Query psy5886
Match_columns 184
No_of_seqs 159 out of 1128
Neff 8.9
Searched_HMMs 29240
Date Fri Aug 16 20:39:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5886.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5886hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mvs_A Cadherin-23, otocadheri 100.0 2.9E-35 1E-39 225.2 17.4 166 9-181 4-190 (210)
2 2a4e_A Cadherin-11; dimer, cal 100.0 1.8E-34 6.1E-39 221.6 19.9 160 18-181 5-192 (215)
3 2a62_A Cadherin-8; extracellul 100.0 1.2E-34 4.2E-39 234.8 15.8 166 12-181 104-302 (322)
4 2x2u_A Proto-oncogene tyrosine 100.0 8.9E-36 3E-40 233.2 7.2 165 13-180 2-220 (246)
5 2qvi_A Cadherin-2; beta barrel 100.0 3.1E-34 1.1E-38 220.3 15.2 161 20-181 6-198 (215)
6 3ppe_A Vascular endothelial ca 100.0 7.5E-33 2.6E-37 210.8 20.1 156 19-181 5-188 (203)
7 3qrb_A Cadherin-1; cell adhesi 100.0 2.9E-33 9.8E-38 214.6 16.6 160 19-181 5-199 (213)
8 3lnd_A CDH6 protein, cadherin 100.0 5.2E-34 1.8E-38 217.8 10.0 157 20-180 6-190 (207)
9 3ubf_A Neural-cadherin; cell a 100.0 8.1E-32 2.8E-36 217.7 19.9 151 19-177 113-294 (316)
10 3ubh_A Neural-cadherin; cell a 100.0 1.5E-31 5.1E-36 223.6 21.6 165 12-182 217-405 (419)
11 3k5r_A Cadherin 13; mouse, str 100.0 2.8E-32 9.7E-37 209.7 14.6 156 20-179 7-200 (218)
12 4apx_B Protocadherin-15, otoca 100.0 3.1E-31 1.1E-35 206.8 17.9 164 15-181 18-220 (242)
13 1l3w_A EP-cadherin, C-cadherin 100.0 1.9E-31 6.7E-36 229.5 15.9 168 12-180 112-313 (546)
14 3q2v_A Cadherin-1; cell adhesi 100.0 6.7E-31 2.3E-35 226.4 18.8 169 12-180 106-307 (550)
15 3q2w_A Cadherin-2; cell adhesi 100.0 2.3E-31 8E-36 229.6 15.8 168 12-179 106-309 (559)
16 1q55_A EP-cadherin, C-cadherin 100.0 2.1E-30 7.2E-35 233.2 15.9 168 12-180 261-462 (880)
17 2a62_A Cadherin-8; extracellul 100.0 5E-31 1.7E-35 213.6 10.5 159 19-181 5-191 (322)
18 3q2v_A Cadherin-1; cell adhesi 100.0 1.5E-29 5.2E-34 217.9 19.0 165 12-181 219-419 (550)
19 3ubh_A Neural-cadherin; cell a 100.0 3.5E-29 1.2E-33 209.3 18.8 153 19-179 118-301 (419)
20 1l3w_A EP-cadherin, C-cadherin 100.0 1.5E-29 5.1E-34 217.8 17.0 163 13-180 226-423 (546)
21 3q2w_A Cadherin-2; cell adhesi 100.0 6.6E-29 2.2E-33 214.3 19.5 166 12-181 221-424 (559)
22 1q55_A EP-cadherin, C-cadherin 100.0 2E-28 6.7E-33 220.5 17.2 164 12-180 374-572 (880)
23 3ubf_A Neural-cadherin; cell a 100.0 3.3E-27 1.1E-31 190.7 18.7 147 31-180 4-188 (316)
24 2ee0_A Protocadherin-9; Ca dom 99.9 5.9E-25 2E-29 152.6 8.3 92 90-181 2-100 (114)
25 2yst_A Protocadherin-7; BH-PCD 99.9 9.4E-25 3.2E-29 152.7 5.6 92 90-181 2-99 (119)
26 2yst_A Protocadherin-7; BH-PCD 99.8 2.5E-20 8.7E-25 130.1 8.5 89 12-100 12-119 (119)
27 2ee0_A Protocadherin-9; Ca dom 99.7 1.3E-17 4.4E-22 115.4 9.1 85 12-96 12-114 (114)
28 2x2u_A Proto-oncogene tyrosine 99.7 4.8E-18 1.6E-22 132.5 6.1 87 14-103 139-245 (246)
29 2a4e_A Cadherin-11; dimer, cal 99.7 1E-16 3.5E-21 122.6 10.4 86 12-101 105-215 (215)
30 1ncg_A N-cadherin; cell adhesi 99.7 2.3E-17 8E-22 113.4 6.1 82 18-102 6-110 (110)
31 2yqg_A Desmoglein-2, HDGC; cad 99.7 4.7E-18 1.6E-22 119.2 2.5 88 16-104 14-122 (123)
32 1zvn_A Mn-cadherin; strand dim 99.7 1.1E-16 3.8E-21 108.0 7.5 71 107-179 6-82 (99)
33 2yqg_A Desmoglein-2, HDGC; cad 99.7 1.3E-17 4.4E-22 117.0 1.5 85 96-181 6-98 (123)
34 3mvs_A Cadherin-23, otocadheri 99.7 8.3E-16 2.8E-20 117.1 11.0 83 13-99 108-210 (210)
35 1zxk_A Cadherin-8; strand dime 99.6 3.1E-16 1.1E-20 105.6 7.4 72 107-180 5-82 (98)
36 1wyj_A Protocadherin beta 14; 99.6 2E-17 6.8E-22 116.3 0.6 89 17-110 11-123 (125)
37 3k6i_A T-cadherin; cell adhesi 99.6 3.9E-15 1.3E-19 100.4 8.6 70 108-181 6-85 (99)
38 3k6d_A T-cadherin; cell adhesi 99.6 1.9E-15 6.4E-20 102.0 6.5 71 107-181 5-85 (99)
39 2omz_B Epithelial-cadherin; le 99.6 2.3E-15 7.7E-20 102.6 5.9 71 108-181 10-90 (105)
40 3k6f_A T-cadherin; cell adhesi 99.6 5.6E-15 1.9E-19 99.8 7.0 70 108-181 7-86 (100)
41 1ncg_A N-cadherin; cell adhesi 99.5 1.4E-14 4.7E-19 99.5 7.1 73 106-181 6-88 (110)
42 3qrb_A Cadherin-1; cell adhesi 99.5 1.1E-13 3.8E-18 105.4 9.6 83 12-94 106-213 (213)
43 1zxk_A Cadherin-8; strand dime 99.5 1.1E-13 3.7E-18 93.1 7.6 72 19-94 5-98 (98)
44 1zvn_A Mn-cadherin; strand dim 99.5 2.4E-13 8.1E-18 91.6 8.0 73 18-94 5-99 (99)
45 3lnd_A CDH6 protein, cadherin 99.4 4.5E-13 1.5E-17 101.6 10.1 80 11-94 103-207 (207)
46 2qvi_A Cadherin-2; beta barrel 99.4 2.4E-13 8.1E-18 103.8 7.9 83 12-94 106-215 (215)
47 3k5r_A Cadherin 13; mouse, str 99.4 5.4E-13 1.9E-17 101.9 9.8 83 12-94 106-218 (218)
48 3ppe_A Vascular endothelial ca 99.4 2.7E-12 9.2E-17 97.1 11.1 79 11-94 101-203 (203)
49 3k6d_A T-cadherin; cell adhesi 99.4 1.4E-12 4.7E-17 87.8 7.4 72 19-94 5-99 (99)
50 4apx_B Protocadherin-15, otoca 99.3 4.1E-12 1.4E-16 98.6 8.9 83 12-94 125-237 (242)
51 3k6f_A T-cadherin; cell adhesi 99.3 6.8E-12 2.3E-16 84.5 8.4 71 20-94 7-100 (100)
52 3k6i_A T-cadherin; cell adhesi 99.3 1.1E-11 3.8E-16 83.3 9.2 70 21-94 7-99 (99)
53 2omz_B Epithelial-cadherin; le 99.3 3.3E-12 1.1E-16 86.8 5.9 73 20-95 10-105 (105)
54 1wyj_A Protocadherin beta 14; 99.3 6.6E-13 2.3E-17 93.1 0.8 74 104-179 10-94 (125)
55 1wuz_A Pcdha4 protein, CNR-EC1 99.2 2.2E-12 7.4E-17 87.5 1.9 77 18-98 4-103 (103)
56 1wuz_A Pcdha4 protein, CNR-EC1 99.1 4.7E-12 1.6E-16 85.8 -1.4 71 105-176 3-85 (103)
57 1op4_A Neural-cadherin; beta s 94.5 0.15 5.3E-06 36.4 7.2 78 97-178 31-109 (159)
58 3pe9_A Fibronectin(III)-like m 81.6 8.4 0.00029 24.9 7.2 65 30-95 17-89 (98)
59 3pdd_A Glycoside hydrolase, fa 73.3 23 0.00078 25.5 16.5 136 31-181 18-167 (190)
60 2kpn_A Bacillolysin; solution 70.7 7.4 0.00025 25.4 4.6 68 95-181 6-73 (103)
61 2kpn_A Bacillolysin; solution 65.9 25 0.00084 22.9 6.6 58 36-100 33-91 (103)
62 2yrl_A KIAA1837 protein; PKD d 65.6 13 0.00045 23.9 5.0 28 72-100 73-100 (102)
63 3rb5_A Na/Ca exchange protein; 60.7 57 0.0019 25.3 12.8 123 12-142 12-163 (298)
64 3pe9_A Fibronectin(III)-like m 56.4 36 0.0012 21.8 7.4 50 119-181 19-75 (98)
65 3klq_A Putative pilus anchorin 42.9 55 0.0019 22.6 5.3 90 83-179 4-94 (141)
66 3us9_A Sodium/calcium exchange 42.7 1.2E+02 0.0039 23.5 15.6 124 12-142 12-181 (295)
67 2dm4_A Sortilin-related recept 34.3 81 0.0028 19.3 5.7 17 165-181 72-88 (108)
68 3ead_A Na/Ca exchange protein; 33.2 1.1E+02 0.0037 20.5 7.7 105 12-130 7-116 (137)
69 2y72_A Collagenase, collagenas 28.3 43 0.0015 20.4 2.6 20 163-182 55-74 (85)
70 1op4_A Neural-cadherin; beta s 28.1 1.6E+02 0.0053 20.7 7.8 50 15-71 37-86 (159)
71 4a2l_A BT_4663, two-component 24.5 2.6E+02 0.0089 24.1 7.8 56 121-181 709-768 (795)
72 2lkw_A Membrane fusion protein 24.4 25 0.00085 16.2 0.7 7 3-9 11-17 (26)
73 2yhg_A SDE_182CT, cellulose-bi 22.4 3.2E+02 0.011 22.5 7.4 21 72-92 414-436 (437)
74 1wf5_A Sidekick 2 protein; FNI 22.3 89 0.003 19.5 3.5 17 165-181 85-101 (121)
75 2crm_A Fibronectin type-III do 22.2 1.5E+02 0.0051 18.4 6.0 17 165-181 84-100 (120)
76 2dmk_A Midline 2 isoform 2; mi 22.0 1.6E+02 0.0056 18.8 4.9 17 165-181 89-105 (127)
77 2edy_A Receptor-type tyrosine- 21.7 92 0.0032 18.6 3.4 17 165-181 73-89 (103)
78 1x4x_A Fibronectin type-III do 20.8 1.5E+02 0.0052 18.0 5.5 18 165-182 70-87 (106)
No 1
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=100.00 E-value=2.9e-35 Score=225.20 Aligned_cols=166 Identities=29% Similarity=0.463 Sum_probs=146.1
Q ss_pred CCCCCCCCceEE--EEEeCCCCCCcEEEEEEEEeCCCCCCcEEEEEEecCCCCCcccEEEcCCCC---------------
Q psy5886 9 ALEMTSDSLFYG--AMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE--------------- 71 (184)
Q Consensus 9 ~~~~~~~~~~y~--~~v~E~~~~gt~v~~v~a~D~D~~~n~~~~y~i~~~~~~~~~~F~id~~tg--------------- 71 (184)
.+|.+.+ ..|. +.|+|++++|+.|+++.|+|+|.+ .+.|+|.+++ ..++|.|++.+|
T Consensus 4 ~~P~F~~-~~y~~~~~V~E~~~~Gt~v~~v~A~D~D~~---~~~y~i~~~~--~~~~F~Id~~tG~i~~~~~LD~E~~~~ 77 (210)
T 3mvs_A 4 RLPFFTN-HFFDTYLLISEDTPVGSSVTQLLARDMDND---PLVFGVSGEE--ASRFFAVEPDTGVVWLRQPLDRETKSE 77 (210)
T ss_dssp CCCEECC-GGGTSCEEEETTCCTTCEEEECCEECTTCC---CCEEEEESHH--HHHHEEECTTTCEEEESSCCCTTTCCE
T ss_pred CCCccCC-CccceEEEEeCCCCCCCEEEEEEEEeCCCC---cEEEEEeCCC--CCCcEEEeCCCCEEEECCccCCcccce
Confidence 3334443 3565 799999999999999999999954 5899998763 247899999998
Q ss_pred --eEEEEEeCCCCeeEEEEEEEEEeCCCCCCEEecCceEEEEeCCCC-CcEEEEEEEEeCCCCCCcEEEEEeCCC-CCEE
Q psy5886 72 --HQGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPED-IPFV 147 (184)
Q Consensus 72 --~~v~a~d~~~~~~~~~v~I~V~d~ND~~P~f~~~~~~~~v~e~~~-g~~v~~v~a~D~D~~~n~~i~y~l~~~-~~F~ 147 (184)
+.|.|+|.++ .+++.+.|.|.|+|||+|.|.+..|.+.|+|+.+ |+.|+++.|+|+|.|.|+.++|+|..+ ..|.
T Consensus 78 y~l~v~a~D~~~-~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~~~~~F~ 156 (210)
T 3mvs_A 78 FTVEFSVSDHQG-VITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDLGAGGSVLYSFQPPSPFFA 156 (210)
T ss_dssp EEEEEEEECSSC-EEEEEEEEEEECCCCCCCEECSCSEEEEEETTCCTTCEEEECCEECCSSGGGGCEEEEESSCCSSEE
T ss_pred EEEEEEEEeCCC-CEEEEEEEEEEeCCCCCCcCCCceEEEEEECCCCCCCEEEEEEEEeCCCCCCceEEEEEeCCCCCEE
Confidence 4789999765 4678999999999999999999999999999996 999999999999999999999999875 5799
Q ss_pred EECCCcEEEeCccCCccCCCeEEEEEEEEeCCCC
Q psy5886 148 VDANTGDIRTNKALDYEKQQLYLERVFLISKFAT 181 (184)
Q Consensus 148 Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~~~ 181 (184)
|++.+|.|++.++||||....|.|+|+|+|+.+.
T Consensus 157 Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g~~ 190 (210)
T 3mvs_A 157 IDSARGIVTVIQELDYEVTQAYQLTVNATDQDKT 190 (210)
T ss_dssp ECTTTCEEEECSCCCTTTCSEEEEEEEEEECCSS
T ss_pred EeCCcEEEEECCcCCCcccceEEEEEEEEECCCC
Confidence 9999999999999999999999999999999853
No 2
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=100.00 E-value=1.8e-34 Score=221.62 Aligned_cols=160 Identities=29% Similarity=0.381 Sum_probs=144.2
Q ss_pred eEEEEEeCCC--CCCcEEEEEEEEeCCCCCCcEEEEEEecCCCCCcccEEEcCCCC-----------------eEEEEEe
Q psy5886 18 FYGAMARDKH--ELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE-----------------HQGPIQD 78 (184)
Q Consensus 18 ~y~~~v~E~~--~~gt~v~~v~a~D~D~~~n~~~~y~i~~~~~~~~~~F~id~~tg-----------------~~v~a~d 78 (184)
.|.+.|.||. +.|+.|+++ |+|+|.| |+.++|+|.+++. ...|.||+.+| +.|.|+|
T Consensus 5 ~~~~~v~En~~~p~~~~v~~v-a~D~D~g-n~~i~Y~l~~~~~--~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D 80 (215)
T 2a4e_A 5 WNQFFVIEEYTGPDPVLVGRL-HSDIDSG-DGNIKYILSGEGA--GTIFVIDDKSGNIHATKTLDREERAQYTLMAQAVD 80 (215)
T ss_dssp CCEEEEETTCCSSSCEEEEEC-CCTTCCS-SSCEEEEEEETTB--TTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEE
T ss_pred EeeEEEeccCCCCCCEEEEEE-EECCCCC-CCeEEEEEECCCC--CCeEEEECCceEEEECCccCCccCCEEEEEEEEEE
Confidence 5788999994 579999999 8999998 7899999987632 36899999998 4799999
Q ss_pred CCC---CeeEEEEEEEEEeCCCCCCEEecCceEEEEeCCCC-CcEEEEEEEEeCCC---CCCcEEEEEeCCC-CCEEEEC
Q psy5886 79 EGG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPED-IPFVVDA 150 (184)
Q Consensus 79 ~~~---~~~~~~v~I~V~d~ND~~P~f~~~~~~~~v~e~~~-g~~v~~v~a~D~D~---~~n~~i~y~l~~~-~~F~Id~ 150 (184)
.+. +++++.|.|.|.|+|||+|.|.+..|.+.|+|+++ |+.|++|.|+|+|. |.|+.++|+|..+ ..|.|++
T Consensus 81 ~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~Gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~~~F~Id~ 160 (215)
T 2a4e_A 81 RDTNRPLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQVTASDADDPTYGNSAKLVYSILEGQPYFSVEA 160 (215)
T ss_dssp TTTCCEEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTCCTTCEEEECCEECSSCTTTCSSSCCEEEEEESTTTEEECT
T ss_pred CCCCCcccccEEEEEEEeeCCCCCCCccCCceEEEEECCCCCCCEEEEEEEEECCCCCCCCceEEEEEEeCCCCcEEEeC
Confidence 863 67889999999999999999999999999999996 99999999999997 7889999999865 5799999
Q ss_pred CCcEEEeC-ccCCccCCCeEEEEEEEEeCCCC
Q psy5886 151 NTGDIRTN-KALDYEKQQLYLERVFLISKFAT 181 (184)
Q Consensus 151 ~tG~i~~~-~~LD~E~~~~y~l~V~a~D~~~~ 181 (184)
.+|.|++. +.||||....|.|.|+|+|+.+.
T Consensus 161 ~tG~I~~~~~~LD~E~~~~y~l~V~A~D~g~~ 192 (215)
T 2a4e_A 161 QTGIIRTALPNMDREAKEEYHVVIQAKDMGGH 192 (215)
T ss_dssp TTCEEEECSSCCCSSSCSEEEEEEEEETTTTC
T ss_pred CccEEEEcccCCCcccCCEEEEEEEEEECCCC
Confidence 99999999 99999999999999999998753
No 3
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=100.00 E-value=1.2e-34 Score=234.75 Aligned_cols=166 Identities=35% Similarity=0.522 Sum_probs=149.5
Q ss_pred CCCCCceEEEEEeCCCCCCcEEEEEEEEeCCC---CCCcEEEEEEecCCCCCcccEEEcCCCC-----------------
Q psy5886 12 MTSDSLFYGAMARDKHELGVTLMQVKATDKDS---GKFGLVEYRLLDNNTDAASYFNLDPATE----------------- 71 (184)
Q Consensus 12 ~~~~~~~y~~~v~E~~~~gt~v~~v~a~D~D~---~~n~~~~y~i~~~~~~~~~~F~id~~tg----------------- 71 (184)
+.+.+..|.+.|+|++++|+.|+++.|+|+|. |.|++++|+|.+++ ..|.|++.+|
T Consensus 104 P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~----~~F~Id~~tG~i~~~~~~LD~E~~~~y 179 (322)
T 2a62_A 104 PEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEGQ----PYFSIEPETAIIKTALPNMDREAKEEY 179 (322)
T ss_dssp BCCSSSEEEEEECSSCCTTCBCCCCCCCBCSCSSSTTSSCEEEEEEECT----TTEEECTTTCCEEECSSCCCGGGCSEE
T ss_pred CccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCccEEEEEEEccCC----CCEEEecCCCEEEecccCCCcccCCeE
Confidence 34455689999999999999999999999996 78999999999873 5799999988
Q ss_pred -eEEEEEeCCC----CeeEEEEEEEEEeCCCCCCEEecCceEEEEeCCCC-CcEEEEEEEEeCCCCCCcEEEEEeCCC--
Q psy5886 72 -HQGPIQDEGG----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPED-- 143 (184)
Q Consensus 72 -~~v~a~d~~~----~~~~~~v~I~V~d~ND~~P~f~~~~~~~~v~e~~~-g~~v~~v~a~D~D~~~n~~i~y~l~~~-- 143 (184)
+.|+|+|.|. ++++++|.|+|.|+|||+|.|.+..|.+.|+|+++ |+.|++|.|+|+|.+.|+.++|+|..+
T Consensus 180 ~l~V~a~D~g~p~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~n~~i~Y~i~~g~~ 259 (322)
T 2a62_A 180 LVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTAIGRVKANDQDIGENAQSSYDIIDGDG 259 (322)
T ss_dssp EEEEEEEESCSSSSCCBCCEEEEEEECCCCCCCCCCSCSEEEEEECSCCSSCCEEEEEECCCSSCGGGTCCEEEEC---C
T ss_pred EEEEEEEECCCCCCCceeEEEEEEEEEecCCCCCeecCCCceeEeECCCCCCcEEEEEEEEeCCCCCCceEEEEEECCCC
Confidence 4799999873 68899999999999999999999999999999996 999999999999999999999999764
Q ss_pred -CCEEEE----CCCcEEEeCccCCccCCCeEEEEEEEEeCCCC
Q psy5886 144 -IPFVVD----ANTGDIRTNKALDYEKQQLYLERVFLISKFAT 181 (184)
Q Consensus 144 -~~F~Id----~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~~~ 181 (184)
..|.|+ ..+|.|++.++||||....|+|+|+|+|+...
T Consensus 260 ~~~F~I~~d~~~~tG~i~~~~~LD~E~~~~y~l~V~A~D~g~p 302 (322)
T 2a62_A 260 TALFEITSDAQAQDGVIRLRKPLDFETKKSYTLKVEAANIHID 302 (322)
T ss_dssp CSSBCCBCCTTTSEEEEEBCSCCCCSSCCEEEEEEEEECCCSS
T ss_pred CCcEEEeccCCCceEEEEECCcCCcccCCeEEEEEEEEECCCC
Confidence 579998 46899999999999999999999999998643
No 4
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=100.00 E-value=8.9e-36 Score=233.18 Aligned_cols=165 Identities=15% Similarity=0.087 Sum_probs=142.1
Q ss_pred CCCCceEEEEEeCCCCCCcEEEEEEEEeCCCCC--CcEEE------EEEecCCCCCcccEEEcCCCC-------------
Q psy5886 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGK--FGLVE------YRLLDNNTDAASYFNLDPATE------------- 71 (184)
Q Consensus 13 ~~~~~~y~~~v~E~~~~gt~v~~v~a~D~D~~~--n~~~~------y~i~~~~~~~~~~F~id~~tg------------- 71 (184)
.|.+..|.+.|+|++++|+.|+++.|+|+|.|. +.++. |+|..+ ...+|.||+.+|
T Consensus 2 ~F~~~~Y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~~~i~~~~~~~y~i~~~---~~~~F~Id~~tG~i~~~~~LDrE~~ 78 (246)
T 2x2u_A 2 YFSRDAYWEKLYVDQAAGTPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLH---ENNWIRIQEDTGLLYLQRSLDHSSW 78 (246)
T ss_dssp EESCSEEEEEEETTBCTTCEEEECCEECSSTTCCCCCEECSEEECGGGCEEE---ECCSEEECTTTCEEEESSCBCHHHH
T ss_pred CccCCceEEEeeCCCCCCCEEEEEEEEcCCCCCcceEEEeeccccceeccCC---CCCEEEECCCcEEEEECCcCChhHh
Confidence 356779999999999999999999999999865 55565 665544 237899999998
Q ss_pred --e--------------EEEEEeCCC----CeeEEEEEEEEEeCCCCCCE----------EecCceEEEEeCCCC-CcEE
Q psy5886 72 --H--------------QGPIQDEGG----LSSTATVNIRVTDINDKNPE----------FQSLPYEFSVPEGQD-GLAV 120 (184)
Q Consensus 72 --~--------------~v~a~d~~~----~~~~~~v~I~V~d~ND~~P~----------f~~~~~~~~v~e~~~-g~~v 120 (184)
. .|.|+|.|. ++++++|.|+|.|+|||+|. |.+..|.+.|+|+.+ |+.|
T Consensus 79 ~~y~~~~~G~p~~~~~l~V~a~D~g~~~~~~~~~~~v~I~V~DvNDn~P~~~~~~~~~~~F~~~~y~~~v~En~~~Gt~v 158 (246)
T 2x2u_A 79 EKLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCFPETRPSFRIRENRPPGTFH 158 (246)
T ss_dssp HHHHHTSTTSCCCEEEEEEECC-------CCCTTTEEEEEEEEESSCCCCGGGCCHHHHHSCSSCCCEEEEBTSCCCEEE
T ss_pred hhhccccCCCcccceEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccccccccccccCCCcEEEEEECCCCCCcEE
Confidence 2 477788773 57789999999999999999 999999999999996 9999
Q ss_pred EEEEEEeCCCCCCcEEEEEeCCC--CCEEEECCCcEEEeCccCCccCCCeEEEEEEEEeCCC
Q psy5886 121 GRVHATDADEGQNAVVYYSVPED--IPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180 (184)
Q Consensus 121 ~~v~a~D~D~~~n~~i~y~l~~~--~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~~ 180 (184)
++|.|+|+|.|.|+.++|+|..+ .+|.|++.+|.|++.+.||||....|.|+|.|+|.++
T Consensus 159 ~~v~A~D~D~g~n~~i~Y~i~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~d~dg 220 (246)
T 2x2u_A 159 QFRLLPVQFLCPQISVAYRLLEGEGLPFRSAPDSLEVSTRWALDREQREKYELVAVCTVHAG 220 (246)
T ss_dssp ECSCHHHHHHCTTSCEEEEEESCTTSSEECCTTCCEEEESSCBCTTTCSEEEEEEEEEEC--
T ss_pred EEEEEEcCCCCCCcEEEEEEccCCCCCEEEECCcCEEEeCCccCccccceEEEEEEEEecCC
Confidence 99999999999999999999875 6899999999999999999999999999999999655
No 5
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=100.00 E-value=3.1e-34 Score=220.28 Aligned_cols=161 Identities=26% Similarity=0.335 Sum_probs=145.3
Q ss_pred EEEEeCCCCCCcEEEEEEEEeCCCCCCcEEEEEEecCCC--CCcccEEEcCCCC-----------------eEEEEEeCC
Q psy5886 20 GAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT--DAASYFNLDPATE-----------------HQGPIQDEG 80 (184)
Q Consensus 20 ~~~v~E~~~~gt~v~~v~a~D~D~~~n~~~~y~i~~~~~--~~~~~F~id~~tg-----------------~~v~a~d~~ 80 (184)
.++|+||++ |+.++++.|.|.|.+.|+.++|+|.+++. +..+.|.||+.+| +.|+|+|.+
T Consensus 6 ~~~V~En~~-g~~~~~v~~~~~D~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g 84 (215)
T 2qvi_A 6 PINLPENSR-GPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDIN 84 (215)
T ss_dssp CEEEESSCC-CCSSEEEEECCCGGGGTSCEEEEEESTTSSSTTCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETT
T ss_pred cEEEcCCCC-CCCCEEEEEEeCCCCCCceEEEEEECCCCCCCCCCcEEEeCCccEEEECcccCcccCCeEEEEEEEEECC
Confidence 468999998 99999999999999999999999998642 2347899999998 479999988
Q ss_pred C--CeeEEEEEEEEEeCCCCCCEEecCceEEEEeCCCC-CcEEEEEEEEeCCC--CCCcEEEEEeCCC-------CCEEE
Q psy5886 81 G--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE--GQNAVVYYSVPED-------IPFVV 148 (184)
Q Consensus 81 ~--~~~~~~v~I~V~d~ND~~P~f~~~~~~~~v~e~~~-g~~v~~v~a~D~D~--~~n~~i~y~l~~~-------~~F~I 148 (184)
. +++++.|.|+|.|+|||+|.|.+..|.+.|+|+++ |+.|++|.|+|+|. +.|+.++|+|..+ ..|.|
T Consensus 85 ~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~I 164 (215)
T 2qvi_A 85 GNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTI 164 (215)
T ss_dssp TCCCEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSCCTTCEEEECCCBCSSCTTSTTTCCCCEEEECSSCCSSTTCEEE
T ss_pred CCceeeeEEEEEEEeECCCCCCcccCceeEEEEeCCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCeEEE
Confidence 4 67899999999999999999999999999999996 99999999999999 6899999999754 46999
Q ss_pred ECCCcEEEeC-ccCCccCCCeEEEEEEEEeCCCC
Q psy5886 149 DANTGDIRTN-KALDYEKQQLYLERVFLISKFAT 181 (184)
Q Consensus 149 d~~tG~i~~~-~~LD~E~~~~y~l~V~a~D~~~~ 181 (184)
++.+|.|++. +.||||....|.|.|+|+|+.+.
T Consensus 165 d~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~~ 198 (215)
T 2qvi_A 165 NNETGDIITVAAGLDREKVQQYTLIIQATDMEGN 198 (215)
T ss_dssp CTTTCEEEECSCCCCTTTCSEEEEEEECCTTTTC
T ss_pred cCCCcEEEEecCCCCcccCCeEEEEEEEEECCCC
Confidence 9999999995 89999999999999999998764
No 6
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=100.00 E-value=7.5e-33 Score=210.82 Aligned_cols=156 Identities=26% Similarity=0.295 Sum_probs=140.8
Q ss_pred EEEEEeCCCCCC--cEEEEEEEEeCCCCCCcEEEEEEecCCCCCcccEEEcCCCC-----------------eEEEEEeC
Q psy5886 19 YGAMARDKHELG--VTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE-----------------HQGPIQDE 79 (184)
Q Consensus 19 y~~~v~E~~~~g--t~v~~v~a~D~D~~~n~~~~y~i~~~~~~~~~~F~id~~tg-----------------~~v~a~d~ 79 (184)
..+.|+||.+.| +.|+++. +|+|.|.| +|+|.+++. .++|.|++.+| +.|.|.|.
T Consensus 5 ~~~~V~En~~~~~~~~v~~v~-~D~D~g~~---~Y~i~~~~~--~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~ 78 (203)
T 3ppe_A 5 NRMHIREEIDSPLPHHVGKLT-SSVGNKNA---MYIIEGESA--NTIFKVQGYDGDIYAFERLDREKKAEYELTAHIIDR 78 (203)
T ss_dssp SEEEEETTCCSSSCEEEEECC-BCCCCTTE---EEEEEETTB--TTTEEEETTTTEEEESSCCCTTTCCEEEEEEEEEET
T ss_pred ccEEEEccCCCCCCEEEEEEE-ecCCCCCc---EEEEecCCC--CCeEEEECCcCEEEECccccccccceEEEEEEEEEC
Confidence 457899999988 8899998 99998876 999998744 36899999998 47999998
Q ss_pred CC---CeeEEEEEEEEEeCCCCCCEEecCceEEEEeCCCC-CcEEEEEEEEeCC---CCCCcEEEEEeCCC-CCEEEECC
Q psy5886 80 GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD---EGQNAVVYYSVPED-IPFVVDAN 151 (184)
Q Consensus 80 ~~---~~~~~~v~I~V~d~ND~~P~f~~~~~~~~v~e~~~-g~~v~~v~a~D~D---~~~n~~i~y~l~~~-~~F~Id~~ 151 (184)
+. +++++.|.|.|.|+|||+|.|.+..|.+.|+|+++ |+.|++|.|+|+| .|.|+.++|+|..+ ..|.|+ .
T Consensus 79 g~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~~~F~I~-~ 157 (203)
T 3ppe_A 79 RNNRSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHATVTYQIIKGNEYFTVD-D 157 (203)
T ss_dssp TTTEECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTSSSTTCEEEEEEESTTTEEEC-T
T ss_pred CCCCcccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEEEEEEEEcCCCcCCCCceEEEEEEeCCCCcEEEe-C
Confidence 83 67889999999999999999999999999999996 9999999999999 47789999999764 579999 9
Q ss_pred CcEEEeC-ccCCccCCCeEEEEEEEEeCCCC
Q psy5886 152 TGDIRTN-KALDYEKQQLYLERVFLISKFAT 181 (184)
Q Consensus 152 tG~i~~~-~~LD~E~~~~y~l~V~a~D~~~~ 181 (184)
+|.|++. +.||||....|.|.|+|+|+.|.
T Consensus 158 tG~i~~~~~~LD~E~~~~y~l~V~A~D~~G~ 188 (203)
T 3ppe_A 158 SGVIFTARADLDRESQSAYEIIVKAKDALGL 188 (203)
T ss_dssp TSEEEESCSCCCTTTCSEEEEEEEEEETTCC
T ss_pred CeEEEECCcCCCcccCCEEEEEEEEEeCCCC
Confidence 9999999 99999999999999999998553
No 7
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=100.00 E-value=2.9e-33 Score=214.55 Aligned_cols=160 Identities=28% Similarity=0.354 Sum_probs=141.7
Q ss_pred EEEEEeCCCC--CCcEEEEEEEEeCCCCCCcEEEEEEecCCCC--CcccEEEcCCCC-----------------eEEEEE
Q psy5886 19 YGAMARDKHE--LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD--AASYFNLDPATE-----------------HQGPIQ 77 (184)
Q Consensus 19 y~~~v~E~~~--~gt~v~~v~a~D~D~~~n~~~~y~i~~~~~~--~~~~F~id~~tg-----------------~~v~a~ 77 (184)
..++|+||.+ .|+.|+++.| |.|. |+.++|+|.+++.+ ..++|.|++.+| +.|.|+
T Consensus 5 ~~~~V~En~~~~~~~~v~~v~a-D~d~--n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~ 81 (213)
T 3qrb_A 5 AAISCPENEKGEFPKNLVQIKS-NRDK--ETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAV 81 (213)
T ss_dssp EEEEEETTCCSSSSEEEEECCC-GGGG--TSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEE
T ss_pred CCEEEeCCCCCCCCcEEEEEEE-CCCC--CceEEEEEEcCCCCCCCCCeEEEECCCCEEEECCccCcccCceEEEEEEEE
Confidence 4689999998 6888999999 7764 88999999985432 235899999998 478999
Q ss_pred eCCC--CeeEEEEEEEEEeCCCCCCEEecCceEEEEeCCCC-CcEEEEEEEEeCCCC---CCcEEEEEeCCC-------C
Q psy5886 78 DEGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEG---QNAVVYYSVPED-------I 144 (184)
Q Consensus 78 d~~~--~~~~~~v~I~V~d~ND~~P~f~~~~~~~~v~e~~~-g~~v~~v~a~D~D~~---~n~~i~y~l~~~-------~ 144 (184)
|.++ +++++.|.|.|.|+|||+|.|.+..|.+.|+|+++ |+.|++|.|+|+|.+ .|+.++|+|..+ .
T Consensus 82 D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~~~~n~~i~Y~i~~~~~~~~~~~ 161 (213)
T 3qrb_A 82 SSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKN 161 (213)
T ss_dssp ETTSCBCSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTTSSTTCCEEEEEEEESCCSCSC
T ss_pred eCCCCcccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCCcEEEEEEEEeCCCCCCCcCcEEEEEEccCCCCCCcCC
Confidence 9875 67889999999999999999999999999999996 999999999999998 899999999653 4
Q ss_pred CEEEECCCcEEEeC-ccCCccCCCeEEEEEEEEeCCCC
Q psy5886 145 PFVVDANTGDIRTN-KALDYEKQQLYLERVFLISKFAT 181 (184)
Q Consensus 145 ~F~Id~~tG~i~~~-~~LD~E~~~~y~l~V~a~D~~~~ 181 (184)
.|.|++.+|.|++. +.||||....|.|.|+|+|+.+.
T Consensus 162 ~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~g~~ 199 (213)
T 3qrb_A 162 MFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGE 199 (213)
T ss_dssp SEEECTTTCEEEECSSCCCTTTCCEEEEEEEEETGGGT
T ss_pred eEEEECCCcEEEEccCCCCCccCceEEEEEEEEeCCCC
Confidence 79999999999997 89999999999999999997643
No 8
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=100.00 E-value=5.2e-34 Score=217.81 Aligned_cols=157 Identities=27% Similarity=0.354 Sum_probs=135.1
Q ss_pred EEEEeCCCCCC--cEEEEEEEEeCCCCCCcEEEEEEecCCCCCcccEEEcCCCC-----------------eEEEEEeCC
Q psy5886 20 GAMARDKHELG--VTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE-----------------HQGPIQDEG 80 (184)
Q Consensus 20 ~~~v~E~~~~g--t~v~~v~a~D~D~~~n~~~~y~i~~~~~~~~~~F~id~~tg-----------------~~v~a~d~~ 80 (184)
.+.|.||.+.| +.|+++ |+|+|.| |+.++|+|.+++. ..+|.|++.+| +.|.|+|.+
T Consensus 6 ~~~v~En~~~~~~~~v~~~-a~D~D~g-~~~i~Y~l~~~~~--~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~ 81 (207)
T 3lnd_A 6 QFFLLEEYTGSDYQYVGKL-HSDQDRG-DGSLKYILSGDGA--GDLFIINENTGDIQATKRLDREEKPVYILRAQAVNRR 81 (207)
T ss_dssp CEEEESCBCSSSCEEEEEC-CCTTCCS-STTBCCCCCSSSB--TTTEEECTTTCEEEECSCCCGGGCCEEEC----CBSS
T ss_pred ccEEEeecCCCCCEEEEEE-EeCCCCC-CceEEEEEECCCC--CCeEEEECCceEEEECCCcCcccCCEEEEEEEEEECC
Confidence 46789999855 589999 9999998 6789999987643 36899999999 468999976
Q ss_pred C---CeeEEEEEEEEEeCCCCCCEEecCceEEEEeCCCC-CcEEEEEEEEeCCC---CCCcEEEEEeCCC-CCEEEECCC
Q psy5886 81 G---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPED-IPFVVDANT 152 (184)
Q Consensus 81 ~---~~~~~~v~I~V~d~ND~~P~f~~~~~~~~v~e~~~-g~~v~~v~a~D~D~---~~n~~i~y~l~~~-~~F~Id~~t 152 (184)
. +++++.|.|.|.|+|||+|.|.+..|.+.|+|+++ |+.|+++.|+|+|. |.|+.++|+|..+ ..|.|++.+
T Consensus 82 ~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~~~F~Id~~t 161 (207)
T 3lnd_A 82 TGRPVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQPYFSVESET 161 (207)
T ss_dssp SCCCCSCCCCCEEEEECCSCCCCEESCSEEEEEEESSCCTTCEEEECCEECSSCTTSSSTTCCEEEEEESGGGEEECTTT
T ss_pred CCCccccEEEEEEEECccCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCCCcEEEEEEcCCCCCEEEcCCC
Confidence 2 67889999999999999999999999999999996 99999999999998 7888999999875 579999999
Q ss_pred cEEEeC-ccCCccCCCeEEEEEEEEeCCC
Q psy5886 153 GDIRTN-KALDYEKQQLYLERVFLISKFA 180 (184)
Q Consensus 153 G~i~~~-~~LD~E~~~~y~l~V~a~D~~~ 180 (184)
|.|++. +.||||....|.|.|+|+|+.+
T Consensus 162 G~i~~~~~~lD~E~~~~y~l~V~A~D~g~ 190 (207)
T 3lnd_A 162 GIIKTALLNMDRENREQYQVVIQAKDMGG 190 (207)
T ss_dssp CEEEECCSSCCC--CCEEEEEEEEESGGG
T ss_pred cEEEECcccCCcccCCEEEEEEEEEECCC
Confidence 999999 9999999999999999999864
No 9
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=100.00 E-value=8.1e-32 Score=217.69 Aligned_cols=151 Identities=19% Similarity=0.341 Sum_probs=137.2
Q ss_pred EEEEEeCCCCCCcEEEEEEEEeCCCCCCcEEEEEEecCCCCCcccEEEcCCCC-----------------eEEEEEeCCC
Q psy5886 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE-----------------HQGPIQDEGG 81 (184)
Q Consensus 19 y~~~v~E~~~~gt~v~~v~a~D~D~~~n~~~~y~i~~~~~~~~~~F~id~~tg-----------------~~v~a~d~~~ 81 (184)
|.+.|+|++++|+.|+++.|+|+|.|.| ++|+|..++. .+.|.|++.+| +.|+|+|.|+
T Consensus 113 y~~~v~En~~~gt~v~~v~A~D~D~g~n--i~Y~i~~~~~--~~~F~Id~~tG~i~~~~~lD~e~~~~y~l~V~A~D~g~ 188 (316)
T 3ubf_A 113 MQAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVRDRT--GGRFEVDERSGVVRTRGTDLFQLDMEYVLYVKAEDQNG 188 (316)
T ss_dssp EEEEECTTCCTTCEEEECCEECSSTTCC--EEEEEEEEES--SSCEEECTTTCEEEECSSCCCCTTCEEEEEEEEEESCC
T ss_pred EEEEEeCCCCCCCEEEEEEEECCCCCCc--eEEEEEeCCC--CCEEEEECCccEEEECCcCCcccCcEEEEEEEEEeCCC
Confidence 9999999999999999999999999987 9999987633 47899999998 4799999873
Q ss_pred ------CeeEEEEEEEEEeCCCCCCEEecCceEEEEeCCCC-CcEEEEEEEEeCCCCCCcEEEEEeC-C---CCCEEEEC
Q psy5886 82 ------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVP-E---DIPFVVDA 150 (184)
Q Consensus 82 ------~~~~~~v~I~V~d~ND~~P~f~~~~~~~~v~e~~~-g~~v~~v~a~D~D~~~n~~i~y~l~-~---~~~F~Id~ 150 (184)
+++++.+.|.|.| |||+|.|.+..|.+.|+|+.+ |+.|++|.|+|+| |+.++|+|. . ..+|.|++
T Consensus 189 ~~~~~~~~~~~~v~I~V~d-nDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D---n~~i~Y~i~~~~~~~~~F~Id~ 264 (316)
T 3ubf_A 189 KVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFA---DREIRYTLKAQGQGAGTFNIGP 264 (316)
T ss_dssp -------CBCCCEEEEEEE-SCCCCEESSSSEEEEEETTCCTTCEEEECCEECTT---CCCEEEEEEEESSCTTTEEECT
T ss_pred CCCCccccceEEEEEEEEc-CCCCCEEcCCCceEEEeCCCCCCCEEEEEEEEeCC---CCEEEEEEEcCCCCCCeEEEEC
Confidence 5778899999999 999999999999999999996 9999999999998 578999996 2 36799999
Q ss_pred CCcEEEeCccCCccCC---CeEEEEEEEEe
Q psy5886 151 NTGDIRTNKALDYEKQ---QLYLERVFLIS 177 (184)
Q Consensus 151 ~tG~i~~~~~LD~E~~---~~y~l~V~a~D 177 (184)
.+|.|++.+.||||.. ..|+|+|+|+|
T Consensus 265 ~tG~i~~~~~LD~E~~~~~~~y~l~V~A~d 294 (316)
T 3ubf_A 265 TSGIVKLAKELDFEDLRQPHVYSLIVTATE 294 (316)
T ss_dssp TTCEEEECSCCCSSCTTSCSEEEEEEEEEE
T ss_pred CeEEEEECCcCCccccCCCceEEEEEEEEE
Confidence 9999999999999998 79999999995
No 10
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=100.00 E-value=1.5e-31 Score=223.64 Aligned_cols=165 Identities=29% Similarity=0.384 Sum_probs=145.9
Q ss_pred CCCCCceEEEEEeCCCCCCcEEEEEEEEeCCCCCCcEEEEEEecCCCCCcccEEEcCCCC--------------------
Q psy5886 12 MTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE-------------------- 71 (184)
Q Consensus 12 ~~~~~~~y~~~v~E~~~~gt~v~~v~a~D~D~~~n~~~~y~i~~~~~~~~~~F~id~~tg-------------------- 71 (184)
+.+.+..|.+.|+||+++|+.|+++.|+|+| |+.++|+|.... +..++|.|++.+|
T Consensus 217 P~F~~~~y~~~v~En~~~gt~v~~v~A~D~d---n~~i~Ysi~~~~-~~~~~F~I~~~tG~i~~~~~LD~E~~~~~~~y~ 292 (419)
T 3ubh_A 217 PQFYMPSYEAEIPENQKKDSDIISIKAKSFA---DREIRYTLKAQG-QGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYS 292 (419)
T ss_dssp CEESSSCEEEEEETTCCTTCEEEECCEECSS---CCCCEEEEEESS-SCCSSEEECTTTCEEEECSCCCTTCTTSCSEEE
T ss_pred CceecCeeEEEecCCCCCCcEEEEEEEecCC---CCceEEEEecCC-CCCCcEEEECCCCEEEECcccCccccccccEEE
Confidence 3445669999999999999999999999987 678999998421 2347899999988
Q ss_pred eEEEEEe-CCCCeeEEEEEEEEEeCCCCCCEEecCceEE-EEeCCCC-CcEEEEEEEEeCCCCCCcEEEEEeCCCCCEEE
Q psy5886 72 HQGPIQD-EGGLSSTATVNIRVTDINDKNPEFQSLPYEF-SVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDIPFVV 148 (184)
Q Consensus 72 ~~v~a~d-~~~~~~~~~v~I~V~d~ND~~P~f~~~~~~~-~v~e~~~-g~~v~~v~a~D~D~~~n~~i~y~l~~~~~F~I 148 (184)
+.|.|+| .++++++++|.|.|.|+|||+|.|....|.. .|+|+.+ |+.|++|.|+|+|.|.|+.++|+|.. ++|.|
T Consensus 293 l~V~a~dd~~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~-~~F~I 371 (419)
T 3ubh_A 293 LIVTATEDSGGFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDIPLGTSILRVKAMDSDSGSNAEIEYLVSD-DHFAV 371 (419)
T ss_dssp EEEEEECTTTSCEEEEEEEEEEECCCCCCCEESSSEEEEEEEETTCCTTCEEEECCEECSSCGGGGCEEEEESC-TTEEE
T ss_pred EEEEEEeCCCCcEEEEEEEEEEEccCCCCCcccCCcceeEEecCCCCCCCEEEEEEEEeCCCCCCCEEEEEEcC-CcEEE
Confidence 3688884 5678999999999999999999999999987 7999996 99999999999999999999999975 58999
Q ss_pred ECCCcEEEeCccCCccC-CCeEEEEEEEEeCCCCC
Q psy5886 149 DANTGDIRTNKALDYEK-QQLYLERVFLISKFATS 182 (184)
Q Consensus 149 d~~tG~i~~~~~LD~E~-~~~y~l~V~a~D~~~~s 182 (184)
++ +|.|++.+.||||. ...|+|.|.|+|+...+
T Consensus 372 d~-~G~i~~~~~ld~E~~~~~y~l~V~a~D~G~p~ 405 (419)
T 3ubh_A 372 DS-NGIIVNNKQLDADNNNAYYEFIVTAKDKGEPP 405 (419)
T ss_dssp CT-TCEEEECSCSSSSCTTCEEEEEEEEEECCSSC
T ss_pred CC-CeEEEECcccCcccCCceEEEEEEEEECCcCC
Confidence 97 89999999999998 68999999999997653
No 11
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=100.00 E-value=2.8e-32 Score=209.71 Aligned_cols=156 Identities=26% Similarity=0.343 Sum_probs=139.0
Q ss_pred EEEEeCCCCCC--cEEEEEEEEeCCCCCCcEEEEEEecCC--CCCcccEEEcCCCC-----------------eEEEEEe
Q psy5886 20 GAMARDKHELG--VTLMQVKATDKDSGKFGLVEYRLLDNN--TDAASYFNLDPATE-----------------HQGPIQD 78 (184)
Q Consensus 20 ~~~v~E~~~~g--t~v~~v~a~D~D~~~n~~~~y~i~~~~--~~~~~~F~id~~tg-----------------~~v~a~d 78 (184)
.+.|+||.++| +.|+++.|+|+|. .++|+|.+.+ .+..+.|.|++.+| +.|.|+|
T Consensus 7 ~~~V~En~~~g~~~~v~~v~a~D~d~----~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D 82 (218)
T 3k5r_A 7 PILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTD 82 (218)
T ss_dssp CEEEETTCCSSCCEEEEECBCTTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEC
T ss_pred cEEEecCCCCCCCEEEEEEEecCCCc----eEEEEEEcCCCCCCCCCeEEEeCCceEEEECCcCCcccCCEEEEEEEEEE
Confidence 57899999998 8899999998885 5899998642 23357899999998 4799999
Q ss_pred CCC--CeeEEEEEEEEEeCCCCCCEEecCceEEEEeCCCC-CcEEEEEEEEeCCC--CCCcEEEEEeCCC-------CCE
Q psy5886 79 EGG--LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE--GQNAVVYYSVPED-------IPF 146 (184)
Q Consensus 79 ~~~--~~~~~~v~I~V~d~ND~~P~f~~~~~~~~v~e~~~-g~~v~~v~a~D~D~--~~n~~i~y~l~~~-------~~F 146 (184)
.++ +++++.|.|.|.|+|||+|.|.+..|.+.|+|+++ |+.|++|.|+|+|. +.|+.++|+|..+ ..|
T Consensus 83 ~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F 162 (218)
T 3k5r_A 83 ASGKTLEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTTVMRMTAFDADDPATDNALLRYNIRQQTPDKPSPNMF 162 (218)
T ss_dssp SSSCEEEEEEEEEEEEECTTCCCCCCCSCSEEEEEETTCCTTCEEEECCCSCSSSSCGGGGCEEEEEEEEESCCSCSCSE
T ss_pred CCCCceeeeEEEEEEEEeCCCCCCcccCCceEEEEECCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCEE
Confidence 875 67889999999999999999999999999999996 99999999999999 6899999999753 459
Q ss_pred EEECCCcEEEeC---ccCCccC--CCeEEEEEEEEeCC
Q psy5886 147 VVDANTGDIRTN---KALDYEK--QQLYLERVFLISKF 179 (184)
Q Consensus 147 ~Id~~tG~i~~~---~~LD~E~--~~~y~l~V~a~D~~ 179 (184)
.||+.+|.|++. +.||||. ...|.|.|+|+|+.
T Consensus 163 ~Id~~tG~i~~~~~~~~LD~E~~~~~~y~l~V~a~D~g 200 (218)
T 3k5r_A 163 YIDPEKGDIVTVVSPALLDRETLENPKYELIIEAQDMA 200 (218)
T ss_dssp EECTTTCEEEECSCGGGCCGGGCSCSEEEEEEEEEECS
T ss_pred EEECCccEEEEeccCCCCCccccCCCeEEEEEEEEECC
Confidence 999999999987 7999999 67999999999987
No 12
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.98 E-value=3.1e-31 Score=206.78 Aligned_cols=164 Identities=24% Similarity=0.271 Sum_probs=138.2
Q ss_pred CCceEEEEEeCCCCCCcEEEEEEEE-eCCCCCCcEEEEEEecCCCCCcccEEEcCCCCe---------------------
Q psy5886 15 DSLFYGAMARDKHELGVTLMQVKAT-DKDSGKFGLVEYRLLDNNTDAASYFNLDPATEH--------------------- 72 (184)
Q Consensus 15 ~~~~y~~~v~E~~~~gt~v~~v~a~-D~D~~~n~~~~y~i~~~~~~~~~~F~id~~tg~--------------------- 72 (184)
.++.|.+.|+|++++|+.|+.+.+. |.|.+.|+.++|+|.+.. ..+|.+++.+|.
T Consensus 18 gPP~~~vsV~E~sp~GTvv~~~~~~~~~d~~~n~~i~ysl~~~~---~~~f~id~~tg~~~l~~t~~~LDrE~~~~~~~~ 94 (242)
T 4apx_B 18 GPPATIVAIDEESRNGTILVDNMLIKGTAGGPDPTIELSLKDNV---DYWVLLDPVKQMLFLNSTGRVLDRDPPMNIHSI 94 (242)
T ss_dssp SCSSEEEEEETTCCTTCEEESCCCBSSCBSSSSCSEEEEEESCG---GGCEEEETTTTEEEECCTTSCCCCSTTTCCCEE
T ss_pred CCCeEEEEeeCCCCCCCEEEEEEEecCCCCCCCCEEEEEEecCC---CceEEECCCCCEEEEEecCCceeccCCCceEEE
Confidence 3457889999999999999876555 555677899999998753 367999988872
Q ss_pred --EEEEEeCC-CCeeEEEEEEEEEeCCCCCCEEecCceEEEEeCCCC-CcEEEE-----EEEEeCCCCCCcEEEEEeCCC
Q psy5886 73 --QGPIQDEG-GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGR-----VHATDADEGQNAVVYYSVPED 143 (184)
Q Consensus 73 --~v~a~d~~-~~~~~~~v~I~V~d~ND~~P~f~~~~~~~~v~e~~~-g~~v~~-----v~a~D~D~~~n~~i~y~l~~~ 143 (184)
.+.+.+.+ +..+.+.|.|.|.|+|||+|.|.+..|.+.|+|+++ |+.|++ |.|+|+|.|.|+.|+|+|..+
T Consensus 95 ~~~v~~~~~~~~~~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~~~~~~v~A~D~D~g~N~~v~Ysi~~~ 174 (242)
T 4apx_B 95 VVQVQCVNKKVGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYN 174 (242)
T ss_dssp EEEEEEEETTTCCEEEEEEEEEEECCCCCCCEESSSCEEEEEETTCCTTCEEECTTTTTTSEECCSSGGGGCEEEEEECC
T ss_pred EEEEEeECCCCCeEEEEEEEEEEEeCCCCCCcccceeeeeEeeeccCCCCEEEEeeecccccccCCCCcCCceEEEEecC
Confidence 23444543 356678899999999999999999999999999996 999976 789999999999999999865
Q ss_pred C-------CEEEEC-CCcEEEeCccCCccCCCeEEEEEEEEeCCCC
Q psy5886 144 I-------PFVVDA-NTGDIRTNKALDYEKQQLYLERVFLISKFAT 181 (184)
Q Consensus 144 ~-------~F~Id~-~tG~i~~~~~LD~E~~~~y~l~V~a~D~~~~ 181 (184)
. .|.||. .||.|++.+.||||....|.|.|+|+|+.+.
T Consensus 175 ~~~~~~~~~F~Id~~~tG~i~~~~~LD~E~~~~y~l~V~A~D~G~~ 220 (242)
T 4apx_B 175 PEDPTSNDTFEIPLMLTGNVVLRKRLNYEDKTRYYVIIQANDRAQN 220 (242)
T ss_dssp TTSTTHHHHEECSSTTTCCEEECSCCCTTTCCEEEEEEEEEECCSS
T ss_pred CCCcccccceEEcCCCceEEEECCcCChhhCCEEEEEEEEEECCcC
Confidence 2 399985 5999999999999999999999999998764
No 13
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=99.97 E-value=1.9e-31 Score=229.54 Aligned_cols=168 Identities=26% Similarity=0.391 Sum_probs=150.4
Q ss_pred CCCCCceEEEEEeCCCCCCcEEEEEEEEeCCCC---CCcEEEEEEecCCCC--CcccEEEcCCCC---------------
Q psy5886 12 MTSDSLFYGAMARDKHELGVTLMQVKATDKDSG---KFGLVEYRLLDNNTD--AASYFNLDPATE--------------- 71 (184)
Q Consensus 12 ~~~~~~~y~~~v~E~~~~gt~v~~v~a~D~D~~---~n~~~~y~i~~~~~~--~~~~F~id~~tg--------------- 71 (184)
+.+.+..|.+.|+|++++|+.|+++.|+|+|.| .|+.++|+|.++.+. ..+.|.|++.+|
T Consensus 112 P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~g~~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~ 191 (546)
T 1l3w_A 112 PKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFP 191 (546)
T ss_dssp CEESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTCC
T ss_pred CEecCceeEEEEECCCCCCCEEEEEEEEcCCCCCCCCCCEEEEEEeCCCCCcccCCcEEEeCCCceEEEeccCCCcccCc
Confidence 344556899999999999999999999999998 689999999987532 347899999988
Q ss_pred ---eEEEEEeCC--CCeeEEEEEEEEEeCCCCCCEEecCceEEEEeCCCC-CcEEEEEEEEeCC--CCCCcEEEEEeCC-
Q psy5886 72 ---HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD--EGQNAVVYYSVPE- 142 (184)
Q Consensus 72 ---~~v~a~d~~--~~~~~~~v~I~V~d~ND~~P~f~~~~~~~~v~e~~~-g~~v~~v~a~D~D--~~~n~~i~y~l~~- 142 (184)
+.|+|+|.| +++++++|.|.|.|+|||+|.|.+..|.+.|+|+ + |+.|+++.|+|+| .+.|+.++|+|..
T Consensus 192 ~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~v~~v~A~D~D~~~g~n~~v~y~i~~~ 270 (546)
T 1l3w_A 192 EYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVN 270 (546)
T ss_dssp EEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSCC
T ss_pred eEEEEEEEEECCCCCcceEEEEEEEEeecCCCCCccccccceEEEEeC-CCCCEEEEEEEEeCCCCCCCCcEEEEEEEeC
Confidence 478999977 5899999999999999999999999999999999 6 9999999999999 6789999999985
Q ss_pred -CCCEEEE----CCCcEEEeCccCCccCCCeEEEEEEEEeCCC
Q psy5886 143 -DIPFVVD----ANTGDIRTNKALDYEKQQLYLERVFLISKFA 180 (184)
Q Consensus 143 -~~~F~Id----~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~~ 180 (184)
...|.|+ ..+|.|++.++||||....|.|+|+|+|+.+
T Consensus 271 ~~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V~a~D~~~ 313 (546)
T 1l3w_A 271 EGGFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENAEP 313 (546)
T ss_dssp TTSCEEEEECTTTCCEEEEESSCCCCSSCCCEEEEECCEESSC
T ss_pred CCceEEEEecCCCCeEEEEECccCCcccccEEEEEEEEEECCC
Confidence 4579996 3689999999999999999999999999763
No 14
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=99.97 E-value=6.7e-31 Score=226.39 Aligned_cols=169 Identities=28% Similarity=0.397 Sum_probs=150.8
Q ss_pred CCCCCceEEEEEeCCCCCCcEEEEEEEEeCCCC---CCcEEEEEEecCCCC--CcccEEEcCCCC---------------
Q psy5886 12 MTSDSLFYGAMARDKHELGVTLMQVKATDKDSG---KFGLVEYRLLDNNTD--AASYFNLDPATE--------------- 71 (184)
Q Consensus 12 ~~~~~~~y~~~v~E~~~~gt~v~~v~a~D~D~~---~n~~~~y~i~~~~~~--~~~~F~id~~tg--------------- 71 (184)
+.+.+..|.++|+|++++|+.|+++.|+|+|.| .|+.++|+|.++++. ..+.|.|++.+|
T Consensus 106 P~F~~~~y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~N~~i~Ysi~~~~~~~~~~~~F~id~~tG~i~~~~~~LDrE~~~ 185 (550)
T 3q2v_A 106 PEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYP 185 (550)
T ss_dssp CCBSCSEEEEEEETTCCTTCEEEECCBCCCSCTTTCGGGCCEEEEEEEESCCSSSCSEEECTTTCEEEECSSCCCTTTCS
T ss_pred CccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCcceEEEEEEecCCCCCCcCCceEEcCCCeEEEEccCCCCcccCc
Confidence 344567999999999999999999999999998 799999999886542 346899999998
Q ss_pred ---eEEEEEeCC--CCeeEEEEEEEEEeCCCCCCEEecCceEEEEeCCCCCcEEEEEEEEeCCCCCCc--EEEEEeCC--
Q psy5886 72 ---HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNA--VVYYSVPE-- 142 (184)
Q Consensus 72 ---~~v~a~d~~--~~~~~~~v~I~V~d~ND~~P~f~~~~~~~~v~e~~~g~~v~~v~a~D~D~~~n~--~i~y~l~~-- 142 (184)
+.|+|+|.| +++++++|.|.|.|+|||+|.|.+..|.+.|+|+.+|+.|+++.|+|+|.+.|+ .++|+|..
T Consensus 186 ~y~l~V~A~D~g~~~~s~t~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~g~~v~~v~a~D~D~~~n~~~~~~ysi~~~~ 265 (550)
T 3q2v_A 186 TYTLVVQAADLQGEGLSTTAKAVITVKDINDNAPVFNPSTYQGQVPENEVNARIATLKVTDDDAPNTPAWKAVYTVVNDP 265 (550)
T ss_dssp EEEEEEEEESGGGTSCCCEEEEEEEEECCSCSCCEESSSEEEEEEESSCSSCCCEEECEECCSCTTSTTTCEEEEESSCS
T ss_pred EEEEEEEEEcCCCCCeeEEEEEEEEecccCCCCCEEecceeEEEEecCCCCCEEEEEEEEECCCCCCCcEEEEEEEEeCC
Confidence 479999965 589999999999999999999999999999999944999999999999999776 56799975
Q ss_pred CCCEEEE----CCCcEEEeCccCCccCCCeEEEEEEEEeCCC
Q psy5886 143 DIPFVVD----ANTGDIRTNKALDYEKQQLYLERVFLISKFA 180 (184)
Q Consensus 143 ~~~F~Id----~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~~ 180 (184)
...|.|+ ..+|.|++.+.||||....|.|+|+|+|+.+
T Consensus 266 ~~~F~i~~d~~~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~~ 307 (550)
T 3q2v_A 266 DQQFVVVTDPTTNDGILKTAKGLDFEAKQQYILHVRVENEEP 307 (550)
T ss_dssp SCCEEEEECTTTCCEEEEESSCCCTTTCSEEEEEEEEEESSC
T ss_pred CCcEEEEecCCCccEEEEecccCCccccceEEEEEEEEeCCC
Confidence 4679998 7899999999999999999999999999863
No 15
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=99.97 E-value=2.3e-31 Score=229.63 Aligned_cols=168 Identities=26% Similarity=0.388 Sum_probs=149.6
Q ss_pred CCCCCceEEEEEeCCCCCCcEEEEEEEEeCCCC--CCcEEEEEEecCCCC--CcccEEEcCCCC----------------
Q psy5886 12 MTSDSLFYGAMARDKHELGVTLMQVKATDKDSG--KFGLVEYRLLDNNTD--AASYFNLDPATE---------------- 71 (184)
Q Consensus 12 ~~~~~~~y~~~v~E~~~~gt~v~~v~a~D~D~~--~n~~~~y~i~~~~~~--~~~~F~id~~tg---------------- 71 (184)
+.+.+..|.++|+||+++|+.|+++.|+|+|.| .|+.++|+|.++.+. ..+.|.|++.+|
T Consensus 106 P~F~~~~y~~~V~En~~~Gt~v~~v~A~D~D~g~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~ 185 (559)
T 3q2w_A 106 PEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQ 185 (559)
T ss_dssp CEESCSEEEEEEETTCCTTCEEEECCEECSSCTTSGGGCCEEEEEEEESCCSCTTCEEECTTTCEEEECCSCCCTTTCCE
T ss_pred CccCCCeeEEEEeCCCCCCcEEEEEEEEcCCCCCCCceEEEEEEecCCCCCCCcceEEEeCCceEEEEEeccCCcccCCE
Confidence 344567999999999999999999999999997 589999999876432 126799999998
Q ss_pred --eEEEEEeCC-----CCeeEEEEEEEEEeCCCCCCEEecCceEEEEeCCCCCcEEEEEEEEeCCCCC--CcEEEEEeCC
Q psy5886 72 --HQGPIQDEG-----GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQ--NAVVYYSVPE 142 (184)
Q Consensus 72 --~~v~a~d~~-----~~~~~~~v~I~V~d~ND~~P~f~~~~~~~~v~e~~~g~~v~~v~a~D~D~~~--n~~i~y~l~~ 142 (184)
+.|+|+|.+ +++++++|.|.|.|+|||+|.|.+..|.+.|+|+.+|+.|+++.|+|+|.+. |+.++|+|..
T Consensus 186 y~l~V~A~D~~g~p~~~~s~t~~v~I~V~DvNDn~P~f~~~~y~~~V~En~~g~~v~~v~a~D~D~~~~~n~~~~y~i~~ 265 (559)
T 3q2w_A 186 YTLIIQATDMEGNPTYGLSNTATAVITVTDVNDNPPEFTAMTFYGEVPENRVDVIVANLTVTDKDQPHTPAWNAAYRISG 265 (559)
T ss_dssp EEEEEEEEHHHHCTTTCCEEEEEEEEEEECCSCSCCEESSSEEEEEEESSCSSEEEEEEEEECCSCTTSTTTSBCCEEEE
T ss_pred EEEEEEEEECCCCCCCCccceEEEEEEEEeCCCCCCccccccceeEecCCCCCcEEEEEEEEcCCCCCCCceeEEEEEec
Confidence 478999974 3789999999999999999999999999999999889999999999999985 6689999975
Q ss_pred C---CCEEE----ECCCcEEEeCccCCccCCCeEEEEEEEEeCC
Q psy5886 143 D---IPFVV----DANTGDIRTNKALDYEKQQLYLERVFLISKF 179 (184)
Q Consensus 143 ~---~~F~I----d~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~ 179 (184)
+ ..|.| +..+|.|++.++||||....|+|+|.|+|+.
T Consensus 266 g~~~~~F~I~~~~~~~~G~i~~~~~LD~E~~~~y~l~V~A~D~~ 309 (559)
T 3q2w_A 266 GDPTGRFAILTDPNSNDGLVTVVKPIDFETNRMFVLTVAAENQV 309 (559)
T ss_dssp SCTTCCEEEEECTTTCEEEEEECSCCCTTTCSEEEEEEECCBSS
T ss_pred CCCCCceEEEecCCCCcEEEEeCCCCCCccCceEEEEEEEEcCC
Confidence 4 57999 5789999999999999999999999999974
No 16
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=99.97 E-value=2.1e-30 Score=233.24 Aligned_cols=168 Identities=26% Similarity=0.389 Sum_probs=150.5
Q ss_pred CCCCCceEEEEEeCCCCCCcEEEEEEEEeCCCC---CCcEEEEEEecCCCC--CcccEEEcCCCC---------------
Q psy5886 12 MTSDSLFYGAMARDKHELGVTLMQVKATDKDSG---KFGLVEYRLLDNNTD--AASYFNLDPATE--------------- 71 (184)
Q Consensus 12 ~~~~~~~y~~~v~E~~~~gt~v~~v~a~D~D~~---~n~~~~y~i~~~~~~--~~~~F~id~~tg--------------- 71 (184)
+.+.+..|.++|+|++++|+.|+++.|+|+|.| .|+.++|+|.++.+. ..+.|.||+.+|
T Consensus 261 P~F~~~~y~~~V~En~~~Gt~V~~v~AtD~D~g~~~~N~~v~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~~LDrE~~~ 340 (880)
T 1q55_A 261 PKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFP 340 (880)
T ss_dssp CEESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTCC
T ss_pred CCccCCcEEEEEeCCCCCCceeEEEEEEcCCCCCCCcCcEEEEEEcCCCCCcccCCeEEEccCCccEEEecccCCHHHcc
Confidence 344566899999999999999999999999998 689999999987532 357899999998
Q ss_pred ---eEEEEEeCC--CCeeEEEEEEEEEeCCCCCCEEecCceEEEEeCCCC-CcEEEEEEEEeCC--CCCCcEEEEEeCC-
Q psy5886 72 ---HQGPIQDEG--GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDAD--EGQNAVVYYSVPE- 142 (184)
Q Consensus 72 ---~~v~a~d~~--~~~~~~~v~I~V~d~ND~~P~f~~~~~~~~v~e~~~-g~~v~~v~a~D~D--~~~n~~i~y~l~~- 142 (184)
+.|+|+|.+ +++++++|.|+|.|+|||+|.|.+..|.+.|+|+ + |+.|++|.|+|+| .+.|+.++|+|..
T Consensus 341 ~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~V~~v~A~D~D~~~g~n~~v~Ysi~~~ 419 (880)
T 1q55_A 341 EYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVN 419 (880)
T ss_dssp EEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSCC
T ss_pred eeEEEEEEEECCCCCccceeEEEEEEEeccCCCCCccccceEEEeecC-CCCcEEEEEEEECCCCCCCCCceEEEEEecC
Confidence 478999977 5899999999999999999999999999999999 6 9999999999999 6789999999985
Q ss_pred -CCCEEEE--C--CCcEEEeCccCCccCCCeEEEEEEEEeCCC
Q psy5886 143 -DIPFVVD--A--NTGDIRTNKALDYEKQQLYLERVFLISKFA 180 (184)
Q Consensus 143 -~~~F~Id--~--~tG~i~~~~~LD~E~~~~y~l~V~a~D~~~ 180 (184)
+..|.|+ + .+|.|++.++||||....|+|+|+|+|+.+
T Consensus 420 ~~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V~A~D~~~ 462 (880)
T 1q55_A 420 EGGFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENAEP 462 (880)
T ss_dssp TTSCEEEEECTTTCCEEEEESSCCCCSSCCCEEEEECCEESSC
T ss_pred CCceEEEEecCCCceEEEecccCCCcccCCcEEEEEEEEECCC
Confidence 4679995 3 689999999999999999999999999763
No 17
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=99.97 E-value=5e-31 Score=213.56 Aligned_cols=159 Identities=28% Similarity=0.374 Sum_probs=142.0
Q ss_pred EEEEEeCC--CCCCcEEEEEEEEeCCCCCCcEEEEEEecCCCCCcccEEEcCCCC-----------------eEEEEEeC
Q psy5886 19 YGAMARDK--HELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE-----------------HQGPIQDE 79 (184)
Q Consensus 19 y~~~v~E~--~~~gt~v~~v~a~D~D~~~n~~~~y~i~~~~~~~~~~F~id~~tg-----------------~~v~a~d~ 79 (184)
+.+.|.|| .+.|+.|+++. +|+|.| |+.++|+|.+++. ...|.||+.+| +.|+|+|.
T Consensus 5 ~~~~v~E~~~~~~~~~v~~va-~D~D~g-~~~i~Y~l~~~~~--~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~ 80 (322)
T 2a62_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGDGA--GTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDF 80 (322)
T ss_dssp CCEECCCSCCCSSCEECCCCC-CCCCCS-SCCCEEEEEETTB--TTTEEEETTTTEEEECSCCCTTTCSBCCEEEEEECT
T ss_pred ceeeeccccCCCCCEEEEEEE-EcCCCC-CCEEEEEEECCCC--CCcEEEeCCcCEEEEeccCCcccccEEEEEEEEEEC
Confidence 45678899 88999999995 899988 6899999987632 36899999998 57999997
Q ss_pred CC---CeeEEEEEEEEEeCCCCCCEEecCceEEEEeCCCC-CcEEEEEEEEeCCC---CCCcEEEEEeCCC-CCEEEECC
Q psy5886 80 GG---LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADE---GQNAVVYYSVPED-IPFVVDAN 151 (184)
Q Consensus 80 ~~---~~~~~~v~I~V~d~ND~~P~f~~~~~~~~v~e~~~-g~~v~~v~a~D~D~---~~n~~i~y~l~~~-~~F~Id~~ 151 (184)
+. +++.+.+.|.|.|+|||+|.|.+..|.+.|+|+++ |+.|+++.|+|+|. |.|+.++|+|..+ ..|.|++.
T Consensus 81 ~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~~~F~Id~~ 160 (322)
T 2a62_A 81 ETNKPLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEGQPYFSIEPE 160 (322)
T ss_dssp TTCSEEEEEEEECEECCCCSCSCBCCSSSEEEEEECSSCCTTCBCCCCCCCBCSCSSSTTSSCEEEEEEECTTTEEECTT
T ss_pred CCCCcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCccEEEEEEEccCCCCEEEecC
Confidence 63 57789999999999999999999999999999996 99999999999996 7789999999765 57999999
Q ss_pred CcEEEeC-ccCCccCCCeEEEEEEEEeCCCC
Q psy5886 152 TGDIRTN-KALDYEKQQLYLERVFLISKFAT 181 (184)
Q Consensus 152 tG~i~~~-~~LD~E~~~~y~l~V~a~D~~~~ 181 (184)
+|.|++. +.||||....|.|.|+|+|+.+.
T Consensus 161 tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~p 191 (322)
T 2a62_A 161 TAIIKTALPNMDREAKEEYLVVIQAKDMGGH 191 (322)
T ss_dssp TCCEEECSSCCCGGGCSEEEEEEEEEESCSS
T ss_pred CCEEEecccCCCcccCCeEEEEEEEEECCCC
Confidence 9999998 99999999999999999998753
No 18
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=99.97 E-value=1.5e-29 Score=217.94 Aligned_cols=165 Identities=21% Similarity=0.292 Sum_probs=147.3
Q ss_pred CCCCCceEEEEEeCCCCCCcEEEEEEEEeCCCCCCc--EEEEEEecCCCCCcccEEEc----CCCC--------------
Q psy5886 12 MTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFG--LVEYRLLDNNTDAASYFNLD----PATE-------------- 71 (184)
Q Consensus 12 ~~~~~~~y~~~v~E~~~~gt~v~~v~a~D~D~~~n~--~~~y~i~~~~~~~~~~F~id----~~tg-------------- 71 (184)
+.+.+..|.+.|+|| ++|+.|+++.|+|+|.+.|+ .++|+|.. + ..+.|.|+ +.+|
T Consensus 219 P~F~~~~y~~~V~En-~~g~~v~~v~a~D~D~~~n~~~~~~ysi~~-~--~~~~F~i~~d~~~~tG~i~~~~~LD~E~~~ 294 (550)
T 3q2v_A 219 PVFNPSTYQGQVPEN-EVNARIATLKVTDDDAPNTPAWKAVYTVVN-D--PDQQFVVVTDPTTNDGILKTAKGLDFEAKQ 294 (550)
T ss_dssp CEESSSEEEEEEESS-CSSCCCEEECEECCSCTTSTTTCEEEEESS-C--SSCCEEEEECTTTCCEEEEESSCCCTTTCS
T ss_pred CEEecceeEEEEecC-CCCCEEEEEEEEECCCCCCCcEEEEEEEEe-C--CCCcEEEEecCCCccEEEEecccCCccccc
Confidence 344566999999999 99999999999999999877 46799987 2 34789997 5666
Q ss_pred ---eEEEEEeCCC-----CeeEEEEEEEEEeCCCCCCEEecCceEEEEeCCCC-CcEEEEEEEEeCCCCCCcEEEEEeCC
Q psy5886 72 ---HQGPIQDEGG-----LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE 142 (184)
Q Consensus 72 ---~~v~a~d~~~-----~~~~~~v~I~V~d~ND~~P~f~~~~~~~~v~e~~~-g~~v~~v~a~D~D~~~n~~i~y~l~~ 142 (184)
+.|+|+|.++ ++++++|.|.|.|+|| +|.|....|.+.|+|+++ |+.|+++.|+|+|.|.|+.++|+|..
T Consensus 295 ~y~l~V~a~D~~~~~~~~~~~~~~v~I~V~DvND-~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~i~y~i~~ 373 (550)
T 3q2v_A 295 QYILHVRVENEEPFEGSLVPSTATVTVDVVDVNE-APIFMPAERRVEVPEDFGVGQEITSYTAREPDTFMDQKITYRIWR 373 (550)
T ss_dssp EEEEEEEEEESSCCCSSCCCEEEEEEEEEECCCC-CCEESSSSCEEEEETTCCSSCEEEECCEECCCCSTTCCCEEEEEE
T ss_pred eEEEEEEEEeCCCCCCCccceEEEEEEEEEecCC-CCeEcCcceEEEEecCCCCCCEEEEEeCCCCCCCCCCCEEEEEec
Confidence 4799999763 6889999999999999 999999999999999996 99999999999999999999999965
Q ss_pred C--CCEEEECCCcEEEeCccCCccCC-----CeEEEEEEEEeCCCC
Q psy5886 143 D--IPFVVDANTGDIRTNKALDYEKQ-----QLYLERVFLISKFAT 181 (184)
Q Consensus 143 ~--~~F~Id~~tG~i~~~~~LD~E~~-----~~y~l~V~a~D~~~~ 181 (184)
+ .+|.|++.+|.|++.+.||||.. ..|+|+|.|+|+...
T Consensus 374 ~~~~~f~id~~tG~i~~~~~lDrE~~~~~~~~~y~l~V~A~D~g~p 419 (550)
T 3q2v_A 374 DTANWLEINPETGAIFTRAEMDREDAEHVKNSTYVALIIATDDGSP 419 (550)
T ss_dssp CTTCCEEECTTTCEEEECSCCCTTCTTTCCSSEEEEEEEEECCSSS
T ss_pred CCCCcEEEeCCCcEEEECCccCcccccccCCCEEEEEEEEEeCCCC
Confidence 3 67999999999999999999998 999999999998764
No 19
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=99.97 E-value=3.5e-29 Score=209.29 Aligned_cols=153 Identities=19% Similarity=0.329 Sum_probs=136.8
Q ss_pred EEEEEeCCCCCCcEEEEEEEEeCCCCCCcEEEEEEecCCCCCcccEEEcCCCC-----------------eEEEEEeCCC
Q psy5886 19 YGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE-----------------HQGPIQDEGG 81 (184)
Q Consensus 19 y~~~v~E~~~~gt~v~~v~a~D~D~~~n~~~~y~i~~~~~~~~~~F~id~~tg-----------------~~v~a~d~~~ 81 (184)
|.+.|+|++++|+.|+++.|+|+|.|.| ++|+|..++. .+.|.|++.+| +.|+|+|.++
T Consensus 118 ~~~~v~E~~~~gt~v~~v~A~D~D~g~n--~~y~i~~~~~--~~~F~I~~~tG~i~~~~~ld~e~~~~y~l~V~A~D~g~ 193 (419)
T 3ubh_A 118 MQAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVRDRT--GGRFEVDERSGVVRTRGTDLFQLDMEYVLYVKAEDQNG 193 (419)
T ss_dssp CEEEECTTCCTTCEEEECCEECSSTTCC--EEEEEEEESS--SSCEEECTTTCEEEECSSSCCCBTCEEEEEEEEEEEEE
T ss_pred EEEEEeCCCCCCCEEEEEEEECCCCCce--eEEEEEeCCC--CCeEEEeCCceEEEEecccccccccEEEEEEEEEECCC
Confidence 8999999999999999999999999987 8999987643 47899999998 4789999763
Q ss_pred ------CeeEEEEEEEEEeCCCCCCEEecCceEEEEeCCCC-CcEEEEEEEEeCCCCCCcEEEEEeCC----CCCEEEEC
Q psy5886 82 ------LSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE----DIPFVVDA 150 (184)
Q Consensus 82 ------~~~~~~v~I~V~d~ND~~P~f~~~~~~~~v~e~~~-g~~v~~v~a~D~D~~~n~~i~y~l~~----~~~F~Id~ 150 (184)
+++++.+.|.|.| |||+|.|.+..|.+.|+|+.+ |+.|++|.|+|+| |+.++|+|.. ..+|.|++
T Consensus 194 ~~~~~~~~~t~~v~I~V~d-ndn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~d---n~~i~Ysi~~~~~~~~~F~I~~ 269 (419)
T 3ubh_A 194 KVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFA---DREIRYTLKAQGQGAGTFNIGP 269 (419)
T ss_dssp EC--CCEEECCCEEEEEEE-SCCCCEESSSCEEEEEETTCCTTCEEEECCEECSS---CCCCEEEEEESSSCCSSEEECT
T ss_pred CccCcccccceEEEEEEEC-CCCCCceecCeeEEEecCCCCCCcEEEEEEEecCC---CCceEEEEecCCCCCCcEEEEC
Confidence 4778899999999 999999999999999999996 9999999999986 5789999962 36799999
Q ss_pred CCcEEEeCccCCccCCC---eEEEEEEEEeCC
Q psy5886 151 NTGDIRTNKALDYEKQQ---LYLERVFLISKF 179 (184)
Q Consensus 151 ~tG~i~~~~~LD~E~~~---~y~l~V~a~D~~ 179 (184)
.+|.|++.++||||... +|.|.|+|+|..
T Consensus 270 ~tG~i~~~~~LD~E~~~~~~~y~l~V~a~dd~ 301 (419)
T 3ubh_A 270 TSGIVKLAKELDFEDLRQPHVYSLIVTATEDS 301 (419)
T ss_dssp TTCEEEECSCCCTTCTTSCSEEEEEEEEECTT
T ss_pred CCCEEEECcccCccccccccEEEEEEEEEeCC
Confidence 99999999999999865 799999999643
No 20
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=99.97 E-value=1.5e-29 Score=217.80 Aligned_cols=163 Identities=25% Similarity=0.323 Sum_probs=145.8
Q ss_pred CCCCceEEEEEeCCCCCCcEEEEEEEEeCC--CCCCcEEEEEEecCCCCCcccEEEc--C--CCC---------------
Q psy5886 13 TSDSLFYGAMARDKHELGVTLMQVKATDKD--SGKFGLVEYRLLDNNTDAASYFNLD--P--ATE--------------- 71 (184)
Q Consensus 13 ~~~~~~y~~~v~E~~~~gt~v~~v~a~D~D--~~~n~~~~y~i~~~~~~~~~~F~id--~--~tg--------------- 71 (184)
.+.+..|.+.|+|| ++|+.|+++.|+|+| .+.|+.++|+|.+ +. .+.|.|+ + .+|
T Consensus 226 ~F~~~~y~~~V~En-~~gt~v~~v~A~D~D~~~g~n~~v~y~i~~-~~--~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~ 301 (546)
T 1l3w_A 226 IFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRV-NE--GGFFNITTDPESNQGILTTAKGLDFELRKQ 301 (546)
T ss_dssp CBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSC-CT--TSCEEEEECTTTCCEEEEESSCCCCSSCCC
T ss_pred ccccccceEEEEeC-CCCCEEEEEEEEeCCCCCCCCcEEEEEEEe-CC--CceEEEEecCCCCeEEEEECccCCcccccE
Confidence 34556899999999 999999999999999 6789999999987 33 4789995 3 355
Q ss_pred --eEEEEEeCC-----CCeeEEEEEEEEEeCCCCCCEEecCceEEEEeCCCC-CcEEEEEEEEeCCCCCCcEEEEEeCCC
Q psy5886 72 --HQGPIQDEG-----GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPED 143 (184)
Q Consensus 72 --~~v~a~d~~-----~~~~~~~v~I~V~d~ND~~P~f~~~~~~~~v~e~~~-g~~v~~v~a~D~D~~~n~~i~y~l~~~ 143 (184)
+.|+|+|.+ .++++++|.|.|.|+|| +|.|.+..|.+.|+|+.+ |+.|++|.|+|+|.+.|+.++|+|..+
T Consensus 302 y~l~V~a~D~~~~~~~~~s~~~~v~I~V~DvND-~P~f~~~~y~~~V~En~~~g~~v~~v~A~D~D~g~n~~i~ysi~~~ 380 (546)
T 1l3w_A 302 YVLQITVENAEPFSVPLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGND 380 (546)
T ss_dssp EEEEECCEESSCCSSCCCCCCEEEEEEEECCCC-CCEESSCEECCCBCTTCCSSEEEEECCEECCCTTCCCCEEEEECCC
T ss_pred EEEEEEEEECCCCCCCCcceeEEEEEEEEcCCC-CCcEecceEEEEEeCCCCCCCEEEEEEEECCCCCCCceEEEEECCC
Confidence 478999975 26889999999999999 999999999999999996 999999999999999999999999874
Q ss_pred --CCEEEECCCcEEEeCccCCccCC----CeEEEEEEEEeCCC
Q psy5886 144 --IPFVVDANTGDIRTNKALDYEKQ----QLYLERVFLISKFA 180 (184)
Q Consensus 144 --~~F~Id~~tG~i~~~~~LD~E~~----~~y~l~V~a~D~~~ 180 (184)
.+|.|++.+|.|++.+.||||.. ..|+|+|.|+|+..
T Consensus 381 ~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~V~a~D~g~ 423 (546)
T 1l3w_A 381 PARWLTVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLVTDDGV 423 (546)
T ss_dssp SSCCCEEETTTTEEEECSCCCTTSSSCCSSCCEEEEEEEECSS
T ss_pred CCCcEEEeCCcEEEEECCccCCccccCCCCEEEEEEEEEECCC
Confidence 67999999999999999999997 89999999999864
No 21
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=99.96 E-value=6.6e-29 Score=214.34 Aligned_cols=166 Identities=22% Similarity=0.274 Sum_probs=146.6
Q ss_pred CCCCCceEEEEEeCCCCCCcEEEEEEEEeCCCCC--CcEEEEEEecCCCCCcccEEE----cCCCC--------------
Q psy5886 12 MTSDSLFYGAMARDKHELGVTLMQVKATDKDSGK--FGLVEYRLLDNNTDAASYFNL----DPATE-------------- 71 (184)
Q Consensus 12 ~~~~~~~y~~~v~E~~~~gt~v~~v~a~D~D~~~--n~~~~y~i~~~~~~~~~~F~i----d~~tg-------------- 71 (184)
+.+.+..|.+.|+||. +|+.|+++.|+|+|.+. |++++|+|..++. .+.|.| ++.+|
T Consensus 221 P~f~~~~y~~~V~En~-~g~~v~~v~a~D~D~~~~~n~~~~y~i~~g~~--~~~F~I~~~~~~~~G~i~~~~~LD~E~~~ 297 (559)
T 3q2w_A 221 PEFTAMTFYGEVPENR-VDVIVANLTVTDKDQPHTPAWNAAYRISGGDP--TGRFAILTDPNSNDGLVTVVKPIDFETNR 297 (559)
T ss_dssp CEESSSEEEEEEESSC-SSEEEEEEEEECCSCTTSTTTSBCCEEEESCT--TCCEEEEECTTTCEEEEEECSCCCTTTCS
T ss_pred CccccccceeEecCCC-CCcEEEEEEEEcCCCCCCCceeEEEEEecCCC--CCceEEEecCCCCcEEEEeCCCCCCccCc
Confidence 3445669999999997 89999999999999986 6789999998754 478999 45565
Q ss_pred ---eEEEEEeCC--------CCeeEEEEEEEEEeCCCCCCEEecCceEEEEeCCCC-CcEEEEEEEEeCCCCCCcEEEEE
Q psy5886 72 ---HQGPIQDEG--------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYS 139 (184)
Q Consensus 72 ---~~v~a~d~~--------~~~~~~~v~I~V~d~ND~~P~f~~~~~~~~v~e~~~-g~~v~~v~a~D~D~~~n~~i~y~ 139 (184)
+.|.|+|.+ .++++++|.|.|.|+|| +|.|.+..|.+.|+|+.+ |+.|++|.|+|+|.+.|+.++|+
T Consensus 298 ~y~l~V~A~D~~~~~~g~~~~~~s~~~v~I~V~DvND-~P~f~~~~~~~~v~En~~~g~~v~~v~A~D~D~g~n~~i~Ys 376 (559)
T 3q2w_A 298 MFVLTVAAENQVPLAKGIQHPPQSTATVSVTVIDVNE-NPYFAPNPKIIRQEEGLHAGTMLTTLTAQDPDRYMQQNIRYT 376 (559)
T ss_dssp EEEEEEECCBSSCCCTTCCCCGGGEEEEEEEEECCCC-CCEESSSEEEEEEESCCCTTCEEEECCEECSCSSSCCCEEEE
T ss_pred eEEEEEEEEcCCccccCCCCCCceEEEEEEEEEeCCC-CCcccccceEEEEeCCCCCCCEEEEEEEECCCCCCCCceEEE
Confidence 478999963 26889999999999999 699999999999999996 99999999999999999999999
Q ss_pred eCCC--CCEEEECCCcEEEeCccCCccCC----CeEEEEEEEEeCCCC
Q psy5886 140 VPED--IPFVVDANTGDIRTNKALDYEKQ----QLYLERVFLISKFAT 181 (184)
Q Consensus 140 l~~~--~~F~Id~~tG~i~~~~~LD~E~~----~~y~l~V~a~D~~~~ 181 (184)
|..+ .+|.||+.+|.|++.+.||||.. ..|+|+|.|+|+...
T Consensus 377 i~~~~~~~f~Id~~tG~i~~~~~lDrE~~~~~~~~y~l~V~A~D~g~p 424 (559)
T 3q2w_A 377 KLSDPANWLKIDPVNGQITTIAVLDRESPNVKNNIYNATFLASDNGIP 424 (559)
T ss_dssp EEECTTCCEEECTTTCEEEESSCCCSSSTTSCSSEEEEEEEEEECSSS
T ss_pred EccCCccceEecCCceEEEEccccCcccccccCCEEEEEEEEEcCCCC
Confidence 9753 67999999999999999999976 899999999998764
No 22
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=99.96 E-value=2e-28 Score=220.47 Aligned_cols=164 Identities=24% Similarity=0.316 Sum_probs=146.2
Q ss_pred CCCCCceEEEEEeCCCCCCcEEEEEEEEeCC--CCCCcEEEEEEecCCCCCcccEEEc--C--CCC--------------
Q psy5886 12 MTSDSLFYGAMARDKHELGVTLMQVKATDKD--SGKFGLVEYRLLDNNTDAASYFNLD--P--ATE-------------- 71 (184)
Q Consensus 12 ~~~~~~~y~~~v~E~~~~gt~v~~v~a~D~D--~~~n~~~~y~i~~~~~~~~~~F~id--~--~tg-------------- 71 (184)
+.+.+..|.+.|+|| ++|+.|+++.|+|+| .+.|+.++|+|.+ +. .+.|.|+ + .+|
T Consensus 374 P~F~~~~y~~~V~En-~~gt~V~~v~A~D~D~~~g~n~~v~Ysi~~-~~--~~~F~I~~d~~~~~G~i~~~~~LD~E~~~ 449 (880)
T 1q55_A 374 PIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRV-NE--GGFFNITTDPESNQGILTTAKGLDFELRK 449 (880)
T ss_dssp CCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSC-CT--TSCEEEEECTTTCCEEEEESSCCCCSSCC
T ss_pred CCccccceEEEeecC-CCCcEEEEEEEECCCCCCCCCceEEEEEec-CC--CceEEEEecCCCceEEEecccCCCcccCC
Confidence 344566899999999 999999999999999 6789999999987 33 4789994 4 345
Q ss_pred ---eEEEEEeCC-----CCeeEEEEEEEEEeCCCCCCEEecCceEEEEeCCCC-CcEEEEEEEEeCCCCCCcEEEEEeCC
Q psy5886 72 ---HQGPIQDEG-----GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE 142 (184)
Q Consensus 72 ---~~v~a~d~~-----~~~~~~~v~I~V~d~ND~~P~f~~~~~~~~v~e~~~-g~~v~~v~a~D~D~~~n~~i~y~l~~ 142 (184)
+.|.|+|.+ .++++++|.|.|.|+|| +|.|.+..|.+.|+|+++ |+.|++|.|+|+|.+.|+.++|+|..
T Consensus 450 ~y~l~V~A~D~~~~~~~~~sst~tV~I~V~DvND-~P~f~~~~y~~~V~En~~~Gt~V~~v~A~D~D~g~n~~v~Ysi~~ 528 (880)
T 1q55_A 450 QYVLQITVENAEPFSVPLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGN 528 (880)
T ss_dssp CEEEEECCEESSCCSSCCCCCCEEEEEEEECCCC-CCEESSCEECCCBCTTCCSSEEEEECCEECCCTTCCCCEEEEECC
T ss_pred cEEEEEEEEECCCCCCCCcceeEEEEEEEEeCCC-CCEEecCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCcEEEEECC
Confidence 478999976 36889999999999999 999999999999999996 99999999999999999999999986
Q ss_pred C--CCEEEECCCcEEEeCccCCccCC----CeEEEEEEEEeCCC
Q psy5886 143 D--IPFVVDANTGDIRTNKALDYEKQ----QLYLERVFLISKFA 180 (184)
Q Consensus 143 ~--~~F~Id~~tG~i~~~~~LD~E~~----~~y~l~V~a~D~~~ 180 (184)
+ .+|.||+.+|.|++.+.||||.. ..|+|+|.|+|+..
T Consensus 529 ~~~~~F~Id~~tG~I~~~~~LDrE~~~~~~~~y~l~V~A~D~g~ 572 (880)
T 1q55_A 529 DPARWLTVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLVTDDGV 572 (880)
T ss_dssp CSSCCCEEETTTTEEEECSCCCTTSSSCCSSCCEEEEEEEECSS
T ss_pred CCCCCEEEeCCccEEEECCccCcccccCCCCEEEEEEEEEECCC
Confidence 4 67999999999999999999997 89999999999864
No 23
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=99.95 E-value=3.3e-27 Score=190.68 Aligned_cols=147 Identities=19% Similarity=0.218 Sum_probs=120.3
Q ss_pred cEEEEEEEEeCCCCCCcEEEEEEecCCCC-------CcccEEEcCCCC----------------------eEEEEEeCC-
Q psy5886 31 VTLMQVKATDKDSGKFGLVEYRLLDNNTD-------AASYFNLDPATE----------------------HQGPIQDEG- 80 (184)
Q Consensus 31 t~v~~v~a~D~D~~~n~~~~y~i~~~~~~-------~~~~F~id~~tg----------------------~~v~a~d~~- 80 (184)
..+.++.|+|+|.+.||.+.|+|..++.. ...+|.|++ +| +.|+|.|.+
T Consensus 4 ~p~~~~~atd~D~g~ng~v~y~l~~~~~~~~f~i~~~~~~F~i~~-tG~l~~~~~LD~E~~~~~~~~~~~l~v~a~d~~~ 82 (316)
T 3ubf_A 4 RPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNPWVTVET-NGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNA 82 (316)
T ss_dssp EEEEEEEEESGGGCSTTCEEEECCCSSTTCEEEESSCCSSEEECT-TSEEEESSCCCGGGSCTTCEEEEEEEEEC-----
T ss_pred CceEEEEEEecCCCCCceEEEEEEcCCCcceEEEeCCCCeEEECC-CeEEEECCccChhhcccccceEEEEEEEEcCCCC
Confidence 34667777777777777777777665421 124688888 87 245666766
Q ss_pred --CCeeEEEEEEEEEeCCCCCCEEecCc--eEEEEeCCCC-CcEEEEEEEEeCCCCCCcEEEEEeCC---CCCEEEECCC
Q psy5886 81 --GLSSTATVNIRVTDINDKNPEFQSLP--YEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPE---DIPFVVDANT 152 (184)
Q Consensus 81 --~~~~~~~v~I~V~d~ND~~P~f~~~~--~~~~v~e~~~-g~~v~~v~a~D~D~~~n~~i~y~l~~---~~~F~Id~~t 152 (184)
+++++++|.|.|.|+|||+|.|.+.. |.+.|+|+++ |+.|+++.|+|+|.+.| ++|+|.. ...|.|++.+
T Consensus 83 ~~~~s~~~~v~I~V~DvNDn~P~F~~~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~n--i~Y~i~~~~~~~~F~Id~~t 160 (316)
T 3ubf_A 83 GIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVRDRTGGRFEVDERS 160 (316)
T ss_dssp --CCCEEEEEEEEEECTTCCCCEECCSSSSEEEEECTTCCTTCEEEECCEECSSTTCC--EEEEEEEEESSSCEEECTTT
T ss_pred CCcccceEEEEEEEEECCCCCCccCCCCCCEEEEEeCCCCCCCEEEEEEEECCCCCCc--eEEEEEeCCCCCEEEEECCc
Confidence 46899999999999999999999886 8999999996 99999999999999866 9999974 3689999999
Q ss_pred cEEEeCccCCccCCCeEEEEEEEEeCCC
Q psy5886 153 GDIRTNKALDYEKQQLYLERVFLISKFA 180 (184)
Q Consensus 153 G~i~~~~~LD~E~~~~y~l~V~a~D~~~ 180 (184)
|.|++.++||||....|.|.|+|+|+.+
T Consensus 161 G~i~~~~~lD~e~~~~y~l~V~A~D~g~ 188 (316)
T 3ubf_A 161 GVVRTRGTDLFQLDMEYVLYVKAEDQNG 188 (316)
T ss_dssp CEEEECSSCCCCTTCEEEEEEEEEESCC
T ss_pred cEEEECCcCCcccCcEEEEEEEEEeCCC
Confidence 9999999999999999999999999875
No 24
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.91 E-value=5.9e-25 Score=152.64 Aligned_cols=92 Identities=30% Similarity=0.381 Sum_probs=86.3
Q ss_pred EEEEeCCCCCCEEecCceEEEEeCCCC-CcEEEEEEEEeCCCCCCcEEEEEeCCC------CCEEEECCCcEEEeCccCC
Q psy5886 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPED------IPFVVDANTGDIRTNKALD 162 (184)
Q Consensus 90 I~V~d~ND~~P~f~~~~~~~~v~e~~~-g~~v~~v~a~D~D~~~n~~i~y~l~~~------~~F~Id~~tG~i~~~~~LD 162 (184)
|+|.|+|||+|.|.+..|.+.|+|+++ |+.|+++.|+|+|.|.|+.++|+|..+ .+|.|++.+|.|++++.||
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I~~~~~LD 81 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLD 81 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTTTCEEEECSCCC
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCCeeEEEECccCC
Confidence 568999999999999999999999996 999999999999999999999999762 4699999999999999999
Q ss_pred ccCCCeEEEEEEEEeCCCC
Q psy5886 163 YEKQQLYLERVFLISKFAT 181 (184)
Q Consensus 163 ~E~~~~y~l~V~a~D~~~~ 181 (184)
||....|.|.|+|+|+.+.
T Consensus 82 ~E~~~~y~l~V~A~D~g~~ 100 (114)
T 2ee0_A 82 REETAIHKVTVLASDGSST 100 (114)
T ss_dssp TTTCSEEEEEEEEESSSSS
T ss_pred cccCcEEEEEEEEEECCCC
Confidence 9999999999999998764
No 25
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.90 E-value=9.4e-25 Score=152.68 Aligned_cols=92 Identities=21% Similarity=0.253 Sum_probs=86.3
Q ss_pred EEEEeCCCCCCEEecCceEEEEeCCCC-CcEEEEEEEEeCCCCCCcEEEEEeCCCC-----CEEEECCCcEEEeCccCCc
Q psy5886 90 IRVTDINDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPEDI-----PFVVDANTGDIRTNKALDY 163 (184)
Q Consensus 90 I~V~d~ND~~P~f~~~~~~~~v~e~~~-g~~v~~v~a~D~D~~~n~~i~y~l~~~~-----~F~Id~~tG~i~~~~~LD~ 163 (184)
++|.|+|||+|.|.+..|.+.|+|+++ |+.|+++.|+|+|.|.|+.++|+|..+. +|.|++.+|.|++++.|||
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~F~Id~~tG~I~~~~~LD~ 81 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLHRIDR 81 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEETTCCTTCEEEECCCCCSSSSCCSCCCCEECSCCTTHHHHEEECTTTCEEEECSCCCT
T ss_pred CeEecCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCCeEEEEEecCCCccccEEEEeCCceEEEECccCCc
Confidence 468999999999999999999999996 9999999999999999999999998753 5999999999999999999
Q ss_pred cCCCeEEEEEEEEeCCCC
Q psy5886 164 EKQQLYLERVFLISKFAT 181 (184)
Q Consensus 164 E~~~~y~l~V~a~D~~~~ 181 (184)
|....|.|.|+|+|+.+.
T Consensus 82 E~~~~y~l~V~A~D~g~p 99 (119)
T 2yst_A 82 EEVNQLRFTVMARDRGQP 99 (119)
T ss_dssp TTCSEEEEEEEECCSBTT
T ss_pred ccCCEEEEEEEEEECCCC
Confidence 999999999999998764
No 26
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.82 E-value=2.5e-20 Score=130.05 Aligned_cols=89 Identities=25% Similarity=0.349 Sum_probs=78.7
Q ss_pred CCCCCceEEEEEeCCCCCCcEEEEEEEEeCCCCCCcEEEEEEecCCCCCcccEEEcCCCC-----------------eEE
Q psy5886 12 MTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE-----------------HQG 74 (184)
Q Consensus 12 ~~~~~~~y~~~v~E~~~~gt~v~~v~a~D~D~~~n~~~~y~i~~~~~~~~~~F~id~~tg-----------------~~v 74 (184)
+.|.+..|.+.|+||+++|+.|+++.|+|+|.|.|++++|+|.++......+|.||+.+| +.|
T Consensus 12 P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~F~Id~~tG~I~~~~~LD~E~~~~y~l~V 91 (119)
T 2yst_A 12 PRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLHRIDREEVNQLRFTV 91 (119)
T ss_dssp CCCSSSEEEEEEETTCCTTCEEEECCCCCSSSSCCSCCCCEECSCCTTHHHHEEECTTTCEEEECSCCCTTTCSEEEEEE
T ss_pred CCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCCeEEEEEecCCCccccEEEEeCCceEEEECccCCcccCCEEEEEE
Confidence 344566999999999999999999999999999999999999987533347899999998 479
Q ss_pred EEEeCCC--CeeEEEEEEEEEeCCCCCC
Q psy5886 75 PIQDEGG--LSSTATVNIRVTDINDKNP 100 (184)
Q Consensus 75 ~a~d~~~--~~~~~~v~I~V~d~ND~~P 100 (184)
.|+|.|. ++++++|.|+|.|+|||+|
T Consensus 92 ~A~D~g~p~~s~~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 92 MARDRGQPPKTDKATVVLNIKDENDNVP 119 (119)
T ss_dssp EECCSBTTBCCEEEEEEEEEECSTTCCC
T ss_pred EEEECCCCCcEEEEEEEEEEEeccCCCC
Confidence 9999884 6799999999999999998
No 27
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.73 E-value=1.3e-17 Score=115.44 Aligned_cols=85 Identities=24% Similarity=0.257 Sum_probs=74.3
Q ss_pred CCCCCceEEEEEeCCCCCCcEEEEEEEEeCCCCCCcEEEEEEecCCC-CCcccEEEcCCCC-----------------eE
Q psy5886 12 MTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT-DAASYFNLDPATE-----------------HQ 73 (184)
Q Consensus 12 ~~~~~~~y~~~v~E~~~~gt~v~~v~a~D~D~~~n~~~~y~i~~~~~-~~~~~F~id~~tg-----------------~~ 73 (184)
+.|.+..|.+.|+||+++|+.|+++.|+|+|.|.|++++|+|....+ +...+|.||+.+| +.
T Consensus 12 P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I~~~~~LD~E~~~~y~l~ 91 (114)
T 2ee0_A 12 PVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVT 91 (114)
T ss_dssp CCCSCSEEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTTTCEEEECSCCCTTTCSEEEEE
T ss_pred CCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCCeeEEEECccCCcccCcEEEEE
Confidence 44556699999999999999999999999999999999999987422 2347899999999 57
Q ss_pred EEEEeCCCCeeEEEEEEEEEeCC
Q psy5886 74 GPIQDEGGLSSTATVNIRVTDIN 96 (184)
Q Consensus 74 v~a~d~~~~~~~~~v~I~V~d~N 96 (184)
|+|+|.|..+++++|.|+|.|+|
T Consensus 92 V~A~D~g~~~~~~~v~I~V~DvN 114 (114)
T 2ee0_A 92 VLASDGSSTPARATVTINVTDVN 114 (114)
T ss_dssp EEEESSSSSCEEEEEEEEEECCC
T ss_pred EEEEECCCCceEEEEEEEEEECC
Confidence 99999997779999999999997
No 28
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=99.72 E-value=4.8e-18 Score=132.54 Aligned_cols=87 Identities=18% Similarity=0.090 Sum_probs=77.1
Q ss_pred CCCceEEEEEeCCCCCCcEEEEEEEEeCCCCCCcEEEEEEecCCCCCcccEEEcCCCC-----------------eEEEE
Q psy5886 14 SDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE-----------------HQGPI 76 (184)
Q Consensus 14 ~~~~~y~~~v~E~~~~gt~v~~v~a~D~D~~~n~~~~y~i~~~~~~~~~~F~id~~tg-----------------~~v~a 76 (184)
+.+..|.+.|+||.++|+.|+++.|+|+|.|.|++++|+|..++ ...|.|++.+| +.|.|
T Consensus 139 F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~---~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A 215 (246)
T 2x2u_A 139 FPETRPSFRIRENRPPGTFHQFRLLPVQFLCPQISVAYRLLEGE---GLPFRSAPDSLEVSTRWALDREQREKYELVAVC 215 (246)
T ss_dssp SCSSCCCEEEEBTSCCCEEEECSCHHHHHHCTTSCEEEEEESCT---TSSEECCTTCCEEEESSCBCTTTCSEEEEEEEE
T ss_pred cCCCcEEEEEECCCCCCcEEEEEEEEcCCCCCCcEEEEEEccCC---CCCEEEECCcCEEEeCCccCccccceEEEEEEE
Confidence 55669999999999999999999999999999999999999874 47899999998 46888
Q ss_pred Ee-CC--CCeeEEEEEEEEEeCCCCCCEEe
Q psy5886 77 QD-EG--GLSSTATVNIRVTDINDKNPEFQ 103 (184)
Q Consensus 77 ~d-~~--~~~~~~~v~I~V~d~ND~~P~f~ 103 (184)
+| .| .++++++|.|+|.|+|||+|.|.
T Consensus 216 ~d~dg~p~~ss~~~v~I~V~DvNDn~P~F~ 245 (246)
T 2x2u_A 216 TVHAGAREEVVMVPFPVTVYDEDDSAPEFE 245 (246)
T ss_dssp EEC---CCEEEEEEEEEEEECSSCCSCCCC
T ss_pred EecCCCCcceEEEEEEEEEEEeCCCCCccC
Confidence 77 33 37899999999999999999995
No 29
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=99.69 E-value=1e-16 Score=122.59 Aligned_cols=86 Identities=28% Similarity=0.433 Sum_probs=69.9
Q ss_pred CCCCCceEEEEEeCCCCCCcEEEEEEEEeCCC---CCCcEEEEEEecCCCCCcccEEEcCCCC-----------------
Q psy5886 12 MTSDSLFYGAMARDKHELGVTLMQVKATDKDS---GKFGLVEYRLLDNNTDAASYFNLDPATE----------------- 71 (184)
Q Consensus 12 ~~~~~~~y~~~v~E~~~~gt~v~~v~a~D~D~---~~n~~~~y~i~~~~~~~~~~F~id~~tg----------------- 71 (184)
+.+.+..|.+.|+|++++|+.|+++.|+|+|. |.|++++|+|..++ ..|.|++.+|
T Consensus 105 P~F~~~~y~~~v~E~~~~Gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~----~~F~Id~~tG~I~~~~~~LD~E~~~~y 180 (215)
T 2a4e_A 105 PEFLHEIYHANVPERSNVGTSVIQVTASDADDPTYGNSAKLVYSILEGQ----PYFSVEAQTGIIRTALPNMDREAKEEY 180 (215)
T ss_dssp CEESSSSEEEEEETTCCTTCEEEECCEECSSCTTTCSSSCCEEEEEEST----TTEEECTTTCEEEECSSCCCSSSCSEE
T ss_pred CCccCCceEEEEECCCCCCCEEEEEEEEECCCCCCCCceEEEEEEeCCC----CcEEEeCCccEEEEcccCCCcccCCEE
Confidence 34455689999999999999999999999997 78999999999873 5799999988
Q ss_pred -eEEEEEeCC----CCeeEEEEEEEEEeCCCCCCE
Q psy5886 72 -HQGPIQDEG----GLSSTATVNIRVTDINDKNPE 101 (184)
Q Consensus 72 -~~v~a~d~~----~~~~~~~v~I~V~d~ND~~P~ 101 (184)
+.|+|+|.| +++++++|.|+|.|+|||+|.
T Consensus 181 ~l~V~A~D~g~~~~~~s~~~~v~I~V~DvNDn~P~ 215 (215)
T 2a4e_A 181 HVVIQAKDMGGHMGGLSGTTKVTITLTDDYKDDDK 215 (215)
T ss_dssp EEEEEEETTTTCTTCCEEEEEEEEEEEC-------
T ss_pred EEEEEEEECCCCCCCceeEEEEEEEEEECCCCCCC
Confidence 479999987 378999999999999999994
No 30
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.69 E-value=2.3e-17 Score=113.44 Aligned_cols=82 Identities=18% Similarity=0.287 Sum_probs=61.1
Q ss_pred eEEEEEeCCCCCCcE--EEEEEEEeCCCCCCcEEEEEEecCC--CCCcccEEEcCCCC-----------------eEEEE
Q psy5886 18 FYGAMARDKHELGVT--LMQVKATDKDSGKFGLVEYRLLDNN--TDAASYFNLDPATE-----------------HQGPI 76 (184)
Q Consensus 18 ~y~~~v~E~~~~gt~--v~~v~a~D~D~~~n~~~~y~i~~~~--~~~~~~F~id~~tg-----------------~~v~a 76 (184)
.|.++|+||+++|+. |+++ |.|.+.|+.++|+|.++. .+..+.|.||+.+| +.|.|
T Consensus 6 ~~~~~v~En~~~gt~~~v~~v---d~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A 82 (110)
T 1ncg_A 6 IPPINLPENSRGPFPQELVRI---RSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHA 82 (110)
T ss_dssp CCCEEECSSCCCCSSEEEEEC---CCGGGGGSCCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEE
T ss_pred eeeEEEeCCCCCCCcEEEEEE---eCCCCCCCEEEEEEeCCCCCCCcCCEEEEECCCCEEEECCcCCcccCCeEEEEEEE
Confidence 578999999999995 5555 778888999999999752 23457899999999 57999
Q ss_pred EeCCC--CeeEEEEEEEEEeCCCCCCEE
Q psy5886 77 QDEGG--LSSTATVNIRVTDINDKNPEF 102 (184)
Q Consensus 77 ~d~~~--~~~~~~v~I~V~d~ND~~P~f 102 (184)
+|.|. +++++.|.|.|.|+|||+|.|
T Consensus 83 ~D~g~p~~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 83 VDINGNQVENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp ECTTSCBCSCCEEEEEEEC---------
T ss_pred EECCCCceeeEEEEEEEEEECCCCCCCC
Confidence 99884 788999999999999999988
No 31
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.69 E-value=4.7e-18 Score=119.21 Aligned_cols=88 Identities=17% Similarity=0.238 Sum_probs=76.6
Q ss_pred CceEEEEEeCCCCCCcEEEEEEEEeCCCCCCcEEEEEEecCCC--CCcccEEEcCCCC-----------------eEEEE
Q psy5886 16 SLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNT--DAASYFNLDPATE-----------------HQGPI 76 (184)
Q Consensus 16 ~~~y~~~v~E~~~~gt~v~~v~a~D~D~~~n~~~~y~i~~~~~--~~~~~F~id~~tg-----------------~~v~a 76 (184)
...|.+.+.|++++|+.|+++. +|+|.|.|+.++|+|.++.. +....|.||+.+| +.|.|
T Consensus 14 ~~~~~v~e~e~~~~gt~v~~v~-~D~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A 92 (123)
T 2yqg_A 14 TAPVALREGEDLSKKNPIAKIH-SDLAEERGLKITYKYTGKGITEPPFGIFVFNKDTGELNVTSILDREETPFFLLTGYA 92 (123)
T ss_dssp CCCEEEESSSCCCSSCCCBCCC-CHHHHHHTCCCEEEEEEBTTTBSSCSSEEEETTTTEEEECSCCBTTTBSEEEEEEEE
T ss_pred CCCEEEEecCCCCCCCEEEEEE-ECCCCCCCceEEEEEecCCCCCCcCCCEEEeCCcCEEEECcccCcccCceEEEEEEE
Confidence 3478889899999999999999 69999999999999998632 2347899999998 57999
Q ss_pred EeCCC--CeeEEEEEEEEEeCCCCCCEEec
Q psy5886 77 QDEGG--LSSTATVNIRVTDINDKNPEFQS 104 (184)
Q Consensus 77 ~d~~~--~~~~~~v~I~V~d~ND~~P~f~~ 104 (184)
+|.|. +++++.|.|.|.|+|||+|.|.+
T Consensus 93 ~D~g~p~~~~~~~v~I~V~DvNDn~P~F~~ 122 (123)
T 2yqg_A 93 LDARGNNVEKPLELRIKVLDINDNEPVFTQ 122 (123)
T ss_dssp ECTTCCEEEEEECCEEEEECTTCCCCCCCC
T ss_pred EECCCCceEEEEEEEEEEEEcCCCCCEeCC
Confidence 99885 68889999999999999999975
No 32
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.67 E-value=1.1e-16 Score=107.98 Aligned_cols=71 Identities=32% Similarity=0.522 Sum_probs=65.3
Q ss_pred eEEEEeCCCC---CcEEEEEEEEeCCCCCCcEEEEEeCCC---CCEEEECCCcEEEeCccCCccCCCeEEEEEEEEeCC
Q psy5886 107 YEFSVPEGQD---GLAVGRVHATDADEGQNAVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKF 179 (184)
Q Consensus 107 ~~~~v~e~~~---g~~v~~v~a~D~D~~~n~~i~y~l~~~---~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~ 179 (184)
+.+.|+|+.+ |+.|++|+ +|+|.| |+.++|+|.++ ..|.||+.+|.|++.++||||....|+|+|.|+|+.
T Consensus 6 ~~~~v~En~~~~~g~~v~~v~-~D~D~g-Ng~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~G 82 (99)
T 1zvn_A 6 NQFFVLEEYTGTDPLYVGKLH-SDMDRG-DGSIKYILSGEGAGIVFTIDDTTGDIHAIQRLDREERSQYTLRAQALDRR 82 (99)
T ss_dssp CEEEEEGGGCSSSCEEEEECC-BTTCCS-SSCEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETT
T ss_pred cEEEEECCCCCCCCcEEEEEE-ECCCCC-CCEEEEEEeCCCCCceEEEeCCCCCEEECeecCCccCCeEEEEEEEEECC
Confidence 4688999964 78999999 999999 99999999764 459999999999999999999999999999999986
No 33
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.66 E-value=1.3e-17 Score=116.99 Aligned_cols=85 Identities=16% Similarity=0.318 Sum_probs=77.8
Q ss_pred CCCCCEEecCceEEEEeCCCC-CcEEEEEEEEeCCCCCCcEEEEEeCCC-------CCEEEECCCcEEEeCccCCccCCC
Q psy5886 96 NDKNPEFQSLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVVYYSVPED-------IPFVVDANTGDIRTNKALDYEKQQ 167 (184)
Q Consensus 96 ND~~P~f~~~~~~~~v~e~~~-g~~v~~v~a~D~D~~~n~~i~y~l~~~-------~~F~Id~~tG~i~~~~~LD~E~~~ 167 (184)
+.++|.|....|.+.+.|+++ |+.|++|. +|+|.+.|+.|+|+|..+ ..|.||+.||.|++.+.||||...
T Consensus 6 ~r~~p~f~~~~~~v~e~e~~~~gt~v~~v~-~D~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~ 84 (123)
T 2yqg_A 6 SGQKRAWITAPVALREGEDLSKKNPIAKIH-SDLAEERGLKITYKYTGKGITEPPFGIFVFNKDTGELNVTSILDREETP 84 (123)
T ss_dssp SCSCCSSCCCCEEEESSSCCCSSCCCBCCC-CHHHHHHTCCCEEEEEEBTTTBSSCSSEEEETTTTEEEECSCCBTTTBS
T ss_pred cccCCccCCCCEEEEecCCCCCCCEEEEEE-ECCCCCCCceEEEEEecCCCCCCcCCCEEEeCCcCEEEECcccCcccCc
Confidence 578999999999999999986 99999999 699999899999999753 579999999999999999999999
Q ss_pred eEEEEEEEEeCCCC
Q psy5886 168 LYLERVFLISKFAT 181 (184)
Q Consensus 168 ~y~l~V~a~D~~~~ 181 (184)
.|.|+|.|+|+.+.
T Consensus 85 ~y~l~V~A~D~g~p 98 (123)
T 2yqg_A 85 FFLLTGYALDARGN 98 (123)
T ss_dssp EEEEEEEEECTTCC
T ss_pred eEEEEEEEEECCCC
Confidence 99999999998753
No 34
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=99.65 E-value=8.3e-16 Score=117.07 Aligned_cols=83 Identities=28% Similarity=0.383 Sum_probs=74.4
Q ss_pred CCCCceEEEEEeCCCCCCcEEEEEEEEeCCCCCCcEEEEEEecCCCCCcccEEEcCCCC-----------------eEEE
Q psy5886 13 TSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE-----------------HQGP 75 (184)
Q Consensus 13 ~~~~~~y~~~v~E~~~~gt~v~~v~a~D~D~~~n~~~~y~i~~~~~~~~~~F~id~~tg-----------------~~v~ 75 (184)
.+.+..|.+.|+|++++|+.|+++.|+|+|.|.|+.++|+|..+ ..+|.|++.+| +.|+
T Consensus 108 ~f~~~~y~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~~----~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~ 183 (210)
T 3mvs_A 108 TFHNQPYSVRIPENTPVGTPIFIVNATDPDLGAGGSVLYSFQPP----SPFFAIDSARGIVTVIQELDYEVTQAYQLTVN 183 (210)
T ss_dssp EECSCSEEEEEETTCCTTCEEEECCEECCSSGGGGCEEEEESSC----CSSEEECTTTCEEEECSCCCTTTCSEEEEEEE
T ss_pred cCCCceEEEEEECCCCCCCEEEEEEEEeCCCCCCceEEEEEeCC----CCCEEEeCCcEEEEECCcCCCcccceEEEEEE
Confidence 34556899999999999999999999999999999999999865 26899999998 4799
Q ss_pred EEeCCC---CeeEEEEEEEEEeCCCCC
Q psy5886 76 IQDEGG---LSSTATVNIRVTDINDKN 99 (184)
Q Consensus 76 a~d~~~---~~~~~~v~I~V~d~ND~~ 99 (184)
|+|.|+ +++++++.|.|.|+|||+
T Consensus 184 a~D~g~~~~~s~~~~v~I~V~DvND~~ 210 (210)
T 3mvs_A 184 ATDQDKTRPLSTLANLAIIITDMQDMD 210 (210)
T ss_dssp EEECCSSSCCEEEEEEEEEEECCCCCC
T ss_pred EEECCCCCCCEEEEEEEEEEEccCCCC
Confidence 999883 799999999999999975
No 35
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.65 E-value=3.1e-16 Score=105.59 Aligned_cols=72 Identities=31% Similarity=0.377 Sum_probs=63.9
Q ss_pred eEEEEeCCC--C-CcEEEEEEEEeCCCCCCcEEEEEeCCC---CCEEEECCCcEEEeCccCCccCCCeEEEEEEEEeCCC
Q psy5886 107 YEFSVPEGQ--D-GLAVGRVHATDADEGQNAVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFA 180 (184)
Q Consensus 107 ~~~~v~e~~--~-g~~v~~v~a~D~D~~~n~~i~y~l~~~---~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~~ 180 (184)
+.+.|+|+. + |+.|+++. +|+|.| |++|+|+|.++ ..|.||+.+|.|++.++||||....|+|+|.|+|+..
T Consensus 5 ~~~~v~En~~~p~~~~v~~v~-~D~D~g-N~~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~g~ 82 (98)
T 1zxk_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGDGAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFET 82 (98)
T ss_dssp CEEEECGGGCSSSCEEEEECC-BCCCCC---CEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTT
T ss_pred ceEEEECCCCCCCCeEEEEEE-ECCCCC-CCEEEEEEeCCCCCCEEEEECCccEEEECccCCCcCCCeEEEEEEEEECCC
Confidence 568899998 4 88999997 999999 99999999764 3699999999999999999999999999999999875
No 36
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.64 E-value=2e-17 Score=116.30 Aligned_cols=89 Identities=15% Similarity=0.145 Sum_probs=72.4
Q ss_pred ceEEEEEeCCCCCCcEEEEEEEEeCCCCCCcEE---EEEEecCCCCCcccEEEcCCCCe---------------------
Q psy5886 17 LFYGAMARDKHELGVTLMQVKATDKDSGKFGLV---EYRLLDNNTDAASYFNLDPATEH--------------------- 72 (184)
Q Consensus 17 ~~y~~~v~E~~~~gt~v~~v~a~D~D~~~n~~~---~y~i~~~~~~~~~~F~id~~tg~--------------------- 72 (184)
..|..+|+|++++|+.|+++ |+|.|.+. +.+ +|+|.+++. ..+|.||+.||.
T Consensus 11 ~~~~~~V~E~~~~Gt~V~~v-a~D~d~~~-~~i~~~~Y~i~~~~~--~~~F~Id~~tG~i~~~~~LDRE~~c~~~~~y~l 86 (125)
T 1wyj_A 11 ATITYSVLEETDRGSLVGNL-AKDLGLSL-RELITRGAQILSKGN--KQLLQLEQKSGNLLLKEKLDREELCGSTNPCIL 86 (125)
T ss_dssp CCCCEEECSSCCTTCEEEES-TTTTTCCH-HHHHHTTCEEECSSS--SCSEEECSSSSEEEESSCCCSTTTCTTCSSCCB
T ss_pred ceEEEEEECCCCCCCEEEEE-EecCCCCC-CceeeEEEEEecCCC--CCeEEEECCccEEEECccccchhhcccCCcEEE
Confidence 36677899999999999999 99988764 334 899987643 478999999992
Q ss_pred EEEEEeCCCCeeEEEEEEEEEeCCCCCCEEecCceEEE
Q psy5886 73 QGPIQDEGGLSSTATVNIRVTDINDKNPEFQSLPYEFS 110 (184)
Q Consensus 73 ~v~a~d~~~~~~~~~v~I~V~d~ND~~P~f~~~~~~~~ 110 (184)
.++|.+..++ ..++|.|.|.|+|||+|.|.+..|.++
T Consensus 87 ~v~a~~~~p~-~~~~V~I~V~DvNDN~P~F~~~~y~vs 123 (125)
T 1wyj_A 87 HFQVLLKSPV-QFIQGEIQLQDVNDHAPEFMEDESGPS 123 (125)
T ss_dssp CCEEEETTTT-EEECCCEEECCCCCCCCCCCCCCCCCC
T ss_pred EEEEEECCCC-eEEEEEEEEEEccCCCCcCCCcEEEEe
Confidence 4666664444 578999999999999999999988764
No 37
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.60 E-value=3.9e-15 Score=100.36 Aligned_cols=70 Identities=21% Similarity=0.287 Sum_probs=63.0
Q ss_pred EEEEeCCCC-C--cEEEEEEEEeCCCCCCcEEEEEeCCC-------CCEEEECCCcEEEeCccCCccCCCeEEEEEEEEe
Q psy5886 108 EFSVPEGQD-G--LAVGRVHATDADEGQNAVVYYSVPED-------IPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177 (184)
Q Consensus 108 ~~~v~e~~~-g--~~v~~v~a~D~D~~~n~~i~y~l~~~-------~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D 177 (184)
.+.|+||.+ | +.|++|.|+|+|. .++|+|.+. ..|.||+.||.|++.++||||....|.|.|.|+|
T Consensus 6 ~~~v~EN~~~g~~~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D 81 (99)
T 3k6i_A 6 PILIPENQRPPFPRSVGKVIRSEGTE----GAKFRLSGKGVDQDPKGIFRINEISGDVSVTRPLDREAIANYELEVEVTD 81 (99)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCS----SEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEE
T ss_pred cEEEeCCCCCCCCeEEEEEEEEcCCC----eEEEEEeCCCCCCCcCCEEEEECCCcEEEECcccCCccCCEEEEEEEEEE
Confidence 368999996 5 8899999999998 699999752 4699999999999999999999999999999999
Q ss_pred CCCC
Q psy5886 178 KFAT 181 (184)
Q Consensus 178 ~~~~ 181 (184)
+.+.
T Consensus 82 ~g~~ 85 (99)
T 3k6i_A 82 LSGK 85 (99)
T ss_dssp TTSC
T ss_pred CCCC
Confidence 8764
No 38
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.59 E-value=1.9e-15 Score=101.97 Aligned_cols=71 Identities=27% Similarity=0.251 Sum_probs=63.8
Q ss_pred eEEEEeCCC-C--CcEEEEEEEEeCCCCCCcEEEEEeCC-------CCCEEEECCCcEEEeCccCCccCCCeEEEEEEEE
Q psy5886 107 YEFSVPEGQ-D--GLAVGRVHATDADEGQNAVVYYSVPE-------DIPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176 (184)
Q Consensus 107 ~~~~v~e~~-~--g~~v~~v~a~D~D~~~n~~i~y~l~~-------~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~ 176 (184)
..+.|+||. + |+.|++|+|+|+|. .++|+|.+ ...|.||+.||.|++.++||||....|+|+|.|+
T Consensus 5 ~~~~V~En~~~~~g~~v~~v~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~ 80 (99)
T 3k6d_A 5 PSISIPENQRIPFPKIVGRVVVSDRIP----GSKIKLYGKGVDQEPKGIFKINENSGEVSVTKALDREAIPSYQLQVETT 80 (99)
T ss_dssp CCEEEETTCCSCSSEEEEECBCSSCCT----TCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEE
T ss_pred CcEEEeCCCCCCCCcEEEEEEEECCCC----cEEEEEecCcCCCCCCCEEEEECCceEEEECcCCCcccCceEEEEEEEE
Confidence 357899998 4 99999999999987 69999964 1579999999999999999999999999999999
Q ss_pred eCCCC
Q psy5886 177 SKFAT 181 (184)
Q Consensus 177 D~~~~ 181 (184)
|+.+.
T Consensus 81 D~g~~ 85 (99)
T 3k6d_A 81 DENGK 85 (99)
T ss_dssp CTTCC
T ss_pred ECCCC
Confidence 98764
No 39
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.58 E-value=2.3e-15 Score=102.62 Aligned_cols=71 Identities=20% Similarity=0.360 Sum_probs=62.6
Q ss_pred EEEEeCCCC---CcEEEEEEEEeCCCCCCcEEEEEeCCC-------CCEEEECCCcEEEeCccCCccCCCeEEEEEEEEe
Q psy5886 108 EFSVPEGQD---GLAVGRVHATDADEGQNAVVYYSVPED-------IPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177 (184)
Q Consensus 108 ~~~v~e~~~---g~~v~~v~a~D~D~~~n~~i~y~l~~~-------~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D 177 (184)
.+.|+||.+ ++.|++|.| | .+.|+.++|+|..+ ..|.||+.||.|++.++||||....|+|+|.|+|
T Consensus 10 ~~~V~En~~~~~~~~v~~v~A-d--~g~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~LDrE~~~~y~l~V~A~D 86 (105)
T 2omz_B 10 PISCPENEKGPFPKNLVQIKS-N--KDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLFSHAVS 86 (105)
T ss_dssp CCCEESSCCSSSSEEEEECEE-G--GGGSSCCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEC
T ss_pred CEEEeCCCCCCCCcEEEEEEC-C--CCCCCeEEEEEeCCCCCCCccCEEEEeCCCCEEEECccCCcCCCCeEEEEEEEEE
Confidence 468999987 789999999 3 35689999999763 3699999999999999999999999999999999
Q ss_pred CCCC
Q psy5886 178 KFAT 181 (184)
Q Consensus 178 ~~~~ 181 (184)
+.+.
T Consensus 87 ~g~p 90 (105)
T 2omz_B 87 SNGN 90 (105)
T ss_dssp TTSC
T ss_pred CCCC
Confidence 8764
No 40
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.56 E-value=5.6e-15 Score=99.78 Aligned_cols=70 Identities=24% Similarity=0.307 Sum_probs=62.7
Q ss_pred EEEEeCCCC---CcEEEEEEEEeCCCCCCcEEEEEeCCC-------CCEEEECCCcEEEeCccCCccCCCeEEEEEEEEe
Q psy5886 108 EFSVPEGQD---GLAVGRVHATDADEGQNAVVYYSVPED-------IPFVVDANTGDIRTNKALDYEKQQLYLERVFLIS 177 (184)
Q Consensus 108 ~~~v~e~~~---g~~v~~v~a~D~D~~~n~~i~y~l~~~-------~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D 177 (184)
.+.|+||.+ |+.|++|.|+|+|. .++|+|.+. ..|.||+.||.|++.++||||....|+|+|.|+|
T Consensus 7 ~~~V~EN~~~~~g~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D 82 (100)
T 3k6f_A 7 PILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTD 82 (100)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEC
T ss_pred cEEEeCCCCCCCCcEEEEEEEEcCCC----CEEEEEeCCCCCCCcCCEEEEECCCCEEEECcccCCcCCCEEEEEEEEEE
Confidence 578999984 69999999999998 589999642 5699999999999999999999999999999999
Q ss_pred CCCC
Q psy5886 178 KFAT 181 (184)
Q Consensus 178 ~~~~ 181 (184)
+.+.
T Consensus 83 ~g~p 86 (100)
T 3k6f_A 83 ASGK 86 (100)
T ss_dssp TTCC
T ss_pred CCCC
Confidence 8764
No 41
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.54 E-value=1.4e-14 Score=99.49 Aligned_cols=73 Identities=19% Similarity=0.281 Sum_probs=63.4
Q ss_pred ceEEEEeCCCC-CcE--EEEEEEEeCCCCCCcEEEEEeCCC-------CCEEEECCCcEEEeCccCCccCCCeEEEEEEE
Q psy5886 106 PYEFSVPEGQD-GLA--VGRVHATDADEGQNAVVYYSVPED-------IPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175 (184)
Q Consensus 106 ~~~~~v~e~~~-g~~--v~~v~a~D~D~~~n~~i~y~l~~~-------~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a 175 (184)
.|.+.|+|+++ |+. |+++ |.|.+.|+.++|+|..+ ..|.||+.+|.|++.++||||....|.|.|.|
T Consensus 6 ~~~~~v~En~~~gt~~~v~~v---d~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A 82 (110)
T 1ncg_A 6 IPPINLPENSRGPFPQELVRI---RSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHA 82 (110)
T ss_dssp CCCEEECSSCCCCSSEEEEEC---CCGGGGGSCCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEE
T ss_pred eeeEEEeCCCCCCCcEEEEEE---eCCCCCCCEEEEEEeCCCCCCCcCCEEEEECCCCEEEECCcCCcccCCeEEEEEEE
Confidence 46789999996 985 5555 77888899999999752 46999999999999999999999999999999
Q ss_pred EeCCCC
Q psy5886 176 ISKFAT 181 (184)
Q Consensus 176 ~D~~~~ 181 (184)
+|+.+.
T Consensus 83 ~D~g~p 88 (110)
T 1ncg_A 83 VDINGN 88 (110)
T ss_dssp ECTTSC
T ss_pred EECCCC
Confidence 998753
No 42
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=99.49 E-value=1.1e-13 Score=105.44 Aligned_cols=83 Identities=23% Similarity=0.302 Sum_probs=70.6
Q ss_pred CCCCCceEEEEEeCCCCCCcEEEEEEEEeCCCC---CCcEEEEEEecCCCC--CcccEEEcCCCC---------------
Q psy5886 12 MTSDSLFYGAMARDKHELGVTLMQVKATDKDSG---KFGLVEYRLLDNNTD--AASYFNLDPATE--------------- 71 (184)
Q Consensus 12 ~~~~~~~y~~~v~E~~~~gt~v~~v~a~D~D~~---~n~~~~y~i~~~~~~--~~~~F~id~~tg--------------- 71 (184)
+.+.+..|.+.|+||+++|+.|+++.|+|+|.+ .|+.++|+|..+++. ....|.|++.+|
T Consensus 106 P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~~~~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~ 185 (213)
T 3qrb_A 106 PEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYP 185 (213)
T ss_dssp CEESCSEEEEEEETTCCTTCEEEECCEECCSCTTTSSTTCCEEEEEEEESCCSCSCSEEECTTTCEEEECSSCCCTTTCC
T ss_pred CccCCCceEEEEECCCCCCcEEEEEEEEeCCCCCCCcCcEEEEEEccCCCCCCcCCeEEEECCCcEEEEccCCCCCccCc
Confidence 344566899999999999999999999999999 899999999886532 347899999998
Q ss_pred ---eEEEEEeCC--CCeeEEEEEEEEEe
Q psy5886 72 ---HQGPIQDEG--GLSSTATVNIRVTD 94 (184)
Q Consensus 72 ---~~v~a~d~~--~~~~~~~v~I~V~d 94 (184)
+.|+|+|.| +++++++|.|+|.|
T Consensus 186 ~y~l~V~A~D~g~~~~s~t~~v~I~V~D 213 (213)
T 3qrb_A 186 TYTLVVQAADLQGEGLSTTAKAVITVKD 213 (213)
T ss_dssp EEEEEEEEETGGGTSCEEEEEEEEEEEC
T ss_pred eEEEEEEEEeCCCCCceEEEEEEEEEEC
Confidence 468888866 58888999998876
No 43
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.48 E-value=1.1e-13 Score=93.08 Aligned_cols=72 Identities=18% Similarity=0.246 Sum_probs=60.2
Q ss_pred EEEEEeCCCC--CCcEEEEEEEEeCCCCCCcEEEEEEecCCCCCcccEEEcCCCC-----------------eEEEEEeC
Q psy5886 19 YGAMARDKHE--LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE-----------------HQGPIQDE 79 (184)
Q Consensus 19 y~~~v~E~~~--~gt~v~~v~a~D~D~~~n~~~~y~i~~~~~~~~~~F~id~~tg-----------------~~v~a~d~ 79 (184)
+.++|+||.+ .|+.|+++. +|+|.| |++++|+|.+++. ...|.||+.+| +.|.|+|.
T Consensus 5 ~~~~v~En~~~p~~~~v~~v~-~D~D~g-N~~v~Ysi~~~~~--~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~ 80 (98)
T 1zxk_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGDGA--GTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDF 80 (98)
T ss_dssp CEEEECGGGCSSSCEEEEECC-BCCCCC---CEEEEEEETTB--TTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEET
T ss_pred ceEEEECCCCCCCCeEEEEEE-ECCCCC-CCEEEEEEeCCCC--CCEEEEECCccEEEECccCCCcCCCeEEEEEEEEEC
Confidence 5789999995 899999997 999999 9999999987633 26899999999 57999998
Q ss_pred CC---CeeEEEEEEEEEe
Q psy5886 80 GG---LSSTATVNIRVTD 94 (184)
Q Consensus 80 ~~---~~~~~~v~I~V~d 94 (184)
|. +++++.|.|.|.|
T Consensus 81 g~~~~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 81 ETNKPLEPPSEFIIKVQD 98 (98)
T ss_dssp TTCCBSSCCEEEEEEECC
T ss_pred CCCCCcceeEEEEEEEEC
Confidence 74 7888999998876
No 44
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.45 E-value=2.4e-13 Score=91.57 Aligned_cols=73 Identities=16% Similarity=0.259 Sum_probs=62.8
Q ss_pred eEEEEEeCCCC--CCcEEEEEEEEeCCCCCCcEEEEEEecCCCCCcccEEEcCCCC-----------------eEEEEEe
Q psy5886 18 FYGAMARDKHE--LGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE-----------------HQGPIQD 78 (184)
Q Consensus 18 ~y~~~v~E~~~--~gt~v~~v~a~D~D~~~n~~~~y~i~~~~~~~~~~F~id~~tg-----------------~~v~a~d 78 (184)
.+.+.|+||.+ .|+.|+++. +|+|.| |++++|+|.+++. .+.|.||+.+| +.|.|+|
T Consensus 5 ~~~~~v~En~~~~~g~~v~~v~-~D~D~g-Ng~v~Ysi~~~~~--~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D 80 (99)
T 1zvn_A 5 WNQFFVLEEYTGTDPLYVGKLH-SDMDRG-DGSIKYILSGEGA--GIVFTIDDTTGDIHAIQRLDREERSQYTLRAQALD 80 (99)
T ss_dssp CCEEEEEGGGCSSSCEEEEECC-BTTCCS-SSCEEEEEEETTB--TTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEE
T ss_pred ccEEEEECCCCCCCCcEEEEEE-ECCCCC-CCEEEEEEeCCCC--CceEEEeCCCCCEEECeecCCccCCeEEEEEEEEE
Confidence 46789999976 689999999 999999 9999999988643 26899999999 5799999
Q ss_pred CC---CCeeEEEEEEEEEe
Q psy5886 79 EG---GLSSTATVNIRVTD 94 (184)
Q Consensus 79 ~~---~~~~~~~v~I~V~d 94 (184)
.| ++++++.|.|.|.|
T Consensus 81 ~G~~p~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 81 RRTGRPMEPESEFIIKIQD 99 (99)
T ss_dssp TTTCCBSSCCEEEEEEEEC
T ss_pred CCCCCCcceeEEEEEEEeC
Confidence 87 26888999999886
No 45
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=99.45 E-value=4.5e-13 Score=101.65 Aligned_cols=80 Identities=36% Similarity=0.498 Sum_probs=69.0
Q ss_pred CCCCCCceEEEEEeCCCCCCcEEEEEEEEeCCC---CCCcEEEEEEecCCCCCcccEEEcCCCC----------------
Q psy5886 11 EMTSDSLFYGAMARDKHELGVTLMQVKATDKDS---GKFGLVEYRLLDNNTDAASYFNLDPATE---------------- 71 (184)
Q Consensus 11 ~~~~~~~~y~~~v~E~~~~gt~v~~v~a~D~D~---~~n~~~~y~i~~~~~~~~~~F~id~~tg---------------- 71 (184)
++.+.+..|.+.|+||+++|+.|+++.|+|+|. |.|+.++|+|..++ ..|.|++.+|
T Consensus 103 ~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~----~~F~Id~~tG~i~~~~~~lD~E~~~~ 178 (207)
T 3lnd_A 103 EPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ----PYFSVESETGIIKTALLNMDRENREQ 178 (207)
T ss_dssp CCEESCSEEEEEEESSCCTTCEEEECCEECSSCTTSSSTTCCEEEEEESG----GGEEECTTTCEEEECCSSCCC--CCE
T ss_pred CCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCCCcEEEEEEcCCC----CCEEEcCCCcEEEECcccCCcccCCE
Confidence 344556799999999999999999999999998 78999999999863 5899999988
Q ss_pred --eEEEEEeCC----CCeeEEEEEEEEEe
Q psy5886 72 --HQGPIQDEG----GLSSTATVNIRVTD 94 (184)
Q Consensus 72 --~~v~a~d~~----~~~~~~~v~I~V~d 94 (184)
+.|+|+|.| +++++++|.|+|.|
T Consensus 179 y~l~V~A~D~g~~~~~~s~t~~v~I~V~D 207 (207)
T 3lnd_A 179 YQVVIQAKDMGGQMGGLSGTTTVNITLTD 207 (207)
T ss_dssp EEEEEEEESGGGCTTCBEEEEEEEEEEEC
T ss_pred EEEEEEEEECCCCCCCcEeEEEEEEEEeC
Confidence 468888876 57888899998876
No 46
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=99.44 E-value=2.4e-13 Score=103.85 Aligned_cols=83 Identities=28% Similarity=0.350 Sum_probs=66.8
Q ss_pred CCCCCceEEEEEeCCCCCCcEEEEEEEEeCCC--CCCcEEEEEEecCCCC--CcccEEEcCCCC----------------
Q psy5886 12 MTSDSLFYGAMARDKHELGVTLMQVKATDKDS--GKFGLVEYRLLDNNTD--AASYFNLDPATE---------------- 71 (184)
Q Consensus 12 ~~~~~~~y~~~v~E~~~~gt~v~~v~a~D~D~--~~n~~~~y~i~~~~~~--~~~~F~id~~tg---------------- 71 (184)
+.+.+..|.+.|+||+++|+.|+++.|+|+|. |.|++++|+|..+++. ....|.|++.+|
T Consensus 106 P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~ 185 (215)
T 2qvi_A 106 PEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQ 185 (215)
T ss_dssp CBCSSSEEEEEECSSCCTTCEEEECCCBCSSCTTSTTTCCCCEEEECSSCCSSTTCEEECTTTCEEEECSCCCCTTTCSE
T ss_pred CcccCceeEEEEeCCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCeEEEcCCCcEEEEecCCCCcccCCe
Confidence 34456699999999999999999999999998 6899999999987532 347899999988
Q ss_pred --eEEEEEeCC-----CCeeEEEEEEEEEe
Q psy5886 72 --HQGPIQDEG-----GLSSTATVNIRVTD 94 (184)
Q Consensus 72 --~~v~a~d~~-----~~~~~~~v~I~V~d 94 (184)
+.|+|+|.| +++++++|.|+|.|
T Consensus 186 y~l~V~a~D~g~~p~~~ls~t~~v~I~V~D 215 (215)
T 2qvi_A 186 YTLIIQATDMEGNPTYGLSNTATAVITVTD 215 (215)
T ss_dssp EEEEEECCTTTTCTTTSCCCEEEEEEEECC
T ss_pred EEEEEEEEECCCCCCCCcceEEEEEEEEEC
Confidence 356777764 25667777777765
No 47
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=99.43 E-value=5.4e-13 Score=101.95 Aligned_cols=83 Identities=27% Similarity=0.339 Sum_probs=66.0
Q ss_pred CCCCCceEEEEEeCCCCCCcEEEEEEEEeCCC--CCCcEEEEEEecCCCC--CcccEEEcCCCCe---------------
Q psy5886 12 MTSDSLFYGAMARDKHELGVTLMQVKATDKDS--GKFGLVEYRLLDNNTD--AASYFNLDPATEH--------------- 72 (184)
Q Consensus 12 ~~~~~~~y~~~v~E~~~~gt~v~~v~a~D~D~--~~n~~~~y~i~~~~~~--~~~~F~id~~tg~--------------- 72 (184)
+.+.+..|.+.|+||+++|+.|+++.|+|+|. +.|++++|+|.+++.. ...+|.||+.+|.
T Consensus 106 P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~~~LD~E~~ 185 (218)
T 3k5r_A 106 PIFREGPYIGHVMEGSPTGTTVMRMTAFDADDPATDNALLRYNIRQQTPDKPSPNMFYIDPEKGDIVTVVSPALLDRETL 185 (218)
T ss_dssp CCCCSCSEEEEEETTCCTTCEEEECCCSCSSSSCGGGGCEEEEEEEEESCCSCSCSEEECTTTCEEEECSCGGGCCGGGC
T ss_pred CcccCCceEEEEECCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCEEEEECCccEEEEeccCCCCCcccc
Confidence 34456689999999999999999999999999 6799999999987543 2367999999883
Q ss_pred -------EEEEEeCC----CCeeEEEEEEEEEe
Q psy5886 73 -------QGPIQDEG----GLSSTATVNIRVTD 94 (184)
Q Consensus 73 -------~v~a~d~~----~~~~~~~v~I~V~d 94 (184)
.|+|+|.| +++++++|.|+|.|
T Consensus 186 ~~~~y~l~V~a~D~gg~~p~~sst~~v~I~V~D 218 (218)
T 3k5r_A 186 ENPKYELIIEAQDMAGLDVGLTGTATATIVIDD 218 (218)
T ss_dssp SCSEEEEEEEEEECSSTTTTCEEEEEEEEEEEC
T ss_pred CCCeEEEEEEEEECCCCCCCeeEEEEEEEEEEC
Confidence 46667766 46677777777665
No 48
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=99.39 E-value=2.7e-12 Score=97.12 Aligned_cols=79 Identities=32% Similarity=0.455 Sum_probs=66.2
Q ss_pred CCCCCCceEEEEEeCCCCCCcEEEEEEEEeCCC---CCCcEEEEEEecCCCCCcccEEEcCCCC----------------
Q psy5886 11 EMTSDSLFYGAMARDKHELGVTLMQVKATDKDS---GKFGLVEYRLLDNNTDAASYFNLDPATE---------------- 71 (184)
Q Consensus 11 ~~~~~~~~y~~~v~E~~~~gt~v~~v~a~D~D~---~~n~~~~y~i~~~~~~~~~~F~id~~tg---------------- 71 (184)
++.+.+..|.+.|+||+++|+.|+++.|+|+|. |.|++++|+|..++ ..|.|+ .+|
T Consensus 101 ~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~----~~F~I~-~tG~i~~~~~~LD~E~~~~ 175 (203)
T 3ppe_A 101 APIFVQKIFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHATVTYQIIKGN----EYFTVD-DSGVIFTARADLDRESQSA 175 (203)
T ss_dssp CCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTSSSTTCEEEEEEEST----TTEEEC-TTSEEEESCSCCCTTTCSE
T ss_pred CCCccCCccEEEEeccCCCCcEEEEEEEEcCCCcCCCCceEEEEEEeCCC----CcEEEe-CCeEEEECCcCCCcccCCE
Confidence 344456689999999999999999999999994 78999999999874 489999 887
Q ss_pred --eEEEEEeC-C--CCeeEEEEEEEEEe
Q psy5886 72 --HQGPIQDE-G--GLSSTATVNIRVTD 94 (184)
Q Consensus 72 --~~v~a~d~-~--~~~~~~~v~I~V~d 94 (184)
+.|+|+|. | +++++++|.|+|.|
T Consensus 176 y~l~V~A~D~~G~p~~s~t~~v~I~V~D 203 (203)
T 3ppe_A 176 YEIIVKAKDALGLTGESSTATVIIRLTD 203 (203)
T ss_dssp EEEEEEEEETTCCCCSSSEEEEEEEEEC
T ss_pred EEEEEEEEeCCCCCCCeEEEEEEEEEEC
Confidence 46888887 4 26788888888876
No 49
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.37 E-value=1.4e-12 Score=87.79 Aligned_cols=72 Identities=15% Similarity=0.241 Sum_probs=60.0
Q ss_pred EEEEEeCCCCC--CcEEEEEEEEeCCCCCCcEEEEEEecC--CCCCcccEEEcCCCC-----------------eEEEEE
Q psy5886 19 YGAMARDKHEL--GVTLMQVKATDKDSGKFGLVEYRLLDN--NTDAASYFNLDPATE-----------------HQGPIQ 77 (184)
Q Consensus 19 y~~~v~E~~~~--gt~v~~v~a~D~D~~~n~~~~y~i~~~--~~~~~~~F~id~~tg-----------------~~v~a~ 77 (184)
+.+.|+||.++ |+.|+++.|+|+|. +++|+|.+. +.+..+.|.||+.+| +.|.|+
T Consensus 5 ~~~~V~En~~~~~g~~v~~v~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~ 80 (99)
T 3k6d_A 5 PSISIPENQRIPFPKIVGRVVVSDRIP----GSKIKLYGKGVDQEPKGIFKINENSGEVSVTKALDREAIPSYQLQVETT 80 (99)
T ss_dssp CCEEEETTCCSCSSEEEEECBCSSCCT----TCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEE
T ss_pred CcEEEeCCCCCCCCcEEEEEEEECCCC----cEEEEEecCcCCCCCCCEEEEECCceEEEECcCCCcccCceEEEEEEEE
Confidence 35789999999 99999999999997 589999863 223457899999999 479999
Q ss_pred eCCC--CeeEEEEEEEEEe
Q psy5886 78 DEGG--LSSTATVNIRVTD 94 (184)
Q Consensus 78 d~~~--~~~~~~v~I~V~d 94 (184)
|.|+ +++++.|.|+|.|
T Consensus 81 D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 81 DENGKTIEGPVDLEILVID 99 (99)
T ss_dssp CTTCCEEEEEEEEEEEEEC
T ss_pred ECCCCceeeEEEEEEEEEC
Confidence 9885 5678889998876
No 50
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.33 E-value=4.1e-12 Score=98.63 Aligned_cols=83 Identities=24% Similarity=0.263 Sum_probs=67.7
Q ss_pred CCCCCceEEEEEeCCCCCCcEEEE-----EEEEeCCCCCCcEEEEEEecCCCCC--cccEEEcC-CCC------------
Q psy5886 12 MTSDSLFYGAMARDKHELGVTLMQ-----VKATDKDSGKFGLVEYRLLDNNTDA--ASYFNLDP-ATE------------ 71 (184)
Q Consensus 12 ~~~~~~~y~~~v~E~~~~gt~v~~-----v~a~D~D~~~n~~~~y~i~~~~~~~--~~~F~id~-~tg------------ 71 (184)
+.+.+..|.+.|+||+++|+.|++ +.|+|+|.|.|++++|+|..++.+. ...|.||+ .+|
T Consensus 125 P~F~~~~y~~~v~En~~~Gt~v~~~~~~~v~A~D~D~g~N~~v~Ysi~~~~~~~~~~~~F~Id~~~tG~i~~~~~LD~E~ 204 (242)
T 4apx_B 125 PTFKHESYYATVNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPEDPTSNDTFEIPLMLTGNVVLRKRLNYED 204 (242)
T ss_dssp CEESSSCEEEEEETTCCTTCEEECTTTTTTSEECCSSGGGGCEEEEEECCTTSTTHHHHEECSSTTTCCEEECSCCCTTT
T ss_pred CcccceeeeeEeeeccCCCCEEEEeeecccccccCCCCcCCceEEEEecCCCCcccccceEEcCCCceEEEECCcCChhh
Confidence 445566899999999999999987 7899999999999999999876432 35799995 488
Q ss_pred -----eEEEEEeCCC-----CeeEEEEEEEEEe
Q psy5886 72 -----HQGPIQDEGG-----LSSTATVNIRVTD 94 (184)
Q Consensus 72 -----~~v~a~d~~~-----~~~~~~v~I~V~d 94 (184)
+.|+|+|.|. +++++.|+|+|.-
T Consensus 205 ~~~y~l~V~A~D~G~~~~~~~~~~~~vtVnVe~ 237 (242)
T 4apx_B 205 KTRYYVIIQANDRAQNLNERRTTTTTLTVDLEH 237 (242)
T ss_dssp CCEEEEEEEEEECCSSGGGCCEEEEEEEEEEEC
T ss_pred CCEEEEEEEEEECCcCchhcccCCceEEEEEee
Confidence 5799999883 5677888887763
No 51
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.32 E-value=6.8e-12 Score=84.51 Aligned_cols=71 Identities=17% Similarity=0.253 Sum_probs=59.4
Q ss_pred EEEEeCCCCC--CcEEEEEEEEeCCCCCCcEEEEEEecCC--CCCcccEEEcCCCC-----------------eEEEEEe
Q psy5886 20 GAMARDKHEL--GVTLMQVKATDKDSGKFGLVEYRLLDNN--TDAASYFNLDPATE-----------------HQGPIQD 78 (184)
Q Consensus 20 ~~~v~E~~~~--gt~v~~v~a~D~D~~~n~~~~y~i~~~~--~~~~~~F~id~~tg-----------------~~v~a~d 78 (184)
.+.|+||.+. |+.|++|.|+|+|. .++|+|.+.. .+....|.||+.+| +.|+|+|
T Consensus 7 ~~~V~EN~~~~~g~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D 82 (100)
T 3k6f_A 7 PILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTD 82 (100)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEC
T ss_pred cEEEeCCCCCCCCcEEEEEEEEcCCC----CEEEEEeCCCCCCCcCCEEEEECCCCEEEECcccCCcCCCEEEEEEEEEE
Confidence 4689999998 89999999999997 4899998642 22347899999999 4799999
Q ss_pred CCC--CeeEEEEEEEEEe
Q psy5886 79 EGG--LSSTATVNIRVTD 94 (184)
Q Consensus 79 ~~~--~~~~~~v~I~V~d 94 (184)
.|. ++++++|.|.|.|
T Consensus 83 ~g~p~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 83 ASGKTLEGPVPLEVIVID 100 (100)
T ss_dssp TTCCEEEEEEEEEEEEEC
T ss_pred CCCCcccceEEEEEEEEC
Confidence 885 6788899999886
No 52
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.32 E-value=1.1e-11 Score=83.26 Aligned_cols=70 Identities=14% Similarity=0.276 Sum_probs=58.8
Q ss_pred EEEeCCCCCC--cEEEEEEEEeCCCCCCcEEEEEEecCC--CCCcccEEEcCCCC-----------------eEEEEEeC
Q psy5886 21 AMARDKHELG--VTLMQVKATDKDSGKFGLVEYRLLDNN--TDAASYFNLDPATE-----------------HQGPIQDE 79 (184)
Q Consensus 21 ~~v~E~~~~g--t~v~~v~a~D~D~~~n~~~~y~i~~~~--~~~~~~F~id~~tg-----------------~~v~a~d~ 79 (184)
+.|+||.+.| +.|++|.|+|+|. +++|+|.+.+ .+..+.|.||+.+| +.|+|+|.
T Consensus 7 ~~v~EN~~~g~~~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~ 82 (99)
T 3k6i_A 7 ILIPENQRPPFPRSVGKVIRSEGTE----GAKFRLSGKGVDQDPKGIFRINEISGDVSVTRPLDREAIANYELEVEVTDL 82 (99)
T ss_dssp EEEETTCCSSSCEEEEECEETTCCS----SEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEET
T ss_pred EEEeCCCCCCCCeEEEEEEEEcCCC----eEEEEEeCCCCCCCcCCEEEEECCCcEEEECcccCCccCCEEEEEEEEEEC
Confidence 5899999987 9999999999997 6999998642 22347899999999 47999998
Q ss_pred CC--CeeEEEEEEEEEe
Q psy5886 80 GG--LSSTATVNIRVTD 94 (184)
Q Consensus 80 ~~--~~~~~~v~I~V~d 94 (184)
|+ +++.++|.|.|.|
T Consensus 83 g~~~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 83 SGKIIDGPVRLDISVID 99 (99)
T ss_dssp TSCEEEEEEEEEEEEEC
T ss_pred CCCceeeeEEEEEEEEC
Confidence 85 6788899999886
No 53
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.30 E-value=3.3e-12 Score=86.84 Aligned_cols=73 Identities=21% Similarity=0.284 Sum_probs=59.7
Q ss_pred EEEEeCCCC--CCcEEEEEEEEeCCCCCCcEEEEEEecCCCC--CcccEEEcCCCC-----------------eEEEEEe
Q psy5886 20 GAMARDKHE--LGVTLMQVKATDKDSGKFGLVEYRLLDNNTD--AASYFNLDPATE-----------------HQGPIQD 78 (184)
Q Consensus 20 ~~~v~E~~~--~gt~v~~v~a~D~D~~~n~~~~y~i~~~~~~--~~~~F~id~~tg-----------------~~v~a~d 78 (184)
.+.|+||++ .|+.|+++.| |.+.|++++|+|.+++.+ ..+.|.||+.+| +.|+|+|
T Consensus 10 ~~~V~En~~~~~~~~v~~v~A---d~g~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~LDrE~~~~y~l~V~A~D 86 (105)
T 2omz_B 10 PISCPENEKGPFPKNLVQIKS---NKDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLFSHAVS 86 (105)
T ss_dssp CCCEESSCCSSSSEEEEECEE---GGGGSSCCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEC
T ss_pred CEEEeCCCCCCCCcEEEEEEC---CCCCCCeEEEEEeCCCCCCCccCEEEEeCCCCEEEECccCCcCCCCeEEEEEEEEE
Confidence 468999998 5889999999 346799999999986432 136899999999 5799999
Q ss_pred CCC--CeeEEEEEEEEEeC
Q psy5886 79 EGG--LSSTATVNIRVTDI 95 (184)
Q Consensus 79 ~~~--~~~~~~v~I~V~d~ 95 (184)
.|. +++++.|.|.|.|+
T Consensus 87 ~g~p~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 87 SNGNAVEDPMEILITVTDQ 105 (105)
T ss_dssp TTSCBSSCCEEEEEEEEC-
T ss_pred CCCCceeeEEEEEEEEEeC
Confidence 884 67889999999985
No 54
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.26 E-value=6.6e-13 Score=93.08 Aligned_cols=74 Identities=20% Similarity=0.227 Sum_probs=62.9
Q ss_pred cCceEEEEeCCCC-CcEEEEEEEEeCCCCCCcEE---EEEeCCC---CCEEEECCCcEEEeCccCCccCC----CeEEEE
Q psy5886 104 SLPYEFSVPEGQD-GLAVGRVHATDADEGQNAVV---YYSVPED---IPFVVDANTGDIRTNKALDYEKQ----QLYLER 172 (184)
Q Consensus 104 ~~~~~~~v~e~~~-g~~v~~v~a~D~D~~~n~~i---~y~l~~~---~~F~Id~~tG~i~~~~~LD~E~~----~~y~l~ 172 (184)
...|.+.|+|+.+ |+.|++| |+|.|.+. +.+ +|+|..+ ..|.||+.||.|++.+.||||.. ..|.|.
T Consensus 10 ~~~~~~~V~E~~~~Gt~V~~v-a~D~d~~~-~~i~~~~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~c~~~~~y~l~ 87 (125)
T 1wyj_A 10 SATITYSVLEETDRGSLVGNL-AKDLGLSL-RELITRGAQILSKGNKQLLQLEQKSGNLLLKEKLDREELCGSTNPCILH 87 (125)
T ss_dssp CCCCCEEECSSCCTTCEEEES-TTTTTCCH-HHHHHTTCEEECSSSSCSEEECSSSSEEEESSCCCSTTTCTTCSSCCBC
T ss_pred CceEEEEEECCCCCCCEEEEE-EecCCCCC-CceeeEEEEEecCCCCCeEEEECCccEEEECccccchhhcccCCcEEEE
Confidence 3557789999996 9999999 89988763 334 8999653 57999999999999999999999 999999
Q ss_pred EEEEeCC
Q psy5886 173 VFLISKF 179 (184)
Q Consensus 173 V~a~D~~ 179 (184)
|.|.++.
T Consensus 88 v~a~~~~ 94 (125)
T 1wyj_A 88 FQVLLKS 94 (125)
T ss_dssp CEEEETT
T ss_pred EEEEECC
Confidence 9998743
No 55
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.23 E-value=2.2e-12 Score=87.45 Aligned_cols=77 Identities=14% Similarity=0.126 Sum_probs=60.1
Q ss_pred eEEEEEeCCCCCCcEEEEEEEEeCCCCCC--cEEEEEEecCCCCCcccEEEcCCCCe---------------------EE
Q psy5886 18 FYGAMARDKHELGVTLMQVKATDKDSGKF--GLVEYRLLDNNTDAASYFNLDPATEH---------------------QG 74 (184)
Q Consensus 18 ~y~~~v~E~~~~gt~v~~v~a~D~D~~~n--~~~~y~i~~~~~~~~~~F~id~~tg~---------------------~v 74 (184)
.|..+|+|++++|+.|+++ |.|.|.+.+ +.++|+|.+++ ...+|.||+.||. .+
T Consensus 4 ~~~~~V~E~~~~Gt~Vg~v-a~D~~~~~~~~~~~~y~i~~~~--~~~~F~Id~~tG~i~~~~~LDRE~~~~~~~~~~~~~ 80 (103)
T 1wuz_A 4 QIHYSIPEEAKHGTFVGRI-AQDLGLELTELVPRLFRVASKD--RGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHL 80 (103)
T ss_dssp EEEEEEESSCCTTCBCCCH-HHHHTCCHHHHTTTTBCCBCSS--CSCSEEEETTTTEEEECSCCSHHHHCSSSSSCEEEE
T ss_pred eEEEEEECCCCCCCEEEEE-EeccCCCCcccccEEEEEEeCC--CccEEEEECCeEEEEECCcCccccccCCCCcEEEEE
Confidence 6788999999999999999 999876432 35899998764 3589999999993 33
Q ss_pred EEEeCCCCeeEEEEEEEEEeCCCC
Q psy5886 75 PIQDEGGLSSTATVNIRVTDINDK 98 (184)
Q Consensus 75 ~a~d~~~~~~~~~v~I~V~d~ND~ 98 (184)
++....++ ..++|.|.|.|+|||
T Consensus 81 ~v~~~~p~-~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 81 EVIVDRPL-QVFHVEVEVRDINDN 103 (103)
T ss_dssp EEEETTTT-EEEEEEEEEECCSCC
T ss_pred EEEECCCC-EEEEEEEEEEEcCCC
Confidence 44433333 478999999999997
No 56
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.09 E-value=4.7e-12 Score=85.76 Aligned_cols=71 Identities=23% Similarity=0.252 Sum_probs=57.4
Q ss_pred CceEEEEeCCCC-CcEEEEEEEEeCCCCCC--cEEEEEeCCC---CCEEEECCCcEEEeCccCCccCCC------eEEEE
Q psy5886 105 LPYEFSVPEGQD-GLAVGRVHATDADEGQN--AVVYYSVPED---IPFVVDANTGDIRTNKALDYEKQQ------LYLER 172 (184)
Q Consensus 105 ~~~~~~v~e~~~-g~~v~~v~a~D~D~~~n--~~i~y~l~~~---~~F~Id~~tG~i~~~~~LD~E~~~------~y~l~ 172 (184)
..+.++|+|+.+ |+.|++| |.|+|...+ ..++|+|..+ .+|.||+.||.|++.+.||||... .|.+.
T Consensus 3 ~~~~~~V~E~~~~Gt~Vg~v-a~D~~~~~~~~~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~~~~~~~~~~~~~ 81 (103)
T 1wuz_A 3 SQIHYSIPEEAKHGTFVGRI-AQDLGLELTELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLE 81 (103)
T ss_dssp CEEEEEEESSCCTTCBCCCH-HHHHTCCHHHHTTTTBCCBCSSCSCSEEEETTTTEEEECSCCSHHHHCSSSSSCEEEEE
T ss_pred eeEEEEEECCCCCCCEEEEE-EeccCCCCcccccEEEEEEeCCCccEEEEECCeEEEEECCcCccccccCCCCcEEEEEE
Confidence 457889999996 9999999 999887522 3588999763 579999999999999999999853 56666
Q ss_pred EEEE
Q psy5886 173 VFLI 176 (184)
Q Consensus 173 V~a~ 176 (184)
|.|.
T Consensus 82 v~~~ 85 (103)
T 1wuz_A 82 VIVD 85 (103)
T ss_dssp EEET
T ss_pred EEEC
Confidence 6654
No 57
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=94.50 E-value=0.15 Score=36.38 Aligned_cols=78 Identities=17% Similarity=0.243 Sum_probs=58.4
Q ss_pred CCCCEEecCceEEEEeCCC-CCcEEEEEEEEeCCCCCCcEEEEEeCCCCCEEEECCCcEEEeCccCCccCCCeEEEEEEE
Q psy5886 97 DKNPEFQSLPYEFSVPEGQ-DGLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFL 175 (184)
Q Consensus 97 D~~P~f~~~~~~~~v~e~~-~g~~v~~v~a~D~D~~~n~~i~y~l~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a 175 (184)
...|-|.+..|...++-.. .|..+++|...|=. .+..+.|.-.+...|.|+ ..|.|++.+.+-.-. ..-.+.|.|
T Consensus 31 ~C~pGF~~~~~~~~vp~~l~~g~~lgkV~F~dC~--g~~~~~~~ssDp~dFkV~-~DGtVya~r~v~L~~-~~~~F~V~a 106 (159)
T 1op4_A 31 LCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCN--RKRKVQYESSEPADFKVD-EDGTVYAVRSFPLTA-EQAKFLIYA 106 (159)
T ss_dssp CCCCBCCSCEEEECCCCSSCSSCCEEECCCBCCS--SCCCEEEECCCSSEEEEE-TTTEEEEESCCSCSS-SCEEEEEEE
T ss_pred cccCCcCcceeEEeccccccCCceeceeecccCC--CCCceeEEcCCCCCeEEe-CCCcEEEecceeecC-CCcEEEEEE
Confidence 4789999999966666655 49999999887664 356788888665689997 559999998864332 233788999
Q ss_pred EeC
Q psy5886 176 ISK 178 (184)
Q Consensus 176 ~D~ 178 (184)
.|.
T Consensus 107 ~D~ 109 (159)
T 1op4_A 107 QDK 109 (159)
T ss_dssp EET
T ss_pred EcC
Confidence 884
No 58
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=81.62 E-value=8.4 Score=24.86 Aligned_cols=65 Identities=15% Similarity=0.164 Sum_probs=40.9
Q ss_pred CcEEEEEEEEeCCCCCCcEEEEEEecCC----CCCcccEEEcCCCC---eEEEEEeCCCC-eeEEEEEEEEEeC
Q psy5886 30 GVTLMQVKATDKDSGKFGLVEYRLLDNN----TDAASYFNLDPATE---HQGPIQDEGGL-SSTATVNIRVTDI 95 (184)
Q Consensus 30 gt~v~~v~a~D~D~~~n~~~~y~i~~~~----~~~~~~F~id~~tg---~~v~a~d~~~~-~~~~~v~I~V~d~ 95 (184)
+.+.....|.|.|.+ =.++.|.+.+.. ...+-.|..+...| +.++|.|..+. ..+..|.|.|.+-
T Consensus 17 ~~v~i~a~A~D~dg~-V~kVef~vdg~~vg~dt~apy~~~w~~~~G~htl~a~AtD~~G~~~tS~~v~vtV~~~ 89 (98)
T 3pe9_A 17 EFLKITATASDSDGK-ISRVDFLVDGEVIGSDREAPYEYEWKAVEGNHEISVIAYDDDDAASTPDSVKIFVKQA 89 (98)
T ss_dssp SEEEEEEEECCSSSC-EEEEEEEETTEEEEEECSSSEEEEEECCSEEEEEEEEEEETTCCBCCCEEEEEEEECC
T ss_pred CEEEEEEEEEeCCCC-EEEEEEEECCEEecccccCCEEEEEEcCCccEEEEEEEEECCCCEEeeeEEEEEECch
Confidence 455677788887743 357777775431 11222355555556 68899997764 4467888887754
No 59
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=73.34 E-value=23 Score=25.49 Aligned_cols=136 Identities=13% Similarity=0.007 Sum_probs=69.6
Q ss_pred cEEEEEEEEeCCCCCCcEEEEEEecCC----CCCcccEEEcCC-CC---eEEEEEeCCCCeeE-EEEEEEEEeCCCCCCE
Q psy5886 31 VTLMQVKATDKDSGKFGLVEYRLLDNN----TDAASYFNLDPA-TE---HQGPIQDEGGLSST-ATVNIRVTDINDKNPE 101 (184)
Q Consensus 31 t~v~~v~a~D~D~~~n~~~~y~i~~~~----~~~~~~F~id~~-tg---~~v~a~d~~~~~~~-~~v~I~V~d~ND~~P~ 101 (184)
.+-....|+ .| +.=.++.|.+.+.. ...+-.|..+.. .| +.++|.|..+..+. ..+.|.|.+ + .+|.
T Consensus 18 ~vtv~~~As-~d-~~V~~Ve~~~dg~~v~~~t~~~ys~~~~~~~~G~htlta~A~D~aGn~s~s~~v~vtV~~-~-~~Pt 93 (190)
T 3pdd_A 18 DINISATVK-SK-TPVSKVEFYNGDTLISSDTTAPYTAKITGAAVGAYNLKAVAVLSDGRRIESPVTPVLVKV-I-VKPT 93 (190)
T ss_dssp CEEEEEEEC-CS-SCEEEEEEEETTEEEEEECSSSEEEEECSCCSEEEEEEEEEEETTSCEEECCCEEEEEEC-C-CCCE
T ss_pred eEEEEEEEe-CC-CCEEEEEEEECCEEEccccCCceEEEeccCCCccEEEEEEEEECCCCEeeecceeEEecc-C-CCCc
Confidence 455566666 33 32234455443211 111123444433 33 68899998765443 457777776 3 6775
Q ss_pred EecCceEEEEeCCC----CC-cEEEEEEEEeCCCCCCcEEEEEeCCCCCEEEECCCcEEEeCccCCccCCCeEEEEEEEE
Q psy5886 102 FQSLPYEFSVPEGQ----DG-LAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVFLI 176 (184)
Q Consensus 102 f~~~~~~~~v~e~~----~g-~~v~~v~a~D~D~~~n~~i~y~l~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~ 176 (184)
. .+..+.+. .| ..-++..|.|.|.+ =.++.|.+.+ ....-+.... -...... ....|.|+++|+
T Consensus 94 v-----~itsP~~g~~~~~~~~vtl~~~AsD~~g~-V~~Ve~~~dg-~~v~t~t~~~-y~~~~~~---~~G~~tl~a~A~ 162 (190)
T 3pdd_A 94 V-----KLTAPKSNVVAYGNEFLKITATASDSDGK-ISRVDFLVDG-EVIGSDREAP-YEYEWKA---VEGNHEISVIAY 162 (190)
T ss_dssp E-----EEEECCTTCCCBTTSEEEEEEEEECSSSC-EEEEEEEETT-EEEEEECSSS-EEEEEEC---CSEEEEEEEEEE
T ss_pred e-----eecCCCCCcEEecCCeEEEEEEEECCCCc-EEEEEEEECC-EEEecccCCC-EEEEEec---CCeeEEEEEEEE
Confidence 4 24444432 23 34456777776542 2456666643 1111111111 0000000 467899999999
Q ss_pred eCCCC
Q psy5886 177 SKFAT 181 (184)
Q Consensus 177 D~~~~ 181 (184)
|..|.
T Consensus 163 D~aGn 167 (190)
T 3pdd_A 163 DDDDA 167 (190)
T ss_dssp ETTCC
T ss_pred ECCCC
Confidence 99875
No 60
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=70.68 E-value=7.4 Score=25.43 Aligned_cols=68 Identities=18% Similarity=0.247 Sum_probs=37.1
Q ss_pred CCCCCCEEecCceEEEEeCCCCCcEEEEEEEEeCCCCCCcEEEEEeCCCCCEEEECCCcEEEeCccCCccCCCeEEEEEE
Q psy5886 95 INDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPEDIPFVVDANTGDIRTNKALDYEKQQLYLERVF 174 (184)
Q Consensus 95 ~ND~~P~f~~~~~~~~v~e~~~g~~v~~v~a~D~D~~~n~~i~y~l~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~ 174 (184)
+.|.+|.+.... ...|..+..-....-+.|.|...| . .+..|.+....|......|.++..
T Consensus 6 ~~~~~P~It~~~-d~tI~~Gd~fd~~~gvtA~D~~DG--D----------------lT~~I~V~g~Vdt~k~G~Y~VtY~ 66 (103)
T 2kpn_A 6 TSDLEPKLTVPV-GATIHVGDSFVPMAEVLAIDKEDG--D----------------LTSKIKVDGEVDTTKAGTYVLTYT 66 (103)
T ss_dssp CCCCCCEEECCS-EEEEETTCCCCHHHHCEEECSSSC--B----------------CGGGCEEESCCCSSSCEEEEEEEE
T ss_pred cCCCCCEEEeCC-CEEEECCCCcccccCcEEEcCCCC--C----------------cceeEEEeCcccCCCceEEEEEEE
Confidence 345788886542 244443332111112577776554 1 112233334566667788888888
Q ss_pred EEeCCCC
Q psy5886 175 LISKFAT 181 (184)
Q Consensus 175 a~D~~~~ 181 (184)
++|+.|.
T Consensus 67 VtDs~Gn 73 (103)
T 2kpn_A 67 VTDSKGH 73 (103)
T ss_dssp EECTTSC
T ss_pred EEcCCCC
Confidence 8887764
No 61
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=65.86 E-value=25 Score=22.88 Aligned_cols=58 Identities=21% Similarity=0.211 Sum_probs=34.7
Q ss_pred EEEEeCCCCC-CcEEEEEEecCCCCCcccEEEcCCCCeEEEEEeCCCCeeEEEEEEEEEeCCCCCC
Q psy5886 36 VKATDKDSGK-FGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIRVTDINDKNP 100 (184)
Q Consensus 36 v~a~D~D~~~-n~~~~y~i~~~~~~~~~~F~id~~tg~~v~a~d~~~~~~~~~v~I~V~d~ND~~P 100 (184)
+.|+|...|. ..++..+ -.-+....+.+. +...++|+.+..++.+..|.|.+..+..|
T Consensus 33 vtA~D~~DGDlT~~I~V~-g~Vdt~k~G~Y~------VtY~VtDs~Gn~~t~trtVtV~~~~e~~~ 91 (103)
T 2kpn_A 33 VLAIDKEDGDLTSKIKVD-GEVDTTKAGTYV------LTYTVTDSKGHEVTAKQTVTVKVREEVKN 91 (103)
T ss_dssp CEEECSSSCBCGGGCEEE-SCCCSSSCEEEE------EEEEEECTTSCEEEEEEEEEEECSSCCCC
T ss_pred cEEEcCCCCCcceeEEEe-CcccCCCceEEE------EEEEEEcCCCCEEEEEEEEEEeCCCcccC
Confidence 6888877664 2233321 011111122232 47889999988888999999987654433
No 62
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.56 E-value=13 Score=23.90 Aligned_cols=28 Identities=25% Similarity=0.330 Sum_probs=23.7
Q ss_pred eEEEEEeCCCCeeEEEEEEEEEeCCCCCC
Q psy5886 72 HQGPIQDEGGLSSTATVNIRVTDINDKNP 100 (184)
Q Consensus 72 ~~v~a~d~~~~~~~~~v~I~V~d~ND~~P 100 (184)
+.+.++|..+.+++.++.|.|...+ +++
T Consensus 73 f~LTVtD~~G~s~s~~v~VtV~~~~-~~~ 100 (102)
T 2yrl_A 73 FTLTVKDERNLQSQSSVNVIVKEES-GPS 100 (102)
T ss_dssp EEEEEEBTTCCEEEEEEEEEEECCS-SCC
T ss_pred EEEEEEeCCCCEEEeEEEEEEcCCC-CCC
Confidence 5788999999999999999999877 443
No 63
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=60.65 E-value=57 Score=25.32 Aligned_cols=123 Identities=19% Similarity=0.241 Sum_probs=63.7
Q ss_pred CCCCCceEEEEEeCCCCCCcEEEEEEEEeCCCCCCcEEEEEEecCCCCCcccE-------EEcCCCC-------------
Q psy5886 12 MTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF-------NLDPATE------------- 71 (184)
Q Consensus 12 ~~~~~~~y~~~v~E~~~~gt~v~~v~a~D~D~~~n~~~~y~i~~~~~~~~~~F-------~id~~tg------------- 71 (184)
+.+.+..|. |.|+. |+.-..|..+. +......+.|+...+...+..-| .+.+.--
T Consensus 12 i~F~~~~y~--V~E~~--g~v~vtV~R~g-~~~~~vtV~y~T~~GTA~ag~Dy~~~~gtl~F~~Get~kti~V~I~dD~~ 86 (298)
T 3rb5_A 12 MYFEPGHYT--VMENC--GEFEVRVVRRG-DISTYASVEYETQDGTASAGTDFVGRKGLLSFPPGVDEQRFRIEVIDDDV 86 (298)
T ss_dssp EEESSSEEE--EETTS--CCEECCEEECS-CCSSCEEEEEEEEESSSCBTTTBCCCEEEEEECTTCCEECCEECBCCCSS
T ss_pred EEEeCCEEE--EecCc--eEEEEEEEEEC-CCCccEEEEEEeeCCccCCCCCccccceEEEECCCceEEEEEEEEeCCCC
Confidence 445555664 55885 66656665543 33344578888777643221111 1111100
Q ss_pred ------eEEEEEeC--C-CCeeEEEEEEEEEeCCCCCCEEecCceEEEEeCCCCCcEEEEEEEEeCCCCCCcEEEEEeCC
Q psy5886 72 ------HQGPIQDE--G-GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEGQNAVVYYSVPE 142 (184)
Q Consensus 72 ------~~v~a~d~--~-~~~~~~~v~I~V~d~ND~~P~f~~~~~~~~v~e~~~g~~v~~v~a~D~D~~~n~~i~y~l~~ 142 (184)
+.|..... + .+......+|.|.| ||++|.|.-..-.+.|.|+. |.....|.-+-. ....-.+.|...+
T Consensus 87 ~E~dEtF~v~Ls~p~~~a~lg~~~~atvtI~d-dD~~g~~~f~~~~~~V~E~~-g~~~~~V~Rs~~-~~g~vtV~~~T~d 163 (298)
T 3rb5_A 87 FEEDECFYIRLFNPSEGVKLAVPMIATVMILD-DDHAGIFAFTDSVFEITESV-GRFELKVMRYSG-ARGTVIVPYWTEN 163 (298)
T ss_dssp CCCCEEEEEEEECCCTTCCBCSCSEEEEEEEC-CCCCCEEECSCSEEEECTTC-CCEEEEEEEESC-CCSCEEEEEEEEE
T ss_pred ccCcEEEEEEEeCCCCCcEECCCceEEEEEec-cccccccccccccEEeecCC-ceEEEEEEEEec-CCCCEEEEEEecC
Confidence 34555543 1 13233345555566 46789886555567788875 555455544332 2223467777544
No 64
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=56.42 E-value=36 Score=21.75 Aligned_cols=50 Identities=18% Similarity=0.069 Sum_probs=31.5
Q ss_pred EEEEEEEEeCCCCCCcEEEEEeCCC-------CCEEEECCCcEEEeCccCCccCCCeEEEEEEEEeCCCC
Q psy5886 119 AVGRVHATDADEGQNAVVYYSVPED-------IPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFAT 181 (184)
Q Consensus 119 ~v~~v~a~D~D~~~n~~i~y~l~~~-------~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~~~ 181 (184)
......|.|.|.+ =.++.|.+.+. .+|...- .. . ...|+|.++|+|..|.
T Consensus 19 v~i~a~A~D~dg~-V~kVef~vdg~~vg~dt~apy~~~w--------~~---~-~G~htl~a~AtD~~G~ 75 (98)
T 3pe9_A 19 LKITATASDSDGK-ISRVDFLVDGEVIGSDREAPYEYEW--------KA---V-EGNHEISVIAYDDDDA 75 (98)
T ss_dssp EEEEEEECCSSSC-EEEEEEEETTEEEEEECSSSEEEEE--------EC---C-SEEEEEEEEEEETTCC
T ss_pred EEEEEEEEeCCCC-EEEEEEEECCEEecccccCCEEEEE--------Ec---C-CccEEEEEEEEECCCC
Confidence 4566777776642 45788888652 2333320 01 1 4789999999999885
No 65
>3klq_A Putative pilus anchoring protein; CNAB fold, inverse IGG fold, polyproline-II-like helix, cell; 1.90A {Streptococcus pyogenes}
Probab=42.89 E-value=55 Score=22.56 Aligned_cols=90 Identities=11% Similarity=0.172 Sum_probs=45.1
Q ss_pred eeEEEEEEEEEeCCCCCCEEecCceEEEEeCCCCCcEEEEEEEEeCCCC-CCcEEEEEeCCCCCEEEECCCcEEEeCccC
Q psy5886 83 SSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHATDADEG-QNAVVYYSVPEDIPFVVDANTGDIRTNKAL 161 (184)
Q Consensus 83 ~~~~~v~I~V~d~ND~~P~f~~~~~~~~v~e~~~g~~v~~v~a~D~D~~-~n~~i~y~l~~~~~F~Id~~tG~i~~~~~L 161 (184)
.+++.+.|.|....+. | .....|++.+....|-....++.- +.+.. .-+.|.|.-.+--.|.|....|. ...+
T Consensus 4 ~~~~~~~i~v~~~~~~-~-~~~~~Fsf~L~~~dPmP~~~tvt~-~a~G~v~F~~i~f~~~G~Y~YtI~E~~G~---~~gv 77 (141)
T 3klq_A 4 DSTVQTSISVENVLER-A-GDSTPFSVALESIDAMKTIEEITI-AGSGKASFSPLTFTTVGQYTYRVYQKPSQ---NKDY 77 (141)
T ss_dssp -CCEEECCEEEECCSS-T-TCCCEEEEEEEETTTTEEEEEEEE-ESSEEEECCCEEECSCEEEEEEEEECCCS---STTE
T ss_pred ccceEEEEEEEEeccc-C-CCCceEEEEEEeCCCCCCcEEEEE-cCCCcEEeCceEeCCCEEEEEEEEEeCCC---CCCc
Confidence 3567778888888764 3 445557777764334222333322 22211 11223332111123666554453 2444
Q ss_pred CccCCCeEEEEEEEEeCC
Q psy5886 162 DYEKQQLYLERVFLISKF 179 (184)
Q Consensus 162 D~E~~~~y~l~V~a~D~~ 179 (184)
.|.. ..|.++|.++|..
T Consensus 78 tYD~-~~y~VtV~V~~d~ 94 (141)
T 3klq_A 78 QADT-TVFDVLVYVTYDE 94 (141)
T ss_dssp ECCC-CEEEEEEEEEECT
T ss_pred EEcC-CEEEEEEEEEECC
Confidence 4555 6788888888653
No 66
>3us9_A Sodium/calcium exchanger 1; beta-sandwich, calcium binding protein, intracellular, metal protein; 2.68A {Canis lupus familiaris} PDB: 2klt_A
Probab=42.72 E-value=1.2e+02 Score=23.54 Aligned_cols=124 Identities=19% Similarity=0.211 Sum_probs=65.5
Q ss_pred CCCCCceEEEEEeCCCCCCcEEEEEEEEeCCCCCCcEEEEEEecCCCCCcccE-------EEcCCCC-------------
Q psy5886 12 MTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYF-------NLDPATE------------- 71 (184)
Q Consensus 12 ~~~~~~~y~~~v~E~~~~gt~v~~v~a~D~D~~~n~~~~y~i~~~~~~~~~~F-------~id~~tg------------- 71 (184)
+++.+..|.+ .|+. |+.-.+|.-...+....-.+.|+...+...+..-| .+.+.--
T Consensus 12 ~~f~~~~y~V--~E~~--G~v~vtV~R~gG~~~~~v~V~y~T~dGTA~~g~Dy~~~~gtl~F~~Get~kti~V~IidD~~ 87 (295)
T 3us9_A 12 IFFEQGTYQC--LENC--GTVALTIIRRGGDLTNTVFVDFRTEDGTANAGSDYEFTEGTVVFKPGETQKEIRVGIIDDDI 87 (295)
T ss_dssp EEESCSEEEE--EGGG--SCEEEEEEEEESSCCSCEEEEEEEEESSSCBTTTBCCCCEEEEECSSCCEEEEEECCCCCSS
T ss_pred EEecCCeEEE--ecCc--eEEEEEEEEecCCCCceEEEEEEeeCCcccCCcCccccceEEEECCCceEEEEEEEEeCCCc
Confidence 4556666654 4886 77777777766454445678898877643221111 1111100
Q ss_pred ------eEEEEEeCC--------------------CCeeEEEEEEEEEeCCCCCCEEecCceEEEEeCCCCCcEEEEEEE
Q psy5886 72 ------HQGPIQDEG--------------------GLSSTATVNIRVTDINDKNPEFQSLPYEFSVPEGQDGLAVGRVHA 125 (184)
Q Consensus 72 ------~~v~a~d~~--------------------~~~~~~~v~I~V~d~ND~~P~f~~~~~~~~v~e~~~g~~v~~v~a 125 (184)
+.|...... .+.......|.|.|- |++|.|.-..-.+.|.|+. |.....|.-
T Consensus 88 ~E~~EtF~v~Ls~~~~~~~~~~d~~~~~~~~~~~a~Lg~~~~atVtI~Dd-D~agv~sf~~~~~~V~E~~-G~~~v~V~R 165 (295)
T 3us9_A 88 FEEDKNFLVHLSNVKVSSEASEDGILEANHVSALACLGSPSTATVTIFDD-DHAGIFTFEEPVTHVSESI-GIMEVKVLR 165 (295)
T ss_dssp CCCCEEEEEEEECCCCCCCC-------------CCCCCSCCEEEEEEECC-CCCCEEEESCSEEEEESCS-SEEEEEEEE
T ss_pred ccCceEEEEEEecCccccccccccccccccCCcccccCCCceeEEEEccc-ccccccccCCCeEEEecCC-CeEEEEEEE
Confidence 344444421 122223455556664 6788876555567778873 444444443
Q ss_pred EeCCCCCCcEEEEEeCC
Q psy5886 126 TDADEGQNAVVYYSVPE 142 (184)
Q Consensus 126 ~D~D~~~n~~i~y~l~~ 142 (184)
+-. ....-.+.|...+
T Consensus 166 s~~-~~g~VtV~y~T~~ 181 (295)
T 3us9_A 166 TSG-ARGNVIVPYKTIE 181 (295)
T ss_dssp ESC-CCSCEEEEEEEEC
T ss_pred EcC-CCccEEEEEEecC
Confidence 322 2223456776644
No 67
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}
Probab=34.29 E-value=81 Score=19.30 Aligned_cols=17 Identities=24% Similarity=0.268 Sum_probs=13.6
Q ss_pred CCCeEEEEEEEEeCCCC
Q psy5886 165 KQQLYLERVFLISKFAT 181 (184)
Q Consensus 165 ~~~~y~l~V~a~D~~~~ 181 (184)
....|.|.|+|.+..+.
T Consensus 72 p~t~Y~~~V~A~n~~G~ 88 (108)
T 2dm4_A 72 VNTLYTVRVAAVTSRGI 88 (108)
T ss_dssp SSCEEEEEEEEEESSCE
T ss_pred CCCEEEEEEEEECCCce
Confidence 45589999999988764
No 68
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=33.22 E-value=1.1e+02 Score=20.49 Aligned_cols=105 Identities=19% Similarity=0.180 Sum_probs=50.2
Q ss_pred CCCCCceEEEEEeCCCCCCcEEEEEEEEeCCCCCCcEEEEEEecCCCCCcccEEEcCCCCeEEEEEeCCCCeeEEEEEEE
Q psy5886 12 MTSDSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATEHQGPIQDEGGLSSTATVNIR 91 (184)
Q Consensus 12 ~~~~~~~y~~~v~E~~~~gt~v~~v~a~D~D~~~n~~~~y~i~~~~~~~~~~F~id~~tg~~v~a~d~~~~~~~~~v~I~ 91 (184)
+.+.+..|.+ .|+. |+.-.+|...- +......+.|+...+...+..-|. +.+|. +.-. .|. ...++.|.
T Consensus 7 i~F~~~~y~V--~E~~--g~~~v~V~R~g-~~~~~v~V~y~t~~gTA~~g~Dy~--~~~g~-l~F~-~Ge--t~k~i~V~ 75 (137)
T 3ead_A 7 MYFEPGHYTV--MENC--GEFEVRVVRRG-DISTYASVEYETQDGTASAGTDFV--GRKGL-LSFP-PGV--DEQRFRIE 75 (137)
T ss_dssp EEESSCEEEE--EGGG--CEEEEEEEEES-CCSSCEEEEEEEECSSSCBTTTBC--CCEEE-EEEC-TTC--CEEEEEEE
T ss_pred EEEcCCEEEE--ECCC--eEEEEEEEEEC-CCCceEEEEEEeECCCcCCCCcEe--EeeEE-EEEC-CCc--eEEEEEEE
Confidence 3445556654 5875 66666665553 333446789988877543222221 12232 2222 222 24556665
Q ss_pred EEeCCCCCCEEecCceEEEEeCC---CC-Cc-EEEEEEEEeCCC
Q psy5886 92 VTDINDKNPEFQSLPYEFSVPEG---QD-GL-AVGRVHATDADE 130 (184)
Q Consensus 92 V~d~ND~~P~f~~~~~~~~v~e~---~~-g~-~v~~v~a~D~D~ 130 (184)
|+| |..+.- ...+.+.+... +. |. ..+++.-.|.|.
T Consensus 76 I~d--D~~~E~-~E~F~v~L~~p~~~a~lg~~~~atvtI~ddD~ 116 (137)
T 3ead_A 76 VID--DDVFEE-DECFYIRLFNPSEGVKLAVPMIATVMILDDDH 116 (137)
T ss_dssp BCC--CSSCCC-CEEEEEEEECCCTTCEECSCSEEEEEEECCC-
T ss_pred Eec--CCcccC-cEEEEEEEECCCCCcEECCCcEEEEEEECCCC
Confidence 554 334432 12244555432 21 32 345566566665
No 69
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=28.27 E-value=43 Score=20.40 Aligned_cols=20 Identities=15% Similarity=0.208 Sum_probs=16.7
Q ss_pred ccCCCeEEEEEEEEeCCCCC
Q psy5886 163 YEKQQLYLERVFLISKFATS 182 (184)
Q Consensus 163 ~E~~~~y~l~V~a~D~~~~s 182 (184)
|.....|.+++.|+|..+.+
T Consensus 55 y~~~G~Y~v~LtVtd~~G~~ 74 (85)
T 2y72_A 55 YKKAGTYNVTLKVTDDKGAT 74 (85)
T ss_dssp CSSCEEEEEEEEEEETTSCE
T ss_pred cCCCeEEEEEEEEEECCCCE
Confidence 56778999999999998753
No 70
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=28.07 E-value=1.6e+02 Score=20.67 Aligned_cols=50 Identities=20% Similarity=0.250 Sum_probs=34.4
Q ss_pred CCceEEEEEeCCCCCCcEEEEEEEEeCCCCCCcEEEEEEecCCCCCcccEEEcCCCC
Q psy5886 15 DSLFYGAMARDKHELGVTLMQVKATDKDSGKFGLVEYRLLDNNTDAASYFNLDPATE 71 (184)
Q Consensus 15 ~~~~y~~~v~E~~~~gt~v~~v~a~D~D~~~n~~~~y~i~~~~~~~~~~F~id~~tg 71 (184)
.+..|...++-+...|..|++|.-.|=.. +..+.|..... ..|.|+.+..
T Consensus 37 ~~~~~~~~vp~~l~~g~~lgkV~F~dC~g--~~~~~~~ssDp-----~dFkV~~DGt 86 (159)
T 1op4_A 37 PEDVYSAVLPKDVHEGQPLLNVKFSNCNR--KRKVQYESSEP-----ADFKVDEDGT 86 (159)
T ss_dssp CSCEEEECCCCSSCSSCCEEECCCBCCSS--CCCEEEECCCS-----SEEEEETTTE
T ss_pred CcceeEEeccccccCCceeceeecccCCC--CCceeEEcCCC-----CCeEEeCCCc
Confidence 45578888888899999999998876643 33455543321 2588877654
No 71
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=24.46 E-value=2.6e+02 Score=24.13 Aligned_cols=56 Identities=14% Similarity=0.115 Sum_probs=33.2
Q ss_pred EEEEEEeCC--CCCCcEEEEEeCC-C-CCEEEECCCcEEEeCccCCccCCCeEEEEEEEEeCCCC
Q psy5886 121 GRVHATDAD--EGQNAVVYYSVPE-D-IPFVVDANTGDIRTNKALDYEKQQLYLERVFLISKFAT 181 (184)
Q Consensus 121 ~~v~a~D~D--~~~n~~i~y~l~~-~-~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~~~ 181 (184)
+++...-.+ .+.+.+.+|+|.+ + .+-.. .....+.- ..| ....|+|.|+|++.++.
T Consensus 709 ~~i~fs~l~y~~~~~~~y~YrL~G~d~~W~~~-~~~~~~~y-tnL---~pG~Y~f~V~a~n~~g~ 768 (795)
T 4a2l_A 709 FSIEFVVSNYISGQHNTFAYKLEGYDKEWYYL-TDSRTVSY-SNL---PQGTYQFLVKAANSDGK 768 (795)
T ss_dssp EEEEEEECCTTTTTCCEEEEEEETTCSSCEEE-SSCCEEEE-ECC---CSEEEEEEEEEECTTSC
T ss_pred EEEEEEEccCCCccccEEEEEEeCCCCCccCC-CCcCeEEe-ccc---CCCeEEEEEEEECCCCc
Confidence 444444444 3455678899975 3 34444 22333322 222 56789999999998764
No 72
>2lkw_A Membrane fusion protein P15; viral protein; NMR {Baboon orthoreovirus}
Probab=24.45 E-value=25 Score=16.22 Aligned_cols=7 Identities=57% Similarity=1.141 Sum_probs=3.4
Q ss_pred CCCCCCC
Q psy5886 3 PCPIPSA 9 (184)
Q Consensus 3 ~~~~p~~ 9 (184)
|.|||++
T Consensus 11 papppna 17 (26)
T 2lkw_A 11 PAPPPNA 17 (26)
T ss_pred CCcCCCe
Confidence 4455544
No 73
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=22.37 E-value=3.2e+02 Score=22.49 Aligned_cols=21 Identities=29% Similarity=0.290 Sum_probs=16.3
Q ss_pred eEEEEEeCC--CCeeEEEEEEEE
Q psy5886 72 HQGPIQDEG--GLSSTATVNIRV 92 (184)
Q Consensus 72 ~~v~a~d~~--~~~~~~~v~I~V 92 (184)
+.+.++|.+ ++++..+|.|+|
T Consensus 414 f~LtVTD~~~p~lTs~~rViVtV 436 (437)
T 2yhg_A 414 ILLTLRDNGSPNLYAYRRVVINV 436 (437)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEE
T ss_pred EEEEEEeCCCCCccEEeEEEEEe
Confidence 567888887 678888888776
No 74
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=22.32 E-value=89 Score=19.46 Aligned_cols=17 Identities=12% Similarity=0.210 Sum_probs=13.8
Q ss_pred CCCeEEEEEEEEeCCCC
Q psy5886 165 KQQLYLERVFLISKFAT 181 (184)
Q Consensus 165 ~~~~y~l~V~a~D~~~~ 181 (184)
....|.++|.|.+..|.
T Consensus 85 p~t~Y~frV~A~n~~G~ 101 (121)
T 1wf5_A 85 PARSYQFRLCAVNDVGK 101 (121)
T ss_dssp TTCEEEEEEEEEESSCE
T ss_pred CCCEEEEEEEEEcCCcc
Confidence 44589999999998764
No 75
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=22.17 E-value=1.5e+02 Score=18.40 Aligned_cols=17 Identities=29% Similarity=0.286 Sum_probs=13.7
Q ss_pred CCCeEEEEEEEEeCCCC
Q psy5886 165 KQQLYLERVFLISKFAT 181 (184)
Q Consensus 165 ~~~~y~l~V~a~D~~~~ 181 (184)
....|.|+|+|.+..|.
T Consensus 84 p~t~Y~frV~A~n~~G~ 100 (120)
T 2crm_A 84 PGCFYRLRVYCISDGGQ 100 (120)
T ss_dssp TTSCEEEEEEEEETTEE
T ss_pred CCCEEEEEEEEEcCCcc
Confidence 45589999999998764
No 76
>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.98 E-value=1.6e+02 Score=18.75 Aligned_cols=17 Identities=18% Similarity=0.124 Sum_probs=14.2
Q ss_pred CCCeEEEEEEEEeCCCC
Q psy5886 165 KQQLYLERVFLISKFAT 181 (184)
Q Consensus 165 ~~~~y~l~V~a~D~~~~ 181 (184)
....|.++|+|.|..|.
T Consensus 89 p~t~Y~frV~A~N~~G~ 105 (127)
T 2dmk_A 89 SGTRYIFIVKAINQAGS 105 (127)
T ss_dssp SSCEEEEEEEEEESSCE
T ss_pred CCCEEEEEEEEEeCCCC
Confidence 45589999999998875
No 77
>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.67 E-value=92 Score=18.63 Aligned_cols=17 Identities=12% Similarity=0.008 Sum_probs=13.8
Q ss_pred CCCeEEEEEEEEeCCCC
Q psy5886 165 KQQLYLERVFLISKFAT 181 (184)
Q Consensus 165 ~~~~y~l~V~a~D~~~~ 181 (184)
....|.+.|+|.+..|.
T Consensus 73 p~t~Y~~~V~A~n~~G~ 89 (103)
T 2edy_A 73 PDTTYDIKVRAWTSKGS 89 (103)
T ss_dssp TTCCEEEECCEECSSCB
T ss_pred CCCEEEEEEEEECCCCC
Confidence 44589999999988775
No 78
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=20.83 E-value=1.5e+02 Score=18.00 Aligned_cols=18 Identities=22% Similarity=0.222 Sum_probs=14.5
Q ss_pred CCCeEEEEEEEEeCCCCC
Q psy5886 165 KQQLYLERVFLISKFATS 182 (184)
Q Consensus 165 ~~~~y~l~V~a~D~~~~s 182 (184)
....|.|+|+|.+..|.+
T Consensus 70 p~t~Y~frV~A~n~~G~g 87 (106)
T 1x4x_A 70 PATTYYCRVQALSVVGAG 87 (106)
T ss_dssp SSCEEEEEEEEECSSCCC
T ss_pred CCCEEEEEEEEEcCCcCC
Confidence 456899999999987753
Done!