RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy5888
(447 letters)
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 61.2 bits (149), Expect = 3e-13
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 254 TGEQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPL 292
+ +PY C+ C + FS +L H++ +H E+P KC +
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 58.9 bits (143), Expect = 2e-12
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 4/40 (10%)
Query: 224 TGKPKDRYACKFCGKVFPRSANLTRHLR-THTGEQPYKCK 262
GKP Y C+ CGK F R +L H++ HT E+P+KC+
Sbjct: 2 VGKP---YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38
Score = 36.9 bits (86), Expect = 1e-04
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 285 EKPFKCPLCDRCFGQQTNLDRHLKKH 310
KP+ C C + F + +L+ H+K+
Sbjct: 3 GKPYICQSCGKGFSRPDHLNGHIKQV 28
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 61.2 bits (149), Expect = 3e-13
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 251 RTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE 285
RTH+GE+PY+C C F+ S ++ H+ H +
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35
Score = 45.7 bits (109), Expect = 9e-08
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
H+ EKP++C +C F Q + H+ +
Sbjct: 2 THSGEKPYECYICHARFTQSGTMKMHILQK 31
Score = 41.9 bits (99), Expect = 3e-06
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 5/35 (14%)
Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRH-LRTHTGE 256
+G KP Y C C F +S + H L+ HT
Sbjct: 4 SGEKP---YECYICHARFTQSGTMKMHILQKHTEN 35
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 60.1 bits (146), Expect = 8e-13
Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 231 YACK--FCGKVFPRSANLTRHLRTHTGEQPYKCKY 263
++C CGK F +L H++ H+ + Y C++
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36
Score = 47.4 bits (113), Expect = 3e-08
Identities = 8/34 (23%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Query: 259 YKCKY--CERSFSISSNLQRHVRNIHNKEKPFKC 290
+ C C +SF+ +L+ H++ +H+ + + C
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMK-LHSDTRDYIC 34
Score = 28.1 bits (63), Expect = 0.19
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Query: 288 FKC--PLCDRCFGQQTNLDRHLKKHEADGP 315
F C P C + F + +L H+K H
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRD 31
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 58.5 bits (141), Expect = 5e-12
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 231 YACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIH 282
Y C+ CGK F + RH+ H G +PY C C + F + +L H++ IH
Sbjct: 4 YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK-IH 53
Score = 57.4 bits (138), Expect = 1e-11
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 256 EQPYKCKYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
++ Y C+ C +SF+ S RH+ +P+ C +C + F + +L H+K H
Sbjct: 1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGL-RPYGCGVCGKKFKMKHHLVGHMKIH 53
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 57.0 bits (138), Expect = 1e-11
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 251 RTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKEK 286
RTHTGE+PY C +C+++F L H + ++
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHFK-RYHDPN 35
Score = 44.7 bits (106), Expect = 2e-07
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
H EKP+ C CD+ F Q+ LD H K++
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMHFKRY 31
Score = 43.9 bits (104), Expect = 4e-07
Identities = 8/26 (30%), Positives = 11/26 (42%)
Query: 231 YACKFCGKVFPRSANLTRHLRTHTGE 256
YAC C K F + L H + +
Sbjct: 9 YACSHCDKTFRQKQLLDMHFKRYHDP 34
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 55.9 bits (135), Expect = 3e-11
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 248 RHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE 285
R + YKC C +SFS SS+L +H R H E
Sbjct: 2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRR-THTGE 38
Score = 43.2 bits (102), Expect = 9e-07
Identities = 8/35 (22%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 276 RHVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
R + + +KC C + F ++L +H + H
Sbjct: 2 RSEW-QQRERRRYKCDECGKSFSHSSDLSKHRRTH 35
Score = 42.8 bits (101), Expect = 1e-06
Identities = 15/26 (57%), Positives = 19/26 (73%)
Query: 231 YACKFCGKVFPRSANLTRHLRTHTGE 256
Y C CGK F S++L++H RTHTGE
Sbjct: 13 YKCDECGKSFSHSSDLSKHRRTHTGE 38
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 37
Score = 55.1 bits (133), Expect = 5e-11
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 249 HLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIH 282
R TG +P++C C+RSFS S +L H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRK-RH 34
Score = 43.6 bits (103), Expect = 6e-07
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 277 HVRNIHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
R KPF+CP CDR F + +L H K+H
Sbjct: 2 STR-GSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 39.3 bits (92), Expect = 2e-05
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTG 255
TG KP + C C + F RS +L H + H
Sbjct: 7 TGIKP---FQCPDCDRSFSRSDHLALHRKRHML 36
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 53.0 bits (128), Expect = 2e-10
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 253 HTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE 285
H+GE+PY C C ++FS SS L +H R +H E
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQR-VHTGE 33
Score = 50.7 bits (122), Expect = 2e-09
Identities = 18/34 (52%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Query: 224 TG-KPKDRYACKFCGKVFPRSANLTRHLRTHTGE 256
+G KP Y C CGK F RS+ L +H R HTGE
Sbjct: 3 SGEKP---YGCVECGKAFSRSSILVQHQRVHTGE 33
Score = 46.1 bits (110), Expect = 7e-08
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 281 IHNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
IH+ EKP+ C C + F + + L +H + H
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRVH 30
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 29
Score = 50.3 bits (121), Expect = 2e-09
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Query: 226 KPKDRYACKFCGKVFPRSANLTRHLRTHTGE 256
+ + C+ C + F R +L RH R+HT E
Sbjct: 1 RS---FVCEVCTRAFARQEHLKRHYRSHTNE 28
Score = 44.2 bits (105), Expect = 3e-07
Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Query: 258 PYKCKYCERSFSISSNLQRHVRNIHNKEK 286
+ C+ C R+F+ +L+RH R H EK
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYR-SHTNEK 29
Score = 37.2 bits (87), Expect = 8e-05
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 286 KPFKCPLCDRCFGQQTNLDRHLKKH 310
+ F C +C R F +Q +L RH + H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSH 25
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 48.1 bits (115), Expect = 1e-08
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Query: 226 KPKDRYACKFCGKVFPRSANLTRHLRTHTGE 256
K +AC C K F RS +L++H++TH +
Sbjct: 1 KK---FACPECPKRFMRSDHLSKHIKTHQNK 28
Score = 42.7 bits (101), Expect = 1e-06
Identities = 8/29 (27%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 258 PYKCKYCERSFSISSNLQRHVRNIHNKEK 286
+ C C + F S +L +H++ H +K
Sbjct: 2 KFACPECPKRFMRSDHLSKHIK-THQNKK 29
Score = 35.8 bits (83), Expect = 3e-04
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 286 KPFKCPLCDRCFGQQTNLDRHLKKH 310
K F CP C + F + +L +H+K H
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTH 25
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 48.0 bits (115), Expect = 2e-08
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Query: 226 KPKDRYACKFCGKVFPRSANLTRHLRTHTG 255
KP + C+ C + F RS +LT H+RTHTG
Sbjct: 2 KP---FQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 43.0 bits (102), Expect = 9e-07
Identities = 11/27 (40%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 256 EQPYKCKYCERSFSISSNLQRHVRNIH 282
++P++C+ C R+FS S +L H+R H
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIR-TH 26
Score = 39.5 bits (93), Expect = 1e-05
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 285 EKPFKCPLCDRCFGQQTNLDRHLKKH 310
+KPF+C +C R F + +L H++ H
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIRTH 26
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 30
Score = 46.6 bits (111), Expect = 4e-08
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 5/33 (15%)
Query: 226 KPKDRYACKF--CGKVFPRSANLTRHLRTHTGE 256
KP + C F C K + R NL HLR+HTGE
Sbjct: 1 KP---HKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 37.7 bits (88), Expect = 7e-05
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Query: 258 PYKCKY--CERSFSISSNLQRHVRNIHNKE 285
P+KC + C +S+S NL+ H+R H E
Sbjct: 2 PHKCTFEGCRKSYSRLENLKTHLR-SHTGE 30
Score = 33.1 bits (76), Expect = 0.003
Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 286 KPFKC--PLCDRCFGQQTNLDRHLKKH 310
KP KC C + + + NL HL+ H
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSH 27
>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 31
Score = 45.4 bits (108), Expect = 1e-07
Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 5/33 (15%)
Query: 226 KPKDRYAC--KFCGKVFPRSANLTRHLRTHTGE 256
+P + C +CGK F RS L RH RTHTGE
Sbjct: 1 RP---FMCTWSYCGKRFTRSDELQRHKRTHTGE 30
Score = 39.2 bits (92), Expect = 2e-05
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Query: 258 PYKCKY--CERSFSISSNLQRHVRNIHNKEK 286
P+ C + C + F+ S LQRH R H EK
Sbjct: 2 PFMCTWSYCGKRFTRSDELQRHKR-THTGEK 31
Score = 32.3 bits (74), Expect = 0.005
Identities = 9/27 (33%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Query: 286 KPFKC--PLCDRCFGQQTNLDRHLKKH 310
+PF C C + F + L RH + H
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTH 27
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 35
Score = 44.7 bits (106), Expect = 2e-07
Identities = 9/30 (30%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 253 HTGEQPYKCKYCERSFSISSNLQRHVRNIH 282
+G++P+ C+ C +F+ +N RH++ +H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLK-VH 30
Score = 40.5 bits (95), Expect = 7e-06
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 231 YACKFCGKVFPRSANLTRHLRTHTGE 256
+ C+ C F AN RHL+ HT
Sbjct: 8 FVCRICLSAFTTKANCARHLKVHTDT 33
Score = 38.6 bits (90), Expect = 4e-05
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 282 HNKEKPFKCPLCDRCFGQQTNLDRHLKKH 310
+ ++PF C +C F + N RHLK H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 47
Score = 44.5 bits (105), Expect = 3e-07
Identities = 7/49 (14%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 240 FPRSANLTRHLRTHTGEQPYKCKYCE--RSFSISSNLQRHVRNIHNKEK 286
PR ++ ++++ ++ ++C + ++F N++ H++ H +++
Sbjct: 2 LPRG-SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQ-THLEDR 47
Score = 36.1 bits (83), Expect = 4e-04
Identities = 8/41 (19%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Query: 272 SNLQRHVRNIHNKEKPFKCPLCD--RCFGQQTNLDRHLKKH 310
++ ++V+ +K F+C + F ++ N+ H++ H
Sbjct: 5 GSIDKYVK--EMPDKTFECLFPGCTKTFKRRYNIRSHIQTH 43
Score = 36.1 bits (83), Expect = 4e-04
Identities = 8/33 (24%), Positives = 12/33 (36%)
Query: 224 TGKPKDRYACKFCGKVFPRSANLTRHLRTHTGE 256
C K F R N+ H++TH +
Sbjct: 14 MPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED 46
>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 29
Score = 43.8 bits (104), Expect = 4e-07
Identities = 17/32 (53%), Positives = 21/32 (65%), Gaps = 5/32 (15%)
Query: 226 KPKDRYACKF--CGKVFPRSANLTRHLRTHTG 255
+P YAC C + F RSA+LTRH+R HTG
Sbjct: 1 RP---YACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 37.7 bits (88), Expect = 6e-05
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 258 PYKCKY--CERSFSISSNLQRHVRNIH 282
PY C C+R FS S++L RH+R IH
Sbjct: 2 PYACPVESCDRRFSRSADLTRHIR-IH 27
Score = 33.1 bits (76), Expect = 0.003
Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Query: 286 KPFKC--PLCDRCFGQQTNLDRHLKKH 310
+P+ C CDR F + +L RH++ H
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIH 27
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 26
Score = 43.3 bits (103), Expect = 6e-07
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Query: 226 KPKDRYACKFCGKVFPRSANLTRHLRTHT 254
KP Y C CGK F +++ L H R HT
Sbjct: 1 KP---YKCLECGKAFSQNSGLINHQRIHT 26
Score = 39.1 bits (92), Expect = 2e-05
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Query: 258 PYKCKYCERSFSISSNLQRHVRNIH 282
PYKC C ++FS +S L H R IH
Sbjct: 2 PYKCLECGKAFSQNSGLINHQR-IH 25
Score = 32.6 bits (75), Expect = 0.004
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 286 KPFKCPLCDRCFGQQTNLDRHLKKH 310
KP+KC C + F Q + L H + H
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIH 25
>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 43.5 bits (103), Expect = 6e-07
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 5/33 (15%)
Query: 226 KPKDRYACKF--CGKVFPRSANLTRHLRTHTGE 256
KP + C F CGK F NL H+R HTG+
Sbjct: 1 KP---FQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 35.4 bits (82), Expect = 4e-04
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Query: 258 PYKCKY--CERSFSISSNLQRHVRNIHNKE 285
P++C + C + FS+ NL+ HVR IH +
Sbjct: 2 PFQCTFEGCGKRFSLDFNLRTHVR-IHTGD 30
Score = 31.2 bits (71), Expect = 0.013
Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 286 KPFKC--PLCDRCFGQQTNLDRHLKKH 310
KPF+C C + F NL H++ H
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIH 27
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 32
Score = 43.1 bits (102), Expect = 9e-07
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 231 YACKF--CGKVFPRSANLTRHLRTHTGE 256
Y+C C K F R+ +L RH ++H +
Sbjct: 4 YSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 40.8 bits (96), Expect = 5e-06
Identities = 9/32 (28%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Query: 256 EQPYKCKY--CERSFSISSNLQRHVRNIHNKE 285
++PY C + C+++F + +L RH + H ++
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKK-SHQEK 31
Score = 36.5 bits (85), Expect = 1e-04
Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 285 EKPFKC--PLCDRCFGQQTNLDRHLKKH 310
++P+ C P CD+ F + +L RH K H
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSH 28
>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 39.6 bits (93), Expect = 1e-05
Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Query: 231 YACKF--CGKVFPRSANLTRHLRTHT 254
Y C F C K F +S NL H+ TH
Sbjct: 3 YVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 35.0 bits (81), Expect = 5e-04
Identities = 9/24 (37%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Query: 258 PYKCKY--CERSFSISSNLQRHVR 279
PY C + C + F+ S+NL+ H+
Sbjct: 2 PYVCPFDGCNKKFAQSTNLKSHIL 25
Score = 33.1 bits (76), Expect = 0.003
Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 286 KPFKC--PLCDRCFGQQTNLDRHLKKH 310
+P+ C C++ F Q TNL H+ H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTH 27
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 35
Score = 36.2 bits (83), Expect = 2e-04
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 226 KPKDRYACKFCGKVFPRSANLTRHLRTHTGEQPY 259
+ + + AC+ CGK+F +L RH +H+GE+PY
Sbjct: 1 RTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPY 34
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 35.0 bits (80), Expect = 7e-04
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 231 YACKFCGKVFPRSANLTRHLRTHTGE 256
+ C CGK F S+ L RH HTGE
Sbjct: 3 HVCAECGKAFVESSKLKRHQLVHTGE 28
>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 34.7 bits (79), Expect = 7e-04
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 257 QPYKCKYCERSFSISSNLQRHVRNIHNKEK 286
+ Y+C+YCE + SSNL+ H++ H+KEK
Sbjct: 1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK 30
Score = 23.6 bits (50), Expect = 6.5
Identities = 9/29 (31%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 286 KPFKCPLCDRCFGQQTNLDRHLK-KHEAD 313
K ++C C+ +NL H+K KH +
Sbjct: 1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE 29
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 26
Score = 33.1 bits (75), Expect = 0.002
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 231 YACKFCGKVFPRSANLTRHLRTHTG 255
+ C+ CGK F R L H+R HTG
Sbjct: 2 HKCEVCGKCFSRKDKLKTHMRCHTG 26
Score = 32.0 bits (72), Expect = 0.007
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 287 PFKCPLCDRCFGQQTNLDRHLKKH 310
P KC +C +CF ++ L H++ H
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCH 24
Score = 26.6 bits (58), Expect = 0.51
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 258 PYKCKYCERSFSISSNLQRHVR 279
P+KC+ C + FS L+ H+R
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMR 22
>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 31
Score = 33.2 bits (76), Expect = 0.002
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 287 PFKCPLCDRCFGQQTNLDRHLKK 309
P+ C LC+R F ++ L RH +K
Sbjct: 1 PYPCGLCNRAFTRRDLLIRHAQK 23
Score = 30.9 bits (70), Expect = 0.017
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 258 PYKCKYCERSFSISSNLQRHVRNIHN 283
PY C C R+F+ L RH + IH+
Sbjct: 1 PYPCGLCNRAFTRRDLLIRHAQKIHS 26
Score = 24.4 bits (53), Expect = 3.8
Identities = 10/26 (38%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Query: 231 YACKFCGKVFPRSANLTRHLRT-HTG 255
Y C C + F R L RH + H+G
Sbjct: 2 YPCGLCNRAFTRRDLLIRHAQKIHSG 27
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 37
Score = 33.1 bits (76), Expect = 0.003
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 227 PKDRYACKFCGKVFPRSANLTRHLRTHTGEQ 257
P Y C FC + F + L H+ H ++
Sbjct: 2 PPRSYTCSFCKREFRSAQALGGHMNVHRRDR 32
Score = 30.1 bits (68), Expect = 0.041
Identities = 9/28 (32%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Query: 259 YKCKYCERSFSISSNLQRHVRNIHNKEK 286
Y C +C+R F + L H N+H +++
Sbjct: 6 YTCSFCKREFRSAQALGGH-MNVHRRDR 32
>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 31.7 bits (72), Expect = 0.007
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 231 YACKFCGKVFPRSANLTRHLRTH 253
+AC CG+ F RS RH + H
Sbjct: 4 FACDICGRKFARSDERKRHTKIH 26
Score = 31.3 bits (71), Expect = 0.010
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 285 EKPFKCPLCDRCFGQQTNLDRHLKKH 310
EKPF C +C R F + RH K H
Sbjct: 1 EKPFACDICGRKFARSDERKRHTKIH 26
Score = 30.2 bits (68), Expect = 0.025
Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Query: 256 EQPYKCKYCERSFSISSNLQRHVRNIHNK 284
E+P+ C C R F+ S +RH + IH +
Sbjct: 1 EKPFACDICGRKFARSDERKRHTK-IHLR 28
>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 28
Score = 31.8 bits (72), Expect = 0.009
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 230 RYACKFCGKVFPRSANLTRHLRTHTGEQ 257
+Y C+ CG + + L +H+RTHT +
Sbjct: 1 KYICEECGIRAKKPSMLKKHIRTHTDVR 28
Score = 23.7 bits (51), Expect = 5.4
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 259 YKCKYCERSFSISSNLQRHVR 279
Y C+ C S L++H+R
Sbjct: 2 YICEECGIRAKKPSMLKKHIR 22
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 30
Score = 29.7 bits (66), Expect = 0.043
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 231 YACKFCGKVFPRSANLTRHLRTHTGE 256
+ C C + F R L H+ +HTGE
Sbjct: 5 FTCSVCQETFRRRMELRLHMVSHTGE 30
>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId:
8355]}
Length = 26
Score = 29.7 bits (66), Expect = 0.046
Identities = 13/21 (61%), Positives = 13/21 (61%)
Query: 259 YKCKYCERSFSISSNLQRHVR 279
YKC CERSF S L RH R
Sbjct: 1 YKCGLCERSFVEKSALSRHQR 21
Score = 28.6 bits (63), Expect = 0.10
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 288 FKCPLCDRCFGQQTNLDRHLKKHE 311
+KC LC+R F +++ L RH + H+
Sbjct: 1 YKCGLCERSFVEKSALSRHQRVHK 24
Score = 25.1 bits (54), Expect = 1.7
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 231 YACKFCGKVFPRSANLTRHLRTH 253
Y C C + F + L+RH R H
Sbjct: 1 YKCGLCERSFVEKSALSRHQRVH 23
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 32
Score = 29.2 bits (65), Expect = 0.062
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 285 EKPFKCPLCDRCFGQQTNLDRHLKKHE 311
EKP+ CP+C F ++ + H++ H+
Sbjct: 1 EKPYSCPVCGLRFKRKDRMSYHVRSHD 27
Score = 26.2 bits (57), Expect = 0.80
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 231 YACKFCGKVFPRSANLTRHLRTHTG 255
Y+C CG F R ++ H+R+H G
Sbjct: 4 YSCPVCGLRFKRKDRMSYHVRSHDG 28
Score = 23.8 bits (51), Expect = 6.3
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 256 EQPYKCKYCERSFSISSNLQRHVRN 280
E+PY C C F + HVR+
Sbjct: 1 EKPYSCPVCGLRFKRKDRMSYHVRS 25
>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 28.9 bits (64), Expect = 0.075
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 285 EKPFKCPLCDRCFGQQTNLDRHLKKHEAD 313
E+PFKC +C + L HL+ H D
Sbjct: 1 ERPFKCQICPYASRNSSQLTVHLRSHTGD 29
Score = 27.7 bits (61), Expect = 0.20
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 231 YACKFCGKVFPRSANLTRHLRTHTGE 256
+ C+ C S+ LT HLR+HTG+
Sbjct: 4 FKCQICPYASRNSSQLTVHLRSHTGD 29
Score = 24.2 bits (52), Expect = 4.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 256 EQPYKCKYCERSFSISSNLQRHVR 279
E+P+KC+ C + SS L H+R
Sbjct: 1 ERPFKCQICPYASRNSSQLTVHLR 24
>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 29
Score = 29.1 bits (65), Expect = 0.076
Identities = 10/28 (35%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Query: 257 QPYKCKY--CERSFSISSNLQRHVRNIH 282
+PY CK C + ++ S+L++HV+ +H
Sbjct: 1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH 28
>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 29.0 bits (64), Expect = 0.087
Identities = 11/23 (47%), Positives = 18/23 (78%)
Query: 257 QPYKCKYCERSFSISSNLQRHVR 279
+PYKCK C+ + + SS+L +H+R
Sbjct: 2 KPYKCKTCDYAAADSSSLNKHLR 24
Score = 26.3 bits (57), Expect = 0.67
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 286 KPFKCPLCDRCFGQQTNLDRHLKKH 310
KP+KC CD ++L++HL+ H
Sbjct: 2 KPYKCKTCDYAAADSSSLNKHLRIH 26
Score = 23.6 bits (50), Expect = 7.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 231 YACKFCGKVFPRSANLTRHLRTHT 254
Y CK C S++L +HLR H+
Sbjct: 4 YKCKTCDYAAADSSSLNKHLRIHS 27
>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 31
Score = 28.4 bits (63), Expect = 0.12
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 230 RYACKF--CGKVFPRSANLTRHLRTHTGE 256
RY C F CG + ++ L HL HTGE
Sbjct: 3 RYICSFADCGAAYNKNWKLQAHLSKHTGE 31
>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger
peptide) {Drosophila melanogaster [TaxId: 7227]}
Length = 37
Score = 28.1 bits (62), Expect = 0.17
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 252 THTGEQPYKCKYCERSFSISSNLQRHVRNIHNK 284
T GE Y+CK C R ++ SN RH H +
Sbjct: 2 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKR 34
>d2fzcb2 g.41.7.1 (B:101-153) Aspartate carbamoyltransferase,
Regulatory-chain, C-terminal domain {Escherichia coli
[TaxId: 562]}
Length = 53
Score = 28.5 bits (64), Expect = 0.18
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 247 TRHLRTHTGEQPYKCKYCERSFS 269
+ +R + KCKYCE+ FS
Sbjct: 24 SFAVRKRANDIALKCKYCEKEFS 46
>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 28.0 bits (62), Expect = 0.19
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 258 PYKCKYCERSFSISSNLQRHVRN 280
PY C YC SF NL +H+++
Sbjct: 1 PYHCTYCNFSFKTKGNLTKHMKS 23
Score = 26.1 bits (57), Expect = 0.93
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 231 YACKFCGKVFPRSANLTRHLRTHT 254
Y C +C F NLT+H+++
Sbjct: 2 YHCTYCNFSFKTKGNLTKHMKSKA 25
>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 27.3 bits (60), Expect = 0.28
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 286 KPFKCPLCDRCFGQQTNLDRHLKKHEAD 313
+PFKC C Q +NL +H+KK D
Sbjct: 1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD 28
Score = 27.3 bits (60), Expect = 0.29
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 257 QPYKCKYCERSFSISSNLQRHVRNIH 282
+P+KC YC SNL +H++ H
Sbjct: 1 RPFKCNYCSFDTKQPSNLSKHMKKFH 26
>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 27.1 bits (60), Expect = 0.46
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 283 NKEKPFKCPL--CDRCFGQQTNLDRHLKKHE 311
+ +KPF C C + F + +L H KHE
Sbjct: 2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHE 32
>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 26
Score = 26.3 bits (57), Expect = 0.66
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 258 PYKCKYCERSFSISSNLQRHVRNIH 282
PYKC C + F +LQ H+ +H
Sbjct: 2 PYKCSSCSQQFMQKKDLQSHMIKLH 26
>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 28
Score = 26.2 bits (57), Expect = 0.69
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 287 PFKCPLCDRCFGQQTNLDRH 306
PF+CP C +C+ ++ NL H
Sbjct: 1 PFECPKCGKCYFRKENLLEH 20
>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 30
Score = 26.2 bits (57), Expect = 0.83
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 231 YACKF--CGKVFPRSANLTRHLRTHTGE 256
+ CK C K F +LTRH THTGE
Sbjct: 3 FPCKEEGCEKGFTSLHHLTRHSLTHTGE 30
>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 67
Score = 27.0 bits (60), Expect = 0.85
Identities = 10/25 (40%), Positives = 11/25 (44%), Gaps = 2/25 (8%)
Query: 288 FKCPLCDRCFGQQTNLDRHL--KKH 310
+C C R F TNL H K H
Sbjct: 16 HRCLACARYFIDSTNLKTHFRSKDH 40
>d1vqoz1 g.41.8.1 (Z:10-82) Ribosomal protein L37ae {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 73
Score = 27.3 bits (61), Expect = 0.87
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 10/41 (24%)
Query: 228 KDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSF 268
+ +AC CG+ R R TG ++C YC+ F
Sbjct: 25 NEDHACPNCGE--------DRVDRQGTG--IWQCSYCDYKF 55
>d2dkta1 g.89.1.1 (A:8-81) RING finger and CHY zinc finger
domain-containing protein 1 {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 74
Score = 27.4 bits (60), Expect = 0.90
Identities = 6/44 (13%), Positives = 11/44 (25%), Gaps = 3/44 (6%)
Query: 233 CKFCGKVFPR---SANLTRHLRTHTGEQPYKCKYCERSFSISSN 273
C K++ H + +C CE+
Sbjct: 23 APCCDKLYTCRLCHDTNEDHQLDRFKVKEVQCINCEKLQHAQQT 66
>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 33
Score = 26.2 bits (58), Expect = 0.91
Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 5/31 (16%)
Query: 231 YACKF--C---GKVFPRSANLTRHLRTHTGE 256
+ C + C + F L H+R HTGE
Sbjct: 3 FVCHWGGCSRELRPFKAQYMLVVHMRRHTGE 33
>d1pg5b2 g.41.7.1 (B:105-160) Aspartate carbamoyltransferase,
Regulatory-chain, C-terminal domain {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 56
Score = 26.6 bits (59), Expect = 0.96
Identities = 4/13 (30%), Positives = 7/13 (53%)
Query: 259 YKCKYCERSFSIS 271
+C+YCE +
Sbjct: 36 MRCEYCETIIDEN 48
>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 29
Score = 25.8 bits (56), Expect = 1.0
Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 285 EKPFKCPL--CDRCFGQQTNLDRHLKKH 310
+ P++CP CD+ F + L RH K H
Sbjct: 1 QLPYECPHEGCDKRFSLPSRLKRHEKVH 28
Score = 25.8 bits (56), Expect = 1.2
Identities = 10/24 (41%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
Query: 256 EQPYKCKY--CERSFSISSNLQRH 277
+ PY+C + C++ FS+ S L+RH
Sbjct: 1 QLPYECPHEGCDKRFSLPSRLKRH 24
>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 53
Score = 26.1 bits (57), Expect = 1.4
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 231 YACKFCGKVFPRSANLTRHLRTH 253
C CGKVF + L +H H
Sbjct: 7 LPCGLCGKVFTDANRLRQHEAQH 29
>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain
{Desulfovibrio vulgaris [TaxId: 881]}
Length = 36
Score = 25.4 bits (56), Expect = 1.4
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 280 NIHNKEKPFKCPLC 293
IH E KCP+C
Sbjct: 13 YIHKGEDFEKCPIC 26
>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger
peptide) {Drosophila melanogaster [TaxId: 7227]}
Length = 26
Score = 25.4 bits (55), Expect = 1.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 231 YACKFCGKVFPRSANLTRHLR 251
Y C FC K F R N+T H++
Sbjct: 2 YPCPFCFKEFTRKDNMTAHVK 22
Score = 25.0 bits (54), Expect = 2.1
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 259 YKCKYCERSFSISSNLQRHVRNIH 282
Y C +C + F+ N+ HV+ IH
Sbjct: 2 YPCPFCFKEFTRKDNMTAHVKIIH 25
>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 75
Score = 26.6 bits (58), Expect = 1.7
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 252 THTGEQPYKCKYCERSFSISSNLQRHVRNIHNKE 285
Y+CK+C+ ++ L H+ NIHN+E
Sbjct: 12 PRLQNSTYQCKHCDSKLQSTAELTSHL-NIHNEE 44
Score = 25.8 bits (56), Expect = 2.9
Identities = 14/36 (38%), Positives = 16/36 (44%)
Query: 231 YACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCER 266
Y CK C +A LT HL H E + K ER
Sbjct: 19 YQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER 54
>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 44
Score = 25.5 bits (55), Expect = 1.9
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 254 TGEQPYKCKYCERSFSISSNLQRHV 278
TG +PY+C C + F + RHV
Sbjct: 1 TGIKPYECNICAKRFMWRDSFHRHV 25
>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 37
Score = 25.1 bits (55), Expect = 2.0
Identities = 5/14 (35%), Positives = 6/14 (42%)
Query: 280 NIHNKEKPFKCPLC 293
E P CP+C
Sbjct: 13 YTAVDEAPEYCPVC 26
>d1jj2y_ g.41.8.1 (Y:) Ribosomal protein L37ae {Archaeon Haloarcula
marismortui [TaxId: 2238]}
Length = 73
Score = 26.2 bits (58), Expect = 2.2
Identities = 9/41 (21%), Positives = 14/41 (34%), Gaps = 10/41 (24%)
Query: 228 KDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSF 268
K ++ C CG + R TG + C +C
Sbjct: 25 KKKHKCPVCGF--------KKLKRAGTG--IWMCGHCGYKI 55
>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 28
Score = 24.7 bits (53), Expect = 2.8
Identities = 11/26 (42%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Query: 231 YACKF--CGKVFPRSANLTRHLRTHT 254
Y C F CGK F + L H +HT
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHT 27
>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 37
Score = 24.7 bits (53), Expect = 2.9
Identities = 9/25 (36%), Positives = 11/25 (44%)
Query: 231 YACKFCGKVFPRSANLTRHLRTHTG 255
+ C CGK F R + RH G
Sbjct: 5 FVCSKCGKTFTRRNTMARHADNCAG 29
>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId:
7227]}
Length = 54
Score = 25.1 bits (54), Expect = 3.2
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 278 VRNIHNKEKPFKCPLCDRCFGQQTNLDRHLK 308
R+ E+P CP+C Q NL RHL+
Sbjct: 15 PRSRSQSEQPATCPICYAVIRQSRNLRRHLE 45
>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 24.3 bits (52), Expect = 3.4
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 259 YKCKYCERSFSISSNLQRHVRNIH 282
+ C +C+ + S+L H+R H
Sbjct: 3 FHCPHCDTVIARKSDLGVHLRKQH 26
>d2czra1 c.52.4.1 (A:1-218) TBP-interacting protein {Thermococcus
kodakaraensis [TaxId: 311400]}
Length = 218
Score = 26.8 bits (59), Expect = 4.4
Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Query: 257 QPYKCKYCERSFSISSNLQRHVR 279
Q YKC+ C + I NL+ H+R
Sbjct: 145 QFYKCEECGKYVDI-ENLEAHLR 166
>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 31
Score = 24.1 bits (52), Expect = 5.1
Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 257 QPYKCKY--CERSFSISSNLQRHVRNIHNKE 285
+PY C++ C ++FS +S+ +H H+ E
Sbjct: 1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE 31
>d1wvka_ g.82.1.1 (A:) Expressed protein At2g23090/F21P24.15 {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 86
Score = 25.2 bits (55), Expect = 5.5
Identities = 8/35 (22%), Positives = 13/35 (37%), Gaps = 3/35 (8%)
Query: 259 YKCKYCERSF---SISSNLQRHVRNIHNKEKPFKC 290
+CK C ++F + + H H K C
Sbjct: 46 IQCKVCMQTFICTTSEVKCREHAEAKHPKADVVAC 80
>d2ct5a1 g.37.1.6 (A:8-67) Zinc finger BED domain-containing protein
1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 60
Score = 24.5 bits (53), Expect = 5.7
Identities = 8/49 (16%), Positives = 17/49 (34%), Gaps = 5/49 (10%)
Query: 222 NNTGKPKDRYACKFCGKVFPRSANLTR---HLRTHTGEQPYKCKYCERS 267
+ C+ C S N + HL + E+ C++ + +
Sbjct: 14 EGCILQWKKIYCRICMAQIAYSGNTSNLSYHLEKNHPEE--FCEFVKSN 60
>d1wira_ g.37.1.5 (A:) Protein arginine N-methyltransferase 3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 121
Score = 25.2 bits (55), Expect = 8.9
Identities = 7/28 (25%), Positives = 12/28 (42%)
Query: 256 EQPYKCKYCERSFSISSNLQRHVRNIHN 283
Q C +C+R F+ + H + H
Sbjct: 13 RQHTPCLFCDRLFASAEETFSHCKLEHQ 40
>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 27
Score = 23.1 bits (49), Expect = 9.5
Identities = 11/25 (44%), Positives = 12/25 (48%)
Query: 233 CKFCGKVFPRSANLTRHLRTHTGEQ 257
C C K F L H R HTGE+
Sbjct: 3 CPTCHKKFLSKYYLKVHNRKHTGEK 27
>d2d5ba1 a.27.1.1 (A:349-500) Methionyl-tRNA synthetase (MetRS)
{Thermus thermophilus [TaxId: 274]}
Length = 152
Score = 25.6 bits (55), Expect = 9.9
Identities = 8/37 (21%), Positives = 11/37 (29%), Gaps = 1/37 (2%)
Query: 362 GNRLVQRVSSLSRANYNYYLPHQEDAENNNNINSKKE 398
GN LVQR ++ +P E
Sbjct: 6 GN-LVQRTRAMLFRFAEGRIPEPVAGEELAEGTGLAG 41
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.312 0.130 0.386
Gapped
Lambda K H
0.267 0.0526 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,600,896
Number of extensions: 74596
Number of successful extensions: 331
Number of sequences better than 10.0: 1
Number of HSP's gapped: 320
Number of HSP's successfully gapped: 140
Length of query: 447
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 359
Effective length of database: 1,199,356
Effective search space: 430568804
Effective search space used: 430568804
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 54 (25.0 bits)