Query psy5889
Match_columns 326
No_of_seqs 296 out of 2142
Neff 7.1
Searched_HMMs 46136
Date Fri Aug 16 20:49:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5889.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/5889hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372|consensus 100.0 1.9E-83 4.1E-88 571.0 17.7 286 11-303 2-288 (303)
2 PTZ00480 serine/threonine-prot 100.0 4.8E-77 1E-81 564.1 30.8 302 1-303 1-304 (320)
3 KOG0374|consensus 100.0 1.6E-77 3.6E-82 569.1 26.1 315 6-320 3-326 (331)
4 cd07420 MPP_RdgC Drosophila me 100.0 3.7E-75 8.1E-80 551.9 31.5 285 7-298 2-321 (321)
5 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 4.2E-75 9.1E-80 545.5 29.8 283 12-301 2-285 (285)
6 KOG0373|consensus 100.0 1.1E-76 2.4E-81 520.6 17.4 288 9-303 3-292 (306)
7 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 3.1E-75 6.7E-80 548.4 28.4 289 12-300 2-292 (293)
8 PTZ00244 serine/threonine-prot 100.0 7E-75 1.5E-79 545.6 29.5 288 12-299 4-293 (294)
9 PTZ00239 serine/threonine prot 100.0 1.9E-74 4.1E-79 544.4 31.4 286 12-304 3-290 (303)
10 cd07417 MPP_PP5_C PP5, C-termi 100.0 3.4E-73 7.3E-78 539.1 29.5 292 5-303 9-307 (316)
11 smart00156 PP2Ac Protein phosp 100.0 6.9E-73 1.5E-77 528.0 29.4 270 31-300 1-270 (271)
12 cd07416 MPP_PP2B PP2B, metallo 100.0 1.4E-72 3.1E-77 533.3 31.7 286 11-303 2-300 (305)
13 cd07419 MPP_Bsu1_C Arabidopsis 100.0 2.7E-70 5.8E-75 519.6 29.0 284 16-299 2-311 (311)
14 cd07418 MPP_PP7 PP7, metalloph 100.0 1.7E-68 3.7E-73 513.8 30.8 296 4-300 4-366 (377)
15 KOG0375|consensus 100.0 2.2E-67 4.8E-72 488.7 10.8 271 30-301 60-343 (517)
16 KOG0371|consensus 100.0 2.1E-66 4.5E-71 464.7 13.2 290 10-306 18-308 (319)
17 KOG0377|consensus 100.0 1.8E-58 3.8E-63 438.1 15.3 286 8-300 117-432 (631)
18 KOG0376|consensus 100.0 5.9E-51 1.3E-55 394.0 14.2 274 30-304 182-462 (476)
19 cd00144 MPP_PPP_family phospho 100.0 5.4E-37 1.2E-41 277.3 21.6 214 61-285 1-224 (225)
20 PRK13625 bis(5'-nucleosyl)-tet 100.0 4.6E-27 1E-31 216.7 18.0 122 58-181 1-146 (245)
21 cd07425 MPP_Shelphs Shewanella 99.9 9.2E-27 2E-31 209.7 15.6 176 61-271 1-197 (208)
22 cd07423 MPP_PrpE Bacillus subt 99.9 1E-24 2.2E-29 199.7 19.2 121 58-181 1-143 (234)
23 cd07413 MPP_PA3087 Pseudomonas 99.9 7E-25 1.5E-29 199.4 17.1 115 61-178 2-143 (222)
24 PRK00166 apaH diadenosine tetr 99.9 1.1E-24 2.4E-29 203.6 16.4 217 58-289 1-261 (275)
25 cd07422 MPP_ApaH Escherichia c 99.9 4.4E-25 9.6E-30 204.4 10.0 119 60-182 1-126 (257)
26 PRK11439 pphA serine/threonine 99.9 6.7E-24 1.5E-28 192.3 16.1 115 58-178 17-146 (218)
27 TIGR00668 apaH bis(5'-nucleosy 99.9 3.3E-24 7.3E-29 199.4 13.0 121 58-182 1-128 (279)
28 PHA02239 putative protein phos 99.9 1.4E-23 3E-28 192.3 15.8 171 58-270 1-218 (235)
29 cd07421 MPP_Rhilphs Rhilph pho 99.9 4E-23 8.6E-28 192.7 16.5 187 59-274 3-282 (304)
30 cd07424 MPP_PrpA_PrpB PrpA and 99.9 7.4E-23 1.6E-27 183.9 15.9 169 58-257 1-184 (207)
31 PRK09968 serine/threonine-spec 99.9 8E-22 1.7E-26 178.8 13.1 115 58-178 15-144 (218)
32 PF00149 Metallophos: Calcineu 99.5 3.8E-13 8.3E-18 111.6 11.3 159 58-252 1-199 (200)
33 cd00841 MPP_YfcE Escherichia c 99.3 6.6E-11 1.4E-15 100.9 15.3 82 59-177 1-85 (155)
34 PRK09453 phosphodiesterase; Pr 99.3 1E-10 2.2E-15 102.9 15.3 69 58-130 1-77 (182)
35 PF12850 Metallophos_2: Calcin 99.3 8.2E-11 1.8E-15 99.5 13.6 152 58-287 1-152 (156)
36 TIGR00040 yfcE phosphoesterase 99.2 4.8E-10 1E-14 96.2 14.2 63 58-129 1-64 (158)
37 cd07379 MPP_239FB Homo sapiens 99.1 5.4E-10 1.2E-14 93.4 11.3 118 59-257 1-120 (135)
38 cd07388 MPP_Tt1561 Thermus the 99.1 3.7E-09 7.9E-14 96.4 17.2 71 58-129 5-75 (224)
39 COG0639 ApaH Diadenosine tetra 99.0 1.7E-10 3.7E-15 95.5 4.6 143 131-274 3-154 (155)
40 cd07394 MPP_Vps29 Homo sapiens 99.0 2.5E-08 5.4E-13 87.8 16.0 110 59-254 1-119 (178)
41 cd07397 MPP_DevT Myxococcus xa 99.0 4.9E-09 1.1E-13 96.2 11.5 156 59-253 2-208 (238)
42 cd07392 MPP_PAE1087 Pyrobaculu 98.9 1.7E-08 3.8E-13 87.8 12.0 65 60-130 1-66 (188)
43 cd00838 MPP_superfamily metall 98.9 1.5E-08 3.3E-13 81.5 10.5 118 61-258 1-120 (131)
44 PRK05340 UDP-2,3-diacylglucosa 98.8 2.2E-08 4.8E-13 92.0 9.8 212 58-297 1-238 (241)
45 cd07404 MPP_MS158 Microscilla 98.8 3E-08 6.5E-13 85.5 8.8 67 60-129 1-68 (166)
46 cd07403 MPP_TTHA0053 Thermus t 98.7 2.1E-07 4.5E-12 77.6 11.3 107 61-257 1-107 (129)
47 cd07399 MPP_YvnB Bacillus subt 98.6 1.9E-06 4.1E-11 77.9 15.9 193 59-299 2-213 (214)
48 TIGR03729 acc_ester putative p 98.6 4.1E-07 8.9E-12 83.4 11.2 68 59-129 1-74 (239)
49 cd07400 MPP_YydB Bacillus subt 98.6 8.7E-07 1.9E-11 74.3 11.7 118 60-258 1-130 (144)
50 COG0622 Predicted phosphoester 98.6 3.6E-06 7.7E-11 73.8 15.4 160 58-301 2-167 (172)
51 TIGR01854 lipid_A_lpxH UDP-2,3 98.5 3.9E-07 8.5E-12 83.2 8.7 205 60-290 1-230 (231)
52 COG2129 Predicted phosphoester 98.4 1.9E-05 4.1E-10 71.4 17.4 210 57-296 3-223 (226)
53 PRK11148 cyclic 3',5'-adenosin 98.3 7.4E-05 1.6E-09 69.9 18.1 71 57-129 14-98 (275)
54 cd07385 MPP_YkuE_C Bacillus su 98.2 2.6E-06 5.7E-11 76.5 5.8 70 58-129 2-76 (223)
55 PRK11340 phosphodiesterase Yae 98.2 3.4E-06 7.4E-11 79.0 6.4 70 58-129 50-125 (271)
56 cd07402 MPP_GpdQ Enterobacter 98.2 4.7E-05 1E-09 69.1 13.7 67 59-129 1-83 (240)
57 PRK04036 DNA polymerase II sma 98.2 4.6E-05 1E-09 77.5 14.9 113 57-177 243-388 (504)
58 cd07395 MPP_CSTP1 Homo sapiens 98.1 0.00011 2.4E-09 68.0 16.1 71 59-129 6-99 (262)
59 cd00844 MPP_Dbr1_N Dbr1 RNA la 98.1 3.5E-05 7.5E-10 72.0 11.7 70 60-129 1-86 (262)
60 cd07393 MPP_DR1119 Deinococcus 98.0 9E-05 2E-09 67.7 13.0 64 60-128 1-83 (232)
61 COG2908 Uncharacterized protei 98.0 1.7E-05 3.6E-10 72.3 7.8 199 61-292 1-230 (237)
62 cd07383 MPP_Dcr2 Saccharomyces 98.0 0.00014 3E-09 64.6 13.7 70 58-127 3-87 (199)
63 KOG0376|consensus 98.0 8.7E-07 1.9E-11 87.4 -1.1 239 30-275 14-299 (476)
64 cd07396 MPP_Nbla03831 Homo sap 97.8 3.5E-05 7.7E-10 71.8 6.8 73 59-131 2-88 (267)
65 TIGR00619 sbcd exonuclease Sbc 97.8 3.3E-05 7.1E-10 71.7 6.4 72 58-129 1-88 (253)
66 cd08165 MPP_MPPE1 human MPPE1 97.8 0.00019 4.2E-09 61.7 10.0 46 84-129 38-89 (156)
67 PHA02546 47 endonuclease subun 97.8 4.5E-05 9.8E-10 73.8 6.1 72 58-129 1-89 (340)
68 cd07398 MPP_YbbF-LpxH Escheric 97.6 0.00014 3.1E-09 64.9 7.0 29 229-257 177-205 (217)
69 cd07391 MPP_PF1019 Pyrococcus 97.6 0.00015 3.2E-09 63.2 6.7 56 74-129 31-88 (172)
70 cd00840 MPP_Mre11_N Mre11 nucl 97.5 0.00012 2.7E-09 65.3 5.3 73 59-131 1-91 (223)
71 cd00839 MPP_PAPs purple acid p 97.5 0.00046 9.9E-09 64.7 9.3 70 58-131 5-83 (294)
72 cd07401 MPP_TMEM62_N Homo sapi 97.5 0.00033 7.3E-09 65.0 8.3 28 233-260 190-217 (256)
73 PRK10966 exonuclease subunit S 97.5 0.00019 4.2E-09 71.1 5.9 72 58-130 1-88 (407)
74 TIGR00024 SbcD_rel_arch putati 97.4 0.00033 7.1E-09 64.0 6.9 69 58-130 15-103 (225)
75 cd07390 MPP_AQ1575 Aquifex aeo 97.4 0.00025 5.5E-09 61.5 5.5 43 84-131 42-84 (168)
76 PF06874 FBPase_2: Firmicute f 97.2 0.013 2.8E-07 60.2 15.6 69 229-299 507-585 (640)
77 COG1409 Icc Predicted phosphoh 97.2 0.0011 2.4E-08 61.2 7.5 74 58-132 1-81 (301)
78 cd07380 MPP_CWF19_N Schizosacc 97.2 0.0033 7.2E-08 53.9 9.5 119 61-252 1-121 (150)
79 TIGR00583 mre11 DNA repair pro 97.1 0.0009 1.9E-08 66.3 6.5 54 57-110 3-68 (405)
80 PF14582 Metallophos_3: Metall 96.9 0.0031 6.7E-08 57.4 7.3 73 58-130 6-103 (255)
81 cd07386 MPP_DNA_pol_II_small_a 96.8 0.0017 3.7E-08 59.6 5.2 68 61-130 2-95 (243)
82 COG1408 Predicted phosphohydro 96.7 0.003 6.5E-08 59.7 5.6 72 58-131 45-120 (284)
83 KOG3325|consensus 96.6 0.03 6.5E-07 47.7 10.2 116 60-258 3-124 (183)
84 cd07384 MPP_Cdc1_like Saccharo 96.5 0.0038 8.1E-08 54.5 5.0 48 83-130 44-101 (171)
85 cd08163 MPP_Cdc1 Saccharomyces 96.5 0.052 1.1E-06 50.5 12.7 31 228-260 203-233 (257)
86 cd08166 MPP_Cdc1_like_1 unchar 96.4 0.005 1.1E-07 55.0 4.8 46 84-129 42-93 (195)
87 cd00845 MPP_UshA_N_like Escher 96.1 0.008 1.7E-07 55.1 4.8 66 59-129 2-82 (252)
88 COG4186 Predicted phosphoester 95.9 0.023 5E-07 48.9 6.2 44 83-130 44-87 (186)
89 COG0420 SbcD DNA repair exonuc 95.9 0.017 3.7E-07 56.7 6.4 74 58-131 1-90 (390)
90 cd08164 MPP_Ted1 Saccharomyces 95.5 0.022 4.7E-07 50.9 4.9 65 65-129 24-111 (193)
91 PLN02533 probable purple acid 95.3 0.019 4.2E-07 57.3 4.4 71 57-130 139-212 (427)
92 COG1311 HYS2 Archaeal DNA poly 95.1 0.59 1.3E-05 47.0 13.9 205 59-299 227-472 (481)
93 cd00842 MPP_ASMase acid sphing 95.0 0.21 4.6E-06 46.9 10.4 61 71-131 53-124 (296)
94 cd07410 MPP_CpdB_N Escherichia 95.0 0.028 6.1E-07 52.5 4.2 65 59-128 2-94 (277)
95 cd07387 MPP_PolD2_C PolD2 (DNA 94.6 0.96 2.1E-05 42.2 13.4 50 242-296 204-256 (257)
96 COG1407 Predicted ICC-like pho 94.6 0.094 2E-06 48.1 6.4 101 56-179 18-140 (235)
97 cd07378 MPP_ACP5 Homo sapiens 94.5 0.07 1.5E-06 49.5 5.6 70 59-129 2-83 (277)
98 PF08321 PPP5: PPP5 TPR repeat 94.3 0.11 2.5E-06 41.0 5.4 46 5-56 50-95 (95)
99 cd07408 MPP_SA0022_N Staphyloc 93.9 0.086 1.9E-06 48.8 4.9 65 59-128 2-81 (257)
100 cd07412 MPP_YhcR_N Bacillus su 93.1 0.088 1.9E-06 49.7 3.5 66 59-129 2-88 (288)
101 KOG0918|consensus 91.9 0.018 3.9E-07 56.1 -2.7 192 86-289 49-250 (476)
102 KOG2863|consensus 91.8 0.42 9.1E-06 46.4 6.3 74 58-131 1-90 (456)
103 KOG3662|consensus 91.7 0.27 5.8E-06 48.6 5.0 56 73-128 81-143 (410)
104 COG1768 Predicted phosphohydro 91.4 0.38 8.3E-06 42.5 5.1 44 84-131 43-88 (230)
105 cd07411 MPP_SoxB_N Thermus the 91.2 0.32 7E-06 45.1 4.9 65 59-129 2-95 (264)
106 PRK09419 bifunctional 2',3'-cy 89.5 0.38 8.3E-06 54.0 4.4 66 58-128 661-735 (1163)
107 KOG2476|consensus 89.3 0.75 1.6E-05 46.0 5.7 69 57-126 5-75 (528)
108 cd07409 MPP_CD73_N CD73 ecto-5 89.0 0.72 1.6E-05 43.3 5.3 66 59-129 2-94 (281)
109 cd07406 MPP_CG11883_N Drosophi 87.6 0.88 1.9E-05 42.1 4.9 64 60-128 3-82 (257)
110 PF04042 DNA_pol_E_B: DNA poly 86.8 1.2 2.6E-05 39.5 5.1 72 60-131 1-93 (209)
111 cd07407 MPP_YHR202W_N Saccharo 83.7 1.1 2.4E-05 42.3 3.5 66 59-129 7-97 (282)
112 COG0737 UshA 5'-nucleotidase/2 83.3 1.1 2.5E-05 45.7 3.7 69 56-129 25-115 (517)
113 TIGR00282 metallophosphoestera 83.0 2.2 4.7E-05 40.0 5.1 67 58-129 1-71 (266)
114 KOG1378|consensus 82.6 4.4 9.5E-05 40.7 7.2 34 231-264 322-355 (452)
115 cd08162 MPP_PhoA_N Synechococc 81.5 1.9 4.1E-05 41.3 4.2 64 60-128 3-90 (313)
116 cd07405 MPP_UshA_N Escherichia 80.8 1.7 3.7E-05 40.9 3.6 66 59-129 2-87 (285)
117 KOG3339|consensus 79.8 20 0.00043 32.0 9.5 85 86-175 40-140 (211)
118 KOG1432|consensus 79.4 2.5 5.5E-05 40.9 4.2 47 83-130 99-148 (379)
119 PRK09420 cpdB bifunctional 2', 76.8 2.9 6.2E-05 44.2 4.1 68 56-128 24-121 (649)
120 TIGR01390 CycNucDiestase 2',3' 76.1 2.8 6E-05 44.1 3.8 66 58-128 3-98 (626)
121 KOG3947|consensus 75.9 6.2 0.00013 37.2 5.5 94 30-131 25-128 (305)
122 PRK09419 bifunctional 2',3'-cy 74.8 2.9 6.4E-05 47.1 3.8 66 58-128 42-138 (1163)
123 COG3855 Fbp Uncharacterized pr 72.6 2.2 4.8E-05 42.8 1.9 41 86-131 192-232 (648)
124 PTZ00235 DNA polymerase epsilo 70.8 12 0.00026 35.6 6.3 72 58-129 28-122 (291)
125 PRK11907 bifunctional 2',3'-cy 69.1 5.8 0.00012 43.0 4.2 67 57-128 115-212 (814)
126 cd07382 MPP_DR1281 Deinococcus 68.4 9.3 0.0002 35.6 5.0 66 59-129 1-70 (255)
127 PTZ00422 glideosome-associated 67.6 7.5 0.00016 38.6 4.4 72 58-129 27-109 (394)
128 COG3855 Fbp Uncharacterized pr 67.3 20 0.00043 36.3 7.2 48 229-277 514-571 (648)
129 TIGR01530 nadN NAD pyrophospha 66.9 10 0.00022 39.3 5.4 40 84-128 49-93 (550)
130 PRK09558 ushA bifunctional UDP 66.1 7 0.00015 40.3 4.1 68 57-129 34-121 (551)
131 PF14164 YqzH: YqzH-like prote 61.3 29 0.00063 25.4 5.3 46 7-52 1-47 (64)
132 COG0634 Hpt Hypoxanthine-guani 55.4 91 0.002 27.5 8.4 86 27-119 8-124 (178)
133 PRK09418 bifunctional 2',3'-cy 54.5 14 0.00031 39.9 4.1 67 57-128 39-141 (780)
134 KOG2679|consensus 53.1 7.5 0.00016 36.7 1.4 67 59-129 45-126 (336)
135 PF12641 Flavodoxin_3: Flavodo 46.2 95 0.0021 26.7 7.2 102 61-181 2-116 (160)
136 PF02875 Mur_ligase_C: Mur lig 45.1 59 0.0013 24.5 5.2 69 58-126 12-82 (91)
137 PF06874 FBPase_2: Firmicute f 41.0 25 0.00053 36.9 3.1 41 86-131 186-226 (640)
138 COG5526 Lysozyme family protei 37.5 63 0.0014 27.9 4.5 63 1-69 1-67 (191)
139 TIGR00282 metallophosphoestera 34.8 27 0.00059 32.8 2.2 39 87-129 2-41 (266)
140 KOG2310|consensus 31.6 1.1E+02 0.0023 31.8 5.8 49 58-106 14-74 (646)
141 smart00854 PGA_cap Bacterial c 28.0 1.2E+02 0.0027 27.3 5.3 40 233-274 197-236 (239)
142 cd07382 MPP_DR1281 Deinococcus 27.7 60 0.0013 30.2 3.2 37 87-124 1-37 (255)
143 PRK10773 murF UDP-N-acetylmura 26.3 1.9E+02 0.0041 28.9 6.7 66 58-124 325-392 (453)
144 COG4320 Uncharacterized protei 24.2 48 0.001 32.1 1.8 59 47-113 46-108 (410)
145 PF15007 CEP44: Centrosomal sp 24.0 1.1E+02 0.0023 25.7 3.7 83 65-163 1-87 (131)
146 PF13258 DUF4049: Domain of un 23.8 2.9E+02 0.0064 25.7 6.7 59 116-180 127-187 (318)
147 PHA02762 hypothetical protein; 21.7 2.9E+02 0.0063 19.5 4.8 23 283-305 31-53 (62)
No 1
>KOG0372|consensus
Probab=100.00 E-value=1.9e-83 Score=571.05 Aligned_cols=286 Identities=46% Similarity=0.902 Sum_probs=278.2
Q ss_pred hHHHHHHHHHcCCCCCccccCCHHHHHHHHHHHHHHHHhCCCceeecCCeeEEecCCCCHHHHHHhHHcCCCCCCceEEE
Q psy5889 11 SLDNVIKKLSRGVRPGRMINLDQADIVIMIRAARDIFMAQPMFLYLTTPLKICGDIHGQYNDLLGLFSYGKPPPTSTYLF 90 (326)
Q Consensus 11 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~il~~~g~~~~~~~vf 90 (326)
+++..|+++.++ + .+++.++..||.+++++|.+||++..+++|++|+||||||+.||+.+|+..|.++.++|+|
T Consensus 2 dldr~ie~L~~~-~-----li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~YLF 75 (303)
T KOG0372|consen 2 DLDRQIEQLRRC-E-----LIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNYLF 75 (303)
T ss_pred cHHHHHHHHHhc-C-----CCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCceEe
Confidence 578999999998 4 7899999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhhhhhCchHHHHHHh-hHHHHHHHHhhhccCceEEEEcCe
Q psy5889 91 LGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANINKIYGFYEECKRRY-DIKLWKKFTDCFNCMPVAAVVDHK 169 (326)
Q Consensus 91 LGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~-~~~~~~~~~~~f~~LP~~~~i~~~ 169 (326)
||||||||.+|+|++.+|++||++||++|++||||||.+.+++.|||++||.+|| +..+|+.+.+.|+.||++|+|+++
T Consensus 76 LGDyVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid~k 155 (303)
T KOG0372|consen 76 LGDYVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIIDGK 155 (303)
T ss_pred ecchhccccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheecCc
Confidence 9999999999999999999999999999999999999999999999999999999 789999999999999999999999
Q ss_pred EEEecCCCCCCCCCccccccCCCCCCCCCCCcccceecCCCCCccCCcccCCCCCccccChHHHHHHHHhcCCceEEEec
Q psy5889 170 IFCCHGGLSPQLTSFSQITNLPRPTEVPEEGLLVDLLWSDPEENISGWGHNDRGVSYTFGADMVHEFLKKFNIDLVCRAH 249 (326)
Q Consensus 170 il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~g~~Fg~~~~~~fl~~~~l~~iIRgH 249 (326)
+||||||+||.+.++|+|+.+.|..++|..+.++|+|||||. ...+|.-+|||+|+.||.+++++|++.||+++|+|+|
T Consensus 156 ifCVHGGlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPe-e~~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~RaH 234 (303)
T KOG0372|consen 156 IFCVHGGLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPE-EGPGWGLSPRGAGYLFGEDVVESFLEANGLSLICRAH 234 (303)
T ss_pred EEEEcCCCCcchhhHHHHHHhhccccCCCCCcchheeccCcc-cCCCcccCCCCccccccHHHHHHHHHhCChHHHHHHH
Confidence 999999999999999999999999999999999999999998 5569999999999999999999999999999999999
Q ss_pred cccccCeEEEcCceEEEEEccCCCCCCCCCeEEEEEEcCCCceEEEEEecCCcc
Q psy5889 250 QVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMIVDENLTCSFHIMKPKKKI 303 (326)
Q Consensus 250 ~~~~~G~~~~~~~~~iTvfSa~~y~~~~~N~gavl~i~~~~~~~~~~~~~~~~~ 303 (326)
|.+.+||++.++++++|||||||||+.++|.||||.++++....|.+|+..+.+
T Consensus 235 QLv~eGyk~~F~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFeaa~~~ 288 (303)
T KOG0372|consen 235 QLVMEGYKWHFDEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFEAAPQE 288 (303)
T ss_pred HHHHhhHHHhcCCceEEEecCCchhhhcCChHHheeeccccCcceEeeecchhh
Confidence 999999999999999999999999999999999999999999999999987754
No 2
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=4.8e-77 Score=564.11 Aligned_cols=302 Identities=63% Similarity=1.200 Sum_probs=285.5
Q ss_pred CccCCCCChhhHHHHHHHHHcCC--CCCccccCCHHHHHHHHHHHHHHHHhCCCceeecCCeeEEecCCCCHHHHHHhHH
Q psy5889 1 MASHGAINQESLDNVIKKLSRGV--RPGRMINLDQADIVIMIRAARDIFMAQPMFLYLTTPLKICGDIHGQYNDLLGLFS 78 (326)
Q Consensus 1 ~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~il~ 78 (326)
||-+++ ...+++++|+++++.. .++....++++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+
T Consensus 1 ~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~ 79 (320)
T PTZ00480 1 MAKDKK-GEIDVDNIIERLLSVRGSKPGKNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFE 79 (320)
T ss_pred CCcccc-cCcCHHHHHHHHHhccccCccccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHH
Confidence 555443 3345999999999863 2345567999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhhhhhCchHHHHHHhhHHHHHHHHhhhc
Q psy5889 79 YGKPPPTSTYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANINKIYGFYEECKRRYDIKLWKKFTDCFN 158 (326)
Q Consensus 79 ~~g~~~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~ 158 (326)
..++++.++|||||||||||++++||+.+|+++|+.+|.++++||||||...++..|||..|+..+|+..+|..+.++|+
T Consensus 80 ~~g~~~~~~ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~~~l~~~~~~~F~ 159 (320)
T PTZ00480 80 YGGYPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYTIKLWKTFTDCFN 159 (320)
T ss_pred hcCCCCcceEEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCceEEEEcCeEEEecCCCCCCCCCccccccCCCCCCCCCCCcccceecCCCCCccCCcccCCCCCccccChHHHHHHHH
Q psy5889 159 CMPVAAVVDHKIFCCHGGLSPQLTSFSQITNLPRPTEVPEEGLLVDLLWSDPEENISGWGHNDRGVSYTFGADMVHEFLK 238 (326)
Q Consensus 159 ~LP~~~~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~g~~Fg~~~~~~fl~ 238 (326)
.||++|++++++|||||||+|.+.++++|+++.||.+.+++++++|+|||||.....+|.+++||.|+.||++++++||+
T Consensus 160 ~LPlaAiI~~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~ 239 (320)
T PTZ00480 160 CLPVAALIDEKILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLK 239 (320)
T ss_pred hccHhheecCcEEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999778899999999999999999999999
Q ss_pred hcCCceEEEeccccccCeEEEcCceEEEEEccCCCCCCCCCeEEEEEEcCCCceEEEEEecCCcc
Q psy5889 239 KFNIDLVCRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMIVDENLTCSFHIMKPKKKI 303 (326)
Q Consensus 239 ~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa~~y~~~~~N~gavl~i~~~~~~~~~~~~~~~~~ 303 (326)
+||+++||||||++++||+++++++|+|||||||||+..+|+||+|.|++++.++|++|+|.+++
T Consensus 240 ~n~l~~IiR~Hq~v~~G~~~~~~~~~iTvFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~ 304 (320)
T PTZ00480 240 KHELDLICRAHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSFQILKPAEQG 304 (320)
T ss_pred hCCCcEEEEcCccccCceEEeCCCcEEEEeCCcccCCCCCccEEEEEECCCCcEeEEEecCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999987754
No 3
>KOG0374|consensus
Probab=100.00 E-value=1.6e-77 Score=569.12 Aligned_cols=315 Identities=58% Similarity=1.066 Sum_probs=291.6
Q ss_pred CCChhhHHHHHHHHHcCCC--CC--ccccCCHHHHHHHHHHHHHHHHhCCCceeecCCeeEEecCCCCHHHHHHhHHcCC
Q psy5889 6 AINQESLDNVIKKLSRGVR--PG--RMINLDQADIVIMIRAARDIFMAQPMFLYLTTPLKICGDIHGQYNDLLGLFSYGK 81 (326)
Q Consensus 6 ~~~~~~~~~~i~~~~~~~~--~~--~~~~~~~~~~~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~il~~~g 81 (326)
++....++++|.++++... .. ....++++++.+||..+.++|..+|+++++++||.|+||||||+.||+++|...|
T Consensus 3 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g 82 (331)
T KOG0374|consen 3 SMASLDLDELIRKLLSVGNKKTEKKRQVPLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLG 82 (331)
T ss_pred ccchhhHHHHHHHHhhccccCCCcccceeccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcC
Confidence 3556778888998888532 22 2456999999999999999999999999999999999999999999999999999
Q ss_pred -CCCCceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhhhhhCchHHHHHHhh-HHHHHHHHhhhcc
Q psy5889 82 -PPPTSTYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANINKIYGFYEECKRRYD-IKLWKKFTDCFNC 159 (326)
Q Consensus 82 -~~~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~f~~ 159 (326)
+|+..+|||||||||||++|+|++.+|+++|++||++|++||||||.+.++..|||++||..+|+ ..+|+.|++.|+.
T Consensus 83 ~~pp~~~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~ 162 (331)
T KOG0374|consen 83 SFPPDQNYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNC 162 (331)
T ss_pred CCCCcccEEEecccccCCccceEEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999998 7999999999999
Q ss_pred CceEEEEcCeEEEecCCCCCCCCCccccccCCCCCCCCCCCcccceecCCCCCccCCcccCCCCCccccChHHHHHHHHh
Q psy5889 160 MPVAAVVDHKIFCCHGGLSPQLTSFSQITNLPRPTEVPEEGLLVDLLWSDPEENISGWGHNDRGVSYTFGADMVHEFLKK 239 (326)
Q Consensus 160 LP~~~~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~g~~Fg~~~~~~fl~~ 239 (326)
||++|+|+++++|+|||++|.+.++++|++|.||.+.++.++++|++||||.....+|.+|.||.++.||++++++||++
T Consensus 163 mp~~a~i~~kI~CmhGGlsp~l~~~~~i~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~ 242 (331)
T KOG0374|consen 163 LPLAALIDGKILCMHGGLSPHLKSLDQIRAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKK 242 (331)
T ss_pred CchhheecceEEEecCCCChhhcChHHHhhccCCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998899999999999999999999999999
Q ss_pred cCCceEEEeccccccCeEEEcCceEEEEEccCCCCCCCCCeEEEEEEcCCCceEEEEEecC---CccccccccCCCCCCC
Q psy5889 240 FNIDLVCRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMIVDENLTCSFHIMKPK---KKILEFLSSVMSGEGS 316 (326)
Q Consensus 240 ~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa~~y~~~~~N~gavl~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 316 (326)
+++++||||||++++||+++.+++++||||||+||++++|.||+|.|++++.++|.+++|. .+........+...+.
T Consensus 243 ~~ldlivRaHqvv~dGyeffa~r~lvTIFSAP~Ycg~~~n~gavm~Vd~~l~~sf~~l~p~~~~~~~~~~~~~~~~~~~~ 322 (331)
T KOG0374|consen 243 LDLDLIVRAHQVVEDGYEFFAGRKLVTIFSAPNYCGEFDNAGAVMRVDKNLKCSFVILRPEGGIDKDKIEALGVGSDKKA 322 (331)
T ss_pred hCcceEEEcCccccccceEecCceEEEEecCchhccccCCceEEEEECCCCeEEEEEecccccccccccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999994 4544444444444444
Q ss_pred Cccc
Q psy5889 317 SSSI 320 (326)
Q Consensus 317 ~~~~ 320 (326)
+.+.
T Consensus 323 ~~~~ 326 (331)
T KOG0374|consen 323 ILST 326 (331)
T ss_pred cccc
Confidence 4443
No 4
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=3.7e-75 Score=551.89 Aligned_cols=285 Identities=34% Similarity=0.637 Sum_probs=261.6
Q ss_pred CChhhHHHHHHHHHcCCCCCccccCCHHHHHHHHHHHHHHHHhCCCceeecC----CeeEEecCCCCHHHHHHhHHcCCC
Q psy5889 7 INQESLDNVIKKLSRGVRPGRMINLDQADIVIMIRAARDIFMAQPMFLYLTT----PLKICGDIHGQYNDLLGLFSYGKP 82 (326)
Q Consensus 7 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~i~~----~i~viGDIHG~~~~L~~il~~~g~ 82 (326)
++-++++++|+++++. . .++++++.+||++|+++|++||++++++. |++||||||||+++|.++|+..|+
T Consensus 2 ~~~~~~~~~i~~~~~~-~-----~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g~ 75 (321)
T cd07420 2 LTKDHIDALIEAFKEK-Q-----LLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGL 75 (321)
T ss_pred CCHHHHHHHHHHHHcc-C-----CCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcCC
Confidence 4567899999999987 3 58999999999999999999999999976 899999999999999999999998
Q ss_pred CC-CceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhhhhhCchHHHHHHhh---HHHHHHHHhhhc
Q psy5889 83 PP-TSTYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANINKIYGFYEECKRRYD---IKLWKKFTDCFN 158 (326)
Q Consensus 83 ~~-~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~---~~~~~~~~~~f~ 158 (326)
++ .++|||||||||||++|+||+.+|++||+.+|+++++||||||.+.++..|||.+||..+|+ ..+|..+.++|+
T Consensus 76 ~~~~~~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F~ 155 (321)
T cd07420 76 PSPENPYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVFS 155 (321)
T ss_pred CCccceEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHHH
Confidence 85 46799999999999999999999999999999999999999999999999999999999995 789999999999
Q ss_pred cCceEEEEcCeEEEecCCCCCCCCCccccccCCCCCC-----CCC----------------------CCcccceecCCCC
Q psy5889 159 CMPVAAVVDHKIFCCHGGLSPQLTSFSQITNLPRPTE-----VPE----------------------EGLLVDLLWSDPE 211 (326)
Q Consensus 159 ~LP~~~~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~-----~~~----------------------~~~~~dllWsdP~ 211 (326)
.||++|++++++|||||||+| ..++++|++++|+.. +|. .+++.|+|||||.
T Consensus 156 ~LPlaaii~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP~ 234 (321)
T cd07420 156 WLPLATIIDNKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSDPK 234 (321)
T ss_pred hCCceEEEcCCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeeecCCc
Confidence 999999999999999999997 568999999887421 111 1467899999998
Q ss_pred CccCCcccCCCCCccccChHHHHHHHHhcCCceEEEeccccccCeEEEcCceEEEEEccCCCCCCCCCeEEEEEEcCCCc
Q psy5889 212 ENISGWGHNDRGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMIVDENLT 291 (326)
Q Consensus 212 ~~~~~~~~~~rg~g~~Fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa~~y~~~~~N~gavl~i~~~~~ 291 (326)
.....|.+++||.|+.||++++++||++|++++||||||++++||++.++++|+|||||||||+.++|+||+|.++++.+
T Consensus 235 ~~~~~~~~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~~~~~iTvFSa~nY~~~~~N~gavl~i~~~~~ 314 (321)
T cd07420 235 AQKGCKPNTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRGAYIKLGPDLT 314 (321)
T ss_pred cCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhhcceEEecCCeEEEEecCCccCCCCCccEEEEEECCCCc
Confidence 65555778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEe
Q psy5889 292 CSFHIMK 298 (326)
Q Consensus 292 ~~~~~~~ 298 (326)
++|++|.
T Consensus 315 ~~f~~~~ 321 (321)
T cd07420 315 PHFVQYQ 321 (321)
T ss_pred eeEEEeC
Confidence 9998863
No 5
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=4.2e-75 Score=545.53 Aligned_cols=283 Identities=48% Similarity=0.939 Sum_probs=272.6
Q ss_pred HHHHHHHHHcCCCCCccccCCHHHHHHHHHHHHHHHHhCCCceeecCCeeEEecCCCCHHHHHHhHHcCCCCCCceEEEe
Q psy5889 12 LDNVIKKLSRGVRPGRMINLDQADIVIMIRAARDIFMAQPMFLYLTTPLKICGDIHGQYNDLLGLFSYGKPPPTSTYLFL 91 (326)
Q Consensus 12 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~il~~~g~~~~~~~vfL 91 (326)
++++|+++++. . .++++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..++++.++||||
T Consensus 2 ~~~~~~~~~~~-~-----~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfL 75 (285)
T cd07415 2 LDKWIEQLKKC-E-----LLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFL 75 (285)
T ss_pred HHHHHHHHHcc-C-----CCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEE
Confidence 67899999986 2 58999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhhhhhCchHHHHHHhh-HHHHHHHHhhhccCceEEEEcCeE
Q psy5889 92 GDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANINKIYGFYEECKRRYD-IKLWKKFTDCFNCMPVAAVVDHKI 170 (326)
Q Consensus 92 GD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LP~~~~i~~~i 170 (326)
|||||||++|+||+.+|+++|+.+|.++++||||||.+.++..|||..||..+|+ ..+|..+.++|+.||++|++++++
T Consensus 76 GDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~~i 155 (285)
T cd07415 76 GDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDNQI 155 (285)
T ss_pred eEECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCCeE
Confidence 9999999999999999999999999999999999999999999999999999996 589999999999999999999999
Q ss_pred EEecCCCCCCCCCccccccCCCCCCCCCCCcccceecCCCCCccCCcccCCCCCccccChHHHHHHHHhcCCceEEEecc
Q psy5889 171 FCCHGGLSPQLTSFSQITNLPRPTEVPEEGLLVDLLWSDPEENISGWGHNDRGVSYTFGADMVHEFLKKFNIDLVCRAHQ 250 (326)
Q Consensus 171 l~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~g~~Fg~~~~~~fl~~~~l~~iIRgH~ 250 (326)
+||||||+|.+.++++|++++||.+.+.++++.|+|||||.. ..+|.+++||.|+.||++++++||++||+++||||||
T Consensus 156 ~cvHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~-~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He 234 (285)
T cd07415 156 FCVHGGLSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDD-IEGWGISPRGAGYLFGQDVVEEFNHNNGLTLICRAHQ 234 (285)
T ss_pred EEEcCCCCCCcccHHHhhcccCCCCCCCCCCccceEecCCCc-cCCCCcCCCCCccccCHHHHHHHHHHCCCeEEEEcCc
Confidence 999999999999999999999999999999999999999985 4789999999999999999999999999999999999
Q ss_pred ccccCeEEEcCceEEEEEccCCCCCCCCCeEEEEEEcCCCceEEEEEecCC
Q psy5889 251 VVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMIVDENLTCSFHIMKPKK 301 (326)
Q Consensus 251 ~~~~G~~~~~~~~~iTvfSa~~y~~~~~N~gavl~i~~~~~~~~~~~~~~~ 301 (326)
++++||++.++++|+|||||||||+.++|+||+|.|+++.+++|++|+|.+
T Consensus 235 ~~~~G~~~~~~~~~~TvfSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~~ 285 (285)
T cd07415 235 LVMEGYQWMFDDKLVTVWSAPNYCYRCGNVASIMELDEHLKRSFKVFEAAP 285 (285)
T ss_pred cccceEEEecCCcEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeccCC
Confidence 999999999999999999999999999999999999999999999999864
No 6
>KOG0373|consensus
Probab=100.00 E-value=1.1e-76 Score=520.64 Aligned_cols=288 Identities=41% Similarity=0.836 Sum_probs=278.6
Q ss_pred hhhHHHHHHHHHcCCCCCccccCCHHHHHHHHHHHHHHHHhCCCceeecCCeeEEecCCCCHHHHHHhHHcCCCCCCceE
Q psy5889 9 QESLDNVIKKLSRGVRPGRMINLDQADIVIMIRAARDIFMAQPMFLYLTTPLKICGDIHGQYNDLLGLFSYGKPPPTSTY 88 (326)
Q Consensus 9 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~il~~~g~~~~~~~ 88 (326)
..++++.|+.+..+ + .++++++..||+.++++|..|.++.+++.|++|+||||||+.||+++|+..|-.|.++|
T Consensus 3 ~~d~d~wi~~vk~c-k-----yLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~tnY 76 (306)
T KOG0373|consen 3 KMDLDQWIETVKKC-K-----YLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPDTNY 76 (306)
T ss_pred cCCHHHHHHHHHHc-C-----CCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCCcce
Confidence 34589999999998 5 79999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhhhhhCchHHHHHHh-hHHHHHHHHhhhccCceEEEEc
Q psy5889 89 LFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANINKIYGFYEECKRRY-DIKLWKKFTDCFNCMPVAAVVD 167 (326)
Q Consensus 89 vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~-~~~~~~~~~~~f~~LP~~~~i~ 167 (326)
||+|||||||.+|+|++.+|+.||.+||.++.+||||||.+.+...|||++||..+| +..+|+.+.++|+.|+++|+|+
T Consensus 77 iFmGDfVDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaAiID 156 (306)
T KOG0373|consen 77 IFMGDFVDRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAAIID 156 (306)
T ss_pred EEeccccccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999 6899999999999999999999
Q ss_pred CeEEEecCCCCCCCCCccccccCCCCCCCCCCCcccceecCCCCCccCCcccCCCCCccccChHHHHHHHHhcCCceEEE
Q psy5889 168 HKIFCCHGGLSPQLTSFSQITNLPRPTEVPEEGLLVDLLWSDPEENISGWGHNDRGVSYTFGADMVHEFLKKFNIDLVCR 247 (326)
Q Consensus 168 ~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~g~~Fg~~~~~~fl~~~~l~~iIR 247 (326)
++++|||||+||++.++|+|+-+.|..++|..+.+||++||||+ +++.|.-++||+|+.||.+++.+|...|++++|+|
T Consensus 157 ~~vLCVHGGLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPe-dve~W~vSpRGAGwlFGskVt~eF~~iN~L~LicR 235 (306)
T KOG0373|consen 157 EKVLCVHGGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPE-DVETWAVSPRGAGWLFGSKVTTEFNHINNLNLICR 235 (306)
T ss_pred CcEEEEcCCCCccceeHHHHHhHHhhccCCCCCCccceeccChh-hhhhheeCCCCcceeechhhhHHHHhccchHHHHh
Confidence 99999999999999999999999999999999999999999999 68999999999999999999999999999999999
Q ss_pred eccccccCeEEEcCce-EEEEEccCCCCCCCCCeEEEEEEcCCCceEEEEEecCCcc
Q psy5889 248 AHQVVEEGYEFFADKK-LVTLFSAPNYCGEFDNAGAMMIVDENLTCSFHIMKPKKKI 303 (326)
Q Consensus 248 gH~~~~~G~~~~~~~~-~iTvfSa~~y~~~~~N~gavl~i~~~~~~~~~~~~~~~~~ 303 (326)
+||.+++||++.+++| ++|||||||||.+++|.|+||.++++++.+++.|...+..
T Consensus 236 aHQLV~EG~KymF~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F~avpd~ 292 (306)
T KOG0373|consen 236 AHQLVQEGFKYMFDEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIFSAVPDN 292 (306)
T ss_pred HHHHHHhhHHhccCCCCEEEEecCCchhhhccCeeeEEEecccCCccceeeeecCCc
Confidence 9999999999988887 9999999999999999999999999999999999877643
No 7
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=3.1e-75 Score=548.39 Aligned_cols=289 Identities=67% Similarity=1.276 Sum_probs=277.3
Q ss_pred HHHHHHHHHcCC--CCCccccCCHHHHHHHHHHHHHHHHhCCCceeecCCeeEEecCCCCHHHHHHhHHcCCCCCCceEE
Q psy5889 12 LDNVIKKLSRGV--RPGRMINLDQADIVIMIRAARDIFMAQPMFLYLTTPLKICGDIHGQYNDLLGLFSYGKPPPTSTYL 89 (326)
Q Consensus 12 ~~~~i~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~il~~~g~~~~~~~v 89 (326)
++++|+++++.. ..+....++++++.+||++|+++|++||++++++++++||||||||+.+|.++|+..++++.++||
T Consensus 2 ~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~l 81 (293)
T cd07414 2 IDSIIERLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 81 (293)
T ss_pred HHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceEE
Confidence 678899998853 234566899999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhhhhhCchHHHHHHhhHHHHHHHHhhhccCceEEEEcCe
Q psy5889 90 FLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANINKIYGFYEECKRRYDIKLWKKFTDCFNCMPVAAVVDHK 169 (326)
Q Consensus 90 fLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP~~~~i~~~ 169 (326)
|||||||||++|+|++.+|+++|+.+|.++++||||||.+.++..|||..|+..+|+..+|..+.++|+.||++|+++++
T Consensus 82 fLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaa~i~~~ 161 (293)
T cd07414 82 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIIDEK 161 (293)
T ss_pred EEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhhHHHHHHHHHHHHHhHHHHhhCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCCCCccccccCCCCCCCCCCCcccceecCCCCCccCCcccCCCCCccccChHHHHHHHHhcCCceEEEec
Q psy5889 170 IFCCHGGLSPQLTSFSQITNLPRPTEVPEEGLLVDLLWSDPEENISGWGHNDRGVSYTFGADMVHEFLKKFNIDLVCRAH 249 (326)
Q Consensus 170 il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~g~~Fg~~~~~~fl~~~~l~~iIRgH 249 (326)
++|||||++|.+.++++|++++||.+.++.++++|+|||||.....+|.+++||.|+.||++++++||++||+++|||||
T Consensus 162 i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~H 241 (293)
T cd07414 162 IFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICRAH 241 (293)
T ss_pred EEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEECC
Confidence 99999999999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred cccccCeEEEcCceEEEEEccCCCCCCCCCeEEEEEEcCCCceEEEEEecC
Q psy5889 250 QVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMIVDENLTCSFHIMKPK 300 (326)
Q Consensus 250 ~~~~~G~~~~~~~~~iTvfSa~~y~~~~~N~gavl~i~~~~~~~~~~~~~~ 300 (326)
|++++||++.++++|+|||||||||+.++|+||+|.|+++..++|++|+|.
T Consensus 242 e~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~~~ 292 (293)
T cd07414 242 QVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 292 (293)
T ss_pred ccccCeEEEeCCCcEEEEecCCcccCCCCceEEEEEECCCCcEEEEEecCC
Confidence 999999999999999999999999999999999999999999999999875
No 8
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=7e-75 Score=545.56 Aligned_cols=288 Identities=55% Similarity=1.045 Sum_probs=274.7
Q ss_pred HHHHHHHHHcCCC--CCccccCCHHHHHHHHHHHHHHHHhCCCceeecCCeeEEecCCCCHHHHHHhHHcCCCCCCceEE
Q psy5889 12 LDNVIKKLSRGVR--PGRMINLDQADIVIMIRAARDIFMAQPMFLYLTTPLKICGDIHGQYNDLLGLFSYGKPPPTSTYL 89 (326)
Q Consensus 12 ~~~~i~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~il~~~g~~~~~~~v 89 (326)
++++|.++++... .+....++++++.+||++++++|++||+++++++|++||||||||+.+|.++|+..++++.++|+
T Consensus 4 ~~~~i~~~~~~~~~~~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~~~l 83 (294)
T PTZ00244 4 VQTLIEKMLTVKGNRTQRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYSNYL 83 (294)
T ss_pred HHHHHHHHHhcccCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCcccEE
Confidence 6788888888532 23455799999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhhhhhCchHHHHHHhhHHHHHHHHhhhccCceEEEEcCe
Q psy5889 90 FLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANINKIYGFYEECKRRYDIKLWKKFTDCFNCMPVAAVVDHK 169 (326)
Q Consensus 90 fLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP~~~~i~~~ 169 (326)
|||||||||++|+||+.+++++|+.+|.+++++|||||.+.++..|||.+++..+|+..+|..+.++|+.||++++++++
T Consensus 84 fLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaaii~~~ 163 (294)
T PTZ00244 84 FLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYNIKLFKAFTDVFNTMPVCCVISEK 163 (294)
T ss_pred EeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhhHHHHHHHHHHHHhCchheEecCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCCCCccccccCCCCCCCCCCCcccceecCCCCCccCCcccCCCCCccccChHHHHHHHHhcCCceEEEec
Q psy5889 170 IFCCHGGLSPQLTSFSQITNLPRPTEVPEEGLLVDLLWSDPEENISGWGHNDRGVSYTFGADMVHEFLKKFNIDLVCRAH 249 (326)
Q Consensus 170 il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~g~~Fg~~~~~~fl~~~~l~~iIRgH 249 (326)
++|||||++|.+.+++++++++||.+.++.++++|++||||.....+|.+++||.|+.||++++++||++||+++|||||
T Consensus 164 il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~H 243 (294)
T PTZ00244 164 IICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLIVRAH 243 (294)
T ss_pred eEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEEEEcC
Confidence 99999999999999999999999999999999999999999977789999999999999999999999999999999999
Q ss_pred cccccCeEEEcCceEEEEEccCCCCCCCCCeEEEEEEcCCCceEEEEEec
Q psy5889 250 QVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMIVDENLTCSFHIMKP 299 (326)
Q Consensus 250 ~~~~~G~~~~~~~~~iTvfSa~~y~~~~~N~gavl~i~~~~~~~~~~~~~ 299 (326)
|++++||+++++++|+|||||||||+..+|+||+|.|+++..++|++|+.
T Consensus 244 q~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~f~~~~~ 293 (294)
T PTZ00244 244 QVMERGYGFFASRQLVTVFSAPNYCGEFDNDAAVMNIDDKLQCSFLIIPA 293 (294)
T ss_pred ccccCceEEcCCCeEEEEeCCccccCCCCceEEEEEECCCCcEeEEEeec
Confidence 99999999999999999999999999999999999999999999998754
No 9
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=1.9e-74 Score=544.36 Aligned_cols=286 Identities=42% Similarity=0.861 Sum_probs=272.9
Q ss_pred HHHHHHHHHcCCCCCccccCCHHHHHHHHHHHHHHHHhCCCceeecCCeeEEecCCCCHHHHHHhHHcCCCCCCceEEEe
Q psy5889 12 LDNVIKKLSRGVRPGRMINLDQADIVIMIRAARDIFMAQPMFLYLTTPLKICGDIHGQYNDLLGLFSYGKPPPTSTYLFL 91 (326)
Q Consensus 12 ~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~il~~~g~~~~~~~vfL 91 (326)
++++|+.+++. . .++++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..+.++.++|+||
T Consensus 3 ~~~~~~~~~~~-~-----~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfL 76 (303)
T PTZ00239 3 IDRHIATLLNG-G-----CLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNANYIFI 76 (303)
T ss_pred HHHHHHHHHcc-C-----CCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEe
Confidence 78899999886 2 58999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhhhhhCchHHHHHHhh-HHHHHHHHhhhccCceEEEEcCeE
Q psy5889 92 GDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANINKIYGFYEECKRRYD-IKLWKKFTDCFNCMPVAAVVDHKI 170 (326)
Q Consensus 92 GD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LP~~~~i~~~i 170 (326)
|||||||++|+||+.+|+++|+.+|.++++||||||.+.++..|||..|+..+|+ ..+|+.+.++|+.||++|++++++
T Consensus 77 GDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~~i 156 (303)
T PTZ00239 77 GDFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEGQI 156 (303)
T ss_pred eeEcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcCeE
Confidence 9999999999999999999999999999999999999999999999999999995 579999999999999999999999
Q ss_pred EEecCCCCCCCCCccccccCCCCCCCCCCCcccceecCCCCCccCCcccCCCCCccccChHHHHHHHHhcCCceEEEecc
Q psy5889 171 FCCHGGLSPQLTSFSQITNLPRPTEVPEEGLLVDLLWSDPEENISGWGHNDRGVSYTFGADMVHEFLKKFNIDLVCRAHQ 250 (326)
Q Consensus 171 l~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~g~~Fg~~~~~~fl~~~~l~~iIRgH~ 250 (326)
+|||||++|.+.++++|+++.||.+.|.++.++|+|||||. ...+|.+++||.|+.||++++++||++||+++||||||
T Consensus 157 ~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~-~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He 235 (303)
T PTZ00239 157 LCVHGGLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPE-EVEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLICRAHQ 235 (303)
T ss_pred EEEcCccCcccccHhhhccccCCCCCCCCCCceeeEecCcc-ccCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcCh
Confidence 99999999999999999999999999999999999999998 46789999999999999999999999999999999999
Q ss_pred ccccCeEEEcC-ceEEEEEccCCCCCCCCCeEEEEEEcCCCceEEEEEecCCccc
Q psy5889 251 VVEEGYEFFAD-KKLVTLFSAPNYCGEFDNAGAMMIVDENLTCSFHIMKPKKKIL 304 (326)
Q Consensus 251 ~~~~G~~~~~~-~~~iTvfSa~~y~~~~~N~gavl~i~~~~~~~~~~~~~~~~~~ 304 (326)
++++||++.++ ++|+|||||||||+..+|+||+|.++++.+++|++|+|.+++.
T Consensus 236 ~~~~G~~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~~~~~~~~ 290 (303)
T PTZ00239 236 LVMEGYKYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTFKEVPESA 290 (303)
T ss_pred hhccceEEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEeeCCCccc
Confidence 99999998664 5699999999999999999999999999999999999988764
No 10
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=3.4e-73 Score=539.06 Aligned_cols=292 Identities=36% Similarity=0.715 Sum_probs=275.6
Q ss_pred CCCChhhHHHHHHHHHcCCCCCccccCCHHHHHHHHHHHHHHHHhCCCceeecCC----eeEEecCCCCHHHHHHhHHcC
Q psy5889 5 GAINQESLDNVIKKLSRGVRPGRMINLDQADIVIMIRAARDIFMAQPMFLYLTTP----LKICGDIHGQYNDLLGLFSYG 80 (326)
Q Consensus 5 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~i~~~----i~viGDIHG~~~~L~~il~~~ 80 (326)
+.++.+.++++++++... + .++++++.+||++|+++|++||++++++.| ++||||||||+.+|.++|+..
T Consensus 9 ~~i~~~~~~~~~~~~~~~-~-----~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~~ 82 (316)
T cd07417 9 EKVTLEFVKEMIEWFKDQ-K-----KLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELN 82 (316)
T ss_pred CCCCHHHHHHHHHHHHcc-C-----CCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHhc
Confidence 458889999999999987 3 589999999999999999999999999866 999999999999999999999
Q ss_pred CCCCC-ceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhhhhhCchHHHHHHhhHHHHHHHHhhhcc
Q psy5889 81 KPPPT-STYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANINKIYGFYEECKRRYDIKLWKKFTDCFNC 159 (326)
Q Consensus 81 g~~~~-~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~ 159 (326)
++++. ++|||||||||||++|+||+.+|+++|+.+|.++++||||||.+.++..|||..++..+|+..+|..+.++|++
T Consensus 83 g~~~~~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~~~l~~~~~~~f~~ 162 (316)
T cd07417 83 GLPSETNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYNEQMFDLFSEVFNW 162 (316)
T ss_pred CCCCccCeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhcccHHHHHHHHHHHHh
Confidence 98765 57999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEcCeEEEecCCC-CCCCCCccccccCCCCCCCCCCCcccceecCCCCCccCCcccCCCCCccccChHHHHHHHH
Q psy5889 160 MPVAAVVDHKIFCCHGGL-SPQLTSFSQITNLPRPTEVPEEGLLVDLLWSDPEENISGWGHNDRGVSYTFGADMVHEFLK 238 (326)
Q Consensus 160 LP~~~~i~~~il~vHgGi-~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~g~~Fg~~~~~~fl~ 238 (326)
||++++++++++|||||+ +|...+++++++++|+.+.+.+++++|+|||||.. ..+|.+++||.|+.||++++++||+
T Consensus 163 LPlaaii~~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~-~~~~~~s~Rg~g~~fg~~~~~~Fl~ 241 (316)
T cd07417 163 LPLAHLINGKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQP-QPGRSPSKRGVGCQFGPDVTKRFLE 241 (316)
T ss_pred chHhheeCCeEEEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCC-CCCCCccCCCCceEeCHHHHHHHHH
Confidence 999999999999999999 56678999999999999888899999999999984 4689999999999999999999999
Q ss_pred hcCCceEEEeccccccCeEEEcCceEEEEEccCCCCCCCCCeEEEEEEcC-CCceEEEEEecCCcc
Q psy5889 239 KFNIDLVCRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMIVDE-NLTCSFHIMKPKKKI 303 (326)
Q Consensus 239 ~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa~~y~~~~~N~gavl~i~~-~~~~~~~~~~~~~~~ 303 (326)
+||+++||||||++++||++.++++|+|||||||||+.++|+||+|.|++ +++++|++|+|.++.
T Consensus 242 ~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~Y~~~~~N~ga~~~i~~~~~~~~~~~~~~~~~~ 307 (316)
T cd07417 242 ENNLEYIIRSHEVKDEGYEVEHDGKCITVFSAPNYCDQMGNKGAFIRITGSDLKPKFTQFEAVPHP 307 (316)
T ss_pred HcCCcEEEECCcccceeEEEecCCeEEEEeCCccccCCCCcceEEEEEeCCCceeeeEeccCCCCC
Confidence 99999999999999999999999999999999999999999999999999 899999999987754
No 11
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=6.9e-73 Score=527.98 Aligned_cols=270 Identities=55% Similarity=1.058 Sum_probs=262.6
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCceeecCCeeEEecCCCCHHHHHHhHHcCCCCCCceEEEeccccCCCCCcHHHHHHHHH
Q psy5889 31 LDQADIVIMIRAARDIFMAQPMFLYLTTPLKICGDIHGQYNDLLGLFSYGKPPPTSTYLFLGDYVDRGKHSIETICLLFA 110 (326)
Q Consensus 31 ~~~~~~~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~lL~~ 110 (326)
++++++.+||++|+++|++||+++++++|++||||||||+.+|.++|+..+.++.++|||||||||||++|+||+.++++
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~ 80 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFA 80 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcEEEECCCchhhhhhhhhCchHHHHHHhhHHHHHHHHhhhccCceEEEEcCeEEEecCCCCCCCCCccccccC
Q psy5889 111 YKIRYPDNIYLLRGNHESANINKIYGFYEECKRRYDIKLWKKFTDCFNCMPVAAVVDHKIFCCHGGLSPQLTSFSQITNL 190 (326)
Q Consensus 111 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP~~~~i~~~il~vHgGi~p~~~~l~~i~~i 190 (326)
+|+.+|.++++||||||.+.++..|||..++..+|+..+|..+.++|+.||++++++++++|||||++|.+.++++|+++
T Consensus 81 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~i 160 (271)
T smart00156 81 LKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYGEEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRKL 160 (271)
T ss_pred HHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcCHHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccceecCCCCCccCCcccCCCCCccccChHHHHHHHHhcCCceEEEeccccccCeEEEcCceEEEEEcc
Q psy5889 191 PRPTEVPEEGLLVDLLWSDPEENISGWGHNDRGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKKLVTLFSA 270 (326)
Q Consensus 191 ~rp~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~g~~Fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa 270 (326)
+||.+.+.+++++|++||||.....+|.+|+||.|+.||++++++||++||+++||||||++++||+++++++|+|||||
T Consensus 161 ~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa 240 (271)
T smart00156 161 KRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFHDRKLVTIFSA 240 (271)
T ss_pred cCCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEecCCcEEEEECC
Confidence 99999999999999999999877889999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCeEEEEEEcCCCceEEEEEecC
Q psy5889 271 PNYCGEFDNAGAMMIVDENLTCSFHIMKPK 300 (326)
Q Consensus 271 ~~y~~~~~N~gavl~i~~~~~~~~~~~~~~ 300 (326)
||||+.++|+||++.++++.+++|++|+|.
T Consensus 241 ~~y~~~~~n~~a~~~i~~~~~~~~~~~~~~ 270 (271)
T smart00156 241 PNYCGRFGNKAAVLKVDKDLKLSFEQFKPG 270 (271)
T ss_pred cccccCCCceEEEEEECCCCcEEEEEecCC
Confidence 999999999999999999999999999875
No 12
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=1.4e-72 Score=533.32 Aligned_cols=286 Identities=38% Similarity=0.756 Sum_probs=269.7
Q ss_pred hHHHHHHHHHcCCCCCccccCCHHHHHHHHHHHHHHHHhCCCceeecCCeeEEecCCCCHHHHHHhHHcCCCCCCceEEE
Q psy5889 11 SLDNVIKKLSRGVRPGRMINLDQADIVIMIRAARDIFMAQPMFLYLTTPLKICGDIHGQYNDLLGLFSYGKPPPTSTYLF 90 (326)
Q Consensus 11 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~il~~~g~~~~~~~vf 90 (326)
.++-+++.+++.. .++++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..+.++.++|||
T Consensus 2 ~~~~~~~~~~~~~------~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylF 75 (305)
T cd07416 2 RIDVLKAHFMREG------RLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRYLF 75 (305)
T ss_pred CHHHHHHHHHcCC------CCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEE
Confidence 4677888888763 5899999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhhhhhCchHHHHHHhhHHHHHHHHhhhccCceEEEEcCeE
Q psy5889 91 LGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANINKIYGFYEECKRRYDIKLWKKFTDCFNCMPVAAVVDHKI 170 (326)
Q Consensus 91 LGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP~~~~i~~~i 170 (326)
||||||||++|+||+.+|+++|+.+|.++++||||||.+.++..|||..++..+|+..+|..+.++|+.||+++++++++
T Consensus 76 LGDyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~~~l~~~~~~~f~~LPlaaii~~~i 155 (305)
T cd07416 76 LGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMEAFDCLPLAALMNQQF 155 (305)
T ss_pred ECCccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhccHHHHHHHHHHHhhccceeEEcCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCCCCCccccccCCCCCCCCCCCcccceecCCCCCccC------CcccC-CCCCccccChHHHHHHHHhcCCc
Q psy5889 171 FCCHGGLSPQLTSFSQITNLPRPTEVPEEGLLVDLLWSDPEENIS------GWGHN-DRGVSYTFGADMVHEFLKKFNID 243 (326)
Q Consensus 171 l~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdP~~~~~------~~~~~-~rg~g~~Fg~~~~~~fl~~~~l~ 243 (326)
+|||||++|.+.++++|++++||.+.+..++++|+|||||..... +|.++ +||.|+.||++++++||++||++
T Consensus 156 ~~vHGGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l~ 235 (305)
T cd07416 156 LCVHGGLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNLL 235 (305)
T ss_pred EEEcCCCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCCe
Confidence 999999999999999999999999999999999999999975432 47765 89999999999999999999999
Q ss_pred eEEEeccccccCeEEEcCc------eEEEEEccCCCCCCCCCeEEEEEEcCCCceEEEEEecCCcc
Q psy5889 244 LVCRAHQVVEEGYEFFADK------KLVTLFSAPNYCGEFDNAGAMMIVDENLTCSFHIMKPKKKI 303 (326)
Q Consensus 244 ~iIRgH~~~~~G~~~~~~~------~~iTvfSa~~y~~~~~N~gavl~i~~~~~~~~~~~~~~~~~ 303 (326)
+||||||++++||++++++ +|+|||||||||+.++|+||+|.++++. ++|++|.|.+..
T Consensus 236 ~iiR~He~~~~G~~~~~~~~~~~~~~~iTvFSa~~Y~~~~~N~~a~l~i~~~~-~~~~~~~~~~~~ 300 (305)
T cd07416 236 SIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSPHP 300 (305)
T ss_pred EEEEeccccccceEEecCCCcCCCCcEEEEeCCccccCCCCceEEEEEEcCCc-ceEEEecCCCCC
Confidence 9999999999999998876 8999999999999999999999999875 799999998865
No 13
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=2.7e-70 Score=519.56 Aligned_cols=284 Identities=45% Similarity=0.835 Sum_probs=262.1
Q ss_pred HHHHHcCCCC----CccccCCHHHHHHHHHHHHHHHHhCCCceeecCCeeEEecCCCCHHHHHHhHHcCCCCCC------
Q psy5889 16 IKKLSRGVRP----GRMINLDQADIVIMIRAARDIFMAQPMFLYLTTPLKICGDIHGQYNDLLGLFSYGKPPPT------ 85 (326)
Q Consensus 16 i~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~il~~~g~~~~------ 85 (326)
|++++..... ..+..++++++.+||++|+++|++||+++++++|++||||||||+++|.++|+..++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~ 81 (311)
T cd07419 2 ITHLLKPRIWKPPTDRRFFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDI 81 (311)
T ss_pred hHHhcCcccccCccccccCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCCC
Confidence 5666664322 346789999999999999999999999999999999999999999999999999988754
Q ss_pred --ceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhhhhhCchHHHHHHhhH------HHHHHHHhhh
Q psy5889 86 --STYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANINKIYGFYEECKRRYDI------KLWKKFTDCF 157 (326)
Q Consensus 86 --~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~------~~~~~~~~~f 157 (326)
.+|||||||||||++|+||+.+|+++++.+|.++++||||||.+.++..|||..++..+|+. .+|..+.++|
T Consensus 82 ~~~~~vfLGDyVDRGp~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f 161 (311)
T cd07419 82 EYIDYLFLGDYVDRGSNSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLF 161 (311)
T ss_pred cCceEEEECCccCCCCChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999988853 6999999999
Q ss_pred ccCceEEEEcCeEEEecCCCCCCCCCccccccCCCCC-CCCCCCcccceecCCCCCc--cCCcccCC---CCCc--cccC
Q psy5889 158 NCMPVAAVVDHKIFCCHGGLSPQLTSFSQITNLPRPT-EVPEEGLLVDLLWSDPEEN--ISGWGHND---RGVS--YTFG 229 (326)
Q Consensus 158 ~~LP~~~~i~~~il~vHgGi~p~~~~l~~i~~i~rp~-~~~~~~~~~dllWsdP~~~--~~~~~~~~---rg~g--~~Fg 229 (326)
+.||++++++++++|||||++|.+.++++|+++.||. ..+..+++.|++||||... ..+|.+++ ||.| +.||
T Consensus 162 ~~LPl~avi~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~fg 241 (311)
T cd07419 162 EWLPLAAIIEDKILCMHGGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKFG 241 (311)
T ss_pred HhCchhheecccEEEEccCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeEC
Confidence 9999999999999999999999999999999999997 4456788999999999854 45777776 9998 7999
Q ss_pred hHHHHHHHHhcCCceEEEeccccccCeEEEcCceEEEEEccCCCCCCCCCeEEEEEEcCCCceEEEEEec
Q psy5889 230 ADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMIVDENLTCSFHIMKP 299 (326)
Q Consensus 230 ~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa~~y~~~~~N~gavl~i~~~~~~~~~~~~~ 299 (326)
++++++||++||+++||||||++++||++.++++|+|||||||||+.++|+||++.++++.++++++++|
T Consensus 242 ~~~~~~Fl~~n~l~~iiRgHe~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~~ai~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 242 PDRVHRFLEENDLQMIIRAHECVMDGFERFAQGKLITLFSATNYCGTAGNAGAILVLGRDLTIIPKLIHP 311 (311)
T ss_pred HHHHHHHHHHCCCeEEEEechhhhCCeEEeCCCeEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999987
No 14
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=1.7e-68 Score=513.76 Aligned_cols=296 Identities=33% Similarity=0.621 Sum_probs=263.3
Q ss_pred CCCCChhhHHHHHHHHHcCCC----CCccccCCHHHHHHHHHHHHHHHHhCCCceeec----CCeeEEecCCCCHHHHHH
Q psy5889 4 HGAINQESLDNVIKKLSRGVR----PGRMINLDQADIVIMIRAARDIFMAQPMFLYLT----TPLKICGDIHGQYNDLLG 75 (326)
Q Consensus 4 ~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~i~----~~i~viGDIHG~~~~L~~ 75 (326)
-++++.+.++.+|+++....+ ......++.+++.+||++|+++|++||++++++ .|++||||||||+.+|.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ 83 (377)
T cd07418 4 GGALTNEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLF 83 (377)
T ss_pred CCccCHHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHH
Confidence 356889999999999977532 122346899999999999999999999999998 799999999999999999
Q ss_pred hHHcCCCCCC-ceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhhhhhCchHHHHHHhh---HHHHH
Q psy5889 76 LFSYGKPPPT-STYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANINKIYGFYEECKRRYD---IKLWK 151 (326)
Q Consensus 76 il~~~g~~~~-~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~---~~~~~ 151 (326)
+|+..++++. .+|||||||||||++|+||+.+|+++|+.+|.+|++||||||.+.++..|||.+++..+|+ ..+|+
T Consensus 84 ll~~~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~ 163 (377)
T cd07418 84 LLEDAGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYR 163 (377)
T ss_pred HHHHhCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHH
Confidence 9999999875 4599999999999999999999999999999999999999999999999999999999994 47999
Q ss_pred HHHhhhccCceEEEEcCeEEEecCCCC---------------------------CCCCCccccccCCCCC-CCCCCC---
Q psy5889 152 KFTDCFNCMPVAAVVDHKIFCCHGGLS---------------------------PQLTSFSQITNLPRPT-EVPEEG--- 200 (326)
Q Consensus 152 ~~~~~f~~LP~~~~i~~~il~vHgGi~---------------------------p~~~~l~~i~~i~rp~-~~~~~~--- 200 (326)
.+.++|++||++++++++++||||||+ |.+.++++|++++||. +++..+
T Consensus 164 ~~~~~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~ 243 (377)
T cd07418 164 KCLGCFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNL 243 (377)
T ss_pred HHHHHHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCccc
Confidence 999999999999999999999999994 4567899999999974 555444
Q ss_pred cccceecCCCCCccCCcccC-CCCCccccChHHHHHHHHhcCCceEEEeccc------------cccCeEEEcC---ceE
Q psy5889 201 LLVDLLWSDPEENISGWGHN-DRGVSYTFGADMVHEFLKKFNIDLVCRAHQV------------VEEGYEFFAD---KKL 264 (326)
Q Consensus 201 ~~~dllWsdP~~~~~~~~~~-~rg~g~~Fg~~~~~~fl~~~~l~~iIRgH~~------------~~~G~~~~~~---~~~ 264 (326)
+++|+|||||.. ..+|.++ +||.|+.||++++++||++|++++||||||+ +++||++.++ ++|
T Consensus 244 i~~dlLWSDP~~-~~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~~~~~l 322 (377)
T cd07418 244 IPGDVLWSDPSL-TPGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVESGKL 322 (377)
T ss_pred cceeeEeeCCcc-CCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccCCCCcE
Confidence 478999999985 4677665 7999999999999999999999999999996 6799999887 999
Q ss_pred EEEEccCCCC------CCCCCeEEEEEEcCCC--ceEEEEEecC
Q psy5889 265 VTLFSAPNYC------GEFDNAGAMMIVDENL--TCSFHIMKPK 300 (326)
Q Consensus 265 iTvfSa~~y~------~~~~N~gavl~i~~~~--~~~~~~~~~~ 300 (326)
+||||||||| +.++|+||++.++.+. ..+|++|+.+
T Consensus 323 iTvFSa~nY~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~~ 366 (377)
T cd07418 323 ITLFSAPDYPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEAV 366 (377)
T ss_pred EEEecCCccccccccccccCcceEEEEEecCCCCCccceEeecc
Confidence 9999999999 6789999999997754 6788887655
No 15
>KOG0375|consensus
Probab=100.00 E-value=2.2e-67 Score=488.74 Aligned_cols=271 Identities=37% Similarity=0.767 Sum_probs=254.1
Q ss_pred cCCHHHHHHHHHHHHHHHHhCCCceeecCCeeEEecCCCCHHHHHHhHHcCCCCCCceEEEeccccCCCCCcHHHHHHHH
Q psy5889 30 NLDQADIVIMIRAARDIFMAQPMFLYLTTPLKICGDIHGQYNDLLGLFSYGKPPPTSTYLFLGDYVDRGKHSIETICLLF 109 (326)
Q Consensus 30 ~~~~~~~~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~lL~ 109 (326)
+++++..+.|+.+++.+|++|++++++++||+|+|||||||.||+++|+..|.|..++|+|||||||||.+|+||+.+|.
T Consensus 60 rl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLGDYVDRGyFSiECvlYLw 139 (517)
T KOG0375|consen 60 RLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLW 139 (517)
T ss_pred chhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeeccccccceeeeehHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcCCCcEEEECCCchhhhhhhhhCchHHHHHHhhHHHHHHHHhhhccCceEEEEcCeEEEecCCCCCCCCCcccccc
Q psy5889 110 AYKIRYPDNIYLLRGNHESANINKIYGFYEECKRRYDIKLWKKFTDCFNCMPVAAVVDHKIFCCHGGLSPQLTSFSQITN 189 (326)
Q Consensus 110 ~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP~~~~i~~~il~vHgGi~p~~~~l~~i~~ 189 (326)
+||+.||..+++||||||++.+...+.|.+||..+|+.++|+...+.|+.||+||+.+++++|||||+||.+.++++|++
T Consensus 140 sLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKYse~vYdaCmesFd~LPLAAlmNqQflCVHGGlSPEi~tl~DIr~ 219 (517)
T KOG0375|consen 140 SLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMESFDCLPLAALMNQQFLCVHGGLSPEIHTLDDIRK 219 (517)
T ss_pred HHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhccHHHHHHHHHHhccchHHHHhcCceEEecCCCCcccccHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCcccceecCCCCCcc------CCcccC-CCCCccccChHHHHHHHHhcCCceEEEeccccccCeEEEcCc
Q psy5889 190 LPRPTEVPEEGLLVDLLWSDPEENI------SGWGHN-DRGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADK 262 (326)
Q Consensus 190 i~rp~~~~~~~~~~dllWsdP~~~~------~~~~~~-~rg~g~~Fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~ 262 (326)
++|..++|.-+++||||||||.++. ..|..| -||++|.|...|+++||+.||+--|||+||.++.||+.+.+.
T Consensus 220 l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRAHEAQDaGYRMYrks 299 (517)
T KOG0375|consen 220 LDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKS 299 (517)
T ss_pred hhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhhhhhhhhhhhhhhhhcc
Confidence 9999999999999999999997532 335444 699999999999999999999999999999999999988766
Q ss_pred e------EEEEEccCCCCCCCCCeEEEEEEcCCCceEEEEEecCC
Q psy5889 263 K------LVTLFSAPNYCGEFDNAGAMMIVDENLTCSFHIMKPKK 301 (326)
Q Consensus 263 ~------~iTvfSa~~y~~~~~N~gavl~i~~~~~~~~~~~~~~~ 301 (326)
+ +|||||||||.+.++|+||||+...+ ...+.+|.=+|
T Consensus 300 qttGFPSLiTiFSAPNYLDvYnNKAAvLKYEnN-VMNIRQFncSP 343 (517)
T KOG0375|consen 300 QTTGFPSLITIFSAPNYLDVYNNKAAVLKYENN-VMNIRQFNCSP 343 (517)
T ss_pred cccCCchheeeecCCchhhhhccHHHHhhhhcc-cceeeccCCCC
Confidence 4 89999999999999999999998765 34566664433
No 16
>KOG0371|consensus
Probab=100.00 E-value=2.1e-66 Score=464.73 Aligned_cols=290 Identities=44% Similarity=0.853 Sum_probs=279.3
Q ss_pred hhHHHHHHHHHcCCCCCccccCCHHHHHHHHHHHHHHHHhCCCceeecCCeeEEecCCCCHHHHHHhHHcCCCCCCceEE
Q psy5889 10 ESLDNVIKKLSRGVRPGRMINLDQADIVIMIRAARDIFMAQPMFLYLTTPLKICGDIHGQYNDLLGLFSYGKPPPTSTYL 89 (326)
Q Consensus 10 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~il~~~g~~~~~~~v 89 (326)
.+++..|+++..+ + .+++.++..+|+.|+++|.+|.++..+..|++|+||+||||++|.++|+..|..|+..|+
T Consensus 18 ~~vd~~ie~L~~c-k-----~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdtnyl 91 (319)
T KOG0371|consen 18 LDVDPWIEQLYKC-K-----PLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDTNYL 91 (319)
T ss_pred cccccchHHHHhc-C-----CCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCccee
Confidence 3577888899888 4 689999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhhhhhCchHHHHHHh-hHHHHHHHHhhhccCceEEEEcC
Q psy5889 90 FLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANINKIYGFYEECKRRY-DIKLWKKFTDCFNCMPVAAVVDH 168 (326)
Q Consensus 90 fLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~-~~~~~~~~~~~f~~LP~~~~i~~ 168 (326)
|+|||||||++|.|++.+|.++|++||++|.+||||||.+.+...|||++||.++| +..+|+.|.+.|+.+|++|.|++
T Consensus 92 fmGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali~~ 171 (319)
T KOG0371|consen 92 FMGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIES 171 (319)
T ss_pred eeeeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999 78999999999999999999999
Q ss_pred eEEEecCCCCCCCCCccccccCCCCCCCCCCCcccceecCCCCCccCCcccCCCCCccccChHHHHHHHHhcCCceEEEe
Q psy5889 169 KIFCCHGGLSPQLTSFSQITNLPRPTEVPEEGLLVDLLWSDPEENISGWGHNDRGVSYTFGADMVHEFLKKFNIDLVCRA 248 (326)
Q Consensus 169 ~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~g~~Fg~~~~~~fl~~~~l~~iIRg 248 (326)
+++|+|||++|.+.+++.++.+.|..++|.++.+||+|||||+ +.-+|..++||.|+.||.+..++|-.+||+++|-|+
T Consensus 172 ~ifc~HGgLspsi~tld~~r~~dr~~evphegpmcDlLwsdpd-dr~gwg~sprgag~tfg~di~~~fn~~n~lslisRa 250 (319)
T KOG0371|consen 172 KIFCLHGGLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDISEQFNHKNGLSLISRA 250 (319)
T ss_pred ceeeccCCcCcccchHHHHHHHHHhhcccCCCChhheeccCcc-cCCCCCCCCCCCCcccchhhHHHhhccCCchHhHHH
Confidence 9999999999999999999999999999999999999999998 678999999999999999999999999999999999
Q ss_pred ccccccCeEEEcCceEEEEEccCCCCCCCCCeEEEEEEcCCCceEEEEEecCCccccc
Q psy5889 249 HQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMIVDENLTCSFHIMKPKKKILEF 306 (326)
Q Consensus 249 H~~~~~G~~~~~~~~~iTvfSa~~y~~~~~N~gavl~i~~~~~~~~~~~~~~~~~~~~ 306 (326)
||-+.+||.+.+...++|+|||||||+.++|.+|++.++++....|.+|+|++.+.++
T Consensus 251 hqlvm~g~nW~~~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~q~~psp~k~e~ 308 (319)
T KOG0371|consen 251 HQLVMEGYNWYHLWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFLQFDPSPRKVEP 308 (319)
T ss_pred HHHHhcccceeeecceeEEccCCchhhccccHHHHhhhhhccCcceEEecCCcccccc
Confidence 9999999999999999999999999999999999999999999999999998866544
No 17
>KOG0377|consensus
Probab=100.00 E-value=1.8e-58 Score=438.05 Aligned_cols=286 Identities=31% Similarity=0.618 Sum_probs=259.1
Q ss_pred ChhhHHHHHHHHHcCCCCCccccCCHHHHHHHHHHHHHHHHhCCCceeec----CCeeEEecCCCCHHHHHHhHHcCCCC
Q psy5889 8 NQESLDNVIKKLSRGVRPGRMINLDQADIVIMIRAARDIFMAQPMFLYLT----TPLKICGDIHGQYNDLLGLFSYGKPP 83 (326)
Q Consensus 8 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~i~----~~i~viGDIHG~~~~L~~il~~~g~~ 83 (326)
...+++.+|+.+... + .+++..++.|+.+|+++|++-|++-+++ ..|+||||+||.++||.-+|.+.|+|
T Consensus 117 ~~~~i~~lieaFk~k-q-----~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlP 190 (631)
T KOG0377|consen 117 RKNHIDLLIEAFKKK-Q-----RLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLP 190 (631)
T ss_pred CchHHHHHHHHHHHh-h-----hccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCC
Confidence 456788999988886 3 7999999999999999999999998875 47999999999999999999999999
Q ss_pred CCce-EEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhhhhhCchHHHHHHh---hHHHHHHHHhhhcc
Q psy5889 84 PTST-YLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANINKIYGFYEECKRRY---DIKLWKKFTDCFNC 159 (326)
Q Consensus 84 ~~~~-~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~---~~~~~~~~~~~f~~ 159 (326)
+.++ |||.||+||||.+|+|||..|+++-+.||..+++-|||||+.++|-.|||..|...+| +..+.+.+.++|++
T Consensus 191 S~~npYvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leevy~W 270 (631)
T KOG0377|consen 191 SSSNPYVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEVYRW 270 (631)
T ss_pred CCCCCeeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHHHHh
Confidence 7755 9999999999999999999999999999999999999999999999999999999999 67899999999999
Q ss_pred CceEEEEcCeEEEecCCCCCCCCCccccccCCCC--------CC-CC-------------CCCcccceecCCCCCccCCc
Q psy5889 160 MPVAAVVDHKIFCCHGGLSPQLTSFSQITNLPRP--------TE-VP-------------EEGLLVDLLWSDPEENISGW 217 (326)
Q Consensus 160 LP~~~~i~~~il~vHgGi~p~~~~l~~i~~i~rp--------~~-~~-------------~~~~~~dllWsdP~~~~~~~ 217 (326)
||++.+++.++|+||||+|.. ++++-+.+|.|- .. .. +...+.|++||||.....+|
T Consensus 271 LPi~tiid~~ilvvHGGiSd~-Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~ 349 (631)
T KOG0377|consen 271 LPIGTIIDSRILVVHGGISDS-TDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCV 349 (631)
T ss_pred cchhhhcccceEEEecCcccc-hhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCC
Confidence 999999999999999999864 577777776652 11 00 11347899999999777777
Q ss_pred ccCCCCCccccChHHHHHHHHhcCCceEEEeccccccCeEEEcCceEEEEEccCCCCCCCCCeEEEEEEcCCCceEEEEE
Q psy5889 218 GHNDRGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMIVDENLTCSFHIM 297 (326)
Q Consensus 218 ~~~~rg~g~~Fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa~~y~~~~~N~gavl~i~~~~~~~~~~~ 297 (326)
.+.-||.|++||++++..||++++++++||+|||.++||++++|++|+|||||+||.....|+||++++....+..|+++
T Consensus 350 pNt~RGgG~yFGpDvT~~~Lqk~~l~~liRSHECKpeGyEf~Hd~kvlTiFSASNYYe~GSNrGAYikl~~~~~PhfvQY 429 (631)
T KOG0377|consen 350 PNTLRGGGCYFGPDVTDNFLQKHRLSYLIRSHECKPEGYEFCHDNKVLTIFSASNYYEIGSNRGAYIKLGNQLTPHFVQY 429 (631)
T ss_pred cccccCCcceeCchHHHHHHHHhCceeeeeecccCCCcceeeeCCeEEEEEeccchheecCCCceEEEeCCCCCchHHHH
Confidence 77789999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ecC
Q psy5889 298 KPK 300 (326)
Q Consensus 298 ~~~ 300 (326)
...
T Consensus 430 ~a~ 432 (631)
T KOG0377|consen 430 QAA 432 (631)
T ss_pred Hhh
Confidence 743
No 18
>KOG0376|consensus
Probab=100.00 E-value=5.9e-51 Score=394.01 Aligned_cols=274 Identities=39% Similarity=0.759 Sum_probs=257.2
Q ss_pred cCCHHHHHHHHHHHHHHHHhCCCceeec----CCeeEEecCCCCHHHHHHhHHcCCCCCC-ceEEEeccccCCCCCcHHH
Q psy5889 30 NLDQADIVIMIRAARDIFMAQPMFLYLT----TPLKICGDIHGQYNDLLGLFSYGKPPPT-STYLFLGDYVDRGKHSIET 104 (326)
Q Consensus 30 ~~~~~~~~~l~~~~~~il~~ep~~l~i~----~~i~viGDIHG~~~~L~~il~~~g~~~~-~~~vfLGD~VDRG~~s~ev 104 (326)
.++...+-.|+..+..+++++|++++++ ..+.|+||.||++.++.++|+..|.|+. ..|+|.||+||||..|.|+
T Consensus 182 ~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfngdfv~rgs~s~e~ 261 (476)
T KOG0376|consen 182 KLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSWSVEV 261 (476)
T ss_pred ccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccccccCceeeecccceee
Confidence 5777788899999999999999999875 3589999999999999999999999876 4599999999999999999
Q ss_pred HHHHHHhhhcCCCcEEEECCCchhhhhhhhhCchHHHHHHhhHHHHHHHHhhhccCceEEEEcCeEEEecCCCCC-CCCC
Q psy5889 105 ICLLFAYKIRYPDNIYLLRGNHESANINKIYGFYEECKRRYDIKLWKKFTDCFNCMPVAAVVDHKIFCCHGGLSP-QLTS 183 (326)
Q Consensus 105 l~lL~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP~~~~i~~~il~vHgGi~p-~~~~ 183 (326)
...+++.|+.+|+++|++|||||...++..|||..++..+|..+.+..+.+.|..||++..|+++++.+|||+.. .-.+
T Consensus 262 ~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte~~~~~f~~~f~~LPl~~~i~~~~~~~hgglf~~~~v~ 341 (476)
T KOG0376|consen 262 ILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTEEMFNLFSEVFIWLPLAHLINNKVLVMHGGLFSPDGVT 341 (476)
T ss_pred eeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHHHHHHhhhhhhccccchhhhcCceEEEecCcCCCCCcc
Confidence 999999999999999999999999999999999999999999999988889999999999999999999999853 3458
Q ss_pred ccccccCCCCCCCCCCCcccceecCCCCCccCCcccCCCCCccccChHHHHHHHHhcCCceEEEeccccccCeEEEcCce
Q psy5889 184 FSQITNLPRPTEVPEEGLLVDLLWSDPEENISGWGHNDRGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKK 263 (326)
Q Consensus 184 l~~i~~i~rp~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~g~~Fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~ 263 (326)
++++++|.|+..+++.+..++++||||. ...|..++.||.|..||++++++||+.|+++.|||||+..+.||++-++|+
T Consensus 342 l~d~r~i~r~~~~~~~~~~~~~lws~pq-~~~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~rshe~~d~gy~~eh~g~ 420 (476)
T KOG0376|consen 342 LEDFRNIDRFEQPPEEGLMCELLWSDPQ-PANGRSPSKRGVGLQFGPDVTERFLQDNNLDKIIRSHEVKDEGYEVEHSGK 420 (476)
T ss_pred HHHHHhhhhccCCcccccccccccCCCc-cccCCCccccCceeeeCCCchhhHHhhcchHHHhhccccCCCceeeecCCc
Confidence 9999999999888999999999999998 457899999999999999999999999999999999999999999999999
Q ss_pred EEEEEccCCCCCCCCCeEEEEEEc-CCCceEEEEEecCCccc
Q psy5889 264 LVTLFSAPNYCGEFDNAGAMMIVD-ENLTCSFHIMKPKKKIL 304 (326)
Q Consensus 264 ~iTvfSa~~y~~~~~N~gavl~i~-~~~~~~~~~~~~~~~~~ 304 (326)
|+|||||||||+..+|.||++.++ ++.+..+.+|+++|...
T Consensus 421 l~tvfsapnycd~~~n~ga~i~~~~~~~~p~~~~~e~vp~~~ 462 (476)
T KOG0376|consen 421 LITVFSAPNYCDQMGNKGAFIHLEPDDLTPNFYTFEAVPHPD 462 (476)
T ss_pred EEEEecCcchhhhcCCcceEEEecCCCCccceeecccCCCCC
Confidence 999999999999999999999999 67899999999998553
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=5.4e-37 Score=277.27 Aligned_cols=214 Identities=50% Similarity=0.822 Sum_probs=178.2
Q ss_pred eEEecCCCCHHHHHHhHHcCCCCCCceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhhhhhCchHH
Q psy5889 61 KICGDIHGQYNDLLGLFSYGKPPPTSTYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANINKIYGFYEE 140 (326)
Q Consensus 61 ~viGDIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e 140 (326)
+|||||||++++|.++++..+..+.+++||||||||||+.+.+|+.++..++.. |.++++|+||||.+.++...++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 589999999999999999999988899999999999999999999999999877 8899999999999988776655433
Q ss_pred H---------HHHhhHHHHHHHHhhhccCceEEEEcC-eEEEecCCCCCCCCCccccccCCCCCCCCCCCcccceecCCC
Q psy5889 141 C---------KRRYDIKLWKKFTDCFNCMPVAAVVDH-KIFCCHGGLSPQLTSFSQITNLPRPTEVPEEGLLVDLLWSDP 210 (326)
Q Consensus 141 ~---------~~~~~~~~~~~~~~~f~~LP~~~~i~~-~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdP 210 (326)
. .......++..+.+++..||+++.++. +++|||||++|.....++.. ..+..+...+++|+||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~ 153 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDP 153 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCC
Confidence 2 222356788889999999999999976 89999999999875444433 2334566789999999
Q ss_pred CCccCCcccCCCCCccccChHHHHHHHHhcCCceEEEeccccccCeEEEcCceEEEEEccCCCCCCCCCeEEEEE
Q psy5889 211 EENISGWGHNDRGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMI 285 (326)
Q Consensus 211 ~~~~~~~~~~~rg~g~~Fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa~~y~~~~~N~gavl~ 285 (326)
.........+.++. |+++++.|++.++.+.|||||+++..|+.....++++||+|++.|++..+|..+++.
T Consensus 154 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~~~~~~~~l~~~~ 224 (225)
T cd00144 154 LELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNKLAALV 224 (225)
T ss_pred CCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEecCCcccCCCCccEEEEe
Confidence 85433333444444 899999999999999999999999999876778899999999999877777777653
No 20
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.95 E-value=4.6e-27 Score=216.66 Aligned_cols=122 Identities=25% Similarity=0.418 Sum_probs=98.5
Q ss_pred CCeeEEecCCCCHHHHHHhHHcCCCC---------CCceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchh
Q psy5889 58 TPLKICGDIHGQYNDLLGLFSYGKPP---------PTSTYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHES 128 (326)
Q Consensus 58 ~~i~viGDIHG~~~~L~~il~~~g~~---------~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~ 128 (326)
++++||||||||++.|.++|+++++. +.+++|||||||||||+|.+|+++++.+. .+.++++||||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHH
Confidence 47899999999999999999998874 46789999999999999999999998874 45689999999999
Q ss_pred hhhhhhhCc-------hHHHHHHh-------hHHHHHHHHhhhccCceEEEEc-CeEEEecCCCCCCC
Q psy5889 129 ANINKIYGF-------YEECKRRY-------DIKLWKKFTDCFNCMPVAAVVD-HKIFCCHGGLSPQL 181 (326)
Q Consensus 129 ~~~~~~~gf-------~~e~~~~~-------~~~~~~~~~~~f~~LP~~~~i~-~~il~vHgGi~p~~ 181 (326)
++++...+- ..+....| ...+.+.+.++++++|++..++ ++++|||||+.|..
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~ 146 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDY 146 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHh
Confidence 987653221 11222233 1346778899999999998774 57999999998864
No 21
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.95 E-value=9.2e-27 Score=209.74 Aligned_cols=176 Identities=22% Similarity=0.364 Sum_probs=130.3
Q ss_pred eEEecCCCCHHHHHHhHHcCCC--------CCCceEEEeccccCCCCCcHHHHHHHHHhhhc---CCCcEEEECCCchhh
Q psy5889 61 KICGDIHGQYNDLLGLFSYGKP--------PPTSTYLFLGDYVDRGKHSIETICLLFAYKIR---YPDNIYLLRGNHESA 129 (326)
Q Consensus 61 ~viGDIHG~~~~L~~il~~~g~--------~~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~---~p~~v~llrGNHE~~ 129 (326)
+||||||||+++|.++|+.+++ .+.+.+||+||+||||+++.+|+++|+.++.. .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 5899999999999999998875 35688999999999999999999999998754 457899999999999
Q ss_pred hhhhhhCchHH-HHHHh------hHHHH---HHHHhhhccCceEEEEcCeEEEecCCCCCCCCCccccccCCCCCCCCCC
Q psy5889 130 NINKIYGFYEE-CKRRY------DIKLW---KKFTDCFNCMPVAAVVDHKIFCCHGGLSPQLTSFSQITNLPRPTEVPEE 199 (326)
Q Consensus 130 ~~~~~~gf~~e-~~~~~------~~~~~---~~~~~~f~~LP~~~~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~ 199 (326)
.+...+.+... ..... ....+ ..+.+|++.+|+...++ ++++||||++|
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~-------------------- 139 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGP-------------------- 139 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHH--------------------
Confidence 98754433211 11111 01111 34588999999999986 58889999843
Q ss_pred CcccceecCCCCCccCCcccCCCCCccccChHHHHHHHHhcCCceEEEeccccccCeEEEcCceEEEEEccC
Q psy5889 200 GLLVDLLWSDPEENISGWGHNDRGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKKLVTLFSAP 271 (326)
Q Consensus 200 ~~~~dllWsdP~~~~~~~~~~~rg~g~~Fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa~ 271 (326)
+|++.-...... .+ =+...+.++++.++.++||+|||+++.|....+++++++|.++.
T Consensus 140 ------~w~r~y~~~~~~---~~-----~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g~ 197 (208)
T cd07425 140 ------LWYRGYSKETSD---KE-----CAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDVGM 197 (208)
T ss_pred ------HHhhHhhhhhhh---cc-----chHHHHHHHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeCCc
Confidence 233221000000 00 01256888999999999999999999887668899999998843
No 22
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.93 E-value=1e-24 Score=199.70 Aligned_cols=121 Identities=26% Similarity=0.456 Sum_probs=98.3
Q ss_pred CCeeEEecCCCCHHHHHHhHHcCCCCC----------CceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCch
Q psy5889 58 TPLKICGDIHGQYNDLLGLFSYGKPPP----------TSTYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHE 127 (326)
Q Consensus 58 ~~i~viGDIHG~~~~L~~il~~~g~~~----------~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE 127 (326)
+|+.||||||||+++|.++|+.+++.+ .+++|||||||||||+|.||+++|.+++.. .++++||||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~~--~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVAA--GAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhhC--CcEEEEECCcH
Confidence 589999999999999999999997753 468999999999999999999999988643 57999999999
Q ss_pred hhhhhhhhC--------chHHHHHHh---hHHHHHHHHhhhccCceEEEEc-CeEEEecCCCCCCC
Q psy5889 128 SANINKIYG--------FYEECKRRY---DIKLWKKFTDCFNCMPVAAVVD-HKIFCCHGGLSPQL 181 (326)
Q Consensus 128 ~~~~~~~~g--------f~~e~~~~~---~~~~~~~~~~~f~~LP~~~~i~-~~il~vHgGi~p~~ 181 (326)
.++++...+ +. +....+ ..++.+.+.+||+.||+...++ ++++|||||++|..
T Consensus 79 ~~l~~~~~~~~~~~~~~~~-~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~~ 143 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLE-ETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEEM 143 (234)
T ss_pred HHHHHHhcCCCccccCccc-chHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChHh
Confidence 998764322 22 222333 3457788899999999998875 47999999988753
No 23
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.93 E-value=7e-25 Score=199.39 Aligned_cols=115 Identities=22% Similarity=0.300 Sum_probs=92.0
Q ss_pred eEEecCCCCHHHHHHhHHcCCCC--------CCceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhh
Q psy5889 61 KICGDIHGQYNDLLGLFSYGKPP--------PTSTYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANIN 132 (326)
Q Consensus 61 ~viGDIHG~~~~L~~il~~~g~~--------~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~ 132 (326)
+||||||||++.|.++++++++. +.+++|||||||||||+|.+|+++|..+.. +.++++|+||||.+++.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~--~~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVD--AGHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhc--CCCEEEEEccCcHHHHH
Confidence 69999999999999999998765 467899999999999999999999998753 35899999999999875
Q ss_pred hhhCc------h-----------HHHHHHh--hHHHHHHHHhhhccCceEEEEcCeEEEecCCCC
Q psy5889 133 KIYGF------Y-----------EECKRRY--DIKLWKKFTDCFNCMPVAAVVDHKIFCCHGGLS 178 (326)
Q Consensus 133 ~~~gf------~-----------~e~~~~~--~~~~~~~~~~~f~~LP~~~~i~~~il~vHgGi~ 178 (326)
...+- . .+..+.+ ..+.++.+.+||++||+.... ++++|||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEE-CCEEEEECCcC
Confidence 32210 0 0122222 234567889999999999987 56999999985
No 24
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.92 E-value=1.1e-24 Score=203.63 Aligned_cols=217 Identities=17% Similarity=0.272 Sum_probs=142.4
Q ss_pred CCeeEEecCCCCHHHHHHhHHcCCCC-CCceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhhhhhC
Q psy5889 58 TPLKICGDIHGQYNDLLGLFSYGKPP-PTSTYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANINKIYG 136 (326)
Q Consensus 58 ~~i~viGDIHG~~~~L~~il~~~g~~-~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~~~~g 136 (326)
|+++||||||||++.|.++++++++. ..+.++||||+|||||+|.+|++++..+ +.++++|+||||.+.+...+|
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~~~~g 76 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLAVAAG 76 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHHhhcC
Confidence 57899999999999999999999874 5688999999999999999999999876 357999999999998876666
Q ss_pred chHH----HHHHh-hHHHHHHHHhhhccCceEEEE-cCeEEEecCCCCCCCCCccccc----cCCCCCCCCC-CCcccce
Q psy5889 137 FYEE----CKRRY-DIKLWKKFTDCFNCMPVAAVV-DHKIFCCHGGLSPQLTSFSQIT----NLPRPTEVPE-EGLLVDL 205 (326)
Q Consensus 137 f~~e----~~~~~-~~~~~~~~~~~f~~LP~~~~i-~~~il~vHgGi~p~~~~l~~i~----~i~rp~~~~~-~~~~~dl 205 (326)
.... ....+ .....+.+.+|++++|+...+ ++++++||||++|.+. +++.. ++...+..+. ......+
T Consensus 77 ~~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~-~~~~~~~a~eve~~l~~~~~~~~~~~m 155 (275)
T PRK00166 77 IKRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWD-LATALALAREVEAVLRSDDYRDFLANM 155 (275)
T ss_pred CccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCC-HHHHHHHHHHHHHHhcCCcHHHHHHHh
Confidence 4321 11122 234456788999999999886 5679999999999874 22211 1111111111 1234455
Q ss_pred ecCCCCCccCCcccCCCCCc-cccChHHHHH--HHHhcC-----------------------------CceEEEeccccc
Q psy5889 206 LWSDPEENISGWGHNDRGVS-YTFGADMVHE--FLKKFN-----------------------------IDLVCRAHQVVE 253 (326)
Q Consensus 206 lWsdP~~~~~~~~~~~rg~g-~~Fg~~~~~~--fl~~~~-----------------------------l~~iIRgH~~~~ 253 (326)
.|+.|. .|.++-.|.. ..|...++.+ ||...| -..||-||...-
T Consensus 156 y~~~p~----~W~~~l~~~~r~r~~~n~~trmR~~~~~g~l~~~~k~~~~~~~~~~~pWf~~~~~~~~~~~i~fGHwa~l 231 (275)
T PRK00166 156 YGNEPD----RWSPDLTGLERLRYIINAFTRMRFCTPDGRLDFKCKGPPDEAPAGLKPWFEVPGRKTRDYTIVFGHWAAL 231 (275)
T ss_pred cCCCcC----ccCcccCchHHHHHHHHHHhhhhcccCCCceeecccCCcccCCcCCCCCccCcCccCCCCeEEEecCccc
Confidence 555553 2444433321 1222222211 222222 347999999987
Q ss_pred cCeEEEcCceEEEEEccCCCCCCCCCeEEEEEEcCC
Q psy5889 254 EGYEFFADKKLVTLFSAPNYCGEFDNAGAMMIVDEN 289 (326)
Q Consensus 254 ~G~~~~~~~~~iTvfSa~~y~~~~~N~gavl~i~~~ 289 (326)
.|... ...++.+=+.--+ +++=+.+.++..
T Consensus 232 ~G~~~--~~~~~~LDtGcvw----gg~Lta~~l~~~ 261 (275)
T PRK00166 232 EGLTT--PPNIIALDTGCVW----GGKLTALRLEDK 261 (275)
T ss_pred CCccC--CCCeEEeeccccc----CCeEEEEEeCCC
Confidence 78765 4557777665433 344456677643
No 25
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.92 E-value=4.4e-25 Score=204.42 Aligned_cols=119 Identities=23% Similarity=0.336 Sum_probs=99.1
Q ss_pred eeEEecCCCCHHHHHHhHHcCCCC-CCceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhhhhhCch
Q psy5889 60 LKICGDIHGQYNDLLGLFSYGKPP-PTSTYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANINKIYGFY 138 (326)
Q Consensus 60 i~viGDIHG~~~~L~~il~~~g~~-~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~~~~gf~ 138 (326)
++||||||||+++|.++++++++. +.++++|+||||||||+|.||+++|..++ .++++|+||||.+.+...+|+.
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 489999999999999999999876 57889999999999999999999999876 5799999999999887666643
Q ss_pred HH----HHHH-hhHHHHHHHHhhhccCceEEEEcC-eEEEecCCCCCCCC
Q psy5889 139 EE----CKRR-YDIKLWKKFTDCFNCMPVAAVVDH-KIFCCHGGLSPQLT 182 (326)
Q Consensus 139 ~e----~~~~-~~~~~~~~~~~~f~~LP~~~~i~~-~il~vHgGi~p~~~ 182 (326)
.. .... +.....+.+.+|++++|+...+++ ++++||||++|.++
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w~ 126 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQWS 126 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCCC
Confidence 21 1111 133345678999999999999865 79999999999873
No 26
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.91 E-value=6.7e-24 Score=192.33 Aligned_cols=115 Identities=22% Similarity=0.295 Sum_probs=90.1
Q ss_pred CCeeEEecCCCCHHHHHHhHHcCCCC-CCceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhhhhhC
Q psy5889 58 TPLKICGDIHGQYNDLLGLFSYGKPP-PTSTYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANINKIYG 136 (326)
Q Consensus 58 ~~i~viGDIHG~~~~L~~il~~~g~~-~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~~~~g 136 (326)
++++||||||||+++|.++|+.+++. ..++++||||+|||||+|.+|+++|.. .++++|+||||.++++...+
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~------~~~~~v~GNHE~~~l~~~~~ 90 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEE------HWVRAVRGNHEQMALDALAS 90 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHc------CCceEeeCchHHHHHHHHHC
Confidence 48999999999999999999999876 568899999999999999999999864 25789999999998864322
Q ss_pred chH--------HHHHHh---hHHHHHHHHhhhccCceEEEEc---CeEEEecCCCC
Q psy5889 137 FYE--------ECKRRY---DIKLWKKFTDCFNCMPVAAVVD---HKIFCCHGGLS 178 (326)
Q Consensus 137 f~~--------e~~~~~---~~~~~~~~~~~f~~LP~~~~i~---~~il~vHgGi~ 178 (326)
-.. +....+ ..+.+..+.+|+++||+...+. +++++||||++
T Consensus 91 ~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p 146 (218)
T PRK11439 91 QQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYP 146 (218)
T ss_pred CccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCC
Confidence 100 001111 1234566779999999998763 56999999984
No 27
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.91 E-value=3.3e-24 Score=199.42 Aligned_cols=121 Identities=22% Similarity=0.362 Sum_probs=101.3
Q ss_pred CCeeEEecCCCCHHHHHHhHHcCCCC-CCceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhhhhhC
Q psy5889 58 TPLKICGDIHGQYNDLLGLFSYGKPP-PTSTYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANINKIYG 136 (326)
Q Consensus 58 ~~i~viGDIHG~~~~L~~il~~~g~~-~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~~~~g 136 (326)
|+++||||||||+++|.++|+++++. ..++++|+||+|||||+|+||+.++.++. +++++|+||||.+.+...+|
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~g 76 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFAG 76 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhcC
Confidence 46899999999999999999999876 46889999999999999999999998864 46889999999999987777
Q ss_pred ch-----HHHHHHhhHHHHHHHHhhhccCceEEEEc-CeEEEecCCCCCCCC
Q psy5889 137 FY-----EECKRRYDIKLWKKFTDCFNCMPVAAVVD-HKIFCCHGGLSPQLT 182 (326)
Q Consensus 137 f~-----~e~~~~~~~~~~~~~~~~f~~LP~~~~i~-~~il~vHgGi~p~~~ 182 (326)
+. +.....+.....+.+.+|++++|+....+ .++++||||++|.++
T Consensus 77 ~~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~ 128 (279)
T TIGR00668 77 ISRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWD 128 (279)
T ss_pred CCccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCc
Confidence 52 22222234566788999999999998764 369999999999884
No 28
>PHA02239 putative protein phosphatase
Probab=99.91 E-value=1.4e-23 Score=192.29 Aligned_cols=171 Identities=23% Similarity=0.310 Sum_probs=118.8
Q ss_pred CCeeEEecCCCCHHHHHHhHHcCCCC--CCceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhhhhh
Q psy5889 58 TPLKICGDIHGQYNDLLGLFSYGKPP--PTSTYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANINKIY 135 (326)
Q Consensus 58 ~~i~viGDIHG~~~~L~~il~~~g~~--~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~~~~ 135 (326)
|++++|||||||++.|.++++.+... +.+.+||+|||||||++|.+|+..|+.+.. .+.++++|+||||.+++....
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~l~~~~ 79 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEFYNIME 79 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHHHHHHh
Confidence 47899999999999999999987533 468899999999999999999999988753 456899999999998764321
Q ss_pred C----------ch----HHHHHHhh-------------------------------HHHHHHHHhhhccCceEEEEcCeE
Q psy5889 136 G----------FY----EECKRRYD-------------------------------IKLWKKFTDCFNCMPVAAVVDHKI 170 (326)
Q Consensus 136 g----------f~----~e~~~~~~-------------------------------~~~~~~~~~~f~~LP~~~~i~~~i 170 (326)
. +. .+....|+ ...+..+..|++.||+.... +++
T Consensus 80 ~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~-~~~ 158 (235)
T PHA02239 80 NVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKE-DKY 158 (235)
T ss_pred CchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEE-CCE
Confidence 0 00 11112221 11335566799999999997 569
Q ss_pred EEecCCCCCCCCCccccccCCCCCCCCCCCcccceecCCCCCccCCcccCCCCCccccChHHHHHHHHhcCCceEEEecc
Q psy5889 171 FCCHGGLSPQLTSFSQITNLPRPTEVPEEGLLVDLLWSDPEENISGWGHNDRGVSYTFGADMVHEFLKKFNIDLVCRAHQ 250 (326)
Q Consensus 171 l~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~g~~Fg~~~~~~fl~~~~l~~iIRgH~ 250 (326)
+|||||+.|... +++ +...+++|.+. . .+.. .-+.||.|||
T Consensus 159 ifVHAGi~p~~~-~~~-------------q~~~~llWiR~-f-----~~~~-------------------~g~~vV~GHT 199 (235)
T PHA02239 159 IFSHSGGVSWKP-VEE-------------QTIDQLIWSRD-F-----QPRK-------------------DGFTYVCGHT 199 (235)
T ss_pred EEEeCCCCCCCC-hhh-------------CCHhHeEEecc-c-----CCCC-------------------CCcEEEECCC
Confidence 999999988642 222 23568999985 1 1111 1135899999
Q ss_pred ccccCeEEEcCceEEEEEcc
Q psy5889 251 VVEEGYEFFADKKLVTLFSA 270 (326)
Q Consensus 251 ~~~~G~~~~~~~~~iTvfSa 270 (326)
++..+..... ++.|.|-..
T Consensus 200 p~~~~~~~~~-~~~I~IDtG 218 (235)
T PHA02239 200 PTDSGEVEIN-GDMLMCDVG 218 (235)
T ss_pred CCCCCccccc-CCEEEeecC
Confidence 9976543322 334555443
No 29
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.90 E-value=4e-23 Score=192.72 Aligned_cols=187 Identities=20% Similarity=0.247 Sum_probs=125.9
Q ss_pred CeeEEecCCCCHHHHHHhHHcCCCC------CCceEEEeccccCCCCCcHHHHHHHHHhhhcCCC-cEEEECCCchhhhh
Q psy5889 59 PLKICGDIHGQYNDLLGLFSYGKPP------PTSTYLFLGDYVDRGKHSIETICLLFAYKIRYPD-NIYLLRGNHESANI 131 (326)
Q Consensus 59 ~i~viGDIHG~~~~L~~il~~~g~~------~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~-~v~llrGNHE~~~~ 131 (326)
++++||||||+++.|.++++.+... ..+.+|||||||||||+|.+|+++|.+++..+|. ++++|+||||.+++
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l 82 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFA 82 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHH
Confidence 6899999999999999998865321 2457999999999999999999999999888876 68999999998876
Q ss_pred hhhhC---------ch------------------------------------------------------HHHHHHhh--
Q psy5889 132 NKIYG---------FY------------------------------------------------------EECKRRYD-- 146 (326)
Q Consensus 132 ~~~~g---------f~------------------------------------------------------~e~~~~~~-- 146 (326)
..... |. .+....|+
T Consensus 83 ~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv~ 162 (304)
T cd07421 83 AFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGVP 162 (304)
T ss_pred hHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCCC
Confidence 43211 00 01122221
Q ss_pred -------HHHHHHHHhhhccCceEEEEcCeE-------------EEecCCCCCCCCCccccccCC-CCCCCCCCCcccce
Q psy5889 147 -------IKLWKKFTDCFNCMPVAAVVDHKI-------------FCCHGGLSPQLTSFSQITNLP-RPTEVPEEGLLVDL 205 (326)
Q Consensus 147 -------~~~~~~~~~~f~~LP~~~~i~~~i-------------l~vHgGi~p~~~~l~~i~~i~-rp~~~~~~~~~~dl 205 (326)
..+.+...+|++.||.....++ + +|||||+.|...--+|.+.+. +....| -.++
T Consensus 163 ~~~~~l~~avP~~H~~fl~~l~~~~~~~~-~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p----~~~~ 237 (304)
T cd07421 163 HGSSDLIKAVPEEHKKFLRNLVWVHEEDD-VCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIP----KIAP 237 (304)
T ss_pred cchHHHHHhCCHHHHHHHHhCCceEEeCc-ccccccccccccceEEEEcccCCCCChHHhhhhhhccccccc----cccc
Confidence 2345678899999999988643 5 999999999986444444322 222222 2378
Q ss_pred ecCCCCCccCCcccCCCCCccccChHHHHHHHHhcCCceEEEeccccccCeEEEcCceEEEEEccCCCC
Q psy5889 206 LWSDPEENISGWGHNDRGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKKLVTLFSAPNYC 274 (326)
Q Consensus 206 lWsdP~~~~~~~~~~~rg~g~~Fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa~~y~ 274 (326)
+|.+.. |-..++.. . ..-.+||.||+. +....+.-|.|=+...|.
T Consensus 238 l~~R~~-----f~~~~~~~---~-----------~~~~~VVhGHt~-----~~~~~~~Ri~iDtGa~~~ 282 (304)
T cd07421 238 LSGRKN-----VWNIPQEL---A-----------DKKTIVVSGHHG-----KLHIDGLRLIIDEGGGFD 282 (304)
T ss_pred cccchh-----hhcCcccc---c-----------CCCeEEEECCCC-----CceecCCEEEEECCCCcC
Confidence 888875 21222211 0 012569999992 233344445566665554
No 30
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.90 E-value=7.4e-23 Score=183.91 Aligned_cols=169 Identities=21% Similarity=0.235 Sum_probs=117.1
Q ss_pred CCeeEEecCCCCHHHHHHhHHcCCCC-CCceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhhhhhC
Q psy5889 58 TPLKICGDIHGQYNDLLGLFSYGKPP-PTSTYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANINKIYG 136 (326)
Q Consensus 58 ~~i~viGDIHG~~~~L~~il~~~g~~-~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~~~~g 136 (326)
++++|||||||++.+|.++++.++.. ..+.++|+||+||||+++.|++++|.. .++++++||||.+.+....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhC
Confidence 47899999999999999999998765 468899999999999999999998864 36899999999998876543
Q ss_pred c--hHHHHHHh---------hHHHHHHHHhhhccCceEEEEc---CeEEEecCCCCCCCCCccccccCCCCCCCCCCCcc
Q psy5889 137 F--YEECKRRY---------DIKLWKKFTDCFNCMPVAAVVD---HKIFCCHGGLSPQLTSFSQITNLPRPTEVPEEGLL 202 (326)
Q Consensus 137 f--~~e~~~~~---------~~~~~~~~~~~f~~LP~~~~i~---~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~ 202 (326)
- ..+..... ..++++.+.+||+.||+...++ .++++||||+++... ...+. + +...+...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~-~~~~~---~--~~~~~~~~ 148 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDDW-SDGVG---A--VTLRPEDI 148 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcchh-hhhhh---c--cccCcccc
Confidence 1 11111111 2235667888999999999874 479999999865431 11100 0 11223446
Q ss_pred cceecCCCCCccCCcccCCCCCccccChHHHHHHHHhcCCceEEEeccccccCeE
Q psy5889 203 VDLLWSDPEENISGWGHNDRGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYE 257 (326)
Q Consensus 203 ~dllWsdP~~~~~~~~~~~rg~g~~Fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~ 257 (326)
.+++|+++... ... +...-+.+.||.||++.+.-+.
T Consensus 149 ~~~~w~~~~~~-----~~~--------------~~~~~~~~~iV~GHTh~~~~~~ 184 (207)
T cd07424 149 EELLWSRTRIQ-----KAQ--------------TQPIKGVDAVVHGHTPVKRPLR 184 (207)
T ss_pred eeeeeccchhh-----hcC--------------ccccCCCCEEEECCCCCCcceE
Confidence 67899877511 100 0001145679999999875443
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.87 E-value=8e-22 Score=178.84 Aligned_cols=115 Identities=21% Similarity=0.250 Sum_probs=86.9
Q ss_pred CCeeEEecCCCCHHHHHHhHHcCCCC-CCceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhhhhhC
Q psy5889 58 TPLKICGDIHGQYNDLLGLFSYGKPP-PTSTYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANINKIYG 136 (326)
Q Consensus 58 ~~i~viGDIHG~~~~L~~il~~~g~~-~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~~~~g 136 (326)
.|++||||||||+++|.++++.+.+. ..++++||||||||||+|.+|+++|.+ .+++.||||||.+++.....
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~~ 88 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFET 88 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHhc
Confidence 48999999999999999999998754 467899999999999999999998853 36889999999988864311
Q ss_pred chH--------HHHHHhh---HHHHHHHHhhhccCceEEEEc---CeEEEecCCCC
Q psy5889 137 FYE--------ECKRRYD---IKLWKKFTDCFNCMPVAAVVD---HKIFCCHGGLS 178 (326)
Q Consensus 137 f~~--------e~~~~~~---~~~~~~~~~~f~~LP~~~~i~---~~il~vHgGi~ 178 (326)
-.. +-...+. .........|+++||+...+. +++++||||++
T Consensus 89 ~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 89 GDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred CChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 000 0001111 123344567899999998763 46899999983
No 32
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.47 E-value=3.8e-13 Score=111.61 Aligned_cols=159 Identities=26% Similarity=0.327 Sum_probs=102.0
Q ss_pred CCeeEEecCCCCHHHH----HHhHHcCCCCCCceEEEeccccCCCCCcHHHHHHH--HHhhhcCCCcEEEECCCchhhhh
Q psy5889 58 TPLKICGDIHGQYNDL----LGLFSYGKPPPTSTYLFLGDYVDRGKHSIETICLL--FAYKIRYPDNIYLLRGNHESANI 131 (326)
Q Consensus 58 ~~i~viGDIHG~~~~L----~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~lL--~~lk~~~p~~v~llrGNHE~~~~ 131 (326)
+||++|||+|+..... ..+.......+.+.+|++||++|++..+.+..... .......+..+++++||||....
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 4789999999999987 34444444456688999999999999887777654 44455567789999999999876
Q ss_pred hhhhCchHHHHH----------------------------------HhhHHHHHHHHhhhccCceEEEEcCeEEEecCCC
Q psy5889 132 NKIYGFYEECKR----------------------------------RYDIKLWKKFTDCFNCMPVAAVVDHKIFCCHGGL 177 (326)
Q Consensus 132 ~~~~gf~~e~~~----------------------------------~~~~~~~~~~~~~f~~LP~~~~i~~~il~vHgGi 177 (326)
...+........ ............+.............++++|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~ 160 (200)
T PF00149_consen 81 NSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPP 160 (200)
T ss_dssp HHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSS
T ss_pred ccccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEEecCC
Confidence 532221111110 0011111222222222333344456799999988
Q ss_pred CCCCCCccccccCCCCCCCCCCCcccceecCCCCCccCCcccCCCCCccccChHHHHHHHHhcCCceEEEecccc
Q psy5889 178 SPQLTSFSQITNLPRPTEVPEEGLLVDLLWSDPEENISGWGHNDRGVSYTFGADMVHEFLKKFNIDLVCRAHQVV 252 (326)
Q Consensus 178 ~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~g~~Fg~~~~~~fl~~~~l~~iIRgH~~~ 252 (326)
.+........ .....+.+.+..++++.++++++.||+..
T Consensus 161 ~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 161 YSSSSDSSSY------------------------------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp STTSSSTHHH------------------------------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred CCcccccccc------------------------------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 6643211110 12346678899999999999999999864
No 33
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.32 E-value=6.6e-11 Score=100.87 Aligned_cols=82 Identities=23% Similarity=0.340 Sum_probs=62.4
Q ss_pred CeeEEecCCCCHHHHHHhHHcCCCCCCceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhhhhhCch
Q psy5889 59 PLKICGDIHGQYNDLLGLFSYGKPPPTSTYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANINKIYGFY 138 (326)
Q Consensus 59 ~i~viGDIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~~~~gf~ 138 (326)
++.++||+||+...+.++++.+.. .+.++++||++++++.+. + .....+++++||||....
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~--~~~~~~~~V~GNhD~~~~------- 61 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------L--ELKAPVIAVRGNCDGEVD------- 61 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------h--hcCCcEEEEeCCCCCcCC-------
Confidence 578999999999999999988654 678999999999998765 1 123468999999997532
Q ss_pred HHHHHHhhHHHHHHHHhhhccCceEEEE--c-CeEEEecCCC
Q psy5889 139 EECKRRYDIKLWKKFTDCFNCMPVAAVV--D-HKIFCCHGGL 177 (326)
Q Consensus 139 ~e~~~~~~~~~~~~~~~~f~~LP~~~~i--~-~~il~vHgGi 177 (326)
+..+|....+ + .+++++||..
T Consensus 62 ------------------~~~~p~~~~~~~~g~~i~v~Hg~~ 85 (155)
T cd00841 62 ------------------FPILPEEAVLEIGGKRIFLTHGHL 85 (155)
T ss_pred ------------------cccCCceEEEEECCEEEEEECCcc
Confidence 3455654443 3 3799999964
No 34
>PRK09453 phosphodiesterase; Provisional
Probab=99.29 E-value=1e-10 Score=102.91 Aligned_cols=69 Identities=26% Similarity=0.313 Sum_probs=55.7
Q ss_pred CCeeEEecCCCCHHHHHHhHHcCCCCCCceEEEeccccCCCCC--------cHHHHHHHHHhhhcCCCcEEEECCCchhh
Q psy5889 58 TPLKICGDIHGQYNDLLGLFSYGKPPPTSTYLFLGDYVDRGKH--------SIETICLLFAYKIRYPDNIYLLRGNHESA 129 (326)
Q Consensus 58 ~~i~viGDIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~--------s~evl~lL~~lk~~~p~~v~llrGNHE~~ 129 (326)
|++.++||+||++.++.++++.+...+.+.++++||++|+|++ +.+++.+|..+ ...+++++||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~----~~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY----ADKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc----CCceEEEccCCcch
Confidence 5799999999999999999887755566889999999999874 45677666543 24699999999975
Q ss_pred h
Q psy5889 130 N 130 (326)
Q Consensus 130 ~ 130 (326)
.
T Consensus 77 ~ 77 (182)
T PRK09453 77 V 77 (182)
T ss_pred h
Confidence 3
No 35
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.28 E-value=8.2e-11 Score=99.48 Aligned_cols=152 Identities=20% Similarity=0.323 Sum_probs=91.8
Q ss_pred CCeeEEecCCCCHHHHHHhHHcCCCCCCceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhhhhhCc
Q psy5889 58 TPLKICGDIHGQYNDLLGLFSYGKPPPTSTYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANINKIYGF 137 (326)
Q Consensus 58 ~~i~viGDIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~~~~gf 137 (326)
|+++++||+|++.+.+.++++.+ ...+.++++||++| ..++++.+..+ +++.++||||..........
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~----~~~~~~~~~~~------~~~~v~GNHD~~~~~~~~~~ 68 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFD----PEEVLELLRDI------PVYVVRGNHDNWAFPNENDE 68 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCS----HHHHHHHHHHH------EEEEE--CCHSTHHHSEECT
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchh----HHHHHHHHhcC------CEEEEeCCcccccchhhhhc
Confidence 58999999999999999999987 34677899999999 37777777544 69999999997553322110
Q ss_pred hHHHHHHhhHHHHHHHHhhhccCceEEEEcCeEEEecCCCCCCCCCccccccCCCCCCCCCCCcccceecCCCCCccCCc
Q psy5889 138 YEECKRRYDIKLWKKFTDCFNCMPVAAVVDHKIFCCHGGLSPQLTSFSQITNLPRPTEVPEEGLLVDLLWSDPEENISGW 217 (326)
Q Consensus 138 ~~e~~~~~~~~~~~~~~~~f~~LP~~~~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdP~~~~~~~ 217 (326)
. . +....... .-+.+++++||....
T Consensus 69 ~----------~------~~~~~~~~-~~~~~i~~~H~~~~~-------------------------------------- 93 (156)
T PF12850_consen 69 E----------Y------LLDALRLT-IDGFKILLSHGHPYD-------------------------------------- 93 (156)
T ss_dssp C----------S------SHSEEEEE-ETTEEEEEESSTSSS--------------------------------------
T ss_pred c----------c------cccceeee-ecCCeEEEECCCCcc--------------------------------------
Confidence 0 0 11222211 114579999996533
Q ss_pred ccCCCCCccccChHHHHHHHHhcCCceEEEeccccccCeEEEcCceEEEEEccCCCCCCCCCeEEEEEEc
Q psy5889 218 GHNDRGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMIVD 287 (326)
Q Consensus 218 ~~~~rg~g~~Fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa~~y~~~~~N~gavl~i~ 287 (326)
...+.+.+.+.+...+.++++.||...+.-.+ ..+..+++.=|..... .+...+++.++
T Consensus 94 --------~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~-~~~~~~~~~Gs~~~~~--~~~~~~~~i~~ 152 (156)
T PF12850_consen 94 --------VQWDPAELREILSRENVDLVLHGHTHRPQVFK-IGGIHVINPGSIGGPR--HGDQSGYAILD 152 (156)
T ss_dssp --------STTTHHHHHHHHHHTTSSEEEESSSSSEEEEE-ETTEEEEEE-GSSS-S--SSSSEEEEEEE
T ss_pred --------cccChhhhhhhhcccCCCEEEcCCcccceEEE-ECCEEEEECCcCCCCC--CCCCCEEEEEE
Confidence 01344557778889999999999998754333 3344444443332221 12245555543
No 36
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.20 E-value=4.8e-10 Score=96.22 Aligned_cols=63 Identities=14% Similarity=0.129 Sum_probs=49.0
Q ss_pred CCeeEEecCCCCHHHHHHhHHcCCCC-CCceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhh
Q psy5889 58 TPLKICGDIHGQYNDLLGLFSYGKPP-PTSTYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESA 129 (326)
Q Consensus 58 ~~i~viGDIHG~~~~L~~il~~~g~~-~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~ 129 (326)
+++.++||+||++.++..+++..... ..+.++++||++ +.+++.++..+. ..++.++||||..
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~~ 64 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDGE 64 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCch
Confidence 57999999999998777666655444 568899999999 467777775542 3589999999983
No 37
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.13 E-value=5.4e-10 Score=93.42 Aligned_cols=118 Identities=19% Similarity=0.225 Sum_probs=80.2
Q ss_pred CeeEEecCCCCHHHHHHhHHcCCCCCCceEEEeccccCCCCCcH--HHHHHHHHhhhcCCCcEEEECCCchhhhhhhhhC
Q psy5889 59 PLKICGDIHGQYNDLLGLFSYGKPPPTSTYLFLGDYVDRGKHSI--ETICLLFAYKIRYPDNIYLLRGNHESANINKIYG 136 (326)
Q Consensus 59 ~i~viGDIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~--evl~lL~~lk~~~p~~v~llrGNHE~~~~~~~~g 136 (326)
++.++||+||++. . ....+.+.++++||+++++..+. +.+.++..++ .| .+++++||||....
T Consensus 1 ~i~~isD~H~~~~----~---~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~~-~~~~v~GNHD~~~~----- 65 (135)
T cd07379 1 RFVCISDTHSRHR----T---ISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP--HP-HKIVIAGNHDLTLD----- 65 (135)
T ss_pred CEEEEeCCCCCCC----c---CcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--CC-eEEEEECCCCCcCC-----
Confidence 4789999999987 1 22345678999999999986432 3444444332 22 36789999996411
Q ss_pred chHHHHHHhhHHHHHHHHhhhccCceEEEEcCeEEEecCCCCCCCCCccccccCCCCCCCCCCCcccceecCCCCCccCC
Q psy5889 137 FYEECKRRYDIKLWKKFTDCFNCMPVAAVVDHKIFCCHGGLSPQLTSFSQITNLPRPTEVPEEGLLVDLLWSDPEENISG 216 (326)
Q Consensus 137 f~~e~~~~~~~~~~~~~~~~f~~LP~~~~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdP~~~~~~ 216 (326)
.-+.+++++||.+.+.. + ..+ +
T Consensus 66 ----------------------------~~~~~ilv~H~~p~~~~----~------------------~~~--~------ 87 (135)
T cd07379 66 ----------------------------PEDTDILVTHGPPYGHL----D------------------LVS--S------ 87 (135)
T ss_pred ----------------------------CCCCEEEEECCCCCcCc----c------------------ccc--c------
Confidence 11457999999532210 0 000 0
Q ss_pred cccCCCCCccccChHHHHHHHHhcCCceEEEeccccccCeE
Q psy5889 217 WGHNDRGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYE 257 (326)
Q Consensus 217 ~~~~~rg~g~~Fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~ 257 (326)
....|.+.+.+++++.+.++++.||+..+.|++
T Consensus 88 --------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 88 --------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred --------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 123677889999999999999999999998887
No 38
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.12 E-value=3.7e-09 Score=96.39 Aligned_cols=71 Identities=8% Similarity=0.165 Sum_probs=57.8
Q ss_pred CCeeEEecCCCCHHHHHHhHHcCCCCCCceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhh
Q psy5889 58 TPLKICGDIHGQYNDLLGLFSYGKPPPTSTYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESA 129 (326)
Q Consensus 58 ~~i~viGDIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~ 129 (326)
+++.+++|+||++..|.++++.+.....+.+|++||++++|+..-++..++..+. ..+..+++++||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~-~l~~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILG-EAHLPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHH-hcCCceEEEcCCCChH
Confidence 5799999999999999999987654556889999999999976767766666554 2334799999999985
No 39
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=99.05 E-value=1.7e-10 Score=95.55 Aligned_cols=143 Identities=38% Similarity=0.655 Sum_probs=117.1
Q ss_pred hhhhhCchHHHHHHhhHH-HHHH---HHhhhccCceEEEEcC-eEEEecCCCCCCC-CCccccccCCCCC--CCCCCCcc
Q psy5889 131 INKIYGFYEECKRRYDIK-LWKK---FTDCFNCMPVAAVVDH-KIFCCHGGLSPQL-TSFSQITNLPRPT--EVPEEGLL 202 (326)
Q Consensus 131 ~~~~~gf~~e~~~~~~~~-~~~~---~~~~f~~LP~~~~i~~-~il~vHgGi~p~~-~~l~~i~~i~rp~--~~~~~~~~ 202 (326)
+...+++.+++...+... .|.. ..++|+.+|+.+.+++ .++|.|++++|.+ ..++.++.+.|.. .....+..
T Consensus 3 l~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~ 82 (155)
T COG0639 3 LTALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHT 82 (155)
T ss_pred hhhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCcccc
Confidence 344567777766666443 5666 9999999999999988 8999999999976 5677777777665 56666777
Q ss_pred cceecCCCCCc-cCCcccCCCCCccccChHHHHHHHHhcCCceEEEeccccccCeEEEcCceEEEEEccCCCC
Q psy5889 203 VDLLWSDPEEN-ISGWGHNDRGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKKLVTLFSAPNYC 274 (326)
Q Consensus 203 ~dllWsdP~~~-~~~~~~~~rg~g~~Fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa~~y~ 274 (326)
.+.+|+++... ...|.++++|.+..| .+....|+..+..+.+.++|+.+..++.....+..+|.|++++|+
T Consensus 83 ~~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~~lt~~~~~~~~ 154 (155)
T COG0639 83 HDLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAPNYC 154 (155)
T ss_pred ccccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEeCCCeeeEEeccccc
Confidence 78899999863 678999999998877 788889998888888999999999999888776899999999987
No 40
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.98 E-value=2.5e-08 Score=87.80 Aligned_cols=110 Identities=20% Similarity=0.269 Sum_probs=75.0
Q ss_pred CeeEEecCC-CCHH-----HHHHhHHcCCCCCCceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhh
Q psy5889 59 PLKICGDIH-GQYN-----DLLGLFSYGKPPPTSTYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANIN 132 (326)
Q Consensus 59 ~i~viGDIH-G~~~-----~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~ 132 (326)
+|.||||.| |.-. .+.++++. ...+.++.+||+++ .+++.+|..++ .+++.++||||...
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D~~~-- 66 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---GKIQHVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFDENL-- 66 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---CCCCEEEECCCCCC-----HHHHHHHHhhC----CceEEEECCCCccc--
Confidence 478999999 5533 35666654 34578999999986 77777775542 25899999999731
Q ss_pred hhhCchHHHHHHhhHHHHHHHHhhhccCceEEEE---cCeEEEecCCCCCCCCCccccccCCCCCCCCCCCcccceecCC
Q psy5889 133 KIYGFYEECKRRYDIKLWKKFTDCFNCMPVAAVV---DHKIFCCHGGLSPQLTSFSQITNLPRPTEVPEEGLLVDLLWSD 209 (326)
Q Consensus 133 ~~~gf~~e~~~~~~~~~~~~~~~~f~~LP~~~~i---~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsd 209 (326)
.+|....+ +.+++++||..-+
T Consensus 67 --------------------------~lp~~~~~~~~g~~i~l~HG~~~~------------------------------ 90 (178)
T cd07394 67 --------------------------NYPETKVITVGQFKIGLIHGHQVV------------------------------ 90 (178)
T ss_pred --------------------------cCCCcEEEEECCEEEEEEECCcCC------------------------------
Confidence 34544433 2389999984200
Q ss_pred CCCccCCcccCCCCCccccChHHHHHHHHhcCCceEEEecccccc
Q psy5889 210 PEENISGWGHNDRGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEE 254 (326)
Q Consensus 210 P~~~~~~~~~~~rg~g~~Fg~~~~~~fl~~~~l~~iIRgH~~~~~ 254 (326)
+. ...+.+.++.+..+.+.+|.||+..+.
T Consensus 91 ~~----------------~~~~~~~~~~~~~~~dvii~GHTH~p~ 119 (178)
T cd07394 91 PW----------------GDPDSLAALQRQLDVDILISGHTHKFE 119 (178)
T ss_pred CC----------------CCHHHHHHHHHhcCCCEEEECCCCcce
Confidence 00 023355666778899999999999863
No 41
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.97 E-value=4.9e-09 Score=96.16 Aligned_cols=156 Identities=21% Similarity=0.227 Sum_probs=96.1
Q ss_pred CeeEEecCCCCHHHHH-HhHHcCCCCCCceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhhhh---
Q psy5889 59 PLKICGDIHGQYNDLL-GLFSYGKPPPTSTYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANINKI--- 134 (326)
Q Consensus 59 ~i~viGDIHG~~~~L~-~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~~~--- 134 (326)
+|+++|||||++.... +.++.. ..+.++++||+++ .+.+++..|..+ +..+++++||||.+.....
T Consensus 2 rIa~isDiHg~~~~~~~~~l~~~---~pD~Vl~~GDi~~---~~~~~~~~l~~l----~~p~~~V~GNHD~~~~~~~~~k 71 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALHLL---QPDLVLFVGDFGN---ESVQLVRAISSL----PLPKAVILGNHDAWYDATFRKK 71 (238)
T ss_pred EEEEEecCCCCchHHHHHHHhcc---CCCEEEECCCCCc---ChHHHHHHHHhC----CCCeEEEcCCCcccccccccch
Confidence 6899999999987642 344433 3478999999986 456777766554 3458999999998653200
Q ss_pred h----------C--------------------------------chHHHHHHh-hHHHHHHHHhhhccCceEEEEcCeEE
Q psy5889 135 Y----------G--------------------------------FYEECKRRY-DIKLWKKFTDCFNCMPVAAVVDHKIF 171 (326)
Q Consensus 135 ~----------g--------------------------------f~~e~~~~~-~~~~~~~~~~~f~~LP~~~~i~~~il 171 (326)
+ | ...++...| -...++.+...++.++.+......+|
T Consensus 72 ~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vl 151 (238)
T cd07397 72 GDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLIL 151 (238)
T ss_pred HHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEE
Confidence 0 0 001344444 23455666777777764433344799
Q ss_pred EecCCCCCCCCCccccccCCCCCCCCCCCcccceecCCCCCccCCcccCCCCCccccChHHHHHHHHhcC----CceEEE
Q psy5889 172 CCHGGLSPQLTSFSQITNLPRPTEVPEEGLLVDLLWSDPEENISGWGHNDRGVSYTFGADMVHEFLKKFN----IDLVCR 247 (326)
Q Consensus 172 ~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~g~~Fg~~~~~~fl~~~~----l~~iIR 247 (326)
+.|++++... ++... |. ...|.+. |..+|...+.+.+++.. .++++-
T Consensus 152 iaH~~~~G~g---~~~~~--------------------~c--g~d~~~~----~~~~G~~~l~~ai~~~~~~~~~~l~~f 202 (238)
T cd07397 152 LAHNGPSGLG---SDAED--------------------PC--GRDWKPP----GGDWGDPDLALAISQIQQGRQVPLVVF 202 (238)
T ss_pred EeCcCCcCCC---ccccc--------------------cc--ccccCCc----CCCCCCHHHHHHHHHHhccCCCCEEEe
Confidence 9999986533 11110 11 1123321 12367777777777655 799999
Q ss_pred eccccc
Q psy5889 248 AHQVVE 253 (326)
Q Consensus 248 gH~~~~ 253 (326)
||-...
T Consensus 203 GH~H~~ 208 (238)
T cd07397 203 GHMHHR 208 (238)
T ss_pred CCccCc
Confidence 998765
No 42
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.91 E-value=1.7e-08 Score=87.80 Aligned_cols=65 Identities=23% Similarity=0.310 Sum_probs=46.8
Q ss_pred eeEEecCCCCHHHHHHhHHcCCCCCCceEEEeccccCCCCCc-HHHHHHHHHhhhcCCCcEEEECCCchhhh
Q psy5889 60 LKICGDIHGQYNDLLGLFSYGKPPPTSTYLFLGDYVDRGKHS-IETICLLFAYKIRYPDNIYLLRGNHESAN 130 (326)
Q Consensus 60 i~viGDIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s-~evl~lL~~lk~~~p~~v~llrGNHE~~~ 130 (326)
|+++||+||++..+.. ......+.+.+|+.||++++|... .+.+..|.. .+..++.++||||...
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~~----~~~p~~~v~GNHD~~~ 66 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLLA----IGVPVLAVPGNCDTPE 66 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHHh----cCCCEEEEcCCCCCHH
Confidence 5789999999998876 223334557899999999999763 333333322 3456999999999754
No 43
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.90 E-value=1.5e-08 Score=81.53 Aligned_cols=118 Identities=28% Similarity=0.409 Sum_probs=84.7
Q ss_pred eEEecCCCCHHHHHHhH--HcCCCCCCceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhhhhhCch
Q psy5889 61 KICGDIHGQYNDLLGLF--SYGKPPPTSTYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANINKIYGFY 138 (326)
Q Consensus 61 ~viGDIHG~~~~L~~il--~~~g~~~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~~~~gf~ 138 (326)
+++||+|+......... ........+.+|++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----------
Confidence 47999999999887764 33334555789999999999988777665433333345678999999999
Q ss_pred HHHHHHhhHHHHHHHHhhhccCceEEEEcCeEEEecCCCCCCCCCccccccCCCCCCCCCCCcccceecCCCCCccCCcc
Q psy5889 139 EECKRRYDIKLWKKFTDCFNCMPVAAVVDHKIFCCHGGLSPQLTSFSQITNLPRPTEVPEEGLLVDLLWSDPEENISGWG 218 (326)
Q Consensus 139 ~e~~~~~~~~~~~~~~~~f~~LP~~~~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdP~~~~~~~~ 218 (326)
++++|..+.+........
T Consensus 70 -------------------------------i~~~H~~~~~~~~~~~~~------------------------------- 87 (131)
T cd00838 70 -------------------------------ILLTHGPPYDPLDELSPD------------------------------- 87 (131)
T ss_pred -------------------------------EEEeccCCCCCchhhccc-------------------------------
Confidence 899999775433100000
Q ss_pred cCCCCCccccChHHHHHHHHhcCCceEEEeccccccCeEE
Q psy5889 219 HNDRGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEF 258 (326)
Q Consensus 219 ~~~rg~g~~Fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~ 258 (326)
.......+...+...+.+.+|.||+.....+..
T Consensus 88 -------~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~~ 120 (131)
T cd00838 88 -------EDPGSEALLELLEKYGVDLVLSGHTHVYERREP 120 (131)
T ss_pred -------chhhHHHHHHHHHHhCCCEEEeCCeeccccccC
Confidence 000566788889999999999999998766553
No 44
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.81 E-value=2.2e-08 Score=91.97 Aligned_cols=212 Identities=14% Similarity=0.144 Sum_probs=108.3
Q ss_pred CCeeEEecCCCC------HHHHHHhHHcCCCCCCceEEEeccccCC-------CCCcHHHHHHHHHhhhcCCCcEEEECC
Q psy5889 58 TPLKICGDIHGQ------YNDLLGLFSYGKPPPTSTYLFLGDYVDR-------GKHSIETICLLFAYKIRYPDNIYLLRG 124 (326)
Q Consensus 58 ~~i~viGDIHG~------~~~L~~il~~~g~~~~~~~vfLGD~VDR-------G~~s~evl~lL~~lk~~~p~~v~llrG 124 (326)
|++++|+|+|.. ...+.+.++.. ....+.++++||++|. .+...+++.+|..++. .+..+++++|
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~-~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~-~g~~v~~v~G 78 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGE-ARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSD-SGVPCYFMHG 78 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhh-hccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHH-cCCeEEEEeC
Confidence 578999999954 23455555432 2345789999999985 2334567777776653 2347999999
Q ss_pred CchhhhhhhhhCchHHHHHHhhHHHHHHHHhhhccCceEEEEc-CeEEEecCCCCCCCC-CccccccCCCCCCCCCCCcc
Q psy5889 125 NHESANINKIYGFYEECKRRYDIKLWKKFTDCFNCMPVAAVVD-HKIFCCHGGLSPQLT-SFSQITNLPRPTEVPEEGLL 202 (326)
Q Consensus 125 NHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP~~~~i~-~~il~vHgGi~p~~~-~l~~i~~i~rp~~~~~~~~~ 202 (326)
|||...... ..+..+ ...+.. |....++ .+++++||-..+.-. ....++++-|-.. ..
T Consensus 79 NHD~~~~~~-------~~~~~g-------~~~l~~-~~~~~~~g~~i~l~HGd~~~~~d~~y~~~r~~~r~~~-----~~ 138 (241)
T PRK05340 79 NRDFLLGKR-------FAKAAG-------MTLLPD-PSVIDLYGQRVLLLHGDTLCTDDKAYQRFRRKVRNPW-----LQ 138 (241)
T ss_pred CCchhhhHH-------HHHhCC-------CEEeCC-cEEEEECCEEEEEECCcccccCCHHHHHHHHHHhCHH-----HH
Confidence 999743210 000101 012222 3333344 469999998654221 1111222222100 00
Q ss_pred cceecCCCCCc----cCCccc-----CCCCCc--cccChHHHHHHHHhcCCceEEEeccccccCeEEEcCceEEEEEccC
Q psy5889 203 VDLLWSDPEEN----ISGWGH-----NDRGVS--YTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKKLVTLFSAP 271 (326)
Q Consensus 203 ~dllWsdP~~~----~~~~~~-----~~rg~g--~~Fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa~ 271 (326)
.-+. .-|... ...+.. +.+... ....++++.+.+++.+.+.+|.||+..+.=.....++.-++-.+-+
T Consensus 139 ~~~~-~~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~~~~~~~lg 217 (241)
T PRK05340 139 WLFL-ALPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIHQLQAGGQPATRIVLG 217 (241)
T ss_pred HHHH-hCCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcceeeccCCCcceEEEEeC
Confidence 0000 011100 000100 000111 2234577889999999999999999876433332232112222223
Q ss_pred CCCCCCCCeEEEEEEcCCCceEEEEE
Q psy5889 272 NYCGEFDNAGAMMIVDENLTCSFHIM 297 (326)
Q Consensus 272 ~y~~~~~N~gavl~i~~~~~~~~~~~ 297 (326)
+. ...+.++.++++. ++++.+
T Consensus 218 dw----~~~~~~~~~~~~~-~~~~~~ 238 (241)
T PRK05340 218 DW----HEQGSVLKVDADG-VELIPF 238 (241)
T ss_pred CC----CCCCeEEEEECCc-eEEEeC
Confidence 22 2347788888764 455443
No 45
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.77 E-value=3e-08 Score=85.52 Aligned_cols=67 Identities=21% Similarity=0.296 Sum_probs=47.7
Q ss_pred eeEEecCCCCHHHHHHhH-HcCCCCCCceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhh
Q psy5889 60 LKICGDIHGQYNDLLGLF-SYGKPPPTSTYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESA 129 (326)
Q Consensus 60 i~viGDIHG~~~~L~~il-~~~g~~~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~ 129 (326)
+.++||+|+....+...+ +.......+.++++||+++++.....+. ++.. ...+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~~--~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLLA--LKGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHHh--hcCCccEEEeCCCcceE
Confidence 468999999987776654 2233345577899999999987665543 2222 23456799999999986
No 46
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.69 E-value=2.1e-07 Score=77.59 Aligned_cols=107 Identities=18% Similarity=0.183 Sum_probs=75.0
Q ss_pred eEEecCCCCHHHHHHhHHcCCCCCCceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhhhhhCchHH
Q psy5889 61 KICGDIHGQYNDLLGLFSYGKPPPTSTYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANINKIYGFYEE 140 (326)
Q Consensus 61 ~viGDIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e 140 (326)
.||||.||..+.+.++... ..+.+.++++||+. .+++..+..++ ...++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~~---~~~~~~V~GN~D------------- 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTML---NVPVYYVHGNHD------------- 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHHc---CCCEEEEeCCCc-------------
Confidence 4899999998877776664 45568899999973 34555555541 235889999999
Q ss_pred HHHHhhHHHHHHHHhhhccCceEEEEcCeEEEecCCCCCCCCCccccccCCCCCCCCCCCcccceecCCCCCccCCcccC
Q psy5889 141 CKRRYDIKLWKKFTDCFNCMPVAAVVDHKIFCCHGGLSPQLTSFSQITNLPRPTEVPEEGLLVDLLWSDPEENISGWGHN 220 (326)
Q Consensus 141 ~~~~~~~~~~~~~~~~f~~LP~~~~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdP~~~~~~~~~~ 220 (326)
-+++++|+-+.+.. +.+.
T Consensus 57 ---------------------------~~Ilv~H~pp~~~~-------------------------~~~~---------- 74 (129)
T cd07403 57 ---------------------------VDILLTHAPPAGIG-------------------------DGED---------- 74 (129)
T ss_pred ---------------------------cCEEEECCCCCcCc-------------------------Cccc----------
Confidence 36899998321100 0000
Q ss_pred CCCCccccChHHHHHHHHhcCCceEEEeccccccCeE
Q psy5889 221 DRGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYE 257 (326)
Q Consensus 221 ~rg~g~~Fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~ 257 (326)
...-|.+++.+++++.+.++++.||...+..+.
T Consensus 75 ----~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 75 ----FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred ----ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 011356788899999999999999999887766
No 47
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.61 E-value=1.9e-06 Score=77.89 Aligned_cols=193 Identities=16% Similarity=0.126 Sum_probs=101.1
Q ss_pred CeeEEecCCC----CHHHH----HHhHHcCCCCCCceEEEeccccCCCCCcH--HHH-HHHHHhhhcCCCcEEEECCCch
Q psy5889 59 PLKICGDIHG----QYNDL----LGLFSYGKPPPTSTYLFLGDYVDRGKHSI--ETI-CLLFAYKIRYPDNIYLLRGNHE 127 (326)
Q Consensus 59 ~i~viGDIHG----~~~~L----~~il~~~g~~~~~~~vfLGD~VDRG~~s~--evl-~lL~~lk~~~p~~v~llrGNHE 127 (326)
+++++||+|- ....+ ..+.+.......+.+|++||++|.+.... +.+ ..+..|. ..+-.++.++||||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~-~~~~p~~~~~GNHD 80 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLD-KAGIPYSVLAGNHD 80 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHH-HcCCcEEEECCCCc
Confidence 5789999995 22222 33344433334577899999999998433 222 2222222 12345889999999
Q ss_pred hhhhhhhhCchHHHHHHhhHHHHHHHHhhhccCceEEEEcCeEEEecCCCCCCCCCccccccCCCCCCCCCCCcccceec
Q psy5889 128 SANINKIYGFYEECKRRYDIKLWKKFTDCFNCMPVAAVVDHKIFCCHGGLSPQLTSFSQITNLPRPTEVPEEGLLVDLLW 207 (326)
Q Consensus 128 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP~~~~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllW 207 (326)
.... -.+.. ..+.++.+.+.++..|- ...++++|-=+.+.-.. .....|
T Consensus 81 ~~~~-ld~~~--------~~~ql~WL~~~L~~~~~----~~~iv~~H~p~~~~~~~------------------~~~~~~ 129 (214)
T cd07399 81 LVLA-LEFGP--------RDEVLQWANEVLKKHPD----RPAILTTHAYLNCDDSR------------------PDSIDY 129 (214)
T ss_pred chhh-CCCCC--------CHHHHHHHHHHHHHCCC----CCEEEEecccccCCCCc------------------Cccccc
Confidence 4321 11111 23333445555554331 13478888743221100 000111
Q ss_pred CCCCCccCCcccCCCCCccccChHHHHHHHHhc-CCceEEEeccccccCeEEE-----cCceEEEEEccCCCCCCCCCeE
Q psy5889 208 SDPEENISGWGHNDRGVSYTFGADMVHEFLKKF-NIDLVCRAHQVVEEGYEFF-----ADKKLVTLFSAPNYCGEFDNAG 281 (326)
Q Consensus 208 sdP~~~~~~~~~~~rg~g~~Fg~~~~~~fl~~~-~l~~iIRgH~~~~~G~~~~-----~~~~~iTvfSa~~y~~~~~N~g 281 (326)
.. ...-+.+.+.+.++++ ++++++.||.... +.... .++.+..+.+........+|-.
T Consensus 130 ~~---------------~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~-~~~~~~~~~~~g~~v~~~~~~~q~~~~~g~~~ 193 (214)
T cd07399 130 DS---------------DVNDGQQIWDKLVKKNDNVFMVLSGHVHGA-GRTTLVSVGDAGRTVHQMLADYQGEPNGGNGF 193 (214)
T ss_pred cc---------------ccccHHHHHHHHHhCCCCEEEEEccccCCC-ceEEEcccCCCCCEeeEEeecccCCCCCCcce
Confidence 10 1123555688889888 8999999998753 33332 1344555544432211111111
Q ss_pred -EEEEEcCC-CceEEEEEec
Q psy5889 282 -AMMIVDEN-LTCSFHIMKP 299 (326)
Q Consensus 282 -avl~i~~~-~~~~~~~~~~ 299 (326)
.++.++++ .++.+.+|.|
T Consensus 194 ~r~~~f~~~~~~i~~~tysp 213 (214)
T cd07399 194 LRLLEFDPDNNKIDVRTYSP 213 (214)
T ss_pred EEEEEEecCCCEEEEEeCCC
Confidence 46777776 4777777665
No 48
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.59 E-value=4.1e-07 Score=83.36 Aligned_cols=68 Identities=21% Similarity=0.179 Sum_probs=48.7
Q ss_pred CeeEEecCCCCH------HHHHHhHHcCCCCCCceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhh
Q psy5889 59 PLKICGDIHGQY------NDLLGLFSYGKPPPTSTYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESA 129 (326)
Q Consensus 59 ~i~viGDIHG~~------~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~ 129 (326)
++.+++|+|.++ ..|.++++.+.....+.+|+.||++++.+.+.+++..+..+ .+..+++++||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 578999999653 22455655554445678999999999877666666655543 345799999999964
No 49
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.57 E-value=8.7e-07 Score=74.33 Aligned_cols=118 Identities=22% Similarity=0.193 Sum_probs=74.8
Q ss_pred eeEEecCCCCHH----------HHHHhHHcCCCCCCceEEEeccccCCCCCc-H-HHHHHHHHhhhcCCCcEEEECCCch
Q psy5889 60 LKICGDIHGQYN----------DLLGLFSYGKPPPTSTYLFLGDYVDRGKHS-I-ETICLLFAYKIRYPDNIYLLRGNHE 127 (326)
Q Consensus 60 i~viGDIHG~~~----------~L~~il~~~g~~~~~~~vfLGD~VDRG~~s-~-evl~lL~~lk~~~p~~v~llrGNHE 127 (326)
++.++|+|=... .|.++++.......+.++++||+++.|... . +...++..++... ..+++++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 467899993211 122234444344567899999999998742 1 2334444443221 37999999999
Q ss_pred hhhhhhhhCchHHHHHHhhHHHHHHHHhhhccCceEEEEcCeEEEecCCCCCCCCCccccccCCCCCCCCCCCcccceec
Q psy5889 128 SANINKIYGFYEECKRRYDIKLWKKFTDCFNCMPVAAVVDHKIFCCHGGLSPQLTSFSQITNLPRPTEVPEEGLLVDLLW 207 (326)
Q Consensus 128 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP~~~~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllW 207 (326)
. ++++|..+.+.-.
T Consensus 80 ~-----------------------------------------iv~~Hhp~~~~~~------------------------- 93 (144)
T cd07400 80 V-----------------------------------------IVVLHHPLVPPPG------------------------- 93 (144)
T ss_pred E-----------------------------------------EEEecCCCCCCCc-------------------------
Confidence 7 8889986533210
Q ss_pred CCCCCccCCcccCCCCCccccChHHHHHHHHhcCCceEEEeccccccCeEE
Q psy5889 208 SDPEENISGWGHNDRGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEF 258 (326)
Q Consensus 208 sdP~~~~~~~~~~~rg~g~~Fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~ 258 (326)
.+.... . +.+.+.+++++.++++++.||+..+..+..
T Consensus 94 --------~~~~~~-----~-~~~~~~~~l~~~~~~~~l~GH~H~~~~~~~ 130 (144)
T cd07400 94 --------SGRERL-----L-DAGDALKLLAEAGVDLVLHGHKHVPYVGNI 130 (144)
T ss_pred --------cccccC-----C-CHHHHHHHHHHcCCCEEEECCCCCcCeeec
Confidence 000000 1 566788999999999999999998765553
No 50
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.55 E-value=3.6e-06 Score=73.77 Aligned_cols=160 Identities=17% Similarity=0.200 Sum_probs=100.3
Q ss_pred CCeeEEecCCCCHHHHHHhHHcCCCCCCceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhhhhhCc
Q psy5889 58 TPLKICGDIHGQYNDLLGLFSYGKPPPTSTYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANINKIYGF 137 (326)
Q Consensus 58 ~~i~viGDIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~~~~gf 137 (326)
+++.|++|.||...+..+..+.......+.+|.+||++...... .+-. ....+++.++||.|.....
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~~-----~l~~---~~~~~i~~V~GN~D~~~~~----- 68 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTLD-----ALEG---GLAAKLIAVRGNCDGEVDQ----- 68 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccchH-----Hhhc---ccccceEEEEccCCCcccc-----
Confidence 67899999999997656565555555668899999999765421 1111 0236899999999985332
Q ss_pred hHHHHHHhhHHHHHHHHhhhccCceE--EEEc-CeEEEecCCCCCCCCCccccccCCCCCCCCCCCcccceecCCCCCcc
Q psy5889 138 YEECKRRYDIKLWKKFTDCFNCMPVA--AVVD-HKIFCCHGGLSPQLTSFSQITNLPRPTEVPEEGLLVDLLWSDPEENI 214 (326)
Q Consensus 138 ~~e~~~~~~~~~~~~~~~~f~~LP~~--~~i~-~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdP~~~~ 214 (326)
..+|-. ..++ -+++++||..-. .
T Consensus 69 --------------------~~~p~~~~~~~~g~ki~l~HGh~~~-~--------------------------------- 94 (172)
T COG0622 69 --------------------EELPEELVLEVGGVKIFLTHGHLYF-V--------------------------------- 94 (172)
T ss_pred --------------------ccCChhHeEEECCEEEEEECCCccc-c---------------------------------
Confidence 122222 2233 489999996422 1
Q ss_pred CCcccCCCCCccccChHHHHHHHHhcCCceEEEeccccccCeEEEcCceEEEEEccCCCCCCC--CCeEEEEEEcCC-Cc
Q psy5889 215 SGWGHNDRGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKKLVTLFSAPNYCGEF--DNAGAMMIVDEN-LT 291 (326)
Q Consensus 215 ~~~~~~~rg~g~~Fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa~~y~~~~--~N~gavl~i~~~-~~ 291 (326)
......++.+-+..+.+.+|.||+..+ .++...+ +++-+|.-+... .+..+++.++.+ .+
T Consensus 95 ------------~~~~~~l~~la~~~~~Dvli~GHTH~p-~~~~~~~----i~~vNPGS~s~pr~~~~~sy~il~~~~~~ 157 (172)
T COG0622 95 ------------KTDLSLLEYLAKELGADVLIFGHTHKP-VAEKVGG----ILLVNPGSVSGPRGGNPASYAILDVDNLE 157 (172)
T ss_pred ------------ccCHHHHHHHHHhcCCCEEEECCCCcc-cEEEECC----EEEEcCCCcCCCCCCCCcEEEEEEcCCCE
Confidence 023346677778888999999999986 3333222 444455444322 244456666554 66
Q ss_pred eEEEEEecCC
Q psy5889 292 CSFHIMKPKK 301 (326)
Q Consensus 292 ~~~~~~~~~~ 301 (326)
+....++...
T Consensus 158 ~~~~~~~~~~ 167 (172)
T COG0622 158 VEVLFLERDR 167 (172)
T ss_pred EEEEEeeccc
Confidence 6666665544
No 51
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.51 E-value=3.9e-07 Score=83.22 Aligned_cols=205 Identities=13% Similarity=0.131 Sum_probs=101.1
Q ss_pred eeEEecCCCCH------HHHHHhHHcCCCCCCceEEEeccccCCC-----CC--cHHHHHHHHHhhhcCCCcEEEECCCc
Q psy5889 60 LKICGDIHGQY------NDLLGLFSYGKPPPTSTYLFLGDYVDRG-----KH--SIETICLLFAYKIRYPDNIYLLRGNH 126 (326)
Q Consensus 60 i~viGDIHG~~------~~L~~il~~~g~~~~~~~vfLGD~VDRG-----~~--s~evl~lL~~lk~~~p~~v~llrGNH 126 (326)
+++++|+|... ..+.+.+..... ..+.++++||++|.. +. ..++..+|..|+. .+..+++++|||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~-~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~-~~~~v~~v~GNH 78 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEAR-KADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSD-QGVPCYFMHGNR 78 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhc-cCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHH-CCCeEEEEcCCC
Confidence 36899999542 244555544322 457899999999952 11 1345566666643 245799999999
Q ss_pred hhhhhhhhhCchHHHHHHhhHHHHHHH-HhhhccCceEEEE-cCeEEEecCCCCCCCC-CccccccCCC-CCC------C
Q psy5889 127 ESANINKIYGFYEECKRRYDIKLWKKF-TDCFNCMPVAAVV-DHKIFCCHGGLSPQLT-SFSQITNLPR-PTE------V 196 (326)
Q Consensus 127 E~~~~~~~~gf~~e~~~~~~~~~~~~~-~~~f~~LP~~~~i-~~~il~vHgGi~p~~~-~l~~i~~i~r-p~~------~ 196 (326)
|...-. . +.+.. ..++.. |....+ +.+++++||-.-..-. .....+++.| |.. .
T Consensus 79 D~~~~~-----------~----~~~~~gi~~l~~-~~~~~~~g~~ill~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~l 142 (231)
T TIGR01854 79 DFLIGK-----------R----FAREAGMTLLPD-PSVIDLYGQKVLLMHGDTLCTDDTAYQAFRAKVHQPWLQRLFLHL 142 (231)
T ss_pred chhhhH-----------H----HHHHCCCEEECC-CEEEEECCEEEEEEcCccccCCCHHHHHHHHHHhCHHHHHHHHhC
Confidence 974211 0 00100 112222 222233 4589999997543100 1111112111 100 0
Q ss_pred CC--CCcccceecCCCCCccCCcccCCCCCccccChHHHHHHHHhcCCceEEEeccccccCeEEEcCceEEEEEccCCCC
Q psy5889 197 PE--EGLLVDLLWSDPEENISGWGHNDRGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKKLVTLFSAPNYC 274 (326)
Q Consensus 197 ~~--~~~~~dllWsdP~~~~~~~~~~~rg~g~~Fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa~~y~ 274 (326)
|. ...+...+|+..... .. .....-....++.+.++++..+.+++|.||+..+.=..+..++.-.+-++-++..
T Consensus 143 ~~~~r~~l~~~~~~~s~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~GHtH~~~~~~~~~~~~~~~~~~lgdW~ 218 (231)
T TIGR01854 143 PLAVRVKLARKIRAESRAD-KQ---MKSQDIMDVNPAEVAAVMRRYGVDRLIHGHTHRPAIHPLQADGQPATRIVLGDWY 218 (231)
T ss_pred CHHHHHHHHHHHHHHHHHh-cC---CCcchhhCCCHHHHHHHHHHcCCCEEEECCccCcceeecccCCCccEEEEECCCc
Confidence 00 001111222211100 00 0000112235677889999999999999999876544433233223444444432
Q ss_pred CCCCCeEEEEEEcCCC
Q psy5889 275 GEFDNAGAMMIVDENL 290 (326)
Q Consensus 275 ~~~~N~gavl~i~~~~ 290 (326)
..+.++.+++++
T Consensus 219 ----~~~~~~~~~~~g 230 (231)
T TIGR01854 219 ----RQGSILRVDADG 230 (231)
T ss_pred ----cCCeEEEEcCCC
Confidence 236667776653
No 52
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=98.44 E-value=1.9e-05 Score=71.35 Aligned_cols=210 Identities=15% Similarity=0.217 Sum_probs=122.8
Q ss_pred cCCeeEEecCCCCHHHHHHhHHcCCCCCCceEEEecccc--CCCCCcHHHHHH--HHHhhhcCCCcEEEECCCchhhhhh
Q psy5889 57 TTPLKICGDIHGQYNDLLGLFSYGKPPPTSTYLFLGDYV--DRGKHSIETICL--LFAYKIRYPDNIYLLRGNHESANIN 132 (326)
Q Consensus 57 ~~~i~viGDIHG~~~~L~~il~~~g~~~~~~~vfLGD~V--DRG~~s~evl~l--L~~lk~~~p~~v~llrGNHE~~~~~ 132 (326)
.+++..+.|+||..+.+.++++.+.....+-+++.||+. ++|+.- .+... +..++ ...-.|+.++||.|...+.
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~-~~~~~~~~e~l~-~~~~~v~avpGNcD~~~v~ 80 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKE-VAEELNKLEALK-ELGIPVLAVPGNCDPPEVI 80 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchH-HHHhhhHHHHHH-hcCCeEEEEcCCCChHHHH
Confidence 468999999999999999999888777778899999999 888742 23332 33333 2335799999999886553
Q ss_pred hhhCchHHHHHHhhHHHHHHHHhhhccCceEEEEcCeEEEecCCCCCCC-CCc-----cccccCCCCC-CCCCCCcccce
Q psy5889 133 KIYGFYEECKRRYDIKLWKKFTDCFNCMPVAAVVDHKIFCCHGGLSPQL-TSF-----SQITNLPRPT-EVPEEGLLVDL 205 (326)
Q Consensus 133 ~~~gf~~e~~~~~~~~~~~~~~~~f~~LP~~~~i~~~il~vHgGi~p~~-~~l-----~~i~~i~rp~-~~~~~~~~~dl 205 (326)
... ...+.. -.+-...+++--+|-=||..|.- .+. ++|.+.-+.. ....+..---+
T Consensus 81 ~~l-------~~~~~~----------v~~~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~~~~Il~ 143 (226)
T COG2129 81 DVL-------KNAGVN----------VHGRVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADNPVNILL 143 (226)
T ss_pred HHH-------Hhcccc----------cccceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccCcceEEE
Confidence 210 000000 01122333443344445554422 111 1111111100 00000000011
Q ss_pred ecCCCCCccCCcccCCCCCccccChHHHHHHHHhcCCceEEEeccccccCeEEEcCceEEEEEccCCCCCCCCCeEEEEE
Q psy5889 206 LWSDPEENISGWGHNDRGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMI 285 (326)
Q Consensus 206 lWsdP~~~~~~~~~~~rg~g~~Fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa~~y~~~~~N~gavl~ 285 (326)
+-+-|-...-. .+-| -..-|.++++++.++.+-.+.|+||-....|.....+ ||+-.|.-.+ .-+.|++.
T Consensus 144 ~HaPP~gt~~d---~~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~iG~----TivVNPG~~~--~g~yA~i~ 213 (226)
T COG2129 144 THAPPYGTLLD---TPSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKIGN----TIVVNPGPLG--EGRYALIE 213 (226)
T ss_pred ecCCCCCcccc---CCCC-ccccchHHHHHHHHHhCCceEEEeeecccccccccCC----eEEECCCCcc--CceEEEEE
Confidence 12222111001 1222 1345899999999999999999999999999988765 8899988754 46788888
Q ss_pred EcCCCceEEEE
Q psy5889 286 VDENLTCSFHI 296 (326)
Q Consensus 286 i~~~~~~~~~~ 296 (326)
++++ .++..+
T Consensus 214 l~~~-~Vk~~~ 223 (226)
T COG2129 214 LEKE-VVKLEQ 223 (226)
T ss_pred ecCc-EEEEEE
Confidence 8876 444333
No 53
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=98.28 E-value=7.4e-05 Score=69.93 Aligned_cols=71 Identities=13% Similarity=0.063 Sum_probs=47.2
Q ss_pred cCCeeEEecCC-C-----------CHHHHHHhHHcCCC--CCCceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEE
Q psy5889 57 TTPLKICGDIH-G-----------QYNDLLGLFSYGKP--PPTSTYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLL 122 (326)
Q Consensus 57 ~~~i~viGDIH-G-----------~~~~L~~il~~~g~--~~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~ll 122 (326)
..+++.|+|+| . ..+.|.++++.+.. ++.+-+|+.||+++.|. .+-+..+...-...+..++.+
T Consensus 14 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~v 91 (275)
T PRK11148 14 RVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVWL 91 (275)
T ss_pred CEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEEe
Confidence 35799999999 1 24567777765532 23577899999999874 223333332222345679999
Q ss_pred CCCchhh
Q psy5889 123 RGNHESA 129 (326)
Q Consensus 123 rGNHE~~ 129 (326)
+||||..
T Consensus 92 ~GNHD~~ 98 (275)
T PRK11148 92 PGNHDFQ 98 (275)
T ss_pred CCCCCCh
Confidence 9999974
No 54
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.18 E-value=2.6e-06 Score=76.49 Aligned_cols=70 Identities=23% Similarity=0.211 Sum_probs=51.5
Q ss_pred CCeeEEecCCCCHH----HHHHhHHcCCCCCCceEEEeccccCCCCCcH-HHHHHHHHhhhcCCCcEEEECCCchhh
Q psy5889 58 TPLKICGDIHGQYN----DLLGLFSYGKPPPTSTYLFLGDYVDRGKHSI-ETICLLFAYKIRYPDNIYLLRGNHESA 129 (326)
Q Consensus 58 ~~i~viGDIHG~~~----~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~-evl~lL~~lk~~~p~~v~llrGNHE~~ 129 (326)
.++++++|+|+... .+.++++.+.....+.+++.||++|.+.... ++..++..++ .+..++++.||||..
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~--~~~~v~~v~GNHD~~ 76 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLK--APLGVYAVLGNHDYY 76 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccC--CCCCEEEECCCcccc
Confidence 57899999998643 5666666554445578899999999988764 5555555443 345699999999985
No 55
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.16 E-value=3.4e-06 Score=78.97 Aligned_cols=70 Identities=17% Similarity=0.130 Sum_probs=51.2
Q ss_pred CCeeEEecCCCC----HHHHHHhHHcCCCCCCceEEEeccccCCC--CCcHHHHHHHHHhhhcCCCcEEEECCCchhh
Q psy5889 58 TPLKICGDIHGQ----YNDLLGLFSYGKPPPTSTYLFLGDYVDRG--KHSIETICLLFAYKIRYPDNIYLLRGNHESA 129 (326)
Q Consensus 58 ~~i~viGDIHG~----~~~L~~il~~~g~~~~~~~vfLGD~VDRG--~~s~evl~lL~~lk~~~p~~v~llrGNHE~~ 129 (326)
.++++++|+|.. ...+.++++.+.....+-++++||++|++ ....++...|..++.. ..++.+.||||..
T Consensus 50 ~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~--~pv~~V~GNHD~~ 125 (271)
T PRK11340 50 FKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAEC--APTFACFGNHDRP 125 (271)
T ss_pred cEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhc--CCEEEecCCCCcc
Confidence 579999999976 55677777665555567899999999954 2334455666666543 3599999999974
No 56
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=98.16 E-value=4.7e-05 Score=69.12 Aligned_cols=67 Identities=30% Similarity=0.359 Sum_probs=45.1
Q ss_pred CeeEEecCCCC------------HHHHHHhHHcCCCC--CCceEEEeccccCCCCCc-HH-HHHHHHHhhhcCCCcEEEE
Q psy5889 59 PLKICGDIHGQ------------YNDLLGLFSYGKPP--PTSTYLFLGDYVDRGKHS-IE-TICLLFAYKIRYPDNIYLL 122 (326)
Q Consensus 59 ~i~viGDIHG~------------~~~L~~il~~~g~~--~~~~~vfLGD~VDRG~~s-~e-vl~lL~~lk~~~p~~v~ll 122 (326)
|+++++|+|=. ...|.++++.+... ..+-+|++||+++.|... .+ +...+.. .+-.++.+
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~----~~~p~~~v 76 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPESYERLRELLAA----LPIPVYLL 76 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHHHHHHHHHHHhh----cCCCEEEe
Confidence 57899999944 34566676654333 557799999999987532 22 2233322 24579999
Q ss_pred CCCchhh
Q psy5889 123 RGNHESA 129 (326)
Q Consensus 123 rGNHE~~ 129 (326)
+||||..
T Consensus 77 ~GNHD~~ 83 (240)
T cd07402 77 PGNHDDR 83 (240)
T ss_pred CCCCCCH
Confidence 9999974
No 57
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.16 E-value=4.6e-05 Score=77.50 Aligned_cols=113 Identities=19% Similarity=0.228 Sum_probs=61.3
Q ss_pred cCCeeEEecCC-CCH----HHHHHhHHcC-CC--------CCCceEEEeccccCC-CCCc---------------HHHHH
Q psy5889 57 TTPLKICGDIH-GQY----NDLLGLFSYG-KP--------PPTSTYLFLGDYVDR-GKHS---------------IETIC 106 (326)
Q Consensus 57 ~~~i~viGDIH-G~~----~~L~~il~~~-g~--------~~~~~~vfLGD~VDR-G~~s---------------~evl~ 106 (326)
+..+++|+|+| |.. ..+..+++.+ |. ...+.+|++||++|. |..+ .++..
T Consensus 243 ~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~ 322 (504)
T PRK04036 243 KVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAE 322 (504)
T ss_pred ccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHH
Confidence 45789999999 652 2233333322 21 223679999999994 3211 13444
Q ss_pred HHHHhhhcCCCcEEEECCCchhhhhhhh-hCchHHHHHHhhHHHHH-HHHhhhccCceEEEEcC-eEEEecCCC
Q psy5889 107 LLFAYKIRYPDNIYLLRGNHESANINKI-YGFYEECKRRYDIKLWK-KFTDCFNCMPVAAVVDH-KIFCCHGGL 177 (326)
Q Consensus 107 lL~~lk~~~p~~v~llrGNHE~~~~~~~-~gf~~e~~~~~~~~~~~-~~~~~f~~LP~~~~i~~-~il~vHgGi 177 (326)
+|..+. ..-.|++++||||....... -.+.... . ..+. .-..++.. |....+++ +++++||-.
T Consensus 323 ~L~~L~--~~i~V~~ipGNHD~~~~~lPQ~~l~~~l-~----~~l~~~~v~~lsN-P~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 323 YLKQIP--EDIKIIISPGNHDAVRQAEPQPAFPEEI-R----SLFPEHNVTFVSN-PALVNLHGVDVLIYHGRS 388 (504)
T ss_pred HHHhhh--cCCeEEEecCCCcchhhccCCCCccHHH-H----HhcCcCCeEEecC-CeEEEECCEEEEEECCCC
Confidence 454443 23469999999997643211 1121111 1 1111 12344444 66555554 789999954
No 58
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=98.15 E-value=0.00011 Score=68.01 Aligned_cols=71 Identities=13% Similarity=0.007 Sum_probs=43.2
Q ss_pred CeeEEecCCCCH----------------HHHHHhHHcCCC--CCCceEEEeccccCCCCCcH---HHHHHHHH-hhh-cC
Q psy5889 59 PLKICGDIHGQY----------------NDLLGLFSYGKP--PPTSTYLFLGDYVDRGKHSI---ETICLLFA-YKI-RY 115 (326)
Q Consensus 59 ~i~viGDIHG~~----------------~~L~~il~~~g~--~~~~~~vfLGD~VDRG~~s~---evl~lL~~-lk~-~~ 115 (326)
++++++|+|-.. ..|.++++.+.. +..+-++++||+++.|...- +....+.. ++. ..
T Consensus 6 ~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (262)
T cd07395 6 YFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLDP 85 (262)
T ss_pred EEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhccC
Confidence 467888888753 134555555432 24467889999999887541 11222221 221 12
Q ss_pred CCcEEEECCCchhh
Q psy5889 116 PDNIYLLRGNHESA 129 (326)
Q Consensus 116 p~~v~llrGNHE~~ 129 (326)
+-.++.++||||..
T Consensus 86 ~vp~~~i~GNHD~~ 99 (262)
T cd07395 86 DIPLVCVCGNHDVG 99 (262)
T ss_pred CCcEEEeCCCCCCC
Confidence 34699999999974
No 59
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=98.10 E-value=3.5e-05 Score=72.00 Aligned_cols=70 Identities=16% Similarity=0.315 Sum_probs=45.6
Q ss_pred eeEEecCCCCHHHHHHhHHc---CCCCCCceEEEeccccCCCCC-cHHHH----------HHHHHh--hhcCCCcEEEEC
Q psy5889 60 LKICGDIHGQYNDLLGLFSY---GKPPPTSTYLFLGDYVDRGKH-SIETI----------CLLFAY--KIRYPDNIYLLR 123 (326)
Q Consensus 60 i~viGDIHG~~~~L~~il~~---~g~~~~~~~vfLGD~VDRG~~-s~evl----------~lL~~l--k~~~p~~v~llr 123 (326)
|+|+||+||+++.+.+.++. ....+.+-+|++||+-..+.. ..+.+ ++.--+ ....|-.+++|.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 57999999999998764433 233466889999999755433 23222 111111 223566689999
Q ss_pred CCchhh
Q psy5889 124 GNHESA 129 (326)
Q Consensus 124 GNHE~~ 129 (326)
||||..
T Consensus 81 GNHE~~ 86 (262)
T cd00844 81 GNHEAS 86 (262)
T ss_pred CCCCCH
Confidence 999974
No 60
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=98.04 E-value=9e-05 Score=67.73 Aligned_cols=64 Identities=22% Similarity=0.253 Sum_probs=39.8
Q ss_pred eeEEecCCCC---------HH----HHH-H---hHHcCCCCCCceEEEeccccCCCCCc--HHHHHHHHHhhhcCCCcEE
Q psy5889 60 LKICGDIHGQ---------YN----DLL-G---LFSYGKPPPTSTYLFLGDYVDRGKHS--IETICLLFAYKIRYPDNIY 120 (326)
Q Consensus 60 i~viGDIHG~---------~~----~L~-~---il~~~g~~~~~~~vfLGD~VDRG~~s--~evl~lL~~lk~~~p~~v~ 120 (326)
+++++|||-. +. ++. + .++.+ .++.+-+|+.||++++++.. .+.+.+|.++ |..++
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~-~~~~D~viiaGDl~~~~~~~~~~~~l~~l~~l----~~~v~ 75 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNV-VAPEDIVLIPGDISWAMKLEEAKLDLAWIDAL----PGTKV 75 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhc-CCCCCEEEEcCCCccCCChHHHHHHHHHHHhC----CCCeE
Confidence 4789999955 11 222 2 23322 23567788999999887633 2333333332 34589
Q ss_pred EECCCchh
Q psy5889 121 LLRGNHES 128 (326)
Q Consensus 121 llrGNHE~ 128 (326)
++.||||.
T Consensus 76 ~V~GNHD~ 83 (232)
T cd07393 76 LLKGNHDY 83 (232)
T ss_pred EEeCCccc
Confidence 99999997
No 61
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.03 E-value=1.7e-05 Score=72.33 Aligned_cols=199 Identities=17% Similarity=0.231 Sum_probs=105.1
Q ss_pred eEEecCCCC------HHHHHHhHHcCCCCCCceEEEeccccCC--CCC-----cHHHHHHHHHhhhcCCCcEEEECCCch
Q psy5889 61 KICGDIHGQ------YNDLLGLFSYGKPPPTSTYLFLGDYVDR--GKH-----SIETICLLFAYKIRYPDNIYLLRGNHE 127 (326)
Q Consensus 61 ~viGDIHG~------~~~L~~il~~~g~~~~~~~vfLGD~VDR--G~~-----s~evl~lL~~lk~~~p~~v~llrGNHE 127 (326)
+.|+|+|=. .+.|.+.++... +..+.+.+|||++|- |.. --+|...|..+. +...+++.+.||||
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a-~~G~~v~~i~GN~D 78 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLA-RKGTRVYYIHGNHD 78 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHH-hcCCeEEEecCchH
Confidence 368999954 334555665432 255789999999972 332 235555555443 45678999999999
Q ss_pred hhhhhhhhCchHHHHHHhhHHHHHHHHhhhccCceEEEE---cCeEEEecCCCCCCCC-Ccccccc-----------CCC
Q psy5889 128 SANINKIYGFYEECKRRYDIKLWKKFTDCFNCMPVAAVV---DHKIFCCHGGLSPQLT-SFSQITN-----------LPR 192 (326)
Q Consensus 128 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP~~~~i---~~~il~vHgGi~p~~~-~l~~i~~-----------i~r 192 (326)
.. +...++ .-..-+.-+|-...+ +.+++++||..--... .....+. +..
T Consensus 79 fl-l~~~f~---------------~~~g~~~l~~~~~~~~l~g~~~Ll~HGD~f~t~~~~y~~~r~~~~~~~~~~lflnl 142 (237)
T COG2908 79 FL-LGKRFA---------------QEAGGMTLLPDPIVLDLYGKRILLAHGDTFCTDDRAYQWFRYKVHWAWLQLLFLNL 142 (237)
T ss_pred HH-HHHHHH---------------hhcCceEEcCcceeeeecCcEEEEEeCCcccchHHHHHHHHHHcccHHHHHHHHHh
Confidence 54 322111 000112233333333 5789999996532110 0000000 011
Q ss_pred CCCCCCCCcccceecCCCCCccCCcccCCCCCcc---ccChHHHHHHHHhcCCceEEEeccccccCeEEEcCceEEEEEc
Q psy5889 193 PTEVPEEGLLVDLLWSDPEENISGWGHNDRGVSY---TFGADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKKLVTLFS 269 (326)
Q Consensus 193 p~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~g~---~Fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfS 269 (326)
|+.. ...+..-+|+.. .|.+....... -..++++.+-++++|++.+|.||+..+..-....-.+|.+
T Consensus 143 ~l~~--R~ri~~k~r~~s-----~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i~~~~yi~l--- 212 (237)
T COG2908 143 PLRV--RRRIAYKIRSLS-----SWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHNIPGITYINL--- 212 (237)
T ss_pred HHHH--HHHHHHHHHHhh-----HHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhccCCCceEEec---
Confidence 1100 000111234433 23332222221 2456778889999999999999999876555433111111
Q ss_pred cCCCCCCCCCeEEEEEEcCCCce
Q psy5889 270 APNYCGEFDNAGAMMIVDENLTC 292 (326)
Q Consensus 270 a~~y~~~~~N~gavl~i~~~~~~ 292 (326)
|.....++++.++.+...
T Consensus 213 -----GdW~~~~s~~~v~~~~~~ 230 (237)
T COG2908 213 -----GDWVSEGSILEVDDGGLE 230 (237)
T ss_pred -----CcchhcceEEEEecCcEE
Confidence 222356889999887543
No 62
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=98.03 E-value=0.00014 Score=64.63 Aligned_cols=70 Identities=11% Similarity=0.016 Sum_probs=44.0
Q ss_pred CCeeEEecCCCCHH------------HHHHhHHcCCCCCCceEEEeccccCCCCCc---HHHHHHHHHhhhcCCCcEEEE
Q psy5889 58 TPLKICGDIHGQYN------------DLLGLFSYGKPPPTSTYLFLGDYVDRGKHS---IETICLLFAYKIRYPDNIYLL 122 (326)
Q Consensus 58 ~~i~viGDIHG~~~------------~L~~il~~~g~~~~~~~vfLGD~VDRG~~s---~evl~lL~~lk~~~p~~v~ll 122 (326)
.++.+++|+|-... .+..+.+.+.....+.+|++||+++.+... .+.+..++.......-.++++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~ 82 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAAT 82 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 46899999996222 111221222233457899999999977653 555555544333334568999
Q ss_pred CCCch
Q psy5889 123 RGNHE 127 (326)
Q Consensus 123 rGNHE 127 (326)
.||||
T Consensus 83 ~GNHD 87 (199)
T cd07383 83 FGNHD 87 (199)
T ss_pred CccCC
Confidence 99999
No 63
>KOG0376|consensus
Probab=98.00 E-value=8.7e-07 Score=87.36 Aligned_cols=239 Identities=11% Similarity=-0.010 Sum_probs=162.5
Q ss_pred cCCHHHHHHHHHHHHHHHHhCCCceeecC----CeeEEecCCCCHHHHHHhHHcCCCCCCce-EEEeccccCCCCCcHHH
Q psy5889 30 NLDQADIVIMIRAARDIFMAQPMFLYLTT----PLKICGDIHGQYNDLLGLFSYGKPPPTST-YLFLGDYVDRGKHSIET 104 (326)
Q Consensus 30 ~~~~~~~~~l~~~~~~il~~ep~~l~i~~----~i~viGDIHG~~~~L~~il~~~g~~~~~~-~vfLGD~VDRG~~s~ev 104 (326)
.|...++..+++.+.+++..+|+...... -.+.++|.||.+.|+..+++.- |...+ |++-|++++++....+.
T Consensus 14 ~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l~~~~~A 91 (476)
T KOG0376|consen 14 ALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVMALGEFKKA 91 (476)
T ss_pred hcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--chhhheeeeccHHHHhHHHHHHH
Confidence 57778889999999999999998776632 3789999999999999998864 44444 99999999999999999
Q ss_pred HHHHHHhhhcCCCcEEEECCCchhhhhhhhhCchHHHHHHhh---HHHHHHHHhhhccCceEEEEcCeEEEecCCCCCC-
Q psy5889 105 ICLLFAYKIRYPDNIYLLRGNHESANINKIYGFYEECKRRYD---IKLWKKFTDCFNCMPVAAVVDHKIFCCHGGLSPQ- 180 (326)
Q Consensus 105 l~lL~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~---~~~~~~~~~~f~~LP~~~~i~~~il~vHgGi~p~- 180 (326)
+..|...+...|+...+.|++||+..+...++|..+....++ .-+...+...+ ..|++..+.+.++ -|.-++-.
T Consensus 92 ~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~~s~~~~~~~~~~-~~~i~~~y~g~~l-e~~kvt~e~ 169 (476)
T KOG0376|consen 92 LLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDKKSVVEMKIDEED-MDLIESDYSGPVL-EDHKVTLEF 169 (476)
T ss_pred HHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCCcccccccccccc-ccccccccCCccc-ccchhhHHH
Confidence 999999999999999999999999999888888766555441 11111111111 1113333333222 11111100
Q ss_pred -------------CC-----C-ccc----cccCCCCCCCCCCCcccceecCCCCCccCCcccCCCCCccccChHHHHHHH
Q psy5889 181 -------------LT-----S-FSQ----ITNLPRPTEVPEEGLLVDLLWSDPEENISGWGHNDRGVSYTFGADMVHEFL 237 (326)
Q Consensus 181 -------------~~-----~-l~~----i~~i~rp~~~~~~~~~~dllWsdP~~~~~~~~~~~rg~g~~Fg~~~~~~fl 237 (326)
+. + +++ ++.+..+.+. ....+..|+++......|.+..++.+...++.....||
T Consensus 170 vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~---~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~yl 246 (476)
T KOG0376|consen 170 VKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEI---SVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYL 246 (476)
T ss_pred HHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEe---ecCCCceEEecCCccccccchhhhHhhcCCCCCccccc
Confidence 00 0 011 1111111111 14567899999866666777788888888888888999
Q ss_pred HhcCCceEEEecccc------------ccCeEEEcC---ceEEEEEccCCCCC
Q psy5889 238 KKFNIDLVCRAHQVV------------EEGYEFFAD---KKLVTLFSAPNYCG 275 (326)
Q Consensus 238 ~~~~l~~iIRgH~~~------------~~G~~~~~~---~~~iTvfSa~~y~~ 275 (326)
.+.++.-+.+.|.-+ ..+|...++ +.+.++|+++.++.
T Consensus 247 fngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~ 299 (476)
T KOG0376|consen 247 FNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVK 299 (476)
T ss_pred ccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchh
Confidence 998888888888754 223333222 24889999998874
No 64
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.84 E-value=3.5e-05 Score=71.81 Aligned_cols=73 Identities=21% Similarity=0.199 Sum_probs=48.6
Q ss_pred CeeEEecCC-C------------CHHHHHHhHHcCCCCCCceEEEeccccCCCCC-cHHHHHHHHHhhhcCCCcEEEECC
Q psy5889 59 PLKICGDIH-G------------QYNDLLGLFSYGKPPPTSTYLFLGDYVDRGKH-SIETICLLFAYKIRYPDNIYLLRG 124 (326)
Q Consensus 59 ~i~viGDIH-G------------~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~-s~evl~lL~~lk~~~p~~v~llrG 124 (326)
++.+|+|+| + ....|.++++.+.....+-+|++||+++.|.. +.+-+..+...-...+-.++.+.|
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~G 81 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLG 81 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecC
Confidence 678999999 2 24556666666644446779999999998873 223333333322233457999999
Q ss_pred Cchhhhh
Q psy5889 125 NHESANI 131 (326)
Q Consensus 125 NHE~~~~ 131 (326)
|||....
T Consensus 82 NHD~~~~ 88 (267)
T cd07396 82 NHDLYNP 88 (267)
T ss_pred ccccccc
Confidence 9998643
No 65
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.84 E-value=3.3e-05 Score=71.72 Aligned_cols=72 Identities=24% Similarity=0.280 Sum_probs=48.7
Q ss_pred CCeeEEecCCC-C-----------HHHHHHhHHcCCCCCCceEEEeccccCCCCCcHHHH----HHHHHhhhcCCCcEEE
Q psy5889 58 TPLKICGDIHG-Q-----------YNDLLGLFSYGKPPPTSTYLFLGDYVDRGKHSIETI----CLLFAYKIRYPDNIYL 121 (326)
Q Consensus 58 ~~i~viGDIHG-~-----------~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl----~lL~~lk~~~p~~v~l 121 (326)
++++.++|+|- . ...|.++++.+.....+.+++.||++|+...+.+.. .++..|+...|-.+++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 57899999993 2 234555555444445678999999999886555443 3444444333357999
Q ss_pred ECCCchhh
Q psy5889 122 LRGNHESA 129 (326)
Q Consensus 122 lrGNHE~~ 129 (326)
+.||||..
T Consensus 81 i~GNHD~~ 88 (253)
T TIGR00619 81 ISGNHDSA 88 (253)
T ss_pred EccCCCCh
Confidence 99999985
No 66
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.79 E-value=0.00019 Score=61.69 Aligned_cols=46 Identities=24% Similarity=0.240 Sum_probs=29.1
Q ss_pred CCceEEEeccccCCCCCc-HHH----HHHHHHhhhcC-CCcEEEECCCchhh
Q psy5889 84 PTSTYLFLGDYVDRGKHS-IET----ICLLFAYKIRY-PDNIYLLRGNHESA 129 (326)
Q Consensus 84 ~~~~~vfLGD~VDRG~~s-~ev----l~lL~~lk~~~-p~~v~llrGNHE~~ 129 (326)
..+.+|++||++|.+... .+. +..+..+.... +..+++++||||..
T Consensus 38 ~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 38 QPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred CCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 457899999999987642 222 22222221111 34699999999974
No 67
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.75 E-value=4.5e-05 Score=73.77 Aligned_cols=72 Identities=24% Similarity=0.336 Sum_probs=49.0
Q ss_pred CCeeEEecCC-C-----------CHHHHHHhHHcCCCCCCceEEEeccccCCC-CCcHHHHHHHHH--hh--hcCCCcEE
Q psy5889 58 TPLKICGDIH-G-----------QYNDLLGLFSYGKPPPTSTYLFLGDYVDRG-KHSIETICLLFA--YK--IRYPDNIY 120 (326)
Q Consensus 58 ~~i~viGDIH-G-----------~~~~L~~il~~~g~~~~~~~vfLGD~VDRG-~~s~evl~lL~~--lk--~~~p~~v~ 120 (326)
++++.++|+| | +...|.++++.+.....+.+|+.||++|+. +.+.+++.++.. ++ ...+-.++
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~ 80 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLH 80 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 5789999999 4 234556666555555567899999999985 445555544433 11 12345799
Q ss_pred EECCCchhh
Q psy5889 121 LLRGNHESA 129 (326)
Q Consensus 121 llrGNHE~~ 129 (326)
+|.||||..
T Consensus 81 ~I~GNHD~~ 89 (340)
T PHA02546 81 VLVGNHDMY 89 (340)
T ss_pred EEccCCCcc
Confidence 999999974
No 68
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.63 E-value=0.00014 Score=64.93 Aligned_cols=29 Identities=17% Similarity=0.067 Sum_probs=22.6
Q ss_pred ChHHHHHHHHhcCCceEEEeccccccCeE
Q psy5889 229 GADMVHEFLKKFNIDLVCRAHQVVEEGYE 257 (326)
Q Consensus 229 g~~~~~~fl~~~~l~~iIRgH~~~~~G~~ 257 (326)
....+.+.++..+.+.+|.||+..+.-..
T Consensus 177 ~~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 205 (217)
T cd07398 177 FEEAVARLARRKGVDGVICGHTHRPALHE 205 (217)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCCeEE
Confidence 45567778889999999999998764333
No 69
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.61 E-value=0.00015 Score=63.19 Aligned_cols=56 Identities=18% Similarity=0.158 Sum_probs=33.0
Q ss_pred HHhHHcCCCCCCceEEEeccccCCCCCcH-HHHHHH-HHhhhcCCCcEEEECCCchhh
Q psy5889 74 LGLFSYGKPPPTSTYLFLGDYVDRGKHSI-ETICLL-FAYKIRYPDNIYLLRGNHESA 129 (326)
Q Consensus 74 ~~il~~~g~~~~~~~vfLGD~VDRG~~s~-evl~lL-~~lk~~~p~~v~llrGNHE~~ 129 (326)
.++.+.+.....+.+|++||++|...... +....+ .......+..+++++||||..
T Consensus 31 ~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 31 ERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred HHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccc
Confidence 33333333344588999999998654332 222111 111223455799999999985
No 70
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.54 E-value=0.00012 Score=65.26 Aligned_cols=73 Identities=22% Similarity=0.295 Sum_probs=48.5
Q ss_pred CeeEEecCC-CCH--------------HHHHHhHHcCCCCCCceEEEeccccCCCCCcHHHHHHHHHhhhcC---CCcEE
Q psy5889 59 PLKICGDIH-GQY--------------NDLLGLFSYGKPPPTSTYLFLGDYVDRGKHSIETICLLFAYKIRY---PDNIY 120 (326)
Q Consensus 59 ~i~viGDIH-G~~--------------~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~---p~~v~ 120 (326)
+++.++|+| |.. ..|.++++.+.....+.+|+.||++|....+.+.+..+...-... ...++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 578999999 321 235666665544456789999999998876555444333321111 45799
Q ss_pred EECCCchhhhh
Q psy5889 121 LLRGNHESANI 131 (326)
Q Consensus 121 llrGNHE~~~~ 131 (326)
++.||||....
T Consensus 81 ~~~GNHD~~~~ 91 (223)
T cd00840 81 IIAGNHDSPSR 91 (223)
T ss_pred EecCCCCCccc
Confidence 99999998654
No 71
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=97.53 E-value=0.00046 Score=64.68 Aligned_cols=70 Identities=17% Similarity=0.095 Sum_probs=42.0
Q ss_pred CCeeEEecCCC----CHHHHHHhHHcCCCCCCceEEEeccccCCC-CCc---H-HHHHHHHHhhhcCCCcEEEECCCchh
Q psy5889 58 TPLKICGDIHG----QYNDLLGLFSYGKPPPTSTYLFLGDYVDRG-KHS---I-ETICLLFAYKIRYPDNIYLLRGNHES 128 (326)
Q Consensus 58 ~~i~viGDIHG----~~~~L~~il~~~g~~~~~~~vfLGD~VDRG-~~s---~-evl~lL~~lk~~~p~~v~llrGNHE~ 128 (326)
-+++|+||.|. ....+.++.+. ....+-+|++||+++.+ ..+ . +.+..+..+... -.++.++||||.
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~--~P~~~~~GNHD~ 80 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASY--VPYMVTPGNHEA 80 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhc--CCcEEcCccccc
Confidence 47899999995 34444444443 23456788999999544 322 1 122222222222 358999999998
Q ss_pred hhh
Q psy5889 129 ANI 131 (326)
Q Consensus 129 ~~~ 131 (326)
...
T Consensus 81 ~~~ 83 (294)
T cd00839 81 DYN 83 (294)
T ss_pred ccC
Confidence 643
No 72
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.53 E-value=0.00033 Score=64.99 Aligned_cols=28 Identities=25% Similarity=0.299 Sum_probs=23.8
Q ss_pred HHHHHHhcCCceEEEeccccccCeEEEc
Q psy5889 233 VHEFLKKFNIDLVCRAHQVVEEGYEFFA 260 (326)
Q Consensus 233 ~~~fl~~~~l~~iIRgH~~~~~G~~~~~ 260 (326)
+.+.+++.++++++.||.....+.+..+
T Consensus 190 ~~~ll~~~~v~~vl~GH~H~~~~~~p~h 217 (256)
T cd07401 190 FKDLLKKYNVTAYLCGHLHPLGGLEPVH 217 (256)
T ss_pred HHHHHHhcCCcEEEeCCccCCCcceeee
Confidence 7788999999999999999988855544
No 73
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.45 E-value=0.00019 Score=71.11 Aligned_cols=72 Identities=21% Similarity=0.277 Sum_probs=46.6
Q ss_pred CCeeEEecCC-CC-H------HH----HHHhHHcCCCCCCceEEEeccccCCCCCcHHHH----HHHHHhhhcCCCcEEE
Q psy5889 58 TPLKICGDIH-GQ-Y------ND----LLGLFSYGKPPPTSTYLFLGDYVDRGKHSIETI----CLLFAYKIRYPDNIYL 121 (326)
Q Consensus 58 ~~i~viGDIH-G~-~------~~----L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl----~lL~~lk~~~p~~v~l 121 (326)
++++.++|+| |. + .+ |.++.+.+.....+.+|+.||++|++..+.+.. .++..|+. .+-.+++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~-~~~~v~~ 79 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQ-TGCQLVV 79 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHh-cCCcEEE
Confidence 5789999999 32 1 11 334444444455678999999999986554332 33334442 2356999
Q ss_pred ECCCchhhh
Q psy5889 122 LRGNHESAN 130 (326)
Q Consensus 122 lrGNHE~~~ 130 (326)
+.||||...
T Consensus 80 I~GNHD~~~ 88 (407)
T PRK10966 80 LAGNHDSVA 88 (407)
T ss_pred EcCCCCChh
Confidence 999999753
No 74
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.45 E-value=0.00033 Score=64.04 Aligned_cols=69 Identities=17% Similarity=0.175 Sum_probs=43.8
Q ss_pred CCeeEEecCC-CCHHH----------------HHHhHHcCCCCCCceEEEeccccCCCCCc---HHHHHHHHHhhhcCCC
Q psy5889 58 TPLKICGDIH-GQYND----------------LLGLFSYGKPPPTSTYLFLGDYVDRGKHS---IETICLLFAYKIRYPD 117 (326)
Q Consensus 58 ~~i~viGDIH-G~~~~----------------L~~il~~~g~~~~~~~vfLGD~VDRG~~s---~evl~lL~~lk~~~p~ 117 (326)
.+..||+|+| |--.. |.++.+.......+.+|++||+.+..... .++..++..+ ..
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~----~~ 90 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVT----FR 90 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhc----CC
Confidence 6789999999 53222 22333333333457899999999765542 2333344332 24
Q ss_pred cEEEECCCchhhh
Q psy5889 118 NIYLLRGNHESAN 130 (326)
Q Consensus 118 ~v~llrGNHE~~~ 130 (326)
.+++++||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 7999999999753
No 75
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.41 E-value=0.00025 Score=61.50 Aligned_cols=43 Identities=35% Similarity=0.478 Sum_probs=31.9
Q ss_pred CCceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhh
Q psy5889 84 PTSTYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANI 131 (326)
Q Consensus 84 ~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~ 131 (326)
+.+.++++||++++|..+.. +.++..+ +..+++++||||....
T Consensus 42 ~~d~vi~~GDl~~~~~~~~~-~~~l~~~----~~~~~~v~GNHD~~~~ 84 (168)
T cd07390 42 PDDTVYHLGDFSFGGKAGTE-LELLSRL----NGRKHLIKGNHDSSLE 84 (168)
T ss_pred CCCEEEEeCCCCCCCChHHH-HHHHHhC----CCCeEEEeCCCCchhh
Confidence 45889999999999986543 4444333 3569999999997644
No 76
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=97.19 E-value=0.013 Score=60.24 Aligned_cols=69 Identities=19% Similarity=0.352 Sum_probs=48.4
Q ss_pred ChHHHHHHHHhcCCc----eEEEeccccc--cCeEE-EcCceEEEE---EccCCCCCCCCCeEEEEEEcCCCceEEEEEe
Q psy5889 229 GADMVHEFLKKFNID----LVCRAHQVVE--EGYEF-FADKKLVTL---FSAPNYCGEFDNAGAMMIVDENLTCSFHIMK 298 (326)
Q Consensus 229 g~~~~~~fl~~~~l~----~iIRgH~~~~--~G~~~-~~~~~~iTv---fSa~~y~~~~~N~gavl~i~~~~~~~~~~~~ 298 (326)
.++..++.|+..|++ .||-||+||. +|-.. .++||++.| ||.+ |...+ .-|++-.|...-......=+
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDGGfskA-Yqk~T-GIAGYTLiyNS~gl~L~~H~ 584 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDGGFSKA-YQKTT-GIAGYTLIYNSYGLQLVAHQ 584 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcChhhhh-hcccc-CccceEEEecCCcceeccCC
Confidence 467788899999998 9999999996 77654 578999998 6665 44433 34455445555555555545
Q ss_pred c
Q psy5889 299 P 299 (326)
Q Consensus 299 ~ 299 (326)
|
T Consensus 585 p 585 (640)
T PF06874_consen 585 P 585 (640)
T ss_pred C
Confidence 5
No 77
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=97.19 E-value=0.0011 Score=61.18 Aligned_cols=74 Identities=19% Similarity=0.305 Sum_probs=51.5
Q ss_pred CCeeEEecCCCC------HHHHHHhHHcCCCCCCceEEEeccccCCCCC-cHHHHHHHHHhhhcCCCcEEEECCCchhhh
Q psy5889 58 TPLKICGDIHGQ------YNDLLGLFSYGKPPPTSTYLFLGDYVDRGKH-SIETICLLFAYKIRYPDNIYLLRGNHESAN 130 (326)
Q Consensus 58 ~~i~viGDIHG~------~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~-s~evl~lL~~lk~~~p~~v~llrGNHE~~~ 130 (326)
++++.|+|+|-. ...+.++++.+...+.+.+|+.||+.++|.. +.+-+..++. +...|..+++++||||.+.
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~~~~~~~~~~~l~-~~~~~~~~~~vpGNHD~~~ 79 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGEPEEYRRLKELLA-RLELPAPVIVVPGNHDARV 79 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCCHHHHHHHHHHHh-hccCCCceEeeCCCCcCCc
Confidence 468899999976 3345566676666666889999999999642 2222222222 2356778999999999976
Q ss_pred hh
Q psy5889 131 IN 132 (326)
Q Consensus 131 ~~ 132 (326)
..
T Consensus 80 ~~ 81 (301)
T COG1409 80 VN 81 (301)
T ss_pred hH
Confidence 54
No 78
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=97.16 E-value=0.0033 Score=53.88 Aligned_cols=119 Identities=19% Similarity=0.306 Sum_probs=80.5
Q ss_pred eEEecCCCCHHHHHHhHHcCC--CCCCceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhhhhhCch
Q psy5889 61 KICGDIHGQYNDLLGLFSYGK--PPPTSTYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANINKIYGFY 138 (326)
Q Consensus 61 ~viGDIHG~~~~L~~il~~~g--~~~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~~~~gf~ 138 (326)
.|+||+||+++.+.+-++... ..+-+-++++||+..-...+-+.-.++ .=....|-..+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~~~y~-~g~~~~pipTyf~ggn~~----------- 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEELEAYK-DGSKKVPIPTYFLGGNNP----------- 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhhHHHHh-cCCccCCCCEEEECCCCC-----------
Confidence 489999999999987666532 235578999999997666553433333 335567888999999998
Q ss_pred HHHHHHhhHHHHHHHHhhhccCceEEEEcCeEEEecCCCCCCCCCccccccCCCCCCCCCCCcccceecCCCCCccCCcc
Q psy5889 139 EECKRRYDIKLWKKFTDCFNCMPVAAVVDHKIFCCHGGLSPQLTSFSQITNLPRPTEVPEEGLLVDLLWSDPEENISGWG 218 (326)
Q Consensus 139 ~e~~~~~~~~~~~~~~~~f~~LP~~~~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdP~~~~~~~~ 218 (326)
+-.||++|.=+. ++...+++. .+.
T Consensus 69 ----------------------------~~DILlTh~wP~-gi~~~~~~~-------------------~~~-------- 92 (150)
T cd07380 69 ----------------------------GVDILLTSEWPK-GISKLSKVP-------------------FEE-------- 92 (150)
T ss_pred ----------------------------CCCEEECCCCch-hhhhhCCCc-------------------ccc--------
Confidence 345888886321 111111110 000
Q ss_pred cCCCCCccccChHHHHHHHHhcCCceEEEecccc
Q psy5889 219 HNDRGVSYTFGADMVHEFLKKFNIDLVCRAHQVV 252 (326)
Q Consensus 219 ~~~rg~g~~Fg~~~~~~fl~~~~l~~iIRgH~~~ 252 (326)
.+..-|...+++++++..-++.+.||..+
T Consensus 93 -----~~~~~GS~~i~~l~~~lkPrYhf~gh~~~ 121 (150)
T cd07380 93 -----TLLICGSDLIAELAKKLKPRYHFAGLEGV 121 (150)
T ss_pred -----cccCCCCHHHHHHHHHcCCCeEeecCCCc
Confidence 12345888999999999999999999754
No 79
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.13 E-value=0.0009 Score=66.29 Aligned_cols=54 Identities=19% Similarity=0.256 Sum_probs=42.3
Q ss_pred cCCeeEEecCCCC------------HHHHHHhHHcCCCCCCceEEEeccccCCCCCcHHHHHHHHH
Q psy5889 57 TTPLKICGDIHGQ------------YNDLLGLFSYGKPPPTSTYLFLGDYVDRGKHSIETICLLFA 110 (326)
Q Consensus 57 ~~~i~viGDIHG~------------~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~lL~~ 110 (326)
.+++++++|+|-- +..|.++++.+.....+-+|+.||+.|+..-|.+++..++.
T Consensus 3 ~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~ 68 (405)
T TIGR00583 3 TIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLR 68 (405)
T ss_pred ceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHH
Confidence 3689999999942 55777888877666678899999999999988888755443
No 80
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=96.91 E-value=0.0031 Score=57.37 Aligned_cols=73 Identities=15% Similarity=0.237 Sum_probs=44.4
Q ss_pred CCeeEEecCCCCHHHHHHhHHcCCCCCCceEEEeccccCCCCCcHH-------------------------HHHHHHHhh
Q psy5889 58 TPLKICGDIHGQYNDLLGLFSYGKPPPTSTYLFLGDYVDRGKHSIE-------------------------TICLLFAYK 112 (326)
Q Consensus 58 ~~i~viGDIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~e-------------------------vl~lL~~lk 112 (326)
.+|..++|.||+++.|.++.+.+.-...|-++|+||++-....+-| .++-++..-
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~L 85 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRIL 85 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHHH
Confidence 4689999999999999999887765567889999999864443332 233333332
Q ss_pred hcCCCcEEEECCCchhhh
Q psy5889 113 IRYPDNIYLLRGNHESAN 130 (326)
Q Consensus 113 ~~~p~~v~llrGNHE~~~ 130 (326)
-..+-.+++|+||||...
T Consensus 86 ~~~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 86 GELGVPVFVVPGNMDAPE 103 (255)
T ss_dssp HCC-SEEEEE--TTS-SH
T ss_pred HhcCCcEEEecCCCCchH
Confidence 345668999999999853
No 81
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=96.83 E-value=0.0017 Score=59.61 Aligned_cols=68 Identities=18% Similarity=0.211 Sum_probs=38.9
Q ss_pred eEEecCC--CCH------HHHHHhHHcCCC--CCCceEEEeccccCCCCC------------c----HHHHHHHHHhhhc
Q psy5889 61 KICGDIH--GQY------NDLLGLFSYGKP--PPTSTYLFLGDYVDRGKH------------S----IETICLLFAYKIR 114 (326)
Q Consensus 61 ~viGDIH--G~~------~~L~~il~~~g~--~~~~~~vfLGD~VDRG~~------------s----~evl~lL~~lk~~ 114 (326)
++|+|+| +.. ..|.+.++...- ...+.+|++||++|+... . .++..++..+.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~-- 79 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVP-- 79 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcc--
Confidence 6899999 331 233333332211 123789999999997310 0 12233333333
Q ss_pred CCCcEEEECCCchhhh
Q psy5889 115 YPDNIYLLRGNHESAN 130 (326)
Q Consensus 115 ~p~~v~llrGNHE~~~ 130 (326)
..-.|+++.||||...
T Consensus 80 ~~~~v~~ipGNHD~~~ 95 (243)
T cd07386 80 SHIKIIIIPGNHDAVR 95 (243)
T ss_pred cCCeEEEeCCCCCccc
Confidence 2357999999999853
No 82
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=96.67 E-value=0.003 Score=59.72 Aligned_cols=72 Identities=21% Similarity=0.204 Sum_probs=48.8
Q ss_pred CCeeEEecCCCCHHH--HHHhHHcCCCCCCceEEEeccccCC-CCC-cHHHHHHHHHhhhcCCCcEEEECCCchhhhh
Q psy5889 58 TPLKICGDIHGQYND--LLGLFSYGKPPPTSTYLFLGDYVDR-GKH-SIETICLLFAYKIRYPDNIYLLRGNHESANI 131 (326)
Q Consensus 58 ~~i~viGDIHG~~~~--L~~il~~~g~~~~~~~vfLGD~VDR-G~~-s~evl~lL~~lk~~~p~~v~llrGNHE~~~~ 131 (326)
-+|+-++|+|-.... ..+.+........+-+++.|||+|+ .+. .-.+...|..|+ .|-.++++.||||...-
T Consensus 45 ~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L~--~~~gv~av~GNHd~~~~ 120 (284)
T COG1408 45 LKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKLK--APLGVFAVLGNHDYGVD 120 (284)
T ss_pred eEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhhh--ccCCEEEEecccccccc
Confidence 369999999987665 2223333333333789999999995 444 445556665554 55679999999987543
No 83
>KOG3325|consensus
Probab=96.56 E-value=0.03 Score=47.69 Aligned_cols=116 Identities=28% Similarity=0.444 Sum_probs=82.4
Q ss_pred eeEEecCCC--CHHHHHHhHHcCCCCCC-ceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhhhhhC
Q psy5889 60 LKICGDIHG--QYNDLLGLFSYGKPPPT-STYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANINKIYG 136 (326)
Q Consensus 60 i~viGDIHG--~~~~L~~il~~~g~~~~-~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~~~~g 136 (326)
+.++||+|= ...+|-.-|++.-.|.. .+++++|++. |.|++++|..+. +.++++||--|...
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlc-----s~e~~dylk~l~----~dvhiVrGeFD~~~------ 67 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLC-----SKESYDYLKTLS----SDVHIVRGEFDENL------ 67 (183)
T ss_pred EEEeccccCCccccccCHHHHhccCCCceeEEEEeCCcc-----hHHHHHHHHhhC----CCcEEEecccCccc------
Confidence 679999995 44556666666656655 5699999976 889999998775 68999999877631
Q ss_pred chHHHHHHhhHHHHHHHHhhhccCceEEEE--c-CeEEEecCCCCCCCCCccccccCCCCCCCCCCCcccceecCCCCCc
Q psy5889 137 FYEECKRRYDIKLWKKFTDCFNCMPVAAVV--D-HKIFCCHGGLSPQLTSFSQITNLPRPTEVPEEGLLVDLLWSDPEEN 213 (326)
Q Consensus 137 f~~e~~~~~~~~~~~~~~~~f~~LP~~~~i--~-~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsdP~~~ 213 (326)
..|..-++ + =++-|+||-. . +=|.||.
T Consensus 68 ----------------------~yP~~kvvtvGqfkIG~chGhq---V-----------------------iP~gd~~-- 97 (183)
T KOG3325|consen 68 ----------------------KYPENKVVTVGQFKIGLCHGHQ---V-----------------------IPWGDPE-- 97 (183)
T ss_pred ----------------------cCCccceEEeccEEEEeecCcE---e-----------------------ecCCCHH--
Confidence 11322222 2 2789999842 1 3366765
Q ss_pred cCCcccCCCCCccccChHHHHHHHHhcCCceEEEeccccccCeEE
Q psy5889 214 ISGWGHNDRGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEF 258 (326)
Q Consensus 214 ~~~~~~~~rg~g~~Fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~ 258 (326)
++.-.-++.+++.++-||+..-+-|+.
T Consensus 98 ------------------sL~~LaRqldvDILl~G~Th~f~Aye~ 124 (183)
T KOG3325|consen 98 ------------------SLALLARQLDVDILLTGHTHKFEAYEH 124 (183)
T ss_pred ------------------HHHHHHHhcCCcEEEeCCceeEEEEEe
Confidence 566667788999999999998777764
No 84
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=96.54 E-value=0.0038 Score=54.53 Aligned_cols=48 Identities=25% Similarity=0.322 Sum_probs=30.6
Q ss_pred CCCceEEEeccccCCCCCcH--H---HHHHHHHhhh-cC----CCcEEEECCCchhhh
Q psy5889 83 PPTSTYLFLGDYVDRGKHSI--E---TICLLFAYKI-RY----PDNIYLLRGNHESAN 130 (326)
Q Consensus 83 ~~~~~~vfLGD~VDRG~~s~--e---vl~lL~~lk~-~~----p~~v~llrGNHE~~~ 130 (326)
...+.+|++||++|.+.... + .+..+..+.. .. +..++.++||||...
T Consensus 44 ~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 44 LKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred cCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 34578999999999887432 2 2222222211 11 356999999999864
No 85
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=96.50 E-value=0.052 Score=50.54 Aligned_cols=31 Identities=10% Similarity=0.091 Sum_probs=25.0
Q ss_pred cChHHHHHHHHhcCCceEEEeccccccCeEEEc
Q psy5889 228 FGADMVHEFLKKFNIDLVCRAHQVVEEGYEFFA 260 (326)
Q Consensus 228 Fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~ 260 (326)
-.++..+..|++.+-.+|.-||+. ++-+..+
T Consensus 203 l~~~~s~~il~~~~P~~vfsGhdH--~~C~~~h 233 (257)
T cd08163 203 LEPSLSEVILKAVQPVIAFSGDDH--DYCEVVH 233 (257)
T ss_pred cCHHHHHHHHHhhCCcEEEecCCC--ccceeEc
Confidence 478899999999999999999995 4545444
No 86
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=96.37 E-value=0.005 Score=55.02 Aligned_cols=46 Identities=22% Similarity=0.385 Sum_probs=33.4
Q ss_pred CCceEEEeccccCCCCCc--HHHHHHHHHhhhcCC----CcEEEECCCchhh
Q psy5889 84 PTSTYLFLGDYVDRGKHS--IETICLLFAYKIRYP----DNIYLLRGNHESA 129 (326)
Q Consensus 84 ~~~~~vfLGD~VDRG~~s--~evl~lL~~lk~~~p----~~v~llrGNHE~~ 129 (326)
..+-++||||++|.|+.+ .+....+..++..++ -.++.|.||||.-
T Consensus 42 ~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 42 QPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred CCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 457899999999999964 346666655543322 4678999999974
No 87
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=96.09 E-value=0.008 Score=55.08 Aligned_cols=66 Identities=26% Similarity=0.311 Sum_probs=43.5
Q ss_pred CeeEEecCCCCH---------HHHHHhHHcCCCC-CCceEEEeccccCCCCCcH-----HHHHHHHHhhhcCCCcEEEEC
Q psy5889 59 PLKICGDIHGQY---------NDLLGLFSYGKPP-PTSTYLFLGDYVDRGKHSI-----ETICLLFAYKIRYPDNIYLLR 123 (326)
Q Consensus 59 ~i~viGDIHG~~---------~~L~~il~~~g~~-~~~~~vfLGD~VDRG~~s~-----evl~lL~~lk~~~p~~v~llr 123 (326)
+++.++|+||.+ ..+.++++..... +..-++..||+++..+.+. .++..|..+. -. ++..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~g----~d-~~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNALG----YD-AVTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhcC----CC-EEee
Confidence 578999999887 4566666655433 3345677999999887643 4555554432 23 3456
Q ss_pred CCchhh
Q psy5889 124 GNHESA 129 (326)
Q Consensus 124 GNHE~~ 129 (326)
||||..
T Consensus 77 GNHe~d 82 (252)
T cd00845 77 GNHEFD 82 (252)
T ss_pred cccccc
Confidence 999963
No 88
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=95.88 E-value=0.023 Score=48.86 Aligned_cols=44 Identities=23% Similarity=0.323 Sum_probs=30.1
Q ss_pred CCCceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhh
Q psy5889 83 PPTSTYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESAN 130 (326)
Q Consensus 83 ~~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~ 130 (326)
.|++.+.+|||+.-.--...+....+- +.|+++++++||||---
T Consensus 44 ~p~D~lwhLGDl~~~~n~~~~a~~Ile----rLnGrkhlv~GNhDk~~ 87 (186)
T COG4186 44 GPDDVLWHLGDLSSGANRERAAGLILE----RLNGRKHLVPGNHDKCH 87 (186)
T ss_pred CccceEEEecccccccchhhHHHHHHH----HcCCcEEEeeCCCCCCc
Confidence 467889999999864443333333332 34688999999999743
No 89
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=95.88 E-value=0.017 Score=56.71 Aligned_cols=74 Identities=20% Similarity=0.215 Sum_probs=52.1
Q ss_pred CCeeEEecCCCC-------------HHHHHHhHHcCCCCCCceEEEeccccCCCCCcHHHHHHHHHhhhcC---CCcEEE
Q psy5889 58 TPLKICGDIHGQ-------------YNDLLGLFSYGKPPPTSTYLFLGDYVDRGKHSIETICLLFAYKIRY---PDNIYL 121 (326)
Q Consensus 58 ~~i~viGDIHG~-------------~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~---p~~v~l 121 (326)
+|++.++|.|=- +++|..+++.+.-...+-+|.-||+.|++.-|.+++.++...-.+. .-.|++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 477888898843 3445555555554555789999999999988888776655432221 236999
Q ss_pred ECCCchhhhh
Q psy5889 122 LRGNHESANI 131 (326)
Q Consensus 122 lrGNHE~~~~ 131 (326)
|.||||....
T Consensus 81 I~GNHD~~~~ 90 (390)
T COG0420 81 IAGNHDSPSR 90 (390)
T ss_pred ecCCCCchhc
Confidence 9999998754
No 90
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=95.49 E-value=0.022 Score=50.88 Aligned_cols=65 Identities=20% Similarity=0.175 Sum_probs=40.4
Q ss_pred cCCCCHHHHHHhHHcCCC-CCCceEEEeccccCCCCCcHH-HHHHHHHhhhcC---------------------CCcEEE
Q psy5889 65 DIHGQYNDLLGLFSYGKP-PPTSTYLFLGDYVDRGKHSIE-TICLLFAYKIRY---------------------PDNIYL 121 (326)
Q Consensus 65 DIHG~~~~L~~il~~~g~-~~~~~~vfLGD~VDRG~~s~e-vl~lL~~lk~~~---------------------p~~v~l 121 (326)
|++|+=.=|.++++.+.. -..+.++||||++|.|--+-+ --.....++..+ ...+++
T Consensus 24 d~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~ 103 (193)
T cd08164 24 DLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLIN 103 (193)
T ss_pred hhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEE
Confidence 556665666777665533 345778999999998753322 223333332222 145689
Q ss_pred ECCCchhh
Q psy5889 122 LRGNHESA 129 (326)
Q Consensus 122 lrGNHE~~ 129 (326)
|+||||.-
T Consensus 104 V~GNHDIG 111 (193)
T cd08164 104 IAGNHDVG 111 (193)
T ss_pred ECCcccCC
Confidence 99999983
No 91
>PLN02533 probable purple acid phosphatase
Probab=95.31 E-value=0.019 Score=57.30 Aligned_cols=71 Identities=13% Similarity=0.078 Sum_probs=40.0
Q ss_pred cCCeeEEecCCCCHHHHHHhHHcCCCCCCceEEEeccccCCCCCcH--H-HHHHHHHhhhcCCCcEEEECCCchhhh
Q psy5889 57 TTPLKICGDIHGQYNDLLGLFSYGKPPPTSTYLFLGDYVDRGKHSI--E-TICLLFAYKIRYPDNIYLLRGNHESAN 130 (326)
Q Consensus 57 ~~~i~viGDIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~--e-vl~lL~~lk~~~p~~v~llrGNHE~~~ 130 (326)
.-+++++||+|-. ......++.+.....+-+|++||+++-+...- + -..++..+... -.++.+.||||...
T Consensus 139 ~~~f~v~GDlG~~-~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~--~P~m~~~GNHE~~~ 212 (427)
T PLN02533 139 PIKFAVSGDLGTS-EWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQ--RPWMVTHGNHELEK 212 (427)
T ss_pred CeEEEEEEeCCCC-cccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhc--CceEEeCccccccc
Confidence 3468999999632 11122333332334567889999997654321 1 12222222222 34889999999863
No 92
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=95.09 E-value=0.59 Score=46.97 Aligned_cols=205 Identities=18% Similarity=0.172 Sum_probs=106.5
Q ss_pred CeeEEecCCC-CHHHHH-------HhHHcCC-CCCCceEE-EeccccCC-CC-----------CcHHHHHHHHHhhhcCC
Q psy5889 59 PLKICGDIHG-QYNDLL-------GLFSYGK-PPPTSTYL-FLGDYVDR-GK-----------HSIETICLLFAYKIRYP 116 (326)
Q Consensus 59 ~i~viGDIHG-~~~~L~-------~il~~~g-~~~~~~~v-fLGD~VDR-G~-----------~s~evl~lL~~lk~~~p 116 (326)
.+++++|+|= ...-+. ++|.-.+ ..+..+|+ .-||.||. |- +..|-.+.+..+-.+-|
T Consensus 227 ~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~vp 306 (481)
T COG1311 227 YVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQVP 306 (481)
T ss_pred EEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhCC
Confidence 4789999995 333333 2332221 22334554 57899993 22 12223334444333445
Q ss_pred Cc--EEEECCCchhhhhhhhh-CchHHHHHHhhHHHHHHHHhhhccCceEEEEcC-eEEEecCCCCCCCCCccccccCCC
Q psy5889 117 DN--IYLLRGNHESANINKIY-GFYEECKRRYDIKLWKKFTDCFNCMPVAAVVDH-KIFCCHGGLSPQLTSFSQITNLPR 192 (326)
Q Consensus 117 ~~--v~llrGNHE~~~~~~~~-gf~~e~~~~~~~~~~~~~~~~f~~LP~~~~i~~-~il~vHgGi~p~~~~l~~i~~i~r 192 (326)
.+ |++.+||||..-....- .+..... .++...+-.|-.=|....+++ .++..|| .+++++.+.-.
T Consensus 307 ~~I~v~i~PGnhDa~r~a~PQp~~~~~~k-----slf~~~n~~~v~NP~~~~l~G~~vL~~hG------~sidDii~~vP 375 (481)
T COG1311 307 EHIKVFIMPGNHDAVRQALPQPHFPELIK-----SLFSLNNLLFVSNPALVSLHGVDVLIYHG------RSIDDIIKLVP 375 (481)
T ss_pred CCceEEEecCCCCccccccCCCCcchhhc-----ccccccceEecCCCcEEEECCEEEEEecC------CCHHHHHhhCC
Confidence 44 68999999986553221 2222221 222222222333355555555 6888998 46666554432
Q ss_pred CCCCCC--C------------CcccceecCCCCCccCCcccCCCCCccccChHHHHHHHHhcCCceEEEeccccccCeEE
Q psy5889 193 PTEVPE--E------------GLLVDLLWSDPEENISGWGHNDRGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEF 258 (326)
Q Consensus 193 p~~~~~--~------------~~~~dllWsdP~~~~~~~~~~~rg~g~~Fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~ 258 (326)
.....+ . ....+-+|.-|.. ..-+ +++ ---+.++.||++. .|+..
T Consensus 376 ~~~~~~~~~ame~lLk~rHlaPtygg~~p~aP~~-kD~l--------------VIe-----evPDv~~~Ghvh~-~g~~~ 434 (481)
T COG1311 376 GADYDSPLKAMEELLKRRHLAPTYGGTLPIAPET-KDYL--------------VIE-----EVPDVFHTGHVHK-FGTGV 434 (481)
T ss_pred CCCccchHHHHHHHHHhcccCCCCCCccccccCC-cCce--------------eec-----cCCcEEEEccccc-cceeE
Confidence 221111 1 1122334444432 1000 111 1346789999998 69988
Q ss_pred EcCceEEEEEccCCCCCCCCCeEEEEEEcCC-CceEEEEEec
Q psy5889 259 FADKKLVTLFSAPNYCGEFDNAGAMMIVDEN-LTCSFHIMKP 299 (326)
Q Consensus 259 ~~~~~~iTvfSa~~y~~~~~N~gavl~i~~~-~~~~~~~~~~ 299 (326)
..+.+++..+|-+.+.. .+-++-|+.. +.+.+..+.+
T Consensus 435 y~gv~~vns~T~q~qTe----fqk~vni~p~~~~v~vv~~~~ 472 (481)
T COG1311 435 YEGVNLVNSGTWQEQTE----FQKMVNINPTPGNVPVVDFDS 472 (481)
T ss_pred EeccceEEeeeecchhc----cceEEEecCcccceeEEeccc
Confidence 88888888888887643 3555556554 4444444444
No 93
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=95.00 E-value=0.21 Score=46.88 Aligned_cols=61 Identities=25% Similarity=0.289 Sum_probs=36.3
Q ss_pred HHHHHhHHcCCC--CCCceEEEeccccCCCCCcH--H------HHHHHHHhhhcCC-CcEEEECCCchhhhh
Q psy5889 71 NDLLGLFSYGKP--PPTSTYLFLGDYVDRGKHSI--E------TICLLFAYKIRYP-DNIYLLRGNHESANI 131 (326)
Q Consensus 71 ~~L~~il~~~g~--~~~~~~vfLGD~VDRG~~s~--e------vl~lL~~lk~~~p-~~v~llrGNHE~~~~ 131 (326)
..+..+++.+.. ++.+-+|+.||+++.+.... + .-.+...++..+| -.|+.+.||||....
T Consensus 53 ~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~ 124 (296)
T cd00842 53 RLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPV 124 (296)
T ss_pred HHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCcc
Confidence 344455544422 35677899999998876431 1 1122222333333 369999999998644
No 94
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=94.98 E-value=0.028 Score=52.52 Aligned_cols=65 Identities=22% Similarity=0.219 Sum_probs=38.6
Q ss_pred CeeEEecCCCCH----------------HHHHHhHHcCCCCCCceEE-EeccccCCCCCc-----------HHHHHHHHH
Q psy5889 59 PLKICGDIHGQY----------------NDLLGLFSYGKPPPTSTYL-FLGDYVDRGKHS-----------IETICLLFA 110 (326)
Q Consensus 59 ~i~viGDIHG~~----------------~~L~~il~~~g~~~~~~~v-fLGD~VDRG~~s-----------~evl~lL~~ 110 (326)
+|+.++|+||.+ ..+..+++.......+.++ ..||+++..+.+ ..++..+..
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 477899999986 3345555544332223333 379999876522 234555554
Q ss_pred hhhcCCCcEEEECCCchh
Q psy5889 111 YKIRYPDNIYLLRGNHES 128 (326)
Q Consensus 111 lk~~~p~~v~llrGNHE~ 128 (326)
+. + . ++..||||.
T Consensus 82 ~g---~-d-~~~lGNHe~ 94 (277)
T cd07410 82 LG---Y-D-AGTLGNHEF 94 (277)
T ss_pred cC---C-C-EEeecccCc
Confidence 43 2 2 455699996
No 95
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=94.63 E-value=0.96 Score=42.21 Aligned_cols=50 Identities=18% Similarity=0.299 Sum_probs=31.4
Q ss_pred CceEEEeccccccCeEEEc--CceEEEEEccCCCCCCCCCeEEEEEEcC-CCceEEEE
Q psy5889 242 IDLVCRAHQVVEEGYEFFA--DKKLVTLFSAPNYCGEFDNAGAMMIVDE-NLTCSFHI 296 (326)
Q Consensus 242 l~~iIRgH~~~~~G~~~~~--~~~~iTvfSa~~y~~~~~N~gavl~i~~-~~~~~~~~ 296 (326)
-+.++.|||+. -|.+... +++-+.+.|.|.|.. .|.++.+|= +++++.+.
T Consensus 204 PhVyf~Gnq~~-f~t~~~~~~~~~~v~lv~vP~Fs~----t~~~vlvdl~tLe~~~v~ 256 (257)
T cd07387 204 PHVYFAGNQPK-FGTKLVEGEEGQRVLLVCVPSFSK----TGTAVLVNLRTLECEPIS 256 (257)
T ss_pred CCEEEeCCCcc-eeeeEEEcCCCCeEEEEEeCCcCc----CCEEEEEECCcCcEEEEe
Confidence 35578999986 4555543 366788888898854 355555543 46665544
No 96
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=94.58 E-value=0.094 Score=48.14 Aligned_cols=101 Identities=19% Similarity=0.253 Sum_probs=59.0
Q ss_pred ecCCeeEEecCCCCHHHHH----------------HhHH-cCCCCCCceEEEeccccCCCCC-----cHHHHHHHHHhhh
Q psy5889 56 LTTPLKICGDIHGQYNDLL----------------GLFS-YGKPPPTSTYLFLGDYVDRGKH-----SIETICLLFAYKI 113 (326)
Q Consensus 56 i~~~i~viGDIHG~~~~L~----------------~il~-~~g~~~~~~~vfLGD~VDRG~~-----s~evl~lL~~lk~ 113 (326)
...+..||.|+|=-+..-. +.+. ....-..+++|.+||+-.-.+. ..++-.++-.++.
T Consensus 18 ~~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~ 97 (235)
T COG1407 18 PLGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDE 97 (235)
T ss_pred ccCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhcc
Confidence 4578999999996444322 2222 1122234789999999864443 2444444444433
Q ss_pred cCCCcEEEECCCchhhhhhhhhCchHHHHHHhhHHHHHHHHhhhccCceEEEEcCeEEEecCCCCC
Q psy5889 114 RYPDNIYLLRGNHESANINKIYGFYEECKRRYDIKLWKKFTDCFNCMPVAAVVDHKIFCCHGGLSP 179 (326)
Q Consensus 114 ~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP~~~~i~~~il~vHgGi~p 179 (326)
. .+.+++||||...-.-..++. .+. ++... + ++++++||=-.|
T Consensus 98 ~---evi~i~GNHD~~i~~~~~~~~---------------v~v---~~~~~-i-~~~~~~HGh~~~ 140 (235)
T COG1407 98 R---EVIIIRGNHDNGIEEILPGFN---------------VEV---VDELE-I-GGLLFRHGHKEP 140 (235)
T ss_pred C---cEEEEeccCCCccccccccCC---------------cee---eeeEE-e-cCEEEEeCCCCC
Confidence 2 599999999986544333331 111 23332 3 569999995433
No 97
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=94.51 E-value=0.07 Score=49.46 Aligned_cols=70 Identities=23% Similarity=0.257 Sum_probs=40.0
Q ss_pred CeeEEecCCCC--H--HHHHHhHH-cCCCCCCceEEEecccc-CCCCCcH------HHHHHHHHhhhcCCCcEEEECCCc
Q psy5889 59 PLKICGDIHGQ--Y--NDLLGLFS-YGKPPPTSTYLFLGDYV-DRGKHSI------ETICLLFAYKIRYPDNIYLLRGNH 126 (326)
Q Consensus 59 ~i~viGDIHG~--~--~~L~~il~-~~g~~~~~~~vfLGD~V-DRG~~s~------evl~lL~~lk~~~p~~v~llrGNH 126 (326)
+++++||.=.. . .++.+.+. .+...+.+-+|++||++ +-|..+. +.+..++.. ....-.++.+.|||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~-~~~~~P~~~v~GNH 80 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSA-PSLQVPWYLVLGNH 80 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccc-hhhcCCeEEecCCc
Confidence 57899998663 1 23333332 23224456799999997 5554221 223323221 11234699999999
Q ss_pred hhh
Q psy5889 127 ESA 129 (326)
Q Consensus 127 E~~ 129 (326)
|..
T Consensus 81 D~~ 83 (277)
T cd07378 81 DYS 83 (277)
T ss_pred ccC
Confidence 986
No 98
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=94.26 E-value=0.11 Score=41.01 Aligned_cols=46 Identities=13% Similarity=0.267 Sum_probs=35.6
Q ss_pred CCCChhhHHHHHHHHHcCCCCCccccCCHHHHHHHHHHHHHHHHhCCCceee
Q psy5889 5 GAINQESLDNVIKKLSRGVRPGRMINLDQADIVIMIRAARDIFMAQPMFLYL 56 (326)
Q Consensus 5 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~i 56 (326)
+.|+.+.+.++++.+..+ + .|+...+..|+.++.++|+++|++++|
T Consensus 50 ~~it~efv~~mie~FK~~-K-----~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 50 EPITLEFVKAMIEWFKNQ-K-----KLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp TB--HHHHHHHHHHHHCT----------HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred CCCCHHHHHHHHHHHHhC-C-----CccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 457788899999999877 4 699999999999999999999999975
No 99
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=93.92 E-value=0.086 Score=48.80 Aligned_cols=65 Identities=22% Similarity=0.151 Sum_probs=40.6
Q ss_pred CeeEEecCCCCH----------HHHHHhHHcCCCCCCceEEEeccccCCCCCc-----HHHHHHHHHhhhcCCCcEEEEC
Q psy5889 59 PLKICGDIHGQY----------NDLLGLFSYGKPPPTSTYLFLGDYVDRGKHS-----IETICLLFAYKIRYPDNIYLLR 123 (326)
Q Consensus 59 ~i~viGDIHG~~----------~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s-----~evl~lL~~lk~~~p~~v~llr 123 (326)
+++-++|+||++ ..+..+++.....+.+-++..||+++..+.+ ..++..+-.+. -.+ +..
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g----~d~-~~~ 76 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAVG----YDA-VTP 76 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhcC----CcE-Ecc
Confidence 467899999974 4455566554333445567799999876643 23444444432 233 456
Q ss_pred CCchh
Q psy5889 124 GNHES 128 (326)
Q Consensus 124 GNHE~ 128 (326)
||||.
T Consensus 77 GNHef 81 (257)
T cd07408 77 GNHEF 81 (257)
T ss_pred ccccc
Confidence 99996
No 100
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=93.06 E-value=0.088 Score=49.69 Aligned_cols=66 Identities=26% Similarity=0.335 Sum_probs=42.0
Q ss_pred CeeEEecCCCCHH--------------HHHHhHHcCCC-CCCceEEEeccccCCCCC-c-----HHHHHHHHHhhhcCCC
Q psy5889 59 PLKICGDIHGQYN--------------DLLGLFSYGKP-PPTSTYLFLGDYVDRGKH-S-----IETICLLFAYKIRYPD 117 (326)
Q Consensus 59 ~i~viGDIHG~~~--------------~L~~il~~~g~-~~~~~~vfLGD~VDRG~~-s-----~evl~lL~~lk~~~p~ 117 (326)
+|+.+.|+||++. .+..+++.... .+..-++..||+++..+. + ..++..+.++..
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~---- 77 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGV---- 77 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCC----
Confidence 4778999999854 35555555433 233456779999987664 2 245666655543
Q ss_pred cEEEECCCchhh
Q psy5889 118 NIYLLRGNHESA 129 (326)
Q Consensus 118 ~v~llrGNHE~~ 129 (326)
. .+..||||.-
T Consensus 78 D-a~t~GNHefd 88 (288)
T cd07412 78 D-ASAVGNHEFD 88 (288)
T ss_pred e-eeeecccccc
Confidence 2 3566999963
No 101
>KOG0918|consensus
Probab=91.93 E-value=0.018 Score=56.14 Aligned_cols=192 Identities=12% Similarity=-0.079 Sum_probs=118.0
Q ss_pred ceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhhhhhCchHHHHHHh----hHHHHHHHHhhhccCc
Q psy5889 86 STYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANINKIYGFYEECKRRY----DIKLWKKFTDCFNCMP 161 (326)
Q Consensus 86 ~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~----~~~~~~~~~~~f~~LP 161 (326)
-..|+++++++++.+.++.+.+-+..+..+-.+.-..++||+.. ++++.++.-.- ...+++..++-++..+
T Consensus 49 latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~-----~~~R~~LVlp~l~S~riyvid~~~ep~~~~l 123 (476)
T KOG0918|consen 49 LATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDS-----SFKRRYLVLPSLNSGRIYVIDVKTEPRKPSL 123 (476)
T ss_pred eeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCc-----chhhhheeecccccCceEEEEeccCcCccce
Confidence 45799999999999999999998888888888888999999543 23322221111 2345667778888888
Q ss_pred eEEEEcCeEEEecCCCCCCCCCccccccCCCCC----CCCCCCcccceecCCCCCccCCcccCCCCCccccChH--HHHH
Q psy5889 162 VAAVVDHKIFCCHGGLSPQLTSFSQITNLPRPT----EVPEEGLLVDLLWSDPEENISGWGHNDRGVSYTFGAD--MVHE 235 (326)
Q Consensus 162 ~~~~i~~~il~vHgGi~p~~~~l~~i~~i~rp~----~~~~~~~~~dllWsdP~~~~~~~~~~~rg~g~~Fg~~--~~~~ 235 (326)
...+.+ ++++.||+..|.......+..+.-.. +-...+ -..++=++-.. ...|... +....||.+ ..-+
T Consensus 124 ~k~i~~-~il~~~~l~~Pht~hcla~g~v~vs~lGd~~gn~kg-~f~llD~~~~~-k~tw~~~--~~~p~~gyDfwyqpr 198 (476)
T KOG0918|consen 124 EKTIDP-DILEKTGLACPHTSHCLASGNVMVSCLGDAEGNAKG-GFLLLDSDFNE-KGTWEKP--GHSPLFGYDFWYQPR 198 (476)
T ss_pred eeeech-hhHhhcCCcCCcccccccCCCeeEEeecccccCCcC-CeEEecCccce-ecccccC--CCccccccceeeccc
Confidence 887765 89999999999775444333221100 000111 12222222211 2233321 122222222 2334
Q ss_pred HHHhcCCceEEEeccccccCeEEEcCceEEEEEccCCCCCCCCCeEEEEEEcCC
Q psy5889 236 FLKKFNIDLVCRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMIVDEN 289 (326)
Q Consensus 236 fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa~~y~~~~~N~gavl~i~~~ 289 (326)
+....+.+...+.|.....+...+.++ ++.++.+-|.-...+.++.+.+..+
T Consensus 199 ~~~mIstewgap~~~~~gf~~~~v~d~--lyg~~lhvy~w~~~~~~QtidL~~~ 250 (476)
T KOG0918|consen 199 HNVMISTEWGAPNALRKGFNPADVEDG--LYGSHLHVYQWSPGELKQTIDLGDT 250 (476)
T ss_pred cceEEeecccCchhhhcCCChhHhhcc--ceeeeeEEEecCCccceeEEecCCC
Confidence 555566777778887654444444554 7888888887777888999998876
No 102
>KOG2863|consensus
Probab=91.82 E-value=0.42 Score=46.38 Aligned_cols=74 Identities=23% Similarity=0.352 Sum_probs=48.9
Q ss_pred CCeeEEecCCCCHHHHH---HhHHcCCCCCCceEEEeccccC-CCCC---cHHH-------HHHHH--HhhhcCCCcEEE
Q psy5889 58 TPLKICGDIHGQYNDLL---GLFSYGKPPPTSTYLFLGDYVD-RGKH---SIET-------ICLLF--AYKIRYPDNIYL 121 (326)
Q Consensus 58 ~~i~viGDIHG~~~~L~---~il~~~g~~~~~~~vfLGD~VD-RG~~---s~ev-------l~lL~--~lk~~~p~~v~l 121 (326)
+||.|=|=-||.++.+- ...++.|-.+.+.++++||+=. |... ++.| =.+.. .=.+..|=--.+
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 57899999999999987 4556666678889999999963 2221 2111 11111 113345655678
Q ss_pred ECCCchhhhh
Q psy5889 122 LRGNHESANI 131 (326)
Q Consensus 122 lrGNHE~~~~ 131 (326)
|-||||.++.
T Consensus 81 IGGNHEAsny 90 (456)
T KOG2863|consen 81 IGGNHEASNY 90 (456)
T ss_pred ecCchHHHHH
Confidence 9999999754
No 103
>KOG3662|consensus
Probab=91.68 E-value=0.27 Score=48.63 Aligned_cols=56 Identities=23% Similarity=0.332 Sum_probs=36.6
Q ss_pred HHHhHHcCCCC-CCceEEEeccccCCCCCc--HHHHHHHHHhhhcCCC----cEEEECCCchh
Q psy5889 73 LLGLFSYGKPP-PTSTYLFLGDYVDRGKHS--IETICLLFAYKIRYPD----NIYLLRGNHES 128 (326)
Q Consensus 73 L~~il~~~g~~-~~~~~vfLGD~VDRG~~s--~evl~lL~~lk~~~p~----~v~llrGNHE~ 128 (326)
|.+.+....+. ..+-++||||++|-|... -|--.....++..++. .+..+.||||-
T Consensus 81 lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 81 LRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDI 143 (410)
T ss_pred HHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCcccc
Confidence 33444443333 346688899999988753 4444555555555554 68899999997
No 104
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=91.42 E-value=0.38 Score=42.47 Aligned_cols=44 Identities=27% Similarity=0.401 Sum_probs=31.4
Q ss_pred CCceEEEecccc--CCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhh
Q psy5889 84 PTSTYLFLGDYV--DRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANI 131 (326)
Q Consensus 84 ~~~~~vfLGD~V--DRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~ 131 (326)
+++.++.-||+- -|=++..+=+.+|-+ .|+.=+++|||||.+.-
T Consensus 43 ~eDiVllpGDiSWaM~l~ea~~Dl~~i~~----LPG~K~m~rGNHDYWw~ 88 (230)
T COG1768 43 PEDIVLLPGDISWAMRLEEAEEDLRFIGD----LPGTKYMIRGNHDYWWS 88 (230)
T ss_pred hhhEEEecccchhheechhhhhhhhhhhc----CCCcEEEEecCCccccc
Confidence 456677789986 345555566666654 47888999999999754
No 105
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=91.23 E-value=0.32 Score=45.15 Aligned_cols=65 Identities=22% Similarity=0.176 Sum_probs=36.8
Q ss_pred CeeEEecCCCCHHH----------------------HHHhHHcCCCC-CCce-EEEeccccCCCCCc-----HHHHHHHH
Q psy5889 59 PLKICGDIHGQYND----------------------LLGLFSYGKPP-PTST-YLFLGDYVDRGKHS-----IETICLLF 109 (326)
Q Consensus 59 ~i~viGDIHG~~~~----------------------L~~il~~~g~~-~~~~-~vfLGD~VDRG~~s-----~evl~lL~ 109 (326)
.++.++|+||++.. +..+++..... ..+. ++..||+++..+.+ ..++..+.
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~ 81 (264)
T cd07411 2 TLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALN 81 (264)
T ss_pred EEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHH
Confidence 35678899997533 34444443222 2333 45699999877643 24444444
Q ss_pred HhhhcCCCcEEEECCCchhh
Q psy5889 110 AYKIRYPDNIYLLRGNHESA 129 (326)
Q Consensus 110 ~lk~~~p~~v~llrGNHE~~ 129 (326)
.+. -. .+. ||||..
T Consensus 82 ~~g----~d-a~~-GNHefd 95 (264)
T cd07411 82 ALG----VD-AMV-GHWEFT 95 (264)
T ss_pred hhC----Ce-EEe-cccccc
Confidence 432 22 344 999963
No 106
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=89.46 E-value=0.38 Score=54.03 Aligned_cols=66 Identities=18% Similarity=0.119 Sum_probs=41.3
Q ss_pred CCeeEEecCCCCH---HHHHHhHHcCCCCCCceE-EEeccccCCCCCc-----HHHHHHHHHhhhcCCCcEEEECCCchh
Q psy5889 58 TPLKICGDIHGQY---NDLLGLFSYGKPPPTSTY-LFLGDYVDRGKHS-----IETICLLFAYKIRYPDNIYLLRGNHES 128 (326)
Q Consensus 58 ~~i~viGDIHG~~---~~L~~il~~~g~~~~~~~-vfLGD~VDRG~~s-----~evl~lL~~lk~~~p~~v~llrGNHE~ 128 (326)
-+|+.++|+||.+ ..+..+++.......+.+ +..||+++..+.+ ..++.++..+.. -....||||.
T Consensus 661 l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg~-----d~~~~GNHEf 735 (1163)
T PRK09419 661 LTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMGY-----DASTFGNHEF 735 (1163)
T ss_pred EEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcCC-----CEEEeccccc
Confidence 3588999999975 444444544322222334 4489999987644 345665555432 2569999997
No 107
>KOG2476|consensus
Probab=89.27 E-value=0.75 Score=45.95 Aligned_cols=69 Identities=17% Similarity=0.387 Sum_probs=54.3
Q ss_pred cCCeeEEecCCCCHHHHHHhHHcCCC--CCCceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCc
Q psy5889 57 TTPLKICGDIHGQYNDLLGLFSYGKP--PPTSTYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNH 126 (326)
Q Consensus 57 ~~~i~viGDIHG~~~~L~~il~~~g~--~~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNH 126 (326)
+++|.||||.-|+++.|.+-.+.... .|-+-++++|++.+--.++.|++.+...- ...|-.++++-+|-
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~-~~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGT-KKVPIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCC-ccCceeEEEecCCC
Confidence 47999999999999999876665433 24578999999999877888988877654 35677788887775
No 108
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=89.02 E-value=0.72 Score=43.29 Aligned_cols=66 Identities=17% Similarity=0.195 Sum_probs=38.0
Q ss_pred CeeEEecCCCCH---------------------HHHHHhHHcCCCC-CCceEEEeccccCCCCC-----cHHHHHHHHHh
Q psy5889 59 PLKICGDIHGQY---------------------NDLLGLFSYGKPP-PTSTYLFLGDYVDRGKH-----SIETICLLFAY 111 (326)
Q Consensus 59 ~i~viGDIHG~~---------------------~~L~~il~~~g~~-~~~~~vfLGD~VDRG~~-----s~evl~lL~~l 111 (326)
+++-++|+||++ ..+..+++..... +..-++..||+++..+. ...++..+-.+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~ 81 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL 81 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc
Confidence 467789999875 3344455443322 23335558999987653 23344444444
Q ss_pred hhcCCCcEEEECCCchhh
Q psy5889 112 KIRYPDNIYLLRGNHESA 129 (326)
Q Consensus 112 k~~~p~~v~llrGNHE~~ 129 (326)
.. .+ +..||||.-
T Consensus 82 g~----D~-~~lGNHefd 94 (281)
T cd07409 82 GY----DA-MTLGNHEFD 94 (281)
T ss_pred CC----CE-EEecccccc
Confidence 32 23 445999973
No 109
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=87.62 E-value=0.88 Score=42.09 Aligned_cols=64 Identities=22% Similarity=0.214 Sum_probs=40.1
Q ss_pred eeEEecCC----------CCHHHHHHhHHcCCCC-CCceEEEeccccCCCCC-----cHHHHHHHHHhhhcCCCcEEEEC
Q psy5889 60 LKICGDIH----------GQYNDLLGLFSYGKPP-PTSTYLFLGDYVDRGKH-----SIETICLLFAYKIRYPDNIYLLR 123 (326)
Q Consensus 60 i~viGDIH----------G~~~~L~~il~~~g~~-~~~~~vfLGD~VDRG~~-----s~evl~lL~~lk~~~p~~v~llr 123 (326)
++-+.|+| |-+..+..++++.... +..-++..||+++.++. ...++..+..+.. -+...
T Consensus 3 il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~~-----d~~~~ 77 (257)
T cd07406 3 ILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALGV-----DLACF 77 (257)
T ss_pred EEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcCC-----cEEee
Confidence 44556666 3466677777665433 33356679999987753 2456666655532 35678
Q ss_pred CCchh
Q psy5889 124 GNHES 128 (326)
Q Consensus 124 GNHE~ 128 (326)
||||.
T Consensus 78 GNHef 82 (257)
T cd07406 78 GNHEF 82 (257)
T ss_pred ccccc
Confidence 99996
No 110
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=86.81 E-value=1.2 Score=39.54 Aligned_cols=72 Identities=14% Similarity=0.213 Sum_probs=40.7
Q ss_pred eeEEecCCCC-----HHHHHHhHHcCC-CCCCceEEEeccccCCCCCcH-------------HHHHHHHHhh--hcCCCc
Q psy5889 60 LKICGDIHGQ-----YNDLLGLFSYGK-PPPTSTYLFLGDYVDRGKHSI-------------ETICLLFAYK--IRYPDN 118 (326)
Q Consensus 60 i~viGDIHG~-----~~~L~~il~~~g-~~~~~~~vfLGD~VDRG~~s~-------------evl~lL~~lk--~~~p~~ 118 (326)
|++++|+|=. ++.|.++|+... ....+.+|++|+++|.-.... +-+..+.... +..--+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5677787764 677888888777 555678999999999632211 1111111111 112257
Q ss_pred EEEECCCchhhhh
Q psy5889 119 IYLLRGNHESANI 131 (326)
Q Consensus 119 v~llrGNHE~~~~ 131 (326)
|++++|+||-...
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999997655
No 111
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=83.70 E-value=1.1 Score=42.26 Aligned_cols=66 Identities=18% Similarity=0.079 Sum_probs=38.4
Q ss_pred CeeEEecCCCCHH----------------HHHHhHHc-CCC-CCCceEEEeccccCCCCCc-------HHHHHHHHHhhh
Q psy5889 59 PLKICGDIHGQYN----------------DLLGLFSY-GKP-PPTSTYLFLGDYVDRGKHS-------IETICLLFAYKI 113 (326)
Q Consensus 59 ~i~viGDIHG~~~----------------~L~~il~~-~g~-~~~~~~vfLGD~VDRG~~s-------~evl~lL~~lk~ 113 (326)
.|+-..|+||++. .+.+.++. ... .+..-++..||.++.-+.+ .-++.++-.+..
T Consensus 7 tILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~mgy 86 (282)
T cd07407 7 NFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMMPY 86 (282)
T ss_pred EEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhcCC
Confidence 5788999999763 22222221 111 2233455689999865432 234555555542
Q ss_pred cCCCcEEEECCCchhh
Q psy5889 114 RYPDNIYLLRGNHESA 129 (326)
Q Consensus 114 ~~p~~v~llrGNHE~~ 129 (326)
=.+..||||.-
T Consensus 87 -----Da~tlGNHEFd 97 (282)
T cd07407 87 -----DLLTIGNHELY 97 (282)
T ss_pred -----cEEeecccccC
Confidence 35889999994
No 112
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=83.32 E-value=1.1 Score=45.68 Aligned_cols=69 Identities=23% Similarity=0.257 Sum_probs=43.7
Q ss_pred ecCCeeEEecCCCCHH------------HHH---HhHHcCCCCC-CceEEEeccccCCCC------CcHHHHHHHHHhhh
Q psy5889 56 LTTPLKICGDIHGQYN------------DLL---GLFSYGKPPP-TSTYLFLGDYVDRGK------HSIETICLLFAYKI 113 (326)
Q Consensus 56 i~~~i~viGDIHG~~~------------~L~---~il~~~g~~~-~~~~vfLGD~VDRG~------~s~evl~lL~~lk~ 113 (326)
.+-+|+-..|+||.+. -+. .+++...... +..+|=.||+++..+ .....+.+|-.++.
T Consensus 25 ~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~y 104 (517)
T COG0737 25 VKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALGY 104 (517)
T ss_pred eeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcCC
Confidence 3447889999999998 222 2333222222 233444899999844 34456777777664
Q ss_pred cCCCcEEEECCCchhh
Q psy5889 114 RYPDNIYLLRGNHESA 129 (326)
Q Consensus 114 ~~p~~v~llrGNHE~~ 129 (326)
. .+..||||.-
T Consensus 105 D-----a~tiGNHEFd 115 (517)
T COG0737 105 D-----AMTLGNHEFD 115 (517)
T ss_pred c-----EEeecccccc
Confidence 3 5888999984
No 113
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=82.96 E-value=2.2 Score=40.04 Aligned_cols=67 Identities=16% Similarity=0.171 Sum_probs=47.4
Q ss_pred CCeeEEecCCCC--HHHHHHhHHcCCCCC-CceEEEeccccCCC-CCcHHHHHHHHHhhhcCCCcEEEECCCchhh
Q psy5889 58 TPLKICGDIHGQ--YNDLLGLFSYGKPPP-TSTYLFLGDYVDRG-KHSIETICLLFAYKIRYPDNIYLLRGNHESA 129 (326)
Q Consensus 58 ~~i~viGDIHG~--~~~L~~il~~~g~~~-~~~~vfLGD~VDRG-~~s~evl~lL~~lk~~~p~~v~llrGNHE~~ 129 (326)
++|.++|||=|. ...+...|..+.... .+-+|..||....| --+.++...|..+.. .++.+ |||+.-
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~Gv----DviT~-GNH~~D 71 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSGV----NYITM-GNHTWF 71 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcCC----CEEEc-cchhcc
Confidence 579999999999 455666666554332 35566689999766 457888988887654 34444 999874
No 114
>KOG1378|consensus
Probab=82.61 E-value=4.4 Score=40.72 Aligned_cols=34 Identities=15% Similarity=0.222 Sum_probs=28.4
Q ss_pred HHHHHHHHhcCCceEEEeccccccCeEEEcCceE
Q psy5889 231 DMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKKL 264 (326)
Q Consensus 231 ~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~ 264 (326)
..++..+-++++++++-||...-+......|.++
T Consensus 322 ~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~ 355 (452)
T KOG1378|consen 322 EGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTC 355 (452)
T ss_pred HHHHHHHHHhceeEEEeccceehhccchhhccee
Confidence 3699999999999999999988777766666654
No 115
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=81.46 E-value=1.9 Score=41.29 Aligned_cols=64 Identities=23% Similarity=0.158 Sum_probs=39.8
Q ss_pred eeEEecCCCCHH------HHHHhHHcCCC-----CCCceEEEeccccCCCCC-------------cHHHHHHHHHhhhcC
Q psy5889 60 LKICGDIHGQYN------DLLGLFSYGKP-----PPTSTYLFLGDYVDRGKH-------------SIETICLLFAYKIRY 115 (326)
Q Consensus 60 i~viGDIHG~~~------~L~~il~~~g~-----~~~~~~vfLGD~VDRG~~-------------s~evl~lL~~lk~~~ 115 (326)
|+-..|+||++. .+..+++.... .+..-++..||.+.-++. ...++.++-++...
T Consensus 3 IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g~D- 81 (313)
T cd08162 3 LLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALGVQ- 81 (313)
T ss_pred EEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccCCc-
Confidence 567899999853 33333333211 234456669999875542 34556666666543
Q ss_pred CCcEEEECCCchh
Q psy5889 116 PDNIYLLRGNHES 128 (326)
Q Consensus 116 p~~v~llrGNHE~ 128 (326)
.+..||||.
T Consensus 82 ----a~tlGNHEF 90 (313)
T cd08162 82 ----AIALGNHEF 90 (313)
T ss_pred ----EEecccccc
Confidence 578999996
No 116
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=80.76 E-value=1.7 Score=40.89 Aligned_cols=66 Identities=17% Similarity=0.048 Sum_probs=36.5
Q ss_pred CeeEEecCCCCHHH----------HHHhHHcCCC-----CCCceEEEeccccCCCCC-----cHHHHHHHHHhhhcCCCc
Q psy5889 59 PLKICGDIHGQYND----------LLGLFSYGKP-----PPTSTYLFLGDYVDRGKH-----SIETICLLFAYKIRYPDN 118 (326)
Q Consensus 59 ~i~viGDIHG~~~~----------L~~il~~~g~-----~~~~~~vfLGD~VDRG~~-----s~evl~lL~~lk~~~p~~ 118 (326)
.|+.+.|+||++.. +..+++.... .+..-++-.||.+...+. ...++.++-.+.. .
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g~----D 77 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGY----D 77 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhCC----c
Confidence 36788999998533 3334433221 233445558999843332 2334455555542 2
Q ss_pred EEEECCCchhh
Q psy5889 119 IYLLRGNHESA 129 (326)
Q Consensus 119 v~llrGNHE~~ 129 (326)
+ ...||||.-
T Consensus 78 a-~~~GNHEfD 87 (285)
T cd07405 78 A-MAVGNHEFD 87 (285)
T ss_pred E-Eeecccccc
Confidence 3 455999963
No 117
>KOG3339|consensus
Probab=79.77 E-value=20 Score=31.98 Aligned_cols=85 Identities=20% Similarity=0.330 Sum_probs=63.5
Q ss_pred ceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhhhhhhCch----------------HHHHHHhhHHH
Q psy5889 86 STYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANINKIYGFY----------------EECKRRYDIKL 149 (326)
Q Consensus 86 ~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~~~~~gf~----------------~e~~~~~~~~~ 149 (326)
..+||+| .|-+.-|++.+|-.++.+|-.+.+ +.|+-|.|..++...|. .|..+.|-..+
T Consensus 40 ~~lVvlG----SGGHT~EMlrLl~~l~~~y~~r~y-I~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~ltSv 114 (211)
T KOG3339|consen 40 STLVVLG----SGGHTGEMLRLLEALQDLYSPRSY-IAADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSWLTSV 114 (211)
T ss_pred eEEEEEc----CCCcHHHHHHHHHHHHhhcCceEE-EEecCchhhHHHHHhhhccccccchhheecchhhhhhhhhhhhH
Confidence 4688998 488899999999999988876654 48999999887644433 12333344567
Q ss_pred HHHHHhhhccCceEEEEcCeEEEecC
Q psy5889 150 WKKFTDCFNCMPVAAVVDHKIFCCHG 175 (326)
Q Consensus 150 ~~~~~~~f~~LP~~~~i~~~il~vHg 175 (326)
|..+...+.++++...+-..++.+-|
T Consensus 115 ~Tti~all~s~~lv~RirPdlil~NG 140 (211)
T KOG3339|consen 115 FTTIWALLQSFVLVWRIRPDLILCNG 140 (211)
T ss_pred HHHHHHHHHHheEEEecCCCEEEECC
Confidence 77888888888999888767777776
No 118
>KOG1432|consensus
Probab=79.42 E-value=2.5 Score=40.89 Aligned_cols=47 Identities=17% Similarity=0.170 Sum_probs=30.8
Q ss_pred CCCceEEEeccccCCCCCc---HHHHHHHHHhhhcCCCcEEEECCCchhhh
Q psy5889 83 PPTSTYLFLGDYVDRGKHS---IETICLLFAYKIRYPDNIYLLRGNHESAN 130 (326)
Q Consensus 83 ~~~~~~vfLGD~VDRG~~s---~evl~lL~~lk~~~p~~v~llrGNHE~~~ 130 (326)
...+.+||+||.|+. ... ..+++-..+-.+.+.=....+.||||+..
T Consensus 99 E~PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~~IPwA~~lGNHDdes 148 (379)
T KOG1432|consen 99 EKPDLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDRKIPWAAVLGNHDDES 148 (379)
T ss_pred cCCCEEEEeCCcccc-cccHhHHHHHHHHhhhHhhcCCCeEEEeccccccc
Confidence 345789999999986 333 33444444434444445679999999864
No 119
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=76.81 E-value=2.9 Score=44.20 Aligned_cols=68 Identities=16% Similarity=0.105 Sum_probs=42.9
Q ss_pred ecCCeeEEecCCCCHHH----------------HHHhHHcCCC-CCCceEEEeccccCCCCCcH-------------HHH
Q psy5889 56 LTTPLKICGDIHGQYND----------------LLGLFSYGKP-PPTSTYLFLGDYVDRGKHSI-------------ETI 105 (326)
Q Consensus 56 i~~~i~viGDIHG~~~~----------------L~~il~~~g~-~~~~~~vfLGD~VDRG~~s~-------------evl 105 (326)
+.-+|+-..|+||++.. +..+++.... .++.-+|-.||.+...+.+- -++
T Consensus 24 ~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i 103 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVY 103 (649)
T ss_pred ceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHH
Confidence 45578899999998643 2233333321 13345666999998666431 256
Q ss_pred HHHHHhhhcCCCcEEEECCCchh
Q psy5889 106 CLLFAYKIRYPDNIYLLRGNHES 128 (326)
Q Consensus 106 ~lL~~lk~~~p~~v~llrGNHE~ 128 (326)
..+-.+.. -....||||.
T Consensus 104 ~amN~lgy-----Da~tlGNHEF 121 (649)
T PRK09420 104 KAMNTLDY-----DVGNLGNHEF 121 (649)
T ss_pred HHHHhcCC-----cEEeccchhh
Confidence 66666653 2588999996
No 120
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=76.14 E-value=2.8 Score=44.09 Aligned_cols=66 Identities=18% Similarity=0.112 Sum_probs=40.2
Q ss_pred CCeeEEecCCCCHHH----------------HHHhHHcCCCC-CCceEEEeccccCCCCCc-------------HHHHHH
Q psy5889 58 TPLKICGDIHGQYND----------------LLGLFSYGKPP-PTSTYLFLGDYVDRGKHS-------------IETICL 107 (326)
Q Consensus 58 ~~i~viGDIHG~~~~----------------L~~il~~~g~~-~~~~~vfLGD~VDRG~~s-------------~evl~l 107 (326)
-+|+-..|+||++.. +..+++..... ++.-+|-.||.+...+.+ .-++.+
T Consensus 3 l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~ 82 (626)
T TIGR01390 3 LRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKA 82 (626)
T ss_pred EEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHH
Confidence 367888999998653 23334333211 234456699999865533 235555
Q ss_pred HHHhhhcCCCcEEEECCCchh
Q psy5889 108 LFAYKIRYPDNIYLLRGNHES 128 (326)
Q Consensus 108 L~~lk~~~p~~v~llrGNHE~ 128 (326)
+-.|... ....||||.
T Consensus 83 mN~lgyD-----a~tlGNHEF 98 (626)
T TIGR01390 83 MNLLKYD-----VGNLGNHEF 98 (626)
T ss_pred HhhcCcc-----EEecccccc
Confidence 5555432 588999996
No 121
>KOG3947|consensus
Probab=75.87 E-value=6.2 Score=37.19 Aligned_cols=94 Identities=16% Similarity=0.136 Sum_probs=58.2
Q ss_pred cCCHHHHHHHHHHHHHHHHhCCCceee---------cCCeeEEecCCCCHHHHHHhHHcCCCCCCceEEEeccccCCCCC
Q psy5889 30 NLDQADIVIMIRAARDIFMAQPMFLYL---------TTPLKICGDIHGQYNDLLGLFSYGKPPPTSTYLFLGDYVDRGKH 100 (326)
Q Consensus 30 ~~~~~~~~~l~~~~~~il~~ep~~l~i---------~~~i~viGDIHG~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~ 100 (326)
.++.+...+-.+.++..=.-+|++-.+ ..+.+.|+|.|+...+.. ..++.|.++-+||+-.-|.
T Consensus 25 ~~ssnpt~a~~~~~~~q~~~kp~vkpi~~~ap~~~~~~r~VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g~- 97 (305)
T KOG3947|consen 25 EYSSNPTQAFTFYNKNQRRFKPPVKPIRLDAPVGPGYARFVCISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL- 97 (305)
T ss_pred CcCCChHHHHHHHHHhcCcccCCCCCcCCCCCCCCCceEEEEecCcccccCccc------cCCCCceEEeccCCccccC-
Confidence 355566555555555544455644333 236899999999665543 3566677788999987665
Q ss_pred cHHHHHHHHHhhhcCC-CcEEEECCCchhhhh
Q psy5889 101 SIETICLLFAYKIRYP-DNIYLLRGNHESANI 131 (326)
Q Consensus 101 s~evl~lL~~lk~~~p-~~v~llrGNHE~~~~ 131 (326)
+-||..+=-.+- ..| ..=+.|+||||.-.-
T Consensus 98 ~~ev~~fn~~~g-slph~yKIVIaGNHELtFd 128 (305)
T KOG3947|consen 98 PEEVIKFNEWLG-SLPHEYKIVIAGNHELTFD 128 (305)
T ss_pred HHHHHhhhHHhc-cCcceeeEEEeeccceeec
Confidence 556654433221 122 223689999998543
No 122
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=74.85 E-value=2.9 Score=47.08 Aligned_cols=66 Identities=21% Similarity=0.224 Sum_probs=39.0
Q ss_pred CCeeEEecCCCCHHH----------------HHHhHHcCCCC-CCceEEEeccccCCCCC--------------cHHHHH
Q psy5889 58 TPLKICGDIHGQYND----------------LLGLFSYGKPP-PTSTYLFLGDYVDRGKH--------------SIETIC 106 (326)
Q Consensus 58 ~~i~viGDIHG~~~~----------------L~~il~~~g~~-~~~~~vfLGD~VDRG~~--------------s~evl~ 106 (326)
-+|+-..|+||++.. +..+++..... +..-+|-.||.+...+- ...++.
T Consensus 42 l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i~ 121 (1163)
T PRK09419 42 IQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMIK 121 (1163)
T ss_pred EEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHHH
Confidence 468999999998643 23344433221 22334448999986652 123455
Q ss_pred HHHHhhhcCCCcEEEECCCchh
Q psy5889 107 LLFAYKIRYPDNIYLLRGNHES 128 (326)
Q Consensus 107 lL~~lk~~~p~~v~llrGNHE~ 128 (326)
.+-.+.. -....||||.
T Consensus 122 ~mN~lgy-----Da~~lGNHEF 138 (1163)
T PRK09419 122 AMNALGY-----DAGTLGNHEF 138 (1163)
T ss_pred HHhhcCc-----cEEeeccccc
Confidence 5554442 2577999997
No 123
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=72.63 E-value=2.2 Score=42.79 Aligned_cols=41 Identities=24% Similarity=0.389 Sum_probs=34.0
Q ss_pred ceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhh
Q psy5889 86 STYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANI 131 (326)
Q Consensus 86 ~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~ 131 (326)
+++=.+||+-||||++-.+++-|..+ ..+=+-.||||...+
T Consensus 192 DhLHiVGDIyDRGP~pd~Imd~L~~y-----hsvDiQWGNHDilWm 232 (648)
T COG3855 192 DHLHIVGDIYDRGPYPDKIMDTLINY-----HSVDIQWGNHDILWM 232 (648)
T ss_pred hheeeecccccCCCCchHHHHHHhhc-----ccccccccCcceEEe
Confidence 56778999999999999999988765 266688999997655
No 124
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=70.77 E-value=12 Score=35.57 Aligned_cols=72 Identities=15% Similarity=0.255 Sum_probs=47.7
Q ss_pred CCeeEEecCCC----CHHHHHHhHHcCC-CCC----CceEEEeccccCCC----CCc----HHHHHHHHHh-hhcCC---
Q psy5889 58 TPLKICGDIHG----QYNDLLGLFSYGK-PPP----TSTYLFLGDYVDRG----KHS----IETICLLFAY-KIRYP--- 116 (326)
Q Consensus 58 ~~i~viGDIHG----~~~~L~~il~~~g-~~~----~~~~vfLGD~VDRG----~~s----~evl~lL~~l-k~~~p--- 116 (326)
..++|+||+|= .++.|.++|+... ..+ ..-+||+|+++-+. ..+ .|-++-|..+ ...||
T Consensus 28 ~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L~ 107 (291)
T PTZ00235 28 HNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLIL 107 (291)
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHHH
Confidence 46899999995 6778888887662 212 34689999999763 222 2334444432 22344
Q ss_pred --CcEEEECCCchhh
Q psy5889 117 --DNIYLLRGNHESA 129 (326)
Q Consensus 117 --~~v~llrGNHE~~ 129 (326)
.++++++|-.|-+
T Consensus 108 ~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 108 EHCYLIFIPGINDPC 122 (291)
T ss_pred hcCeEEEECCCCCCC
Confidence 7899999999974
No 125
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=69.08 E-value=5.8 Score=43.02 Aligned_cols=67 Identities=19% Similarity=0.125 Sum_probs=41.1
Q ss_pred cCCeeEEecCCCCHHHH----------------HHhHHcCCC-CCCceEEEeccccCCCCCc--------------HHHH
Q psy5889 57 TTPLKICGDIHGQYNDL----------------LGLFSYGKP-PPTSTYLFLGDYVDRGKHS--------------IETI 105 (326)
Q Consensus 57 ~~~i~viGDIHG~~~~L----------------~~il~~~g~-~~~~~~vfLGD~VDRG~~s--------------~evl 105 (326)
+-+|+-..|+||++... ..+++.... .++.-+|-.||.+..-+.+ .-++
T Consensus 115 ~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i 194 (814)
T PRK11907 115 DVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMY 194 (814)
T ss_pred EEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHH
Confidence 34688899999986432 223332211 1334466699999765432 1366
Q ss_pred HHHHHhhhcCCCcEEEECCCchh
Q psy5889 106 CLLFAYKIRYPDNIYLLRGNHES 128 (326)
Q Consensus 106 ~lL~~lk~~~p~~v~llrGNHE~ 128 (326)
.++-.|... ....||||.
T Consensus 195 ~amN~LGyD-----A~tLGNHEF 212 (814)
T PRK11907 195 AALEALGFD-----AGTLGNHEF 212 (814)
T ss_pred HHHhccCCC-----EEEechhhc
Confidence 666666532 588999996
No 126
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=68.40 E-value=9.3 Score=35.56 Aligned_cols=66 Identities=17% Similarity=0.170 Sum_probs=43.3
Q ss_pred CeeEEecCCCCHHH--HHHhHHcCCCC-CCceEEEeccccCCC-CCcHHHHHHHHHhhhcCCCcEEEECCCchhh
Q psy5889 59 PLKICGDIHGQYND--LLGLFSYGKPP-PTSTYLFLGDYVDRG-KHSIETICLLFAYKIRYPDNIYLLRGNHESA 129 (326)
Q Consensus 59 ~i~viGDIHG~~~~--L~~il~~~g~~-~~~~~vfLGD~VDRG-~~s~evl~lL~~lk~~~p~~v~llrGNHE~~ 129 (326)
++.+||||=|.... +...+...... +.+-+|-.||..--| .-+.++...|..+... +..+ ||||.-
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~D----~iTl-GNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGVD----VITM-GNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCCC----EEEe-cccccC
Confidence 57899999997543 34444443222 234455589998766 3678888888877643 4344 999763
No 127
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=67.60 E-value=7.5 Score=38.56 Aligned_cols=72 Identities=7% Similarity=0.037 Sum_probs=41.1
Q ss_pred CCeeEEecCCC-CHHHH--HHhHHcC-CCCCCceEEEeccccCCCCCcH------HHHHHHHHhhh-cCCCcEEEECCCc
Q psy5889 58 TPLKICGDIHG-QYNDL--LGLFSYG-KPPPTSTYLFLGDYVDRGKHSI------ETICLLFAYKI-RYPDNIYLLRGNH 126 (326)
Q Consensus 58 ~~i~viGDIHG-~~~~L--~~il~~~-g~~~~~~~vfLGD~VDRG~~s~------evl~lL~~lk~-~~p~~v~llrGNH 126 (326)
-+++++||-=+ ..... -+.+... ...+.+-+|-+||-++.|..++ +.++-++.-.. ...-.++++.|||
T Consensus 27 l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLGNH 106 (394)
T PTZ00422 27 LRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLGQA 106 (394)
T ss_pred EEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCCcc
Confidence 36899999543 22221 1222222 2234466778999988887754 33444442211 0123689999999
Q ss_pred hhh
Q psy5889 127 ESA 129 (326)
Q Consensus 127 E~~ 129 (326)
|..
T Consensus 107 Dy~ 109 (394)
T PTZ00422 107 DWD 109 (394)
T ss_pred ccc
Confidence 973
No 128
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=67.28 E-value=20 Score=36.28 Aligned_cols=48 Identities=25% Similarity=0.495 Sum_probs=34.5
Q ss_pred ChHHHHHHHHhcCCc----eEEEeccccc--cCeE-EEcCceEEEE---EccCCCCCCC
Q psy5889 229 GADMVHEFLKKFNID----LVCRAHQVVE--EGYE-FFADKKLVTL---FSAPNYCGEF 277 (326)
Q Consensus 229 g~~~~~~fl~~~~l~----~iIRgH~~~~--~G~~-~~~~~~~iTv---fSa~~y~~~~ 277 (326)
.++..++.|+..|++ .||-||+||. +|-. +-++|++|-| ||- .|..++
T Consensus 514 de~ic~kil~eFGLdpe~ghiINGHtPVke~~GE~PIKAngKliVIDGGFsk-AYqs~T 571 (648)
T COG3855 514 DEEICRKILEEFGLDPEGGHIINGHTPVKEKNGENPIKANGKLIVIDGGFSK-AYQSTT 571 (648)
T ss_pred hHHHHHHHHHHhCCCcccCceecCCCcccccCCCCCccCCCeEEEEcCchhh-hhhccc
Confidence 345678899999987 8999999996 3433 3478898888 554 354443
No 129
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=66.86 E-value=10 Score=39.26 Aligned_cols=40 Identities=23% Similarity=0.157 Sum_probs=25.7
Q ss_pred CCceEEEeccccCCCCCc-----HHHHHHHHHhhhcCCCcEEEECCCchh
Q psy5889 84 PTSTYLFLGDYVDRGKHS-----IETICLLFAYKIRYPDNIYLLRGNHES 128 (326)
Q Consensus 84 ~~~~~vfLGD~VDRG~~s-----~evl~lL~~lk~~~p~~v~llrGNHE~ 128 (326)
++.-++..||.+...+.+ ...+.++-++.. -....||||.
T Consensus 49 ~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~g~-----Da~~lGNHEF 93 (550)
T TIGR01530 49 KNALVLHAGDAIIGTLYFTLFGGRADAALMNAAGF-----DFFTLGNHEF 93 (550)
T ss_pred CCeEEEECCCCCCCccchhhcCCHHHHHHHhccCC-----CEEEeccccc
Confidence 344566799999765432 334555555543 3588999996
No 130
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=66.14 E-value=7 Score=40.34 Aligned_cols=68 Identities=18% Similarity=0.077 Sum_probs=38.3
Q ss_pred cCCeeEEecCCCCHHH----------HHHhHHcCC-----CCCCceEEEeccccCCCCCc-----HHHHHHHHHhhhcCC
Q psy5889 57 TTPLKICGDIHGQYND----------LLGLFSYGK-----PPPTSTYLFLGDYVDRGKHS-----IETICLLFAYKIRYP 116 (326)
Q Consensus 57 ~~~i~viGDIHG~~~~----------L~~il~~~g-----~~~~~~~vfLGD~VDRG~~s-----~evl~lL~~lk~~~p 116 (326)
+-.|+-+.|+||++.. +..+++... ..+..-++.-||.+...+.+ .-++.++-.+..
T Consensus 34 ~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g~--- 110 (551)
T PRK09558 34 KITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIGY--- 110 (551)
T ss_pred EEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCCC---
Confidence 3468899999998741 223333221 12344566689998643322 234455555442
Q ss_pred CcEEEECCCchhh
Q psy5889 117 DNIYLLRGNHESA 129 (326)
Q Consensus 117 ~~v~llrGNHE~~ 129 (326)
.+ ...||||.-
T Consensus 111 -Da-~tlGNHEFD 121 (551)
T PRK09558 111 -DA-MAVGNHEFD 121 (551)
T ss_pred -CE-EcccccccC
Confidence 33 445999973
No 131
>PF14164 YqzH: YqzH-like protein
Probab=61.33 E-value=29 Score=25.39 Aligned_cols=46 Identities=11% Similarity=0.146 Sum_probs=38.0
Q ss_pred CChhhHHHHHHHHHcCCC-CCccccCCHHHHHHHHHHHHHHHHhCCC
Q psy5889 7 INQESLDNVIKKLSRGVR-PGRMINLDQADIVIMIRAARDIFMAQPM 52 (326)
Q Consensus 7 ~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~il~~ep~ 52 (326)
|++.-|+++|.+.+++-. ...-.+|++.|...|++.....-.++|.
T Consensus 1 M~ek~I~Kmi~~~l~QYg~d~~~~pls~~E~~~L~~~i~~~~~~~~~ 47 (64)
T PF14164_consen 1 MNEKLIEKMIINCLRQYGYDVECMPLSDEEWEELCKHIQERKNEEPD 47 (64)
T ss_pred CcHHHHHHHHHHHHHHhCCcccCCCCCHHHHHHHHHHHHHHHhcCCC
Confidence 677788999999888632 2345689999999999999999999986
No 132
>COG0634 Hpt Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]
Probab=55.38 E-value=91 Score=27.50 Aligned_cols=86 Identities=15% Similarity=0.137 Sum_probs=61.8
Q ss_pred ccccCCHHHHHHHHHHHHHHHHhCCCceeecCCeeEEecCCCCHHHHHHhHHcCCCCC----------------------
Q psy5889 27 RMINLDQADIVIMIRAARDIFMAQPMFLYLTTPLKICGDIHGQYNDLLGLFSYGKPPP---------------------- 84 (326)
Q Consensus 27 ~~~~~~~~~~~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~il~~~g~~~---------------------- 84 (326)
..+.++++++.+-+++..+.+.++.. ....++||=++|++--+-.++..+.++.
T Consensus 8 ~evLisee~I~~ri~ela~~I~~~y~----g~~~~vv~iLkGs~~F~~dL~r~i~~~~e~dFm~vSSYg~~t~ssg~v~i 83 (178)
T COG0634 8 KEVLISEEQIKARIKELAAQITEDYG----GKDPLVVGVLKGSFPFMADLIRAIDFPLEVDFMHVSSYGGGTSSSGEVKI 83 (178)
T ss_pred ceEeeCHHHHHHHHHHHHHHHHHhhC----CCceEEEEEcccchhhHHHHHHhcCCCceeEEEEEeccCCCcccCCceEE
Confidence 34689999999999999988888654 2677899999999987777776654432
Q ss_pred ---------CceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcE
Q psy5889 85 ---------TSTYLFLGDYVDRGKHSIETICLLFAYKIRYPDNI 119 (326)
Q Consensus 85 ---------~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v 119 (326)
...++.+=|++|-|.-=-.+.++|. .+-|..+
T Consensus 84 ~kDld~di~grdVLiVeDIiDsG~TLs~i~~~l~---~r~a~sv 124 (178)
T COG0634 84 LKDLDEDIKGRDVLIVEDIIDSGLTLSKVRDLLK---ERGAKSV 124 (178)
T ss_pred ecccccCCCCCeEEEEecccccChhHHHHHHHHH---hCCCCeE
Confidence 1458889999998874444444443 3345444
No 133
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=54.54 E-value=14 Score=39.86 Aligned_cols=67 Identities=19% Similarity=0.131 Sum_probs=40.2
Q ss_pred cCCeeEEecCCCCHHH----------------HHHhHHcCCC-CCCceEEEeccccCCCCCc------------------
Q psy5889 57 TTPLKICGDIHGQYND----------------LLGLFSYGKP-PPTSTYLFLGDYVDRGKHS------------------ 101 (326)
Q Consensus 57 ~~~i~viGDIHG~~~~----------------L~~il~~~g~-~~~~~~vfLGD~VDRG~~s------------------ 101 (326)
.-+|+-..|+||++.. +..++++... .++..+|-.||++---+.+
T Consensus 39 ~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~~ 118 (780)
T PRK09418 39 NLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPSY 118 (780)
T ss_pred EEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhccccccccccccc
Confidence 4578999999998632 2223333211 1334566689988543321
Q ss_pred -HHHHHHHHHhhhcCCCcEEEECCCchh
Q psy5889 102 -IETICLLFAYKIRYPDNIYLLRGNHES 128 (326)
Q Consensus 102 -~evl~lL~~lk~~~p~~v~llrGNHE~ 128 (326)
.-++.++-.|... ....||||.
T Consensus 119 ~~p~i~~mN~lgyD-----a~tlGNHEF 141 (780)
T PRK09418 119 THPLYRLMNLMKYD-----VISLGNHEF 141 (780)
T ss_pred chHHHHHHhccCCC-----EEecccccc
Confidence 2356666665533 588999995
No 134
>KOG2679|consensus
Probab=53.11 E-value=7.5 Score=36.72 Aligned_cols=67 Identities=25% Similarity=0.349 Sum_probs=0.0
Q ss_pred CeeEEec--CCCCHHHHHHhHHcCCCCCC---ceEEEecccc-CCCC---------CcHHHHHHHHHhhhcCCCcEEEEC
Q psy5889 59 PLKICGD--IHGQYNDLLGLFSYGKPPPT---STYLFLGDYV-DRGK---------HSIETICLLFAYKIRYPDNIYLLR 123 (326)
Q Consensus 59 ~i~viGD--IHG~~~~L~~il~~~g~~~~---~~~vfLGD~V-DRG~---------~s~evl~lL~~lk~~~p~~v~llr 123 (326)
+++|||| .+|.+..-+..++.....+. +-+|-+||=+ |-|. .+.|-+.---+|+ ...+.+.
T Consensus 45 sflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQ----kpWy~vl 120 (336)
T KOG2679|consen 45 SFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQ----KPWYSVL 120 (336)
T ss_pred EEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCcccc----cchhhhc
Q ss_pred CCchhh
Q psy5889 124 GNHESA 129 (326)
Q Consensus 124 GNHE~~ 129 (326)
||||.+
T Consensus 121 GNHDyr 126 (336)
T KOG2679|consen 121 GNHDYR 126 (336)
T ss_pred cCcccc
No 135
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=46.25 E-value=95 Score=26.70 Aligned_cols=102 Identities=18% Similarity=0.276 Sum_probs=58.8
Q ss_pred eEEecCCCCHHHHHHhHH-cCCC------------CCCceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCch
Q psy5889 61 KICGDIHGQYNDLLGLFS-YGKP------------PPTSTYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHE 127 (326)
Q Consensus 61 ~viGDIHG~~~~L~~il~-~~g~------------~~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE 127 (326)
++.+-.+||-..+-+.+. .++. .+...+||+|-.+|+|.-+-++..+|-.|+ +.+|++. |-
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~---~KkV~lF-~T-- 75 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLK---GKKVALF-GT-- 75 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHcc---CCeEEEE-Ee--
Confidence 455556677666654332 2222 233569999999999999999999998875 3455432 21
Q ss_pred hhhhhhhhCchHHHHHHhhHHHHHHHHhhhccCceEEEEcCeEEEecCCCCCCC
Q psy5889 128 SANINKIYGFYEECKRRYDIKLWKKFTDCFNCMPVAAVVDHKIFCCHGGLSPQL 181 (326)
Q Consensus 128 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP~~~~i~~~il~vHgGi~p~~ 181 (326)
.|+.. ...|...+.+....++..= ..+-+ .|+|+|-++|.+
T Consensus 76 -------~G~~~--~s~~~~~~~~~~~~~~~~~---~~~lg-~f~CqGk~~~~~ 116 (160)
T PF12641_consen 76 -------AGAGP--DSEYAKKILKNVEALLPKG---NEILG-TFMCQGKMDPKV 116 (160)
T ss_pred -------cCCCC--chHHHHHHHHHHHHhhccC---Ceecc-eEEeCCcCCHHH
Confidence 12211 1222333444444444332 22223 677899998865
No 136
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=45.08 E-value=59 Score=24.55 Aligned_cols=69 Identities=14% Similarity=0.102 Sum_probs=45.8
Q ss_pred CCeeEEecCCCCHHHHHHhHHcCCC--CCCceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCc
Q psy5889 58 TPLKICGDIHGQYNDLLGLFSYGKP--PPTSTYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNH 126 (326)
Q Consensus 58 ~~i~viGDIHG~~~~L~~il~~~g~--~~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNH 126 (326)
..+.||=|---+.+.+..+++.+.. +....++.+|+.-|+|..+.+....+-.+...+...+++...|+
T Consensus 12 ~~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 82 (91)
T PF02875_consen 12 NGPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDNP 82 (91)
T ss_dssp TTEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSBT
T ss_pred CCcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCCC
Confidence 4577888866688888887776532 34556778999999888887766666666555566666655554
No 137
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=41.00 E-value=25 Score=36.88 Aligned_cols=41 Identities=24% Similarity=0.409 Sum_probs=35.5
Q ss_pred ceEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECCCchhhhh
Q psy5889 86 STYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRGNHESANI 131 (326)
Q Consensus 86 ~~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrGNHE~~~~ 131 (326)
+++-.+||+.||||.+-.+++.|+.. .+|=+-.||||-..+
T Consensus 186 DhLHIvGDIyDRGp~pd~ImD~Lm~~-----hsvDIQWGNHDIlWM 226 (640)
T PF06874_consen 186 DHLHIVGDIYDRGPRPDKIMDRLMNY-----HSVDIQWGNHDILWM 226 (640)
T ss_pred hheeecccccCCCCChhHHHHHHhcC-----CCccccccchHHHHH
Confidence 56778999999999999999999864 377789999998776
No 138
>COG5526 Lysozyme family protein [General function prediction only]
Probab=37.47 E-value=63 Score=27.93 Aligned_cols=63 Identities=17% Similarity=0.212 Sum_probs=49.2
Q ss_pred CccCCCCChhhHHHHHHHHHcCCCCCccccCCHHHHHHHHHHHHHHHHhCCCceeec----CCeeEEecCCCC
Q psy5889 1 MASHGAINQESLDNVIKKLSRGVRPGRMINLDQADIVIMIRAARDIFMAQPMFLYLT----TPLKICGDIHGQ 69 (326)
Q Consensus 1 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~il~~ep~~l~i~----~~i~viGDIHG~ 69 (326)
|++-+|-.-+.+.+-.+|+.+.+ .+.++-+..+-..++.|+...|.-..+. -|-++||=||-.
T Consensus 1 ~~s~~~~~l~~lk~eY~rlw~~c------qiRpewa~~vkk~~k~ila~k~rYe~i~sqT~iPW~fiG~iH~~ 67 (191)
T COG5526 1 MQSINMGLLDELKEEYERLWEKC------QIRPEWASVVKKEAKRILAGKPRYEQIESQTGIPWWFIGLIHYR 67 (191)
T ss_pred CcchhhhhHHHHHHHHHHHHHHh------ccCHHHHHHHHHHHHHHhcCCccchhhhcccCCCeeeeehhhhh
Confidence 56666666677888888888864 4778888888899999999988776664 478999999863
No 139
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=34.81 E-value=27 Score=32.75 Aligned_cols=39 Identities=23% Similarity=0.440 Sum_probs=25.0
Q ss_pred eEEEeccccCCCCCcHHHH-HHHHHhhhcCCCcEEEECCCchhh
Q psy5889 87 TYLFLGDYVDRGKHSIETI-CLLFAYKIRYPDNIYLLRGNHESA 129 (326)
Q Consensus 87 ~~vfLGD~VDRG~~s~evl-~lL~~lk~~~p~~v~llrGNHE~~ 129 (326)
+++|+||+|.+ ...+.+ ..|-.+|.+++..+.+. |-|..
T Consensus 2 ~ilfiGDi~G~--~Gr~~l~~~L~~lk~~~~~D~vIa--NgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVYGK--AGRKIVKNNLPQLKSKYQADLVIA--NGENT 41 (266)
T ss_pred eEEEEEecCCH--HHHHHHHHHHHHHHHhCCCCEEEE--cCccc
Confidence 68999999944 333433 56667787777665444 44543
No 140
>KOG2310|consensus
Probab=31.62 E-value=1.1e+02 Score=31.83 Aligned_cols=49 Identities=16% Similarity=0.215 Sum_probs=38.2
Q ss_pred CCeeEEecCCC------------CHHHHHHhHHcCCCCCCceEEEeccccCCCCCcHHHHH
Q psy5889 58 TPLKICGDIHG------------QYNDLLGLFSYGKPPPTSTYLFLGDYVDRGKHSIETIC 106 (326)
Q Consensus 58 ~~i~viGDIHG------------~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~ 106 (326)
.+|.|-.|+|= .|..+..+|+.+.-...+-++.=||++.--.-|.++|.
T Consensus 14 irILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~ 74 (646)
T KOG2310|consen 14 IRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLH 74 (646)
T ss_pred eEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHH
Confidence 47889999983 57788889888776667778888999987776766553
No 141
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=27.99 E-value=1.2e+02 Score=27.34 Aligned_cols=40 Identities=25% Similarity=0.328 Sum_probs=29.3
Q ss_pred HHHHHHhcCCceEEEeccccccCeEEEcCceEEEEEccCCCC
Q psy5889 233 VHEFLKKFNIDLVCRAHQVVEEGYEFFADKKLVTLFSAPNYC 274 (326)
Q Consensus 233 ~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTvfSa~~y~ 274 (326)
+.+.|-..|+++||-||..+..+++... +++| +||-=|+.
T Consensus 197 ~A~~l~~~G~DvIiG~H~H~~~~~e~~~-~~~I-~YslGNfi 236 (239)
T smart00854 197 LAHALIDAGADVVIGHHPHVLQPIEIYK-GKLI-AYSLGNFI 236 (239)
T ss_pred HHHHHHHcCCCEEEcCCCCcCCceEEEC-CEEE-EEcccccc
Confidence 4444444799999999999999998864 5555 67765553
No 142
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=27.71 E-value=60 Score=30.19 Aligned_cols=37 Identities=24% Similarity=0.309 Sum_probs=25.1
Q ss_pred eEEEeccccCCCCCcHHHHHHHHHhhhcCCCcEEEECC
Q psy5889 87 TYLFLGDYVDRGKHSIETICLLFAYKIRYPDNIYLLRG 124 (326)
Q Consensus 87 ~~vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~llrG 124 (326)
+++|+||+|.+.-. .-+...|-.+|.+++..+.+.-|
T Consensus 1 ~ilfigdi~g~~G~-~~~~~~l~~lk~~~~~D~vi~Ng 37 (255)
T cd07382 1 KILFIGDIVGKPGR-KAVKEHLPKLKKEYKIDFVIANG 37 (255)
T ss_pred CEEEEEeCCCHHHH-HHHHHHHHHHHHHCCCCEEEECC
Confidence 47999999976432 24556677788788766555544
No 143
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=26.31 E-value=1.9e+02 Score=28.91 Aligned_cols=66 Identities=12% Similarity=0.044 Sum_probs=46.3
Q ss_pred CCeeEEecCCC-CHHHHHHhHHcCCCCCCceEEEeccccCCCCCcHHHHHHHHHhhhcC-CCcEEEECC
Q psy5889 58 TPLKICGDIHG-QYNDLLGLFSYGKPPPTSTYLFLGDYVDRGKHSIETICLLFAYKIRY-PDNIYLLRG 124 (326)
Q Consensus 58 ~~i~viGDIHG-~~~~L~~il~~~g~~~~~~~vfLGD~VDRG~~s~evl~lL~~lk~~~-p~~v~llrG 124 (326)
..++||=|-|. +.+.+..+++.+...+..+++.+||+...|+.+.+...-+..+-... .+.++++ |
T Consensus 325 ~g~~iIDDsYn~nP~s~~aaL~~l~~~~~r~i~VlG~m~elG~~~~~~h~~~~~~~~~~~~d~v~~~-G 392 (453)
T PRK10773 325 EGQLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVLSV-G 392 (453)
T ss_pred CCeEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEECChhhcchHHHHHHHHHHHHHHHcCCCEEEEE-C
Confidence 45789999665 67777777766543344578889999999999988877766544333 3555544 6
No 144
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.21 E-value=48 Score=32.15 Aligned_cols=59 Identities=20% Similarity=0.352 Sum_probs=38.7
Q ss_pred HHhCCCceeecCCeeEEecCC-CCHHHHHHhHHcCCCCCCceEEE-eccccC--CCCCcHHHHHHHHHhhh
Q psy5889 47 FMAQPMFLYLTTPLKICGDIH-GQYNDLLGLFSYGKPPPTSTYLF-LGDYVD--RGKHSIETICLLFAYKI 113 (326)
Q Consensus 47 l~~ep~~l~i~~~i~viGDIH-G~~~~L~~il~~~g~~~~~~~vf-LGD~VD--RG~~s~evl~lL~~lk~ 113 (326)
++..|-.++-.+.++++||.| |||.++... +..++| +-|+=. -|+....++.++.+|..
T Consensus 46 ~~~~p~~lp~~p~tw~cGD~HLgN~ga~~~~--------~G~V~f~i~DFDe~~~g~~~~DlvRl~~Sl~~ 108 (410)
T COG4320 46 MKTWPWSLPKTPFTWLCGDAHLGNFGAARNS--------KGNVVFKIADFDEGHLGQYIWDLVRLAVSLVL 108 (410)
T ss_pred HhcCccccCCCCceEEecccccccchhhccC--------CCceEEEecccchhhccchHHHHHHHHHHHHH
Confidence 455666677778899999999 777776542 223444 555422 36677788888777754
No 145
>PF15007 CEP44: Centrosomal spindle body, CEP44
Probab=24.01 E-value=1.1e+02 Score=25.68 Aligned_cols=83 Identities=24% Similarity=0.353 Sum_probs=45.1
Q ss_pred cCCCCHHHHHHhHHcCCCCCCceE--EEeccccCCCCCcHHHHHHHHHhhhcCCCcEE--EECCCchhhhhhhhhCchHH
Q psy5889 65 DIHGQYNDLLGLFSYGKPPPTSTY--LFLGDYVDRGKHSIETICLLFAYKIRYPDNIY--LLRGNHESANINKIYGFYEE 140 (326)
Q Consensus 65 DIHG~~~~L~~il~~~g~~~~~~~--vfLGD~VDRG~~s~evl~lL~~lk~~~p~~v~--llrGNHE~~~~~~~~gf~~e 140 (326)
|+.|++..|.+.|+.+++|..-.+ +-.|| +...+.++-..-+.|+..|. ++.=++|. ...
T Consensus 1 Dl~~~l~~L~~~Lr~~~yp~~vd~~~l~~G~-------p~afLpil~~~L~~yS~~va~~l~~~g~eL---------~~k 64 (131)
T PF15007_consen 1 DLKGNLRRLEQELRSLKYPDEVDYQGLYKGD-------PSAFLPILHYALLSYSTHVARLLVDRGYEL---------YGK 64 (131)
T ss_pred ChhhHHHHHHHHHHHCCCCCccCHHHHhcCC-------HHHHHHHHHHHHHcCCHHHHHHHHHcCchh---------hcC
Confidence 899999999999999999843221 22333 22222222222234443332 22222221 112
Q ss_pred HHHHhhHHHHHHHHhhhccCceE
Q psy5889 141 CKRRYDIKLWKKFTDCFNCMPVA 163 (326)
Q Consensus 141 ~~~~~~~~~~~~~~~~f~~LP~~ 163 (326)
.-.+|-+.+|+.+.+.|.+-|..
T Consensus 65 ~D~RF~E~vyk~LRdef~YkP~l 87 (131)
T PF15007_consen 65 NDLRFVESVYKLLRDEFNYKPSL 87 (131)
T ss_pred ChHHHHHHHHHHHHHHhCCCCCC
Confidence 23355667777777777777654
No 146
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=23.82 E-value=2.9e+02 Score=25.72 Aligned_cols=59 Identities=20% Similarity=0.247 Sum_probs=31.9
Q ss_pred CCcEEEECCCchhhhhhhhhCchHHHHHHh-hHHHHHHHHhhhccCceEEEEc-CeEEEecCCCCCC
Q psy5889 116 PDNIYLLRGNHESANINKIYGFYEECKRRY-DIKLWKKFTDCFNCMPVAAVVD-HKIFCCHGGLSPQ 180 (326)
Q Consensus 116 p~~v~llrGNHE~~~~~~~~gf~~e~~~~~-~~~~~~~~~~~f~~LP~~~~i~-~~il~vHgGi~p~ 180 (326)
.++|++|-||||.-. +..|.-. -...+. ..+- -..+..+|++-.-. .+++..|-||..+
T Consensus 127 nknvvvlagnhein~-ngny~ar-lanhkls~gDT----YnlIKtldVC~YD~erkvltsHHGIird 187 (318)
T PF13258_consen 127 NKNVVVLAGNHEINF-NGNYMAR-LANHKLSAGDT----YNLIKTLDVCNYDPERKVLTSHHGIIRD 187 (318)
T ss_pred ccceEEEecCceecc-CchHHHH-HhhCCCCccch----hhccccccccccCcchhhhhcccCceec
Confidence 468999999999842 2222100 000111 1111 23456677775533 3688888888643
No 147
>PHA02762 hypothetical protein; Provisional
Probab=21.67 E-value=2.9e+02 Score=19.50 Aligned_cols=23 Identities=30% Similarity=0.367 Sum_probs=19.2
Q ss_pred EEEEcCCCceEEEEEecCCcccc
Q psy5889 283 MMIVDENLTCSFHIMKPKKKILE 305 (326)
Q Consensus 283 vl~i~~~~~~~~~~~~~~~~~~~ 305 (326)
.+-+|+++.+.++.++|..|..+
T Consensus 31 tigide~g~iayisiep~dkdl~ 53 (62)
T PHA02762 31 TIGIDENDKISYISIEPLDKDLK 53 (62)
T ss_pred EEeECCCCcEEEEEecccchHHH
Confidence 35579999999999999987754
Done!