 TDADGGENAHLTFSIIRGDPDQKFYIENDKEWQCATIRLKKKLDFEKAH---ERQF 1255
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 15/141 (10%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDIND 97
+ D+ +G L + +D +D Y L A E++ SS A V + +TD+ND
Sbjct: 156 SIDQATGDISLTQS--VDYESDQHQYLLLVRAEENEQ-------FSSAAEVLVVITDVND 206
Query: 98 KNPEF-QSLPYEFSVPEG-QDGLAVGRVHATDADEGQNA-VVYYSVPEDIPFVVDANTGD 154
PEF QS+ + SVPE A+ +V ATD D +NA ++YY++ D + G
Sbjct: 207 CAPEFHQSIYSKASVPETVTTTTALLQVTATDCDSKENAEILYYTLSPDFSI---TSHGT 263
Query: 155 IRTNKALDYEKQQLYLERVFL 175
I + LDYE+ E + +
Sbjct: 264 IFPARELDYERPNHLYEFIIM 284
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 82/191 (42%), Gaps = 44/191 (23%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSG-KFGLVEYRLLDNNTDAASYFNLDPATEHQGPI 76
+YG++ + L V ++QV A D D+ G + Y L + AA F +D E+ G I
Sbjct: 963 YYGSIIEELDGLPVFVLQVMANDPDNNVDEGDLSYSL--HGHGAADIFTID---ENTGSI 1017
Query: 77 --------------------QDEGG--LSSTATVNIRVTDINDKNPEFQSLP-------Y 107
DEGG L+ A V I V DIND P F +P +
Sbjct: 1018 YAHKVLDREERALWRFVVLATDEGGEGLTGFADVIINVWDINDNAPMFTCMPDDCNGSVF 1077
Query: 108 EFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDIP-------FVVDANTGDIRT-NK 159
E S P + + V D + G NAV+ Y++ E++ F ++ NTG IR
Sbjct: 1078 ENS-PADTLVMEMSAVDRDDPNVGLNAVLTYTITENVKNELGSDMFNINPNTGTIRVAGG 1136
Query: 160 ALDYEKQQLYL 170
+D E+ +Y
Sbjct: 1137 VIDRERTAIYF 1147
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 72/171 (42%), Gaps = 20/171 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT--------DAASYFNLDPAT 70
Y + ++G T++ V A D+D G + Y++ NT + + F P
Sbjct: 861 YEVNVDEDQDVGSTVITVNANDEDEGTNAKLRYQITAGNTGGVLGVQPETGAIFIAQPLD 920
Query: 71 EHQGPIQD------EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVG--R 122
+ I + +G A I V + ND++P F Y S+ E DGL V +
Sbjct: 921 YEETKIYEIHLLASDGKWEDYAVTIINVMNKNDESPVFSINEYYGSIIEELDGLPVFVLQ 980
Query: 123 VHATD----ADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V A D DEG + + F +D NTG I +K LD E++ L+
Sbjct: 981 VMANDPDNNVDEGDLSYSLHGHGAADIFTIDENTGSIYAHKVLDREERALW 1031
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 71/164 (43%), Gaps = 29/164 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASY-----------------FNLDPATEHQGP 75
+++V ATD D G+ + + ++ + D Y + + A E Q
Sbjct: 1197 ILRVSATDADGGENAHLTFSIIRGDPDQKFYIENDKEWQCATIRLKKKLDFEKAHERQFN 1256
Query: 76 IQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD---GLAVGRVHATDAD 129
+ ++ SSTAT I V D ND +P F S + S P ++ G V V ATD D
Sbjct: 1257 LTIKVEDLDFSSTATCLIEVEDSNDHSPVFHSQLIQTS-PVFENMPVGTTVTTVRATDKD 1315
Query: 130 EGQNAVVYYSVPEDI----PFVVDANTGDIRTNKALDYEKQQLY 169
G N + YS+ D FV+D + I NK LD E Q Y
Sbjct: 1316 SGLNGNIIYSIKSDSDPMRQFVIDQHGHVIVANK-LDREVIQKY 1358
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 94 DINDKNPEFQSLPYEFSV---PEGQDGLAVGRVHATDADEGQNAVVYYSVPE--DIPFVV 148
D+ND PE+ P+ F P+ +G V ++ A DADEG N V Y + E + F V
Sbjct: 2 DVNDNVPEWAMKPFPFLAVVSPQATEGTEVYKLLAVDADEGINGTVEYFLLEGGEGRFQV 61
Query: 149 DANTGDIRTNKALDYEKQQLYLERVFLISKFAT 181
+ +TG I+T L + + YL V K +
Sbjct: 62 ERDTGWIKTT-GLPLVRNKEYLLTVLAADKLGS 93
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 66/146 (45%), Gaps = 30/146 (20%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE--HQGPI-----------QDE 79
L+QV ATD DS + + Y L + S+ + PA E ++ P + E
Sbjct: 231 LLQVTATDCDSKENAEILYYTLSPDFSITSHGTIFPARELDYERPNHLYEFIIMAVDKGE 290
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE--GQDGLAVGRVHATDADEGQNAVVY 137
+ TATV I V+++ND+ PEF Y V E G + L V V+A D D + V Y
Sbjct: 291 DPKTGTATVRIHVSNVNDEAPEFSQTIYRSFVSEDAGPNTL-VATVNAVDPD--GDGVTY 347
Query: 138 YSVPEDIP-------FVVDANTGDIR 156
DIP F+VD G +R
Sbjct: 348 -----DIPSGNQKGNFIVDPKKGLVR 368
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 41/177 (23%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------ 76
+G T+ V+ATDKDSG G + Y + +++D F +D +H I
Sbjct: 1302 VGTTVTTVRATDKDSGLNGNIIYS-IKSDSDPMRQFVID---QHGHVIVANKLDREVIQK 1357
Query: 77 -------QDEGGLSSTA--TVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR----- 122
D+G + T TV I + D+ND P F++ PY V E +
Sbjct: 1358 YSLIVQASDQGTPAETGSVTVLINLLDVNDNGPRFEA-PYMPIVWENMLSPEIVHMNHSS 1416
Query: 123 --VHATDADEGQNAVVY-YSVPED----IPFVVDANTGDIRTNKAL---DYEKQQLY 169
+HA D D +N + +S+P D + F + N D T AL D EKQ+++
Sbjct: 1417 KLLHAYDPDSKENGPPFTFSLPSDYQNSLDFSLTDNRDDTATVTALRSFDREKQKVF 1473
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 74/179 (41%), Gaps = 25/179 (13%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTD-------AASYFNLDPATE 71
Y R+ +G + ++V A D D ++ Y + + TD + F P ++
Sbjct: 534 YEYFLREDTRVGTSFLRVTAHDDDYSSNAVITYSIANGETDYLQINPTSGWIFVNQPISQ 593
Query: 72 HQGPIQD-----EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHA 125
I+D G SS + + VT ++ P+++ YE +PE A V R+ A
Sbjct: 594 RSSIIRDIIATDGGNRSSKVELVVTVTSAKNQPPQWERGSYEVVIPENTTRDASVLRIKA 653
Query: 126 TDADEGQNAVVYY----SVPED---IPFVVDANTGD----IRTNKALDYEKQQLYLERV 173
T + G V Y VPE + F + N D I + LDYE + +L RV
Sbjct: 654 T-SPLGDPRVTYNLEEGLVPETNMPVRFYLTPNRDDGSASILVAELLDYETTKNFLLRV 711
>gi|297477316|ref|XP_002689274.1| PREDICTED: protocadherin beta-6 [Bos taurus]
gi|358413160|ref|XP_001253387.2| PREDICTED: protocadherin beta-6 [Bos taurus]
gi|296485244|tpg|DAA27359.1| TPA: protocadherin beta 6 [Bos taurus]
Length = 797
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 77/172 (44%), Gaps = 21/172 (12%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY A + LG ++ V A D D+G FG V Y L + D F ++ T
Sbjct: 247 FYEAQVPENSSLGSLVITVSARDLDAGSFGEVSYALFQVD-DVNEPFEINANTGEIRLKK 305
Query: 71 --------EHQGPIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
+Q I+ D GGLS +V I+V D+ND P+ +PE + V
Sbjct: 306 KLDFEEFQSYQVDIEATDGGGLSGKCSVVIKVLDVNDNAPQLTMSSLTSPIPENLPEILV 365
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
+DAD G N V S+ +++PFV+ + + + T ALD E++ Y
Sbjct: 366 AVFSVSDADSGHNQQVICSIHDNLPFVLRPSVENFYTLVTEGALDREERAEY 417
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
LS T + I V D ND PEF YE VPE G V V A D D G V Y++
Sbjct: 223 LSGTTEIQILVLDSNDNAPEFAQEFYEAQVPENSSLGSLVITVSARDLDAGSFGEVSYAL 282
Query: 141 --PEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
+D+ PF ++ANTG+IR K LD+E+ Q Y
Sbjct: 283 FQVDDVNEPFEINANTGEIRLKKKLDFEEFQSY 315
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 74/187 (39%), Gaps = 35/187 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYR-------------LLDNNTDAASYFN 65
Y R+ + + + V ATD D+G V Y L+ N D F
Sbjct: 456 YTLWVRENNSPALHIGSVSATDTDAGANAQVTYSLLPPPDPLVPLASLVSINPDNGHLFA 515
Query: 66 LDP-------ATEHQGPIQDEG--GLSSTATVNIRVTDINDKNP------EFQSLPYEFS 110
L A E D G LSS A V + V D ND P + S P
Sbjct: 516 LTSLDYEALRAFEFHVGATDRGSPALSSQALVRVLVADANDNAPFVLYPLQNASAPCTEL 575
Query: 111 VPEGQD-GLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL---DY 163
VP + G V +V A D D GQNA + Y + E F V A+ G++RT + L D
Sbjct: 576 VPRAAEPGYLVTKVVAVDGDAGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDA 635
Query: 164 EKQQLYL 170
KQ+L +
Sbjct: 636 PKQRLVV 642
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS 139
L + + + V+D+ND P F Y V E L +G V ATD D G NA V YS
Sbjct: 431 LKTEHNITVLVSDVNDNAPAFSQTSYTLWVRENNSPALHIGSVSATDTDAGANAQVTYS 489
>gi|126290967|ref|XP_001377705.1| PREDICTED: protocadherin gamma-A2-like [Monodelphis domestica]
Length = 815
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 70/161 (43%), Gaps = 21/161 (13%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EH 72
G L+ V ATD D G V Y L+ + F L+ T E
Sbjct: 258 GTVLLIVNATDADEGINSQVRYFLVKIPGKNSEIFQLNSVTGELLTLQNLDYEDAEFHEM 317
Query: 73 QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEG 131
+ QD GL S A +++ V D+ND PE S+PE G + H D D G
Sbjct: 318 EVEAQDGLGLRSRAKIHVTVVDVNDNAPEVTITSVTSSIPENAPPGTIITLFHVHDRDSG 377
Query: 132 QNAVVYYSVPEDIPFVVDA---NTGDIRTNKALDYEKQQLY 169
+N V S+P+D+PF ++ N + T++ALD E+ Y
Sbjct: 378 KNGQVLCSIPDDLPFKLEKKVDNYHSLVTDRALDREQVSEY 418
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 84/190 (44%), Gaps = 38/190 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----DAASYFNLDPAT--- 70
Y A ++ + G ++ + A D DS + LV Y L+D+N +SY +++ T
Sbjct: 457 YSAYIQENNPRGASIYSLTAHDPDSQENALVTYSLVDSNLPLEAPPLSSYVSINSETGVL 516
Query: 71 --------EHQGPIQ------DEGG--LSSTATVNIRVTDINDKNPE--FQSLP------ 106
E +Q D G LSS ++ + + D ND PE + + P
Sbjct: 517 YALCSFDYEQSQELQLRVTARDSGDPPLSSNVSLTLFILDQNDNAPEILYPAFPTDGSSG 576
Query: 107 YEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL-- 161
E + + G V +V A DAD GQNA + Y + E F V ++G+IRT +A
Sbjct: 577 VELAPRSAEPGYLVTKVVAVDADSGQNAWLSYHLLKATEPRLFSVGLHSGEIRTVRAFLD 636
Query: 162 -DYEKQQLYL 170
D KQ L +
Sbjct: 637 KDALKQNLLV 646
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSVP 141
S TA + + V D ND P F Y +VPE G + V+ATDADEG N+ V Y +
Sbjct: 223 SGTARIRVTVLDANDNAPVFTQPIYTVNVPENVPQGTVLLIVNATDADEGINSQVRYFLV 282
Query: 142 EDIP------FVVDANTGDIRTNKALDYEKQQLY 169
+ IP F +++ TG++ T + LDYE + +
Sbjct: 283 K-IPGKNSEIFQLNSVTGELLTLQNLDYEDAEFH 315
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 71/171 (41%), Gaps = 30/171 (17%)
Query: 31 VTLMQVKATDKDSGKFGLVEYRL-------LDNNTDAASYFNLDPATEHQGPIQ------ 77
+TL V D+DSGK G V + L+ D D A + + +
Sbjct: 366 ITLFHVH--DRDSGKNGQVLCSIPDDLPFKLEKKVDNYHSLVTDRALDREQVSEYNITVT 423
Query: 78 --DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQ 132
D GG LS+ + + V DIND P F Y + E G ++ + A D D +
Sbjct: 424 AVDFGGPPLSTDTHIFLHVADINDNPPTFSQSAYSAYIQENNPRGASIYSLTAHDPDSQE 483
Query: 133 NAVVYYS-VPEDIPF---------VVDANTGDIRTNKALDYEKQQLYLERV 173
NA+V YS V ++P +++ TG + + DYE+ Q RV
Sbjct: 484 NALVTYSLVDSNLPLEAPPLSSYVSINSETGVLYALCSFDYEQSQELQLRV 534
>gi|354500183|ref|XP_003512180.1| PREDICTED: protocadherin beta-14-like [Cricetulus griseus]
Length = 709
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 20/172 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
Y + +G +++ + A D D G +G++ Y L + F+++P +
Sbjct: 246 LYEVQVPEDMPIGSSIIAISAKDLDLGNYGIISYSFLQASEGIRKTFDINPTSGEVNLRS 305
Query: 71 --------EHQGPIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
+ IQ D GGLS+ T+ ++V DIND PE ++PE V
Sbjct: 306 LLDFEVIQSYSVNIQATDGGGLSAKCTLLVKVLDINDNAPEVTISSITNTIPENASETLV 365
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVD---ANTGDIRTNKALDYEKQQLY 169
D D G N + S+ +D+PF++ N + + KALD E + Y
Sbjct: 366 ALFSVRDQDSGDNGRILCSIQDDLPFILKPTFKNFFTLLSEKALDRESKAEY 417
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS- 139
L++ T+ ++V+D+ND P F Y V E L +G + ATD+D G NA + YS
Sbjct: 431 LTTQHTITVQVSDVNDNAPAFTETSYTLFVQENNSPALHIGTISATDSDSGSNAHITYSL 490
Query: 140 VPEDIP-------FVVDANTGDIRTNKALDYEKQQLYLERV 173
+P P ++A+ G + +ALDYE Q + RV
Sbjct: 491 LPTHDPQLALSSLISINADNGQLFALRALDYEALQTFEFRV 531
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS-- 139
S T ++ I+V DIND PEF YE VPE G ++ + A D D G ++ YS
Sbjct: 223 SGTTSILIKVLDINDNAPEFAQSLYEVQVPEDMPIGSSIIAISAKDLDLGNYGIISYSFL 282
Query: 140 -VPEDIPFVVDAN--TGDIRTNKALDYEKQQLY 169
E I D N +G++ LD+E Q Y
Sbjct: 283 QASEGIRKTFDINPTSGEVNLRSLLDFEVIQSY 315
>gi|17352473|ref|NP_477497.1| fat [Drosophila melanogaster]
gi|13124727|sp|P33450.3|FAT_DROME RecName: Full=Cadherin-related tumor suppressor; AltName:
Full=Protein fat; Flags: Precursor
gi|7295732|gb|AAF51036.1| fat [Drosophila melanogaster]
Length = 5147
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 83/175 (47%), Gaps = 26/175 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + + +G T++ V ATD D+G G++ Y + N F++D T
Sbjct: 3234 YQVIVPENEPVGSTILTVGATDDDTGPNGMLRYSISGGN--ERQDFSVDERTGGIVIQQQ 3291
Query: 71 ---------EHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
+QD G LSS A + I +TD+ND P F Y +PE + G
Sbjct: 3292 LDYDLIQEYHLNITVQDLGYHPLSSVAMLTIILTDVNDNPPVFNHKEYHCYIPENKPVGT 3351
Query: 119 AVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V + HA D D +NA+++Y S P+ F+++ + G I + + DYE++++Y
Sbjct: 3352 FVFQAHAADKDSPKNAIIHYAFLPSGPDRHFFIMNQSNGTISSAVSFDYEERRIY 3406
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 80/163 (49%), Gaps = 25/163 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT---------------EH 72
++G T+ ++A D D+ G V + L+D + F L+P+T ++
Sbjct: 1837 QIGHTISTLRAHDPDT--LGSVTFLLMDGHD---GKFLLEPSTGKLILNDTLDRETKSKY 1891
Query: 73 QGPIQDEGGLSST-ATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE 130
+ I+ G+ T A I+V+D ND P F+ Y F +PE Q G VG++ A DAD
Sbjct: 1892 ELRIRVSDGVQYTEAYATIQVSDTNDNPPLFEDTVYSFDIPENAQRGYQVGQIVARDADL 1951
Query: 131 GQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYL 170
GQNA + Y V D F ++ TG + LDYE+ Q Y+
Sbjct: 1952 GQNAQLSYGVVSDWANDVFSLNPQTGMLTLTARLDYEEVQHYI 1994
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 84/172 (48%), Gaps = 18/172 (10%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDN------------NTDAASYFNLDPATEH-QG 74
E+G +++V ++D D G Y +N N A + + + E+
Sbjct: 2926 EIGSFVIRVTSSDLDLGANANASYSFSENPGEKFRIEPQSGNITVAGHLDREQQDEYILK 2985
Query: 75 PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD-EGQ 132
+ +G + + I + D ND PEF+ Y FS PE Q +A VG++ ATD D +G
Sbjct: 2986 VVASDGAWRAETPITITIQDQNDNAPEFEHSFYSFSFPELQQSIALVGQIIATDRDKQGP 3045
Query: 133 NAVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYL--ERVFLISKFAT 181
N+V+ YS+ + P F +D TG++ + KA+ ++ Q E ++ ++ AT
Sbjct: 3046 NSVISYSLQQPSPMFSIDPATGEVFSKKAVRFKHSQYVRSPENMYALTVLAT 3097
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV 140
L V + VTD+ND PEF PY ++ EG +G + V DADEG N VYYS+
Sbjct: 1258 LQDKVKVKVIVTDVNDNAPEFLRAPYHVTISEGASEGTHITHVFTQDADEGLNGDVYYSL 1317
Query: 141 P---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
E F +D+ TG + + LD E Q+++
Sbjct: 1318 AKGNEAGQFNLDSATGQLSLGRRLDRESQEIH 1349
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 68/159 (42%), Gaps = 26/159 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------------EHQ 73
G + V D D G G V Y L N A FNLD AT H
Sbjct: 1294 GTHITHVFTQDADEGLNGDVYYSLAKGN--EAGQFNLDSATGQLSLGRRLDRESQEIHHL 1351
Query: 74 GPIQDEGGL----SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDA 128
+ + L SS A++ I V D ND PEF E SV E G + R A+DA
Sbjct: 1352 IVVAKDAALKHPLSSNASITIVVLDENDNAPEFTQSSSEVSVLETSPTGTELMRFRASDA 1411
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYE 164
D+G N+ V +S+ F +D+ TG + +K LDYE
Sbjct: 1412 DQGVNSQVVFSISAGNRRDTFHIDSITGSLYLHKPLDYE 1450
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 30/170 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY-----FNLDPATEHQGPIQD----- 78
+ ++ VKA D D G+ G ++Y + + + F+L+P T+ Q + D
Sbjct: 2181 INTVVIAVKAVDNDEGRNGYIDYLMKEARDEDMGQSDPLPFSLNP-TDGQLRVVDALDRE 2239
Query: 79 ---------------EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR 122
E S+ + + IR+ D ND +P F Y SV E G V +
Sbjct: 2240 LRSSYLLNITARDRGEPPQSTESQLLIRILDENDNSPVFDPKQYSASVAENASIGAMVLQ 2299
Query: 123 VHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
V ATD DEG N + YS+ ++ F + +TG +R K L+YE+ Y
Sbjct: 2300 VSATDVDEGANGRIRYSIVLGDQNHDFSISEDTGVVRVAKNLNYERLSRY 2349
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 78/176 (44%), Gaps = 26/176 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL--DNNTD-----------AASYFN 65
Y A + +G ++QV ATD D G G + Y ++ D N D A N
Sbjct: 2283 YSASVAENASIGAMVLQVSATDVDEGANGRIRYSIVLGDQNHDFSISEDTGVVRVAKNLN 2342
Query: 66 LDPATEHQGPIQD-----EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ---DG 117
+ + + ++ E TA + I + DIND P F PY V E +G
Sbjct: 2343 YERLSRYSLTVRAEDCALENPAGDTAELTINILDINDNRPTFLDSPYLARVMENTVPPNG 2402
Query: 118 LAVGRVHATDADEGQ-NAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
V V+A DAD N+ V Y + E D+ F ++A++GDI K LD E+Q Y
Sbjct: 2403 GYVLTVNAYDADTPPLNSQVRYFLKEGDSDL-FRINASSGDIALLKPLDREQQSEY 2457
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 69/159 (43%), Gaps = 21/159 (13%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD--------------AASYFNLDPATEHQG 74
+G + Q A DKDS K ++ Y L + D +A F+ + +
Sbjct: 3349 VGTFVFQAHAADKDSPKNAIIHYAFLPSGPDRHFFIMNQSNGTISSAVSFDYEERRIYTL 3408
Query: 75 PIQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
I+ + + S A + + V +N+ P+F + F V E G VG V ATD D
Sbjct: 3409 QIKAKNPDSSMESYANLYVHVLGVNEFYPQFLQPVFHFDVSETSAVGTRVGAVQATDKDS 3468
Query: 131 GQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQ 166
G++ VYY + D F +D NTG I + LD E Q
Sbjct: 3469 GEDGRVYYLLVGSSNDKGFRIDTNTGLIYVARHLDRETQ 3507
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 73/165 (44%), Gaps = 26/165 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------------EHQGP 75
+ G + Q+ A D D G+ + Y ++ + A F+L+P T E Q
Sbjct: 1936 QRGYQVGQIVARDADLGQNAQLSYGVVSDW--ANDVFSLNPQTGMLTLTARLDYEEVQHY 1993
Query: 76 I-----QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
I QD G LS+T TV V D+ND P F + Y V E V V A D
Sbjct: 1994 ILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSYSSEVFENVPIATEVVTVSAKD 2053
Query: 128 ADEGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D G N ++ YS+ D F +D+N G IRT + LD E + Y
Sbjct: 2054 IDSGNNGLIEYSITAGDVDSEFGIDSN-GTIRTRRNLDREHRSTY 2097
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 79/179 (44%), Gaps = 32/179 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE---HQGP 75
Y A+ + G + + ATD+D+G V Y +L N +F++DP T GP
Sbjct: 499 YSAVLSELAPTGSFVASITATDEDTGVNAQVHYDILSGN--ELKWFSMDPLTGLIVTTGP 556
Query: 76 ----IQDEGGLSSTAT------------VNIRVTDINDKNPEFQSLPYEFSVPEGQDG-- 117
I+D LS +A + + + D ND+ P+F E +V G+D
Sbjct: 557 LDREIRDTVELSISARDGGPNPKFAYTQLKVIILDENDEAPQFSQ--REQNVTLGEDAPP 614
Query: 118 -LAVGRVHATDADEGQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLY 169
V + ATD D+G N V +++ + F +DA TG + T + LD EK Y
Sbjct: 615 QTIVALMTATDHDQGTNGSVTFALAPSVERLYPLQFALDALTGQLTTRRPLDREKMSQY 673
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 19/177 (10%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLD 67
+ L Y A ++ + VKA+D+DSG G V YRL ++ Y +
Sbjct: 2811 EQLIYNAEVLEEESPPQLIAVVKASDRDSGDNGNVIYRLQNDFDGTFEITESGEIYTRMR 2870
Query: 68 PATEHQGPIQ------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GL 118
E G D+G ++ TA+V + + D ND P+F L + +V E + G
Sbjct: 2871 LDREEIGDYAFVVEAVDQGVPHMTGTASVLLHLLDKNDNPPKFTRL-FSLNVTENAEIGS 2929
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERV 173
V RV ++D D G NA YS E+ F ++ +G+I LD E+Q Y+ +V
Sbjct: 2930 FVIRVTSSDLDLGANANASYSFSENPGEKFRIEPQSGNITVAGHLDREQQDEYILKV 2986
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 66/158 (41%), Gaps = 30/158 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y A R+ G ++ +ATDKD G + + LL + F++D T G I
Sbjct: 2496 YHATVRENLPSGTHVLTPRATDKDEGLNAKLRFNLLGEHM---HRFHIDSET---GEIST 2549
Query: 79 EGGL-----------------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG- 114
L +S+ + I V+D+ND P+F S Y +VPE
Sbjct: 2550 ATTLDREETSVYHLTLMAQDSSITEPRASSVNLTISVSDVNDNIPKFDSTTYNVAVPERI 2609
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANT 152
G V A D D+G+NAVV+Y++ D NT
Sbjct: 2610 SKGEFVFGARALDLDDGENAVVHYTISGRDQHYFDINT 2647
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV 140
L+ T V + V DIND +P F+ Y +V E G V ATD DEG NA + +++
Sbjct: 2471 LTGTGIVRVEVQDINDNDPVFELQSYHATVRENLPSGTHVLTPRATDKDEGLNAKLRFNL 2530
Query: 141 PED--IPFVVDANTGDIRTNKALDYEKQQLY 169
+ F +D+ TG+I T LD E+ +Y
Sbjct: 2531 LGEHMHRFHIDSETGEISTATTLDREETSVY 2561
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 26/159 (16%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAA--------------------SYFNLD 67
++ + ATD D G G + Y +++ NT+ Y+ L
Sbjct: 1063 KVNTRFFALAATDIDLGDNGRISYEIIEGNTERMFGVFPDGYLFVRAPLDREERDYYALT 1122
Query: 68 PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDG-LAVGRVHAT 126
+ G + SS V I V D ND P+F + + FS+PE VG++ A
Sbjct: 1123 VSCRDAG----QPSRSSVVPVVIHVIDENDNAPQFTNSTFTFSIPENAPADTFVGKLTAV 1178
Query: 127 DADEGQNAVVYYSVPEDIP-FVVDANTGDIRTNKALDYE 164
D D G+NA + +++ F +D G I+T + D E
Sbjct: 1179 DRDIGRNAELSFTLSSQTQDFTIDTRNGFIKTLRPFDRE 1217
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 12/109 (11%)
Query: 69 ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQS-----LPYEFSVPEGQDGLAVGRV 123
AT+ P E LS+ V + V DIND P F S LP +FS +G AV +V
Sbjct: 1570 ATDRAQP--SERQLSTEKLVTVIVEDINDNAPVFVSMNAAILPPKFSTSKGS-STAVMQV 1626
Query: 124 HATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
HA DAD N +V Y + P+++ F + NTG I ++++ Y
Sbjct: 1627 HAKDADSSSNGLVTYEIVSGPQEL-FKLQRNTGIITFTPGPQFKQEVRY 1674
Score = 42.4 bits (98), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVV 136
Q + LSST V I + D+ND+ P F S + V V A D DEG+N +
Sbjct: 2142 QKQQRLSSTVKVTILIKDVNDEVPVFISANETAIMENVAINTVVIAVKAVDNDEGRNGYI 2201
Query: 137 YYSVPE----------DIPFVVDANTGDIRTNKALDYEKQQLYL 170
Y + E +PF ++ G +R ALD E + YL
Sbjct: 2202 DYLMKEARDEDMGQSDPLPFSLNPTDGQLRVVDALDRELRSSYL 2245
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP---ED 143
V I VT N P F Y+ VPE + G + V ATD D G N ++ YS+ E
Sbjct: 3215 VVIVVTGENMDTPRFSVNSYQVIVPENEPVGSTILTVGATDDDTGPNGMLRYSISGGNER 3274
Query: 144 IPFVVDANTGDIRTNKALDYEKQQLY 169
F VD TG I + LDY+ Q Y
Sbjct: 3275 QDFSVDERTGGIVIQQQLDYDLIQEY 3300
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 71/167 (42%), Gaps = 29/167 (17%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF-----------NLDPATEHQ---- 73
+G + V+ATDKDSG+ G V Y L+ ++ D +LD T+++
Sbjct: 3454 VGTRVGAVQATDKDSGEDGRVYYLLVGSSNDKGFRIDTNTGLIYVARHLDRETQNRVVLT 3513
Query: 74 ------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHAT 126
G I+ G + A V I + D ND PEF Y ++ E G V V A
Sbjct: 3514 VMAKNYGSIR--GNDTDEAQVIISIQDGNDP-PEFIKHYYTSTISEAAPVGTKVTTVKAI 3570
Query: 127 DAD-EGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D D QN YS+ F +D TG+I T LD E+ Y
Sbjct: 3571 DKDVRTQNNQFSYSIINGNLKQSFKIDVQTGEISTASRLDREETSTY 3617
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 64/160 (40%), Gaps = 27/160 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------------EHQGP- 75
G + V D DSG G R++ N +F L+ A E G
Sbjct: 403 GTVVAAVAVKDSDSGLNGRTSVRIVSGN--ELGHFRLEEAADLHIVRVNGVLDREEIGKY 460
Query: 76 -----IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATD 127
D+G ++TA + I V D+ND P F+ Y + E G V + ATD
Sbjct: 461 NLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLSELAPTGSFVASITATD 520
Query: 128 ADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
D G NA V+Y + E F +D TG I T LD E
Sbjct: 521 EDTGVNAQVHYDILSGNELKWFSMDPLTGLIVTTGPLDRE 560
Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Query: 80 GGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVV 136
GG T+ +RVT D ND P+F P+ ++V E Q G + + A D D +
Sbjct: 1799 GGQPRTSRTKVRVTVLDKNDSPPQFLDTPFVYNVSEDLQIGHTISTLRAHDPDTLGSVTF 1858
Query: 137 YYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
D F+++ +TG + N LD E + Y R+
Sbjct: 1859 LLMDGHDGKFLLEPSTGKLILNDTLDRETKSKYELRI 1895
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 69/165 (41%), Gaps = 28/165 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLV-EYRLLDNNTDA-------------ASYFNLDPA----TE 71
G L+ ATD D G+ G+ +Y ++ N D SY +L+ E
Sbjct: 172 GTRLLLDAATDADVGENGVTDQYEIVAGNVDNKFRLVTTANPSGDTSYLHLETTGNLDRE 231
Query: 72 HQGPIQ-----DEGGLSST---ATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGR 122
+G Q +GG VN+ + D+ND P F Y S+ E G V
Sbjct: 232 SRGSYQLNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSDYNVSLNETALPGTPVVT 291
Query: 123 VHATDADEGQNA-VVYYSVPEDIPFVVDANTGDIRTNKALDYEKQ 166
V A+D D G N+ + YY + F V+ TG I T + ++ +Q
Sbjct: 292 VMASDNDLGDNSKITYYLAETEHQFTVNPETGVISTTERVNCPQQ 336
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 12/85 (14%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR----------VHATDADEGQ 132
S+TATV + V D+ND +P+F Y +S+ + D + + + V A+D D+G
Sbjct: 689 SATATVWLNVADVNDNDPQFYPRHYIYSLADDDDDIKLKKEVEKERILLHVTASDKDDGD 748
Query: 133 NAVVYYSVPE--DIPFVVDANTGDI 155
NA++ Y + + F +DA +G I
Sbjct: 749 NALIEYRLESGGEGLFQLDARSGAI 773
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 68/167 (40%), Gaps = 30/167 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRL---------LDNNTDAASYFNLDPATEHQGP-------I 76
L+ V A+DKD G L+EYRL LD + A S PA+ H P
Sbjct: 736 LLHVTASDKDDGDNALIEYRLESGGEGLFQLDARSGAISLRGDAPASMHWKPHYKLLVSA 795
Query: 77 QDEGGLSST--ATVNIRVTDIND--KNPEFQSLPYEFSVPE-------GQDGLAVGRVHA 125
+D G S A V I + + + + Q+ YEF + E Q VG V
Sbjct: 796 RDAGQRRSQQDAIVEIVLKSKLEMLECGQAQAGGYEFQMVEDHEQQRNSQPNREVGIVQV 855
Query: 126 TDADEGQNAVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLY 169
+ N+ + Y + + F +D +G I T + LD E+Q Y
Sbjct: 856 KSTNGKANSHIEYDIIQGDRAQNFRIDTRSGRITTARPLDREEQANY 902
Score = 35.8 bits (81), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVV 136
D L S + + VTD ND P + L Y V E + + V A+D D G N V
Sbjct: 2786 DTPSLRSVTLITLNVTDANDNAPVMEQLIYNAEVLEEESPPQLIAVVKASDRDSGDNGNV 2845
Query: 137 YYSVPEDIPFVVD-ANTGDIRTNKALDYEK 165
Y + D + +G+I T LD E+
Sbjct: 2846 IYRLQNDFDGTFEITESGEIYTRMRLDREE 2875
>gi|410948481|ref|XP_003980967.1| PREDICTED: protocadherin beta-12 [Felis catus]
Length = 533
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 72/172 (41%), Gaps = 20/172 (11%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
FY + LG ++ V A D DSGK G + Y + D F ++ +
Sbjct: 246 FYEVKIPENSILGSLIVTVSAWDLDSGKNGEISYSFSHASEDIRKTFEINQKSGKVSLTA 305
Query: 71 --------EHQGPIQ--DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAV 120
+ IQ D GGL +TV I+V D+ND PE +PE V
Sbjct: 306 SMDFETIESYSVIIQATDGGGLFGKSTVRIQVMDVNDNAPEIAISSITSPIPENSPETVV 365
Query: 121 GRVHATDADEGQNAVVYYSVPEDIPFVVDANTGD---IRTNKALDYEKQQLY 169
D D G N + S+PED+PF++ ++ + + T K LD E Q Y
Sbjct: 366 MVFSIRDRDSGDNGRMICSIPEDLPFMLKSSVENYYTLETEKMLDRESQAEY 417
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS-- 139
S TATV + V DIND +PEF+ YE +PE G + V A D D G+N + YS
Sbjct: 223 SGTATVRVVVVDINDNSPEFEQPFYEVKIPENSILGSLIVTVSAWDLDSGKNGEISYSFS 282
Query: 140 -VPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
EDI F ++ +G + ++D+E + Y
Sbjct: 283 HASEDIRKTFEINQKSGKVSLTASMDFETIESY 315
Score = 35.4 bits (80), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVH-ATDADEGQNAVVYYSVPEDIPF 146
+ ++VTDIND +P F +PE AV + A D D G NA+ Y + + F
Sbjct: 119 IELQVTDINDHSPIFLEKEMLLEIPENSPVGAVFLLESAKDLDVGINALKNYIISPNSHF 178
Query: 147 VVDANTG-------DIRTNKALDYEKQ 166
+ ++ +KALDYE+Q
Sbjct: 179 HIKMRVNPDNRKYPELVLDKALDYEEQ 205
>gi|359067638|ref|XP_002689294.2| PREDICTED: protocadherin alpha-4 [Bos taurus]
Length = 1613
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 83/174 (47%), Gaps = 38/174 (21%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT--EHQGPIQ------------------ 77
A+D D + L+ YRL+ N YF+L+ + E + P++
Sbjct: 157 ASDADIRENALLTYRLIPNE-----YFSLEVPSNDEQEKPLELVLKKRLDREVASELLLV 211
Query: 78 ---DEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE 130
+GG L+ T +NI V D ND P F + + E ++G + R++A+D DE
Sbjct: 212 LKATDGGKPELTGTVKINITVLDANDNAPVFDKAVHRIKLLENARNGTLIIRLNASDLDE 271
Query: 131 GQNAVVYYSVPEDIP------FVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
G N + YS D+ F +D+N+G+IR N +D+E+ +L+ ++ + K
Sbjct: 272 GSNGHILYSFATDVSSNTEASFRIDSNSGEIRVNGKIDFEETKLWKLQIEAVDK 325
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 8/95 (8%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE--GQDGLAVGRVHATDADEGQNAVVYYS 139
L+ T + + V DIND +PEF+ Y+ + E ++ L + +++ATD DEG N V YS
Sbjct: 1020 LTGTVELFVCVLDINDNDPEFEQSEYKVRLMENAAKETLVI-QLNATDQDEGVNGEVTYS 1078
Query: 140 V----PEDIP-FVVDANTGDIRTNKALDYEKQQLY 169
+ P+ P F +D N G+++ N LDYE+ + Y
Sbjct: 1079 LMSIKPKGKPLFTLDENNGEVKVNGTLDYEENKFY 1113
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LS+TA+V++ V D+ND P F Y V E G + V A DAD +NA+V YS+
Sbjct: 435 LSTTASVSVEVADVNDNAPVFAQPEYTVFVKENNPPGCHIFTVSARDADAQENALVSYSL 494
Query: 141 PED-------IPFV-VDANTGDIRTNKALDYEKQQL 168
E +V V A +G + + LD+E+ +L
Sbjct: 495 VERRVGERAMSSYVSVHAESGKVYALQPLDHEELEL 530
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
LS+TA++++ V D+ND P F Y V E G + V A DAD +NA+V YS+
Sbjct: 1232 LSATASMSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAWDADAQENALVSYSL 1291
Query: 141 PED-------IPFV-VDANTGDIRTNKALDYEKQQL 168
E FV V A +G + + LD E+ +L
Sbjct: 1292 VERRVGERALSSFVSVHAESGKVYALQPLDREELEL 1327
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 69/169 (40%), Gaps = 34/169 (20%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---LDNNTDAASYFNLDPATEHQGPIQDEGGLS--- 83
G ++++ A+D D G G + Y + +NT+A+ F +D + G I+ G +
Sbjct: 258 GTLIIRLNASDLDEGSNGHILYSFATDVSSNTEAS--FRID---SNSGEIRVNGKIDFEE 312
Query: 84 -------------------STATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRV 123
TV I V DIND PE S+PE G + +
Sbjct: 313 TKLWKLQIEAVDKGNPPMFGHCTVLIEVLDINDNAPELLVTSLLLSIPEDAPLGTVITLI 372
Query: 124 HATDADEGQNAVVYYSVPEDIPFVVDA---NTGDIRTNKALDYEKQQLY 169
TD D G NA V S+ +PF + + N + + +LD EK Y
Sbjct: 373 SITDRDVGSNAQVTCSLTPHVPFKLVSTFKNYYSLVLDSSLDREKVSEY 421
Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 52/139 (37%), Gaps = 26/139 (18%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGL---------- 82
++Q+ ATD+D G G V Y L+ F LD E+ G ++ G L
Sbjct: 1059 VIQLNATDQDEGVNGEVTYSLMSIKPKGKPLFTLD---ENNGEVKVNGTLDYEENKFYEI 1115
Query: 83 ------------SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDAD 129
+ TV + + D ND +PE V E Q + + D D
Sbjct: 1116 EVQATDKGNPPMAGHCTVWVEILDANDNSPEITVTSLSLPVREDTQPSTVIALISVFDRD 1175
Query: 130 EGQNAVVYYSVPEDIPFVV 148
G N V + ++PF +
Sbjct: 1176 SGDNGQVICFLTPNVPFKI 1194
>gi|148701503|gb|EDL33450.1| mCG51196 [Mus musculus]
Length = 1018
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 79/174 (45%), Gaps = 26/174 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------- 70
F + + G L ++ ATD DSG+ + Y L DA FNLD T
Sbjct: 470 FISLSVPENNSPGAQLTKISATDADSGQNAEISYML---GFDAPPEFNLDQRTGILTAVK 526
Query: 71 ----EHQGP------IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--QD 116
E Q QD G L S ATV + V D ND +P F Y F VPE +
Sbjct: 527 KLDREKQEKYYFTVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEYNFYVPESLPKH 586
Query: 117 GLAVGRVHATDADEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLY 169
G VG + TD D G+N+ V S+ + + F +D +G IR N + D E+Q+ Y
Sbjct: 587 G-TVGLITVTDPDYGENSAVTLSILDVNDQFTIDPQSGVIRPNISFDRERQESY 639
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+ ++ + I+V D ND P F SVPE G + ++ ATDAD GQNA + Y +
Sbjct: 446 LNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNSPGAQLTKISATDADSGQNAEISYML 505
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
D P F +D TG + K LD EKQ+ Y
Sbjct: 506 GFDAPPEFNLDQRTGILTAVKKLDREKQEKY 536
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 10/98 (10%)
Query: 78 DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
++GG SSTA + + V D ND +P F E S+PE G +V ++HATDAD G+N
Sbjct: 222 EDGGFPQRSSTAILQVSVADTNDNHPIFIEKEIEVSIPENAPIGSSVTQLHATDADIGEN 281
Query: 134 AVVYYSVPEDIP------FVVDANTGDIRTNKALDYEK 165
A +++ + F ++ TG I + LD E+
Sbjct: 282 ARIHFYFSNLVSNIAKRLFHLNTTTGLITVKEPLDREE 319
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 61/146 (41%), Gaps = 30/146 (20%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP-- 75
FY + KH T+ + TD D G+ V +LD N F +DP + P
Sbjct: 577 FYVPESLPKHG---TVGLITVTDPDYGENSAVTLSILDVN----DQFTIDPQSGVIRPNI 629
Query: 76 -------------IQDEGG----LSSTATVNIRVTDINDKNPEFQSLP----YEFSVPEG 114
++ E G SSTA V I V D+ND P F P +E+ +P
Sbjct: 630 SFDRERQESYTFYVKAEDGGRVSRSSTARVTINVVDVNDNKPIFIDPPSNYSFEWVLPST 689
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV 140
G V +V A D D G NA V YS+
Sbjct: 690 NPGTVVFKVVAIDDDIGMNAEVLYSI 715
>gi|410989769|ref|XP_004001131.1| PREDICTED: protocadherin beta-8 [Felis catus]
Length = 798
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV- 140
S A +NI V DIND PEF+ Y +PE G + V ATDAD G N + YS+
Sbjct: 223 SGIAQINIEVVDINDNAPEFEQSLYRVKIPEDSPIGFLIVTVSATDADIGVNGEISYSLF 282
Query: 141 --PEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
E+I F +++ TG+IR K LD+E+ Q Y
Sbjct: 283 QASEEICKTFEINSMTGEIRLKKQLDFERIQFY 315
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 20/161 (12%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------E 71
+G ++ V ATD D G G + Y L + + F ++ T E
Sbjct: 257 IGFLIVTVSATDADIGVNGEISYSLFQASEEICKTFEINSMTGEIRLKKQLDFERIQFYE 316
Query: 72 HQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEG 131
+D G S TV +V D+ND PE + +PE V + +D D
Sbjct: 317 VNIEARDSGSFSGKCTVLTQVLDVNDNAPEITMSAFTRHIPENSPEAMVAVLSVSDLDSE 376
Query: 132 QNAVVYYSVPEDIPFVVDA---NTGDIRTNKALDYEKQQLY 169
+N + ++ D+PF++ + N + T + LD E Q Y
Sbjct: 377 ENGKINCTIQADLPFLLKSSLENFYTLVTERPLDRESQAEY 417
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L + + ++V+D+ND P F Y V E L +G V ATD D G NA V YS+
Sbjct: 431 LKTQLNITVKVSDVNDNAPAFSQTTYTLRVRENNSPALHIGSVSATDRDSGANAQVTYSL 490
Query: 141 --PED--IPFV----VDANTGDIRTNKALDYEKQQLY 169
P D +P ++A+ G + ++LDYE + +
Sbjct: 491 LPPADPQLPLASLVSINADNGQLFALRSLDYEALRAF 527
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 67/175 (38%), Gaps = 32/175 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL-------------DNNTDAASYFN 65
Y R+ + + + V ATD+DSG V Y LL N D F
Sbjct: 456 YTLRVRENNSPALHIGSVSATDRDSGANAQVTYSLLPPADPQLPLASLVSINADNGQLFA 515
Query: 66 LDP-------ATEHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVP---- 112
L A E D G LSS A V + V D ND P P S P
Sbjct: 516 LRSLDYEALRAFEFGVRAADRGSPALSSQARVRVLVLDDNDNAPFVLYPPQNGSAPCTEL 575
Query: 113 ---EGQDGLAVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKAL 161
+ G V +V A D D GQNA + Y + E F V A+ G++RT + L
Sbjct: 576 VPRAAEAGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLL 630
>gi|297295269|ref|XP_001088628.2| PREDICTED: protocadherin alpha-6-like [Macaca mulatta]
Length = 824
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 71/147 (48%), Gaps = 13/147 (8%)
Query: 34 MQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVT 93
+ VK DS + GL+ + LD DA ++ AT+ P L+ T + + V
Sbjct: 189 LDVKINSDDSKQIGLILRKSLDRE-DAPAHNLFLTATDGGKP-----ELTGTVHLLVTVL 242
Query: 94 DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP------F 146
D+ND P F+ YE + E D G V R++A+D DEG N + YS + F
Sbjct: 243 DVNDNAPTFEQSEYEVRIFENADNGTTVIRLNASDRDEGANGAISYSFNSLVAAMVIDHF 302
Query: 147 VVDANTGDIRTNKALDYEKQQLYLERV 173
+D NTG+I LD+E+ LY RV
Sbjct: 303 SIDRNTGEIVIRGNLDFEQVNLYKIRV 329
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 76/171 (44%), Gaps = 26/171 (15%)
Query: 24 RDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN-----TDAASYFNL--DPATEHQG-- 74
R+ + G + + D DSG G V L + + +Y++L D A + +
Sbjct: 369 REDAQFGTVIALISVNDLDSGVNGQVTCSLTPHVPFKLVSTFKNYYSLVLDSALDRENVS 428
Query: 75 ------PIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHA 125
+D G L +TA+V++ V D+ND P F Y V E G + V A
Sbjct: 429 AYELVVTARDRGSPSLWATASVSVGVADVNDNAPAFTQSEYTVFVKENNPPGCHIFTVSA 488
Query: 126 TDADEGQNAVVYYSVPED-------IPFV-VDANTGDIRTNKALDYEKQQL 168
DAD +NA+V YS+ E +V V A +G + + LD+E+ +L
Sbjct: 489 RDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYALQPLDHEEVEL 539
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 68/184 (36%), Gaps = 45/184 (24%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN-------------NTDAASYFN 65
Y ++ + G + V A D D+ + LV Y L++ + ++ +
Sbjct: 469 YTVFVKENNPPGCHIFTVSARDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYA 528
Query: 66 LDPA-------TEHQGPIQDEG--GLSSTATVNIRVTDINDKNPEF-------------Q 103
L P + Q +D G L S T+ + V D ND P +
Sbjct: 529 LQPLDHEEVELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPVLLAPRVGGTGGAVSE 588
Query: 104 SLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSV-----PEDIPFVVDANTGDIRTN 158
LP V G V +V A DAD G NA + Y + PF V TG+I T
Sbjct: 589 LLPRSVGV-----GQVVAKVRAVDADSGYNAWLSYELQPVASSARFPFRVGLYTGEISTT 643
Query: 159 KALD 162
+ LD
Sbjct: 644 RVLD 647
Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 67/164 (40%), Gaps = 24/164 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL-------------LDNNT-DAASYFNLDPATEHQGP 75
G T++++ A+D+D G G + Y +D NT + NLD +
Sbjct: 267 GTTVIRLNASDRDEGANGAISYSFNSLVAAMVIDHFSIDRNTGEIVIRGNLDFEQVNLYK 326
Query: 76 IQ----DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDA 128
I+ D+G ++ TV +R+ D ND PE V E Q G + + D
Sbjct: 327 IRVDATDKGHPPMAGHCTVLVRILDKNDNVPEITLTSLSLPVREDAQFGTVIALISVNDL 386
Query: 129 DEGQNAVVYYSVPEDIPFVVDA---NTGDIRTNKALDYEKQQLY 169
D G N V S+ +PF + + N + + ALD E Y
Sbjct: 387 DSGVNGQVTCSLTPHVPFKLVSTFKNYYSLVLDSALDRENVSAY 430
>gi|48147006|emb|CAD92447.1| protocadherin [Mus musculus]
Length = 1177
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 76/162 (46%), Gaps = 26/162 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G L ++ ATD DSG+ + Y L DA FNLD T E Q
Sbjct: 482 GAQLTKISATDADSGQNAEISYML---GFDAPPEFNLDQRTGILTAVKKLDREKQEKYYF 538
Query: 76 ---IQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG--QDGLAVGRVHATDA 128
QD G L S ATV + V D ND +P F Y F VPE + G VG + TD
Sbjct: 539 TVLAQDNGIPPLMSNATVFVTVLDQNDNSPIFTHNEYNFYVPESLPKHG-TVGLITVTDP 597
Query: 129 DEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLY 169
D G+N+ V S+ + + F +D +G IR N + D E+Q+ Y
Sbjct: 598 DYGENSAVTLSILDVNDQFTIDPQSGVIRPNISFDRERQESY 639
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+ ++ + I+V D ND P F SVPE G + ++ ATDAD GQNA + Y +
Sbjct: 446 LNQSSMLLIKVKDENDNAPVFTQSFISLSVPENNSPGAQLTKISATDADSGQNAEISYML 505
Query: 141 PEDIP--FVVDANTGDIRTNKALDYEKQQLY 169
D P F +D TG + K LD EKQ+ Y
Sbjct: 506 GFDAPPEFNLDQRTGILTAVKKLDREKQEKY 536
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 10/98 (10%)
Query: 78 DEGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
++GG SSTA + + V D ND +P F E S+PE G +V ++HATDAD G+N
Sbjct: 222 EDGGFPQRSSTAILQVSVADTNDNHPIFIEKEIEVSIPENAPIGSSVTQLHATDADIGEN 281
Query: 134 AVVYYSVPEDIP------FVVDANTGDIRTNKALDYEK 165
A +++ + F ++ TG I + LD E+
Sbjct: 282 ARIHFYFSNLVSNIAKRLFHLNTTTGLITVKEPLDREE 319
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 61/146 (41%), Gaps = 30/146 (20%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP-- 75
FY + KH T+ + TD D G+ V +LD N F +DP + P
Sbjct: 577 FYVPESLPKHG---TVGLITVTDPDYGENSAVTLSILDVN----DQFTIDPQSGVIRPNI 629
Query: 76 -------------IQDEGG----LSSTATVNIRVTDINDKNPEFQSLP----YEFSVPEG 114
++ E G SSTA V I V D+ND P F P +E+ +P
Sbjct: 630 SFDRERQESYTFYVKAEDGGRVSRSSTARVTINVVDVNDNKPIFIDPPSNYSFEWVLPST 689
Query: 115 QDGLAVGRVHATDADEGQNAVVYYSV 140
G V +V A D D G NA V YS+
Sbjct: 690 NPGTVVFKVVAIDDDIGMNAEVLYSI 715
>gi|326663971|ref|XP_001343759.4| PREDICTED: protocadherin-23-like [Danio rerio]
Length = 3222
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 82/168 (48%), Gaps = 24/168 (14%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN------------LDPATEHQGP 75
E+G+ + V A DKD G+ G V Y + N SYF+ LD ++H
Sbjct: 1526 EVGLLVHHVMAKDKDEGRNGHVTYSVSSGN--EKSYFHMESTGHLFLNSSLDYESQHVHI 1583
Query: 76 I----QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+ +D G LSST T+ ++V D+ND P FQ Y +V E +D G + +V D
Sbjct: 1584 LIVQARDNGVPSLSSTQTLTVKVLDVNDHPPVFQQHIYNTTVIENRDPGEIIVQVTTVDL 1643
Query: 129 DEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
D N+ V YS+ P F ++++TG I T+ LD E Q + RV
Sbjct: 1644 DSEVNSAVSYSLLPGPGYELFRINSHTGHISTSVRLDREIQSTFTLRV 1691
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 56/99 (56%), Gaps = 7/99 (7%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYSV 140
LSS T I+VTD+ND P F YE S+ E + G AV RV ATD D G ++ + YS+
Sbjct: 432 LSSVITFQIQVTDVNDNPPVFHQTIYEESIDEDVRVGTAVFRVKATDKDLGGDSEIIYSI 491
Query: 141 ---PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176
+ PF +D G I T ALD+E+++ E FL+
Sbjct: 492 VQSEQKCPFNIDPTLGVITTAAALDHERER---ELRFLV 527
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAA-------------SYFNLDPATEHQGPIQ-- 77
+MQV ATD DSG G + Y ++D N + A + + + + ++ IQ
Sbjct: 2113 VMQVLATDSDSGVNGQISYFIMDGNHNNAFVIDSVRGILATNAVLDREIVSSYKLIIQAK 2172
Query: 78 DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAV 135
D G L+ T TV ++V D+ND +P S+ G V RV A D D +A
Sbjct: 2173 DMGKAPLTGTCTVRVQVVDVNDNSPTIPSMEAVTIAENLPLGYIVTRVIANDVDLSPSAT 2232
Query: 136 VYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERV 173
+D F +D TG I T K LDYE+Q +Y +V
Sbjct: 2233 YRLIEKDDTSRSFAIDLYTGIITTTKILDYEEQSVYTLKV 2272
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 77/159 (48%), Gaps = 27/159 (16%)
Query: 36 VKATDKDSGKFGLVEYRLLD-------------------NNTDAASYFNLDPATEHQGPI 76
V+A+D D+G G ++Y + D + + ++Y L A +H P
Sbjct: 1742 VQASDIDNGLNGTIQYSIEDLECFSIDAVTGMIRTTRPLDREERSNYSLLITAADHGHP- 1800
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAV 135
LSS+A ++I +TD ND +P F Y S+ EG G + + A D DEG N V
Sbjct: 1801 ----PLSSSALLHITLTDENDNSPLFARKSYRASISEGLPVGTEILHLIAWDPDEGANGV 1856
Query: 136 VYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLER 172
V +S+ E+ F VD +TG I+ K LD E + ++ R
Sbjct: 1857 VTFSLEEENSGNFHVDGSTGVIKLTKPLDRETRSQHVFR 1895
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 24/168 (14%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLD--NNTDAASYFNLDPATEHQGP 75
FY A ++ +G ++QV A D D +FG V+Y L D + D +F+++ T +
Sbjct: 561 FYNATVKEHTAVGTCILQVTAIDADGAEFGSVQYFLYDGFSGKDVHPFFHINSVTGNICV 620
Query: 76 IQ------------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQD 116
Q D+ G SS V+I + D+ND P F Y SV Q
Sbjct: 621 SQDIDYEAGLLTFDLLIKAEDQDGFSSQTFVHIGIEDVNDNAPVFNPGKYVTSVSVHAQP 680
Query: 117 GLAVGRVHATDADEGQNAVVYYSV-PEDIP--FVVDANTGDIRTNKAL 161
G + V+A+D D G + Y + P D F +D +TG + + +L
Sbjct: 681 GTELLNVYASDQDAGNYGKITYELQPGDSATLFTMDQSTGSVYLSSSL 728
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 72/174 (41%), Gaps = 27/174 (15%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH----- 72
Y + + G ++QV D DS V Y LL F ++ T H
Sbjct: 1620 IYNTTVIENRDPGEIIVQVTTVDLDSEVNSAVSYSLLPG--PGYELFRINSHTGHISTSV 1677
Query: 73 ------------QGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
+ +D G LSST TV V D ND P+F +PE L
Sbjct: 1678 RLDREIQSTFTLRVQAEDSGTPSLSSTTTVLCSVLDENDNAPQFSQPDLHIVIPEN---L 1734
Query: 119 AVGRVH---ATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
A G +H A+D D G N + YS+ + F +DA TG IRT + LD E++ Y
Sbjct: 1735 APGVIHIVQASDIDNGLNGTIQYSIEDLECFSIDAVTGMIRTTRPLDREERSNY 1788
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 80/164 (48%), Gaps = 29/164 (17%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------ATEHQGP--- 75
+G + +VKATDKD G + Y ++ ++ FN+DP A +H+
Sbjct: 466 RVGTAVFRVKATDKDLGGDSEIIYSIV--QSEQKCPFNIDPTLGVITTAAALDHEREREL 523
Query: 76 ----IQDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATD 127
+ +GG LSSTATV I V D+ND P F Y +V E G + +V A D
Sbjct: 524 RFLVVASDGGSPSLSSTATVIIHVEDVNDNKPIFPQKFYNATVKEHTAVGTCILQVTAID 583
Query: 128 ADEGQNAVVYYSV-----PEDI-PFV-VDANTGDIRTNKALDYE 164
AD + V Y + +D+ PF +++ TG+I ++ +DYE
Sbjct: 584 ADGAEFGSVQYFLYDGFSGKDVHPFFHINSVTGNICVSQDIDYE 627
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
L+S+ V+++V DIND P F S Y V E GL + +V A D D G N + Y++
Sbjct: 2500 LNSSTVVSVKVLDINDNAPAFSSPEYHAQVSENSPVGLVLVQVSAYDPDLGANGTITYNI 2559
Query: 141 PEDIP---FVVDANTGDIRTNKALDYEK 165
VD++TG I+ N LDYE+
Sbjct: 2560 ISGNSKGLITVDSSTGVIKVNGTLDYEE 2587
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 80/179 (44%), Gaps = 32/179 (17%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------------EH 72
G L+ V A+D+D+G +G + Y L D+A+ F +D +T +
Sbjct: 681 GTELLNVYASDQDAGNYGKITYEL--QPGDSATLFTMDQSTGSVYLSSSLMQLRSSSVKL 738
Query: 73 QGPIQDEGGLSSTATVNIRVTDINDKNPE--FQSLPYEFSVPE-GQDGLAVGRVHA-TDA 128
+D GG+S+ NI V + P FQ Y FS+ E G +VG V A T A
Sbjct: 739 SVSARDGGGMSAAYPANITVNILQSDQPPALFQKAQYTFSISEDAPVGSSVGLVQAITPA 798
Query: 129 DEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSYL 184
+ + VV Y + P F +D+ TG I T + LD+E + V L +F T L
Sbjct: 799 NSVE--VVSYVISSGDPQGFFSIDSQTGIINTAQPLDHES----ISYVILNIQFHTGTL 851
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 69/184 (37%), Gaps = 43/184 (23%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD 78
Y A + +G+ L+QV A D D G G + Y ++ N+ +D +T G I+
Sbjct: 2525 YHAQVSENSPVGLVLVQVSAYDPDLGANGTITYNIISGNSKG--LITVDSST---GVIKV 2579
Query: 79 EGGLS------------------------STATVNIRVTDINDKNPEFQSLPYEFSVPEG 114
G L S A V I V D ND +P F Y SV E
Sbjct: 2580 NGTLDYEEDTKLTLTVQASDWGTSDDKKVSFAVVYILVLDENDNSPFFMFPTYNCSVSEN 2639
Query: 115 QDGLA-VGRVHATDADEGQNAVVYYSVPEDI-------------PFVVDANTGDIRTNKA 160
V VHA D D G ++ YS+ F +D TGDI T +
Sbjct: 2640 LPAFTPVCTVHAVDEDAGTFGLLSYSIVTPCFVDYDSSNPDKKEAFGIDPLTGDIHTKQT 2699
Query: 161 LDYE 164
DYE
Sbjct: 2700 FDYE 2703
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 73/175 (41%), Gaps = 21/175 (12%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-----DAASYF-----NLDP 68
Y A + +G ++ + A D D G G+V + L + N+ D ++ LD
Sbjct: 1827 YRASISEGLPVGTEILHLIAWDPDEGANGVVTFSLEEENSGNFHVDGSTGVIKLTKPLDR 1886
Query: 69 ATEHQGPIQ-------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE--GQDGLA 119
T Q + EG SS ATV I+V DIND P P SV +
Sbjct: 1887 ETRSQHVFRAVATDGCSEGPRSSIATVTIQVEDINDNTPACVKEPMRVSVSSVNTRPNRP 1946
Query: 120 VGRVHATDADEGQNAVVYYSVP-EDIPFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ +V A D D G N V + +P ED F VD +G +R L E L R+
Sbjct: 1947 IAKVTAQDPDLGDNGTVVFRLPEEDELFQVDG-SGAVRLKAPLSNEVSGTKLLRI 2000
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD--GLAVGRVHATDADEGQNAVVYYS 139
+ +TATV + V D ND P F Y FSV EG GL +G V A+D D N V+ +
Sbjct: 1069 MEATATVVVMVQDENDNAPVFSRDVYFFSVQEGPSPHGL-IGTVKASDRDSLNNGVLSFI 1127
Query: 140 VPEDIP-FVVDANTGDIRTNKALDYEKQQLYLERVFL 175
+ D F V++ TG+I ALD E+Q ++ RV +
Sbjct: 1128 LLTDGKYFSVNSRTGEIINLVALDREEQAQHVLRVMV 1164
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 92 VTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE--DIPFVV 148
V DIND +P F S+ VPE + GL V V A D DEG+N V YSV + +
Sbjct: 1503 VLDINDNSPTFVSMDIA-CVPEDTEVGLLVHHVMAKDKDEGRNGHVTYSVSSGNEKSYFH 1561
Query: 149 DANTGDIRTNKALDYEKQQLYL 170
+TG + N +LDYE Q +++
Sbjct: 1562 MESTGHLFLNSSLDYESQHVHI 1583
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 26/134 (19%)
Query: 33 LMQVKATDKDSGKFGLVEYRLL--------DNNTDAASYFNLDPAT---------EHQG- 74
+ V A D+D+G FGL+ Y ++ +N D F +DP T +++G
Sbjct: 2646 VCTVHAVDEDAGTFGLLSYSIVTPCFVDYDSSNPDKKEAFGIDPLTGDIHTKQTFDYEGD 2705
Query: 75 -------PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHAT 126
+D+G +T V I + I++ +P F Y FS+P + G ++G + A
Sbjct: 2706 RNFCFVVEARDKGDQVATLRVRIEIEGIDEFSPIFTQNVYHFSLPANPKVGQSIGYLMAM 2765
Query: 127 DADEGQNAVVYYSV 140
D D G + +V YS+
Sbjct: 2766 DHDGGLDGLVEYSL 2779
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
Query: 76 IQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNA 134
+ + G ++ A V I + DIND P F+ Y +V EGQ V +V ATD+D G N
Sbjct: 2068 LAENGHQTAYARVAITLQDINDNAPVFKQSYYRTAVWEGQIHNTYVMQVLATDSDSGVNG 2127
Query: 135 VVYYSVPE---DIPFVVDANTGDIRTNKALDYE 164
+ Y + + + FV+D+ G + TN LD E
Sbjct: 2128 QISYFIMDGNHNNAFVIDSVRGILATNAVLDRE 2160
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 45/98 (45%), Gaps = 17/98 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDN-------NTDAASYFNLDPAT-EHQGPI-------Q 77
++ V ATDKDSGK G V YRLL + + D S F P G + +
Sbjct: 2318 VVSVLATDKDSGKNGRVSYRLLSSPVGGFYIDPDNGSVFTNKPLNYVANGNVLRLLVEAR 2377
Query: 78 DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
D G L +V+I V D ND P F Y+ ++PE
Sbjct: 2378 DSGDPNLFCVTSVDIEVADFNDNAPFFTQNSYQINIPE 2415
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSV 140
+ S+A VN+ +TDIND P FQ ++ G + HA D D G N ++Y +
Sbjct: 853 IHSSAQVNVSITDINDNPPVFQKTSEHITISRTTPPGTPLFIAHAHDTDSGFNGRIHYML 912
Query: 141 -PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
P+ F + N G + N + + Y
Sbjct: 913 HPKSHLFTIHPNLGTLMLNGDVSRDSSSRY 942
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 67/163 (41%), Gaps = 32/163 (19%)
Query: 38 ATDKDSGKFGLVEYRLLDN----------NTDAASYFNLDPA--TEHQGPIQD------- 78
A DKD G +G YR+ D ++ FNLD T I D
Sbjct: 147 AQDKDEGDYGTQGYRITDGEMRELFKVEIRSNGVGMFNLDLVLQTRLDREIADFYNFTIE 206
Query: 79 --EGGL---SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQ 132
+GG+ + I V D ND P F Y + E + V ++ ATDAD G
Sbjct: 207 AFDGGVPPKTGQLQAQITVLDENDNQPVFNQSEYHAVILENATLMTPVCQIFATDADLGS 266
Query: 133 NAVVYYSV------PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
N V Y + P + F++ +++G I NK LDYE + Y
Sbjct: 267 NGQVIYGINRRQSDPNEF-FIIGSSSGIISVNKHLDYENESYY 308
Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFSVPEGQ--DGLAVGRVHATDADEGQNAVVYYSVPED 143
A ++I+V D+ND +P F Y+ + E D V V ATD D G+N V Y +
Sbjct: 2283 AELSIQVLDVNDNSPVFSQESYQVLLSERTLADTFVVS-VLATDKDSGKNGRVSYRLLSS 2341
Query: 144 IP---FVVDANTGDIRTNKALDY 163
P F +D + G + TNK L+Y
Sbjct: 2342 -PVGGFYIDPDNGSVFTNKPLNY 2363
Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 74/158 (46%), Gaps = 23/158 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDN------------NTDAASYFNLDPATEHQGPI--QD 78
++ + A D D+G+ G V++ + DN + S F+ +P + + D
Sbjct: 1213 VISMFAKDLDAGENGTVKFSMTDNQLGHFSIDSLSGDVKVTSQFSSNPQMRYTLRVVATD 1272
Query: 79 EG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAV 135
G L TA V+I+V ++ + FQS F+V E G +G + ++A + +
Sbjct: 1273 NGLFPLEETAVVHIQVYVLDQQKENFQSSFQHFTVLEDVGLGTIIGSLGVSNAPDTE--- 1329
Query: 136 VYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ YS+ E + F + +++G++ + LDYE Q Y
Sbjct: 1330 LRYSIVEGNGSLQFGIKSSSGELYVAQHLDYEVTQRYF 1367
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 34/165 (20%)
Query: 36 VKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP------IQD 78
VKA+D+DS G++ + LL + YF+++ T E Q + D
Sbjct: 1111 VKASDRDSLNNGVLSFILLTD----GKYFSVNSRTGEIINLVALDREEQAQHVLRVMVTD 1166
Query: 79 EGG--LSSTATVNIRVTDINDKNPEFQSLP--YEFSV----PEGQDGLAVGRVHATDADE 130
+G L++T T++I VTD+ND P+F +P E +V P V + A D D
Sbjct: 1167 QGRPRLNTTTTIHITVTDVNDNRPQFTHMPSTKELNVWAVIPVNS---VVISMFAKDLDA 1223
Query: 131 GQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERV 173
G+N V +S+ ++ F +D+ +GD++ Q Y RV
Sbjct: 1224 GENGTVKFSMTDNQLGHFSIDSLSGDVKVTSQFSSNPQMRYTLRV 1268
>gi|431902348|gb|ELK08849.1| Protocadherin Fat 1 [Pteropus alecto]
Length = 4588
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 72/142 (50%), Gaps = 17/142 (11%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFN----------LDP 68
Y A + L +++VKATD DSG +G + Y ++++ Y N LD
Sbjct: 2497 YEAELAENAPLHTLVIEVKATDGDSGIYGHITYHIVNDFAKDRFYTNERGQIFTLEKLDR 2556
Query: 69 ATEHQGPI------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSV-PEGQDGLAVG 121
T + I +D GG + T+N+ +TD ND P+F++ YE ++ G +V
Sbjct: 2557 ETPAEKVIAVRLMAKDAGGKVAFCTINVILTDDNDNAPQFRATKYEVNIGSSAPKGTSVI 2616
Query: 122 RVHATDADEGQNAVVYYSVPED 143
+V A+DADEG NA V Y++ D
Sbjct: 2617 KVLASDADEGSNADVTYAIEAD 2638
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 72/160 (45%), Gaps = 23/160 (14%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQG---- 74
G +MQV ATD D + Y L + A F L+P T E Q
Sbjct: 3039 GKLIMQVSATDADIRSNAEITYTL---SGPGAEKFKLNPDTGELKTLAPLDREEQAIYNL 3095
Query: 75 --PIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG 131
D GG A + + + D+ND PEF + PY +V E + G + RV ATDAD G
Sbjct: 3096 LVKATDGGGRFCQANIMLTLEDVNDNAPEFSADPYTITVFENTEPGTPLTRVQATDADAG 3155
Query: 132 QNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
N + YS+ D F ++ +G I+ K LD E Q +Y
Sbjct: 3156 LNRKISYSLINSADGQFSINELSGIIQLEKPLDRELQSVY 3195
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 75/169 (44%), Gaps = 25/169 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN--------TDAASYF---NLD 67
YG + G ++QV A +D + Y ++ N + + F NLD
Sbjct: 3235 YGTTVSEDILTGTEILQVYAASRDIEANAEITYSIISGNEHGKFSIDSKTGAIFIIENLD 3294
Query: 68 PATEHQGPIQDE---GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL--- 118
+ H+ + E GG LS A VNI VTDIND P F Y V E D +
Sbjct: 3295 YESSHEYYLTVEATDGGTPSLSDVAAVNINVTDINDNTPVFSQDTYTAVVSE--DAVLEQ 3352
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYE 164
+V V A DAD N+ ++YS+ + PF +D G++R K LD E
Sbjct: 3353 SVITVMADDADGPSNSHIHYSIIDGNQGSPFTIDPARGEVRVTKLLDRE 3401
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 71/141 (50%), Gaps = 14/141 (9%)
Query: 40 DKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKN 99
DK SG+ L + LD+ T F++ H D+ + ++ V+I+V D ND +
Sbjct: 2754 DKQSGRLKL--EKSLDHETTKWYQFSILARCTH-----DDYEVVASVDVSIQVKDANDNS 2806
Query: 100 PEFQSLPYEFSVPEGQDGLA-VGRVHATDADEGQNAVVYYSVPEDI------PFVVDANT 152
P +S PYE + E Q G + V ++ A+D D G N V YS+ + F ++ T
Sbjct: 2807 PVLESNPYEAFIVENQPGGSRVIQIRASDLDSGTNGQVMYSLDQSQSVEVIESFSINMET 2866
Query: 153 GDIRTNKALDYEKQQLYLERV 173
G I T K LD+E++ Y +V
Sbjct: 2867 GWITTLKELDHERRDNYQIKV 2887
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 29/176 (16%)
Query: 18 FYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLD---------- 67
++ ++ DK E+ ++QV+ATDKD G G V Y +L +TD F +D
Sbjct: 827 YFVEVSEDK-EVNSEIIQVEATDKDLGSNGHVTYSIL-TDTDK---FAIDSMTGVVRVVY 881
Query: 68 PATEHQGPIQ-----------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P P+ +E L S + + + D+ND P F Y V E
Sbjct: 882 PLDREAQPVHYLKIEARDQATEEPQLFSIVLLKVSLEDVNDNPPRFIPPNYRVKVREDLP 941
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLY 169
+G + + A D D GQ++ V YS+ + + F VD +G +R + LD+EK+Q+Y
Sbjct: 942 EGTIIMWLEAYDPDLGQSSQVRYSLLDHGEGNFDVDKLSGAVRIVQQLDFEKKQVY 997
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 79/177 (44%), Gaps = 19/177 (10%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-EHQG 74
SL G ++ LG ++ + ATD D+G G + Y + N D+ +++ +
Sbjct: 719 SLPTGIEVKENRPLGSNIIFMNATDPDTGFNGKLVYAISGGNEDSCFIIDMETGMLKILS 778
Query: 75 PIQDEG-------------GLSSTAT---VNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
P+ E G+ A ++IRV D ND PEF Y V E ++
Sbjct: 779 PLDRETTDKYTLNITAFDLGMPQKAAWHLLDIRVLDANDNPPEFLQESYFVEVSEDKEVN 838
Query: 118 LAVGRVHATDADEGQNAVVYYSVPEDI-PFVVDANTGDIRTNKALDYEKQQLYLERV 173
+ +V ATD D G N V YS+ D F +D+ TG +R LD E Q ++ ++
Sbjct: 839 SEIIQVEATDKDLGSNGHVTYSILTDTDKFAIDSMTGVVRVVYPLDREAQPVHYLKI 895
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 16/126 (12%)
Query: 61 ASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLA 119
ASYF L+ T + ++ V ++V N PEF Y+ S E G
Sbjct: 431 ASYFELEVTTSDK---------RASTRVLVKVISANSNPPEFTQTAYKASFDENVPIGTT 481
Query: 120 VGRVHATDADEGQNAVVYYSVPE--DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
V V A D DEG+N V YS+ +PFV++ TG + T++ LDYE + RV+ +
Sbjct: 482 VMSVSAVDPDEGENGYVTYSIANLNPVPFVINHFTGAVSTSENLDYE----LMPRVYTLR 537
Query: 178 KFATSY 183
A+ +
Sbjct: 538 VRASDW 543
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 79 EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVY 137
+G SS A V ++V D ND +P + Y ++PE G + +V ATDAD NA +
Sbjct: 3000 DGTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPEDSFPGKLIMQVSATDADIRSNAEIT 3059
Query: 138 YSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
Y++ P F ++ +TG+++T LD E+Q +Y
Sbjct: 3060 YTLSGPGAEKFKLNPDTGELKTLAPLDREEQAIY 3093
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 73/163 (44%), Gaps = 21/163 (12%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQ---------- 77
E G L +V+ATD D+G + Y L+++ S L + + P+
Sbjct: 3139 EPGTPLTRVQATDADAGLNRKISYSLINSADGQFSINELSGIIQLEKPLDRELQSVYTLT 3198
Query: 78 ----DEG---GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD 129
D+G L++T TV + V DIND P F+ Y +V E G + +V+A D
Sbjct: 3199 LKAVDQGLPRRLTATGTVIVSVLDINDNPPVFEYREYGTTVSEDILTGTEILQVYAASRD 3258
Query: 130 EGQNAVVYYSV---PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
NA + YS+ E F +D+ TG I + LDYE Y
Sbjct: 3259 IEANAEITYSIISGNEHGKFSIDSKTGAIFIIENLDYESSHEY 3301
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP- 145
V ++V D ND P F Y S+PE ++ RV ATDAD G N YYS +
Sbjct: 135 VRVQVLDTNDLRPLFSPTSYSVSLPENTAIRTSIARVSATDADIGTNGEFYYSFKDRTDM 194
Query: 146 FVVDANTGDIRTNKALDYEKQQLYLERVFLISK 178
F + +G + LDY + QLY + + +
Sbjct: 195 FAIHPTSGAVVLTGRLDYAETQLYEMEILAVDR 227
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 74/160 (46%), Gaps = 23/160 (14%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV+ATD DS + Y + N++ + +F++D +T
Sbjct: 2288 YVATLSEASVIGTSVIQVRATDSDSEPNRGISYHMFGNHSKSHDHFHIDGSTGVISLVRT 2347
Query: 71 -------EHQGPIQD-EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGL 118
+H+ ++ +GG LSS V + VTD+ND P F YE + E G
Sbjct: 2348 LDYEQFQQHRIFVRAVDGGMPPLSSDVIVTVDVTDLNDNPPLFDQQLYEAKISEHATHGH 2407
Query: 119 AVGRVHATDADEGQNAVVYYSV---PEDIPFVVDANTGDI 155
V V A DAD + YS+ + F +D+ TG I
Sbjct: 2408 FVTCVKAHDADSSDIDKLEYSILSGNDHKNFAIDSETGII 2447
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 70/162 (43%), Gaps = 28/162 (17%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASY--FNLDPATE-------------HQGPI- 76
++Q+ A DKD K L+ L ++ D S F LDPAT HQ +
Sbjct: 1475 ILQISAVDKDE-KNKLI--YTLQSSIDPLSLKKFRLDPATGSLYTSEALDHEAIHQHILT 1531
Query: 77 -----QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE 130
QD + A + + V+D ND P F S YE V E G V +V A D D
Sbjct: 1532 VMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTSSSYEGRVYESAAVGSVVLQVTALDKDR 1591
Query: 131 GQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
G+NA V YS+ F +D G I+T K LD Q Y
Sbjct: 1592 GKNAEVVYSIESGNIGNSFTIDPILGSIKTAKELDRSSQVEY 1633
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 34/178 (19%)
Query: 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-- 70
TS+ ++Y + + + V+++Q++A D DS + Y++ N +F++ P T
Sbjct: 1139 TSEPVYYPEVMENSPK-DVSVVQIEAFDPDSSSNDKLTYKITSGNPQG--FFSIHPKTGL 1195
Query: 71 --------------EH--QGPIQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
EH + + D G S+ A + +++ D ND P+F Y+ +P
Sbjct: 1196 ITTTSRKLDREQQDEHILEVTVTDNGSPPKSTVARIIVKILDENDNKPQFLQKFYKIRLP 1255
Query: 113 EGQD--------GLAVGRVHATDADEGQNAVVYYSVP---EDIPFVVDANTGDIRTNK 159
E + + RV ATD DEG NA + YS+ E F ++ TG + + K
Sbjct: 1256 EREKPERERNAKREPIYRVIATDKDEGPNAEISYSIEDGNEHGKFFIEPKTGLVSSKK 1313
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 26/174 (14%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
+L Y A+ + +G T+ V A D+DSG+ G V Y L +++ +F + P+ E
Sbjct: 2083 NLPYYAVVKVDTAVGHTIRSVTAVDRDSGRNGEVHYYLKEHH----EHFQIGPSGEISLK 2138
Query: 76 IQ-----------------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGL 118
Q D G + +A V + VT +N P F+ Y +PE +
Sbjct: 2139 KQFEPDTLNKEYLVTVVAKDGGNPAFSAEVIVPVTVMNRAMPVFEKPFYSAEIPENIQ-M 2197
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
VH A+ + V YS+P+ P F ++ NTG I LD+E Y
Sbjct: 2198 HSPVVHV-QANSPEGLKVLYSIPDGDPFSQFSINFNTGVINVIAPLDFESHPAY 2250
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 28/173 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP-------ATE 71
Y + +G ++QV A DKD GK V Y + N + F +DP A E
Sbjct: 1567 YEGRVYESAAVGSVVLQVTALDKDRGKNAEVVYSIESGNI--GNSFTIDPILGSIKTAKE 1624
Query: 72 HQGPIQ----------DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGL 118
Q D+G +S +V++ VT ++ +P+F S Y F + E G
Sbjct: 1625 LDRSSQVEYDLMVKATDKGNPPMSEITSVHVFVTIADNASPKFTSKEYSFEISETVGTGS 1684
Query: 119 AVGRVHATDADEGQNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
VG V A Q++VVY +I F ++ ++G + T KALD+E +Y
Sbjct: 1685 FVGMVTAY----SQSSVVYEIKDGNIADAFDINPHSGSVITQKALDFETLPIY 1733
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 77/180 (42%), Gaps = 28/180 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRL-LDNNTDAASYFNLDPAT------- 70
Y A + G ++Q++A+D DSG G V Y L + + F+++ T
Sbjct: 2814 YEAFIVENQPGGSRVIQIRASDLDSGTNGQVMYSLDQSQSVEVIESFSINMETGWITTLK 2873
Query: 71 ----EHQGPIQ---------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-D 116
E + Q ++ LSSTA V + VTD+ND P F + Y+ +V E
Sbjct: 2874 ELDHERRDNYQIKVVASDYGEKVQLSSTAIVAVTVTDVNDSPPRFTAEIYKGTVSEDDPP 2933
Query: 117 GLAVGRVHATDAD--EGQNAVVYYSVPEDI--PFVVD--ANTGDIRTNKALDYEKQQLYL 170
G + + TDAD E V YY D F ++ N + K LD EK+ YL
Sbjct: 2934 GGVIAILSTTDADSEEINRQVTYYITGGDPLGQFAIENIQNEWKVYVKKPLDREKRDNYL 2993
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 75/183 (40%), Gaps = 31/183 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN--------------------NT 58
Y R+ G +M ++A D D G+ V Y LLD+ +
Sbjct: 932 YRVKVREDLPEGTIIMWLEAYDPDLGQSSQVRYSLLDHGEGNFDVDKLSGAVRIVQQLDF 991
Query: 59 DAASYFNLDPATEHQG-PIQDEGGLSSTATVNIRVTDIND--KNPEFQSLPYEFSVPEGQ 115
+ +NL + +G P+ LSST V + V D+N+ P F S + V E
Sbjct: 992 EKKQVYNLTVRAKDKGKPV----SLSSTCYVEVEVIDVNENLNPPVFSSFVEKGIVKEDV 1047
Query: 116 D-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
G +V V A D D G++ V YS+ + F +D TG I T+ LD E Y
Sbjct: 1048 PIGSSVMTVSAHDEDTGRDGEVRYSIRDGSGVGVFKIDEETGVIETSDRLDRESTSHYWL 1107
Query: 172 RVF 174
V+
Sbjct: 1108 TVY 1110
Score = 42.4 bits (98), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 11/101 (10%)
Query: 80 GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGR--------VHATDADEG 131
GLS+ TV + + D ND P F Y + E +V + ATDAD+
Sbjct: 1743 AGLSTNTTVLVHLQDENDNLPVFMQAEYTGLISESASINSVVLTDRNVPLVIRATDADKE 1802
Query: 132 QNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
NA++ Y + E F +D++TG I T +LDYE+ +
Sbjct: 1803 SNALLVYHIVEPSIHKYFAIDSSTGAIHTVLSLDYEETSTF 1843
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 32/185 (17%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGP 75
S + ++ +G ++M V A D+D+G+ G V Y + D + F +D E G
Sbjct: 1036 SFVEKGIVKEDVPIGSSVMTVSAHDEDTGRDGEVRYSIRDGS--GVGVFKID---EETGV 1090
Query: 76 IQ--------------------DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE 113
I+ D+G LSS + I V D+ND P+ Y V E
Sbjct: 1091 IETSDRLDRESTSHYWLTVYATDQGVVPLSSFTEIYIEVEDVNDNAPQTSEPVYYPEVME 1150
Query: 114 GQ-DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDI-RTNKALDYEKQQL 168
++V ++ A D D N + Y + P F + TG I T++ LD E+Q
Sbjct: 1151 NSPKDVSVVQIEAFDPDSSSNDKLTYKITSGNPQGFFSIHPKTGLITTTSRKLDREQQDE 1210
Query: 169 YLERV 173
++ V
Sbjct: 1211 HILEV 1215
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 8/102 (7%)
Query: 81 GLSSTAT-VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYY 138
G S+ T V I+V D ND P+F + YE +PE + ++ A D DE +N ++Y
Sbjct: 1434 GTSTILTQVFIKVIDTNDHRPQFSTSKYEVIIPEDTGPETEILQISAVDKDE-KNKLIYT 1492
Query: 139 SVPEDIP-----FVVDANTGDIRTNKALDYEKQQLYLERVFL 175
P F +D TG + T++ALD+E ++ V +
Sbjct: 1493 LQSSIDPLSLKKFRLDPATGSLYTSEALDHEAIHQHILTVMV 1534
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 81 GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYS 139
G + V++ V D+ND P F Y ++ E G +V +V ATD+D N + Y
Sbjct: 2262 GAHAEVFVDVIVEDVNDNPPVFVQQSYVATLSEASVIGTSVIQVRATDSDSEPNRGISYH 2321
Query: 140 V-----PEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175
+ F +D +TG I + LDYE+ Q + R+F+
Sbjct: 2322 MFGNHSKSHDHFHIDGSTGVISLVRTLDYEQFQQH--RIFV 2360
Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 29/145 (20%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNN---------TDAASYF-NLD- 67
Y A + +G T+M V A D D G+ G V Y + + N T A S NLD
Sbjct: 468 YKASFDENVPIGTTVMSVSAVDPDEGENGYVTYSIANLNPVPFVINHFTGAVSTSENLDY 527
Query: 68 -----------PATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD 116
A++ P + E + +T T+N ++ND P F+ + E ++P
Sbjct: 528 ELMPRVYTLRVRASDWGLPYRREVEVLATITLN----NLNDNTPLFEKINCEGTIPRDLG 583
Query: 117 -GLAVGRVHATDADEGQNAVVYYSV 140
G + V A DADE Q +V+Y +
Sbjct: 584 VGEQITTVSAIDADELQ--LVHYQI 606
Score = 35.8 bits (81), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 86 ATVNIRVTDINDKNPEFQSLPYEFS--VPEGQDGLAVGRVHATDADEGQNAVVYYSVPED 143
A V I V DIND P F YE S +P + G+ V V+ATDAD + + YS+ E
Sbjct: 1863 ANVTIHVIDINDCPPVFSKSLYETSLLLPTYK-GVKVITVNATDADSSAFSQLMYSITEG 1921
Query: 144 I---PFVVDANTGDI 155
F +D TG I
Sbjct: 1922 NIGEKFFMDYKTGSI 1936
>gi|380028708|ref|XP_003698032.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-related tumor
suppressor-like [Apis florea]
Length = 4483
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 81/175 (46%), Gaps = 23/175 (13%)
Query: 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT------ 70
L Y + +G L++V TD D G G V Y L D N F +D AT
Sbjct: 1224 LPYRVQVNEGAAIGTQLLRVYTTDADEGLNGDVFYSLEDGN--QYGRFAIDEATGQISLM 1281
Query: 71 -EHQGPIQDEGGLSSTA---------TVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLA 119
E D L+ A +NI+VTD ND P FQ+ Y F VPE G
Sbjct: 1282 KELDRETMDTYVLTVVAHDLLTHRDIILNIQVTDTNDNAPTFQNTAYSFDVPENMPRGSR 1341
Query: 120 VGRVHATDAD-EGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYL 170
+G+V ATDAD +G N+ + Y++ D F ++ +TG +LDYE+ Q Y+
Sbjct: 1342 IGQVVATDADADGPNSQLSYTLISDWANDVFSLNPSTGVFTLTASLDYEQVQHYI 1396
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 53 LLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP 112
LL NT +SY L+ G + L V I +TD+ND P+FQ LPY V
Sbjct: 1177 LLVTNT-GSSYITLEATVTDNGVNR----LRDRVKVVIYITDVNDNIPQFQRLPYRVQVN 1231
Query: 113 EGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQL 168
EG G + RV+ TDADEG N V+YS+ + F +D TG I K LD E
Sbjct: 1232 EGAAIGTQLLRVYTTDADEGLNGDVFYSLEDGNQYGRFAIDEATGQISLMKELDRETMDT 1291
Query: 169 YL 170
Y+
Sbjct: 1292 YV 1293
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 18/154 (11%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI----QDE---- 79
E+G ++++ ++D D G+ V YR +N + L G + QDE
Sbjct: 2284 EIGTFVIRITSSDLDIGQNANVSYRFTENPGQKFAMDALSGNVTVNGHLDREEQDEYLLK 2343
Query: 80 -----GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA-VGRVHATDAD-EGQ 132
G + + I + D ND PEF Y F PE Q +A VG+V A D D +G
Sbjct: 2344 LVAADGAWQAATALTITIQDQNDNPPEFDEESYHFHFPELQPSVAHVGQVTAIDRDKQGP 2403
Query: 133 NAVVYYSV--PEDIPFVVDANTGDIRTNKALDYE 164
N+V+ YS+ P D+ F VD TGD+ + K L Y+
Sbjct: 2404 NSVISYSLLQPSDL-FTVDPATGDVFSKKTLKYK 2436
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 90/178 (50%), Gaps = 20/178 (11%)
Query: 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDN----------NTDAASYF 64
++ Y A ++ + + +V A D+DSG+ G V Y L+++ N + ++
Sbjct: 2168 EAAIYNATVPEEEYPPLFVSKVSAKDRDSGENGQVSYYLVNDFTETFIIDSDNGEISTNA 2227
Query: 65 NLD----PATEHQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
LD + E +DEG L+ TATV + V D ND P+F L + +V E + G
Sbjct: 2228 KLDREEIASYELIVEARDEGQPSLTGTATVLVTVLDKNDNPPQFTRL-FSVNVTENAEIG 2286
Query: 118 LAVGRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYLERV 173
V R+ ++D D GQNA V Y E+ F +DA +G++ N LD E+Q YL ++
Sbjct: 2287 TFVIRITSSDLDIGQNANVSYRFTENPGQKFAMDALSGNVTVNGHLDREEQDEYLLKL 2344
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYYSVP 141
SSTATV + + D+ND +P F Y +VPE G +VG+V ATDAD +NA V YS+
Sbjct: 699 SSTATVILTLKDVNDNSPVFYPWRYLMAVPEDAPPGTSVGKVMATDADARENAQVRYSLE 758
Query: 142 E--DIPFVVDANTGDIRTNKALDYEKQQLY 169
+ F VD TG+I +L + LY
Sbjct: 759 SGGEGLFAVDERTGEITLQGSLRAAHKTLY 788
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 70/160 (43%), Gaps = 20/160 (12%)
Query: 30 GVTLMQVKATDKDSGKFG-LVEYRLLDNNTD-------AASYFNLDPATEHQGP------ 75
G ++QVKA D D+ + V Y L + +TD F L P P
Sbjct: 1765 GGFVIQVKAYDADTPPYNDQVRYFLKEGDTDLFRINASTGDIFLLRPLDRELVPEYTLTL 1824
Query: 76 -IQDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEG 131
D G L+ + V I V D+ND PEF Y +V E V + HATD DEG
Sbjct: 1825 VAMDTGSPPLTGSGIVRIVVLDVNDHIPEFTRQEYRATVTENSVSRTWVTKPHATDKDEG 1884
Query: 132 QNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLY 169
NA + YS+ F VD TG++ T LD E+ +Y
Sbjct: 1885 LNAKIRYSLLGENSERFTVDPETGEVFTVVPLDREQTSVY 1924
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 22/156 (14%)
Query: 33 LMQVKATDKDSGKFGLVEYRLL-----------DNNTDAASY--FNLDPATEHQGPI--- 76
+ +V A D DS K+ ++EY++L ++ + S F+ + A E+ I
Sbjct: 2713 VYKVIAKDIDSPKYAVIEYKILGGTGKDHFRIREDTGEITSLISFDYEEANEYTLDIVAA 2772
Query: 77 --QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
+ TV +RVT +N+ P+F + V E + G +VG V ATD D G++
Sbjct: 2773 NPDSNPQMVGFTTVLVRVTGVNEYYPKFIQPVFHMDVSESAEVGTSVGLVQATDQDAGED 2832
Query: 134 AVVYY---SVPEDIPFVVDANTGDIRTNKALDYEKQ 166
VYY D F + + TG IR ++ LD E Q
Sbjct: 2833 GRVYYLFVGSSNDRGFSIGSETGIIRVSRRLDRETQ 2868
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 78 DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVV 136
D L S + + VTD ND P ++ Y +VPE + L V +V A D D G+N V
Sbjct: 2143 DTPALRSVVQLLVNVTDANDNAPVMEAAIYNATVPEEEYPPLFVSKVSAKDRDSGENGQV 2202
Query: 137 YYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLY 169
Y + D F++D++ G+I TN LD E+ Y
Sbjct: 2203 SYYLVNDFTETFIIDSDNGEISTNAKLDREEIASY 2237
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 77/176 (43%), Gaps = 33/176 (18%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLL--DNNTD-----------AASYFN 65
Y A + +G +++QV A D+D G G V Y + D+N D A N
Sbjct: 1643 YSATVAENASIGASVLQVSAMDRDEGANGRVRYGIAMGDDNRDFTISEDGGVIRVAKNLN 1702
Query: 66 LDPATEHQGPIQDEGGLSS--------TATVNIRVTDINDKNPEFQSLPY-----EFSVP 112
+ + + I+ E S TA V I V DIND P F PY E VP
Sbjct: 1703 FERKSRYYLTIRGEDCASEVGETPRGDTAQVTITVLDINDNAPVFLDSPYLAHVMENMVP 1762
Query: 113 EGQDGLAVGRVHATDADEGQ-NAVVYYSVPE---DIPFVVDANTGDIRTNKALDYE 164
G G V +V A DAD N V Y + E D+ F ++A+TGDI + LD E
Sbjct: 1763 PG--GGFVIQVKAYDADTPPYNDQVRYFLKEGDTDL-FRINASTGDIFLLRPLDRE 1815
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEGQNAVVYY--- 138
S+TA + I V D+ND P FQ Y + E G V + ATDAD G NA +YY
Sbjct: 486 SATAYLVIHVNDVNDHEPVFQQSEYSAVLSELSPIGSFVASISATDADSGLNARIYYELD 545
Query: 139 SVPEDIPFVVDANTGDIRTNKALDYEKQ 166
S E F +D +TG + T LD E Q
Sbjct: 546 SGNEQGWFAIDQDTGLVTTIATLDREVQ 573
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 80/186 (43%), Gaps = 30/186 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A+ + +G + + ATD DSG + Y L N +F +D T
Sbjct: 510 YSAVLSELSPIGSFVASISATDADSGLNARIYYELDSGNEQG--WFAIDQDTGLVTTIAT 567
Query: 71 ---EHQGPIQ------DEGGLSSTATVNIRVT--DINDKNPEFQSLPYEFSVPEGQDGLA 119
E QG I+ D G A+ +++VT D ND+ P F + ++ E +
Sbjct: 568 LDREVQGSIELHVSARDGGPSPKYASTHLKVTILDENDEAPRFSQNVVQVTLSENTPPQS 627
Query: 120 -VGRVHATDADEGQNAVVYY----SVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLER 172
V + A D D+G N V Y SVP D P F +D TG + T LD E Y R
Sbjct: 628 LVATLTAVDNDQGTNGSVAYSFHSSVPRDYPKTFALDGLTGQLTTKVHLDRETIAEY--R 685
Query: 173 VFLISK 178
+ +I+K
Sbjct: 686 ILVIAK 691
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 68/163 (41%), Gaps = 33/163 (20%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVN--I 90
+M +KA D+D G+ G VEY L D F + P G ++ G L N +
Sbjct: 1554 VMAIKAVDRDEGRNGYVEYSLEDTTLP----FTVGPV---DGLLRVSGSLDRELRSNYTL 1606
Query: 91 RVT--------------------DINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD 129
VT D ND +P F Y +V E G +V +V A D D
Sbjct: 1607 EVTAKDRGEPPRSSSTTVTVTVLDKNDNSPVFDPRQYSATVAENASIGASVLQVSAMDRD 1666
Query: 130 EGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
EG N V Y + ++ F + + G IR K L++E++ Y
Sbjct: 1667 EGANGRVRYGIAMGDDNRDFTISEDGGVIRVAKNLNFERKSRY 1709
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 76/164 (46%), Gaps = 27/164 (16%)
Query: 30 GVTLMQVKATDKDS-GKFGLVEYRLLDNNTDAASYFNLDPAT--------------EHQG 74
G + QV ATD D+ G + Y L+ + A F+L+P+T +H
Sbjct: 1339 GSRIGQVVATDADADGPNSQLSYTLISDW--ANDVFSLNPSTGVFTLTASLDYEQVQHYI 1396
Query: 75 PI--QDEGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDA 128
+ +GG LSST TV V D+ND P F++ P+ + E G + V A D
Sbjct: 1397 LVVQATDGGIPALSSTVTVYCNVVDLNDNAPIFEAGPHAVDIVENTTIGTPILSVTAQDL 1456
Query: 129 DEGQNAVVYYSVP---EDIPFVVDANTGDIRTNKALDYEKQQLY 169
D G N V Y+V E+ F V N G + T K LD E++ LY
Sbjct: 1457 DSGDNGRVIYAVAGGDENGDFGVAPN-GTLFTRKLLDREQKPLY 1499
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 72/162 (44%), Gaps = 22/162 (13%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLL--DNNTD-----AASYFNLDPATEHQGPIQD--- 78
+G ++ V A D DSG G V Y + D N D + F Q P+ +
Sbjct: 1444 IGTPILSVTAQDLDSGDNGRVIYAVAGGDENGDFGVAPNGTLFTRKLLDREQKPLYNLVL 1503
Query: 79 ---------EGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDA 128
LSST V + + D+ND +PEF S P + S+ E V + A D
Sbjct: 1504 SATDSPPPPGLPLSSTVQVTVVLLDVNDMSPEFIS-PTKISIIENAPSNTVVMAIKAVDR 1562
Query: 129 DEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQQLY 169
DEG+N V YS+ + +PF V G +R + +LD E + Y
Sbjct: 1563 DEGRNGYVEYSLEDTTLPFTVGPVDGLLRVSGSLDRELRSNY 1604
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 62/144 (43%), Gaps = 20/144 (13%)
Query: 38 ATDKDSGKFGLVEYRLLDNNTD-------AASYFNLDPATEHQGPI-------QDEGGL- 82
ATDKD G + Y LL N++ F + P Q + QD
Sbjct: 1878 ATDKDEGLNAKIRYSLLGENSERFTVDPETGEVFTVVPLDREQTSVYHLTLVAQDSSPTE 1937
Query: 83 --SSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADEGQNAVVYYS 139
+S + I V D+ND P F S Y VP + G V A D D+G+N+ + Y
Sbjct: 1938 PQASAVNLTIFVKDVNDNAPRFSSPRYTAYVPGATKSGDFVFGAKAVDDDDGENSRIVYR 1997
Query: 140 VP--EDIPFVVDANTGDIRTNKAL 161
+ + FV+D+N+G IR + L
Sbjct: 1998 LQGIDAEKFVIDSNSGVIRATQEL 2021
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 36/170 (21%)
Query: 29 LGVTLMQVKATDKDSGKFGLVE-YRLLDNNTDA--------------------------- 60
+G L+ ATDKD+ + G+V+ Y ++D NTD
Sbjct: 178 VGTKLLLDAATDKDTLENGVVDDYFIVDGNTDGKFRLEVTGNPTGETTYLHLETTGKLDR 237
Query: 61 --ASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-G 117
+++L+ +G G L VN+ V D+ND P FQ Y ++ E G
Sbjct: 238 EQVEFYSLNVCARDRGQPPRLGYL----LVNVTVLDVNDNPPIFQQSDYVVALNESAPIG 293
Query: 118 LAVGRVHATDADEGQNAVVYYSVPE-DIPFVVDANTGDIRTNKALDYEKQ 166
V V ATD D N+ + Y +P+ + F +D +TG + T + LD +Q
Sbjct: 294 TKVLTVRATDKDSEDNSKLTYYLPDTERQFTIDPDTGTVTTIEPLDCPQQ 343
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 25/166 (15%)
Query: 28 ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF-----------NLDPATEHQGPI 76
E+G ++ V+ATD+D+G+ G V Y + ++ D LD T+++ +
Sbjct: 2814 EVGTSVGLVQATDQDAGEDGRVYYLFVGSSNDRGFSIGSETGIIRVSRRLDRETQNRVVL 2873
Query: 77 ----QDEGGL----SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
++ GG+ + A V + + D ND PEF Y+ +V EG G V V A D
Sbjct: 2874 TVMTKNGGGIRGNDTDEAQVIVSIQDGNDP-PEFLQSAYDATVSEGAVHGTRVLTVRAVD 2932
Query: 128 AD-EGQNAVVYYSVPE---DIPFVVDANTGDIRTNKALDYEKQQLY 169
D + QN YS+ F VD TGDI T K LD E +Y
Sbjct: 2933 KDIKPQNNQFSYSIIGGNIGQAFKVDPQTGDIETAKQLDRETIPVY 2978
Score = 42.4 bits (98), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 23/163 (14%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRLLDNN----------TDAASYF---NLDPATEHQGP 75
+ T++ V ATD D G G++ Y++ N T A + + D E++
Sbjct: 2604 VNTTILTVSATDGDDGPNGMIRYKISAGNEKNEFFVHSITGAVTILEPLDYDLVQEYKLN 2663
Query: 76 IQ--DEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ--DGLAVGRVHATDAD 129
I D G + A + + V+DIND P F YE +PE D V +V A D D
Sbjct: 2664 ITATDLGFEAKQAVAILTVNVSDINDNPPTFNQSVYEAYLPENSPPDSF-VYKVIAKDID 2722
Query: 130 EGQNAVVYYSVPEDI---PFVVDANTGDIRTNKALDYEKQQLY 169
+ AV+ Y + F + +TG+I + + DYE+ Y
Sbjct: 2723 SPKYAVIEYKILGGTGKDHFRIREDTGEITSLISFDYEEANEY 2765
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 74/172 (43%), Gaps = 31/172 (18%)
Query: 33 LMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH------QGPIQDEGGLSSTA 86
+ ATD D G G V Y + D NT+ + F + P + QD L TA
Sbjct: 1027 FFSLTATDVDLGANGRVLYSVTDGNTE--NRFGIFPDGQLYVKNVLDREEQDYYALEVTA 1084
Query: 87 T------------VNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQN 133
T V + + D ND PEF + + + E + VG++ ATD D G+N
Sbjct: 1085 TDQGSPSRSSVVPVVVHIIDENDNAPEFTNSSFILHLRENEPPDTFVGKLLATDRDVGRN 1144
Query: 134 AVVYYSVPEDIP-FVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSYL 184
A + +S+P F VD G I++ +A D E L++ +SY+
Sbjct: 1145 ADLVFSLPASQQDFTVDPRNGFIKSLRAFDRE---------LLVTNTGSSYI 1187
Score = 39.3 bits (90), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 41/98 (41%), Gaps = 17/98 (17%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSV 140
LS+ V + V D+ND P F+ YE S+PE + ATD D G N V YS
Sbjct: 988 LSAQHQVRVTVEDVNDHTPVFKLTSYETSLPESTPVNDRFFSLTATDVDLGANGRVLYS- 1046
Query: 141 PEDIPFVVDANT---------GDIRTNKALDYEKQQLY 169
V D NT G + LD E+Q Y
Sbjct: 1047 ------VTDGNTENRFGIFPDGQLYVKNVLDREEQDYY 1078
Score = 38.9 bits (89), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 12/105 (11%)
Query: 82 LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE--GQDGLAVGRVHATDADEGQNAVVYYS 139
LSS ++++ V D N+ P F+ Y + VPE G V V DAD G NA + Y
Sbjct: 2462 LSSKTSIHVNVVDANNNAPRFEQRSYLYPVPENYGVGKRVVQLVARDDADFGVNAEISY- 2520
Query: 140 VPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSYL 184
F+V+ N + ++D + +Y++ + T++L
Sbjct: 2521 ------FLVNVNGSEYF---SIDEKSGWVYIQNALANVRVGTTFL 2556
>gi|344280988|ref|XP_003412263.1| PREDICTED: protocadherin-16 [Loxodonta africana]
Length = 2693
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 81/161 (50%), Gaps = 22/161 (13%)
Query: 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASY--FNLDPAT--- 70
SL ++A ++ G + + A D+D+G FG + Y LL+ + F L+ +T
Sbjct: 2104 SLLSTSLAENQPP-GTLVTTLHAIDRDAGAFGRLRYSLLEAGPGPEGWEAFALNSSTGEL 2162
Query: 71 --------EHQGPIQ------DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
EH G + D G LS++ TV++ VT ++ +P F + + F VPEG +
Sbjct: 2163 RARVPFDYEHTGSFRLLVGAADAGNLSASVTVSVLVTGEDEYDPVFLAPAFHFQVPEGAR 2222
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP-FVVDANTGDI 155
G ++G V ATD D G + +V YS+ P F ++ TG +
Sbjct: 2223 RGHSLGHVQATDEDGGADGLVLYSLATSSPYFGINQTTGAL 2263
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 78/175 (44%), Gaps = 24/175 (13%)
Query: 32 TLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQD------------- 78
TL ++A+D D G G ++Y +LD D + F LD A+ G ++
Sbjct: 1163 TLTTLRASDPDVGANGQLQYHILDG--DPSGAFVLDVASGEFGTMRSLDREVEPVFQLKI 1220
Query: 79 ---EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADEG 131
+GG LS+T V + V D ND P F Y VPE G + ++ A D DEG
Sbjct: 1221 EARDGGQPALSATLLVTVTVLDANDHAPAFPVPAYSVEVPEDAPAGTLLLQLQAHDPDEG 1280
Query: 132 QNAVVYYSVPEDI--PFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFATSYL 184
N V Y + F+++ +G++RT ALD E+ Y V + A L
Sbjct: 1281 PNGRVTYYLGAGAAGAFLLEPGSGELRTAAALDREQCPSYAFSVSAVDGAAAGPL 1335
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 72/160 (45%), Gaps = 24/160 (15%)
Query: 29 LGVTLMQVKATDKDSGKFGLVEYRL----------LDNNTDA---ASYFNLDPATEHQGP 75
+G L+ V+A+D D G GLV + L LD +T A A + + HQ
Sbjct: 2012 VGAELLHVEASDADPGPHGLVRFTLSSGDPLGLFELDESTGALHLARPLDCETQARHQLV 2071
Query: 76 IQ---DEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEG 131
+Q G + A V I V D+ND +P F S+ E Q G V +HA D D G
Sbjct: 2072 VQAADPAGAHFALAPVTIEVEDVNDHSPAFPLSLLSTSLAENQPPGTLVTTLHAIDRDAG 2131
Query: 132 QNAVVYYSVPEDIP-------FVVDANTGDIRTNKALDYE 164
+ YS+ E P F ++++TG++R DYE
Sbjct: 2132 AFGRLRYSLLEAGPGPEGWEAFALNSSTGELRARVPFDYE 2171
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 74/167 (44%), Gaps = 32/167 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQ----- 73
G ++QV+A D G V Y L + A+S F L+P + E Q
Sbjct: 411 GTQVLQVQARAPDGGP---VTYHLAADG--ASSLFGLEPQSGWLWVRAALDREAQELYTL 465
Query: 74 ------GPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHAT 126
G + G + TATV + + + ND +P P +V E Q G +VGRV AT
Sbjct: 466 KVMAVSGSKAELGQQTGTATVRVSILNQNDHSPRLSEEPTFLAVAENQPSGTSVGRVSAT 525
Query: 127 DADEGQNAVVYYSVPE----DIPFVVDANTGDIRTNKALDYEKQQLY 169
D D G N + YS+ + F + TG++ T + LD E+Q Y
Sbjct: 526 DRDSGPNGRLTYSLRQLSEDSKAFRIHPQTGEVTTLQTLDRERQSSY 572
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 78/173 (45%), Gaps = 27/173 (15%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y + R+ G +L+ ++ATD D G G V Y + + F+LDP T
Sbjct: 1049 YRVLLRENSPPGTSLLTLRATDPDLGANGQVTYGGVSGES-----FSLDPDTGVLRTLRV 1103
Query: 71 ---EHQGPI------QDEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLA 119
E Q I +D G L + V + V D ND P F S VPEGQD
Sbjct: 1104 LDREEQEEINLTVYARDRGSPPLLTHVRVRVVVEDENDHAPTFGSAHLSLEVPEGQDPQT 1163
Query: 120 VGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLY 169
+ + A+D D G N + Y + + P FV+D +G+ T ++LD E + ++
Sbjct: 1164 LTTLRASDPDVGANGQLQYHILDGDPSGAFVLDVASGEFGTMRSLDREVEPVF 1216
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 65/158 (41%), Gaps = 30/158 (18%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT----------EHQGPI--- 76
G L+Q++A D D G G V Y L AA F L+P + Q P
Sbjct: 1266 GTLLLQLQAHDPDEGPNGRVTYYL---GAGAAGAFLLEPGSGELRTAAALDREQCPSYAF 1322
Query: 77 -------QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-----GQDGLAVGRVH 124
G LS+T V I V D+ND P F + P +P LA+ +
Sbjct: 1323 SVSAVDGAAAGPLSTTVPVTITVRDVNDHIPTFPTSPLRLRLPRPGPSLSTPTLALATLR 1382
Query: 125 ATDADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKA 160
A D D G NA + Y + P VD+ TG+IR ++
Sbjct: 1383 AEDRDAGANASILYRLAGMPPPGTTVDSYTGEIRVARS 1420
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 71/155 (45%), Gaps = 17/155 (10%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRL---------LDNNTDAASY---FNLDPATEHQGPI- 76
G + V A D D G+ V YRL L ++T A S + + EH +
Sbjct: 956 GHVALHVVARDLDLGEAARVSYRLASGGDGHFRLHSSTGALSVVRPLDREQRAEHVLTVV 1015
Query: 77 -QDEGGLSSTAT--VNIRVTDINDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQ 132
D G S +AT + + V D+ND+ P FQ Y + E G ++ + ATD D G
Sbjct: 1016 ASDHGSPSRSATQLLTVSVADVNDEAPAFQQQEYRVLLRENSPPGTSLLTLRATDPDLGA 1075
Query: 133 NAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQ 167
N V Y F +D +TG +RT + LD E+Q+
Sbjct: 1076 NGQVTYGGVSGESFSLDPDTGVLRTLRVLDREEQE 1110
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 80/171 (46%), Gaps = 33/171 (19%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-----------EHQGP--- 75
G ++ +V ATD+DSG G + Y L + D+ + F + P T E Q
Sbjct: 516 GTSVGRVSATDRDSGPNGRLTYSLRQLSEDSKA-FRIHPQTGEVTTLQTLDRERQSSYQL 574
Query: 76 ---IQDEGG--LSSTATVNIRVTDINDKNPEF--------QSLPYEFSVPEG-QDGLAVG 121
+QD G S+T TV+I V D+ND +P F LP + VP+G G V
Sbjct: 575 LVQVQDGGNPPRSTTGTVHIAVLDLNDNSPTFLQASGAAGGGLPIQ--VPDGVLPGTLVT 632
Query: 122 RVHATDADEGQNAVVYYSV--PEDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+ A D DEG+N + Y++ P F + ++G++ T L ++ Y+
Sbjct: 633 TLQAKDPDEGENGTILYTLTGPGAELFSLHPHSGELLTAAPLIRAERPHYV 683
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 76/179 (42%), Gaps = 32/179 (17%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQG---- 74
Y A + G +++V+A D D G G + Y +L N+ F LD EH G
Sbjct: 85 YAASLSTQSTPGTAVLRVRAHDPDQGPHGRLSYHILAGNS--PPLFALD---EHSGLLSV 139
Query: 75 --PI--------------QDEGGLSS--TATVNIRVTDINDKNPEFQSLPYEFSVPEG-Q 115
P+ QD GGL + +A VNI + P F+ L Y FSVPE
Sbjct: 140 AWPLTRKANSVVQLEIGAQDGGGLQAEPSARVNISIVPGTPTPPVFEQLQYVFSVPEDVA 199
Query: 116 DGLAVGRVHATDADEGQNAVVYYSVPEDIP---FVVDANTGDIRTNKALDYEKQQLYLE 171
G +VG V A + G+ V ++ P F +D +G ++T LD E LE
Sbjct: 200 PGTSVGIVQAHNP-PGRLGPVTLALSGGDPRGLFSLDGASGLLQTLLPLDRELLGPVLE 257
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 70/180 (38%), Gaps = 39/180 (21%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDP---------- 68
Y A + L L+QV+A D D G G + Y L + A F++DP
Sbjct: 1571 YVAFLPESRPLEGPLLQVEANDLDQGSGGQISYSLAASQP-ARGLFHVDPATGTITTTAI 1629
Query: 69 --------------ATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE- 113
AT+ P L +AT+ + V D ND P P+E VPE
Sbjct: 1630 LDREIWAETRLVLMATDRGSP-----ALVGSATLTVMVIDTNDNRPTIPQ-PWELRVPED 1683
Query: 114 GQDGLAVGRVHATDADEGQNAVVYY----SVPEDIPFVVDANTGDIRTNKALDYEKQQLY 169
G + +V D D G V++Y S P+ PF V G + LD+E+ Y
Sbjct: 1684 ALLGSEIAQVTGNDVDSG--PVLWYVLNPSGPQH-PFSVGRYGGRVSLTGPLDFEQHNHY 1740
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP 141
SS V + V D+ND P F Y +VPE G + V A+DAD G + +V +++
Sbjct: 1978 SSAVPVTVIVLDVNDNPPVFTRASYHMAVPEDTPVGAELLHVEASDADPGPHGLVRFTLS 2037
Query: 142 EDIP---FVVDANTGDIRTNKALDYEKQQLY 169
P F +D +TG + + LD E Q +
Sbjct: 2038 SGDPLGLFELDESTGALHLARPLDCETQARH 2068
Score = 42.7 bits (99), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 20/131 (15%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLL----------DNNTDAASYFNLDPATEHQGPI--- 76
G ++ V ATD+DSG GL+ Y L +N T + +D E G +
Sbjct: 1787 GSAILSVSATDRDSGANGLISYHLASPDEGFSVDPNNGTLFITVGTVDLGQEGPGVVDVV 1846
Query: 77 ---QDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDADE 130
+D G G ++ ATV +++ D ND P F Y +V E G + + ATDAD
Sbjct: 1847 LEARDHGTPGRAAQATVYVQLQDQNDHTPSFTLPHYRVAVTEDLPPGSTLLTLEATDADG 1906
Query: 131 GQ-NAVVYYSV 140
+ +A V YS+
Sbjct: 1907 SRTHAAVDYSI 1917
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 88 VNIRVTDINDKNPEFQSLPYEFSVPEG-QDGLAVGRVHATDAD-EGQNAVVYYSV----P 141
V +RV D ND P F P ++PE + G+A+ A+DAD G N+ V Y + P
Sbjct: 817 VQVRVQDENDHAPAFARDPLALALPENPEPGVALYTFRASDADGPGPNSDVRYRLLRQEP 876
Query: 142 EDIPFVVDANTGDIRTNKALDYEKQQLYL 170
+DA TG + + LD E L
Sbjct: 877 PAPALRLDARTGALSAPRGLDRETTPALL 905
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 77 QDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVP-EGQDGLAVGRVHATDADEGQNAV 135
++ GGL ST V + V+D ND P+F Y S+ + G AV RV A D D+G +
Sbjct: 55 RERGGLKSTVYVKVFVSDENDNPPQFYPREYAASLSTQSTPGTAVLRVRAHDPDQGPHGR 114
Query: 136 VYYSV 140
+ Y +
Sbjct: 115 LSYHI 119
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 72 HQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQDGLAVGRVHATDADE 130
H GP + A + + V D+ND P F Y+ ++ E G A+ V ATD D
Sbjct: 1747 HDGPHEGR------ANLTVFVEDVNDNAPAFSQSLYQVTLLEHTPPGSAILSVSATDRDS 1800
Query: 131 GQNAVV-YYSVPEDIPFVVDANTGDI 155
G N ++ Y+ D F VD N G +
Sbjct: 1801 GANGLISYHLASPDEGFSVDPNNGTL 1826
Score = 35.8 bits (81), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 67/172 (38%), Gaps = 29/172 (16%)
Query: 30 GVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPI------------- 76
G + ++A D DSG V + LL A F +DP T H +
Sbjct: 305 GSPIYTLRALDPDSGVNSRVTFTLLAGGGGA---FTVDPNTGHVRLVGPLGPPGGPAHEL 361
Query: 77 ----QDEGGLSSTATVNIRVT--DINDKN--PEFQSLPYEFSVPEGQ-DGLAVGRVHATD 127
+D G T+ +RV D+ P F S Y +P G G V +V A
Sbjct: 362 ELEARDGGSPPRTSHFRLRVVVQDLGTHGLAPYFYSSTYRVDLPSGTTPGTQVLQVQARA 421
Query: 128 ADEGQNAVVYYSVPEDIP--FVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177
D G V Y+ + F ++ +G + ALD E Q+LY +V +S
Sbjct: 422 PDGGP--VTYHLAADGASSLFGLEPQSGWLWVRAALDREAQELYTLKVMAVS 471
>gi|344298708|ref|XP_003421033.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-24-like [Loxodonta
africana]
Length = 785
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 85/185 (45%), Gaps = 31/185 (16%)
Query: 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPAT-------- 70
Y A + +G +++QV A D D +G +L+ D +F++DP T
Sbjct: 155 YHATVPEMSNVGTSVIQVTAHDADDPSYG-NSAKLVYTVLDGLPFFSVDPQTGVVRTAIP 213
Query: 71 --------EHQGPIQDE------GGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPE-GQ 115
E IQ + GGLS + TV + ++D+ND P+F Y+FSV E
Sbjct: 214 NMDRETQEEFLVVIQAKDMGGHMGGLSGSTTVTVTLSDVNDNPPKFPQSLYQFSVVETAG 273
Query: 116 DGLAVGRVHATDADEGQNAVVYYSV-----PEDIPFVVDANTGD--IRTNKALDYEKQQL 168
G VGR+ A D D G NA++ Y++ E D+ D + KALD+E ++
Sbjct: 274 PGTLVGRLRAQDPDLGDNALMAYTILDGEGSEAFSISTDSQGRDGLLTVRKALDFETRRS 333
Query: 169 YLERV 173
Y RV
Sbjct: 334 YSFRV 338
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 63/127 (49%), Gaps = 22/127 (17%)
Query: 50 EYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEF 109
+Y LL D AS L+P +E I+V DIND P F PY
Sbjct: 114 QYVLLAQAVDRASNRPLEPPSEFI----------------IKVQDINDNPPIFPLGPYHA 157
Query: 110 SVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPEDIPFV-VDANTGDIRTN-KALDY 163
+VPE + G +V +V A DAD+ G +A + Y+V + +PF VD TG +RT +D
Sbjct: 158 TVPEMSNVGTSVIQVTAHDADDPSYGNSAKLVYTVLDGLPFFSVDPQTGVVRTAIPNMDR 217
Query: 164 EKQQLYL 170
E Q+ +L
Sbjct: 218 ETQEEFL 224
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 19/138 (13%)
Query: 44 GKFGLVEYR-LLDNNTDAASYFN-------LDPATEHQGPIQDEGGLSSTATVNIRVTDI 95
G+ GL+ R LD T + F +DPA +GP +D A+V + V D
Sbjct: 315 GRDGLLTVRKALDFETRRSYSFRVEATNTLIDPAYLRRGPFKD------VASVRVAVEDA 368
Query: 96 NDKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDAN 151
+ P F Y +VPE + G VG+V A+D D + + Y +P + F ++
Sbjct: 369 PEP-PAFTQAAYHLAVPENKAPGTLVGQVSASDLDSPASPIRYSILPHSDLERCFSIEPE 427
Query: 152 TGDIRTNKALDYEKQQLY 169
G IRT LD E + +
Sbjct: 428 DGTIRTAVPLDREARAWH 445
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.133 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,985,098,930
Number of Sequences: 23463169
Number of extensions: 129113748
Number of successful extensions: 289511
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2624
Number of HSP's successfully gapped in prelim test: 5255
Number of HSP's that attempted gapping in prelim test: 200919
Number of HSP's gapped (non-prelim): 50988
length of query: 184
length of database: 8,064,228,071
effective HSP length: 133
effective length of query: 51
effective length of database: 9,238,593,890
effective search space: 471168288390
effective search space used: 471168288390
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 72 (32.3 bits)